Citrus Sinensis ID: 005236

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700------
Protein Sequence
MGALSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLPVCQCLKGFKPKSRGYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR
Secondary Structure (PSIPRED)
ccccEEEEEEEcccEEEEEccccccccEEEEEccccccccccccEEEEEEccccEEEEEEcccccccccccEEEEEEcccccEEEEEEccEEEEEEEcccccEEEEEcccccccEEEEEEEEccEEEEEEEEccccEEEEEEEcccccEEEEEEEccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccEEEEcccccccccccEEcccccHHHHHHHHHHcccccccccccccccccEEEEEEcccccEEEcccccccEEEEEcccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEEccccEEEEEEccccccHHHHHHHHHHHHHHHccccccccEEcccccccEEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccccccccccccccccccccccccccccccEEEEEcccccHHHHcccccccccccccccEEEEEEEEcccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccEEEccccccccccccccccccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccEEEEEccccEEEEEccccccccEEEEEccccccccccccEccccccccccEEEEEcccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEcccccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEccccEEEEEEEEEcccccEEEEEEccccccccHcccccccEEccccccccccccccccccHHHcccccccEEcccccccccccEEEEccccccccccEEEcccccHHHHHHHHHHcccEEEEEEEcccccccEEEEEEccHHHHHHcccccccEEEEEccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEcHHHHHHHHcccccccccccccccccEccEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccHHHcccHccccccHHHHHHHHHHHHHHHHHHHHccHccEEcccccHHHEEEcccccEEEccHHHcEEccHHcccccccEEEEEccHccHHHHHHcEEcHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccccHHHHcHHHcccccHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccccccEEEEccccccccccccccccccccEEEEEEEccc
Coil and Loop (DISEMBL)
MGALSFLFVCYsgnlvlrgerdggsetylwqsfdypsdtllpgmklgwDLKTGLErritswkspddpspgnftwaverqdnpelimwkgsrkfyrsgpwnglrFSAAtlrqnpvfnfsfvssedelyytfdlIDKAVFSRIVMNQTLYLRQRFTWKKATQNwelqlnvprdlcdtyalcgdygiciisdlpvcqclkgfkpksrgyvdwsqgcvrdkslnysredgfikftamklpdatpswvsksmnlKECRekclensscmaytnsdirgggsgcamwfgelidmrdfpdggqdLYIRMSaselgakgeptTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRenrnnrgteqknedqnidldlplFELATIAnatdnfsinkklgeggfgpvykgtlaDEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIyefmpnksldsfifDQERCKLLDWSKRFHIICGTArgllylhqdSRLRIIHRDLKASnvlldqdmnpkisdfglarafggdetegntnrvvgtygymapeyasdgqfsvksdVFSFGILLLEIVSgkknrgfyhsdnKLNLIRHAWKLWnegmpsqliDACFKDSFNLAEVIRCIHIGLLcvqqypedrpcmpsVILMLGseivlpqpkqpgyladrkstrldsslsmpessstntitiselegr
Flexible Loop (DISEMBL)
MGALSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRitswkspddpspgnfTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLPVCQCLKGfkpksrgyvdwsqgcvrdkslnysREDGFIKFTamklpdatpswvsksmNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAgylihksrrniVVNIARYFRenrnnrgteqknedqnidLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARafggdetegntnRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGkknrgfyhsDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGYLADRKSTRldsslsmpessstntitiselegr
Low Complexity Region (SEG)
MGALSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLPVCQCLKGFKPKSRGYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGYLADRKSTRLDsslsmpessstntitisELEGR
Disordered region (IsUnstruct)
***LSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSW*********NFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLPVCQCLKGFKPKSRGYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFR****************IDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVL****************************************
Disordered Region (DISOPRED)
**ALSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLPVCQCLKGFKPKSRGYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIR*********GEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNI***************************LDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGYL**********************ITISELEGR
Disordered Region (DISEMBL)
MGALSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLPVCQCLKGFKPKSRGYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGYLADRK***************************
Disordered Region (DISPRO)
**ALSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLPVCQCLKGFKPKSRGYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIA*********************DLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGYLADR**************SSTNTITISELEG*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGALSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLPVCQCLKGFKPKSRGYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	706	2.2.26 [Sep-21-2011]
O81905	850	Receptor-like serine/thre	yes	no	0.983	0.816	0.510	0.0
O81832	783	G-type lectin S-receptor-	no	no	0.915	0.825	0.500	0.0
O81833	815	G-type lectin S-receptor-	no	no	0.957	0.829	0.516	0.0
Q39086	843	Receptor-like serine/thre	no	no	0.974	0.816	0.497	0.0
Q9S972	847	Receptor-like serine/thre	no	no	0.981	0.818	0.482	0.0
Q09092	857	Putative serine/threonine	N/A	no	0.975	0.803	0.463	0.0
Q9LPZ3	845	G-type lectin S-receptor-	no	no	0.971	0.811	0.459	1e-174
P0DH86	853	G-type lectin S-receptor-	no	no	0.980	0.811	0.482	1e-174
Q9ZT07	833	G-type lectin S-receptor-	no	no	0.953	0.807	0.454	1e-174
Q9SXB8	842	G-type lectin S-receptor-	no	no	0.968	0.812	0.434	1e-164

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  699 bits (1805), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/717 (51%), Positives = 471/717 (65%), Gaps = 23/717 (3%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           +GN VLR  ++   +  LWQSFD+P+DTLLP MKLGWD KTG  R I SWKSPDDPS G+
Sbjct: 135 NGNFVLRDSKNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSSGD 194

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQN-PVFNFSFVSSEDELYYTF 130
           F++ +E +  PE+ +W    + YRSGPWNG+RFS     Q      F+F +S++E+ Y+F
Sbjct: 195 FSFKLETEGFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMVFNFTTSKEEVTYSF 254

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
            +    V+SR+ ++ +  L QRFTW +  QNW      P+D CD Y  CG YG C  +  
Sbjct: 255 RITKSDVYSRLSISSSGLL-QRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSNTS 313

Query: 191 PVCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSM 247
           PVC C+KGFKP++    G  D S GCVR   L+    DGF++   MKLPD T + V + +
Sbjct: 314 PVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTTASVDRGI 373

Query: 248 NLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELG 307
            +KEC +KCL + +C A+ N+DIRG GSGC  W GEL D+R++  GGQDLY+R++A++L 
Sbjct: 374 GVKECEQKCLRDCNCTAFANTDIRGSGSGCVTWTGELFDIRNYAKGGQDLYVRLAATDLE 433

Query: 308 AKGEPTTKIVLIVISTAALLAVVIAAGYLI-HKSRRNIVVN--IARYFRENRNNRGTEQ- 363
            K   + KI+   I  + LL +     +L   K +R+I++   I  +   +R+    E  
Sbjct: 434 DKRNRSAKIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILIETPIVDHQLRSRDLLMNEVV 493

Query: 364 -------KNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAV 416
                    E+   DL+LPL E   +A AT+NFS   KLG+GGFG VYKG L D QE+AV
Sbjct: 494 ISSRRHISRENNTDDLELPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQEMAV 553

Query: 417 KRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD 476
           KRLSK S QG  E KNE+ L ++LQH NLV+LL CC+   EK+LIYE++ N SLDS +FD
Sbjct: 554 KRLSKTSVQGTDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFD 613

Query: 477 QERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 536
           + R   L+W  RF II G ARGLLYLHQDSR RIIHRDLKASN+LLD+ M PKISDFG+A
Sbjct: 614 KSRNSKLNWQMRFDIINGIARGLLYLHQDSRFRIIHRDLKASNILLDKYMTPKISDFGMA 673

Query: 537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS 596
           R FG DETE NT +VVGTYGYM+PEYA DG FS+KSDVFSFG+LLLEI+S K+N+GFY+S
Sbjct: 674 RIFGRDETEANTRKVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISSKRNKGFYNS 733

Query: 597 DNKLNLIRHAWKLWNEGMPSQLIDACFKDS---FNLAEVIRCIHIGLLCVQQYPEDRPCM 653
           D  LNL+   W+ W EG   ++ID    DS   F   E++RCI IGLLCVQ+  EDRP M
Sbjct: 734 DRDLNLLGCVWRNWKEGKGLEIIDPIITDSSSTFRQHEILRCIQIGLLCVQERAEDRPTM 793

Query: 654 PSVILMLGSE-IVLPQPKQPGYLADRKSTRLDSSLSMP---ESSSTNTITISELEGR 706
             VILMLGSE   +PQPK PGY  +R     DSS S     ES + N IT+S L+ R
Sbjct: 794 SLVILMLGSESTTIPQPKAPGYCLERSLLDTDSSSSKQRDDESWTVNQITVSVLDAR 850

Involved in the regulation of cellular expansion and differentiation.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/701 (50%), Positives = 470/701 (67%), Gaps = 55/701 (7%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           +GNLV+R    G  + Y+WQS DYP D  LPGMK G +  TGL R +TSW++ DDPS GN
Sbjct: 132 TGNLVVRNS--GDDQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAIDDPSTGN 189

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSA-ATLRQNPVFNFSFVSSEDELYYTF 130
           +T  ++    P+  + K S   +R+GPWNGLRF+    L+ NP++ + +V +E+E+YYT+
Sbjct: 190 YTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIYRYEYVFTEEEVYYTY 249

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
            L + +V +R+ +N    L QR+TW    Q+W   L+   D CD Y LCG YG C I++ 
Sbjct: 250 KLENPSVLTRMQLNPNGAL-QRYTWVDNLQSWNFYLSAMMDSCDQYTLCGSYGSCNINES 308

Query: 191 PVCQCLKGFKPKS-RGYV--DWSQGCVRDKSLNYSR-EDGFIKFTAMKLPDATPSWVSKS 246
           P C+CLKGF  K+ + +V  DWS+GCVR   L+  + EDGF+K + +KLPD   SW  K+
Sbjct: 309 PACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLPDTRTSWYDKN 368

Query: 247 MNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEL 306
           M+L EC++ CL N +C AY+  DIR GG GC +WFG+LID+R++ + GQDLY+R+++SE+
Sbjct: 369 MDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIREYNENGQDLYVRLASSEI 428

Query: 307 GAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNE 366
                 ++++                                            + +K E
Sbjct: 429 ETLQRESSRV--------------------------------------------SSRKQE 444

Query: 367 DQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG 426
           ++  DL+LP  +L T++ AT  FS   KLG+GGFGPVYKGTLA  QE+AVKRLS+ S QG
Sbjct: 445 EE--DLELPFLDLDTVSEATSGFSAGNKLGQGGFGPVYKGTLACGQEVAVKRLSRTSRQG 502

Query: 427 LKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWS 486
           ++E KNEI L +KLQHRNLVK+LG C+  EE++LIYE+ PNKSLDSFIFD+ER + LDW 
Sbjct: 503 VEEFKNEIKLIAKLQHRNLVKILGYCVDEEERMLIYEYQPNKSLDSFIFDKERRRELDWP 562

Query: 487 KRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 546
           KR  II G ARG+LYLH+DSRLRIIHRDLKASNVLLD DMN KISDFGLAR  GGDETE 
Sbjct: 563 KRVEIIKGIARGMLYLHEDSRLRIIHRDLKASNVLLDSDMNAKISDFGLARTLGGDETEA 622

Query: 547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA 606
           NT RVVGTYGYM+PEY  DG FS+KSDVFSFG+L+LEIVSG++NRGF + ++KLNL+ HA
Sbjct: 623 NTTRVVGTYGYMSPEYQIDGYFSLKSDVFSFGVLVLEIVSGRRNRGFRNEEHKLNLLGHA 682

Query: 607 WKLWNEGMPSQLIDACFKDS-FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV 665
           W+ + E    ++ID    +S  +++EV+R IHIGLLCVQQ P+DRP M  V+LML SE++
Sbjct: 683 WRQFLEDKAYEIIDEAVNESCTDISEVLRVIHIGLLCVQQDPKDRPNMSVVVLMLSSEML 742

Query: 666 LPQPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
           L  P+QPG+  +R     D+     E  S N  T+S ++ R
Sbjct: 743 LLDPRQPGFFNERNLLFSDTVSINLEIPSNNFQTMSVIDPR 783

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/713 (51%), Positives = 478/713 (67%), Gaps = 37/713 (5%)

Query: 6   FLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPD 65
            L +  SGNL+       G E  LWQSFDYP +T+L GMKLG + KT +E  ++SWK+  
Sbjct: 128 LLKISCSGNLI----SSDGEEAVLWQSFDYPMNTILAGMKLGKNFKTQMEWSLSSWKTLK 183

Query: 66  DPSPGNFTWAVERQDNPELIMWKG--SRKFYRSGPWNGLRFSAATL--RQNPVFNFSFVS 121
           DPSPG+FT +++ +  P+LI+ K   S   YR G WNGL F+ A    R+N +F++ F S
Sbjct: 184 DPSPGDFTLSLDTRGLPQLILRKNGDSSYSYRLGSWNGLSFTGAPAMGRENSLFDYKFTS 243

Query: 122 SEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGD 181
           S  E+ Y++    + V SR+V+N T  L  RF   K  Q W L    P D CD Y++CG 
Sbjct: 244 SAQEVNYSWTPRHRIV-SRLVLNNTGKL-HRFIQSKQNQ-WILANTAPEDECDYYSICGA 300

Query: 182 YGICIIS--DLPVCQCLKGFKPKSRGYVDWSQG---CVRDKSLNYSREDGFIKFTAMKLP 236
           Y +C I+  + P C CL+GFKPKS    + S+G   CV +   N  ++D F+KF  +KLP
Sbjct: 301 YAVCGINSKNTPSCSCLQGFKPKSGRKWNISRGAYGCVHEIPTNCEKKDAFVKFPGLKLP 360

Query: 237 DATPSW--VSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGG 294
           D + SW      M L++C+ KC  N SC AY N+DIR GG GC +WFG+L+DMR++   G
Sbjct: 361 DTSWSWYDAKNEMTLEDCKIKCSSNCSCTAYANTDIREGGKGCLLWFGDLVDMREYSSFG 420

Query: 295 QDLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRE 354
           QD+YIRM  +++  KG     +V+  +   A++ VV+ A +     R+ I   + RY  E
Sbjct: 421 QDVYIRMGFAKIEFKGREVVGMVVGSVVAIAVVLVVVFACF-----RKKI---MKRYRGE 472

Query: 355 NRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEI 414
           N   +G E++      DLDLP+F+  TI+ ATD+FS    LG GGFGPVYKG L D QEI
Sbjct: 473 NFR-KGIEEE------DLDLPIFDRKTISIATDDFSYVNFLGRGGFGPVYKGKLEDGQEI 525

Query: 415 AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI 474
           AVKRLS  S QG++E KNE+ L +KLQHRNLV+LLGCCI GEE +LIYE+MPNKSLD FI
Sbjct: 526 AVKRLSANSGQGVEEFKNEVKLIAKLQHRNLVRLLGCCIQGEECMLIYEYMPNKSLDFFI 585

Query: 475 FDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 534
           FD+ R   LDW KR +II G ARG+LYLHQDSRLRIIHRDLKA NVLLD DMNPKISDFG
Sbjct: 586 FDERRSTELDWKKRMNIINGVARGILYLHQDSRLRIIHRDLKAGNVLLDNDMNPKISDFG 645

Query: 535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFY 594
           LA++FGGD++E +TNRVVGTYGYM PEYA DG FSVKSDVFSFG+L+LEI++GK NRGF 
Sbjct: 646 LAKSFGGDQSESSTNRVVGTYGYMPPEYAIDGHFSVKSDVFSFGVLVLEIITGKTNRGFR 705

Query: 595 HSDNKLNLIRHAWKLWNEGMP-SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM 653
           H+D+ LNL+ H WK+W E        +   +++  + EV+RCIH+ LLCVQQ PEDRP M
Sbjct: 706 HADHDLNLLGHVWKMWVEDREIEVPEEEWLEETSVIPEVLRCIHVALLCVQQKPEDRPTM 765

Query: 654 PSVILMLGSEIVLPQPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
            SV+LM GS+  LP P QPG+  +R    + SSLS+    S N ++I+ L+GR
Sbjct: 766 ASVVLMFGSDSSLPHPTQPGFFTNRNVPDISSSLSL---RSQNEVSITMLQGR 815

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/718 (49%), Positives = 475/718 (66%), Gaps = 30/718 (4%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           +GN +LR   +      LWQSFD+P+DTLL  MKLGWD KTG  R + SWK+ DDPS G 
Sbjct: 133 NGNFLLRDSNN----RLLWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGE 188

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAAT-LRQNPVFNFSFVSSEDELYYTF 130
           F+  +E  + PE  +       YRSGPWNG+RFS+     Q     ++F +S++E+ Y++
Sbjct: 189 FSTKLETSEFPEFYICSKESILYRSGPWNGMRFSSVPGTIQVDYMVYNFTASKEEVTYSY 248

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
            +    ++SR+ +N    L QR TW + TQ+W+     P+DLCD Y +CG++G C  + L
Sbjct: 249 RINKTNLYSRLYLNSAGLL-QRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCDSNSL 307

Query: 191 PVCQCLKGFKP---KSRGYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSM 247
           P C C+KGFKP   ++    D S GC+R   L+    DGF +   MKLPD T + V + +
Sbjct: 308 PNCYCIKGFKPVNEQAWDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTATIVDREI 367

Query: 248 NLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELG 307
            LK C+E+CLE+ +C A+ N+DIR GGSGC +W  E++DMR++  GGQDLY+R++A+EL 
Sbjct: 368 GLKVCKERCLEDCNCTAFANADIRNGGSGCVIWTREILDMRNYAKGGQDLYVRLAAAELE 427

Query: 308 AKGEPTTKIV--LIVISTAALLAVVIAAGYLIHKSRRNIVV---NIARYFRENR------ 356
            K     KI+   I +S   LL+ VI   +   K +R+I +   N+ +   ++       
Sbjct: 428 DKRIKNEKIIGSSIGVSILLLLSFVIFH-FWKRKQKRSITIQTPNVDQVRSQDSLINDVV 486

Query: 357 -NNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIA 415
            + RG   K E ++  L+LPL EL  +A AT+NFS + KLG+GGFG VYKG L D +EIA
Sbjct: 487 VSRRGYTSK-EKKSEYLELPLLELEALATATNNFSNDNKLGQGGFGIVYKGRLLDGKEIA 545

Query: 416 VKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF 475
           VKRLSK+S QG  E  NE+ L +KLQH NLV+LLGCC+   EK+LIYE++ N SLDS +F
Sbjct: 546 VKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLF 605

Query: 476 DQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL 535
           DQ R   L+W KRF II G ARGLLYLHQDSR RIIHRDLKASNVLLD++M PKISDFG+
Sbjct: 606 DQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGM 665

Query: 536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYH 595
           AR FG +ETE NT RVVGTYGYM+PEYA DG FS+KSDVFSFG+LLLEI+SGK+N+GFY+
Sbjct: 666 ARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYN 725

Query: 596 SDNKLNLIRHAWKLWNEGMPSQLIDACFKDS----FNLAEVIRCIHIGLLCVQQYPEDRP 651
           S+  LNL+   W+ W EG   +++D    DS    F   E++RCI IGLLCVQ+  EDRP
Sbjct: 726 SNRDLNLLGFVWRHWKEGNELEIVDPINIDSLSSKFPTHEILRCIQIGLLCVQERAEDRP 785

Query: 652 CMPSVILMLGSEIV-LPQPKQPGYLADRKSTRLDSSLSMP--ESSSTNTITISELEGR 706
            M SV++MLGSE   +PQPK+PG+   R     DSS S    +  + N IT+S ++ R
Sbjct: 786 VMSSVMVMLGSETTAIPQPKRPGFCIGRSPLEADSSSSTQRDDECTVNQITLSVIDAR 843

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/715 (48%), Positives = 465/715 (65%), Gaps = 22/715 (3%)

Query: 13  GNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTG-LERRITSWKSPDDPSPGN 71
           GN VLR  ++     +LWQSFD+P+DTLL  MK+GWD K+G   R + SWK+ DDPS G+
Sbjct: 134 GNFVLRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGD 193

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAAT-LRQNPVFNFSFVSSEDELYYTF 130
           F+  +     PE  ++      YRSGPW G RFS+   ++     + SF  +  ++ Y++
Sbjct: 194 FSTKLRTSGFPEFYIYNKESITYRSGPWLGNRFSSVPGMKPVDYIDNSFTENNQQVVYSY 253

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
            +    ++S + ++ T  L QR TW +A Q+W+     P+DLCD Y  CG+YG C  +  
Sbjct: 254 RVNKTNIYSILSLSSTGLL-QRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTS 312

Query: 191 PVCQCLKGFKP--KSRGYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMN 248
           P+C C+KGF+P  +     D S GCVR   L+    DGF++   M+LPD T + V K + 
Sbjct: 313 PICNCIKGFEPMNEQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGIG 372

Query: 249 LKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELGA 308
           LKEC E+CL+  +C A+ N+DIR GGSGC +W G L D+R++  GGQDLY+R++A +L  
Sbjct: 373 LKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYVRVAAGDLED 432

Query: 309 KGEPTTKIVLIVISTAALLAV-VIAAGYLIHKSRRNI-----VVNIAR----YFRENRNN 358
           K   + KI+   I  + LL +  I   +   K +R+I     +V++ R       E    
Sbjct: 433 KRIKSKKIIGSSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIVDLVRSQDSLMNELVKA 492

Query: 359 RGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKR 418
             +    E++   L+LPL E   +A AT+NFS + KLG+GGFG VYKG L D +EIAVKR
Sbjct: 493 SRSYTSKENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKR 552

Query: 419 LSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE 478
           LSK+S QG  E  NE+ L +KLQH NLV+LLGCC+   EK+LIYE++ N SLDS +FDQ 
Sbjct: 553 LSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQT 612

Query: 479 RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
           R   L+W KRF II G ARGLLYLHQDSR RIIHRDLKASNVLLD++M PKISDFG+AR 
Sbjct: 613 RSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARI 672

Query: 539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN 598
           FG +ETE NT RVVGTYGYM+PEYA DG FS+KSDVFSFG+LLLEI+SGK+N+GFY+S+ 
Sbjct: 673 FGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNSNR 732

Query: 599 KLNLIRHAWKLWNEGMPSQLIDACFKDS----FNLAEVIRCIHIGLLCVQQYPEDRPCMP 654
            LNL+   W+ W EG   +++D    D+    F   E++RCI IGLLCVQ+  EDRP M 
Sbjct: 733 DLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPVMS 792

Query: 655 SVILMLGSEIV-LPQPKQPGYLADRKSTRLDSSLSMP--ESSSTNTITISELEGR 706
           SV++MLGSE   +PQPK+PG+   R S  +DSS S    +  + N +T+S ++ R
Sbjct: 793 SVMVMLGSETTAIPQPKRPGFCVGRSSLEVDSSSSTQRDDECTVNQVTLSVIDAR 847

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/727 (46%), Positives = 466/727 (64%), Gaps = 38/727 (5%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           +GN V+R   +  +  YLWQSFDYP+DTLLP MKLG++LKTGL R +TSW+S DDPS GN
Sbjct: 137 NGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGN 196

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFN-FSFVSSEDELYYTF 130
           F++ +E Q  PE  + + +   +RSGPWNG+RFS     Q   +  ++F+ + +E+ YTF
Sbjct: 197 FSYKLETQSLPEFYLSRENFPMHRSGPWNGIRFSGIPEDQKLSYMVYNFIENNEEVAYTF 256

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRD-LCDTYALCGDYGICIISD 189
            + + + +SR+ +    Y  QR TW  + + W    + P D  CDTY +CG Y  C ++ 
Sbjct: 257 RMTNNSFYSRLTLISEGYF-QRLTWYPSIRIWNRFWSSPVDPQCDTYIMCGPYAYCDVNT 315

Query: 190 LPVCQCLKGFKPKSRGYVD---WSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKS 246
            PVC C++GF P++    D   W+ GC+R   L+ S  DGF +   MKLP+ T + V +S
Sbjct: 316 SPVCNCIQGFNPRNIQQWDQRVWAGGCIRRTQLSCS-GDGFTRMKKMKLPETTMATVDRS 374

Query: 247 MNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDG---GQDLYIRMSA 303
           + +KEC+++C+ + +C A+ N+DIR GGSGC +W   L D+R++      GQDLY+R++A
Sbjct: 375 IGVKECKKRCISDCNCTAFANADIRNGGSGCVIWTERLEDIRNYATDAIDGQDLYVRLAA 434

Query: 304 SELGAKGEPTTKIVLIVISTAALLAVVI------------AAGYLIHKSRRNIVVNIARY 351
           +++  K   + KI+ + +  + LL +++            A+   I  ++RN  + +   
Sbjct: 435 ADIAKKRNASGKIISLTVGVSVLLLLIMFCLWKRKQKRAKASAISIANTQRNQNLPMNEM 494

Query: 352 FRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADE 411
              ++     E K E+    L+LPL E+ T+  AT+NFS   KLG+GGFG VYKG L D 
Sbjct: 495 VLSSKREFSGEYKFEE----LELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDG 550

Query: 412 QEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLD 471
           +EIAVKRLSK S QG  E  NE+ L ++LQH NLV++LGCCI G+EK+LIYE++ N SLD
Sbjct: 551 KEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLD 610

Query: 472 SFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS 531
           S++F + R   L+W++RF I  G ARGLLYLHQDSR RIIHRDLK SN+LLD++M PKIS
Sbjct: 611 SYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKIS 670

Query: 532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNR 591
           DFG+AR F  DETE NT +VVGTYGYM+PEYA  G FS KSDVFSFG+++LEIVSGKKNR
Sbjct: 671 DFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNR 730

Query: 592 GFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS-------FNLAEVIRCIHIGLLCVQ 644
           GFY+ D + +L+ + W  W EG   +++D    DS       F   EV++CI IGLLCVQ
Sbjct: 731 GFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQ 790

Query: 645 QYPEDRPCMPSVILMLGSEIV-LPQPKQPGYLADRKSTRLDSSLSMP----ESSSTNTIT 699
           +  E RP M SV+ M GSE   +PQPK PGY   R    LD S S      ES + N  T
Sbjct: 791 ELAEHRPAMSSVVWMFGSEATEIPQPKPPGYCVRRSPYELDPSSSWQCDENESWTVNQYT 850

Query: 700 ISELEGR 706
            S ++ R
Sbjct: 851 CSVIDAR 857

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization), probably acting in combination with S-locus-specific glycoproteins. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Brassica oleracea var. acephala (taxid: 3713)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3

 Score =  613 bits (1581), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 333/724 (45%), Positives = 475/724 (65%), Gaps = 38/724 (5%)

Query: 13  GNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNF 72
           GNLVL     G S    W+SF++P++TLLP MK G+  ++G++R +TSW+SP DP  GN 
Sbjct: 130 GNLVLLDPVTGKS---FWESFNHPTNTLLPFMKFGFTRQSGVDRIMTSWRSPGDPGSGNI 186

Query: 73  TWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNP-VFNFSFVSSEDELYYTFD 131
           T+ +ER+  P+++M+KG   ++R+G W G R+S      N  +FN SFV++ DE+  T+ 
Sbjct: 187 TYRIERRGFPQMMMYKGLTLWWRTGSWTGQRWSGVPEMTNKFIFNISFVNNPDEVSITYG 246

Query: 132 LIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGIC--IISD 189
           ++D +V +R+V+N+T  L QRF W    + W    + P D CD Y  CG  G C    ++
Sbjct: 247 VLDASVTTRMVLNETGTL-QRFRWNGRDKKWIGFWSAPEDKCDIYNHCGFNGYCDSTSTE 305

Query: 190 LPVCQCLKGFKPKS-RGYV--DWSQGCVRDKSLNYSR-EDGFIKFTAMKLPDATPSWVSK 245
              C CL G++PK+ R +   D S GC R K+ +    ++GF K   +K+P+ +   V  
Sbjct: 306 KFECSCLPGYEPKTPRDWFLRDASDGCTRIKADSICNGKEGFAKLKRVKIPNTSAVNVDM 365

Query: 246 SMNLKECREKCLENSSCMAYTNS--DIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSA 303
           ++ LKEC ++CL+N SC+AY ++  + + G  GC  W G ++D R +   GQD Y+R+  
Sbjct: 366 NITLKECEQRCLKNCSCVAYASAYHESQDGAKGCLTWHGNMLDTRTYLSSGQDFYLRVDK 425

Query: 304 SEL------GAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRR-----NIVVNIARYF 352
           SEL      GA G+   ++VLI+IS  A++ +++ + +   + RR     N +      F
Sbjct: 426 SELARWNGNGASGK--KRLVLILISLIAVVMLLLISFHCYLRKRRQRTQSNRLRKAPSSF 483

Query: 353 RENR---NNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLA 409
             +     +    ++ ED++   +LPLFEL+TIA AT+NF+   KLG GGFGPVYKG L 
Sbjct: 484 APSSFDLEDSFILEELEDKSRSRELPLFELSTIATATNNFAFQNKLGAGGFGPVYKGVLQ 543

Query: 410 DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKS 469
           +  EIAVKRLSK S QG++E KNE+ L SKLQHRNLV++LGCC+  EEK+L+YE++PNKS
Sbjct: 544 NGMEIAVKRLSKSSGQGMEEFKNEVKLISKLQHRNLVRILGCCVEFEEKMLVYEYLPNKS 603

Query: 470 LDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPK 529
           LD FIF +E+   LDW KR  II G  RG+LYLHQDSRLRIIHRDLKASNVLLD +M PK
Sbjct: 604 LDYFIFHEEQRAELDWPKRMGIIRGIGRGILYLHQDSRLRIIHRDLKASNVLLDNEMIPK 663

Query: 530 ISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKK 589
           I+DFGLAR FGG++ EG+TNRVVGTYGYM+PEYA DGQFS+KSDV+SFG+L+LEI++GK+
Sbjct: 664 IADFGLARIFGGNQIEGSTNRVVGTYGYMSPEYAMDGQFSIKSDVYSFGVLILEIITGKR 723

Query: 590 NRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF-KDSFNLAEVIRCIHIGLLCVQQYPE 648
           N  FY  +  LNL++H W  W  G   ++ID    +++++  EV++C+HIGLLCVQ+   
Sbjct: 724 NSAFY--EESLNLVKHIWDRWENGEAIEIIDKLMGEETYDEGEVMKCLHIGLLCVQENSS 781

Query: 649 DRPCMPSVILMLGSEIV-LPQPKQPGYLADRKST-----RLDSSLSMPESSSTNTITISE 702
           DRP M SV+ MLG   + LP PK P + A R+         D+  S   SS+ N +T+++
Sbjct: 782 DRPDMSSVVFMLGHNAIDLPSPKHPAFTAGRRRNTKTGGSSDNWPSGETSSTINDVTLTD 841

Query: 703 LEGR 706
           ++GR
Sbjct: 842 VQGR 845

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1

 Score =  613 bits (1580), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 348/721 (48%), Positives = 459/721 (63%), Gaps = 29/721 (4%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           +GN VLRG +   S+ +LWQSFD+P+DTLLP MKLG D K GL R +TSWKS  DPS G+
Sbjct: 136 NGNFVLRGSKINESDEFLWQSFDFPTDTLLPQMKLGRDHKRGLNRFVTSWKSSFDPSSGS 195

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAA-TLRQNPVFNFSFVSSEDELYYTF 130
           F + +E    PE   +    + YRSGPW+GLRFS    ++Q     ++F  + +E+ YTF
Sbjct: 196 FMFKLETLGLPEFFGFTSFLEVYRSGPWDGLRFSGILEMQQWDDIIYNFTENREEVAYTF 255

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
            + D   +SR+ +N    L + F W+   Q W +   +P+D CD Y +CG Y  C +S  
Sbjct: 256 RVTDHNSYSRLTINTVGRL-EGFMWEPTQQEWNMFWFMPKDTCDLYGICGPYAYCDMSTS 314

Query: 191 PVCQCLKGFKPKSRGYVDWSQGCV----RDKSLNYSREDGFIKFTAMKLPDATPSWVSKS 246
           P C C+KGF+P S    DW+ G V    R K+     ED F +   MK+P  T + V K 
Sbjct: 315 PTCNCIKGFQPLSPQ--DWASGDVTGRCRRKTQLTCGEDRFFRLMNMKIPATTAAIVDKR 372

Query: 247 MNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEL 306
           + LKEC EKC  + +C AY NSDIR GGSGC +W GE  D+R++   GQDL++R++A+E 
Sbjct: 373 IGLKECEEKCKTHCNCTAYANSDIRNGGSGCIIWIGEFRDIRNYAADGQDLFVRLAAAEF 432

Query: 307 GAKGEPTTKIVLIVISTAALLAV-VIAAGYLIHKSRRNIVVNIARYFRE--------NRN 357
           G +     KI+ ++I  + +L +  I   +   K +R         +R+        N  
Sbjct: 433 GERRTIRGKIIGLIIGISLMLVLSFIIYCFWKKKQKRARATAAPIGYRDRIQELIITNGV 492

Query: 358 NRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVK 417
              + ++   +  DL+LPL E  T+  AT+NFS +  LG GGFG VYKG L D QEIAVK
Sbjct: 493 VMSSGRRLLGEEEDLELPLTEFETVVMATENFSDSNILGRGGFGIVYKGRLLDGQEIAVK 552

Query: 418 RLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ 477
           RLS++S QG  E KNE+ L ++LQH NLV+LL CCI+ +EK+LIYE++ N SLDS +F+ 
Sbjct: 553 RLSEMSSQGTNEFKNEVRLIARLQHINLVRLLSCCIYADEKILIYEYLENGSLDSHLFET 612

Query: 478 -ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 536
            +    L+W  RF II G ARGLLYLHQDSR +IIHRDLKASNVLLD++M PKISDFG+A
Sbjct: 613 TQSSNKLNWQTRFSIINGIARGLLYLHQDSRFKIIHRDLKASNVLLDKNMTPKISDFGMA 672

Query: 537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS 596
           R F  DETE NT +VVGTYGYM+PEYA +G FSVKSDVFSFG+L+LEIVSGK+NRGF++S
Sbjct: 673 RIFERDETEANTRKVVGTYGYMSPEYAMEGIFSVKSDVFSFGVLVLEIVSGKRNRGFHNS 732

Query: 597 DNKLNLIRHAWKLWNEGMPSQLIDACFKDS------FNLAEVIRCIHIGLLCVQQYPEDR 650
               NL+ + W+ W EG   +++D+   DS      F   EV+RCI IGLLCVQ+  EDR
Sbjct: 733 GQDNNLLGYTWENWKEGKGLEIVDSIIVDSSSSMSLFQPHEVLRCIQIGLLCVQERAEDR 792

Query: 651 PCMPSVILMLGSEI-VLPQPKQPGYLADRKS-TRLDSSLSM---PESSSTNTITISELEG 705
           P M SV+LMLGSE   +PQPK+PGY   R S    DSS S     ES + N IT+S +  
Sbjct: 793 PKMSSVVLMLGSEKGEIPQPKRPGYCVGRSSLDTADSSSSTKRDSESLTVNQITVSVINA 852

Query: 706 R 706
           R
Sbjct: 853 R 853

Female specificity determinant of self-incompatibility.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score =  612 bits (1579), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 331/728 (45%), Positives = 461/728 (63%), Gaps = 55/728 (7%)

Query: 13  GNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNF 72
           GNLVL     G S    W+SFD+P+DT LP M+LG+  K GL+R +TSWKS  DP  G+ 
Sbjct: 127 GNLVLFDPVTGRS---FWESFDHPTDTFLPFMRLGFTRKDGLDRSLTSWKSHGDPGSGDL 183

Query: 73  TWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAA-TLRQNPVFNFSFVSSEDELYYTFD 131
              +ER+  P+LI++KG   ++R G W G R+S    +    +FN SFV++EDE+ +T+ 
Sbjct: 184 ILRMERRGFPQLILYKGVTPWWRMGSWTGHRWSGVPEMPIGYIFNNSFVNNEDEVSFTYG 243

Query: 132 LIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLP 191
           + D +V +R ++N+T  +  RFTW    + W    +VP++ CD YA CG  G C   D P
Sbjct: 244 VTDASVITRTMVNETGTM-HRFTWIARDKRWNDFWSVPKEQCDNYAHCGPNGYC---DSP 299

Query: 192 V-----CQCLKGFKPK-SRGYV--DWSQGCVRDKSLNY-SREDGFIKFTAMKLPDATPSW 242
                 C CL GF+PK  R +   D S GC + K  +  S +DGF+K   MK+PD + + 
Sbjct: 300 SSKTFECTCLPGFEPKFPRHWFLRDSSGGCTKKKRASICSEKDGFVKLKRMKIPDTSDAS 359

Query: 243 VSKSMNLKECREKCLENSSCMAYTNS--DIRGGGSGCAMWFGELIDMRDFPDGGQDLYIR 300
           V  ++ LKEC+++CL+N SC+AY ++  + + G  GC  W G ++D R + + GQD YIR
Sbjct: 360 VDMNITLKECKQRCLKNCSCVAYASAYHESKRGAIGCLKWHGGMLDARTYLNSGQDFYIR 419

Query: 301 MSASEL------GAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRE 354
           +   EL      G  G+    ++LI +  A +L  VI   + + + RR          + 
Sbjct: 420 VDKEELARWNRNGLSGKRRVLLILISLIAAVMLLTVIL--FCVVRERR----------KS 467

Query: 355 NRNNRGTE-------------QKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFG 401
           NR+   +              +  +D+  + +LPLF+L TI  AT+NFS   KLG GGFG
Sbjct: 468 NRHRSSSANFAPVPFDFDESFRFEQDKARNRELPLFDLNTIVAATNNFSSQNKLGAGGFG 527

Query: 402 PVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI 461
           PVYKG L +  EIAVKRLS+ S QG++E KNE+ L SKLQHRNLV++LGCC+  EEK+L+
Sbjct: 528 PVYKGVLQNRMEIAVKRLSRNSGQGMEEFKNEVKLISKLQHRNLVRILGCCVELEEKMLV 587

Query: 462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVL 521
           YE++PNKSLD FIF +E+   LDW KR  I+ G ARG+LYLHQDSRLRIIHRDLKASN+L
Sbjct: 588 YEYLPNKSLDYFIFHEEQRAELDWPKRMEIVRGIARGILYLHQDSRLRIIHRDLKASNIL 647

Query: 522 LDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
           LD +M PKISDFG+AR FGG++ EG T+RVVGT+GYMAPEYA +GQFS+KSDV+SFG+L+
Sbjct: 648 LDSEMIPKISDFGMARIFGGNQMEGCTSRVVGTFGYMAPEYAMEGQFSIKSDVYSFGVLM 707

Query: 582 LEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF-KDSFNLAEVIRCIHIGL 640
           LEI++GKKN  F+   +  NL+ H W LW  G  +++ID    +++++  EV++CI IGL
Sbjct: 708 LEIITGKKNSAFHEESS--NLVGHIWDLWENGEATEIIDNLMDQETYDEREVMKCIQIGL 765

Query: 641 LCVQQYPEDRPCMPSVILMLGSEIV-LPQPKQPGYL-ADRKSTRLDSSLSMPESSSTNTI 698
           LCVQ+   DR  M SV++MLG     LP PK P +  A R+     + L      S N +
Sbjct: 766 LCVQENASDRVDMSSVVIMLGHNATNLPNPKHPAFTSARRRGGENGACLKGQTGISVNDV 825

Query: 699 TISELEGR 706
           T S+++GR
Sbjct: 826 TFSDIQGR 833

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3

 Score =  578 bits (1490), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 311/715 (43%), Positives = 433/715 (60%), Gaps = 31/715 (4%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           SGNL+L+  R+ G    LW+SF +P D+ +P M LG D +TG   ++TSW S DDPS GN
Sbjct: 139 SGNLMLQDNRNNGE--ILWESFKHPYDSFMPRMTLGTDGRTGGNLKLTSWTSHDDPSTGN 196

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSF-VSSEDELYYTF 130
           +T  +     PEL++WK +   +RSGPWNG  F       + +F   F ++S+++   + 
Sbjct: 197 YTAGIAPFTFPELLIWKNNVPTWRSGPWNGQVFIGLPNMDSLLFLDGFNLNSDNQGTISM 256

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
              + +      ++    + Q+  W  + + W + +  P   CD Y  CG +G C   + 
Sbjct: 257 SYANDSFMYHFNLDPEGIIYQK-DWSTSMRTWRIGVKFPYTDCDAYGRCGRFGSCHAGEN 315

Query: 191 PVCQCLKGFKPKSRGYVD---WSQGCVRDKSLNYSRE------------DGFIKFTAMKL 235
           P C+C+KGF PK+    +   WS GC+R   L   R+            DGF+K   MK+
Sbjct: 316 PPCKCVKGFVPKNNTEWNGGNWSNGCMRKAPLQCERQRNVSNGGGGGKADGFLKLQKMKV 375

Query: 236 P-DATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGG 294
           P  A  S  S+ +    C + CL+N SC AY        G GC +W G+L+DM+ F   G
Sbjct: 376 PISAERSEASEQV----CPKVCLDNCSCTAYAYDR----GIGCMLWSGDLVDMQSFLGSG 427

Query: 295 QDLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRE 354
            DL+IR++ SEL         I   VI    + AV +      +K R     + +     
Sbjct: 428 IDLFIRVAHSELKTHSNLAVMIAAPVIGVMLIAAVCVLLACRKYKKRPAPAKDRSAELMF 487

Query: 355 NRNNRGTEQKNEDQN-IDL-DLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQ 412
            R    T       N I L +LPLFE   +A +TD+FS+  KLG+GGFGPVYKG L + Q
Sbjct: 488 KRMEALTSDNESASNQIKLKELPLFEFQVLATSTDSFSLRNKLGQGGFGPVYKGKLPEGQ 547

Query: 413 EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDS 472
           EIAVKRLS+ S QGL+EL NE+++ SKLQHRNLVKLLGCCI GEE++L+YE+MP KSLD+
Sbjct: 548 EIAVKRLSRKSGQGLEELMNEVVVISKLQHRNLVKLLGCCIEGEERMLVYEYMPKKSLDA 607

Query: 473 FIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD 532
           ++FD  + K+LDW  RF+I+ G  RGLLYLH+DSRL+IIHRDLKASN+LLD+++NPKISD
Sbjct: 608 YLFDPMKQKILDWKTRFNIMEGICRGLLYLHRDSRLKIIHRDLKASNILLDENLNPKISD 667

Query: 533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRG 592
           FGLAR F  +E E NT RVVGTYGYM+PEYA +G FS KSDVFS G++ LEI+SG++N  
Sbjct: 668 FGLARIFRANEDEANTRRVVGTYGYMSPEYAMEGFFSEKSDVFSLGVIFLEIISGRRNSS 727

Query: 593 FYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC 652
            +  +N LNL+ +AWKLWN+G  + L D    D     E+ +C+HIGLLCVQ+   DRP 
Sbjct: 728 SHKEENNLNLLAYAWKLWNDGEAASLADPAVFDKCFEKEIEKCVHIGLLCVQEVANDRPN 787

Query: 653 MPSVILMLGSE-IVLPQPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
           + +VI ML +E + L  PKQP ++  R ++  +SS    +  S N ++++ + GR
Sbjct: 788 VSNVIWMLTTENMSLADPKQPAFIVRRGASEAESSDQSSQKVSINDVSLTAVTGR 842

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	706
224124250	820	predicted protein [Populus trichocarpa]	0.961	0.828	0.627	0.0
224113157	786	predicted protein [Populus trichocarpa]	0.915	0.821	0.629	0.0
224113149	820	predicted protein [Populus trichocarpa]	0.927	0.798	0.633	0.0
224113153	785	predicted protein [Populus trichocarpa]	0.913	0.821	0.625	0.0
224126243	836	predicted protein [Populus trichocarpa]	0.974	0.822	0.606	0.0
449458261	814	PREDICTED: receptor-like serine/threonin	0.964	0.836	0.585	0.0
449476944	1267	PREDICTED: receptor-like serine/threonin	0.964	0.537	0.583	0.0
224115136	843	predicted protein [Populus trichocarpa]	0.977	0.818	0.581	0.0
356546914	788	PREDICTED: G-type lectin S-receptor-like	0.917	0.822	0.574	0.0
356545297	824	PREDICTED: G-type lectin S-receptor-like	0.971	0.832	0.579	0.0

>gi|224124250|ref|XP_002319283.1| predicted protein [Populus trichocarpa] gi|222857659|gb|EEE95206.1| predicted protein [Populus trichocarpa]

 Score =  897 bits (2318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/706 (62%), Positives = 531/706 (75%), Gaps = 27/706 (3%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           SGNLVLR E+D  S  YLWQSFDYPSDTLLPGMKLGWDL+ GL+RR+++WKSPDDPS G+
Sbjct: 131 SGNLVLRDEKDDNSGIYLWQSFDYPSDTLLPGMKLGWDLRIGLDRRLSAWKSPDDPSSGD 190

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAA-TLRQNPVFNFSFVSSEDELYYTF 130
           FTW  + Q NPEL+MWKGS+K+YRSGPWNG+ FS    LR NPVF F FV   +E+YYT+
Sbjct: 191 FTWGTQLQSNPELVMWKGSKKYYRSGPWNGIGFSGGLALRINPVFYFDFVDDGEEVYYTY 250

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
           +L +K++ +RIVMNQT Y RQR+TW +  Q W L   VPRD CDTY LCG YG CI+S  
Sbjct: 251 NLKNKSLITRIVMNQTTYFRQRYTWNEINQTWVLYATVPRDYCDTYNLCGAYGNCIMSQS 310

Query: 191 PVCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSM 247
           PVCQCL+ F P+S      +DWS+GCVR+K L+  + DGF+K+  +KLPDAT SWV+K+M
Sbjct: 311 PVCQCLEKFTPRSPESWNSMDWSKGCVRNKPLDCQKGDGFVKYVGLKLPDATNSWVNKTM 370

Query: 248 NLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELG 307
           NLKECR KCL+N SCMAYT ++I+   SGCA+WFG+LID+R F   GQ++YIR++ASE  
Sbjct: 371 NLKECRSKCLQNCSCMAYTATNIKER-SGCAVWFGDLIDIRQFSAAGQEIYIRLNASESR 429

Query: 308 AKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARY-FRENRNNRGTEQKNE 366
           AK     K+ +      + L++ +A G L+          +A Y F+    + G  ++  
Sbjct: 430 AKAASKIKMTV-----GSALSIFVACGILL----------VAYYIFKRKAKHIGGNREEN 474

Query: 367 DQ-----NIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK 421
           DQ       DL+LPLF+  TIA AT+ FS N KLGEGGFGPVYKGTL D QEIA K LS+
Sbjct: 475 DQIDSGPKEDLELPLFQFTTIAKATNGFSFNNKLGEGGFGPVYKGTLEDGQEIAAKTLSR 534

Query: 422 ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK 481
            S QGL E KNE+IL +KLQHRNLVKLLGCCI GEEK+L+YE+MPNKSLDSFIFDQ R K
Sbjct: 535 SSGQGLNEFKNEVILITKLQHRNLVKLLGCCIQGEEKILVYEYMPNKSLDSFIFDQTRGK 594

Query: 482 LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
           LLDWSKRF IICG ARGLLYLHQDSRLRI+HRDLKASNVLLD+DMNPKISDFGLAR FGG
Sbjct: 595 LLDWSKRFSIICGIARGLLYLHQDSRLRIVHRDLKASNVLLDKDMNPKISDFGLARMFGG 654

Query: 542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLN 601
           D+TEGNT RVVGTYGYMAPEYA+DG FSVKSDVFSFGIL+LEI+SGKK+RGF H D+ L+
Sbjct: 655 DQTEGNTTRVVGTYGYMAPEYATDGLFSVKSDVFSFGILMLEIISGKKSRGFCHPDHSLS 714

Query: 602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVI-RCIHIGLLCVQQYPEDRPCMPSVILML 660
           LI HAW+LW +G P  LI+A   +S NL+EVI RCI+I LLCVQQ+P+DRP M +V+ ML
Sbjct: 715 LIGHAWRLWKDGKPLGLIEAFPGESCNLSEVIMRCINISLLCVQQHPDDRPSMATVVWML 774

Query: 661 GSEIVLPQPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
           G E  LPQPK+PG+       R  SS    E  S N IT S L  R
Sbjct: 775 GGENTLPQPKEPGFFKGSGPFRPSSSSKNTELFSNNEITSSLLYPR 820

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113157|ref|XP_002332644.1| predicted protein [Populus trichocarpa] gi|222832839|gb|EEE71316.1| predicted protein [Populus trichocarpa]

 Score =  889 bits (2298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/699 (62%), Positives = 534/699 (76%), Gaps = 53/699 (7%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           SGNLVLR E+   S  YLWQSFD+PSDTL+PGMKLGWDL+TGLERR++SW+S DDPSPG+
Sbjct: 137 SGNLVLRDEK-SDSGRYLWQSFDHPSDTLIPGMKLGWDLRTGLERRLSSWRSSDDPSPGD 195

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAAT-LRQNPVFNFSFVSSEDELYYTF 130
            TW ++ Q+NPE I+W+GS++++RSGPW G+ F+ A  L QNPVF  +FVSSEDE+Y ++
Sbjct: 196 LTWGIKLQNNPETIIWRGSQQYFRSGPWTGIAFTGAPELVQNPVFKLNFVSSEDEVYLSY 255

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
           +L + + FSRIV+NQT   R+ +TW +ATQ W L  +VPRD CD YA CG  G CII+DL
Sbjct: 256 NLKNISAFSRIVVNQTTNYREAYTWNEATQTWVLYASVPRDSCDNYASCGANGNCIINDL 315

Query: 191 PVCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSM 247
           P+C+CLK FKPKS      +DWS GCVR+K LN  + DGF+K+  +K PDAT SW++KSM
Sbjct: 316 PICRCLKKFKPKSPEKWNLMDWSDGCVRNKPLNCQKGDGFVKYLGLKWPDATHSWLNKSM 375

Query: 248 NLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELG 307
           NL ECR KCL+N SCMAY+NSD+RGGGSGC +W+G+LID+R FP GGQ+LYIRM+ SE  
Sbjct: 376 NLNECRAKCLQNCSCMAYSNSDVRGGGSGCIIWYGDLIDIRQFPAGGQELYIRMNPSE-- 433

Query: 308 AKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNED 367
                          +A +                           + +N++ T+ +NED
Sbjct: 434 ---------------SAEM---------------------------DQQNDQITDGENED 451

Query: 368 QNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGL 427
               L+LP FE A I NAT+NFSI  KLG+GGFGPVYKGTL D QEIAVKRLS  S QG 
Sbjct: 452 ----LELPQFEFAKIVNATNNFSIKNKLGQGGFGPVYKGTLEDGQEIAVKRLSMSSRQGS 507

Query: 428 KELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSK 487
           KE KNE+IL +KLQHRNLVKLLGC I  EE+LL+YE+MPNKSLDSF+FDQ + KLLDWSK
Sbjct: 508 KEFKNEVILINKLQHRNLVKLLGCSIQREERLLVYEYMPNKSLDSFLFDQTKSKLLDWSK 567

Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 547
           RF+IICG ARGLLYLHQDSRLRIIHRDLK+SNVLLD+DMNPKISDFGLAR FGGD+TEGN
Sbjct: 568 RFNIICGIARGLLYLHQDSRLRIIHRDLKSSNVLLDKDMNPKISDFGLARTFGGDQTEGN 627

Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW 607
           T+RVVGTYGYMAPEYA+DG FSVKSDVFSFGI+LLEIV+GKK+RGFYH DN L+LI +AW
Sbjct: 628 TSRVVGTYGYMAPEYATDGLFSVKSDVFSFGIMLLEIVTGKKSRGFYHPDNSLSLIGYAW 687

Query: 608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLP 667
           +LW EG P +L+D   ++S+NL+EV++CIHI LLCVQQYPEDRP M SV+LMLG E  LP
Sbjct: 688 RLWKEGKPLELVDGLAEESWNLSEVMKCIHISLLCVQQYPEDRPSMASVVLMLGGERTLP 747

Query: 668 QPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
           +PK+PG+  DR      SS S  ESSSTN I+ S LE R
Sbjct: 748 KPKEPGFFKDRGPVEAYSSSSKVESSSTNEISTSVLEPR 786

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113149|ref|XP_002332642.1| predicted protein [Populus trichocarpa] gi|222832837|gb|EEE71314.1| predicted protein [Populus trichocarpa]

 Score =  887 bits (2291), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/674 (63%), Positives = 519/674 (77%), Gaps = 19/674 (2%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           SGNLVLR E+D  S  YLWQSFDYPSDTLLPGMKLGWDL+ GL+RR+++WKSPDDPS G+
Sbjct: 125 SGNLVLRDEKDANSGIYLWQSFDYPSDTLLPGMKLGWDLRIGLDRRLSAWKSPDDPSSGD 184

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAA-TLRQNPVFNFSFVSSEDELYYTF 130
           FTW  + Q NPEL+MWKGS+++YRSGPWNG+ FS    LR NPVF F FV   +E+YYT+
Sbjct: 185 FTWGTQLQSNPELVMWKGSKEYYRSGPWNGIGFSGGPELRINPVFYFDFVDDGEEVYYTY 244

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
           +L +K++ +RIVMNQ+ Y RQR+TW +  Q W L  NVPRD CDTY+LCG YG CIIS  
Sbjct: 245 NLKNKSLITRIVMNQSTYFRQRYTWNEINQTWVLYANVPRDYCDTYSLCGAYGNCIISQS 304

Query: 191 PVCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSM 247
           PVC+CL+ F PKS      +DWSQGCVR+K L+  + DGF+K+  +KLPDAT SWV+K+M
Sbjct: 305 PVCECLEKFTPKSPESWNSMDWSQGCVRNKPLDCQKGDGFVKYVGLKLPDATNSWVNKTM 364

Query: 248 NLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELG 307
           NLKECR  CLEN SCMAYT ++I+   SGCA+WFG+LID+   P  GQ++YIRM+ASE  
Sbjct: 365 NLKECRSICLENCSCMAYTATNIKER-SGCAIWFGDLIDITQLPAAGQEIYIRMNASE-- 421

Query: 308 AKGEPTTKIVLIVISTAALLAVVIAAG-----YLIHKSRRNIVVNIARYFRENRNNRGTE 362
                +  + L++++    L++ +A G     Y I K +  ++  +      NR     +
Sbjct: 422 ----SSECLSLVLMAVGIALSIFVACGILLVAYYIFKRKAKLIGKVTLTAFSNREE--ND 475

Query: 363 QKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI 422
           Q +     DL+LPLF+  TIA AT+ FS N KLGEGGFGPVYKGTL D QEIA K  S+ 
Sbjct: 476 QIDSGPKEDLELPLFQFTTIAKATNGFSFNNKLGEGGFGPVYKGTLEDGQEIAAKTHSRS 535

Query: 423 SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL 482
           S QG+ E KNE+IL +KLQHRNLVKLLGCCI GEEK+L+YE+MPNKSLDSFIFDQ R +L
Sbjct: 536 SGQGINEFKNEVILITKLQHRNLVKLLGCCIQGEEKILVYEYMPNKSLDSFIFDQTRGEL 595

Query: 483 LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 542
           LDWSKRF IICG ARGLLYLHQDSRLRI+HRDLKASNVLLD+DMNPKISDFGLAR FGGD
Sbjct: 596 LDWSKRFSIICGIARGLLYLHQDSRLRIVHRDLKASNVLLDKDMNPKISDFGLARMFGGD 655

Query: 543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL 602
           +TEGNT RVVGTYGYMAPEYA+DG FSVKSDVFSFGIL+LEI+SGKK+RGFYH D+ L+L
Sbjct: 656 QTEGNTTRVVGTYGYMAPEYATDGLFSVKSDVFSFGILMLEIISGKKSRGFYHPDHSLSL 715

Query: 603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVI-RCIHIGLLCVQQYPEDRPCMPSVILMLG 661
           I HAW+LW +G P  LI+A   +S NL+EVI RCI+I LLCVQQ+P+DRP M +V+ MLG
Sbjct: 716 IGHAWRLWKDGKPLDLIEAFPGESRNLSEVIMRCINISLLCVQQHPDDRPSMATVVWMLG 775

Query: 662 SEIVLPQPKQPGYL 675
            E  LPQP +PG+ 
Sbjct: 776 CENTLPQPNEPGFF 789

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113153|ref|XP_002332643.1| predicted protein [Populus trichocarpa] gi|222832838|gb|EEE71315.1| predicted protein [Populus trichocarpa]

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/699 (62%), Positives = 528/699 (75%), Gaps = 54/699 (7%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           SGNLVLR E+   S  YLWQSFD+PSDTL+PGMKLGWDL+TGLERR++SW+S DDPSPG+
Sbjct: 137 SGNLVLRDEKSD-SGRYLWQSFDHPSDTLIPGMKLGWDLRTGLERRLSSWRSSDDPSPGD 195

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAAT-LRQNPVFNFSFVSSEDELYYTF 130
            TW ++ Q+NPE I+W+GS++++RSGPW G+ F+ A  L QNPVF  +FVSSEDE+Y ++
Sbjct: 196 LTWGIKLQNNPETIIWRGSQQYFRSGPWTGIAFTGAPELVQNPVFKLNFVSSEDEVYLSY 255

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
           +L + + FSRIV+NQT   R+ +TW +ATQ W L  +VPRD CD YA CG  G CII+DL
Sbjct: 256 NLKNISAFSRIVVNQTTNYREAYTWNEATQTWVLYASVPRDSCDNYASCGANGNCIINDL 315

Query: 191 PVCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSM 247
           P+C+CLK FKPKS      +DWS GCVR+K LN  + DGF+K+  +K PDAT SW++KSM
Sbjct: 316 PICRCLKKFKPKSPEKWNLMDWSDGCVRNKPLNCQKGDGFVKYLGLKWPDATHSWLNKSM 375

Query: 248 NLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELG 307
           NL ECR KCL+N SCMAY+NSD+RGGGSGC +W+G LID+R FP GGQ+LYIRM+ S   
Sbjct: 376 NLNECRAKCLQNCSCMAYSNSDVRGGGSGCIIWYGGLIDIRQFPAGGQELYIRMNPS--- 432

Query: 308 AKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNED 367
                                                         E+  ++  +Q  + 
Sbjct: 433 ----------------------------------------------ESEMDQQNDQITDG 446

Query: 368 QNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGL 427
           +N DL+LP FE A I NAT+NFSI  KLG+GGFGPVYKGTL D QEIAVKRLS  S QG 
Sbjct: 447 ENEDLELPQFEFAKIVNATNNFSIENKLGQGGFGPVYKGTLEDGQEIAVKRLSMSSGQGS 506

Query: 428 KELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSK 487
           KE KNE+IL +KLQHRNLVKLLGC I  EE+LL+YE+MPNKSLDSF+FDQ + KLLDWSK
Sbjct: 507 KEFKNEVILINKLQHRNLVKLLGCSIQREERLLVYEYMPNKSLDSFLFDQTKSKLLDWSK 566

Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 547
           RF+IICG ARGLLYLHQDSRLRIIHRDLK+SNVLLD+DMNPKISDFGLAR FGGD+TEGN
Sbjct: 567 RFNIICGIARGLLYLHQDSRLRIIHRDLKSSNVLLDKDMNPKISDFGLARTFGGDQTEGN 626

Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW 607
           T+RVVGTYGYMAPEYA+DG FSVKSDVFSFGI+LLEIV+GKK+RGFYH DN L+LI +AW
Sbjct: 627 TSRVVGTYGYMAPEYATDGLFSVKSDVFSFGIMLLEIVTGKKSRGFYHPDNSLSLIGYAW 686

Query: 608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLP 667
           +LW EG P +L+D   ++S+NL+EV++CIHI LLCVQQYPEDRP M SV+LMLG E  LP
Sbjct: 687 RLWKEGKPLELVDGLAEESWNLSEVMKCIHISLLCVQQYPEDRPSMASVVLMLGGERTLP 746

Query: 668 QPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
           +PK+PG+  DR      SS S  ESSSTN I+ S LE R
Sbjct: 747 KPKEPGFFKDRGPVEAYSSSSKVESSSTNEISTSVLEPR 785

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126243|ref|XP_002319790.1| predicted protein [Populus trichocarpa] gi|222858166|gb|EEE95713.1| predicted protein [Populus trichocarpa]

 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/719 (60%), Positives = 532/719 (73%), Gaps = 31/719 (4%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           SGNLVLR E+D  S +YLWQSFDYPSDT+LPGMKLGWDL+ GL+RR+++WKSPDDPS G+
Sbjct: 125 SGNLVLRDEKDVNSGSYLWQSFDYPSDTMLPGMKLGWDLRIGLDRRLSAWKSPDDPSSGD 184

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSA-ATLRQNPVFNFSFVSSEDELYYTF 130
           FTW  + Q NPEL++WKGS K++RSGPWNG+ FS  A LR NPVF F FV + +E+YYT+
Sbjct: 185 FTWGTQLQSNPELVIWKGSEKYFRSGPWNGIGFSGEAALRINPVFYFDFVDNGEEVYYTY 244

Query: 131 DLIDKAVFSRIVMNQTL-YLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISD 189
           +L +K++ +R+VMNQT  +LRQR+TW + +Q WEL   VPRD CD Y LCG YG CIIS 
Sbjct: 245 NLKNKSLITRLVMNQTTGFLRQRYTWNEISQTWELYAYVPRDYCDNYNLCGAYGNCIISQ 304

Query: 190 LPVCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKS 246
            PVC+CL+ F PKS      ++WSQGCVR+K L+  + DGF+K+  +KLPDAT SWV+K+
Sbjct: 305 SPVCECLEKFTPKSPESWNSMNWSQGCVRNKPLDCQKGDGFVKYVGLKLPDATNSWVNKT 364

Query: 247 MNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEL 306
           MNLKECR KCL+N SCMAYT +DI+   SGCA+WFG+LID+R FPDGGQ++YIRM+ASE 
Sbjct: 365 MNLKECRSKCLQNCSCMAYTATDIKER-SGCAIWFGDLIDIRQFPDGGQEIYIRMNASE- 422

Query: 307 GAKGEPTTKIVLIVISTAALLAVVIAAG-----YLIHKSRRNIVVNIARYF--------- 352
                 +  + LI +     L++ +A G     Y I K    +  + +            
Sbjct: 423 -----SSECLSLIKMEMGIALSIFVACGMLLVAYYIFKRTEKLKAHYSFLLVYHVCDSHS 477

Query: 353 ----RENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTL 408
               +   N    +Q +     D++LPLF+  TIA AT+ FS+N K+GEGGFGPVYKGTL
Sbjct: 478 LLSEKTGGNREENDQIDSGPMEDMELPLFQFTTIAKATNGFSLNNKIGEGGFGPVYKGTL 537

Query: 409 ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK 468
            D QEIAVK LS+ S QGL E KNE+IL +KLQHRNLVKLLGCCI GEEK+L+YE+MPN+
Sbjct: 538 EDGQEIAVKTLSRSSGQGLNEFKNEVILITKLQHRNLVKLLGCCIQGEEKILVYEYMPNR 597

Query: 469 SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP 528
           SLDSFIFDQ R KLLDWSKRF IICG ARGLLYLHQDSRLRI+HRDLKASNVLLD+DMNP
Sbjct: 598 SLDSFIFDQTRGKLLDWSKRFSIICGIARGLLYLHQDSRLRIVHRDLKASNVLLDKDMNP 657

Query: 529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           KISDFGLAR  GGD+TEGNT RV+GTYGYMAPEYA+DG FSVKSDVFSFGIL+LEI+SGK
Sbjct: 658 KISDFGLARMVGGDQTEGNTTRVIGTYGYMAPEYATDGLFSVKSDVFSFGILMLEIISGK 717

Query: 589 KNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVI-RCIHIGLLCVQQYP 647
           K+RGFYH D  L+L  HAW+LW +G P  LI+A   +S NL+EVI RCI+I LLCVQ +P
Sbjct: 718 KSRGFYHPDRSLSLTAHAWRLWKDGKPLDLIEAFPGESRNLSEVIMRCINISLLCVQHHP 777

Query: 648 EDRPCMPSVILMLGSEIVLPQPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
           +DRP M +V+ MLG E  LPQP +PG+          SS S  E  S N  T S L  R
Sbjct: 778 DDRPSMATVVWMLGGENTLPQPNEPGFFKGSGPFGPSSSSSNIELYSNNEFTASLLYPR 836

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458261|ref|XP_004146866.1| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cucumis sativus]

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/698 (58%), Positives = 516/698 (73%), Gaps = 17/698 (2%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           +GNL+L+   D  SE   WQSFDYP+DTLLPGMKLGWD K G++RR+++WK+ DDPSPG+
Sbjct: 131 NGNLLLK---DAESEETSWQSFDYPTDTLLPGMKLGWDFKNGIQRRLSAWKTSDDPSPGS 187

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFD 131
            T  +     PE +MW GS ++ RSGPWNGL+FSA      P+  +S+V+++ EL Y+++
Sbjct: 188 LTMEMMNTSYPEPVMWNGSSEYMRSGPWNGLQFSAKPTSALPILVYSYVNNKSELSYSYE 247

Query: 132 LIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLP 191
           LI+ ++  R+V+NQT+  R+   W +  +NW+    +PRD CDTY++CG +G C I  +P
Sbjct: 248 LINSSLIGRMVLNQTILRREALLWSEPEKNWKPYAAMPRDYCDTYSVCGAFGSCDIEQVP 307

Query: 192 VCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMN 248
            CQCL GF P  +     +D+++GCVR+K LN S + GF K   +KLPD   SWV++SM+
Sbjct: 308 ACQCLFGFHPNVQEKWNLMDYTEGCVRNKPLNCSDKTGFAKLPGLKLPDTKQSWVNESMS 367

Query: 249 LKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELGA 308
           L ECREKCL N SC+A+ N+DIRG GSGCA+WFGEL+D++    GGQDLY+RM ASEL  
Sbjct: 368 LNECREKCLRNCSCVAFANTDIRGSGSGCAIWFGELVDIKVVRRGGQDLYVRMLASELET 427

Query: 309 KGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNEDQ 368
           K   +  + +IV + A L+  ++  G+ + +S+R  +              G  +  E Q
Sbjct: 428 KKTSSVAVGVIVGAAALLILGLLLIGFYVIRSKRRKL-----------EATGAGKDLEGQ 476

Query: 369 NIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLK 428
             DL+LPLF LATI+NATDNFS   KLGEGGFG V++G L D +EIAVKRLS  S QG  
Sbjct: 477 EDDLELPLFNLATISNATDNFSNFNKLGEGGFGAVFRGRLTDGKEIAVKRLSSYSRQGTD 536

Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
           E KNE+IL +KLQHRNLVKLLGCCI GEEK+LIYE+MPNKSLDSFIFD  R KLLDWSKR
Sbjct: 537 EFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDSFIFDSARKKLLDWSKR 596

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
           F+IICG ARG+LYLHQDSRLRIIHRDLKASNVLLD D+NPKISDFG+AR FGGD+TEGNT
Sbjct: 597 FNIICGVARGILYLHQDSRLRIIHRDLKASNVLLDIDLNPKISDFGMARTFGGDQTEGNT 656

Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK 608
            RVVGTYGYMAPEYA DGQFS+KSDVFSFGIL+LEI+SG+KNRGF+  ++ LNLI HAWK
Sbjct: 657 RRVVGTYGYMAPEYAIDGQFSIKSDVFSFGILMLEIISGEKNRGFFRPNHALNLIGHAWK 716

Query: 609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQ 668
           LWNEG P +LIDA   +S+ L+EV+RCIH+ LLC+QQ PEDRP M +V+LML SE  L Q
Sbjct: 717 LWNEGKPLELIDASIGESYALSEVLRCIHVSLLCLQQLPEDRPTMSNVVLMLSSEGSLAQ 776

Query: 669 PKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
           PKQPG+  +R S  + S     ESS TN +TI+ LE R
Sbjct: 777 PKQPGFYMERDSLEVFSVSGKNESSITNELTITLLEAR 814

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449476944|ref|XP_004154883.1| PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Cucumis sativus]

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/698 (58%), Positives = 517/698 (74%), Gaps = 17/698 (2%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           +GNL+L+   D  SE   WQSFDYP+DTLLPGMKLGWD K G++RR+++WK+ DDPSPG+
Sbjct: 131 NGNLLLK---DAESEETSWQSFDYPTDTLLPGMKLGWDFKNGIQRRLSAWKTSDDPSPGS 187

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFD 131
            T  +     PE +MW GS ++ RSGPWNGL++SA      P+  +S+V+++ EL Y+++
Sbjct: 188 LTMEMMNTSYPEPVMWNGSSEYMRSGPWNGLQYSAKPTSALPILVYSYVNNKSELSYSYE 247

Query: 132 LIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLP 191
           LI+ ++  R+V+NQT+  R+   W +  +NW+    +PRD CDTY++CG +G C I  +P
Sbjct: 248 LINSSLIGRMVLNQTILRREALLWSEPEKNWKPYAAMPRDYCDTYSVCGAFGSCDIEQVP 307

Query: 192 VCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMN 248
            CQCL GF P  +     +D+++GCVR+K LN S + GF K   +KLPD   SWV++SM+
Sbjct: 308 ACQCLFGFHPNVQEKWNLMDYTEGCVRNKPLNCSDKTGFAKLPGLKLPDTKQSWVNESMS 367

Query: 249 LKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELGA 308
           L ECREKCL N SC+A+ N+DIRG GSGCA+WFGEL+D++    GGQDLY+RM ASEL  
Sbjct: 368 LNECREKCLRNCSCVAFANTDIRGSGSGCAIWFGELVDIKVVRRGGQDLYVRMLASELET 427

Query: 309 KGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNEDQ 368
           K   +  + +IV + A L+  ++  G+ + +S+R  +              G  +  E Q
Sbjct: 428 KKTSSVAVGVIVGAAALLILGLLLIGFYVIRSKRRKL-----------EATGAGKDLEGQ 476

Query: 369 NIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLK 428
             DL+LPLF LATI+NATDNFS   KLGEGGFG V++G L D +EIAVKRLS  S QG  
Sbjct: 477 EDDLELPLFNLATISNATDNFSNFNKLGEGGFGAVFRGRLTDGKEIAVKRLSSYSRQGTD 536

Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
           E KNE+IL +KLQHRNLVKLLGCCI GEEK+LIYE+MPNKSLDSFIFD  R KLLDWSKR
Sbjct: 537 EFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDSFIFDSARKKLLDWSKR 596

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
           F+IICG ARG+LYLHQDSRLRIIHRDLKASNVLLD D+NPKISDFG+AR FGGD+TEGNT
Sbjct: 597 FNIICGVARGILYLHQDSRLRIIHRDLKASNVLLDIDLNPKISDFGMARTFGGDQTEGNT 656

Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK 608
            RVVGTYGYMAPEYA DGQFS+KSDVFSFGIL+LEI+SG+KNRGF+  ++ LNLI HAWK
Sbjct: 657 RRVVGTYGYMAPEYAIDGQFSIKSDVFSFGILMLEIISGEKNRGFFRPNHALNLIGHAWK 716

Query: 609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQ 668
           LWNEG P +LIDA   +S+ L+EV+RCIH+ LLC+QQ PEDRP M +V+LML SE  L Q
Sbjct: 717 LWNEGKPLELIDASIGESYALSEVLRCIHVSLLCLQQLPEDRPTMSNVVLMLSSEGSLAQ 776

Query: 669 PKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
           PKQPG+  +R S  + S     ESS+TN +TI+ LE +
Sbjct: 777 PKQPGFYMERDSLEVFSVSGKNESSTTNELTITLLEAK 814

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115136|ref|XP_002316951.1| predicted protein [Populus trichocarpa] gi|222860016|gb|EEE97563.1| predicted protein [Populus trichocarpa]

 Score =  834 bits (2155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/722 (58%), Positives = 517/722 (71%), Gaps = 32/722 (4%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           SGNLVLR + DG S   LWQSFDYP DT+LPGMK+GWDL+ G + R++SWKS DDPSPG+
Sbjct: 127 SGNLVLRDKNDGRS-GLLWQSFDYPCDTMLPGMKIGWDLRAGFDWRLSSWKSSDDPSPGD 185

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAAT-LRQNPVFNFSFVSSEDELYYTF 130
           FT  +ER+ NPE++ WKGS+K YRSGPWNG+ FS +T ++ NPVF F+FVS+  E+YY F
Sbjct: 186 FTMGIERESNPEVVAWKGSKKHYRSGPWNGVGFSGSTEVKPNPVFYFTFVSNNIEVYYIF 245

Query: 131 DL-IDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISD 189
           +L  +  V +R+V+N T   RQ +TW + TQ W LQ++VPRD CD Y LCG    CI + 
Sbjct: 246 NLKSESTVITRLVLNHTTSDRQCYTWNEETQTWVLQVSVPRDHCDNYGLCGANANCIFNA 305

Query: 190 LPVCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKS 246
           +PVCQCL+ FKPKS      +DWSQGCVR+K L+  + DGFIKF  +KLPDAT SWV+K 
Sbjct: 306 IPVCQCLEKFKPKSPEEWNKMDWSQGCVRNKELDCQKGDGFIKFDGLKLPDATHSWVNKD 365

Query: 247 MNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEL 306
           MNLKEC+ KCL N SCMAY+N DIRGGGSGCA WFG+L+D+R  P GGQ+LYIRM ASE+
Sbjct: 366 MNLKECKAKCLGNCSCMAYSNLDIRGGGSGCANWFGDLMDIRLVPGGGQELYIRMHASEI 425

Query: 307 GAK-GEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKN 365
           G +  +   KI  I  +   L+   +   Y + K +     N +       N+   +  N
Sbjct: 426 GDREAKANMKIAAIATAVVGLILGTLTISYHVSKEKAKSAENTSS--ERTENDWKNDTNN 483

Query: 366 EDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQ 425
             Q  D++LPLF  + IA+AT+NFS+N KLGEGGFGPVY+G L D  EIAVKRLS+ S Q
Sbjct: 484 GGQKEDMELPLFAFSAIADATNNFSVNNKLGEGGFGPVYRGKLEDGLEIAVKRLSRCSGQ 543

Query: 426 GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDW 485
           G  E KNE+IL +KLQHRNLVKLLGCC   EEK+LIYE+MPN+SLD FIFD+ + +LLDW
Sbjct: 544 GFSEFKNEVILINKLQHRNLVKLLGCCSQREEKMLIYEYMPNRSLDFFIFDETKGRLLDW 603

Query: 486 SKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE 545
           S+RF+II G ARGLLYLHQDSRLRIIHRDLKASNVLLD  MNPKISDFGLAR F  D+TE
Sbjct: 604 SRRFNIISGIARGLLYLHQDSRLRIIHRDLKASNVLLDDHMNPKISDFGLARMFVADQTE 663

Query: 546 GNTNRVV---------------------GTYGYMAPEYASDGQFSVKSDVFSFGILLLEI 584
           G+T+RV                         GYMAPEYA+DG FSVKSDVFSFG+LLLEI
Sbjct: 664 GDTSRVTSDSLASSNIPILPLCILTLNASCSGYMAPEYATDGLFSVKSDVFSFGVLLLEI 723

Query: 585 VSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQ 644
           +SGKK++GFYH D+  +LI H W+LWNEG  S+LIDA   +S N +EV+RC+HI LLCVQ
Sbjct: 724 ISGKKSKGFYHPDH--SLIGHTWRLWNEGKASELIDALGDESCNPSEVLRCVHISLLCVQ 781

Query: 645 QYPEDRPCMPSVILMLGSEIVLPQPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELE 704
            +P+DRP M SV+ MLG +  LP+PK+P +L  R      SS S   SSSTN IT+S  E
Sbjct: 782 HHPDDRPSMASVVWMLGGDSALPKPKEPAFLNYRAPGESSSSSSKVGSSSTNEITVSVFE 841

Query: 705 GR 706
            R
Sbjct: 842 PR 843

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546914|ref|XP_003541865.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max]

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/701 (57%), Positives = 513/701 (73%), Gaps = 53/701 (7%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           SGNLV+R E+D  SE YLW+SF+YP+DT LP MK GWDL+TGL R++ +WKSPDDPSP +
Sbjct: 135 SGNLVIRDEKDANSEDYLWESFNYPTDTFLPEMKFGWDLRTGLNRKLIAWKSPDDPSPSD 194

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAA-TLRQNPVFNFSFVSSEDELYYTF 130
           F++ +   + PE  M KG +KFYRSGPWNGL  S +  ++ NP+++F FVS++DELYYT+
Sbjct: 195 FSFGMVLNNYPEAYMMKGDQKFYRSGPWNGLHSSGSPQVKANPIYDFKFVSNKDELYYTY 254

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
            L + ++ SR+V+N T Y+R+R+ W ++ Q WE+  +VP DLCD+Y+LCG    C+ISD 
Sbjct: 255 SLKNSSMISRLVLNATSYVRKRYVWIESKQRWEVYTSVPLDLCDSYSLCGANANCVISDS 314

Query: 191 PVCQCLKGFKPK---SRGYVDWSQGCVRDKSLN--YSREDGFIKFTAMKLPDATPSWVSK 245
           PVCQCL+GFKPK   +   +DWS GC+R+K L+     +DGF K T +K PD T SW+ +
Sbjct: 315 PVCQCLQGFKPKLPEAWSSMDWSHGCIRNKELSCENKNKDGFNKLTLLKTPDTTHSWLDQ 374

Query: 246 SMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASE 305
           ++ L+EC+ KCL+N SCMAY NSDI G GSGCAMWFG+LID+R F  GGQD+Y+R+ ASE
Sbjct: 375 TIGLEECKAKCLDNCSCMAYANSDISGQGSGCAMWFGDLIDIRQFAAGGQDVYVRIDASE 434

Query: 306 LGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKN 365
           L                                +S  +I  N               Q +
Sbjct: 435 L-------------------------------ERSDFSIKSN---------------QNS 448

Query: 366 EDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQ 425
             Q  D+DLP+F+L+TIA AT NF++  K+GEGGFGPVY+G+L D QEIAVKRLS  S Q
Sbjct: 449 GMQVDDMDLPVFDLSTIAKATSNFTVKNKIGEGGFGPVYRGSLTDGQEIAVKRLSASSGQ 508

Query: 426 GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDW 485
           GL E KNE+ L +KLQHRNLVKLLGCC+ GEEK+L+YE+M N SLDSFIFD++R   LDW
Sbjct: 509 GLTEFKNEVKLIAKLQHRNLVKLLGCCLEGEEKMLVYEYMLNGSLDSFIFDEQRSGSLDW 568

Query: 486 SKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE 545
           SKRF+IICG A+GLLYLHQDSRLRIIHRDLKASNVLLD ++NPKISDFG+AR FG D+ E
Sbjct: 569 SKRFNIICGIAKGLLYLHQDSRLRIIHRDLKASNVLLDSELNPKISDFGMARIFGVDQQE 628

Query: 546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH 605
           GNT R+VGTYGYMAPEYA+DG FSVKSDVFSFG+LLLEI+SGK++RG+Y+ ++  NLI H
Sbjct: 629 GNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLLEIISGKRSRGYYNQNHSQNLIGH 688

Query: 606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV 665
           AWKLW EG P +LID   +DS +L++++ CIH+ LLCVQQ PEDRP M SV+LML SE+ 
Sbjct: 689 AWKLWKEGRPLELIDKSIEDSSSLSQMLHCIHVSLLCVQQNPEDRPGMSSVLLMLVSELE 748

Query: 666 LPQPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
           LP+PKQPG+   + S   DSS S  + SSTN ITI+ LE R
Sbjct: 749 LPEPKQPGFFG-KYSGEADSSTSKQQLSSTNEITITLLEAR 788

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545297|ref|XP_003541080.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max]

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/706 (57%), Positives = 505/706 (71%), Gaps = 20/706 (2%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
           SGNLVLR E+D   E YLWQSFD P+DT LPGMKLGWDLK GL   +T+WK+ DDPSPG+
Sbjct: 128 SGNLVLRDEKDTNPENYLWQSFDNPTDTFLPGMKLGWDLKKGLNTVLTAWKNWDDPSPGD 187

Query: 72  FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSA-ATLRQNPVFNFSFVSSEDELYYTF 130
           FT    R + PE +MWKG+ K++RSGPW+G +FS   ++  N + N++ VS++DE Y T+
Sbjct: 188 FTDITLRTNYPEEVMWKGTTKYWRSGPWDGTKFSGNPSVPSNAIVNYTIVSNKDEFYATY 247

Query: 131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
            + DK++ SRIVMNQ+LY+RQR TW   +Q W +   +P DLCD Y  CG +GIC+    
Sbjct: 248 SMTDKSIISRIVMNQSLYVRQRLTWNTDSQTWRVSSELPGDLCDHYNTCGAFGICVAGQA 307

Query: 191 PVCQCLKGFKPKS-RGY--VDWSQGCVRDK--SLNYSREDGFIKFTAMKLPDATPSWVSK 245
           PVC+CL GFKPKS R +  ++W+QGCV ++  S     +DGF KF+ +K PD   SWV+ 
Sbjct: 308 PVCKCLDGFKPKSPRNWNQMNWNQGCVHNQTWSCREKNKDGFTKFSNVKAPDTERSWVNA 367

Query: 246 SMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASE 305
           SM L ECR KC EN SCMAY NS+IRG GSGCA+W G+L+D+R  P+ GQDLYIR++ SE
Sbjct: 368 SMTLGECRVKCWENCSCMAYANSNIRGEGSGCAIWIGDLLDIRLMPNAGQDLYIRLAVSE 427

Query: 306 LGAKG----EPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGT 361
              +     + + K V+++ ST + +  +I     I+ S RN    I           G 
Sbjct: 428 TAQQSHDQKDNSNKKVVVIASTISSVIAMILIFIFIYWSYRNKNKEIIT---------GI 478

Query: 362 EQK-NEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLS 420
           E K NE Q  D +LPLF+L  IA ATD+FS +KKLGEGGFGPVYKGTL D QE+AVKRLS
Sbjct: 479 EGKSNESQQEDFELPLFDLVLIAQATDHFSDHKKLGEGGFGPVYKGTLPDGQEVAVKRLS 538

Query: 421 KISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERC 480
           + S QGLKE KNE++L ++LQHRNLVK+LGCC   +EKLLIYE+M NKSLD F+FD  R 
Sbjct: 539 QTSRQGLKEFKNEVMLCAELQHRNLVKVLGCCFQDDEKLLIYEYMSNKSLDVFLFDSSRS 598

Query: 481 KLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG 540
           KLLDW KRF II G ARGLLYLHQDSRLRIIHRDLKASNVLLD +MNPKISDFGLAR  G
Sbjct: 599 KLLDWPKRFCIINGIARGLLYLHQDSRLRIIHRDLKASNVLLDNEMNPKISDFGLARMCG 658

Query: 541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
           GD+ EG T+R+VGTYGYMAPEYA DG FS+KSDVFSFG+LLLEIVSGKKN   ++ ++  
Sbjct: 659 GDQIEGETSRIVGTYGYMAPEYAFDGLFSIKSDVFSFGVLLLEIVSGKKNSRLFYPNDYN 718

Query: 601 NLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
           NLI HAW+LW EG P Q ID+  +DS  L E +RCIHIGLLCVQ +P DRP M SV+++L
Sbjct: 719 NLIGHAWRLWKEGNPMQFIDSSLEDSCILYEALRCIHIGLLCVQHHPNDRPNMASVVVLL 778

Query: 661 GSEIVLPQPKQPGYLADRKSTRLDSSLSMPESSSTNTITISELEGR 706
            +E  LP PK P YL+   ST  +SS     S S N +TIS L  R
Sbjct: 779 SNENALPLPKDPSYLSKDISTERESSSENFTSVSINDVTISMLSDR 824

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	706
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.457	0.412	0.631	6.5e-188
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.943	0.783	0.516	6.6e-184
TAIR|locus:2131694	815	AT4G27300 [Arabidopsis thalian	0.920	0.797	0.523	7.8e-181
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.941	0.788	0.503	4e-177
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.947	0.789	0.493	1.6e-173
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.967	0.822	0.439	1.3e-148
UNIPROTKB|O49974	848	KIK1 "Serine/threonine-protein	0.856	0.713	0.451	4.6e-137
TAIR|locus:2197709	809	AT1G61480 [Arabidopsis thalian	0.906	0.791	0.431	1.4e-135
TAIR|locus:2200923	802	AT1G61550 [Arabidopsis thalian	0.907	0.799	0.439	7.7e-135
TAIR|locus:2200888	804	AT1G61500 [Arabidopsis thalian	0.903	0.793	0.445	9.8e-135

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 1072 (382.4 bits), Expect = 6.5e-188, Sum P(2) = 6.5e-188
 Identities = 206/326 (63%), Positives = 258/326 (79%)

Query:   354 ENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQE 413
             +  ++R + +K E++  DL+LP  +L T++ AT  FS   KLG+GGFGPVYKGTLA  QE
Sbjct:   432 QRESSRVSSRKQEEE--DLELPFLDLDTVSEATSGFSAGNKLGQGGFGPVYKGTLACGQE 489

Query:   414 IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF 473
             +AVKRLS+ S QG++E KNEI L +KLQHRNLVK+LG C+  EE++LIYE+ PNKSLDSF
Sbjct:   490 VAVKRLSRTSRQGVEEFKNEIKLIAKLQHRNLVKILGYCVDEEERMLIYEYQPNKSLDSF 549

Query:   474 IFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDF 533
             IFD+ER + LDW KR  II G ARG+LYLH+DSRLRIIHRDLKASNVLLD DMN KISDF
Sbjct:   550 IFDKERRRELDWPKRVEIIKGIARGMLYLHEDSRLRIIHRDLKASNVLLDSDMNAKISDF 609

Query:   534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGF 593
             GLAR  GGDETE NT RVVGTYGYM+PEY  DG FS+KSDVFSFG+L+LEIVSG++NRGF
Sbjct:   610 GLARTLGGDETEANTTRVVGTYGYMSPEYQIDGYFSLKSDVFSFGVLVLEIVSGRRNRGF 669

Query:   594 YHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF-NLAEVIRCIHIGLLCVQQYPEDRPC 652
              + ++KLNL+ HAW+ + E    ++ID    +S  +++EV+R IHIGLLCVQQ P+DRP 
Sbjct:   670 RNEEHKLNLLGHAWRQFLEDKAYEIIDEAVNESCTDISEVLRVIHIGLLCVQQDPKDRPN 729

Query:   653 MPSVILMLGSEIVLPQPKQPGYLADR 678
             M  V+LML SE++L  P+QPG+  +R
Sbjct:   730 MSVVVLMLSSEMLLLDPRQPGFFNER 755

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1784 (633.1 bits), Expect = 6.6e-184, P = 6.6e-184
 Identities = 354/686 (51%), Positives = 457/686 (66%)

Query:    12 SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
             +GN VLR  ++   +  LWQSFD+P+DTLLP MKLGWD KTG  R I SWKSPDDPS G+
Sbjct:   135 NGNFVLRDSKNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSSGD 194

Query:    72 FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFN-FSFVSSEDELYYTF 130
             F++ +E +  PE+ +W    + YRSGPWNG+RFS     Q   +  F+F +S++E+ Y+F
Sbjct:   195 FSFKLETEGFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMVFNFTTSKEEVTYSF 254

Query:   131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
              +    V+SR+ ++ +  L QRFTW +  QNW      P+D CD Y  CG YG C  +  
Sbjct:   255 RITKSDVYSRLSISSSGLL-QRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSNTS 313

Query:   191 PVCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSM 247
             PVC C+KGFKP++    G  D S GCVR   L+    DGF++   MKLPD T + V + +
Sbjct:   314 PVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTTASVDRGI 373

Query:   248 NLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELG 307
              +KEC +KCL + +C A+ N+DIRG GSGC  W GEL D+R++  GGQDLY+R++A++L 
Sbjct:   374 GVKECEQKCLRDCNCTAFANTDIRGSGSGCVTWTGELFDIRNYAKGGQDLYVRLAATDLE 433

Query:   308 AKGEPTTKIVLIVISTAALLAVVIAAGYLI-HKSRRNIVVN--IARYFRENRNNRGTEQ- 363
              K   + KI+   I  + LL +     +L   K +R+I++   I  +   +R+    E  
Sbjct:   434 DKRNRSAKIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILIETPIVDHQLRSRDLLMNEVV 493

Query:   364 -------KNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAV 416
                      E+   DL+LPL E   +A AT+NFS   KLG+GGFG VYKG L D QE+AV
Sbjct:   494 ISSRRHISRENNTDDLELPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQEMAV 553

Query:   417 KRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD 476
             KRLSK S QG  E KNE+ L ++LQH NLV+LL CC+   EK+LIYE++ N SLDS +FD
Sbjct:   554 KRLSKTSVQGTDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFD 613

Query:   477 QERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 536
             + R   L+W  RF II G ARGLLYLHQDSR RIIHRDLKASN+LLD+ M PKISDFG+A
Sbjct:   614 KSRNSKLNWQMRFDIINGIARGLLYLHQDSRFRIIHRDLKASNILLDKYMTPKISDFGMA 673

Query:   537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS 596
             R FG DETE NT +VVGTYGYM+PEYA DG FS+KSDVFSFG+LLLEI+S K+N+GFY+S
Sbjct:   674 RIFGRDETEANTRKVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISSKRNKGFYNS 733

Query:   597 DNKLNLIRHAWKLWNEGMPSQLIDACFKDS---FNLAEVIRCIHIGLLCVQQYPEDRPCM 653
             D  LNL+   W+ W EG   ++ID    DS   F   E++RCI IGLLCVQ+  EDRP M
Sbjct:   734 DRDLNLLGCVWRNWKEGKGLEIIDPIITDSSSTFRQHEILRCIQIGLLCVQERAEDRPTM 793

Query:   654 PSVILMLGSE-IVLPQPKQPGYLADR 678
               VILMLGSE   +PQPK PGY  +R
Sbjct:   794 SLVILMLGSESTTIPQPKAPGYCLER 819

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]

 Score = 1755 (622.8 bits), Expect = 7.8e-181, P = 7.8e-181
 Identities = 358/684 (52%), Positives = 466/684 (68%)

Query:     7 LFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDD 66
             L +  SGNL+       G E  LWQSFDYP +T+L GMKLG + KT +E  ++SWK+  D
Sbjct:   129 LKISCSGNLI----SSDGEEAVLWQSFDYPMNTILAGMKLGKNFKTQMEWSLSSWKTLKD 184

Query:    67 PSPGNFTWAVERQDNPELIMWK-GSRKF-YRSGPWNGLRFSAATL--RQNPVFNFSFVSS 122
             PSPG+FT +++ +  P+LI+ K G   + YR G WNGL F+ A    R+N +F++ F SS
Sbjct:   185 PSPGDFTLSLDTRGLPQLILRKNGDSSYSYRLGSWNGLSFTGAPAMGRENSLFDYKFTSS 244

Query:   123 EDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDY 182
               E+ Y++    + V SR+V+N T  L  RF   K  Q W L    P D CD Y++CG Y
Sbjct:   245 AQEVNYSWTPRHRIV-SRLVLNNTGKLH-RFIQSKQNQ-WILANTAPEDECDYYSICGAY 301

Query:   183 GICIIS--DLPVCQCLKGFKPKSRGYVDWSQG---CVRDKSLNYSREDGFIKFTAMKLPD 237
              +C I+  + P C CL+GFKPKS    + S+G   CV +   N  ++D F+KF  +KLPD
Sbjct:   302 AVCGINSKNTPSCSCLQGFKPKSGRKWNISRGAYGCVHEIPTNCEKKDAFVKFPGLKLPD 361

Query:   238 ATPSW--VSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQ 295
              + SW      M L++C+ KC  N SC AY N+DIR GG GC +WFG+L+DMR++   GQ
Sbjct:   362 TSWSWYDAKNEMTLEDCKIKCSSNCSCTAYANTDIREGGKGCLLWFGDLVDMREYSSFGQ 421

Query:   296 DLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFREN 355
             D+YIRM  +++  KG    ++V +V+ +   +AVV+   +     R+ I+    RY  EN
Sbjct:   422 DVYIRMGFAKIEFKGR---EVVGMVVGSVVAIAVVLVVVFACF--RKKIM---KRYRGEN 473

Query:   356 RNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIA 415
                +G E++      DLDLP+F+  TI+ ATD+FS    LG GGFGPVYKG L D QEIA
Sbjct:   474 FR-KGIEEE------DLDLPIFDRKTISIATDDFSYVNFLGRGGFGPVYKGKLEDGQEIA 526

Query:   416 VKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF 475
             VKRLS  S QG++E KNE+ L +KLQHRNLV+LLGCCI GEE +LIYE+MPNKSLD FIF
Sbjct:   527 VKRLSANSGQGVEEFKNEVKLIAKLQHRNLVRLLGCCIQGEECMLIYEYMPNKSLDFFIF 586

Query:   476 DQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL 535
             D+ R   LDW KR +II G ARG+LYLHQDSRLRIIHRDLKA NVLLD DMNPKISDFGL
Sbjct:   587 DERRSTELDWKKRMNIINGVARGILYLHQDSRLRIIHRDLKAGNVLLDNDMNPKISDFGL 646

Query:   536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYH 595
             A++FGGD++E +TNRVVGTYGYM PEYA DG FSVKSDVFSFG+L+LEI++GK NRGF H
Sbjct:   647 AKSFGGDQSESSTNRVVGTYGYMPPEYAIDGHFSVKSDVFSFGVLVLEIITGKTNRGFRH 706

Query:   596 SDNKLNLIRHAWKLWNEGMPSQLIDA-CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMP 654
             +D+ LNL+ H WK+W E    ++ +    +++  + EV+RCIH+ LLCVQQ PEDRP M 
Sbjct:   707 ADHDLNLLGHVWKMWVEDREIEVPEEEWLEETSVIPEVLRCIHVALLCVQQKPEDRPTMA 766

Query:   655 SVILMLGSEIVLPQPKQPGYLADR 678
             SV+LM GS+  LP P QPG+  +R
Sbjct:   767 SVVLMFGSDSSLPHPTQPGFFTNR 790

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1720 (610.5 bits), Expect = 4.0e-177, P = 4.0e-177
 Identities = 350/695 (50%), Positives = 466/695 (67%)

Query:    12 SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
             +GN +LR   D  +   LWQSFD+P+DTLL  MKLGWD KTG  R + SWK+ DDPS G 
Sbjct:   133 NGNFLLR---DSNNRL-LWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGE 188

Query:    72 FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAA--TLRQNPVFNFSFVSSEDELYYT 129
             F+  +E  + PE  +       YRSGPWNG+RFS+   T++ + +  ++F +S++E+ Y+
Sbjct:   189 FSTKLETSEFPEFYICSKESILYRSGPWNGMRFSSVPGTIQVDYMV-YNFTASKEEVTYS 247

Query:   130 FDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISD 189
             + +    ++SR+ +N    L QR TW + TQ+W+     P+DLCD Y +CG++G C  + 
Sbjct:   248 YRINKTNLYSRLYLNSAGLL-QRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCDSNS 306

Query:   190 LPVCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKS 246
             LP C C+KGFKP +       D S GC+R   L+    DGF +   MKLPD T + V + 
Sbjct:   307 LPNCYCIKGFKPVNEQAWDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTATIVDRE 366

Query:   247 MNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASEL 306
             + LK C+E+CLE+ +C A+ N+DIR GGSGC +W  E++DMR++  GGQDLY+R++A+EL
Sbjct:   367 IGLKVCKERCLEDCNCTAFANADIRNGGSGCVIWTREILDMRNYAKGGQDLYVRLAAAEL 426

Query:   307 GAKGEPTTKIV--LIVISTAALLAVVIAAGYLIHKSRRNIVV---NIARYFRENR----- 356
               K     KI+   I +S   LL+ VI   +   K +R+I +   N+ +   ++      
Sbjct:   427 EDKRIKNEKIIGSSIGVSILLLLSFVIFH-FWKRKQKRSITIQTPNVDQVRSQDSLINDV 485

Query:   357 --NNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEI 414
               + RG   K E ++  L+LPL EL  +A AT+NFS + KLG+GGFG VYKG L D +EI
Sbjct:   486 VVSRRGYTSK-EKKSEYLELPLLELEALATATNNFSNDNKLGQGGFGIVYKGRLLDGKEI 544

Query:   415 AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI 474
             AVKRLSK+S QG  E  NE+ L +KLQH NLV+LLGCC+   EK+LIYE++ N SLDS +
Sbjct:   545 AVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHL 604

Query:   475 FDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 534
             FDQ R   L+W KRF II G ARGLLYLHQDSR RIIHRDLKASNVLLD++M PKISDFG
Sbjct:   605 FDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFG 664

Query:   535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFY 594
             +AR FG +ETE NT RVVGTYGYM+PEYA DG FS+KSDVFSFG+LLLEI+SGK+N+GFY
Sbjct:   665 MARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFY 724

Query:   595 HSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS----FNLAEVIRCIHIGLLCVQQYPEDR 650
             +S+  LNL+   W+ W EG   +++D    DS    F   E++RCI IGLLCVQ+  EDR
Sbjct:   725 NSNRDLNLLGFVWRHWKEGNELEIVDPINIDSLSSKFPTHEILRCIQIGLLCVQERAEDR 784

Query:   651 PCMPSVILMLGSEIV-LPQPKQPGYLADRKSTRLD 684
             P M SV++MLGSE   +PQPK+PG+   R     D
Sbjct:   785 PVMSSVMVMLGSETTAIPQPKRPGFCIGRSPLEAD 819

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1686 (598.6 bits), Expect = 1.6e-173, P = 1.6e-173
 Identities = 342/693 (49%), Positives = 455/693 (65%)

Query:    13 GNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTG-LERRITSWKSPDDPSPGN 71
             GN VLR  ++     +LWQSFD+P+DTLL  MK+GWD K+G   R + SWK+ DDPS G+
Sbjct:   134 GNFVLRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGD 193

Query:    72 FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPV--FNFSFVSSEDELYYT 129
             F+  +     PE  ++      YRSGPW G RFS+      PV   + SF  +  ++ Y+
Sbjct:   194 FSTKLRTSGFPEFYIYNKESITYRSGPWLGNRFSSVP-GMKPVDYIDNSFTENNQQVVYS 252

Query:   130 FDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISD 189
             + +    ++S + ++ T  L QR TW +A Q+W+     P+DLCD Y  CG+YG C  + 
Sbjct:   253 YRVNKTNIYSILSLSSTGLL-QRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANT 311

Query:   190 LPVCQCLKGFKPKSRGYV--DWSQGCVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSM 247
              P+C C+KGF+P +      D S GCVR   L+    DGF++   M+LPD T + V K +
Sbjct:   312 SPICNCIKGFEPMNEQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGI 371

Query:   248 NLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYIRMSASELG 307
              LKEC E+CL+  +C A+ N+DIR GGSGC +W G L D+R++  GGQDLY+R++A +L 
Sbjct:   372 GLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFDIRNYAKGGQDLYVRVAAGDLE 431

Query:   308 AKGEPTTKIV--LIVISTAALLAVVIAAGYLIHKSRRNI-----VVNIARYFRENRNN-- 358
              K   + KI+   I +S   LL+ +I   +   K +R+I     +V++ R      N   
Sbjct:   432 DKRIKSKKIIGSSIGVSILLLLSFIIFH-FWKRKQKRSITIQTPIVDLVRSQDSLMNELV 490

Query:   359 RGTEQKNEDQN-ID-LDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAV 416
             + +      +N  D L+LPL E   +A AT+NFS + KLG+GGFG VYKG L D +EIAV
Sbjct:   491 KASRSYTSKENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAV 550

Query:   417 KRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD 476
             KRLSK+S QG  E  NE+ L +KLQH NLV+LLGCC+   EK+LIYE++ N SLDS +FD
Sbjct:   551 KRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFD 610

Query:   477 QERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 536
             Q R   L+W KRF II G ARGLLYLHQDSR RIIHRDLKASNVLLD++M PKISDFG+A
Sbjct:   611 QTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMA 670

Query:   537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS 596
             R FG +ETE NT RVVGTYGYM+PEYA DG FS+KSDVFSFG+LLLEI+SGK+N+GFY+S
Sbjct:   671 RIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISGKRNKGFYNS 730

Query:   597 DNKLNLIRHAWKLWNEGMPSQLIDACFKDS----FNLAEVIRCIHIGLLCVQQYPEDRPC 652
             +  LNL+   W+ W EG   +++D    D+    F   E++RCI IGLLCVQ+  EDRP 
Sbjct:   731 NRDLNLLGFVWRHWKEGKELEIVDPINIDALSSEFPTHEILRCIQIGLLCVQERAEDRPV 790

Query:   653 MPSVILMLGSEIV-LPQPKQPGYLADRKSTRLD 684
             M SV++MLGSE   +PQPK+PG+   R S  +D
Sbjct:   791 MSSVMVMLGSETTAIPQPKRPGFCVGRSSLEVD 823

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 1451 (515.8 bits), Expect = 1.3e-148, P = 1.3e-148
 Identities = 315/716 (43%), Positives = 428/716 (59%)

Query:    12 SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
             +GNLVL G  + G E  LW+SF++P +  LP M L  D KTG   ++ SWKSP DPSPG 
Sbjct:   127 TGNLVLLGTTNTGDEI-LWESFEHPQNIYLPTMSLATDTKTGRSLKLRSWKSPFDPSPGR 185

Query:    72 FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSF-VSSEDELYYTF 130
             ++  +     PEL++WK     +RSGPWNG  F         +  F   +SS++    + 
Sbjct:   186 YSAGLIPLPFPELVVWKDDLLMWRSGPWNGQYFIGLPNMDYRINLFELTLSSDNRGSVSM 245

Query:   131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIIS-- 188
                   +    +++    + QR  W  A Q W+  L VP   CDTYA CG +  C  +  
Sbjct:   246 SYAGNTLLYHFLLDSEGSVFQR-DWNVAIQEWKTWLKVPSTKCDTYATCGQFASCRFNPG 304

Query:   189 DLPVCQCLKGFKPKSRGYVD---WSQGCVRDKSLNY-SRE--------DGFIKFTAMKLP 236
               P C C++GFKP+S    +   W+QGCVR   L   SR+        DGF++   MK+P
Sbjct:   305 STPPCMCIRGFKPQSYAEWNNGNWTQGCVRKAPLQCESRDNNDGSRKSDGFVRVQKMKVP 364

Query:   237 DATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQD 296
                P       N ++C E CL+N SC AY+       G GC +W G L+DM++F   G  
Sbjct:   365 H-NPQ--RSGANEQDCPESCLKNCSCTAYSFDR----GIGCLLWSGNLMDMQEFSGTGVV 417

Query:   297 LYIRMSASELGAKGEPTTKIVLIVISTAALLA-VVIAAGYLIHKSR---RNIVVNIARYF 352
              YIR++ SE   +   +  I + ++  A L A  V+ A + I K R   RN  +   R  
Sbjct:   418 FYIRLADSEFKKRTNRSIVITVTLLVGAFLFAGTVVLALWKIAKHREKNRNTRLLNERME 477

Query:   353 RENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQ 412
               + N+ G    N+ +    +LPLFE   +A AT+NFSI  KLG+GGFG VYKG L +  
Sbjct:   478 ALSSNDVGAILVNQYKL--KELPLFEFQVLAVATNNFSITNKLGQGGFGAVYKGRLQEGL 535

Query:   413 EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDS 472
             +IAVKRLS+ S QG++E  NE+++ SKLQHRNLV+LLG CI GEE++L+YEFMP   LD+
Sbjct:   536 DIAVKRLSRTSGQGVEEFVNEVVVISKLQHRNLVRLLGFCIEGEERMLVYEFMPENCLDA 595

Query:   473 FIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD 532
             ++FD  + +LLDW  RF+II G  RGL+YLH+DSRL+IIHRDLKASN+LLD+++NPKISD
Sbjct:   596 YLFDPVKQRLLDWKTRFNIIDGICRGLMYLHRDSRLKIIHRDLKASNILLDENLNPKISD 655

Query:   533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRG 592
             FGLAR F G+E E +T RVVGTYGYMAPEYA  G FS KSDVFS G++LLEIVSG++N  
Sbjct:   656 FGLARIFQGNEDEVSTVRVVGTYGYMAPEYAMGGLFSEKSDVFSLGVILLEIVSGRRNSS 715

Query:   593 FYHSDNKLNLIRHAWKLWNEGMPSQLID-ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
             FY+     NL  +AWKLWN G    L+D   F++ F   E+ RC+H+GLLCVQ +  DRP
Sbjct:   716 FYNDGQNPNLSAYAWKLWNTGEDIALVDPVIFEECFE-NEIRRCVHVGLLCVQDHANDRP 774

Query:   652 CMPSVILMLGSEIV-LPQPKQPGYLADRKSTRLDXXXXXXXXXXXXXXXXXELEGR 706
              + +VI ML SE   LP+PKQP ++  R ++ ++                 ++ GR
Sbjct:   775 SVATVIWMLSSENSNLPEPKQPAFIPRRGTSEVESSGQSDPRASINNVSLTKITGR 830

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

UNIPROTKB|O49974 KIK1 "Serine/threonine-protein kinase" [Zea mays (taxid:4577)]

 Score = 1342 (477.5 bits), Expect = 4.6e-137, P = 4.6e-137
 Identities = 292/647 (45%), Positives = 401/647 (61%)

Query:    55 ERRI-TSWKSPDDPSPGNFTWAVERQDNPELIMWK-GSRKFYRSGPWNGLRFSAATLRQN 112
             ER + TSW S  DPSPG +   ++  ++ +  +WK G+  ++RSG WNG+ F     R  
Sbjct:   181 ERMLFTSWASETDPSPGRYALGLDPGNSGQAYIWKDGNVTYWRSGQWNGVNFIGIPWR-- 238

Query:   113 PVFNFSFVSSEDEL---YYTFDLIDKAVFSRIVM-NQTLYLRQRFTWKKATQNWELQLNV 168
             P++   F  + D +   YYT+   + ++   +V+ N T      +  +K++Q+WEL    
Sbjct:   239 PLYRSGFTPAIDPVLGNYYTYTATNTSLQRFVVLPNGTDIC---YMVRKSSQDWELVWYQ 295

Query:   169 PRDLCDTYALCGDYGICIISD--LPVCQCLKGFKPKSR---GYVDWSQGCVRDKSLNYSR 223
             P + C+ YA CG    C  S      C CLKGF PK +      +WSQGC+R   L    
Sbjct:   296 PSNECEYYATCGPNAKCTASQDGKAKCTCLKGFHPKLQEQWNAGNWSQGCIRSPPLGCET 355

Query:   224 E---DGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMW 280
                 DGF+    +K PD +  WVS   +   CR  CL N SC AY  +      +GC  W
Sbjct:   356 NQSGDGFLPMGNIKWPDFS-YWVSTVGDEPGCRTVCLNNCSCGAYVYT----ATTGCLAW 410

Query:   281 FGELIDMRDFPDGGQDLYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKS 340
               ELIDM +   G   L +++ ASEL     P  KI  I+  +A +L V+ A   L  K 
Sbjct:   411 GNELIDMHELQTGAYTLNLKLPASELRGH-HPIWKIATII--SAIVLFVLAACLLLWWKH 467

Query:   341 RRNIVVNIARYFRENRNNRGTEQKNE----DQNIDLD----------LPLFELATIANAT 386
              RNI   +   +R   ++  ++Q +      Q+I  D          L ++ L  I  AT
Sbjct:   468 GRNIKDAVHGSWRSRHSSTQSQQNSAMLDISQSIRFDDDVEDGKSHELKVYSLDRIRTAT 527

Query:   387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
              NFS + KLGEGGFGPVY GTL   +E+AVKRL + S QGL+E KNE+IL +KLQHRNLV
Sbjct:   528 SNFSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQGLEEFKNEVILIAKLQHRNLV 587

Query:   447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
             +LLGCCI  EEK+L+YE+MPNKSLD+F+F+ E+ +LLDW KRF II G ARGLLYLH+DS
Sbjct:   588 RLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWKKRFDIIEGIARGLLYLHRDS 647

Query:   507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
             RLR++HRDLKASN+LLD DM PKISDFG+AR FGGD+ + NTNRVVGT+GYM+PEYA +G
Sbjct:   648 RLRVVHRDLKASNILLDADMKPKISDFGMARMFGGDQNQFNTNRVVGTFGYMSPEYAMEG 707

Query:   567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
              FSVKSDV+ FG+L+LEI++GK+   F+  ++ LN+  +AW+ WNE   ++LID   + S
Sbjct:   708 IFSVKSDVYGFGVLILEIITGKRAVSFHCHEDSLNIAGYAWRQWNEDNAAELIDPVIRAS 767

Query:   627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV-LPQPKQP 672
              ++ +V+RCIHI LLCVQ + ++RP +P+VILML ++   LP P+ P
Sbjct:   768 CSVRQVLRCIHIALLCVQDHADERPDIPTVILMLSNDSSSLPNPRPP 814

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2197709 AT1G61480 [Arabidopsis thaliana (taxid:3702)]

 Score = 1328 (472.5 bits), Expect = 1.4e-135, P = 1.4e-135
 Identities = 294/681 (43%), Positives = 403/681 (59%)

Query:    12 SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
             +GNLV+    D  S   LW+SF++  DT+LP   L ++L TG +R +TSWKS  DPSPG+
Sbjct:   126 NGNLVVI---DNNSGRTLWESFEHFGDTMLPFSNLMYNLATGEKRVLTSWKSHTDPSPGD 182

Query:    72 FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDE----LY 127
             FT  +  Q   +    +GS+ ++RSGPW   RF+   +  +  +   F   +D      +
Sbjct:   183 FTVQITPQVPSQACTMRGSKTYWRSGPWAKTRFTGIPVMDD-TYTSPFSLQQDTNGSGSF 241

Query:   128 YTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICII 187
               F+   K  +  I    +L + Q         +WEL    P + CD Y  CG +GIC++
Sbjct:   242 TYFERNFKLSYIMITSEGSLKIFQH-----NGMDWELNFEAPENSCDIYGFCGPFGICVM 296

Query:   188 SDLPVCQCLKGFKPKS-----RGYVDWSQGCVRDKSL------NYSREDGFIKFTAMKLP 236
             S  P C+C KGF PKS     RG  +W+ GCVR   L      N    +GF     +K P
Sbjct:   297 SVPPKCKCFKGFVPKSIEEWKRG--NWTDGCVRHTELHCQGNTNGKTVNGFYHVANIKPP 354

Query:   237 DATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQD 296
             D      +  ++ + C + CL N SC+A+   +    G GC MW  +L+D   F  GG+ 
Sbjct:   355 DFYE--FASFVDAEGCYQICLHNCSCLAFAYIN----GIGCLMWNQDLMDAVQFSAGGEI 408

Query:   297 LYIRMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGY--LIHKSRRNIVVNIARYFRE 354
             L IR+++SELG  G    KI++  I + +L  ++  A +  L +K +  +   I++   +
Sbjct:   409 LSIRLASSELG--GNKRNKIIVASIVSLSLFVILAFAAFCFLRYKVKHTVSAKISKIASK 466

Query:   355 NRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEI 414
                N   E     Q++   L  FE+ TI  ATDNFS++ KLG+GGFG VYKG L D +EI
Sbjct:   467 EAWNNDLEP----QDVS-GLKFFEMNTIQTATDNFSLSNKLGQGGFGSVYKGKLQDGKEI 521

Query:   415 AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI 474
             AVKRLS  S QG +E  NEI+L SKLQH+NLV++LGCCI GEE+LL+YEF+ NKSLD+F+
Sbjct:   522 AVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEERLLVYEFLLNKSLDTFL 581

Query:   475 FDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 534
             FD  +   +DW KRF+II G ARGL YLH+DS LR+IHRDLK SN+LLD+ MNPKISDFG
Sbjct:   582 FDSRKRLEIDWPKRFNIIEGIARGLHYLHRDSCLRVIHRDLKVSNILLDEKMNPKISDFG 641

Query:   535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFY 594
             LAR + G E + NT RV GT GYMAPEYA  G FS KSD++SFG++LLEI++G+K   F 
Sbjct:   642 LARMYQGTEYQDNTRRVAGTLGYMAPEYAWTGMFSEKSDIYSFGVILLEIITGEKISRFS 701

Query:   595 HSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMP 654
             +      L+ +AW+ W E     L+D    DS +  EV RC+ IGLLCVQ  P DRP   
Sbjct:   702 YGRQGKTLLAYAWESWCESGGIDLLDKDVADSCHPLEVERCVQIGLLCVQHQPADRPNTM 761

Query:   655 SVILMLGSEIVLPQPKQPGYL 675
              ++ ML +   L  PKQP ++
Sbjct:   762 ELLSMLTTTSDLTSPKQPTFV 782

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2200923 AT1G61550 [Arabidopsis thaliana (taxid:3702)]

 Score = 1321 (470.1 bits), Expect = 7.7e-135, P = 7.7e-135
 Identities = 297/676 (43%), Positives = 411/676 (60%)

Query:    12 SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
             SGNL++  +  G +   LWQSF++  DT+LP   L ++  TG +R ++SWKS  DP PG 
Sbjct:   121 SGNLLVIDKVSGIT---LWQSFEHLGDTMLPYSSLMYNPGTGEKRVLSSWKSYTDPLPGE 177

Query:    72 FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFN-FSFVSSEDELYYTF 130
             F   +  Q  P+  + +GS+ ++RSGPW   RF+   L      + FS     +   Y F
Sbjct:   178 FVGYITTQVPPQGFIMRGSKPYWRSGPWAKTRFTGVPLTDESYTHPFSVQQDANGSVY-F 236

Query:   131 DLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDL 190
               + +  F R ++  T     + T    T +W L ++VP + CD Y +CG +G+C++S  
Sbjct:   237 SHLQRN-FKRSLLVLTSEGSLKVTHHNGT-DWVLNIDVPANTCDFYGVCGPFGLCVMSIP 294

Query:   191 PVCQCLKGFKPK-----SRGYVDWSQGCVRDKSL-----NYSRE-DGFIKFTAMKLPDAT 239
             P C+C KGF P+      RG  +W+ GCVR   L     +  R  + F     +K PD  
Sbjct:   295 PKCKCFKGFVPQFSEEWKRG--NWTGGCVRRTELLCQGNSTGRHVNVFHPVANIKPPDFY 352

Query:   240 PSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYI 299
               +VS S + +EC + CL N SC+A+   +    G GC +W  EL+D+  F  GG+ L I
Sbjct:   353 -EFVS-SGSAEECYQSCLHNCSCLAFAYIN----GIGCLIWNQELMDVMQFSVGGELLSI 406

Query:   300 RMSASELGAKGEPTTKIVLIVISTAALLAVVIAA-GYLIHKSRRNIVVNIARYFRENRNN 358
             R+++SE+G      T I+  ++S +  + +  AA G+  ++ + N +V+        RN 
Sbjct:   407 RLASSEMGGNQRKKT-IIASIVSISLFVTLASAAFGFWRYRLKHNAIVSKVSLQGAWRN- 464

Query:   359 RGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKR 418
                + K+ED +    L  FE+ TI  AT+NFS+  KLG+GGFGPVYKG L D +EIAVKR
Sbjct:   465 ---DLKSEDVS---GLYFFEMKTIEIATNNFSLVNKLGQGGFGPVYKGKLQDGKEIAVKR 518

Query:   419 LSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE 478
             LS  S QG +E  NEI+L SKLQH NLV++LGCCI GEE+LL+YEFM NKSLD+FIFD  
Sbjct:   519 LSSSSGQGKEEFMNEILLISKLQHINLVRILGCCIEGEERLLVYEFMVNKSLDTFIFDSR 578

Query:   479 RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
             +   +DW KRF II G ARGLLYLH+DSRLRIIHRD+K SN+LLD  MNPKISDFGLAR 
Sbjct:   579 KRVEIDWPKRFSIIQGIARGLLYLHRDSRLRIIHRDVKVSNILLDDKMNPKISDFGLARM 638

Query:   539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN 598
             + G + + NT R+VGT GYM+PEYA  G FS KSD +SFG+LLLE++SG+K   F +   
Sbjct:   639 YEGTKYQDNTRRIVGTLGYMSPEYAWTGVFSEKSDTYSFGVLLLEVISGEKISRFSYDKE 698

Query:   599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL 658
             + NL+ +AW+ W E      +D    DS + +EV RC+ IGLLCVQ  P DRP    ++ 
Sbjct:   699 RKNLLAYAWESWCENGGVGFLDKDATDSCHPSEVGRCVQIGLLCVQHQPADRPNTLELLS 758

Query:   659 MLGSEIVLPQPKQPGY 674
             ML +   LP PK+P +
Sbjct:   759 MLTTTSDLPLPKEPTF 774

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2200888 AT1G61500 [Arabidopsis thaliana (taxid:3702)]

 Score = 1320 (469.7 bits), Expect = 9.8e-135, P = 9.8e-135
 Identities = 301/675 (44%), Positives = 398/675 (58%)

Query:    12 SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGN 71
             SGNL +    D  SE  LWQSFD+  DTLL    L ++L T  +R +TSWKS  DPSPG+
Sbjct:   127 SGNLKVI---DNVSERALWQSFDHLGDTLLHTSSLTYNLATAEKRVLTSWKSYTDPSPGD 183

Query:    72 FTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSED---ELYY 128
             F   +  Q   +  + +GS  ++RSGPW   RF+         +   F   +D     Y 
Sbjct:   184 FLGQITPQVPSQGFVMRGSTPYWRSGPWAKTRFTGIPFMDES-YTGPFTLHQDVNGSGYL 242

Query:   129 TFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGICIIS 188
             T+   D  + SRI +     ++    ++     WEL    P+ LCD Y  CG +G+C++S
Sbjct:   243 TYFQRDYKL-SRITLTSEGSIKM---FRDNGMGWELYYEAPKKLCDFYGACGPFGLCVMS 298

Query:   189 DLPVCQCLKGFKPKS-----RGYVDWSQGCVRDKSL----NYSREDGFIKFTAMKLPDAT 239
               P+C+C +GF PKS     RG  +W+ GCVR   L    N + ED         +    
Sbjct:   299 PSPMCKCFRGFVPKSVEEWKRG--NWTGGCVRHTELDCLGNSTGEDADDFHQIANIKPPD 356

Query:   240 PSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGGQDLYI 299
                 + S+N +EC ++C+ N SC+A+    I+G   GC +W  +L+D   F   G+ L I
Sbjct:   357 FYEFASSVNAEECHQRCVHNCSCLAFAY--IKG--IGCLVWNQDLMDAVQFSATGELLSI 412

Query:   300 RMSASELGAKGEPTTKIVLIVISTAALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNR 359
             R++ SEL       T +  IV  T  ++    A G  + + R   V +IA   ++   N 
Sbjct:   413 RLARSELDGNKRKKTIVASIVSLTLFMILGFTAFG--VWRCR---VEHIAHISKDAWKN- 466

Query:   360 GTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRL 419
               + K +D      L  F++ TI NAT+NFS++ KLG+GGFG VYKG L D +EIAVKRL
Sbjct:   467 --DLKPQDVP---GLDFFDMHTIQNATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKRL 521

Query:   420 SKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQER 479
             S  S QG +E  NEI+L SKLQHRNLV++LGCCI  EEKLLIYEFM NKSLD+F+FD  +
Sbjct:   522 SSSSGQGKEEFMNEIVLISKLQHRNLVRVLGCCIEEEEKLLIYEFMVNKSLDTFLFDSRK 581

Query:   480 CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 539
                +DW KRF II G ARGLLYLH DSRLR+IHRDLK SN+LLD+ MNPKISDFGLAR +
Sbjct:   582 RLEIDWPKRFDIIQGIARGLLYLHHDSRLRVIHRDLKVSNILLDEKMNPKISDFGLARMY 641

Query:   540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
              G E + NT RVVGT GYM+PEYA  G FS KSD++SFG+L+LEI+SG+K   F +    
Sbjct:   642 QGTEYQDNTRRVVGTLGYMSPEYAWTGMFSEKSDIYSFGVLMLEIISGEKISRFSYGVEG 701

Query:   600 LNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM 659
               LI +AW+ W+E     L+D    DS +  EV RCI IGLLCVQ  P DRP    ++ M
Sbjct:   702 KTLIAYAWESWSEYRGIDLLDQDLADSCHPLEVGRCIQIGLLCVQHQPADRPNTLELLAM 761

Query:   660 LGSEIVLPQPKQPGY 674
             L +   LP PKQP +
Sbjct:   762 LTTTSDLPSPKQPTF 776

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O81905	SD18_ARATH	2, ., 7, ., 1, 1, ., 1	0.5104	0.9830	0.8164	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.914
3rd Layer	2.7.11	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.254.15.1 annotation not avaliable (816 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	706
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-54
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-54
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-52
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-50
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-49
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-48
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-48
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-44
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-39
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	7e-39
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-36
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-35
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-35
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-33
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-32
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-32
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-32
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-31
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-31
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-30
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	6e-30
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	8e-30
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-29
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-29
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-29
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-28
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-28
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-28
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	6e-28
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-27
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-27
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	7e-27
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-26
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-26
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	6e-26
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	8e-26
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-25
pfam08276	66	pfam08276, PAN_2, PAN-like domain	1e-25
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-25
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-25
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-25
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	2e-25
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	3e-25
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-25
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-25
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-24
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-24
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-24
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-24
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-24
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	5e-24
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	6e-24
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-24
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	7e-24
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	8e-24
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	8e-24
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	9e-24
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	9e-24
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-23
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-23
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-23
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-23
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-23
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-23
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-23
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-23
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-23
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-23
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-23
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	6e-23
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	6e-23
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	8e-23
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-22
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-22
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-22
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-22
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-22
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-22
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-22
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-22
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-22
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	5e-22
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	6e-22
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	6e-22
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	7e-22
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	9e-22
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-21
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-21
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-21
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-21
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	3e-21
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	3e-21
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-21
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	5e-21
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	5e-21
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	6e-21
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-20
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-20
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	1e-20
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-20
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-20
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-20
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-20
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-20
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-20
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	6e-20
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	6e-20
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	7e-20
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-19
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-19
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-19
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-19
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-19
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	2e-19
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-19
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-19
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-19
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-19
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-19
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-19
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	4e-19
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-19
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-19
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	6e-19
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	8e-19
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	8e-19
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	8e-19
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	9e-19
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	3e-18
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	3e-18
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	4e-18
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	4e-18
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-18
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	5e-18
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	5e-18
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	6e-18
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	6e-18
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	7e-18
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	8e-18
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	9e-18
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-17
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-17
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-17
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-17
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-17
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-17
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-17
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-17
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-17
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	3e-17
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-17
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	5e-17
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-17
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	6e-17
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	6e-17
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	6e-17
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	8e-17
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	8e-17
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	9e-17
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	9e-17
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-16
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-16
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-16
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-16
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	2e-16
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-16
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-16
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-16
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	3e-16
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-16
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-16
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	5e-16
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-15
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-15
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-15
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	4e-15
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	5e-15
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	6e-15
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	6e-15
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	8e-15
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	9e-15
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	9e-15
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-14
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	1e-14
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-14
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-14
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-14
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-14
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-14
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	4e-14
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	5e-14
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	6e-14
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	6e-14
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	7e-14
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	7e-14
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	9e-14
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-13
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-13
smart00473	78	smart00473, PAN_AP, divergent subfamily of APPLE d	1e-13
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	1e-13
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	1e-13
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-13
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-13
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-13
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-13
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-13
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-13
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	3e-13
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	3e-13
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	4e-13
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	4e-13
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	4e-13
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	5e-13
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	7e-13
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	8e-13
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	8e-13
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	9e-13
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-12
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-12
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-12
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-12
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-12
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-12
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-12
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	4e-12
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-12
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-12
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	5e-12
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	5e-12
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	6e-12
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	6e-12
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	6e-12
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	6e-12
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	7e-12
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-11
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	1e-11
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	2e-11
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-11
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-11
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-11
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-11
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	4e-11
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-11
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	5e-11
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	6e-11
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	6e-11
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	7e-11
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	7e-11
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	8e-11
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-10
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-10
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	1e-10
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-10
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	2e-10
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	3e-10
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-10
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	5e-10
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	5e-10
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	6e-10
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	7e-10
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	8e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	9e-10
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	1e-09
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-09
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	1e-09
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	3e-09
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-09
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-09
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	5e-09
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	6e-09
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	6e-09
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	7e-09
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	8e-09
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	9e-09
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	9e-09
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	9e-09
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-08
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-08
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-08
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	3e-08
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	4e-08
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	4e-08
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	8e-08
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	9e-08
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	9e-08
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-07
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-07
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	3e-07
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	3e-07
pfam11883	48	pfam11883, DUF3403, Domain of unknown function (DU	4e-07
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	9e-07
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	9e-07
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	1e-06
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-06
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	4e-06
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	7e-06
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	1e-05
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-05
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-05
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	2e-05
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	2e-05
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	3e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	5e-05
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	7e-05
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-04
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	1e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	5e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	0.001
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	0.003
pfam08277	71	pfam08277, PAN_3, PAN-like domain	0.004

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  187 bits (478), Expect = 1e-54
 Identities = 81/206 (39%), Positives = 112/206 (54%), Gaps = 18/206 (8%)

Query: 390 SINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHR 443
           ++ KKLGEG FG VYKG L       + E+AVK L +  SEQ ++E   E  +  KL H 
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VKLLG C   E   ++ E+M    L S++  ++    L  S         ARG+ YL 
Sbjct: 62  NVVKLLGVCTEEEPLYIVMEYMEGGDLLSYL--RKNRPKLSLSDLLSFALQIARGMEYLE 119

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAP 560
                  IHRDL A N L+ +++  KISDFGL+R    D  + +  R  G      +MAP
Sbjct: 120 ---SKNFIHRDLAARNCLVGENLVVKISDFGLSR----DLYDDDYYRKRGGKLPIRWMAP 172

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVS 586
           E   +G+F+ KSDV+SFG+LL EI +
Sbjct: 173 ESLKEGKFTSKSDVWSFGVLLWEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  187 bits (477), Expect = 2e-54
 Identities = 85/206 (41%), Positives = 115/206 (55%), Gaps = 17/206 (8%)

Query: 390 SINKKLGEGGFGPVYKGTLAD-----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHR 443
           ++ KKLGEG FG VYKGTL       E E+AVK L +  SEQ ++E   E  +  KL H 
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VKLLG C   E  +++ E+MP   L  ++    R K L  S         ARG+ YL 
Sbjct: 62  NIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKN-RPKELSLSDLLSFALQIARGMEYLE 120

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAP 560
                  IHRDL A N L+ +++  KISDFGL+R    D  + +  +V G      +MAP
Sbjct: 121 ---SKNFIHRDLAARNCLVGENLVVKISDFGLSR----DLYDDDYYKVKGGKLPIRWMAP 173

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVS 586
           E   +G+F+ KSDV+SFG+LL EI +
Sbjct: 174 ESLKEGKFTSKSDVWSFGVLLWEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  181 bits (462), Expect = 3e-52
 Identities = 95/287 (33%), Positives = 131/287 (45%), Gaps = 45/287 (15%)

Query: 393 KKLGEGGFGPVYKGTL----ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVK 447
           KKLGEG FG VYKG L        E+AVK L +  SE+  K+   E  +  KL H N+V+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRFHIICGTARGLLY 501
           LLG C   E   L+ E+M    L  ++      F       L            A+G+ Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTNRVVGTYGYMAP 560
           L      + +HRDL A N L+ +D+  KISDFGL+R  +  D     T   +    +MAP
Sbjct: 121 LAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR-WMAP 176

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVS-------GKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           E   DG F+ KSDV+SFG+LL EI +       G  N      +  L  +R  ++L    
Sbjct: 177 ESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN------EEVLEYLRKGYRL---P 227

Query: 614 MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
            P    + C  +   L E++        C Q  PEDRP    ++  L
Sbjct: 228 KP----EYCPDE---LYELMLS------CWQLDPEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  176 bits (450), Expect = 1e-50
 Identities = 79/210 (37%), Positives = 110/210 (52%), Gaps = 21/210 (10%)

Query: 389 FSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQH 442
             + KKLGEG FG VYKGTL       E ++AVK L +  SE+  +E   E  +  KL H
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSH 60

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+V+LLG C  GE   ++ E+MP   L  F+  ++  + L       +    A+G+ YL
Sbjct: 61  PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFL--RKHGEKLTLKDLLQMALQIAKGMEYL 118

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY----- 557
                   +HRDL A N L+ +++  KISDFGL+R    D+            G      
Sbjct: 119 E---SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYY-----RKRGGGKLPIKW 170

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           MAPE   DG+F+ KSDV+SFG+LL EI + 
Sbjct: 171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTL 200

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  172 bits (437), Expect = 2e-49
 Identities = 73/194 (37%), Positives = 100/194 (51%), Gaps = 11/194 (5%)

Query: 395 LGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHRNLVKLLGCC 452
           LGEGGFG VY        +++A+K + K     L E L  EI +  KL H N+VKL G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                  L+ E+    SL   +  +E    L   +   I+     GL YLH      IIH
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLL--KENEGKLSEDEILRILLQILEGLEYLHS---NGIIH 115

Query: 513 RDLKASNVLLDQD-MNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YASDGQFSV 570
           RDLK  N+LLD D    K++DFGL++    D++   T  +VGT  YMAPE     G +S 
Sbjct: 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT--IVGTPAYMAPEVLLGKGYYSE 173

Query: 571 KSDVFSFGILLLEI 584
           KSD++S G++L E+
Sbjct: 174 KSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  171 bits (436), Expect = 1e-48
 Identities = 71/218 (32%), Positives = 109/218 (50%), Gaps = 13/218 (5%)

Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHRNLV 446
           + I +KLGEG FG VY        + +A+K + K   +  +E +  EI +  KL+H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       ++  L+ E+     L   +  ++R +L +   RF  +      L YLH   
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLL--KKRGRLSEDEARF-YLRQILSALEYLHS-- 115

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
              I+HRDLK  N+LLD+D + K++DFGLAR     E        VGT  YMAPE     
Sbjct: 116 -KGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEK---LTTFVGTPEYMAPEVLLGK 171

Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIR 604
            +    D++S G++L E+++GK    F   D  L L +
Sbjct: 172 GYGKAVDIWSLGVILYELLTGK--PPFPGDDQLLELFK 207

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  169 bits (431), Expect = 5e-48
 Identities = 74/250 (29%), Positives = 108/250 (43%), Gaps = 22/250 (8%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK--ISEQGLKELKNEIILFSKLQHRNL 445
           + + +KLG G FG VYK       +I AVK L K     +  +  + EI +  +L H N+
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V+L+      +   L+ E+     L  ++        L   +   I     RGL YLH  
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRG---GPLSEDEAKKIALQILRGLEYLH-- 115

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YAS 564
               IIHRDLK  N+LLD++   KI+DFGLA+      +  +    VGT  YMAPE    
Sbjct: 116 -SNGIIHRDLKPENILLDENGVVKIADFGLAKKLLK--SSSSLTTFVGTPWYMAPEVLLG 172

Query: 565 DGQFSVKSDVFSFGILLLEIVSGK---KNRGFYHSDNKLNLIRHA-----WKLWNEGMPS 616
              +  K DV+S G++L E+++GK              +  I           W+ G   
Sbjct: 173 GNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEE 232

Query: 617 --QLIDACFK 624
              LI  C  
Sbjct: 233 AKDLIKKCLN 242

Length = 260

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  159 bits (404), Expect = 3e-44
 Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 19/210 (9%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADE-QEIAVK--RLSKISEQGLKELKNEIILFSKLQHRN 444
            ++  + LG G FG VY     D  + +AVK   LS  SE+ L+ L+ EI + S LQH N
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60

Query: 445 LVKLLGCCIHGEEK-LLIY-EFMPNKSLDSFIFDQERCKLLDWS--KRF--HIICGTARG 498
           +V+  G     E+  L I+ E++   SL S +   ++   L     +++   I+ G    
Sbjct: 61  IVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL---KKFGKLPEPVIRKYTRQILEG---- 113

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L YLH      I+HRD+K +N+L+D D   K++DFG A+  G  ET   T  V GT  +M
Sbjct: 114 LAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWM 170

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE     ++   +D++S G  ++E+ +GK
Sbjct: 171 APEVIRGEEYGRAADIWSLGCTVIEMATGK 200

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  146 bits (371), Expect = 1e-39
 Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 9/201 (4%)

Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           F I +K+G+GGFG VYK       +E+A+K +   S++  +++ NEI +  K +H N+VK
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
             G  +  +E  ++ EF    SL   +  +   + L  S+  ++     +GL YLH    
Sbjct: 62  YYGSYLKKDELWIVMEFCSGGSLKDLL--KSTNQTLTESQIAYVCKELLKGLEYLHS--- 116

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
             IIHRD+KA+N+LL  D   K+ DFGL+            N +VGT  +MAPE  +   
Sbjct: 117 NGIIHRDIKAANILLTSDGEVKLIDFGLSAQL---SDTKARNTMVGTPYWMAPEVINGKP 173

Query: 568 FSVKSDVFSFGILLLEIVSGK 588
           +  K+D++S GI  +E+  GK
Sbjct: 174 YDYKADIWSLGITAIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score =  138 bits (351), Expect = 7e-39
 Identities = 43/111 (38%), Positives = 72/111 (64%), Gaps = 2/111 (1%)

Query: 94  YRSGPWNGLRFSAA-TLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQR 152
           +RSGPWNG+RFS    +++   + ++F  + +E+YYT+ + + +++SR+ ++    L +R
Sbjct: 1   WRSGPWNGIRFSGIPEMQKLSYYVYNFTENNEEVYYTYRMTNNSIYSRLTLSSEGSL-ER 59

Query: 153 FTWKKATQNWELQLNVPRDLCDTYALCGDYGICIISDLPVCQCLKGFKPKS 203
           FTW   +Q+W L  + P+D CD Y  CG YG C ++  P C C+KGF PK+
Sbjct: 60  FTWIPNSQDWNLFWSAPKDQCDVYGRCGPYGYCDVNTSPKCNCIKGFVPKN 110

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  137 bits (346), Expect = 3e-36
 Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 37/272 (13%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           F++ +KLG G FG V++G   +   +A+K L        ++ + E+    +L+H++L+ L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
              C  GE   +I E M   SL +F+   E  ++L  +    + C  A G+ YL +    
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQ--- 123

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF 568
             IHRDL A N+L+ +D+  K++DFGLAR    D    +  ++   Y + APE AS G F
Sbjct: 124 NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI--PYKWTAPEAASHGTF 181

Query: 569 SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ----LIDACFK 624
           S KSDV+SFGILL E+ +     G               ++   GM +      I A ++
Sbjct: 182 STKSDVWSFGILLYEMFT----YG---------------QVPYPGMNNHEVYDQITAGYR 222

Query: 625 DSFNLAEVIRCIH----IGLLCVQQYPEDRPC 652
               +    +C      I L C    PEDRP 
Sbjct: 223 ----MPCPAKCPQEIYKIMLECWAAEPEDRPS 250

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  134 bits (339), Expect = 2e-35
 Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 31/214 (14%)

Query: 388 NFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLS--KISEQGLKELKNEIILFSKLQHRN 444
           N+ +   +G G FG VYKG  L     +A+K++S  KI E+ LK +  EI L   L+H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 445 LVKLLGCCIHGEEKLLIY-EFMPNKSLDSFIFDQERCKLLDWSKRFH------IICGTA- 496
           +VK +G  I   + L I  E+  N SL   I            K+F       +      
Sbjct: 61  IVKYIG-SIETSDSLYIILEYAENGSLRQII------------KKFGPFPESLVAVYVYQ 107

Query: 497 --RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
             +GL YLH+     +IHRD+KA+N+L  +D   K++DFG+A        +  +  VVGT
Sbjct: 108 VLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS--VVGT 162

Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             +MAPE       S  SD++S G  ++E+++G 
Sbjct: 163 PYWMAPEVIEMSGASTASDIWSLGCTVIELLTGN 196

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  135 bits (341), Expect = 2e-35
 Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 27/227 (11%)

Query: 371 DLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE 429
           +L   L ++ +  +  + +   +K+GEG  G VYK T  A  +E+A+K++ ++ +Q  + 
Sbjct: 3   ELKAALKDIVSEGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKM-RLRKQNKEL 61

Query: 430 LKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
           + NEI++    +H N+V      + G+E  ++ E+M   SL           ++  +   
Sbjct: 62  IINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSL---------TDIITQNFVR 112

Query: 490 ----HI--ICG-TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 542
                I  +C    +GL YLH      +IHRD+K+ N+LL +D + K++DFG    F   
Sbjct: 113 MNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFG----FAAQ 165

Query: 543 ETEGNTNR--VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            T+  + R  VVGT  +MAPE      +  K D++S GI+ +E+  G
Sbjct: 166 LTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  131 bits (329), Expect = 4e-33
 Identities = 88/330 (26%), Positives = 135/330 (40%), Gaps = 27/330 (8%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH-R 443
           ++ I +KLGEG FG VY     D + +A+K L+K      + ++    EI + + L H  
Sbjct: 1   SYRILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VKL           L+ E++   SL+  +    R   L  S+   I+      L YLH
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118

Query: 504 QDSRLRIIHRDLKASNVLLDQDMN-PKISDFGLARAFGGDETEGN----TNRVVGTYGYM 558
                 IIHRD+K  N+LLD+D    K+ DFGLA+      +  +     +  VGT GYM
Sbjct: 119 ---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYM 175

Query: 559 APEYA---SDGQFSVKSDVFSFGILLLEIVSGKK-NRGFYHSDNKLNLIRHAWKLWNEGM 614
           APE     S    S  SD++S GI L E+++G     G  +S      ++   +L    +
Sbjct: 176 APEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235

Query: 615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGY 674
            S L       S           +    + + P++R    S +    S  +L   K    
Sbjct: 236 ASPL-----SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDL----SHDLLAHLKLKES 286

Query: 675 LADRKSTRLDSSLSMPESSSTNTITISELE 704
                    DS+        +    IS L 
Sbjct: 287 DLSDLLKPDDSAPLRLSLPPSLEALISSLN 316

Length = 384

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  127 bits (320), Expect = 1e-32
 Identities = 75/201 (37%), Positives = 104/201 (51%), Gaps = 12/201 (5%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
             + +KLG G FG V+ GT     ++AVK L K      +    E  +  KL+H  LV+L
Sbjct: 8   LKLERKLGAGQFGEVWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQL 66

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
              C   E   ++ E+M   SL  F+   E  KL    +   +    A G+ YL      
Sbjct: 67  YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLR-LPQLVDMAAQIAEGMAYLE---SR 122

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNTNRVVGTYGYMAPEYASD 565
             IHRDL A N+L+ +++  KI+DFGLAR    DE    EG    +  T    APE A+ 
Sbjct: 123 NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWT----APEAANY 178

Query: 566 GQFSVKSDVFSFGILLLEIVS 586
           G+F++KSDV+SFGILL EIV+
Sbjct: 179 GRFTIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  125 bits (315), Expect = 6e-32
 Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 24/208 (11%)

Query: 393 KKLGEGGFGPVYKGTLADEQ-----EIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLV 446
           K+LGEG FG V              ++AVK L+    EQ   + + EI +   L H N+V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 447 KLLGCC--IHGEEKLLIYEFMPNKSLDSFI----FDQERCKLLDWSKRFHIICGTARGLL 500
           K  G C    G    LI E++P+ SL  ++          +LL +S +   IC   +G+ 
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQ---IC---KGMD 123

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNRVVGTYGYM 558
           YL      R IHRDL A N+L++ +   KISDFGLA+      D            + Y 
Sbjct: 124 YLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY- 179

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVS 586
           APE     +FS  SDV+SFG+ L E+ +
Sbjct: 180 APECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  124 bits (313), Expect = 7e-32
 Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 24/227 (10%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKR--LSKISEQGLKELKNEIILFSKLQHRN 444
            + I K++G+G FG VY     +D +   +K   LS +SE+  ++  NE+ +  KL H N
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERC-------KLLDWSKRFHIICGTAR 497
           ++K         +  ++ E+     L   I  Q++        ++LDW   F  +C    
Sbjct: 61  IIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDW---FVQLC---L 114

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH  SR +I+HRD+K  N+ L  +   K+ DFG+++          T  VVGT  Y
Sbjct: 115 ALKYLH--SR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT--VVGTPYY 169

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIR 604
           ++PE   +  ++ KSD++S G +L E+ + K    F   +N L L  
Sbjct: 170 LSPELCQNKPYNYKSDIWSLGCVLYELCTLK--HPFE-GENLLELAL 213

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  122 bits (309), Expect = 3e-31
 Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRL-SKISEQGLKELKNEI-ILFSKLQHR 443
            +    K LG+G  G VYK       +I A+K++     E+  K+L  E+  L S  +  
Sbjct: 1   SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESP 59

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA-----RG 498
            +VK  G      E  ++ E+M   SL   +   ++       +    +         +G
Sbjct: 60  YVVKCYGAFYKEGEISIVLEYMDGGSLADLL---KKVGK--IPEP---VLAYIARQILKG 111

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L YLH      IIHRD+K SN+L++     KI+DFG+++    + T    N  VGT  YM
Sbjct: 112 LDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVL--ENTLDQCNTFVGTVTYM 167

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           +PE      +S  +D++S G+ LLE   GK
Sbjct: 168 SPERIQGESYSYAADIWSLGLTLLECALGK 197

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  121 bits (307), Expect = 5e-31
 Identities = 70/211 (33%), Positives = 104/211 (49%), Gaps = 16/211 (7%)

Query: 395 LGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+G FG V      D  ++ A+K L K   I  + ++    E  + S++ H  +VKL  
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH- 59

Query: 451 CCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
                EEKL L+ E+ P   L S +  +E     + ++ +         L YLH    L 
Sbjct: 60  YAFQTEEKLYLVLEYAPGGELFSHL-SKEGRFSEERARFY--AAEIVLALEYLH---SLG 113

Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFS 569
           II+RDLK  N+LLD D + K++DFGLA+    + +  NT    GT  Y+APE      + 
Sbjct: 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT--FCGTPEYLAPEVLLGKGYG 171

Query: 570 VKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
              D +S G+LL E+++GK    FY  D K 
Sbjct: 172 KAVDWWSLGVLLYEMLTGK--PPFYAEDRKE 200

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  119 bits (300), Expect = 4e-30
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 10/201 (4%)

Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           F I +KLGEG +G VYK       Q +A+K +    E+ L+E+  EI +  +     +VK
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIVK 62

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
             G      +  ++ E+    S+   +  +   K L   +   I+  T +GL YLH    
Sbjct: 63  YYGSYFKNTDLWIVMEYCGAGSVSDIM--KITNKTLTEEEIAAILYQTLKGLEYLHS--- 117

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
            + IHRD+KA N+LL+++   K++DFG++       T    N V+GT  +MAPE   +  
Sbjct: 118 NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD--TMAKRNTVIGTPFWMAPEVIQEIG 175

Query: 568 FSVKSDVFSFGILLLEIVSGK 588
           ++ K+D++S GI  +E+  GK
Sbjct: 176 YNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score =  119 bits (300), Expect = 6e-30
 Identities = 72/215 (33%), Positives = 109/215 (50%), Gaps = 25/215 (11%)

Query: 393 KKLGEGGFGPVYKGTLADE------QEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNL 445
           ++LGEG FG VYKG L           +A+K L + +E  ++ E + E  L S LQH N+
Sbjct: 11  EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNI 70

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIF-------------DQERCKLLDWSKRFHII 492
           V LLG C   +   +++E++ +  L  F+              D+     LD S   HI 
Sbjct: 71  VCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIA 130

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTNRV 551
              A G+ YL   S    +HRDL A N L+ + +  KISDFGL+R  +  D     +  +
Sbjct: 131 IQIAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSL 187

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +    +M PE    G+F+ +SD++SFG++L EI S
Sbjct: 188 LPVR-WMPPEAILYGKFTTESDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  119 bits (300), Expect = 8e-30
 Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 41/231 (17%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK---ISEQGLKELKNEIILFSKL-Q 441
           D+F   K +GEG F  V         +E A+K L K   I E+ +K +K E  + ++L  
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGT 495
           H  ++KL       EE L  + E+ PN  L  +I      D++  +              
Sbjct: 61  HPGIIKLY-YTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTR--------FYAAEI 111

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV---- 551
              L YLH      IIHRDLK  N+LLD+DM+ KI+DFG A+    + +  +        
Sbjct: 112 LLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNI 168

Query: 552 --------------VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
                         VGT  Y++PE  ++      SD+++ G ++ ++++GK
Sbjct: 169 DSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score =  117 bits (294), Expect = 3e-29
 Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 29/234 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKISEQGLKE-LKNEIILFSK 439
           D   + ++LGEG FG V+ G         D++ +AVK L + +    ++  + E  L + 
Sbjct: 5   DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTN 64

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF---------IFDQER--CKLLDWSKR 488
            QH N+VK  G C  G+  ++++E+M +  L+ F                    L  S+ 
Sbjct: 65  FQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQL 124

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
             I    A G++YL   +    +HRDL   N L+  D+  KI DFG++R    D    + 
Sbjct: 125 LQIAVQIASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR----DVYTTDY 177

Query: 549 NRVVGT----YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN 598
            RV G       +M PE     +F+ +SDV+SFG++L EI +  K   +  S+ 
Sbjct: 178 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE 231

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score =  116 bits (293), Expect = 4e-29
 Identities = 94/281 (33%), Positives = 129/281 (45%), Gaps = 49/281 (17%)

Query: 395 LGEGGFGPVYKGTLAD-------EQEIAVKRLSK---ISEQGLKELKNEIILFSKLQHRN 444
           LG G FG VY+GT  D          +AVK L K     E+  KE   E  L S   H N
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEK--KEFLKEAHLMSNFNHPN 60

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK----LLDWSKRFHIICGTARGLL 500
           +VKLLG C+  E + +I E M    L S++ D    +    LL   +   I    A+G +
Sbjct: 61  IVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120

Query: 501 YLHQDSRLRIIHRDLKASNVLL-----DQDMNPKISDFGLARAFGGDETEGNTNRVVG-- 553
           YL Q   +  IHRDL A N L+     D D   KI DFGLAR    D  + +  R  G  
Sbjct: 121 YLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR----DIYKSDYYRKEGEG 173

Query: 554 --TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLW 610
                +MAPE   DG+F+ +SDV+SFG+L+ EI++ G++    Y + N   +++H     
Sbjct: 174 LLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP---YPALNNQEVLQHV---- 226

Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
             G   Q  + C    + L            C  Q P +RP
Sbjct: 227 TAGGRLQKPENCPDKIYQLM---------TNCWAQDPSERP 258

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  115 bits (291), Expect = 5e-29
 Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 23/198 (11%)

Query: 395 LGEGGFGPVYKGTLADEQEIAVKRL---SKISEQGLKELKNEIILFSKLQHRNLVKLLGC 451
           +G+G FG V  G     Q++AVK L   S  ++  L E      + + L+H NLV+LLG 
Sbjct: 14  IGKGEFGDVMLGDYRG-QKVAVKCLKDDSTAAQAFLAEAS----VMTTLRHPNLVQLLGV 68

Query: 452 CIHGEEKLLIYEFMPNKSLDSFIFDQERCKL-LDWSKRFHIICGTARGLLYLHQDSRLRI 510
            + G    ++ E+M   SL  ++  + R  + L     F +      G+ YL +      
Sbjct: 69  VLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFAL--DVCEGMEYLEEK---NF 123

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYASDGQF 568
           +HRDL A NVL+ +D+  K+SDFGLA+       E +  +  G     + APE   + +F
Sbjct: 124 VHRDLAARNVLVSEDLVAKVSDFGLAK-------EASQGQDSGKLPVKWTAPEALREKKF 176

Query: 569 SVKSDVFSFGILLLEIVS 586
           S KSDV+SFGILL EI S
Sbjct: 177 STKSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  114 bits (287), Expect = 2e-28
 Identities = 69/197 (35%), Positives = 98/197 (49%), Gaps = 12/197 (6%)

Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCC 452
           +KLG G FG V++G   +   +AVK L K      K+   E  +  KL+H  L++L   C
Sbjct: 12  RKLGAGQFGEVWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVC 70

Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
              E   ++ E M   SL  ++      + L   +   +    A G+ YL   +    IH
Sbjct: 71  TLEEPIYIVTELMKYGSLLEYLQGGAG-RALKLPQLIDMAAQVASGMAYLEAQN---YIH 126

Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAPEYASDGQFS 569
           RDL A NVL+ ++   K++DFGLAR    D  E       G      + APE A   +FS
Sbjct: 127 RDLAARNVLVGENNICKVADFGLARVIKEDIYEARE----GAKFPIKWTAPEAALYNRFS 182

Query: 570 VKSDVFSFGILLLEIVS 586
           +KSDV+SFGILL EIV+
Sbjct: 183 IKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  114 bits (287), Expect = 3e-28
 Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 10/205 (4%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRL-SKISEQGLKELKNEIILFSKLQ 441
              +I K +G G FG V +G L      E ++A+K L +  S++   +   E  +  +  
Sbjct: 4   SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD 63

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N+++L G        ++I E+M N SLD F+  +E        +   ++ G A G+ Y
Sbjct: 64  HPNIIRLEGVVTKSRPVMIITEYMENGSLDKFL--RENDGKFTVGQLVGMLRGIASGMKY 121

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L   S +  +HRDL A N+L++ ++  K+SDFGL+R     E    T        + APE
Sbjct: 122 L---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPE 178

Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +F+  SDV+SFGI++ E++S
Sbjct: 179 AIAYRKFTSASDVWSFGIVMWEVMS 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  114 bits (287), Expect = 3e-28
 Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 23/209 (11%)

Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRL-SKISEQGLKELKNEIILFSKLQHRNLV 446
           K LG G FG VYKG    E E     +A+K L  + S +  KE+ +E  + + + H ++V
Sbjct: 13  KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVV 72

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK-----LLDWSKRFHIICGTARGLLY 501
           +LLG C+   +  LI + MP   L  ++    +       LL+W  +       A+G+ Y
Sbjct: 73  RLLGICL-SSQVQLITQLMPLGCLLDYV-RNHKDNIGSQYLLNWCVQI------AKGMSY 124

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L +    R++HRDL A NVL+    + KI+DFGLA+    DE E +         +MA E
Sbjct: 125 LEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALE 181

Query: 562 YASDGQFSVKSDVFSFGILLLEIVS-GKK 589
                 ++ KSDV+S+G+ + E+++ G K
Sbjct: 182 SILHRIYTHKSDVWSYGVTVWELMTFGAK 210

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score =  113 bits (283), Expect = 6e-28
 Identities = 88/268 (32%), Positives = 131/268 (48%), Gaps = 28/268 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + KKLG G FG V+ G      ++A+K L K      +    E  L  +LQH  LV
Sbjct: 6   ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSL-KQGSMSPEAFLAEANLMKQLQHPRLV 64

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   +I E+M N SL  F+   E  KL   +K   +    A G+ ++    
Sbjct: 65  RLYAV-VTQEPIYIITEYMENGSLVDFLKTPEGIKL-TINKLIDMAAQIAEGMAFIE--- 119

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNTNRVVGTYGYMAPEYA 563
           R   IHRDL+A+N+L+ + +  KI+DFGLAR    +E    EG    +  T    APE  
Sbjct: 120 RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWT----APEAI 175

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF 623
           + G F++KSDV+SFGILL EIV+    R  Y       +I++  + +   MP    D C 
Sbjct: 176 NYGTFTIKSDVWSFGILLTEIVT--YGRIPYPGMTNPEVIQNLERGYR--MPRP--DNCP 229

Query: 624 KDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
           ++ + L           LC ++ PE+RP
Sbjct: 230 EELYELM---------RLCWKEKPEERP 248

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score =  111 bits (280), Expect = 1e-27
 Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 8/197 (4%)

Query: 393 KKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +K+G+G FG VYKG L    E+AVK  R +   +   K L+   IL  +  H N+VKL+G
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEIL-KQYDHPNIVKLIG 59

Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            C+  +   ++ E +P  SL +F+  +++   L   K   +    A G+ YL   +    
Sbjct: 60  VCVQKQPIYIVMELVPGGSLLTFL--RKKKNRLTVKKLLQMSLDAAAGMEYLESKN---C 114

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDL A N L+ ++   KISDFG++R   G     +         + APE  + G+++ 
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTS 174

Query: 571 KSDVFSFGILLLEIVSG 587
           +SDV+S+GILL E  S 
Sbjct: 175 ESDVWSYGILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score =  110 bits (278), Expect = 3e-27
 Identities = 70/201 (34%), Positives = 98/201 (48%), Gaps = 15/201 (7%)

Query: 393 KKLGEGGFGPVYKGTL----ADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVK 447
           K+LG G FG V KG        E E+AVK L +      K E   E  + ++L H  +V+
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L+G C  GE  +L+ E  P   L  ++  +    + D  +  H +   A G+ YL     
Sbjct: 61  LIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQV---AMGMAYLESK-- 114

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYASD 565
              +HRDL A NVLL      KISDFG++RA G            G +   + APE  + 
Sbjct: 115 -HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY-YRATTAGRWPLKWYAPECINY 172

Query: 566 GQFSVKSDVFSFGILLLEIVS 586
           G+FS KSDV+S+G+ L E  S
Sbjct: 173 GKFSSKSDVWSYGVTLWEAFS 193

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score =  110 bits (275), Expect = 7e-27
 Identities = 90/269 (33%), Positives = 125/269 (46%), Gaps = 29/269 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  + KKLG G FG V+ G   +  ++AVK L K     ++    E  L   LQH  LV
Sbjct: 6   ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 64

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M   SL  F+   E  K+L   K        A G+ Y+    
Sbjct: 65  RLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE--- 120

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYAS 564
           R   IHRDL+A+NVL+ + +  KI+DFGLAR    +E    T R    +   + APE  +
Sbjct: 121 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAIN 177

Query: 565 DGQFSVKSDVFSFGILLLEIVSGKK--NRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC 622
            G F++KSDV+SFGILL EIV+  K    G  +SD    L R       E  P +L D  
Sbjct: 178 FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYD-- 235

Query: 623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
                          I   C ++  E+RP
Sbjct: 236 ---------------IMKTCWKEKAEERP 249

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score =  108 bits (272), Expect = 2e-26
 Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 31/270 (11%)

Query: 388 NFSINKKLGEGGFGPVYKGTL-ADEQEIAVKR--LSKISEQGLKELKNEIILFSKLQHRN 444
           +F I  K+G+G FG V+K    AD++  A+K+  LSK++ +  +E  +E  + +KL    
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD---WSKRFHIICGTARGLLY 501
           +++     +   +  ++ E+  N  L   +  Q    L +   W  RF I      GL +
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVW--RFFI--QILLGLAH 116

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           LH     +I+HRD+K+ N+ LD   N KI D G+A+    +    NT  +VGT  Y++PE
Sbjct: 117 LHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT--IVGTPYYLSPE 171

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
              D  ++ KSDV++ G++L E  +GK     + ++N+  LI    +     +       
Sbjct: 172 LCEDKPYNEKSDVWALGVVLYECCTGKHP---FDANNQGALILKIIRGVFPPVSQ----- 223

Query: 622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
               S  LA++I        C+ +    RP
Sbjct: 224 --MYSQQLAQLID------QCLTKDYRQRP 245

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score =  109 bits (274), Expect = 2e-26
 Identities = 75/211 (35%), Positives = 104/211 (49%), Gaps = 18/211 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGT---LADEQ---EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +N S  K LG G FG V + T   L+      ++AVK L   +    +E L +E+ + S 
Sbjct: 35  NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH 94

Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           L  H N+V LLG C  G   L+I E+     L +F+  ++R   L            A+G
Sbjct: 95  LGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFL-RRKRESFLTLEDLLSFSYQVAKG 153

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNTNRVVGTY 555
           + +L   +    IHRDL A NVLL      KI DFGLAR    D     +GN    V   
Sbjct: 154 MAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPV--- 207

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            +MAPE   +  ++ +SDV+S+GILL EI S
Sbjct: 208 KWMAPESIFNCVYTFESDVWSYGILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score =  108 bits (271), Expect = 6e-26
 Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 32/239 (13%)

Query: 370 IDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRL-SKI 422
           + LD P +EL       D  ++ K LGEG FG V K              +AVK L    
Sbjct: 1   LPLD-PEWELPR-----DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA 54

Query: 423 SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK 481
           +E+ L +L +E+ +   + +H+N++ LLG C       ++ E+  + +L  F+  + R  
Sbjct: 55  TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRAR-RPP 113

Query: 482 LLDWSKRFHIICG--------------TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN 527
               S                       ARG+ +L      + IHRDL A NVL+ +D  
Sbjct: 114 GEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTEDHV 170

Query: 528 PKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            KI+DFGLAR     +    T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 171 MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  107 bits (269), Expect = 8e-26
 Identities = 67/200 (33%), Positives = 101/200 (50%), Gaps = 12/200 (6%)

Query: 393 KKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKN--EIILFSKLQHRNLVKLL 449
            K+GEG +G VYK       EI A+K++    E          EI L  +L H N++KLL
Sbjct: 5   GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL 64

Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
               H  +  L++EFM +  L   I  ++R + L  S     +    +GL + H      
Sbjct: 65  DVFRHKGDLYLVFEFM-DTDLYKLI--KDRQRGLPESLIKSYLYQLLQGLAFCHSH---G 118

Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YASDGQF 568
           I+HRDLK  N+L++ +   K++DFGLAR+FG       T+ VV T  Y APE    D  +
Sbjct: 119 ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTHYVV-TRWYRAPELLLGDKGY 176

Query: 569 SVKSDVFSFGILLLEIVSGK 588
           S   D++S G +  E++S +
Sbjct: 177 STPVDIWSVGCIFAELLSRR 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  107 bits (269), Expect = 1e-25
 Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 36/216 (16%)

Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVK--RLSKISEQGLKE--LKNEIILFSKLQHR 443
           +   +KLGEG +G VYK       + +A+K  RL    E+G+    L+ EI L  +L+H 
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALR-EISLLKELKHP 58

Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKL-LDWSKR--FHIICGTARGL 499
           N+VKLL   IH E KL L++E+  +  L  ++ D+    L  +  K   + ++ G    L
Sbjct: 59  NIVKLL-DVIHTERKLYLVFEYC-DMDLKKYL-DKRPGPLSPNLIKSIMYQLLRG----L 111

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            Y H     RI+HRDLK  N+L+++D   K++DFGLARAFG       T+ VV T  Y A
Sbjct: 112 AYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT-YTHEVV-TLWYRA 166

Query: 560 PE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE       Y++    +V  D++S G +  E+++GK
Sbjct: 167 PEILLGSKHYST----AV--DIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain

 Score =  100 bits (250), Expect = 1e-25
 Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%)

Query: 223 REDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFG 282
             DGF++   MKLPD T + V +S+ LKEC ++CL N SC AY  +DIR GGSGC +W G
Sbjct: 3   GGDGFLRLPNMKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADIR-GGSGCLIWTG 61

Query: 283 ELIDM 287
           EL+DM
Sbjct: 62  ELVDM 66

Length = 66

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  106 bits (268), Expect = 1e-25
 Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 37/218 (16%)

Query: 389 FSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKE-----LKNEIILFSKLQH 442
           +    ++GEG +G VYK       + +A+K   KI  +  KE        EI L  KL+H
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALK---KIRMENEKEGFPITAIREIKLLQKLRH 57

Query: 443 RNLVKLLGCCIHGEEK---LLIYEFMPNKSLDSFI------FDQERCKLLDWSKRFHIIC 493
            N+V+L    +  + K    +++E+M +  L   +      F + + K          + 
Sbjct: 58  PNIVRLK-EIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIK--------CYMK 107

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
               GL YLH +    I+HRD+K SN+L++ D   K++DFGLAR +    +   TNRV+ 
Sbjct: 108 QLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI- 163

Query: 554 TYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  Y  PE    A+  ++  + D++S G +L E+  GK
Sbjct: 164 TLWYRPPELLLGAT--RYGPEVDMWSVGCILAELFLGK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score =  106 bits (266), Expect = 2e-25
 Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 22/215 (10%)

Query: 394 KLGEGGFGPVYKG---TLADEQE---IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           +LGEG FG V+      L  EQ+   +AVK L + SE   ++ + E  L + LQH+++V+
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF---------IFDQER---CKLLDWSKRFHIICGT 495
             G C  G   L+++E+M +  L+ F         I           L   +   I    
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           A G++YL   + L  +HRDL   N L+ Q +  KI DFG++R     +      R +   
Sbjct: 132 ASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 188

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKK 589
            +M PE     +F+ +SD++SFG++L EI + GK+
Sbjct: 189 RWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQ 223

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score =  105 bits (264), Expect = 2e-25
 Identities = 88/273 (32%), Positives = 131/273 (47%), Gaps = 38/273 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  + KKLG G FG V+  T     ++AVK + K     ++    E  +   LQH  LV
Sbjct: 6   ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 64

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE-----RCKLLDWSKRFHIICGTARGLLY 501
           KL    +  E   +I EFM   SL  F+   E       KL+D+S +       A G+ +
Sbjct: 65  KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAF 117

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNTNRVVGTYGYM 558
           + Q +    IHRDL+A+N+L+   +  KI+DFGLAR    +E    EG    +  T    
Sbjct: 118 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT---- 170

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE  + G F++KSDV+SFGILL+EIV+    R  Y   +   +IR        G     
Sbjct: 171 APEAINFGSFTIKSDVWSFGILLMEIVT--YGRIPYPGMSNPEVIRAL----ERGYRMPR 224

Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            + C ++ +N         I + C +  PE+RP
Sbjct: 225 PENCPEELYN---------IMMRCWKNRPEERP 248

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score =  105 bits (265), Expect = 2e-25
 Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 24/228 (10%)

Query: 385 ATDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILF 437
             D+ ++ + LG G FG VY+G        A E ++AVK L +  SEQ   +   E ++ 
Sbjct: 4   PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIM 63

Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD----QERCKLLDWSKRFHIIC 493
           SK  H+N+V+L+G       + ++ E M    L SF+ +     ER   L          
Sbjct: 64  SKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR 123

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---DMNPKISDFGLARAFGGDETEGNTNR 550
             A+G  YL ++     IHRD+ A N LL         KI+DFG+AR            R
Sbjct: 124 DVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGR 180

Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-------GKKNR 591
            +    +M PE   DG F+ K+DV+SFG+LL EI S       G+ N+
Sbjct: 181 AMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ 228

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score =  105 bits (263), Expect = 3e-25
 Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 28/218 (12%)

Query: 389 FSINKKLGEGGFGPVYKGTLADE----QEIAVK--RLSKISEQGLKELKNEIILFSKLQH 442
             + K LGEG FG V +G L+ +     ++AVK  +L   +   ++E  +E        H
Sbjct: 1   LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH 60

Query: 443 RNLVKLLGCCIHGEEK------LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI----- 491
            N++KL+G C            ++I  FM +  L SF+      +L    ++  +     
Sbjct: 61  PNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLL---YSRLGGLPEKLPLQTLLK 117

Query: 492 -ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGD-ETEGNT 548
            +   A G+ YL   S    IHRDL A N +L +DM   ++DFGL++  + GD   +G  
Sbjct: 118 FMVDIALGMEYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRI 174

Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            ++     ++A E  +D  ++ KSDV++FG+ + EI +
Sbjct: 175 AKM--PVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 210

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  105 bits (264), Expect = 4e-25
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 29/220 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSK---ISEQGLKELKNEIILF 437
           +  ++ ++LG+G FG VY+G          E  +A+K +++   + E+   E  NE  + 
Sbjct: 6   EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRER--IEFLNEASVM 63

Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLD--WSKRFHI 491
            +    ++V+LLG    G+  L++ E M    L S++     + E    L     ++F  
Sbjct: 64  KEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQ 123

Query: 492 ICG-TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL      + +HRDL A N ++ +D+  KI DFG+ R    D  E +  R
Sbjct: 124 MAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTR----DIYETDYYR 176

Query: 551 VVGT----YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
             G       +MAPE   DG F+ KSDV+SFG++L E+ +
Sbjct: 177 KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score =  105 bits (264), Expect = 4e-25
 Identities = 85/280 (30%), Positives = 134/280 (47%), Gaps = 39/280 (13%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI----SEQGLKELKNEIILFSK 439
           N  D + I  +LG+G FG VYK   A  +E  +   +KI    SE+ L++   EI + S+
Sbjct: 2   NPNDIWEIIGELGDGAFGKVYK---AQHKETGLFAAAKIIQIESEEELEDFMVEIDILSE 58

Query: 440 LQHRNLVKLLGCCIHGEEKLLIY-EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
            +H N+V L     + E KL I  EF    +LDS + + ER   L   +  ++       
Sbjct: 59  CKHPNIVGLYEAYFY-ENKLWILIEFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEA 115

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L +LH     ++IHRDLKA N+LL  D + K++DFG++ A      +   +  +GT  +M
Sbjct: 116 LNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS-AKNKSTLQ-KRDTFIGTPYWM 170

Query: 559 APEYA-----SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           APE        D  +  K+D++S GI L+E+   +      H +  LN +R   K+    
Sbjct: 171 APEVVACETFKDNPYDYKADIWSLGITLIELAQMEPP----HHE--LNPMRVLLKILKSE 224

Query: 614 MPSQLIDACFKDSFN--LAEVIRCIHIGLLCVQQYPEDRP 651
            P+    + +  SFN  L            C+ + P+DRP
Sbjct: 225 PPTLDQPSKWSSSFNDFLKS----------CLVKDPDDRP 254

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score =  103 bits (258), Expect = 1e-24
 Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 38/256 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRN 444
              ++ +++G G FG V+ G   +++++A+K  R   +SE+   E   E  +  KL H  
Sbjct: 4   SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIE---EAQVMMKLSHPK 60

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           LV+L G C       L++EFM +  L  ++  Q             +      G+ YL  
Sbjct: 61  LVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLES 118

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAPE 561
            +   +IHRDL A N L+ ++   K+SDFG+ R    D+   +T    GT     + +PE
Sbjct: 119 SN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST----GTKFPVKWSSPE 171

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGKK---------------NRGFYHSDNKL------ 600
             S  ++S KSDV+SFG+L+ E+ S  K               N GF     +L      
Sbjct: 172 VFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVY 231

Query: 601 NLIRHAWKLWNEGMPS 616
            L++H WK   E  PS
Sbjct: 232 ELMQHCWKERPEDRPS 247

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score =  103 bits (260), Expect = 1e-24
 Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 10/208 (4%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-IAVKR--LSKISEQGLKELKNEIILFSKLQHR 443
           D++ + + +G G    VY        E +A+KR  L K     + EL+ E+   S+  H 
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTS-VDELRKEVQAMSQCNHP 59

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK     + G+E  L+  ++   SL   +        LD +    ++    +GL YLH
Sbjct: 60  NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNRVVGTYGYMAPE 561
            + +   IHRD+KA N+LL +D + KI+DFG++ +   GGD T       VGT  +MAPE
Sbjct: 120 SNGQ---IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPE 176

Query: 562 YASDGQ-FSVKSDVFSFGILLLEIVSGK 588
                  +  K+D++SFGI  +E+ +G 
Sbjct: 177 VMEQVHGYDFKADIWSFGITAIELATGA 204

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score =  104 bits (261), Expect = 1e-24
 Identities = 87/288 (30%), Positives = 135/288 (46%), Gaps = 53/288 (18%)

Query: 393 KKLGEGGFGPVYK---GTLADE--QEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V       L D   + +AVK+L   + + L++ + EI +   LQH N+VK
Sbjct: 10  QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVK 69

Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSL-DSFIFDQERC---KLLDWSKRFHIICGTARGLLY 501
             G C   G   L L+ E++P  SL D     +ER    KLL ++ +   IC   +G+ Y
Sbjct: 70  YKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQ---IC---KGMEY 123

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG---TYGYM 558
           L      R +HRDL   N+L++ +   KI DFGL +    D+ E    R  G    + Y 
Sbjct: 124 L---GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK-EYYKVREPGESPIFWY- 178

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE  ++ +FSV SDV+SFG++L E+        F +SD   +      ++       Q+
Sbjct: 179 APESLTESKFSVASDVWSFGVVLYEL--------FTYSDKSCSPPAEFMRMMGNDKQGQM 230

Query: 619 IDACFKDSFNLAEVIR----------C---IH-IGLLCVQQYPEDRPC 652
           I       ++L E+++          C   I+ I   C    P  RP 
Sbjct: 231 I------VYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPS 272

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score =  103 bits (258), Expect = 2e-24
 Identities = 84/292 (28%), Positives = 129/292 (44%), Gaps = 46/292 (15%)

Query: 388 NFSINKKLGEGGFGPVYKGT------LADEQEIAVKRLSKISEQG-LKELKNEIILFSKL 440
           N  + K LGEG FG V K T       A    +AVK L + +    L++L +E  L  ++
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI---------------------FDQER 479
            H +++KL G C      LLI E+    SL SF+                      D   
Sbjct: 61  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120

Query: 480 CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 539
            + L            +RG+ YL   + ++++HRDL A NVL+ +    KISDFGL+R  
Sbjct: 121 ERALTMGDLISFAWQISRGMQYL---AEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDV 177

Query: 540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
             +++    ++      +MA E   D  ++ +SDV+SFG+LL EIV+   N   Y     
Sbjct: 178 YEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGIAP 235

Query: 600 LNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
             L    + L   G   +  + C ++ +NL          L C +Q P+ RP
Sbjct: 236 ERL----FNLLKTGYRMERPENCSEEMYNLM---------LTCWKQEPDKRP 274

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  102 bits (255), Expect = 4e-24
 Identities = 67/216 (31%), Positives = 95/216 (43%), Gaps = 46/216 (21%)

Query: 393 KKLGEGGFGPVYKGTLADEQEI-AVKRL-----SKISEQGLKELKNEIILFSKLQHRNLV 446
            +LG G  G V K       +I AVK +       I +Q L+EL    IL  K     +V
Sbjct: 7   GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELD---ILH-KCNSPYIV 62

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF------HIICGTARGLL 500
              G   +  +  +  E+M   SLD          L +   R        I     +GL 
Sbjct: 63  GFYGAFYNNGDISICMEYMDGGSLDKI--------LKEVQGRIPERILGKIAVAVLKGLT 114

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG--------LARAFGGDETEGNTNRVV 552
           YLH   + +IIHRD+K SN+L++     K+ DFG        LA+ F            V
Sbjct: 115 YLH--EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF------------V 160

Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           GT  YMAPE      +SVKSD++S G+ L+E+ +G+
Sbjct: 161 GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score =  102 bits (255), Expect = 5e-24
 Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 17/205 (8%)

Query: 395 LGEGGFGPVYKGTL------ADEQEIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLVK 447
           LG G FG V+            E  + VK L K  ++    E + E+ +F KL H+N+V+
Sbjct: 13  LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRFHIICGTARGLLY 501
           LLG C   E   +I E+     L  F+       ++ +   L   ++  +    A G+ +
Sbjct: 73  LLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDH 132

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L   S  R +HRDL A N L+      K+S   L++     E     N ++    ++APE
Sbjct: 133 L---SNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALI-PLRWLAPE 188

Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
              +  FS KSDV+SFG+L+ E+ +
Sbjct: 189 AVQEDDFSTKSDVWSFGVLMWEVFT 213

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  101 bits (255), Expect = 6e-24
 Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 26/265 (9%)

Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHRNLV 446
           F++ + +G+G FG VYK       Q +A+K +  + +E  +++++ EI   S+ +   + 
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           K  G  + G +  +I E+    S      D  +   LD +    I+     GL YLH++ 
Sbjct: 63  KYYGSFLKGSKLWIIMEYCGGGS----CLDLLKPGKLDETYIAFILREVLLGLEYLHEE- 117

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRD+KA+N+LL ++ + K++DFG++       T    N  VGT  +MAPE     
Sbjct: 118 --GKIHRDIKAANILLSEEGDVKLADFGVSGQLT--STMSKRNTFVGTPFWMAPEVIKQS 173

Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            +  K+D++S GI  +E+  G+      H    L LI       N   P  L    F   
Sbjct: 174 GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPK-----NN--PPSLEGNKFSKP 226

Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRP 651
           F   + +        C+ + P++RP
Sbjct: 227 FK--DFVSL------CLNKDPKERP 243

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  101 bits (253), Expect = 6e-24
 Identities = 70/248 (28%), Positives = 110/248 (44%), Gaps = 30/248 (12%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQHR 443
           +F + + +G+G FG V      D +++ A+K ++K   + +  ++ + NE  +  +L H 
Sbjct: 1   HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTARG 498
            LV L       E   L+ + +    L   +     F +E+ K          IC     
Sbjct: 61  FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKF--------WICEIVLA 112

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L YLH      IIHRD+K  N+LLD+  +  I+DF +A     D     T    GT GYM
Sbjct: 113 LEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYM 166

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGF-YHSDNKLNLIRHAWK----LWNEG 613
           APE      +SV  D +S G+   E + GK  R +  HS    + IR   +    L+   
Sbjct: 167 APEVLCRQGYSVAVDWWSLGVTAYECLRGK--RPYRGHSRTIRDQIRAKQETADVLYPAT 224

Query: 614 MPSQLIDA 621
             ++ IDA
Sbjct: 225 WSTEAIDA 232

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score =  101 bits (252), Expect = 7e-24
 Identities = 87/270 (32%), Positives = 134/270 (49%), Gaps = 28/270 (10%)

Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN 444
             ++  + KKLG G FG V+ GT     ++AVK L K      +    E  +  KL+H  
Sbjct: 4   PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDK 62

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           LV+L    +  E   ++ E+M   SL  F+ D E  + L       +    A G+ Y+  
Sbjct: 63  LVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIE- 119

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEY 562
             R+  IHRDL+++N+L+   +  KI+DFGLAR    +E    T R    +   + APE 
Sbjct: 120 --RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY---TARQGAKFPIKWTAPEA 174

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC 622
           A  G+F++KSDV+SFGILL E+V+  K R  Y   N   ++    + +   MP      C
Sbjct: 175 ALYGRFTIKSDVWSFGILLTELVT--KGRVPYPGMNNREVLEQVERGYR--MP------C 224

Query: 623 FKDS-FNLAEVIRCIHIGLLCVQQYPEDRP 651
            +D   +L E++      L C ++ PE+RP
Sbjct: 225 PQDCPISLHELM------LQCWKKDPEERP 248

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score =  101 bits (254), Expect = 8e-24
 Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 28/223 (12%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QH 442
           + T  F + + +GEG +G VYK       ++   ++  I E   +E+K E  +  K   H
Sbjct: 3   DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH 62

Query: 443 RNLVKLLGC------CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF------H 490
            N+    G         + ++  L+ E     S    + D  +  L    KR       +
Sbjct: 63  PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGS----VTDLVK-GLRKKGKRLKEEWIAY 117

Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           I+  T RGL YLH++   ++IHRD+K  N+LL ++   K+ DFG++     D T G  N 
Sbjct: 118 ILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQL--DSTLGRRNT 172

Query: 551 VVGTYGYMAPE-----YASDGQFSVKSDVFSFGILLLEIVSGK 588
            +GT  +MAPE        D  +  +SDV+S GI  +E+  GK
Sbjct: 173 FIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGK 215

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score =  101 bits (252), Expect = 8e-24
 Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 7/198 (3%)

Query: 390 SINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           ++  KLG G +G VY+G        +AVK L K     ++E   E  +  +++H NLV+L
Sbjct: 9   TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQL 67

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
           LG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +  
Sbjct: 68  LGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN-- 124

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF 568
             IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  +F
Sbjct: 125 -FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKF 182

Query: 569 SVKSDVFSFGILLLEIVS 586
           S+KSDV++FG+LL EI +
Sbjct: 183 SIKSDVWAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score =  101 bits (253), Expect = 9e-24
 Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 27/233 (11%)

Query: 388 NFSINKKLGEGGFGPVYKG---TLADEQE---IAVKRLSKISEQGLKELKNEIILFSKLQ 441
           N  + ++LGEG FG V+      L  EQ+   +AVK L   S+   K+   E  L + LQ
Sbjct: 6   NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 65

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI----------FDQERCKLLDWSKRFHI 491
           H ++VK  G C+ G+  ++++E+M +  L+ F+           +  R   L  S+  HI
Sbjct: 66  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHI 125

Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G++YL   +    +HRDL   N L+ +++  KI DFG++R    D    +  RV
Sbjct: 126 AQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYRV 178

Query: 552 VG----TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
            G       +M PE     +F+ +SDV+S G++L EI +  K   +  S+N++
Sbjct: 179 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 231

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score =  100 bits (251), Expect = 9e-24
 Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 15/199 (7%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHRNLVK 447
            ++ + +GEG FG V +G     Q++AVK +   ++ Q   E   E  + +KL H+NLV+
Sbjct: 8   LTLGEIIGEGEFGAVLQGEYTG-QKVAVKNIKCDVTAQAFLE---ETAVMTKLHHKNLVR 63

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           LLG  +H     ++ E M   +L +F+  + R  L+   +        A G+ YL     
Sbjct: 64  LLGVILH-NGLYIVMELMSKGNLVNFLRTRGRA-LVSVIQLLQFSLDVAEGMEYLESK-- 119

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
            +++HRDL A N+L+ +D   K+SDFGLAR      + G  N  +    + APE     +
Sbjct: 120 -KLVHRDLAARNILVSEDGVAKVSDFGLARV----GSMGVDNSKLPV-KWTAPEALKHKK 173

Query: 568 FSVKSDVFSFGILLLEIVS 586
           FS KSDV+S+G+LL E+ S
Sbjct: 174 FSSKSDVWSYGVLLWEVFS 192

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  100 bits (251), Expect = 1e-23
 Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 28/207 (13%)

Query: 395 LGEGGFGPVYKGTLADEQE-IAVKRLS-----KISEQGLKELKNEIILFSKLQHRNLVKL 448
           LG G FG VY+G   D+ +  AVK +S     +  ++ +K+L+ EI L SKLQH N+V+ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 449 LGCCIHGEEKLLIY-EFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTARGLLYL 502
           LG     E+ L I+ E +P  SL   +     F +   +L  ++++         GL YL
Sbjct: 68  LGT-EREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRL--YTRQI------LLGLEYL 118

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H       +HRD+K +N+L+D +   K++DFG+A+               G+  +MAPE 
Sbjct: 119 HDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQV---VEFSFAKSFKGSPYWMAPEV 172

Query: 563 -ASDGQFSVKSDVFSFGILLLEIVSGK 588
            A  G + + +D++S G  +LE+ +GK
Sbjct: 173 IAQQGGYGLAADIWSLGCTVLEMATGK 199

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score =  100 bits (251), Expect = 1e-23
 Identities = 65/205 (31%), Positives = 87/205 (42%), Gaps = 21/205 (10%)

Query: 393 KKLGEGGFGPVYKGT----LADEQEIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLVK 447
           KKLG+G FG V +G           +AVK L        + +   E  +   L H NL++
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG----TARGLLYLH 503
           L G  +     + + E  P  SL     D+ R   L        +C      A G+ YL 
Sbjct: 61  LYGVVLTHPLMM-VTELAPLGSL----LDRLRKDALG-HFLISTLCDYAVQIANGMRYLE 114

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNRVVGTYGYMAPE 561
                R IHRDL A N+LL  D   KI DFGL RA     D      +  V  + + APE
Sbjct: 115 SK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV-PFAWCAPE 170

Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
                 FS  SDV+ FG+ L E+ +
Sbjct: 171 SLRTRTFSHASDVWMFGVTLWEMFT 195

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  101 bits (253), Expect = 1e-23
 Identities = 63/215 (29%), Positives = 121/215 (56%), Gaps = 12/215 (5%)

Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELK-NE 433
           L  + ++ +    ++  +K+G+G  G VY    +A  QE+A+K+++ + +Q  KEL  NE
Sbjct: 8   LRTIVSVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMN-LQQQPKKELIINE 66

Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
           I++  + +H N+V  L   + G+E  ++ E++   SL   +   E C  +D  +   +  
Sbjct: 67  ILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 122

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              + L +LH +   ++IHRD+K+ N+LL  D + K++DFG       ++++ +T  +VG
Sbjct: 123 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVG 177

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  +MAPE  +   +  K D++S GI+ +E+V G+
Sbjct: 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score =  100 bits (251), Expect = 1e-23
 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 20/209 (9%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN----EIILFSKL 440
             NF I KK+G+G F  VYK   L D + +A+K++ +I E    + +     EI L  +L
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKV-QIFEMMDAKARQDCLKEIDLLKQL 59

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-FDQERCKLLD----WSKRFHIICGT 495
            H N++K L   I   E  ++ E      L   I   +++ +L+     W K F  +C  
Sbjct: 60  DHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIW-KYFVQLC-- 116

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L ++H     RI+HRD+K +NV +      K+ D GL R F    T  ++  +VGT 
Sbjct: 117 -SALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTP 170

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEI 584
            YM+PE   +  ++ KSD++S G LL E+
Sbjct: 171 YYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 99.8 bits (249), Expect = 2e-23
 Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 11/205 (5%)

Query: 388 NFSINKKLGEGGFGPVYK-GTLADEQEIAVKR--LSKISEQGLKELKNEIILFSKLQHRN 444
           +F + KKLG+G +G VYK   L+D Q  A+K   L  +S++  ++  NEI + + + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERC-KLLDWSKRFHIICGTARGLLYLH 503
           ++      + G +  ++ E+ P   L   I  +++  KL+   + + I     RGL  LH
Sbjct: 61  IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
           +    +I+HRDLK++N+LL  +   KI D G+++       +      +GT  YMAPE  
Sbjct: 121 E---QKILHRDLKSANILLVANDLVKIGDLGISKVL----KKNMAKTQIGTPHYMAPEVW 173

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGK 588
               +S KSD++S G LL E+ +  
Sbjct: 174 KGRPYSYKSDIWSLGCLLYEMATFA 198

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score =  100 bits (250), Expect = 2e-23
 Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 45/221 (20%)

Query: 395 LGEGGFGPVYKGTLADEQE-IAVKRL---SKISEQG-------LKELKNEIILFSKLQHR 443
           +G+G +G VY        E +AVK++   + I+ +        +K L++EI     L H 
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 444 NLVKLLGCCIHGEEKLLIY----EFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICG 494
           N+V+ LG     E          E++P  S+ S +     F+++  +             
Sbjct: 69  NIVQYLGF----ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVR--------FFTEQ 116

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR----AFGGDETEGNTNR 550
              GL YLH      I+HRDLKA N+L+D D   KISDFG+++     +  D+       
Sbjct: 117 VLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQ----NMS 169

Query: 551 VVGTYGYMAPEY-ASDGQ-FSVKSDVFSFGILLLEIVSGKK 589
           + G+  +MAPE   S  Q +S K D++S G ++LE+ +G++
Sbjct: 170 MQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score =   99 bits (249), Expect = 3e-23
 Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 32/214 (14%)

Query: 395 LGEGGFGPVYKGTLADEQEI-AVKR--LSKISEQG-------LKELKNEIILFSKLQHRN 444
           +G G FG VY G  A   E+ AVK+  L  +S          L  L  EI L  +LQH N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF------HIICGTARG 498
           +V+ LG  +  +   +  E++P  S+ +         LL+    F      + +    +G
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAA---------LLNNYGAFEETLVRNFVRQILKG 118

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG--NTNR--VVGT 554
           L YLH      IIHRD+K +N+L+D     KISDFG+++    +      N  R  + G+
Sbjct: 119 LNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGS 175

Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             +MAPE      ++ K+D++S G L++E+++GK
Sbjct: 176 VFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 99.1 bits (247), Expect = 3e-23
 Identities = 67/202 (33%), Positives = 99/202 (49%), Gaps = 17/202 (8%)

Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           K+LG G FG V+ G    + ++A+K + +  +SE    E   E  +  KL H NLV+L G
Sbjct: 10  KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIE---EAKVMMKLSHPNLVQLYG 66

Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            C       ++ E+M N  L +++  +ER   L       +       + YL  +     
Sbjct: 67  VCTKQRPIFIVTEYMANGCLLNYL--RERKGKLGTEWLLDMCSDVCEAMEYLESNG---F 121

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAPEYASDGQ 567
           IHRDL A N L+ +D   K+SDFGLAR    D+   +     GT     +  PE     +
Sbjct: 122 IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ----GTKFPVKWAPPEVFDYSR 177

Query: 568 FSVKSDVFSFGILLLEIVSGKK 589
           FS KSDV+SFG+L+ E+ S  K
Sbjct: 178 FSSKSDVWSFGVLMWEVFSEGK 199

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score =  100 bits (249), Expect = 3e-23
 Identities = 67/204 (32%), Positives = 112/204 (54%), Gaps = 20/204 (9%)

Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLV 446
           K LG G FG VYKG    E E     +A+K L++ +  +   E  +E ++ + + H +LV
Sbjct: 13  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 72

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTARGLLYL 502
           +LLG C+    +L + + MP+  L  ++ + +       LL+W  +       A+G++YL
Sbjct: 73  RLLGVCLSPTIQL-VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 125

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +    R++HRDL A NVL+    + KI+DFGLAR   GDE E N +       +MA E 
Sbjct: 126 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 182

Query: 563 ASDGQFSVKSDVFSFGILLLEIVS 586
               +F+ +SDV+S+G+ + E+++
Sbjct: 183 IHYRKFTHQSDVWSYGVTIWELMT 206

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 99.1 bits (247), Expect = 4e-23
 Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 23/205 (11%)

Query: 395 LGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCI 453
           LG+G +G VY       Q  IA+K + +   + ++ L  EI L S L+HRN+V+ LG   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 454 HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDW----SKRFHIICGTAR---GLLYLHQDS 506
                 +  E +P  SL + +    R K   W         II  T +   GL YLH   
Sbjct: 76  ENGFFKIFMEQVPGGSLSALL----RSK---WGPLKDNEQTIIFYTKQILEGLKYLHD-- 126

Query: 507 RLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
             +I+HRD+K  NVL++      KISDFG ++   G      T    GT  YMAPE    
Sbjct: 127 -NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG--INPCTETFTGTLQYMAPEVIDK 183

Query: 566 GQ--FSVKSDVFSFGILLLEIVSGK 588
           G   +   +D++S G  ++E+ +GK
Sbjct: 184 GPRGYGAPADIWSLGCTIVEMATGK 208

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 99.2 bits (247), Expect = 5e-23
 Identities = 76/209 (36%), Positives = 102/209 (48%), Gaps = 28/209 (13%)

Query: 393 KKLGEGGFGPV----YKGTLADEQE-IAVKRLSKISEQGLKE-LKNEIILFSKLQHRNLV 446
           + LGEG FG V    Y        E +AVK L +   Q      K EI +   L H N+V
Sbjct: 10  RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIV 69

Query: 447 KLLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQE--RCKLLDWSKRFHIICGTARGLLYL 502
           K  GCC     K   LI E++P  SL  ++   +    +LL ++++   IC    G+ YL
Sbjct: 70  KYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQ---IC---EGMAYL 123

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----Y 557
           H       IHRDL A NVLLD D   KI DFGLA+A      EG+    V   G     +
Sbjct: 124 HSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPVFW 176

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            A E   + +FS  SDV+SFG+ L E+++
Sbjct: 177 YAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 98.9 bits (247), Expect = 6e-23
 Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 18/208 (8%)

Query: 393 KKLGEGGFGPVYKGT-LADEQEIAVKRLS--KISEQGLKELKNEIILFSKLQHRNLVKLL 449
           + +G+G FG V K    +D + +  K +    ++E+  ++L +E+ +  +L+H N+V+  
Sbjct: 6   ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65

Query: 450 GCCIHGEEKLLIY---EFMPNKSLDSFIFDQERCK----LLDWSKRFHIICGTARGLLYL 502
              I       +Y   E+     L   I   ++CK     ++    + I+      L   
Sbjct: 66  DR-IIDRSNQTLYIVMEYCEGGDLAQLI---QKCKKERKYIEEEFIWRILTQLLLALYEC 121

Query: 503 H--QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           H   D    ++HRDLK +N+ LD + N K+ DFGLA+  G D +   T   VGT  YM+P
Sbjct: 122 HNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKT--YVGTPYYMSP 179

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSGK 588
           E  +   +  KSD++S G L+ E+ +  
Sbjct: 180 EQLNHMSYDEKSDIWSLGCLIYELCALS 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 98.9 bits (246), Expect = 6e-23
 Identities = 72/235 (30%), Positives = 120/235 (51%), Gaps = 26/235 (11%)

Query: 393 KKLGEGGFGPVYKGTL------ADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHRNL 445
           ++LGE  FG VYKG L         Q +A+K L   +E  L+E  K+E ++ S+LQH N+
Sbjct: 11  EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNI 70

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIF-------------DQERCKLLDWSKRFHII 492
           V LLG     +   +I+ +  +  L  F+              D+     L+ +   HI+
Sbjct: 71  VCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV 130

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTNRV 551
              A G+ +L   S   ++H+DL   NVL+   +N KISD GL R  +  D  +   N +
Sbjct: 131 TQIAAGMEFL---SSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSL 187

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRH 605
           +    +M+PE    G+FS+ SD++S+G++L E+ S G +    Y + + + +IR+
Sbjct: 188 LPIR-WMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN 241

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 98.2 bits (245), Expect = 8e-23
 Identities = 75/277 (27%), Positives = 120/277 (43%), Gaps = 47/277 (16%)

Query: 393 KKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLL 449
            K+G G FG VY     D  E+ AVK  R+     + +KE+ +E+ +   L+H NLVK  
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFI----FDQERC------KLLDWSKRFHIICGTARGL 499
           G  +H E+  +  E+    +L+  +       E        +LL              GL
Sbjct: 66  GVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLL-------------EGL 112

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE--GNTNRVVGTYGY 557
            YLH      I+HRD+K +N+ LD +   K+ DFG A     + T        + GT  Y
Sbjct: 113 AYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAY 169

Query: 558 MAPEYASDGQFSVK---SDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM 614
           MAPE  + G+       +D++S G ++LE+ +GK  R +   DN+  ++ H       G 
Sbjct: 170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGK--RPWSELDNEFQIMFHV----GAGH 223

Query: 615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
              + D+         E    +     C++  P+ RP
Sbjct: 224 KPPIPDSLQLSP----EGKDFLD---RCLESDPKKRP 253

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 98.0 bits (244), Expect = 1e-22
 Identities = 76/275 (27%), Positives = 131/275 (47%), Gaps = 40/275 (14%)

Query: 393 KKLGEGGFGPVYK------GTLADEQEIAVKRLSKISEQG--LKELKNEIILFSKLQHRN 444
           ++LG G F   Y+      GTL   +++   R +  SEQ   ++ L+ EI L ++L H +
Sbjct: 6   QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTS-SEQEEVVEALRKEIRLMARLNHPH 64

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           ++++LG         L  E+M   S+   +      K          +    RGL YLH+
Sbjct: 65  IIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLL---RGLSYLHE 121

Query: 505 DSRLRIIHRDLKASNVLLD---QDMNPKISDFGLA-----RAFGGDETEGNTNRVVGTYG 556
           +   +IIHRD+K +N+L+D   Q +  +I+DFG A     +  G  E +G   +++GT  
Sbjct: 122 N---QIIHRDVKGANLLIDSTGQRL--RIADFGAAARLAAKGTGAGEFQG---QLLGTIA 173

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           +MAPE     Q+    DV+S G +++E+ + K         N L LI   +K+ +     
Sbjct: 174 FMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI---FKIASATTAP 230

Query: 617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            + +       +L+  +R   + L C++  PEDRP
Sbjct: 231 SIPE-------HLSPGLR--DVTLRCLELQPEDRP 256

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 98.6 bits (245), Expect = 1e-22
 Identities = 75/269 (27%), Positives = 143/269 (53%), Gaps = 27/269 (10%)

Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELK-NE 433
           L  + +I +    ++  +K+G+G  G V+    +A  QE+A+K+++ + +Q  KEL  NE
Sbjct: 8   LRTIVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQIN-LQKQPKKELIINE 66

Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
           I++  +L++ N+V  L   + G+E  ++ E++   SL   +   E C  +D ++   +  
Sbjct: 67  ILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVV--TETC--MDEAQIAAVCR 122

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              + L +LH +   ++IHRD+K+ NVLL  D + K++DFG       ++++ +T  +VG
Sbjct: 123 ECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST--MVG 177

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           T  +MAPE  +   +  K D++S GI+ +E+V G+     Y ++N L   R  + +   G
Sbjct: 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP---YLNENPL---RALYLIATNG 231

Query: 614 MPS----QLIDACFKDSFNLAEVIRCIHI 638
            P     + +   F+D  N     RC+ +
Sbjct: 232 TPELQNPEKLSPIFRDFLN-----RCLEM 255

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 98.0 bits (244), Expect = 2e-22
 Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 33/228 (14%)

Query: 387 DNFSINKKLGEGGFGPVYK----GTLADEQE--IAVKRLSK-ISEQGLKELKNEIILFSK 439
           +N    + +G+G FG V++    G L  E    +AVK L +  S     + + E  L ++
Sbjct: 5   NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 64

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI--------------------FDQER 479
             H N+VKLLG C  G+   L++E+M    L+ F+                         
Sbjct: 65  FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNP 124

Query: 480 CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-A 538
             L   +++  I    A G+ YL   S  + +HRDL   N L+ ++M  KI+DFGL+R  
Sbjct: 125 LPL-SCTEQLCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 180

Query: 539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +  D  + + N  +    +M PE     +++ +SDV+++G++L EI S
Sbjct: 181 YSADYYKASENDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 97.5 bits (243), Expect = 2e-22
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 395 LGEGGFGPVYKGTLAD----EQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNLVKLL 449
           +G+G FG VY GTL D    +   AVK L++I++ + +++   E I+     H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 450 GCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
           G C+  E   L++  +M +  L +FI  +     +     F +    A+G+ YL      
Sbjct: 63  GICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGL--QVAKGMEYLASK--- 117

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYASDG 566
           + +HRDL A N +LD+    K++DFGLAR     E     N         +MA E     
Sbjct: 118 KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQ 177

Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F+ KSDV+SFG+LL E+++
Sbjct: 178 KFTTKSDVWSFGVLLWELMT 197

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 97.4 bits (242), Expect = 2e-22
 Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 11/202 (5%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 6   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 64

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 65  QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 119

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYAS 564
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E    T R    +   + APE A 
Sbjct: 120 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAAL 176

Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
            G+F++KSDV+SFGILL E+ +
Sbjct: 177 YGRFTIKSDVWSFGILLTELTT 198

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 97.1 bits (242), Expect = 2e-22
 Identities = 72/270 (26%), Positives = 131/270 (48%), Gaps = 27/270 (10%)

Query: 395 LGEGGFGP--VYKGTLADEQEIAVKR--LSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+G FG   +Y+ T  D+  +  K   L+++SE+  ++  NEI++ S LQH N++    
Sbjct: 8   LGKGAFGEATLYRRT-EDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYN 66

Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
             +     L+  E+    +L   I  Q+  +L +       +      + Y+H+     I
Sbjct: 67  HFMDDNTLLIEMEYANGGTLYDKIVRQKG-QLFEEEMVLWYLFQIVSAVSYIHKAG---I 122

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           +HRD+K  N+ L +    K+ DFG+++  G + +   T  VVGT  YM+PE     +++ 
Sbjct: 123 LHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET--VVGTPYYMSPELCQGVKYNF 180

Query: 571 KSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLA 630
           KSD+++ G +L E+++ K+    + + N LNL+    K+       Q         ++ +
Sbjct: 181 KSDIWALGCVLYELLTLKRT---FDATNPLNLV---VKI------VQGNYTPVVSVYS-S 227

Query: 631 EVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
           E+I  +H     +QQ PE RP    V+   
Sbjct: 228 ELISLVH---SLLQQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 97.4 bits (243), Expect = 2e-22
 Identities = 71/206 (34%), Positives = 104/206 (50%), Gaps = 25/206 (12%)

Query: 394 KLGEGGFGPVYKG-TLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           K+GEG +G VYK       + +A+K  RL    E        EI L  +L H N+V+LL 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLD 65

Query: 451 CCIHGEEKL-LIYEFMP---NKSLDS---FIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
             +H E KL L++EF+     K +DS      D    K        + +    +G+ Y H
Sbjct: 66  V-VHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIK-----SYLYQLL---QGIAYCH 116

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
                R++HRDLK  N+L+D++   K++DFGLARAF G      T+ VV T  Y APE  
Sbjct: 117 SH---RVLHRDLKPQNLLIDREGALKLADFGLARAF-GVPVRTYTHEVV-TLWYRAPEIL 171

Query: 564 SDG-QFSVKSDVFSFGILLLEIVSGK 588
               Q+S   D++S G +  E+V+ +
Sbjct: 172 LGSRQYSTPVDIWSIGCIFAEMVNRR 197

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 97.1 bits (242), Expect = 3e-22
 Identities = 77/235 (32%), Positives = 123/235 (52%), Gaps = 23/235 (9%)

Query: 393 KKLGEGGFGPVYKG-TLADEQEIAVKRLSKISE-QGLKELK-NEIILFSKLQHRNLVKLL 449
           +K+GEG +G VYKG      Q +A+K++   SE +G+      EI L  +LQH N+V L 
Sbjct: 6   EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQ 65

Query: 450 GCCIHGEEKL-LIYEFMP---NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
              +  E +L LI+EF+     K LDS    Q     L  S  + I+    +G+L+ H  
Sbjct: 66  DV-LMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQIL----QGILFCH-- 118

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
              R++HRDLK  N+L+D     K++DFGLARAF G      T+ VV T  Y APE    
Sbjct: 119 -SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAF-GIPVRVYTHEVV-TLWYRAPEVLLG 175

Query: 566 GQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
              +S   D++S G +  E+ +    +  +H D++++ +   +++   G P++ +
Sbjct: 176 SPRYSTPVDIWSIGTIFAEMAT---KKPLFHGDSEIDQLFRIFRIL--GTPTEDV 225

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 96.4 bits (240), Expect = 4e-22
 Identities = 67/212 (31%), Positives = 109/212 (51%), Gaps = 21/212 (9%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADE-QEIAVKR-----LSKISEQGLKELKNEIILFSKLQ 441
           N+   K LG+G FG VY     D  +E+AVK+      S  +++ +  L+ EI L   LQ
Sbjct: 3   NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ 62

Query: 442 HRNLVKLLGCCIHGEEKLLIY-EFMPNKSLDSFIFDQERCKLLDWSKR---FHIICGTAR 497
           H  +V+  G C+  +E L I+ E+MP  S+   +  +    L +   R     I+     
Sbjct: 63  HERIVQYYG-CLRDDETLSIFMEYMPGGSVKDQL--KAYGALTETVTRKYTRQIL----E 115

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR-VVGTYG 556
           G+ YLH +    I+HRD+K +N+L D   N K+ DFG ++      + G   + V GT  
Sbjct: 116 GVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPY 172

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           +M+PE  S   +  K+DV+S G  ++E+++ K
Sbjct: 173 WMSPEVISGEGYGRKADVWSVGCTVVEMLTEK 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 96.2 bits (239), Expect = 5e-22
 Identities = 77/281 (27%), Positives = 133/281 (47%), Gaps = 40/281 (14%)

Query: 393 KKLGEGGFGPVYKGTLA----DEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G FG V++G L      E  +A+K L    +E+  ++  +E  +  +  H N+++
Sbjct: 11  KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIR 70

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWS--KRFHIICGTARGLLYLHQD 505
           L G     +  ++I E+M N +LD ++ D +     ++S  +   ++ G A G+ YL   
Sbjct: 71  LEGVVTKFKPAMIITEYMENGALDKYLRDHDG----EFSSYQLVGMLRGIAAGMKYL--- 123

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG--YMAPEYA 563
           S +  +HRDL A N+L++ ++  K+SDFGL+R    D+ EG      G     + APE  
Sbjct: 124 SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVL-EDDPEGTYTTSGGKIPIRWTAPEAI 182

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF 623
           +  +F+  SDV+SFGI++ E++S  +              R  W + N       +    
Sbjct: 183 AYRKFTSASDVWSFGIVMWEVMSFGE--------------RPYWDMSN-----HEVMKAI 223

Query: 624 KDSFNLAEVIRC----IHIGLLCVQQYPEDRPCMPSVILML 660
            D F L   + C      + L C QQ    RP    ++ +L
Sbjct: 224 NDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLL 264

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 95.5 bits (237), Expect = 6e-22
 Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 9/194 (4%)

Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVKLLGCCI 453
           LG+G FG V+KGTL D+  +AVK   +   Q LK +  +E  +  +  H N+VKL+G C 
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62

Query: 454 HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHR 513
             +   ++ E +P     SF+  +++   L   +        A G+ YL   +    IHR
Sbjct: 63  QRQPIYIVMELVPGGDFLSFL--RKKKDELKTKQLVKFALDAAAGMAYLESKN---CIHR 117

Query: 514 DLKASNVLLDQDMNPKISDFGLARAF-GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKS 572
           DL A N L+ ++   KISDFG++R    G  +     ++     + APE  + G++S +S
Sbjct: 118 DLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI--PIKWTAPEALNYGRYSSES 175

Query: 573 DVFSFGILLLEIVS 586
           DV+S+GILL E  S
Sbjct: 176 DVWSYGILLWETFS 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 90.2 bits (224), Expect = 6e-22
 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 213 CVRDKSLNYSREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRG 272
           C  D S      DGF+K   +KLPD   +    +++L+ECRE CL N SC AY  ++   
Sbjct: 5   CGGDGS-----TDGFLKLPDVKLPDN--ASAITAISLEECREACLSNCSCTAYAYNN--- 54

Query: 273 GGSGCAMWFGELIDMRDFPDGGQDLYIR 300
           G  GC +W G L ++R    GG  LY+R
Sbjct: 55  GSGGCLLWNGLLNNLRSLSSGGGTLYLR 82

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 96.3 bits (239), Expect = 7e-22
 Identities = 74/269 (27%), Positives = 142/269 (52%), Gaps = 27/269 (10%)

Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKELK-NE 433
           L  + ++ +    ++  +K+G+G  G VY    +A  QE+A+K+++ + +Q  KEL  NE
Sbjct: 8   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMN-LQQQPKKELIINE 66

Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
           I++  + ++ N+V  L   + G+E  ++ E++   SL   +   E C  +D  +   +  
Sbjct: 67  ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 122

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              + L +LH +   ++IHRD+K+ N+LL  D + K++DFG       ++++ +T  +VG
Sbjct: 123 ECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVG 177

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           T  +MAPE  +   +  K D++S GI+ +E+V G+     Y ++N L   R  + +   G
Sbjct: 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP---YLNENPL---RALYLIATNG 231

Query: 614 MPS----QLIDACFKDSFNLAEVIRCIHI 638
            P     + + A F+D  N     RC+ +
Sbjct: 232 TPELQNPERLSAVFRDFLN-----RCLEM 255

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 95.1 bits (236), Expect = 9e-22
 Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 11/202 (5%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  ++ KLG+G FG V+ GT     ++A+K L K      +    E  +  KL+H  LV
Sbjct: 6   ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRHDKLV 64

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
            L    +  E   ++ EFM   SL  F+ + +  K L   +   +    A G+ Y+    
Sbjct: 65  PLYAV-VSEEPIYIVTEFMGKGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIE--- 119

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYAS 564
           R+  IHRDL+A+N+L+  ++  KI+DFGLAR    +E    T R    +   + APE A 
Sbjct: 120 RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY---TARQGAKFPIKWTAPEAAL 176

Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
            G+F++KSDV+SFGILL E+V+
Sbjct: 177 YGRFTIKSDVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 95.4 bits (238), Expect = 1e-21
 Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 12/178 (6%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKR--LSKISEQGLKELKNEIILFSKLQHRN 444
            + I  ++GEG  G V+K       + +A+K+  L ++      +   EI      QH  
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF-HIICGTARGLLYLH 503
           +VKLL    HG   +L+ E+MP+  L   + D+ER       K +  ++    +G+ Y+H
Sbjct: 61  VVKLLDVFPHGSGFVLVMEYMPS-DLSEVLRDEERPLPEAQVKSYMRMLL---KGVAYMH 116

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
                 I+HRDLK +N+L+  D   KI+DFGLAR F  +E    +++ V T  Y APE
Sbjct: 117 A---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ-VATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 95.3 bits (237), Expect = 1e-21
 Identities = 65/202 (32%), Positives = 93/202 (46%), Gaps = 19/202 (9%)

Query: 395 LGEGGFGPVYKGTLADEQEI-AVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGFG V    +    ++ A K+L K      +G +   NE  +  K+  R +V L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSL-A 59

Query: 451 CCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFH---IICGTARGLLYLHQDS 506
                ++ L L+   M    L   I++       +    F+   IICG    L +LHQ  
Sbjct: 60  YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICG----LEHLHQ-- 113

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
             RI++RDLK  NVLLD   N +ISD GLA    G +         GT GYMAPE     
Sbjct: 114 -RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK---IKGRAGTPGYMAPEVLQGE 169

Query: 567 QFSVKSDVFSFGILLLEIVSGK 588
            +    D F+ G  L E+++G+
Sbjct: 170 VYDFSVDWFALGCTLYEMIAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 95.1 bits (236), Expect = 2e-21
 Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 25/213 (11%)

Query: 384 NATDNFSINKKLGEGGFGPVYK------GTLADEQEIAVKRLSKISEQGLKELKNEIILF 437
           +  + + I  +LG+G FG VYK      G LA  + I  K     SE+ L++   EI + 
Sbjct: 9   DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK-----SEEELEDYMVEIEIL 63

Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA- 496
           +   H  +VKLLG      +  ++ EF P  ++D+ + + +R        +  +IC    
Sbjct: 64  ATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVICRQML 120

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
             L YLH    ++IIHRDLKA NVLL  D + K++DFG++      +T    +  +GT  
Sbjct: 121 EALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAK--NVKTLQRRDSFIGTPY 175

Query: 557 YMAPEYA-----SDGQFSVKSDVFSFGILLLEI 584
           +MAPE        D  +  K+D++S GI L+E+
Sbjct: 176 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 94.9 bits (237), Expect = 2e-21
 Identities = 70/211 (33%), Positives = 104/211 (49%), Gaps = 31/211 (14%)

Query: 393 KKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN-----EIILFSKLQHRNLV 446
           KKLGEG +  VYK       + +A+K++     +  K+  N     EI L  +L+H N++
Sbjct: 6   KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNII 65

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLL-DWSKRF---HIIC---GTARGL 499
            LL    H     L++EFM          D E  K++ D S       I      T RGL
Sbjct: 66  GLLDVFGHKSNINLVFEFMET--------DLE--KVIKDKSIVLTPADIKSYMLMTLRGL 115

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH      I+HRDLK +N+L+  D   K++DFGLAR+FG    +  T++VV T  Y A
Sbjct: 116 EYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK-MTHQVV-TRWYRA 170

Query: 560 PE--YASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE  + +   + V  D++S G +  E++   
Sbjct: 171 PELLFGAR-HYGVGVDMWSVGCIFAELLLRV 200

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 94.2 bits (234), Expect = 3e-21
 Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 25/210 (11%)

Query: 391 INKKLGEGGFGPVYKGTLA----DEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHRNL 445
           I + +G G FG V +G L      E  +A+K L S  +E+  ++  +E  +  +  H N+
Sbjct: 8   IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNI 67

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC------GTARGL 499
           + L G        ++I EFM N +LDSF+   +         +F +I       G A G+
Sbjct: 68  IHLEGVVTKSRPVMIITEFMENGALDSFLRQND--------GQFTVIQLVGMLRGIAAGM 119

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG---TYG 556
            YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D ++      +G      
Sbjct: 120 KYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIR 176

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           + APE  +  +F+  SDV+S+GI++ E++S
Sbjct: 177 WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 206

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 94.3 bits (234), Expect = 3e-21
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 30/226 (13%)

Query: 391 INKKLGEGGFGPVYKGT------LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN 444
           + ++LGEG FG V+           D+  +AVK L   +    K+ + E  L + LQH +
Sbjct: 9   LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSF----------IFDQERCKL---LDWSKRFHI 491
           +VK  G C  G+  ++++E+M +  L+ F          + D +  +    L  S+  HI
Sbjct: 69  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 128

Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G++YL   +    +HRDL   N L+  ++  KI DFG++R    D    +  RV
Sbjct: 129 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRV 181

Query: 552 VG----TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGF 593
            G       +M PE     +F+ +SDV+SFG++L EI +  K   F
Sbjct: 182 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 227

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 93.7 bits (233), Expect = 4e-21
 Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 23/211 (10%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELK-NEIILFSKLQHRNL 445
           NF   +KLGEG +  VYKG      EI A+K +   +E+G       EI L  +L+H N+
Sbjct: 1   NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60

Query: 446 VKLLGCCIHGEEKL-LIYEFMPN---KSLDSFIFDQERCKL-LDWSKRFHIICGTARGLL 500
           V+L    IH E KL L++E+M     K +D+      R  L  +  K F       +G+ 
Sbjct: 61  VRLHDV-IHTENKLMLVFEYMDKDLKKYMDTH---GVRGALDPNTVKSF--TYQLLKGIA 114

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT--NRVVGTYGYM 558
           + H++   R++HRDLK  N+L+++    K++DFGLARAFG      NT  N VV T  Y 
Sbjct: 115 FCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFG---IPVNTFSNEVV-TLWYR 167

Query: 559 APEYASDGQ-FSVKSDVFSFGILLLEIVSGK 588
           AP+     + +S   D++S G ++ E+++G+
Sbjct: 168 APDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 93.2 bits (231), Expect = 5e-21
 Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 24/226 (10%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS---KISEQGLKELKNEIILFSKLQHR 443
           NF I KK+G G F  VY+ T L D + +A+K++     +  +  ++   EI L  +L H 
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI--FDQERCKLLD----WSKRFHIICGTAR 497
           N++K L   I   E  ++ E      L   I  F +++ +L+     W K F  +C    
Sbjct: 63  NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQK-RLIPERTVW-KYFVQLCSAVE 120

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
                H  SR R++HRD+K +NV +      K+ D GL R F    T  ++  +VGT  Y
Sbjct: 121 -----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYY 172

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
           M+PE   +  ++ KSD++S G LL E+ + +    FY   +K+NL 
Sbjct: 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSP--FY--GDKMNLF 214

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 93.2 bits (232), Expect = 5e-21
 Identities = 82/291 (28%), Positives = 131/291 (45%), Gaps = 60/291 (20%)

Query: 397 EGGFGPVYKGTLAD-----EQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           EG FG ++ G L D     E+E+ VK +    SE  +  L  E  L   L H+N++ +L 
Sbjct: 16  EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILH 75

Query: 451 CCIHGEEK-LLIYEFMPNKSLDSFIFDQERCKLLDWSKR--------FHIICGTARGLLY 501
            CI   E   ++Y +M   +L  F+   ++C+L + +           H+    A G+ Y
Sbjct: 76  VCIEDGEPPFVLYPYMNWGNLKLFL---QQCRLGEANNPQALSTQQLVHMAIQIACGMSY 132

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGD-ETEG-NTNRVVGTYGYM 558
           LH   +  +IH+D+ A N ++D+++  KI+D  L+R  F  D    G N NR V    +M
Sbjct: 133 LH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPV---KWM 186

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           A E   + ++S  SDV+SFG+LL E+++  +                         P   
Sbjct: 187 ALESLVNKEYSSASDVWSFGVLLWELMTLGQ------------------------TPYVE 222

Query: 619 ID-----ACFKDSFNLAEVIRC----IHIGLLCVQQYPEDRPCMPSVILML 660
           ID     A  KD + LA+ I C      +   C    PE+RP    ++  L
Sbjct: 223 IDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCL 273

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 93.2 bits (231), Expect = 6e-21
 Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 21/211 (9%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI----SEQGLKELKNEIILFSK 439
           N  + + I  +LG+G FG VYK   A  +E  V   +K+    SE+ L++   EI + + 
Sbjct: 2   NPEEFWEIIGELGDGAFGKVYK---AQNKETGVLAAAKVIDTKSEEELEDYMVEIDILAS 58

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG-TARG 498
             H N+VKLL    +     ++ EF    ++D+ + + ER        +  ++C  T   
Sbjct: 59  CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---EPQIRVVCKQTLEA 115

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L YLH++   +IIHRDLKA N+L   D + K++DFG++       T    +  +GT  +M
Sbjct: 116 LNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQRRDSFIGTPYWM 170

Query: 559 APEY-----ASDGQFSVKSDVFSFGILLLEI 584
           APE      + D  +  K+DV+S GI L+E+
Sbjct: 171 APEVVMCETSKDRPYDYKADVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 92.9 bits (230), Expect = 1e-20
 Identities = 71/269 (26%), Positives = 141/269 (52%), Gaps = 27/269 (10%)

Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELK-NE 433
           L  + ++ +    ++  +K+G+G  G VY    +A  QE+A+++++ + +Q  KEL  NE
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 67

Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
           I++  + ++ N+V  L   + G+E  ++ E++   SL   +   E C  +D  +   +  
Sbjct: 68  ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 123

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              + L +LH +   ++IHRD+K+ N+LL  D + K++DFG       ++++   + +VG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVG 178

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           T  +MAPE  +   +  K D++S GI+ +E++ G+     Y ++N L   R  + +   G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPL---RALYLIATNG 232

Query: 614 MPS----QLIDACFKDSFNLAEVIRCIHI 638
            P     + + A F+D  N     RC+ +
Sbjct: 233 TPELQNPEKLSAIFRDFLN-----RCLDM 256

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 92.3 bits (229), Expect = 1e-20
 Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 34/213 (15%)

Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLS------KISEQGLKELKNEIILFSKLQHRNLVKL 448
           LG+G +G VY G     Q IAVK++         +E+  ++L+ E+ L   L+H N+V+ 
Sbjct: 8   LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQY 67

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH-----IICGTAR----GL 499
           LG C+      +  EF+P  S+ S +             RF      + C   +    G+
Sbjct: 68  LGTCLDDNTISIFMEFVPGGSISSIL------------NRFGPLPEPVFCKYTKQILDGV 115

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF---GGDETEGNTNRVV-GTY 555
            YLH +    ++HRD+K +NV+L  +   K+ DFG AR     G   T  N  + + GT 
Sbjct: 116 AYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTP 172

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            +MAPE  ++  +  KSD++S G  + E+ +GK
Sbjct: 173 YWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 205

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 92.3 bits (229), Expect = 1e-20
 Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 28/221 (12%)

Query: 391 INKKLGEGGFGPV----------YKGTLADEQE-----IAVKRL-SKISEQGLKELKNEI 434
           + +KLGEG FG V          + G  A E +     +AVK L + +++    +   EI
Sbjct: 9   LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEI 68

Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE-RCKL--------LDW 485
            + S+L++ N+++LLG C+  +   +I E+M N  L+ F+  +E             +  
Sbjct: 69  KIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSI 128

Query: 486 SKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE 545
           +   ++    A G+ YL   + L  +HRDL   N L+      KI+DFG++R     +  
Sbjct: 129 ANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY 185

Query: 546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               R V    +MA E    G+F+  SDV++FG+ L E+ +
Sbjct: 186 RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 91.7 bits (228), Expect = 2e-20
 Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 22/212 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRL------SKISEQGLKELKNEIILFSKL 440
           +      +LGEG  G V K  L +   I   +         + +Q L+EL+    +    
Sbjct: 1   EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELE----INKSC 56

Query: 441 QHRNLVKLLGCCI--HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF--HIICGTA 496
           +   +VK  G  +        +  E+    SLDS I+ + + +     ++    I     
Sbjct: 57  KSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDS-IYKKVKKRGGRIGEKVLGKIAESVL 115

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           +GL YLH     +IIHRD+K SN+LL +    K+ DFG++    G+          GT  
Sbjct: 116 KGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS----GELVNSLAGTFTGTSF 168

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           YMAPE      +S+ SDV+S G+ LLE+   +
Sbjct: 169 YMAPERIQGKPYSITSDVWSLGLTLLEVAQNR 200

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 91.6 bits (227), Expect = 2e-20
 Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 20/223 (8%)

Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILF 437
           +L+ + +    F + + +G G +G VYKG      ++A  ++  ++E   +E+K EI + 
Sbjct: 7   DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINML 66

Query: 438 SKL-QHRNLVKLLGCCI------HGEEKLLIYEFMPNKSLDSFIFDQE-RCKLLDWSKRF 489
            K   HRN+    G  I      H ++  L+ EF    S+   + + +      DW    
Sbjct: 67  KKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIA-- 124

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN 549
           +I     RGL +LH     ++IHRD+K  NVLL ++   K+ DFG++     D T G  N
Sbjct: 125 YICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRN 179

Query: 550 RVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSG 587
             +GT  +MAPE  +     D  +  +SD++S GI  +E+  G
Sbjct: 180 TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 91.6 bits (227), Expect = 3e-20
 Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 25/215 (11%)

Query: 393 KKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNLV 446
           ++LGE  FG +YKG L        Q +A+K L  I+  Q   E + E  L ++L H N+V
Sbjct: 11  EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIV 70

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIF--------------DQERCKLLDWSKRFHII 492
            LLG     +   +++E++    L  F+               D      LD     HI 
Sbjct: 71  CLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIA 130

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTNRV 551
              A G+ YL   S    +H+DL A N+L+ + ++ KISD GL+R  +  D        +
Sbjct: 131 IQIAAGMEYL---SSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSL 187

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +    +M PE    G+FS  SD++SFG++L EI S
Sbjct: 188 LPIR-WMPPEAIMYGKFSSDSDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 91.0 bits (226), Expect = 4e-20
 Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 25/209 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSKISEQGLKELKNEIILFSKLQH 442
           DNF    K+GEG  G V    +A +    +++AVK++    +Q  + L NE+++    QH
Sbjct: 22  DNF---VKIGEGSTGIV---CIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH 75

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC-GTARGLLY 501
            N+V++    + G+E  ++ EF+   +L   I    R       ++   +C    + L +
Sbjct: 76  PNIVEMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMN----EEQIATVCLAVLKALSF 130

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR--VVGTYGYMA 559
           LH      +IHRD+K+ ++LL  D   K+SDFG    F    ++    R  +VGT  +MA
Sbjct: 131 LHAQ---GVIHRDIKSDSILLTSDGRVKLSDFG----FCAQVSKEVPRRKSLVGTPYWMA 183

Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE  S   +  + D++S GI+++E+V G+
Sbjct: 184 PEVISRLPYGTEVDIWSLGIMVIEMVDGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 91.2 bits (227), Expect = 5e-20
 Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 37/230 (16%)

Query: 385 ATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKEL-----KNEIILFS 438
              ++ I  KLGEG FG VYK   +   + +A+K++   +E   K+        EI +  
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNE---KDGFPITALREIKILK 62

Query: 439 KLQHRNLVKLLGCCI-----HGEEKLLIYEFMPNKSLD-SFIFDQERCKLLDWSKRFHII 492
           KL+H N+V L+   +        ++  +Y   P    D S + +    KL        I 
Sbjct: 63  KLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKL----TESQIK 118

Query: 493 CGTAR---GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF---------- 539
           C   +   G+ YLH++    I+HRD+KA+N+L+D     KI+DFGLAR +          
Sbjct: 119 CYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGG 175

Query: 540 GGDETEGNTNRVVGTYGYMAPEY-ASDGQFSVKSDVFSFGILLLEIVSGK 588
           GG  T   TN VV T  Y  PE    + +++   D++  G +  E+ + +
Sbjct: 176 GGGGTRKYTNLVV-TRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRR 224

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 90.5 bits (224), Expect = 5e-20
 Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 17/216 (7%)

Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 4   AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 63

Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +       K   
Sbjct: 64  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQ 123

Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 124 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 180

Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            +    +M+PE   DG F+  SDV+SFG++L EI +
Sbjct: 181 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 216

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 90.3 bits (224), Expect = 6e-20
 Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 19/209 (9%)

Query: 388 NFSINKKLGEGGFGPVYKG-TLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRN 444
           NF   +K+GEG +G VYK       + +A+K  RL   +E        EI L  +L H N
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60

Query: 445 LVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKL---LDWSKRFHIICGTARGLL 500
           +VKLL   IH E KL L++EF+ ++ L  F+       +   L  S  F ++    +GL 
Sbjct: 61  IVKLLDV-IHTENKLYLVFEFL-HQDLKKFMDASPLSGIPLPLIKSYLFQLL----QGLA 114

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAF G      T+ VV T  Y AP
Sbjct: 115 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVV-TLWYRAP 169

Query: 561 EYASDGQF-SVKSDVFSFGILLLEIVSGK 588
           E     ++ S   D++S G +  E+V+ +
Sbjct: 170 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 90.6 bits (225), Expect = 6e-20
 Identities = 73/214 (34%), Positives = 108/214 (50%), Gaps = 26/214 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-IAVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           D +   +K+GEG +G VYK       E IA+K  RL +  E        EI L  ++QH 
Sbjct: 2   DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG 61

Query: 444 NLVKLLGCCIHGEEKL-LIYEFMP---NKSLDS---FIFDQERCKLLDWSKRFHIICGTA 496
           N+V+L    +H E++L L++E++     K +DS   F  +    K   +           
Sbjct: 62  NIVRLQDV-VHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQ--------IL 112

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTY 555
           RG+ Y H     R++HRDLK  N+L+D+  N  K++DFGLARAF G      T+ VV T 
Sbjct: 113 RGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAF-GIPVRTFTHEVV-TL 167

Query: 556 GYMAPE-YASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE       +S   D++S G +  E+V+ K
Sbjct: 168 WYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQK 201

Length = 294

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 89.7 bits (222), Expect = 7e-20
 Identities = 73/286 (25%), Positives = 129/286 (45%), Gaps = 50/286 (17%)

Query: 390 SINKKLGEGGFGPVYKGTLADEQEI---AVK--RLSKISEQGLKELKNEIILFSKLQHRN 444
           ++ K LGEG FG V +G L  +  I   AVK  +++  +   +++  +E +   +  H N
Sbjct: 2   ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPN 61

Query: 445 LVKLLGCCIHGEEK------LLIYEFMPNKSLDSFIFDQ---ERCKLLDWSKRFHIICGT 495
           +++L+G C+   E       ++I  FM +  L SF+      +  + L        +   
Sbjct: 62  VMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDI 121

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGD-ETEGNTNRVVG 553
           A G+ YL   S    IHRDL A N +L+++MN  ++DFGL++  + GD   +G   ++  
Sbjct: 122 ASGMEYL---SSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKM-- 176

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-------GKKNRGFYHSDNKLNLIRHA 606
              ++A E  +D  ++ KSDV+SFG+ + EI +       G +N   Y    + N ++  
Sbjct: 177 PVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQ- 235

Query: 607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC 652
                   P   +D  +    +             C    P+DRP 
Sbjct: 236 --------PPDCLDGLYSLMSS-------------CWLLNPKDRPS 260

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 89.4 bits (222), Expect = 1e-19
 Identities = 54/202 (26%), Positives = 103/202 (50%), Gaps = 21/202 (10%)

Query: 395 LGEGGFGPVYKGT-LADEQEIAVKRLSKISEQG-LKELKNEIILFSKLQH---RNLVKLL 449
           +G G +G VY+G  +   + +A+K ++  +    + +++ E+ L S+L+     N+ K  
Sbjct: 9   IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYY 68

Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQ---ERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           G  + G    +I E+    S+ + +      E+   +       II      L Y+H+  
Sbjct: 69  GSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISV-------IIREVLVALKYIHKVG 121

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
              +IHRD+KA+N+L+    N K+ DFG+A     ++     +  VGT  +MAPE  ++G
Sbjct: 122 ---VIHRDIKAANILVTNTGNVKLCDFGVAALL--NQNSSKRSTFVGTPYWMAPEVITEG 176

Query: 567 Q-FSVKSDVFSFGILLLEIVSG 587
           + +  K+D++S GI + E+ +G
Sbjct: 177 KYYDTKADIWSLGITIYEMATG 198

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 89.2 bits (221), Expect = 1e-19
 Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 33/216 (15%)

Query: 388 NFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRL-SKISEQGLKELKNEIILFSKLQH 442
              I K +G G FG V  G L      E  +A+K L +  +E+  ++  +E  +  +  H
Sbjct: 5   CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH 64

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC------GTA 496
            N++ L G     +  +++ E+M N SLD+F+   +         +F +I       G A
Sbjct: 65  PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHD--------GQFTVIQLVGMLRGIA 116

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
            G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R     G
Sbjct: 117 SGMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR-----G 168

Query: 557 ------YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                 + APE  +  +F+  SDV+S+GI++ E++S
Sbjct: 169 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 88.8 bits (220), Expect = 1e-19
 Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 18/202 (8%)

Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           K+LG G FG V  G    + ++A+K + +  +SE    E   E  +  KL H  LV+L G
Sbjct: 10  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMKLSHEKLVQLYG 66

Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            C       ++ E+M N  L +++  +E  K    S+   +      G+ YL      + 
Sbjct: 67  VCTKQRPIYIVTEYMSNGCLLNYL--REHGKRFQPSQLLEMCKDVCEGMAYLESK---QF 121

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAPEYASDGQ 567
           IHRDL A N L+D     K+SDFGL+R    DE   +    VG+     +  PE     +
Sbjct: 122 IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLLYSK 177

Query: 568 FSVKSDVFSFGILLLEIVS-GK 588
           FS KSDV++FG+L+ E+ S GK
Sbjct: 178 FSSKSDVWAFGVLMWEVYSLGK 199

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 89.0 bits (220), Expect = 2e-19
 Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 27/254 (10%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVK 447
           F + + +G G +G VYKG      ++A  ++  ++    +E+K EI +  K   HRN+  
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67

Query: 448 LLGCCIH------GEEKLLIYEFMPNKSLDSFIFDQERCKLLD-WSKRFHIICGTARGLL 500
             G  I        ++  L+ EF    S+   I + +   L + W    +I     RGL 
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA--YICREILRGLS 125

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           +LHQ    ++IHRD+K  NVLL ++   K+ DFG++     D T G  N  +GT  +MAP
Sbjct: 126 HLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAP 180

Query: 561 EYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI------RHAWKL 609
           E  +     D  +  KSD++S GI  +E+  G       H    L LI      R   K 
Sbjct: 181 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK 240

Query: 610 WNEGMPSQLIDACF 623
           W++   S  I++C 
Sbjct: 241 WSKKFQS-FIESCL 253

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 88.5 bits (220), Expect = 2e-19
 Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 13/207 (6%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNL 445
           +++ + +++G G +G VYK       E+   ++ K+      + ++ EI +  + +H N+
Sbjct: 3   EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI 62

Query: 446 VKLLGCCIHGEEKLLI-YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           V   G      +KL I  E+    SL      Q     L   +  ++   T +GL YLH+
Sbjct: 63  VAYFGS-YLRRDKLWIVMEYCGGGSLQDIY--QVTRGPLSELQIAYVCRETLKGLAYLHE 119

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA- 563
                 IHRD+K +N+LL +D + K++DFG++       T       +GT  +MAPE A 
Sbjct: 120 ---TGKIHRDIKGANILLTEDGDVKLADFGVSAQL--TATIAKRKSFIGTPYWMAPEVAA 174

Query: 564 --SDGQFSVKSDVFSFGILLLEIVSGK 588
               G +  K D+++ GI  +E+   +
Sbjct: 175 VERKGGYDGKCDIWALGITAIELAELQ 201

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 89.6 bits (222), Expect = 2e-19
 Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 26/223 (11%)

Query: 387 DNFSINKKLGEGGFGPVYK----GTLADEQE----IAVKRLS-KISEQGLKELKNEIILF 437
           D   + K LGEG FG V +    G      +    +AVK L    +++ L +L +E+ L 
Sbjct: 12  DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELM 71

Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERC--KLL 483
             + +H+N++ LLG C       +I E+    +L  F+           FD  +   + L
Sbjct: 72  KLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQL 131

Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
            +          ARG+ YL  +SR R IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 132 SFKDLVSCAYQVARGMEYL--ESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDID 188

Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T+       +MAPE   D  ++ +SDV+SFGIL+ EI +
Sbjct: 189 YYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 88.7 bits (220), Expect = 2e-19
 Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 37/217 (17%)

Query: 387 DNFSINKKLGEGGFGPVYK------GTLADEQEIAVKRLSKISEQGLKELKNEIILFSKL 440
           ++      LG G  G V K      GT+  ++ + +   S + +Q L+EL+    +  + 
Sbjct: 5   EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQ----IMHEC 60

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF---------HI 491
           +   +V   G  ++     +  EFM   SLD               K+           I
Sbjct: 61  RSPYIVSFYGAFLNENNICMCMEFMDCGSLDRI------------YKKGGPIPVEILGKI 108

Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
                 GL YL+  +  RI+HRD+K SN+L++     K+ DFG++    G+      +  
Sbjct: 109 AVAVVEGLTYLY--NVHRIMHRDIKPSNILVNSRGQIKLCDFGVS----GELINSIADTF 162

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           VGT  YM+PE    G+++VKSDV+S GI ++E+  GK
Sbjct: 163 VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 89.3 bits (221), Expect = 2e-19
 Identities = 65/208 (31%), Positives = 109/208 (52%), Gaps = 20/208 (9%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQH 442
           F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + +
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD-QERC---KLLDWSKRFHIICGTARG 498
            ++ +LLG C+    +L I + MP   L  ++ + ++      LL+W  +       A+G
Sbjct: 69  PHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 121

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           + YL +    R++HRDL A NVL+    + KI+DFGLA+  G DE E +         +M
Sbjct: 122 MNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWM 178

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVS 586
           A E      ++ +SDV+S+G+ + E+++
Sbjct: 179 ALESILHRIYTHQSDVWSYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 88.6 bits (219), Expect = 2e-19
 Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 11/217 (5%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLV 446
           F+  +++G+G FG VYKG     +E+   ++  +  +E  +++++ EI + S+     + 
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 65

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +  G  + G +  +I E++   S      D  +   L+ +    I+    +GL YLH + 
Sbjct: 66  RYYGSYLKGTKLWIIMEYLGGGS----ALDLLKPGPLEETYIATILREILKGLDYLHSE- 120

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
             R IHRD+KA+NVLL +  + K++DFG+A      +T+   N  VGT  +MAPE     
Sbjct: 121 --RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQS 176

Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
            +  K+D++S GI  +E+  G+      H    L LI
Sbjct: 177 AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI 213

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 88.2 bits (218), Expect = 3e-19
 Identities = 78/273 (28%), Positives = 123/273 (45%), Gaps = 31/273 (11%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS---KISEQGLKELKNEIILFSKLQHR 443
           NF I KK+G G F  VY+ T L D   +A+K++     +  +   +   EI L  +L H 
Sbjct: 3   NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI--FDQERCKLLD---WSKRFHIICGTARG 498
           N++K     I   E  ++ E      L   I  F +++  + +   W K F  +C     
Sbjct: 63  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVW-KYFVQLCSALE- 120

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
               H  SR R++HRD+K +NV +      K+ D GL R F    T  ++  +VGT  YM
Sbjct: 121 ----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYM 173

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           +PE   +  ++ KSD++S G LL E+ + +    FY   +K+NL     K+     P   
Sbjct: 174 SPERIHENGYNFKSDIWSLGCLLYEMAALQSP--FY--GDKMNLYSLCKKIEQCDYPPLP 229

Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            D   ++   L           +C+   PE RP
Sbjct: 230 SDHYSEELRQLVN---------MCINPDPEKRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 87.7 bits (217), Expect = 3e-19
 Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 21/204 (10%)

Query: 388 NFSINKKLGEGGFGPV----YKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR 443
              + + +G+G FG V    Y+G      ++AVK +   ++   +    E  + ++L+H 
Sbjct: 7   ELKLLQTIGKGEFGDVMLGDYRGN-----KVAVKCIK--NDATAQAFLAEASVMTQLRHS 59

Query: 444 NLVKLLGCCIHGEEKLLIY-EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           NLV+LLG  +  +  L I  E+M   SL  ++  + R  +L               + YL
Sbjct: 60  NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYL 118

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
             ++    +HRDL A NVL+ +D   K+SDFGL +     E     +       + APE 
Sbjct: 119 EANN---FVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEA 170

Query: 563 ASDGQFSVKSDVFSFGILLLEIVS 586
             + +FS KSDV+SFGILL EI S
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 87.7 bits (218), Expect = 3e-19
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 28/206 (13%)

Query: 398 GGFGPVY---KGTLADEQEI-AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCI 453
           G +G V+   K +  D   I  +K+   I +  + ++  E  + S+ Q   +VKL     
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY-YSF 62

Query: 454 HGEEKL-LIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
            G++ L L+ E++P   L S +      D++  +          I      L YLH    
Sbjct: 63  QGKKNLYLVMEYLPGGDLASLLENVGSLDEDVAR--------IYIAEIVLALEYLHS--- 111

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLA------RAFGGDETEGNTNRVVGTYGYMAPE 561
             IIHRDLK  N+L+D + + K++DFGL+      R    ++ E    R+VGT  Y+APE
Sbjct: 112 NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPE 171

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSG 587
                  S   D +S G +L E + G
Sbjct: 172 VILGQGHSKTVDWWSLGCILYEFLVG 197

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 87.7 bits (217), Expect = 4e-19
 Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 39/216 (18%)

Query: 389 FSINKKLGEGGFGPVY--KGTLADEQEIAVKRLSKISEQGLKELK-NEII-------LFS 438
           + + ++LG+G FG VY  K   A  +E    RL  + E  + EL  NE +       L S
Sbjct: 2   YILQQRLGKGSFGTVYLVKDKKAVAEE----RLKVLKEIPVGELNPNETVQANQEAQLLS 57

Query: 439 KLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK----------LLDWSKR 488
           KL H  +VK     +  +   +I E+   + LD      E  K          + +W   
Sbjct: 58  KLDHPAIVKFHASFLERDAFCIITEYCEGRDLD---CKLEELKHTGKTLSENQVCEW--- 111

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
                    G+ Y+HQ    RI+HRDLKA N+ L  ++  KI DFG++R   G      T
Sbjct: 112 ---FIQLLLGVHYMHQR---RILHRDLKAKNIFLKNNL-LKIGDFGVSRLLMGSCDLATT 164

Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEI 584
               GT  YM+PE      +  KSD++S G +L E+
Sbjct: 165 --FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEM 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 88.2 bits (218), Expect = 4e-19
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 21/216 (9%)

Query: 394 KLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLL 449
           K+GEG  G V    +A E+    ++AVK +    +Q  + L NE+++    QH+N+V++ 
Sbjct: 28  KIGEGSTGIV---CIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMY 84

Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA-RGLLYLHQDSRL 508
              + GEE  ++ EF+   +L   I  Q R       ++   +C +  + L YLH     
Sbjct: 85  KSYLVGEELWVLMEFLQGGALTD-IVSQTRLN----EEQIATVCESVLQALCYLHSQG-- 137

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF 568
            +IHRD+K+ ++LL  D   K+SDFG       D  +  +  +VGT  +MAPE  S   +
Sbjct: 138 -VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS--LVGTPYWMAPEVISRTPY 194

Query: 569 SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIR 604
             + D++S GI+++E+V G+     Y SD+ +  ++
Sbjct: 195 GTEVDIWSLGIMVIEMVDGEPP---YFSDSPVQAMK 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 87.2 bits (216), Expect = 4e-19
 Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 15/203 (7%)

Query: 393 KKLGEGGFGPVY--KGTLADEQEIAVKRLS--KISEQGLKELKNEIILFSKLQHRNLVKL 448
           + +G G FG V+  +   AD++ + +K++   ++++      +NE  +   L H N+++ 
Sbjct: 6   RVVGRGAFGIVHLCRR-KADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEY 64

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK-LLDWSKRFHIICGTARGLLYLHQDSR 507
               +  +  +++ E+ P  +L  +I  Q+RC  LLD     H        L ++H    
Sbjct: 65  YENFLEDKALMIVMEYAPGGTLAEYI--QKRCNSLLDEDTILHFFVQILLALHHVHTKL- 121

Query: 508 LRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
             I+HRDLK  N+LLD+  M  KI DFG+++      ++     VVGT  Y++PE     
Sbjct: 122 --ILHRDLKTQNILLDKHKMVVKIGDFGISKILS---SKSKAYTVVGTPCYISPELCEGK 176

Query: 567 QFSVKSDVFSFGILLLEIVSGKK 589
            ++ KSD+++ G +L E+ S K+
Sbjct: 177 PYNQKSDIWALGCVLYELASLKR 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 87.1 bits (215), Expect = 6e-19
 Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 11/217 (5%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLV 446
           F+  +K+G+G FG V+KG     Q++   ++  +  +E  +++++ EI + S+     + 
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           K  G  +   +  +I E++   S      D      LD ++   I+    +GL YLH + 
Sbjct: 66  KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 121

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           +   IHRD+KA+NVLL +    K++DFG+A      +T+   N  VGT  +MAPE     
Sbjct: 122 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQS 176

Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
            +  K+D++S GI  +E+  G+      H    L LI
Sbjct: 177 AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI 213

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 87.0 bits (215), Expect = 8e-19
 Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 11/202 (5%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEI-AVKRLS-KISEQGLKELKNEIILFSKLQHRNLV 446
           F+  +++G+G FG V+KG     Q++ A+K +  + +E  +++++ EI + S+     + 
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           K  G  + G +  +I E++   S      D  R    D  +   ++    +GL YLH + 
Sbjct: 66  KYYGSYLKGTKLWIIMEYLGGGS----ALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK 121

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           +   IHRD+KA+NVLL +  + K++DFG+A      +T+   N  VGT  +MAPE     
Sbjct: 122 K---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIQQS 176

Query: 567 QFSVKSDVFSFGILLLEIVSGK 588
            +  K+D++S GI  +E+  G+
Sbjct: 177 AYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 87.4 bits (217), Expect = 8e-19
 Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 52/296 (17%)

Query: 390 SINKKLGEGGFGPVYKGTLADEQEI-----------------AVKRLSK-ISEQGLKELK 431
           +  +KLGEG FG V+       Q+                  AVK L    S+   ++  
Sbjct: 8   NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFL 67

Query: 432 NEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI--------FDQERCKLL 483
            E+ + S+L   N+ +LLG C       +I E+M N  L+ F+              K L
Sbjct: 68  KEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSL 127

Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGD 542
            +S   ++    A G+ YL     L  +HRDL   N L+ ++   KI+DFG++R  +  D
Sbjct: 128 SFSTLLYMATQIASGMRYL---ESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSD 184

Query: 543 --ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
               +G   R      +MA E    G+F+ KSDV++FG+ L EI++  + + + H  ++ 
Sbjct: 185 YYRVQG---RAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ 241

Query: 601 ---NLIRHAWKLWNEGMPSQL--IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
              N         ++G    L     C KD + L          L C ++  EDRP
Sbjct: 242 VIENAGH---FFRDDGRQIYLPRPPNCPKDIYELM---------LECWRRDEEDRP 285

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 86.4 bits (214), Expect = 8e-19
 Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 27/207 (13%)

Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           K+LG G FG V+ G    + ++A+K +++  +SE+   E   E  +  KL H  LV+L G
Sbjct: 10  KELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIE---EAKVMMKLSHPKLVQLYG 66

Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI-IC-GTARGLLYLHQDSRL 508
            C   +   ++ EFM N  L +++  Q + KL   SK   + +C     G+ YL ++S  
Sbjct: 67  VCTQQKPLYIVTEFMENGCLLNYL-RQRQGKL---SKDMLLSMCQDVCEGMEYLERNS-- 120

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG------YMAPEY 562
             IHRDL A N L+      K+SDFG+ R    DE          + G      +  PE 
Sbjct: 121 -FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE-------YTSSSGAKFPVKWSPPEV 172

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKK 589
            +  ++S KSDV+SFG+L+ E+ +  K
Sbjct: 173 FNFSKYSSKSDVWSFGVLMWEVFTEGK 199

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 87.4 bits (216), Expect = 9e-19
 Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 34/215 (15%)

Query: 395 LGEGGFGPVYKGTLADE---QEIAVKRLSK-ISEQGLKELKNEIILFSKL-QHRNLVKLL 449
           +GEG FG V K  +  +    + A+KR+ +  S+   ++   E+ +  KL  H N++ LL
Sbjct: 15  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74

Query: 450 GCCIHGEEKLLIYEFMPNKSL-------------DSFIFDQERCKLLDWSKRFHIICGTA 496
           G C H     L  E+ P+ +L              +F         L   +  H     A
Sbjct: 75  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 134

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           RG+ YL Q    + IHRDL A N+L+ ++   KI+DFGL+R        G    V  T G
Sbjct: 135 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--------GQEVYVKKTMG 183

Query: 557 -----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                +MA E  +   ++  SDV+S+G+LL EIVS
Sbjct: 184 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 218

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 85.0 bits (210), Expect = 3e-18
 Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 20/207 (9%)

Query: 393 KKLGEGGFGPVYKG---TLADEQEIAVKRLSKIS-EQGLK-ELKNEIILFSKLQHRNLVK 447
            +LG G FG V KG       E+ +AVK L   + +  LK EL  E  +  +L +  +V+
Sbjct: 1   GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVR 60

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           ++G C   E  +L+ E      L+ F+   +     + ++  H +   + G+ YL + + 
Sbjct: 61  MIGIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQV---SMGMKYLEETN- 115

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT----YGYMAPEYA 563
              +HRDL A NVLL      KISDFGL++A G DE   N  +          + APE  
Sbjct: 116 --FVHRDLAARNVLLVTQHYAKISDFGLSKALGADE---NYYKAKTHGKWPVKWYAPECM 170

Query: 564 SDGQFSVKSDVFSFGILLLEIVS-GKK 589
           +  +FS KSDV+SFG+L+ E  S G+K
Sbjct: 171 NYYKFSSKSDVWSFGVLMWEAFSYGQK 197

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 85.1 bits (210), Expect = 3e-18
 Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 20/204 (9%)

Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLV 446
           K LG G FG VYKG    + E     +A+K L +  S +  KE+ +E  + + +    + 
Sbjct: 13  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVC 72

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTARGLLYL 502
           +LLG C+    +L + + MP   L  ++ + +       LL+W  +       A+G+ YL
Sbjct: 73  RLLGICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQI------AKGMSYL 125

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +   +R++HRDL A NVL+    + KI+DFGLAR    DETE + +       +MA E 
Sbjct: 126 EE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 182

Query: 563 ASDGQFSVKSDVFSFGILLLEIVS 586
               +F+ +SDV+S+G+ + E+++
Sbjct: 183 ILHRRFTHQSDVWSYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 84.6 bits (210), Expect = 4e-18
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 23/203 (11%)

Query: 395 LGEGGFGPVYKGTLADEQEI-AVKRLSK--ISEQGLKE-LKNEIILFSKLQHRNLVKLLG 450
           LG GGFG V    +  +    A+K + K  I E G +E + +E  +  +  H  +VKL  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKL-- 58

Query: 451 CCIHG--EEKLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
              +   ++K  IY   E+     L + +  ++R    +++ RF+I C       YLH  
Sbjct: 59  ---YRTFKDKKYIYMLMEYCLGGELWTIL--RDRGLFDEYTARFYIACVV-LAFEYLH-- 110

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
               II+RDLK  N+LLD +   K+ DFG A+     +    T    GT  Y+APE   +
Sbjct: 111 -NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILN 166

Query: 566 GQFSVKSDVFSFGILLLEIVSGK 588
             +    D +S GILL E+++G+
Sbjct: 167 KGYDFSVDYWSLGILLYELLTGR 189

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 85.5 bits (211), Expect = 4e-18
 Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 36/271 (13%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEI-AVKRLS---KISEQGLKELKNEIILFSKLQHRN 444
           F+  +++G G FG VY        E+ A+K++S   K S +  +++  E+    +++H N
Sbjct: 27  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
            ++  GC +      L+ E+    + D     ++  + ++ +   H   G  +GL YLH 
Sbjct: 87  SIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITH---GALQGLAYLHS 143

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY-- 562
            +   +IHRD+KA N+LL +    K++DFG A            N  VGT  +MAPE   
Sbjct: 144 HN---MIHRDIKAGNILLTEPGQVKLADFGSA------SIASPANSFVGTPYWMAPEVIL 194

Query: 563 -ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
              +GQ+  K DV+S GI  +E+   K       + N ++ + H  +  NE    Q  + 
Sbjct: 195 AMDEGQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQ--NESPTLQSNE- 248

Query: 622 CFKDSF-NLAEVIRCIHIGLLCVQQYPEDRP 651
            + D F N  +          C+Q+ P+DRP
Sbjct: 249 -WSDYFRNFVDS---------CLQKIPQDRP 269

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 85.5 bits (211), Expect = 5e-18
 Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 19/202 (9%)

Query: 394 KLGEGGFGPVYKGTLADEQEI-AVKRLS---KISEQGLKELKNEIILFSKLQHRNLVKLL 449
           ++G G FG VY  T +   E+ AVK++S   K + +  +++  E+    +L+H N ++  
Sbjct: 28  EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK 87

Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
           GC +      L+ E+    + D     ++  + ++ +   H   G  +GL YLH  +   
Sbjct: 88  GCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITH---GALQGLAYLHSHN--- 141

Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY---ASDG 566
           +IHRD+KA N+LL +    K++DFG A            N  VGT  +MAPE      +G
Sbjct: 142 MIHRDIKAGNILLTEPGQVKLADFGSA------SKSSPANSFVGTPYWMAPEVILAMDEG 195

Query: 567 QFSVKSDVFSFGILLLEIVSGK 588
           Q+  K DV+S GI  +E+   K
Sbjct: 196 QYDGKVDVWSLGITCIELAERK 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 85.5 bits (211), Expect = 5e-18
 Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 26/221 (11%)

Query: 389 FSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILFSK 439
            ++ K LGEG FG V         K        +AVK L    +++ L +L +E+ +   
Sbjct: 14  LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKM 73

Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI---------FDQERCKLLDWSKRF 489
           + +H+N++ LLG C       ++ E+    +L  ++         +  + CKL +    F
Sbjct: 74  IGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTF 133

Query: 490 H--IICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE 545
              + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR     +  
Sbjct: 134 KDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYY 190

Query: 546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
             T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 191 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 85.1 bits (210), Expect = 5e-18
 Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 26/225 (11%)

Query: 385 ATDNFSINKKLGEGGFGPVYKGT---LADEQ-----EIAVKRL-SKISEQGLKELKNEII 435
             D   + K LGEG FG V       L  E+     ++AVK L S  +E+ L +L +E+ 
Sbjct: 16  PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEME 75

Query: 436 LFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLL 483
           +   + +H+N++ LLG C       +I E+    +L  ++           ++  +    
Sbjct: 76  MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEE 135

Query: 484 DWSKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
             S +  + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR    
Sbjct: 136 QLSFKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 192

Query: 542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            +    T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 193 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 84.9 bits (210), Expect = 6e-18
 Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 34/266 (12%)

Query: 393 KKLGEGGFGPVYKGT-LADEQEIAVKRLS---KISEQGLKELKNEIILFSKLQHRNLVKL 448
           +++G G FG VY    +   + +A+K++S   K S +  +++  E+    +L+H N ++ 
Sbjct: 21  REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEY 80

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
            GC +      L+ E+    + D  I +  + K L   +   I  G  +GL YLH   R 
Sbjct: 81  KGCYLREHTAWLVMEYCLGSASD--ILEVHK-KPLQEVEIAAICHGALQGLAYLHSHER- 136

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE--YASD- 565
             IHRD+KA N+LL +    K++DFG A            N  VGT  +MAPE   A D 
Sbjct: 137 --IHRDIKAGNILLTEPGTVKLADFGSA------SLVSPANSFVGTPYWMAPEVILAMDE 188

Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD 625
           GQ+  K DV+S GI  +E+   K       + N ++ + H  +  +  + S      F++
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNDSPTLSSNDWSDYFRN 245

Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRP 651
             +             C+Q+ P+DRP
Sbjct: 246 FVD------------SCLQKIPQDRP 259

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 84.2 bits (208), Expect = 6e-18
 Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 22/215 (10%)

Query: 389 FSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSK--ISEQGLKELKNEIILFSKLQH 442
           F++ + LG+G FG V +  L  E    Q++AVK L     S   ++E   E     +  H
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH 60

Query: 443 RNLVKLLGCCIHGEEK------LLIYEFMPNKSLDSFIFDQ---ERCKLLDWSKRFHIIC 493
            N++KL+G  +    K      ++I  FM +  L +F+      E    L        + 
Sbjct: 61  PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMI 120

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGD-ETEGNTNRV 551
             A G+ YL   S    IHRDL A N +L+++M   ++DFGL++  + GD   +G  +++
Sbjct: 121 DIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKL 177

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                ++A E  +D  ++  SDV++FG+ + EI++
Sbjct: 178 --PVKWLALESLADNVYTTHSDVWAFGVTMWEIMT 210

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 84.7 bits (209), Expect = 7e-18
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 26/223 (11%)

Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLS-KISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 15  DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 74

Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 75  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQM 134

Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 135 TFKDLVSCTYQVARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNID 191

Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 192 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 83.9 bits (207), Expect = 8e-18
 Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 22/205 (10%)

Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRL-SKISEQGLKELKNEIILFSKLQHRNLV 446
           K LG G FG V+KG    E +     +A+K +  +   Q  +E+ + ++    L H  +V
Sbjct: 13  KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIV 72

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQER-----CKLLDWSKRFHIICGTARGLLY 501
           +LLG C  G    L+ +  P  SL   +  Q R      +LL+W  +       A+G+ Y
Sbjct: 73  RLLGIC-PGASLQLVTQLSPLGSLLDHV-RQHRDSLDPQRLLNWCVQI------AKGMYY 124

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L +    R++HR+L A N+LL  D   +I+DFG+A     D+ +   +       +MA E
Sbjct: 125 LEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALE 181

Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
               G+++ +SDV+S+G+ + E++S
Sbjct: 182 SILFGRYTHQSDVWSYGVTVWEMMS 206

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 84.3 bits (208), Expect = 9e-18
 Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 26/259 (10%)

Query: 394 KLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCC 452
           K+GEG  G V   T     +++AVK++    +Q  + L NE+++     H N+V +    
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC-GTARGLLYLHQDSRLRII 511
           + G+E  ++ EF+   +L   I    R       ++   +C    R L YLH      +I
Sbjct: 89  LVGDELWVVMEFLEGGALTD-IVTHTRMN----EEQIATVCLSVLRALSYLHNQG---VI 140

Query: 512 HRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVK 571
           HRD+K+ ++LL  D   K+SDFG       +  +  +  +VGT  +MAPE  S   +  +
Sbjct: 141 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKS--LVGTPYWMAPEVISRLPYGTE 198

Query: 572 SDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAE 631
            D++S GI+++E++ G+     Y ++  L  +R       + +P ++     KDS  ++ 
Sbjct: 199 VDIWSLGIMVIEMIDGEPP---YFNEPPLQAMRRI----RDNLPPRV-----KDSHKVSS 246

Query: 632 VIRCIHIGLLCVQQYPEDR 650
           V+R   + L+ V++ P  R
Sbjct: 247 VLRGF-LDLMLVRE-PSQR 263

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 83.1 bits (205), Expect = 1e-17
 Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 11/198 (5%)

Query: 393 KKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVKLLG 450
           +++G G FG V+ G L AD   +AVK   +     LK +   E  +  +  H N+V+L+G
Sbjct: 1   ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 60

Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            C   +   ++ E +      +F+  +     L   +   ++   A G+ YL        
Sbjct: 61  VCTQKQPIYIVMELVQGGDFLTFL--RTEGPRLKVKELIQMVENAAAGMEYLESKH---C 115

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGNTNRVVGTYGYMAPEYASDGQF 568
           IHRDL A N L+ +    KISDFG++R    G   + G   ++     + APE  + G++
Sbjct: 116 IHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI--PVKWTAPEALNYGRY 173

Query: 569 SVKSDVFSFGILLLEIVS 586
           S +SDV+SFGILL E  S
Sbjct: 174 SSESDVWSFGILLWEAFS 191

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 83.9 bits (207), Expect = 1e-17
 Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 33/224 (14%)

Query: 385 ATDNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSK-ISEQGLKELKNEIILF 437
           + +  ++ ++LG+G FG VY+G   D      E  +AVK +++  S +   E  NE  + 
Sbjct: 4   SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 63

Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD-----------WS 486
                 ++V+LLG    G+  L++ E M +  L S++    R    +             
Sbjct: 64  KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL----RSLRPEAENNPGRPPPTLQ 119

Query: 487 KRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 546
           +   +    A G+ YL+     + +HRDL A N ++  D   KI DFG+ R    D  E 
Sbjct: 120 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYET 172

Query: 547 NTNRVVGT----YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +  R  G       +MAPE   DG F+  SD++SFG++L EI S
Sbjct: 173 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 83.9 bits (207), Expect = 1e-17
 Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 21/223 (9%)

Query: 379 LATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEI-IL 436
           L ++ + TD + I + +G+G +G VYK T   D    AVK L  IS+   +E++ E  IL
Sbjct: 14  LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD-EEIEAEYNIL 72

Query: 437 FSKLQHRNLVKLLGC------CIHGEEKLLIYEFMPNKSLDSFIFDQERC-KLLDWSKRF 489
            S   H N+VK  G        + G+   L+ E     S+   +     C + LD +   
Sbjct: 73  QSLPNHPNVVKFYGMFYKADKLVGGQ-LWLVLELCNGGSVTELVKGLLICGQRLDEAMIS 131

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN 549
           +I+ G   GL +LH +   RIIHRD+K +N+LL  +   K+ DFG++          NT+
Sbjct: 132 YILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS 188

Query: 550 RVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSG 587
             VGT  +MAPE  +     D  +  + DV+S GI  +E+  G
Sbjct: 189 --VGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG 229

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 83.7 bits (208), Expect = 2e-17
 Identities = 67/240 (27%), Positives = 108/240 (45%), Gaps = 47/240 (19%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN---EIILFSKLQHRN 444
           + + K +G G +G V           +A+K++S +    L + K    EI L   L+H N
Sbjct: 2   YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNV-FDDLIDAKRILREIKLLRHLRHEN 60

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKLLDWSKRF------- 489
           ++ LL             + +   S + F        + + +  K++  S +        
Sbjct: 61  IIGLL-------------DILRPPSPEDFNDVYIVTELMETDLHKVIK-SPQPLTDDHIQ 106

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-- 547
           + +    RGL YLH      +IHRDLK SN+L++ + + KI DFGLAR    DE E    
Sbjct: 107 YFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFL 163

Query: 548 TNRVVGTYGYMAPE-YASDGQFSVKSDVFSFGILLLEIVSGK---KNRGFYHSDNKLNLI 603
           T  VV T  Y APE   S  +++   D++S G +  E+++ K     R +     +LNLI
Sbjct: 164 TEYVV-TRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID---QLNLI 219

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 83.6 bits (206), Expect = 2e-17
 Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 34/270 (12%)

Query: 389 FSINKKLGEGGFGPVYKG-TLADEQEIAVKRLS---KISEQGLKELKNEIILFSKLQHRN 444
           FS  +++G G FG VY    + + + +A+K++S   K S +  +++  E+    KL+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
            ++  GC +      L+ E+    + D     ++  + ++ +   H   G  +GL YLH 
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH---GALQGLAYLHS 133

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY-- 562
            +   +IHRD+KA N+LL +    K+ DFG A            N  VGT  +MAPE   
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 184

Query: 563 -ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
              +GQ+  K DV+S GI  +E+   ++    ++  N ++ + H  +  +  + S     
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNM-NAMSALYHIAQNESPALQSGHWSE 241

Query: 622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            F++  +             C+Q+ P+DRP
Sbjct: 242 YFRNFVD------------SCLQKIPQDRP 259

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 83.0 bits (206), Expect = 2e-17
 Identities = 69/213 (32%), Positives = 95/213 (44%), Gaps = 31/213 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK--ISEQGLKE-LKNEIILFSKLQH 442
           D+F   K LG G FG V         +  A+K LSK  I +    E + NE  +   ++H
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH 60

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR----- 497
             LV L G         L+ E++P   L    F       L  S RF      AR     
Sbjct: 61  PFLVNLYGSFQDDSNLYLVMEYVPGGEL----FS-----HLRKSGRFPE--PVARFYAAQ 109

Query: 498 ---GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
               L YLH    L I++RDLK  N+LLD D   KI+DFG A+       +G T  + GT
Sbjct: 110 VVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAK-----RVKGRTYTLCGT 161

Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
             Y+APE      +    D ++ GIL+ E+++G
Sbjct: 162 PEYLAPEIILSKGYGKAVDWWALGILIYEMLAG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 83.1 bits (205), Expect = 2e-17
 Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 15/204 (7%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           DNF    K+GEG  G V   T+    + +AVK++    +Q  + L NE+++    QH N+
Sbjct: 23  DNFI---KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC-GTARGLLYLHQ 504
           V++    + G+E  ++ EF+   +L   I    R       ++   +C    + L  LH 
Sbjct: 80  VEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMN----EEQIAAVCLAVLKALSVLHA 134

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS 564
                +IHRD+K+ ++LL  D   K+SDFG       +     +  +VGT  +MAPE  S
Sbjct: 135 QG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS--LVGTPYWMAPELIS 189

Query: 565 DGQFSVKSDVFSFGILLLEIVSGK 588
              +  + D++S GI+++E+V G+
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 82.1 bits (203), Expect = 3e-17
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 15/210 (7%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQGLKEL-KNEIILFSKLQ 441
           ++ ++ + +GEG FG VY+G     +     +AVK     +   ++E    E  +  +  
Sbjct: 6   EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD 65

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-FDQERCKLLDWSKRFHIICGTARGLL 500
           H ++VKL+G         ++ E  P   L S++  ++    L       + +      L 
Sbjct: 66  HPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLS---TALA 121

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           YL      R +HRD+ A NVL+      K+ DFGL+R    DE+    ++      +MAP
Sbjct: 122 YLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL-EDESYYKASKGKLPIKWMAP 177

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVS-GKK 589
           E  +  +F+  SDV+ FG+ + EI+  G K
Sbjct: 178 ESINFRRFTSASDVWMFGVCMWEILMLGVK 207

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 82.4 bits (204), Expect = 3e-17
 Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 18/204 (8%)

Query: 395 LGEGGFGPVYKGTLAD-EQEIAVKRLSKIS-EQGLKELKNEIILFSKLQH-RNLVKLLGC 451
           +G G FG V K         +AVKR+     E+  K L  ++ +  +      +VK  G 
Sbjct: 12  IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGA 71

Query: 452 CIHGEEKLLIYEFMPNKSLDSF---IFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
                +  +  E M + SLD F   +++  +  ++       I   T + L YL ++  L
Sbjct: 72  LFREGDCWICMELM-DISLDKFYKYVYEVLK-SVIPEEILGKIAVATVKALNYLKEE--L 127

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE----YAS 564
           +IIHRD+K SN+LLD++ N K+ DFG++   G         R  G   YMAPE     A 
Sbjct: 128 KIIHRDVKPSNILLDRNGNIKLCDFGIS---GQLVDSIAKTRDAGCRPYMAPERIDPSAR 184

Query: 565 DGQFSVKSDVFSFGILLLEIVSGK 588
           DG + V+SDV+S GI L E+ +GK
Sbjct: 185 DG-YDVRSDVWSLGITLYEVATGK 207

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 81.5 bits (201), Expect = 3e-17
 Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 14/203 (6%)

Query: 394 KLGEGGFGPVYKGTLADEQ---EIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVKLL 449
           +LG G FG V KG     +   ++A+K L   +E+ ++ E+  E  +  +L +  +V+++
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI 61

Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
           G C   E  +L+ E      L+ F+  ++    +  S    ++   + G+ YL   +   
Sbjct: 62  GVC-EAEALMLVMEMASGGPLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGKN--- 115

Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYASDGQ 567
            +HRDL A NVLL      KISDFGL++A G D++     R  G +   + APE  +  +
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY-YKARSAGKWPLKWYAPECINFRK 174

Query: 568 FSVKSDVFSFGILLLEIVS-GKK 589
           FS +SDV+S+GI + E  S G+K
Sbjct: 175 FSSRSDVWSYGITMWEAFSYGQK 197

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 81.7 bits (201), Expect = 4e-17
 Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADE-QEIAVKRL-----SKISEQGLKELKNEIILFSKLQ 441
           N+   K LG+G FG VY     D  +E+A K++     S  + + +  L+ EI L   LQ
Sbjct: 3   NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ 62

Query: 442 HRNLVKLLGCCI-HGEEKLLIY-EFMPNKSLDSFIFDQERC-KLLDWSKRFHIICGTARG 498
           H  +V+  GC     E+ L I+ E+MP  S+     DQ +    L  S           G
Sbjct: 63  HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVK----DQLKAYGALTESVTRKYTRQILEG 118

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR-VVGTYGY 557
           + YLH +    I+HRD+K +N+L D   N K+ DFG ++        G   R V GT  +
Sbjct: 119 MSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYW 175

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           M+PE  S   +  K+DV+S G  ++E+++ K
Sbjct: 176 MSPEVISGEGYGRKADVWSLGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 81.9 bits (202), Expect = 5e-17
 Identities = 71/208 (34%), Positives = 105/208 (50%), Gaps = 24/208 (11%)

Query: 393 KKLGEGGFGPVY------KGTLADEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNL 445
           + LGEG FG V       +G    EQ +AVK L   S    + +LK EI +   L H N+
Sbjct: 10  RDLGEGHFGKVELCRYDPEGDNTGEQ-VAVKSLKPESGGNHIADLKKEIEILRNLYHENI 68

Query: 446 VKLLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI-ICGTARGLLYL 502
           VK  G C         LI EF+P+ SL  ++   +    L    ++ + IC   +G+ YL
Sbjct: 69  VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQIC---KGMDYL 125

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE----TEGNTNRVVGTYGYM 558
              SR + +HRDL A NVL++ +   KI DFGL +A   D+     + + +  V  Y   
Sbjct: 126 --GSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWY--- 179

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVS 586
           APE     +F + SDV+SFG+ L E+++
Sbjct: 180 APECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 81.9 bits (203), Expect = 5e-17
 Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 37/210 (17%)

Query: 395 LGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQG--LKELKNEIILFSKLQ---HRNLVK 447
           +GEG +G VYK   L   + +A+K++   +SE+G  L  L+ EI L  +L+   H N+V+
Sbjct: 7   IGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLR-EIALLKQLESFEHPNIVR 65

Query: 448 LLGCC--IHGEEKL---LIYEFMPNKSLDSFIFDQERC--KLLDWSKRFHIICGTARGLL 500
           LL  C     + +L   L++E + ++ L +++    +C    L       ++    RG+ 
Sbjct: 66  LLDVCHGPRTDRELKLTLVFEHV-DQDLATYL---SKCPKPGLPPETIKDLMRQLLRGVD 121

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           +LH     RI+HRDLK  N+L+  D   KI+DFGLAR +        T+ VV T  Y AP
Sbjct: 122 FLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIY--SFEMALTSVVV-TLWYRAP 175

Query: 561 E------YASDGQFSVKSDVFSFGILLLEI 584
           E      YA+     V  D++S G +  E+
Sbjct: 176 EVLLQSSYAT----PV--DMWSVGCIFAEL 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 81.4 bits (201), Expect = 6e-17
 Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 42/292 (14%)

Query: 388 NFSINKKLGEGGFGPVYK-------GTLADEQEIAVKRLS-----KISEQGLKELKNEI- 434
            +++ + LG G FG VYK         L   +EI V   +     +  ++ + ++ +E+ 
Sbjct: 1   EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVT 60

Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL-DSFIFDQERCKLLDWSKRFHIIC 493
           I+  +L+H N+V+     +  +   ++ + +    L + F   +E+ +     + ++I  
Sbjct: 61  IIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV 120

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
                L YLH++ R  I+HRDL  +N++L +D    I+DFGLA+       E     VVG
Sbjct: 121 QMVLALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQ---PESKLTSVVG 175

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL----IRHAWKL 609
           T  Y  PE   +  +  K+DV++FG +L ++ + +     ++S N L+L    +   ++ 
Sbjct: 176 TILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP---FYSTNMLSLATKIVEAVYEP 232

Query: 610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG 661
             EGM S+ +                      C+    E RP +  V  M+ 
Sbjct: 233 LPEGMYSEDVTDVITS----------------CLTPDAEARPDIIQVSAMIS 268

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 81.2 bits (200), Expect = 6e-17
 Identities = 75/246 (30%), Positives = 121/246 (49%), Gaps = 21/246 (8%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADE-QEIAVKRL-----SKISEQGLKELKNEIILFSKLQ 441
           N+ + K LG G FG VY    AD  +E+AVK++     S+ + + +  L+ EI L   L+
Sbjct: 3   NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR 62

Query: 442 HRNLVKLLGCCI-HGEEKLLIY-EFMPNKSLDSFIFDQERC--KLLDWSKRFHIICGTAR 497
           H  +V+  GC     E+KL I+ E+MP  S    I DQ +    L +   R +      +
Sbjct: 63  HDRIVQYYGCLRDPEEKKLSIFVEYMPGGS----IKDQLKAYGALTENVTRRYTR-QILQ 117

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-TNRVVGTYG 556
           G+ YLH +    I+HRD+K +N+L D   N K+ DFG ++        G     V GT  
Sbjct: 118 GVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPY 174

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           +M+PE  S   +  K+DV+S    ++E+++ K     Y +     + + A +     +P 
Sbjct: 175 WMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA--MAAIFKIATQPTKPMLPD 232

Query: 617 QLIDAC 622
            + DAC
Sbjct: 233 GVSDAC 238

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 82.5 bits (204), Expect = 6e-17
 Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 21/206 (10%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKE---LKNEIILFSKLQHRN 444
           F I  ++G+GG+G V+     D  EI A+KR+ K     L E   +  E  + +  +   
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEW 62

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI---ICGTARGLLY 501
           LVKLL      E   L  E++P     + + +     L +   RF++             
Sbjct: 63  LVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDA---- 116

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           LH    L  IHRDLK  N L+D   + K++DFGL++           N VVG+  YMAPE
Sbjct: 117 LH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSK-----GIVTYANSVVGSPDYMAPE 168

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSG 587
                 +    D +S G +L E + G
Sbjct: 169 VLRGKGYDFTVDYWSLGCMLYEFLCG 194

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 81.1 bits (200), Expect = 8e-17
 Identities = 73/270 (27%), Positives = 113/270 (41%), Gaps = 46/270 (17%)

Query: 395 LGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHRNLVKLLGCC 452
           LG G  G VYK   L   + +AVK +   I+ +  K++ +E+ +  K     ++   G  
Sbjct: 9   LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAF 68

Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA----RGLLYLHQDSRL 508
                  +  EFM   SLD +                H++   A    +GL YL     L
Sbjct: 69  FVENRISICTEFMDGGSLDVY-----------RKIPEHVLGRIAVAVVKGLTYLWS---L 114

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF 568
           +I+HRD+K SN+L++     K+ DFG++               VGT  YMAPE  S  Q+
Sbjct: 115 KILHRDVKPSNMLVNTRGQVKLCDFGVSTQL----VNSIAKTYVGTNAYMAPERISGEQY 170

Query: 569 SVKSDVFSFGILLLEIVSGK-------KNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
            + SDV+S GI  +E+  G+       KN+G       L  I           P  L   
Sbjct: 171 GIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE-------DPPVLPVG 223

Query: 622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            F + F        +H    C+++ P++RP
Sbjct: 224 QFSEKF--------VHFITQCMRKQPKERP 245

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score = 76.2 bits (188), Expect = 8e-17
 Identities = 31/57 (54%), Positives = 36/57 (63%), Gaps = 5/57 (8%)

Query: 12  SGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPS 68
            GNLVL           LWQSFD+P+DTLLPG K G ++  G  RR+TSWKS  DPS
Sbjct: 58  DGNLVLYDNSG----KVLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 81.2 bits (200), Expect = 9e-17
 Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 24/210 (11%)

Query: 395 LGEGGFGPVYKGTL---ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLL 449
           +GEG FG V +  +     +   A+K L +  SE   ++   E+ +  KL  H N++ LL
Sbjct: 10  IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69

Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA-----RGLLYLHQ 504
           G C +     +  E+ P  +L  F+    + ++L+    F    GTA     + LL    
Sbjct: 70  GACENRGYLYIAIEYAPYGNLLDFL---RKSRVLETDPAFAKEHGTASTLTSQQLLQFAS 126

Query: 505 D--------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           D        S  + IHRDL A NVL+ +++  KI+DFGL+R   G+E             
Sbjct: 127 DVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSR---GEEVYVKKTMGRLPVR 183

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +MA E  +   ++ KSDV+SFG+LL EIVS
Sbjct: 184 WMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 81.1 bits (200), Expect = 9e-17
 Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 37/228 (16%)

Query: 393 KKLGEGGFGPVYKGTLADEQE-----------------IAVKRL-SKISEQGLKELKNEI 434
           +KLGEG FG V+   + + Q+                 +AVK L    ++    +   E+
Sbjct: 11  EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEV 70

Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI---------------FDQER 479
            + S+L+  N+++LLG C+  +   +I E+M N  L+ F+                    
Sbjct: 71  KILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAH 130

Query: 480 CKL-LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
           C   + +S   H+    A G+ YL   S L  +HRDL   N L+ +++  KI+DFG++R 
Sbjct: 131 CLPAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIKIADFGMSRN 187

Query: 539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               +      R V    +MA E    G+F+  SDV++FG+ L EI+ 
Sbjct: 188 LYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 80.7 bits (200), Expect = 1e-16
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 30/209 (14%)

Query: 393 KKLGEGGFGPVYKGTLADEQEI-AVKR----LSKISE-QGLKELKNEIILFSKLQ-HRNL 445
           K+LG+G FG VY     +  E+ A+K+         E   L+E+K+      KL  H N+
Sbjct: 5   KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKS----LRKLNEHPNI 60

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           VKL       +E   ++E+M   +L   + D++  K    S    II    +GL ++H  
Sbjct: 61  VKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKG-KPFSESVIRSIIYQILQGLAHIH-- 116

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR-----VVGTYGYMAP 560
            +    HRDLK  N+L+      KI+DFGLAR     E     +R      V T  Y AP
Sbjct: 117 -KHGFFHRDLKPENLLVSGPEVVKIADFGLAR-----EIR---SRPPYTDYVSTRWYRAP 167

Query: 561 E-YASDGQFSVKSDVFSFGILLLEIVSGK 588
           E       +S   D+++ G ++ E+ + +
Sbjct: 168 EILLRSTSYSSPVDIWALGCIMAELYTLR 196

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 80.1 bits (197), Expect = 1e-16
 Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 24/210 (11%)

Query: 395 LGEGGFGPVYKGTLADE---QEIAVKRLSK-ISEQGLKELKNEIILFSKL-QHRNLVKLL 449
           +GEG FG V K  +  +    + A+KR+ +  S+   ++   E+ +  KL  H N++ LL
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62

Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA-----RGLLYLHQ 504
           G C H     L  E+ P+ +L  F+    + ++L+    F I   TA     + LL+   
Sbjct: 63  GACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQLLHFAA 119

Query: 505 D--------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           D        S+ + IHRDL A N+L+ ++   KI+DFGL+R   G E             
Sbjct: 120 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVR 176

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +MA E  +   ++  SDV+S+G+LL EIVS
Sbjct: 177 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 79.9 bits (197), Expect = 2e-16
 Identities = 69/208 (33%), Positives = 99/208 (47%), Gaps = 28/208 (13%)

Query: 395 LGEGGFGPVY------KGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           LG+GGFG V        G L   +++  KRL K   +G +    E  + +K+  R +V L
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK--RKGYEGAMVEKRILAKVHSRFIVSL 58

Query: 449 LGCCIHGEEKL-LIYEFMPNKSLDSFIF--DQERCKLLDWSKRFH---IICGTARGLLYL 502
                  +  L L+   M    L   I+  D+E     +    F+   II G    L +L
Sbjct: 59  -AYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISG----LEHL 113

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNRVVGTYGYMAP 560
           HQ    RII+RDLK  NVLLD D N +ISD GLA     G  +T+G      GT G+MAP
Sbjct: 114 HQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG----YAGTPGFMAP 166

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSGK 588
           E     ++    D F+ G+ L E+++ +
Sbjct: 167 ELLQGEEYDFSVDYFALGVTLYEMIAAR 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 80.2 bits (198), Expect = 2e-16
 Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 21/156 (13%)

Query: 394 KLGEGGFGPVYKGTLADEQEI-AVKRLSKISE-QGLKELK-NEIILFSKLQHRNLVKLLG 450
           K+GEG +G V+K    +  EI A+KR+    + +G+      EI L  +L+H+N+V+L  
Sbjct: 7   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD 66

Query: 451 CCIHGEEKL-LIYEFMPN---KSLDSF--IFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
             +H ++KL L++E+      K  DS     D E  K    S  F ++    +GL + H 
Sbjct: 67  V-LHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVK----SFMFQLL----KGLAFCHS 117

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG 540
                ++HRDLK  N+L++++   K++DFGLARAFG
Sbjct: 118 H---NVLHRDLKPQNLLINKNGELKLADFGLARAFG 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 79.6 bits (196), Expect = 2e-16
 Identities = 78/278 (28%), Positives = 123/278 (44%), Gaps = 40/278 (14%)

Query: 387 DNFSIN--KKLGEGGFGPVYKGTLA----DEQEIAVKRL-SKISEQGLKELKNEIILFSK 439
           DN SI   + LG G FG + +G L      E  +A+  L +  S++  +    E +   +
Sbjct: 3   DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQ 62

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
             H N+V+L G    G   +++ E+M N +LDSF+   E    L   +   ++ G A G+
Sbjct: 63  FDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGM 120

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG--NTNRVVGTYGY 557
            YL   S +  +H+ L A  VL++ D+  KIS F   +    D++E    T        +
Sbjct: 121 KYL---SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQE---DKSEAIYTTMSGKSPVLW 174

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
            APE      FS  SDV+SFGI++ E++S  +              R  W      M  Q
Sbjct: 175 AAPEAIQYHHFSSASDVWSFGIVMWEVMSYGE--------------RPYWD-----MSGQ 215

Query: 618 LIDACFKDSFNLAEVIRC---IHIGLL-CVQQYPEDRP 651
            +    +D F L     C   +H  +L C Q+   +RP
Sbjct: 216 DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERP 253

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 80.6 bits (199), Expect = 2e-16
 Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 17/161 (10%)

Query: 433 EIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHII 492
           EI +   + H N+VK      H  E  ++ EFM   SL+      E+  L D +++  I+
Sbjct: 122 EIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQ-FLADVARQ--IL 178

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
            G A    YLH   R  I+HRD+K SN+L++   N KI+DFG++R     +T    N  V
Sbjct: 179 SGIA----YLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA--QTMDPCNSSV 229

Query: 553 GTYGYMAPEYA----SDGQFS-VKSDVFSFGILLLEIVSGK 588
           GT  YM+PE      + G +     D++S G+ +LE   G+
Sbjct: 230 GTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGR 270

Length = 353

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 79.2 bits (195), Expect = 2e-16
 Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 12/206 (5%)

Query: 388 NFSINKKLGEGGFGPVY--KGTLADEQEIAVKR--LSKISEQGLKELKNEIILFSKLQHR 443
            + I KK+GEG FG +Y  K   +D +   +K   L+K+  +  +  K E+IL +K++H 
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAK-SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHP 59

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+V             ++ E+     L   I +++R  L    +        + GL ++H
Sbjct: 60  NIVTFFASFQENGRLFIVMEYCDGGDLMKRI-NRQRGVLFSEDQILSWFVQISLGLKHIH 118

Query: 504 QDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
                +I+HRD+K+ N+ L ++ M  K+ DFG+AR    D  E      VGT  Y++PE 
Sbjct: 119 DR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN-DSME-LAYTCVGTPYYLSPEI 173

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
             +  ++ K+D++S G +L E+ + K
Sbjct: 174 CQNRPYNNKTDIWSLGCVLYELCTLK 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 80.7 bits (200), Expect = 2e-16
 Identities = 74/223 (33%), Positives = 109/223 (48%), Gaps = 44/223 (19%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKI-----SEQGLKELKNEIILFSKL-Q 441
           + I +KLG+G +G V+K      +E+ A+K   KI     +    +    EI+   +L  
Sbjct: 9   YEILQKLGKGAYGIVWKAIDRRTKEVVALK---KIFDAFRNATDAQRTFREIMFLQELGD 65

Query: 442 HRNLVKLLGCCIHGEEK----LLIYEFMPNKSLDSFIFDQERCKLL-DWSKRFHIICGTA 496
           H N+VKLL   +   E      L++E+M    L + I    R  +L D  KR+ I+    
Sbjct: 66  HPNIVKLLN--VIKAENDKDIYLVFEYM-ETDLHAVI----RANILEDVHKRY-IMYQLL 117

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV----V 552
           + L Y+H  S   +IHRDLK SN+LL+ D   K++DFGLAR+   +  E   N V    V
Sbjct: 118 KALKYIH--SG-NVIHRDLKPSNILLNSDCRVKLADFGLARSL-SELEENPENPVLTDYV 173

Query: 553 GTYGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
            T  Y APE       Y       V  D++S G +L E++ GK
Sbjct: 174 ATRWYRAPEILLGSTRYT----KGV--DMWSVGCILGEMLLGK 210

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 83.0 bits (205), Expect = 3e-16
 Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 21/271 (7%)

Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCI 453
           +  G  G  YKG ++ +  +  VK ++ ++        +EI    KLQH N+VKL+G C 
Sbjct: 698 ISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPS----SEIADMGKLQHPNIVKLIGLCR 753

Query: 454 HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHR 513
             +   LI+E++  K+L       E  + L W +R  I  G A+ L +LH      ++  
Sbjct: 754 SEKGAYLIHEYIEGKNL------SEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVG 807

Query: 514 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSD 573
           +L    +++D    P +    L      D     ++       Y+APE       + KSD
Sbjct: 808 NLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISS------AYVAPETRETKDITEKSD 860

Query: 574 VFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD--SFNLAE 631
           ++ FG++L+E+++GK         +  +++  A   +++      ID   +   S N  E
Sbjct: 861 IYGFGLILIELLTGKSPADAEFGVHG-SIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNE 919

Query: 632 VIRCIHIGLLCVQQYPEDRPCMPSVILMLGS 662
           ++  +++ L C    P  RPC   V+  L S
Sbjct: 920 IVEVMNLALHCTATDPTARPCANDVLKTLES 950

Length = 968

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 78.9 bits (194), Expect = 3e-16
 Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 19/212 (8%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADE-QEIAVKRL-----SKISEQGLKELKNEIILFSKLQ 441
           N+ + K LG+G FG VY    AD  +E+AVK++     S  + + +  L+ EI L   L 
Sbjct: 3   NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL 62

Query: 442 HRNLVKLLGCCIHGEEKLL--IYEFMPNKSLDSFIFDQERC--KLLDWSKRFHIICGTAR 497
           H  +V+  GC     E+ L    E MP  S    I DQ +    L +   R +       
Sbjct: 63  HERIVQYYGCLRDPMERTLSIFMEHMPGGS----IKDQLKSYGALTENVTRKYTR-QILE 117

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-TNRVVGTYG 556
           G+ YLH +    I+HRD+K +N+L D   N K+ DFG ++        G     V GT  
Sbjct: 118 GVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPY 174

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           +M+PE  S   +  K+D++S G  ++E+++ K
Sbjct: 175 WMSPEVISGEGYGRKADIWSVGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 79.3 bits (196), Expect = 5e-16
 Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 40/214 (18%)

Query: 394 KLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQG---LKELKNEIILFSKLQHRNLVKLL 449
           ++GEG +G VY+       EI A+K++   +E+    +  L+ EI L   L+H N+V+L 
Sbjct: 14  RIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLR-EITLLLNLRHPNIVELK 72

Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIF------DQERCKLLDWSKR-FH------IICGTA 496
                        E +  K LDS IF      +Q+   LLD     F       ++    
Sbjct: 73  -------------EVVVGKHLDS-IFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLL 118

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           RGL YLH++    IIHRDLK SN+LL      KI+DFGLAR + G   +  T +VV T  
Sbjct: 119 RGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTY-GLPAKPMTPKVV-TLW 173

Query: 557 YMAPE--YASDGQFSVKSDVFSFGILLLEIVSGK 588
           Y APE         +   D+++ G +L E+++ K
Sbjct: 174 YRAPELLLGCTTY-TTAIDMWAVGCILAELLAHK 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 78.8 bits (194), Expect = 5e-16
 Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 35/229 (15%)

Query: 387 DNFSINKKLGEGGFGPVY------------KGTLADEQE-----IAVKRL-SKISEQGLK 428
              +  +KLGEG FG V+            K    D        +AVK L    ++    
Sbjct: 5   KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARN 64

Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI--------FDQERC 480
           +   EI + S+L+  N+++LL  CI  +   +I E+M N  L+ F+         ++   
Sbjct: 65  DFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADV 124

Query: 481 KLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AF 539
             + +S    +    A G+ YL   S L  +HRDL   N L+ ++   KI+DFG++R  +
Sbjct: 125 VTISYSTLIFMATQIASGMKYL---SSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLY 181

Query: 540 GGD--ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            GD    +G   R V    +M+ E    G+F+  SDV++FG+ L EI++
Sbjct: 182 SGDYYRIQG---RAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 76.6 bits (189), Expect = 2e-15
 Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 15/200 (7%)

Query: 394 KLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKN----EIILFSKLQHRNLVKL 448
            +GEG +G V K       EI A+K+  K SE   +++K     E+ +  +L+H N+V L
Sbjct: 8   VVGEGAYGVVLKCRNKATGEIVAIKKF-KESEDD-EDVKKTALREVKVLRQLRHENIVNL 65

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
                      L++E++    L+     +     L        I    + + Y H     
Sbjct: 66  KEAFRRKGRLYLVFEYVERTLLELL---EASPGGLPPDAVRSYIWQLLQAIAYCH---SH 119

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YASDGQ 567
            IIHRD+K  N+L+ +    K+ DFG ARA         T+ V  T  Y APE    D  
Sbjct: 120 NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVA-TRWYRAPELLVGDTN 178

Query: 568 FSVKSDVFSFGILLLEIVSG 587
           +    DV++ G ++ E++ G
Sbjct: 179 YGKPVDVWAIGCIMAELLDG 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 76.3 bits (188), Expect = 4e-15
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)

Query: 394 KLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQGLKELKN----EIILFSKLQHRNLVKL 448
            +GEG +G V K    +  Q +A+K+  +  +   K +K     EI +  +L+H NLV L
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD--KMVKKIAMREIRMLKQLRHENLVNL 65

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
           +      +   L++EF+ +  LD     ++    LD S+    +    RG+ + H  +  
Sbjct: 66  IEVFRRKKRLYLVFEFVDHTVLDDL---EKYPNGLDESRVRKYLFQILRGIEFCHSHN-- 120

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY-ASDGQ 567
            IIHRD+K  N+L+ Q    K+ DFG AR       E  T+  V T  Y APE    D +
Sbjct: 121 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAA-PGEVYTD-YVATRWYRAPELLVGDTK 177

Query: 568 FSVKSDVFSFGILLLEIVSG 587
           +    D+++ G L+ E+++G
Sbjct: 178 YGRAVDIWAVGCLVTEMLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 76.7 bits (189), Expect = 4e-15
 Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 38/240 (15%)

Query: 388 NFSINKKLGEGGFGPV----YKGTLADEQEIAVKRLSKI------SEQGLKELKNEIILF 437
            + + K+LG+G +G V       T ++E+ +A+K+++ +      +++ L+ELK   +L 
Sbjct: 1   RYELIKELGQGAYGIVCSARNAET-SEEETVAIKKITNVFSKKILAKRALRELK---LLR 56

Query: 438 SKLQHRNLVKLLGCCI---HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--- 491
               H+N+  L    I       +L +YE +    L   I   +   L D     H    
Sbjct: 57  HFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQP--LTD----AHFQSF 110

Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTN 549
           I     GL Y+H  +   ++HRDLK  N+L++ D   KI DFGLAR F     E  G   
Sbjct: 111 IYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMT 167

Query: 550 RVVGTYGYMAPEYASDGQFSVKS-DVFSFGILLLEIVSGK---KNRGFYHSDNKLNLIRH 605
             V T  Y APE     Q   K+ DV+S G +L E++  K   K + +     +LN I  
Sbjct: 168 EYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD---QLNQILQ 224

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 77.2 bits (190), Expect = 4e-15
 Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 14/227 (6%)

Query: 360 GTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRL 419
            +  +++D + D  +P  + A    A+  +++ K L  G  G V+  T   + +  V   
Sbjct: 39  DSASESDDDDDDGLIPTKQKAREVVASLGYTVIKTLTPGSEGRVFVATKPGQPDPVV--- 95

Query: 420 SKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQER 479
            KI ++G   +  E +L   + H +++++    + G    ++   +P+ S D + +  +R
Sbjct: 96  LKIGQKGTTLI--EAMLLQNVNHPSVIRMKDTLVSGAITCMV---LPHYSSDLYTYLTKR 150

Query: 480 CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 539
            + L   +   I      GL YLH     RIIHRD+K  N+ ++      I D G A+  
Sbjct: 151 SRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQF- 206

Query: 540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                      + GT    APE  +  +++ K+D++S GI+L E+++
Sbjct: 207 --PVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLA 251

Length = 357

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 76.6 bits (189), Expect = 5e-15
 Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 39/240 (16%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQ--GLKELKNEIILFSKL 440
           +    +     +GEG +G V   T      ++A+K++S    Q    + L+ EI +  + 
Sbjct: 2   DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLR-EIKILRRF 60

Query: 441 QHRNLVKLLGCCIHG-----EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI---I 492
           +H N++ +L            +  ++ E M    L   I  Q    L +     HI   +
Sbjct: 61  KHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQ---HLSN----DHIQYFL 112

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV- 551
               RGL Y+H  +   ++HRDLK SN+LL+ + + KI DFGLAR    D    +T  + 
Sbjct: 113 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI--ADPEHDHTGFLT 167

Query: 552 --VGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGK-----KNRGFYHSDNKLNLI 603
             V T  Y APE   +   ++   D++S G +L E++S +     K+   Y   ++LNLI
Sbjct: 168 EYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD---YL--HQLNLI 222

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 75.8 bits (186), Expect = 6e-15
 Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 13/199 (6%)

Query: 394 KLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVKLLGC 451
           KLGEG +  VYKG +   +  +A+K +    E+G       E+ L   L+H N+V L   
Sbjct: 13  KLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 72

Query: 452 CIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            IH E+ L L++E++ +K L  ++ D      +   K F  +    RGL Y H   R ++
Sbjct: 73  -IHTEKSLTLVFEYL-DKDLKQYLDDCGNSINMHNVKLF--LFQLLRGLNYCH---RRKV 125

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YASDGQFS 569
           +HRDLK  N+L+++    K++DFGLARA     T+  +N VV T  Y  P+       +S
Sbjct: 126 LHRDLKPQNLLINERGELKLADFGLARA-KSIPTKTYSNEVV-TLWYRPPDILLGSTDYS 183

Query: 570 VKSDVFSFGILLLEIVSGK 588
            + D++  G +  E+ +G+
Sbjct: 184 TQIDMWGVGCIFYEMSTGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 76.3 bits (188), Expect = 6e-15
 Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 25/207 (12%)

Query: 393 KKLGEGGFGPV----YKGTLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKL-QHRN 444
           K LG+G FG V     KGT   ++  AVK L K   + +  ++    E  + +   +H  
Sbjct: 1   KVLGKGSFGKVLLAELKGT---DELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPF 57

Query: 445 LVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSK-RFHIICGTARGLLYL 502
           L +L   C   +++L  + E++    L   +F  +R    D  + RF+       GL +L
Sbjct: 58  LTQLH-SCFQTKDRLFFVMEYVNGGDL---MFHIQRSGRFDEPRARFYAAE-IVLGLQFL 112

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTNRVVGTYGYMAPE 561
           H+     II+RDLK  NVLLD + + KI+DFG+ +    G  T   T+   GT  Y+APE
Sbjct: 113 HERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT---TSTFCGTPDYIAPE 166

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGK 588
             S   +    D ++ G+LL E+++G+
Sbjct: 167 ILSYQPYGPAVDWWALGVLLYEMLAGQ 193

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 76.4 bits (188), Expect = 8e-15
 Identities = 86/294 (29%), Positives = 110/294 (37%), Gaps = 92/294 (31%)

Query: 387 DNFSINKKLGEGGFGPVYKGT---LADEQ---EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           DN    K LG G FG V + T   L  E     +AVK L   +    +E L +E+ + S 
Sbjct: 38  DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSH 97

Query: 440 L-QHRNLVKLLGC-------------CIHG------------------------------ 455
           L QH+N+V LLG              C +G                              
Sbjct: 98  LGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDY 157

Query: 456 ----EEKLLI--------------YEFMPNKSLDSFIFDQERCKL------LDWSKRFHI 491
                EK  I               E  P  S  S   D +  +       LD       
Sbjct: 158 KNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRF 217

Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET---EGNT 548
               A+G+ +L   +    IHRD+ A NVLL      KI DFGLAR    D     +GN 
Sbjct: 218 SSQVAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274

Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKK-------NRGFY 594
              V    +MAPE   D  ++V+SDV+S+GILL EI S GK        N  FY
Sbjct: 275 RLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFY 325

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 75.4 bits (185), Expect = 9e-15
 Identities = 63/200 (31%), Positives = 106/200 (53%), Gaps = 13/200 (6%)

Query: 393 KKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVKLLG 450
           +KLGEG +  V+KG +   E  +A+K +    E+G       E+ L   L+H N+V L  
Sbjct: 12  EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 71

Query: 451 CCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
             +H ++ L L++E++ +K L  ++ D      +   K F  +    RGL Y H   R +
Sbjct: 72  I-VHTDKSLTLVFEYL-DKDLKQYMDDCGNIMSMHNVKIF--LYQILRGLAYCH---RRK 124

Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YASDGQF 568
           ++HRDLK  N+L+++    K++DFGLARA     T+  +N VV T  Y  P+      ++
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLARA-KSVPTKTYSNEVV-TLWYRPPDVLLGSSEY 182

Query: 569 SVKSDVFSFGILLLEIVSGK 588
           S + D++  G +  E+ SG+
Sbjct: 183 STQIDMWGVGCIFFEMASGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 75.2 bits (185), Expect = 9e-15
 Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 33/222 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKE-----LKNEIILFSKLQ 441
           D F I  ++GEG +G VYK    D  E+    L K+     KE        EI +  +L 
Sbjct: 7   DKFDIIGQIGEGTYGQVYKARDKDTGEL--VALKKVRLDNEKEGFPITAIREIKILRQLN 64

Query: 442 HRNLVKLLGCCIHGEEKL----------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI 491
           HRN+V L       ++ L          L++E+M     D  +       L+ +S+    
Sbjct: 65  HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYM-----DHDLMGLLESGLVHFSEDH-- 117

Query: 492 ICGTAR----GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 547
           I    +    GL Y H+ + L   HRD+K SN+LL+     K++DFGLAR +  +E+   
Sbjct: 118 IKSFMKQLLEGLNYCHKKNFL---HRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPY 174

Query: 548 TNRVVGTYGYMAPE-YASDGQFSVKSDVFSFGILLLEIVSGK 588
           TN+V+ T  Y  PE    + ++    DV+S G +L E+ + K
Sbjct: 175 TNKVI-TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 75.4 bits (186), Expect = 1e-14
 Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 53/205 (25%)

Query: 389 FSINKKLGEGGFGPVYKG---TLADEQEIAVKRL--SKISEQGLKELK-NEIILFSKLQH 442
           + I   +G G +G VYK       D +E A+K+    K    G+ +    EI L  +L+H
Sbjct: 2   YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61

Query: 443 RNLVKLLGCCIHGEEKL--LIYEF-------------------MPNKSLDSFIFDQERCK 481
            N+V L+   +   +K   L++++                   +P   + S ++     +
Sbjct: 62  ENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLW-----Q 116

Query: 482 LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP----KISDFGLAR 537
           +L+             G+ YLH +    ++HRDLK +N+L+  +       KI D GLAR
Sbjct: 117 ILN-------------GVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160

Query: 538 AFGGD-ETEGNTNRVVGTYGYMAPE 561
            F    +   + + VV T  Y APE
Sbjct: 161 LFNAPLKPLADLDPVVVTIWYRAPE 185

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 74.6 bits (183), Expect = 1e-14
 Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 15/200 (7%)

Query: 395 LGEGGFGPV------YKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           LG+GGFG V        G +   +++  KRL K S + +  L+ EI+   K+    +V L
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEIL--EKVNSPFIVNL 58

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
                      L+   M    L   I++    + L+  +  H       G+L+LH    +
Sbjct: 59  AYAFESKTHLCLVMSLMNGGDLKYHIYNVGE-RGLEMERVIHYSAQITCGILHLHS---M 114

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF 568
            I++RD+K  NVLLD   N ++SD GLA      +T     +  GT GYMAPE   +  +
Sbjct: 115 DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT---ITQRAGTNGYMAPEILKEEPY 171

Query: 569 SVKSDVFSFGILLLEIVSGK 588
           S   D F+ G  + E+V+G+
Sbjct: 172 SYPVDWFAMGCSIYEMVAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 74.3 bits (182), Expect = 1e-14
 Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 12/205 (5%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISE-QGLKELKNEIILFSKLQH 442
           N  ++F + +++G G +G VYK    +  E+A  ++ K+   +    ++ EII+    +H
Sbjct: 6   NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH 65

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+V   G  +  ++  +  EF    SL            L  S+  ++   T +GL YL
Sbjct: 66  SNIVAYFGSYLRRDKLWICMEFCGGGSLQDIY---HVTGPLSESQIAYVSRETLQGLYYL 122

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H   +   +HRD+K +N+LL  + + K++DFG++       T       +GT  +MAPE 
Sbjct: 123 HSKGK---MHRDIKGANILLTDNGHVKLADFGVSAQITA--TIAKRKSFIGTPYWMAPEV 177

Query: 563 AS---DGQFSVKSDVFSFGILLLEI 584
           A+    G ++   D+++ GI  +E+
Sbjct: 178 AAVERKGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 73.9 bits (181), Expect = 2e-14
 Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 21/203 (10%)

Query: 395 LGEGGFGPV------YKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           LG+GGFG V        G +   +++  KR+ K   +G     NE  +  K+  R +V L
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGESMALNEKQILEKVNSRFVVSL 65

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH---IICGTARGLLYLHQD 505
                  +   L+   M    L   I+        +    F+   I CG    L  LHQ+
Sbjct: 66  AYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG----LEDLHQE 121

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
              RI++RDLK  N+LLD   + +ISD GLA      +T       VGT GYMAPE   +
Sbjct: 122 ---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKN 175

Query: 566 GQFSVKSDVFSFGILLLEIVSGK 588
            +++   D ++ G LL E+++G+
Sbjct: 176 ERYTFSPDWWALGCLLYEMIAGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 74.0 bits (182), Expect = 2e-14
 Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 6/92 (6%)

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           RGL YL +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  
Sbjct: 110 RGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 163

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           YM+PE      ++V+SD++S G+ L+E+  G+
Sbjct: 164 YMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 74.1 bits (182), Expect = 3e-14
 Identities = 78/243 (32%), Positives = 117/243 (48%), Gaps = 40/243 (16%)

Query: 393 KKLGEGGFGPVY---KGTLADEQEI-AVKRLSKISEQGLK-----ELKNEIILFSKLQHR 443
           K LG+G FG V+   K T  D  ++ A+K L K +   LK       K E  + +++ H 
Sbjct: 2   KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKAT---LKVRDRVRTKMERDILAEVNHP 58

Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFHIICGTAR 497
            +VKL       E KL LI +F+    L        +F +E  K          +   A 
Sbjct: 59  FIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY--------LAELAL 109

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L +LH    L II+RDLK  N+LLD++ + K++DFGL++     + E       GT  Y
Sbjct: 110 ALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEY 164

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK--LNLIRHAWKLWNEGMP 615
           MAPE  +    +  +D +SFG+L+ E+++G  +  F   D K  + +I  A KL   GMP
Sbjct: 165 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG--SLPFQGKDRKETMTMILKA-KL---GMP 218

Query: 616 SQL 618
             L
Sbjct: 219 QFL 221

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 73.2 bits (180), Expect = 3e-14
 Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 46/226 (20%)

Query: 387 DNFSINKKLGEGGFGPVYK------GTLADEQEIAVKRL-SKISEQGLKELKNEI-ILFS 438
           D+  + ++LG G +G V K      GT+     +AVKR+ + ++ Q  K L  ++ I   
Sbjct: 1   DDLEVIEELGRGAYGVVDKMRHVPTGTI-----MAVKRIRATVNSQEQKRLLMDLDISMR 55

Query: 439 KLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF------HII 492
            +     V   G      +  +  E M + SLD F       K+ D            I 
Sbjct: 56  SVDCPYTVTFYGALFREGDVWICMEVM-DTSLDKFYK-----KVYDKGLTIPEDILGKIA 109

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-TNRV 551
               + L YLH  S+L +IHRD+K SNVL++++   K+ DFG++         G   + V
Sbjct: 110 VSIVKALEYLH--SKLSVIHRDVKPSNVLINRNGQVKLCDFGIS---------GYLVDSV 158

Query: 552 V-----GTYGYMAPEY----ASDGQFSVKSDVFSFGILLLEIVSGK 588
                 G   YMAPE      +   + VKSDV+S GI ++E+ +G+
Sbjct: 159 AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGR 204

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 73.2 bits (180), Expect = 4e-14
 Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 23/210 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS---KISEQGLKELKNEIILFSKLQH 442
           D+    K +G G FG V+       E   A+K ++    I  +  + + NE  +  ++ H
Sbjct: 1   DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH 60

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFH---IICGTARG 498
             +++L     H +  L ++ E++P   L S++  +   +  + +  F+   I+C     
Sbjct: 61  PFIIRLF-WTEHDQRFLYMLMEYVPGGELFSYL--RNSGRFSNSTGLFYASEIVCA---- 113

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L YLH      I++RDLK  N+LLD++ + K++DFG A+     +    T  + GT  Y+
Sbjct: 114 LEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAK-----KLRDRTWTLCGTPEYL 165

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE       +   D ++ GIL+ E++ G 
Sbjct: 166 APEVIQSKGHNKAVDWWALGILIYEMLVGY 195

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 73.2 bits (180), Expect = 5e-14
 Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 47/195 (24%)

Query: 394 KLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQ------GLKELKNEIILFSKLQHRNLV 446
           K+G+G FG V+K      ++I A+K++   +E+       L+E+K   IL   L+H N+V
Sbjct: 19  KIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIK---IL-QLLKHENVV 74

Query: 447 KLLGCCIHGEEK---------LLIYEF--------MPNKSLDSFIFDQERCKLLDWSKRF 489
            L+  C   +            L++EF        + NK++    F     K        
Sbjct: 75  NLIEIC-RTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVK---FTLSEIK-------- 122

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-- 547
            ++     GL Y+H   R +I+HRD+KA+N+L+ +D   K++DFGLARAF   +      
Sbjct: 123 KVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNR 179

Query: 548 -TNRVVGTYGYMAPE 561
            TNRVV T  Y  PE
Sbjct: 180 YTNRVV-TLWYRPPE 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 72.2 bits (177), Expect = 6e-14
 Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 22/208 (10%)

Query: 393 KKLGEGGFGPVYKG---TLADEQEIAVKRL---SKISEQGLKELKNEIILFSKLQHRNLV 446
            ++G G FG V  G       +  + VK L   +   EQ L     E+  + +L H N++
Sbjct: 1   DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLL--FLQEVQPYRELNHPNVL 58

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF--HIICGTARGLLYLHQ 504
           + LG CI     LL+ EF P   L +++            K     + C  A GLL+LHQ
Sbjct: 59  QCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ 118

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTNRVVGTYGYMAPEYA 563
                 IH DL   N  L  D++ KI D+GLA   +  D         V    ++APE  
Sbjct: 119 ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAV-PLRWLAPELV 174

Query: 564 SDGQFSV-------KSDVFSFGILLLEI 584
                 +       KS+++S G+ + E+
Sbjct: 175 EIRGQDLLPKDQTKKSNIWSLGVTMWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 73.2 bits (180), Expect = 6e-14
 Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 32/208 (15%)

Query: 395 LGEGGFGPV----YKGTLADEQEIAVKRLSK---ISEQGLKELKNEIILF---SKLQHRN 444
           LG G FG V    YK T    +  A+K L K   I+   ++ L  E  +F   +  +H  
Sbjct: 7   LGRGHFGKVLLAEYKKT---GELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPF 63

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFI----FDQERCKLLDWSKRFHIICGTARGLL 500
           LV L  C    +    + E+     L   I    F + R         F+  C    GL 
Sbjct: 64  LVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAV-------FYAAC-VVLGLQ 115

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTNRVVGTYGYMA 559
           YLH++   +I++RDLK  N+LLD +   KI+DFGL +   G  +    T+   GT  ++A
Sbjct: 116 YLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDR---TSTFCGTPEFLA 169

Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE  ++  ++   D +  G+L+ E++ G
Sbjct: 170 PEVLTETSYTRAVDWWGLGVLIYEMLVG 197

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 72.1 bits (177), Expect = 7e-14
 Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 27/205 (13%)

Query: 393 KKLGEGGFGPVY---KGTLADEQEI-AVKRLSKISEQGLKELKNE-IILFSKLQHRNLVK 447
           K + +G FG VY   K +  D   I  +K+   I++  +  +K E  I+  + +   + K
Sbjct: 2   KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK 61

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLL-----DWSKRFHIICGTARGLLYL 502
           L       +   L+ E++      S I      K L     DW+K++  I     G+  L
Sbjct: 62  LYYSFQSKDYLYLVMEYLNGGDCASLI------KTLGGLPEDWAKQY--IAEVVLGVEDL 113

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           HQ     IIHRD+K  N+L+DQ  + K++DFGL+R   G E +    + VGT  Y+APE 
Sbjct: 114 HQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRN--GLENK----KFVGTPDYLAPET 164

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                    SD +S G ++ E + G
Sbjct: 165 ILGVGDDKMSDWWSLGCVIFEFLFG 189

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 72.0 bits (176), Expect = 7e-14
 Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 18/208 (8%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG--LKELKNEIILFSKLQ 441
           N   ++ + +++G G +G VYK       E+A  ++ K+ E G     ++ EI +  + +
Sbjct: 6   NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKL-EPGDDFSLIQQEIFMVKECK 64

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSL-DSFIFDQERCKLLDWSKRFHIIC-GTARGL 499
           H N+V   G  +  E+  +  E+    SL D +       +L     +   +C  T +GL
Sbjct: 65  HCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSEL-----QIAYVCRETLQGL 119

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH   ++   HRD+K +N+LL  + + K++DFG+A       T       +GT  +MA
Sbjct: 120 AYLHSKGKM---HRDIKGANILLTDNGDVKLADFGVAAKITA--TIAKRKSFIGTPYWMA 174

Query: 560 PEYAS---DGQFSVKSDVFSFGILLLEI 584
           PE A+   +G ++   D+++ GI  +E+
Sbjct: 175 PEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 71.8 bits (176), Expect = 9e-14
 Identities = 72/221 (32%), Positives = 99/221 (44%), Gaps = 45/221 (20%)

Query: 389 FSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELK------NEIILFSKLQ 441
           F   + LG+GGFG V    + A  +  A K+L K   + +K+ K      NE  +  K+ 
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEK---KRIKKRKGEAMALNEKQILEKVN 58

Query: 442 HRNLVKLL-------GCCI------HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
            R +V L          C+       G+ K  IY            FD+ER         
Sbjct: 59  SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPG------FDEERAVFY----A 108

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
             I CG    L  LH   R RI++RDLK  N+LLD   + +ISD GLA        EG T
Sbjct: 109 AEITCG----LEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEI----PEGET 157

Query: 549 NR-VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            R  VGT GYMAPE   + +++   D +  G L+ E++ GK
Sbjct: 158 IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 72.6 bits (178), Expect = 1e-13
 Identities = 78/269 (28%), Positives = 108/269 (40%), Gaps = 74/269 (27%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE------IAVKRL---SKISEQGLKELKNEI-IL 436
           D   + K LG G FG V + +    ++      +AVK L   +  SE   K L  E+ IL
Sbjct: 7   DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEY--KALMTELKIL 64

Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLI------------------YEFMPNKS--------- 469
                H N+V LLG C      L++                    F P ++         
Sbjct: 65  IHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMK 124

Query: 470 --------LDS-----------FIFD------QERCKLLDWSKRF----HIICGT---AR 497
                   LDS           FI D      +E  +  +  K       +I  +   AR
Sbjct: 125 QKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVAR 184

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ +L   SR + IHRDL A N+LL ++   KI DFGLAR    D              +
Sbjct: 185 GMEFL--ASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MAPE   D  ++ +SDV+SFG+LL EI S
Sbjct: 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFS 270

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 72.8 bits (179), Expect = 1e-13
 Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 32/192 (16%)

Query: 411 EQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK 468
            Q +A+K+LS+   +    K    E++L   + H+N++ LL              F P K
Sbjct: 41  GQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNV------------FTPQK 88

Query: 469 SLDSF--------IFDQERCK----LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLK 516
           SL+ F        + D   C+     LD  +  +++     G+ +LH      IIHRDLK
Sbjct: 89  SLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLK 145

Query: 517 ASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFS 576
            SN+++  D   KI DFGLAR  G       T  VV  Y Y APE      +    D++S
Sbjct: 146 PSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWS 202

Query: 577 FGILLLEIVSGK 588
            G ++ E++ G 
Sbjct: 203 VGCIMGEMIRGT 214

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains

 Score = 66.4 bits (162), Expect = 1e-13
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 222 SREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLE-NSSCMAYTNSDIRGGGSGCAMW 280
             +D F++    KLP  +   +S   +L+EC  KCL  N SC ++T ++   G  GC +W
Sbjct: 1   KSDDCFVRLPNTKLPGFSRIVIS-VASLEECASKCLNSNCSCRSFTYNN---GTKGCLLW 56

Query: 281 -FGELIDMRDFPDGGQDLYIR 300
               L D R FP GG DLY +
Sbjct: 57  SESSLGDARLFPSGGVDLYEK 77

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 72.8 bits (178), Expect = 1e-13
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)

Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 189

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E++ G 
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 72.0 bits (176), Expect = 1e-13
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V K        I  ++L  +  +    ++N+II   ++ H    
Sbjct: 5   DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNS 62

Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  + + +R       K   +     RGL YL
Sbjct: 63  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK---VSIAVLRGLAYL 119

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 120 RE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 173

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 174 LQGTHYSVQSDIWSMGLSLVELAIGR 199

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 71.7 bits (176), Expect = 2e-13
 Identities = 69/212 (32%), Positives = 102/212 (48%), Gaps = 35/212 (16%)

Query: 393 KKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKNEIILFSK------LQHRNL 445
           K LG+G FG V    L    E  A+K L K  +  L++   E  +  +       +H  L
Sbjct: 1   KVLGKGSFGKVMLAELKGTNEFFAIKALKK--DVVLEDDDVECTMVERRVLALAWEHPFL 58

Query: 446 VKLLGCCIHGEEKLL-IYEFMPNKSL-----DSFIFDQERCKLLDWSKRFH---IICGTA 496
             L  C    +E L  + E++    L      S  FD+ R        RF+   IICG  
Sbjct: 59  THLF-CTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARA-------RFYAAEIICG-- 108

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
             L +LH+     II+RDLK  NVLLD+D + KI+DFG+ +     E + +T    GT  
Sbjct: 109 --LQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST--FCGTPD 161

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           Y+APE     +++   D +SFG+LL E++ G+
Sbjct: 162 YIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 71.9 bits (177), Expect = 2e-13
 Identities = 62/214 (28%), Positives = 95/214 (44%), Gaps = 43/214 (20%)

Query: 395 LGEGGFGPVYKGTLAD-EQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGC 451
           +G G +G V         +++A+K+LS+   S    K    E+ L   + H N++ LL  
Sbjct: 23  VGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDV 82

Query: 452 CIHGEEKLLIYEFMPNKSLDSF----------------IFDQERCKLLDWSKRFHIICGT 495
                       F P  SL+ F                I   +  KL D   +F ++   
Sbjct: 83  ------------FTPASSLEDFQDVYLVTHLMGADLNNIVKCQ--KLSDDHIQF-LVYQI 127

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
            RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR      T+      V T 
Sbjct: 128 LRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLAR-----HTDDEMTGYVATR 179

Query: 556 GYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
            Y APE   +   ++   D++S G ++ E+++GK
Sbjct: 180 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 71.3 bits (175), Expect = 2e-13
 Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 41/214 (19%)

Query: 395 LGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN-----EIILFSKLQHR--NLV 446
           +G G  G VYK         +AVK++ +   +  +E K      +++L S   H    +V
Sbjct: 23  IGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKS---HDCPYIV 77

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF-------HIICGTARGL 499
           K  G  I   +  +  E M      S   D    KLL   +          +     + L
Sbjct: 78  KCYGYFITDSDVFICMELM------STCLD----KLLKRIQGPIPEDILGKMTVAIVKAL 127

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN-RVVGTYGYM 558
            YL +     +IHRD+K SN+LLD   N K+ DFG++    G   +     R  G   YM
Sbjct: 128 HYLKEKHG--VIHRDVKPSNILLDASGNVKLCDFGIS----GRLVDSKAKTRSAGCAAYM 181

Query: 559 APEY----ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE       + ++ +++DV+S GI L+E+ +G+
Sbjct: 182 APERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 71.2 bits (174), Expect = 2e-13
 Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 19/208 (9%)

Query: 389 FSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRN 444
           F   + LG+GGFG V    + A  +  A KRL K      +G     NE  +  K+  + 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH---IICGTARGLLY 501
           +V L       +   L+   M    L   I++       +    F+   I+CG    L  
Sbjct: 62  VVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG----LED 117

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA-RAFGGDETEGNTNRVVGTYGYMAP 560
           LH+++    ++RDLK  N+LLD   + +ISD GLA +   G+   G     VGT GYMAP
Sbjct: 118 LHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR----VGTVGYMAP 170

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSGK 588
           E  ++ ++++  D +  G L+ E++ G+
Sbjct: 171 EVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 41/215 (19%)

Query: 393 KKLGEGGFGPVYKGTLA----DEQEIAVKRL--SKISEQGLKELKNEIILFSKLQHRNLV 446
           KK+GEG FG   K  L     D ++  +K +  SK+S +  +E + E+ + S ++H N+V
Sbjct: 6   KKIGEGSFG---KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIV 62

Query: 447 KL------LGC-------CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
           +        G        C  G+    +Y+ +  +    F  DQ    +LDW   F  IC
Sbjct: 63  QYQESFEENGNLYIVMDYCEGGD----LYKKINAQRGVLFPEDQ----ILDW---FVQIC 111

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
                L ++H     +I+HRD+K+ N+ L +D   K+ DFG+AR          T   +G
Sbjct: 112 ---LALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART--CIG 163

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  Y++PE   +  ++ KSD+++ G +L E+ + K
Sbjct: 164 TPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLK 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 70.9 bits (174), Expect = 2e-13
 Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 39/211 (18%)

Query: 394 KLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVKLLGC 451
           KLGEG +  VYKG +    Q +A+K +    E+G       E  L   L+H N+V  L  
Sbjct: 12  KLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIV-TLHD 70

Query: 452 CIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKR-----------FHIICGTARGL 499
            IH ++ L L++E++          D +  + +D               F ++    RGL
Sbjct: 71  IIHTKKTLTLVFEYL----------DTDLKQYMDDCGGGLSMHNVRLFLFQLL----RGL 116

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            Y HQ    R++HRDLK  N+L+ +    K++DFGLARA     ++  +N VV T  Y  
Sbjct: 117 AYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARA-KSVPSKTYSNEVV-TLWYRP 171

Query: 560 PEY---ASDGQFSVKSDVFSFGILLLEIVSG 587
           P+    +++  +S   D++  G +  E+ +G
Sbjct: 172 PDVLLGSTE--YSTSLDMWGVGCIFYEMATG 200

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 70.0 bits (171), Expect = 3e-13
 Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 34/273 (12%)

Query: 393 KKLGEGGFGPVYKGTL----ADEQEIAVKRLS--KISEQGLKELKNEIILFSKLQHRNLV 446
           + +G+G +G V   +L     D ++  +K+L+    S +  K  + E  L S+L+H N+V
Sbjct: 6   RVVGKGSYGEV---SLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIV 62

Query: 447 KLLGCCIHGEEKLL--IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
                   GE+ LL  +  F     L   +  +++ KLL  ++        A  L YLH+
Sbjct: 63  AYRESW-EGEDGLLYIVMGFCEGGDLYHKL-KEQKGKLLPENQVVEWFVQIAMALQYLHE 120

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS 564
                I+HRDLK  NV L +    K+ D G+AR         +T  ++GT  YM+PE  S
Sbjct: 121 K---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAST--LIGTPYYMSPELFS 175

Query: 565 DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK 624
           +  ++ KSDV++ G  + E+ + K      H+ N  ++    +++    +P    D    
Sbjct: 176 NKPYNYKSDVWALGCCVYEMATLK------HAFNAKDMNSLVYRIIEGKLPPMPKDY--- 226

Query: 625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
            S  L E+I      +L  +  PE RP + S++
Sbjct: 227 -SPELGELIA----TMLSKR--PEKRPSVKSIL 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 71.1 bits (174), Expect = 3e-13
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 15/199 (7%)

Query: 395 LGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLK-ELKNEIILFSKLQHRNLVKLL 449
           LG+G FG V    L +   + AVK L K   + +  ++  +  + IL     H  L +L 
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLY 62

Query: 450 GCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
            CC    ++L  + EF+    L   +F  ++ +  D ++           L++LH     
Sbjct: 63  -CCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEITSALMFLHDKG-- 116

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF 568
            II+RDLK  NVLLD + + K++DFG+ +   G      T+   GT  Y+APE   +  +
Sbjct: 117 -IIYRDLKLDNVLLDHEGHCKLADFGMCKE--GIFNGKTTSTFCGTPDYIAPEILQEMLY 173

Query: 569 SVKSDVFSFGILLLEIVSG 587
               D ++ G+LL E++ G
Sbjct: 174 GPSVDWWAMGVLLYEMLCG 192

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 70.4 bits (172), Expect = 4e-13
 Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 17/202 (8%)

Query: 393 KKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVKLLG 450
           +KLGEG +  VYKG +  + Q +A+K +S  +E+G+      E  L   L+H N+V LL 
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIV-LLH 69

Query: 451 CCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
             IH +E L  ++E+M +  L  ++  Q    L  ++ R  +     RGL Y+H      
Sbjct: 70  DIIHTKETLTFVFEYM-HTDLAQYMI-QHPGGLHPYNVRLFMF-QLLRGLAYIH---GQH 123

Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY---ASDG 566
           I+HRDLK  N+L+      K++DFGLARA     ++  ++ VV T  Y  P+    A+D 
Sbjct: 124 ILHRDLKPQNLLISYLGELKLADFGLARA-KSIPSQTYSSEVV-TLWYRPPDVLLGATD- 180

Query: 567 QFSVKSDVFSFGILLLEIVSGK 588
            +S   D++  G + +E++ G+
Sbjct: 181 -YSSALDIWGAGCIFIEMLQGQ 201

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 70.1 bits (171), Expect = 4e-13
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 15/200 (7%)

Query: 394 KLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVKLLGC 451
           KLGEG +  V+KG +   E  +A+K +    E+G       E+ L   L+H N+V L   
Sbjct: 12  KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDI 71

Query: 452 CIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI-ICGTARGLLYLHQDSRLR 509
            IH E  L L++E++ +  L  ++   + C  L       I +    RGL Y H   + +
Sbjct: 72  -IHTERCLTLVFEYLDS-DLKQYL---DNCGNLMSMHNVKIFMFQLLRGLSYCH---KRK 123

Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YASDGQF 568
           I+HRDLK  N+L+++    K++DFGLARA     T+  +N VV T  Y  P+      ++
Sbjct: 124 ILHRDLKPQNLLINEKGELKLADFGLARA-KSVPTKTYSNEVV-TLWYRPPDVLLGSTEY 181

Query: 569 SVKSDVFSFGILLLEIVSGK 588
           S   D++  G +L E+ +G+
Sbjct: 182 STPIDMWGVGCILYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 70.6 bits (173), Expect = 4e-13
 Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 32/222 (14%)

Query: 379 LATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK------ISEQGLKELK 431
             T+   T+ +   + +G G FG V         Q +A+K++ K      ++++  +ELK
Sbjct: 2   FGTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELK 61

Query: 432 NEIILFSKLQHRNLVKLLGCCIHGEEKL-LIYEFMP---NKSLDSFIFDQERCKLLDWSK 487
               L   L+H N++ L    I   E +  + E +    ++ L S   +++  +      
Sbjct: 62  ----LLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSRPLEKQFIQYF---- 113

Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 547
            + I+    RGL Y+H      ++HRDLK SN+L++++ + KI DFGLAR       +  
Sbjct: 114 LYQIL----RGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI-----QDPQ 161

Query: 548 TNRVVGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGK 588
               V T  Y APE     Q + V+ D++S G +  E++ GK
Sbjct: 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 70.6 bits (173), Expect = 5e-13
 Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 53/235 (22%)

Query: 391 INKKLGEGGFGPVYKG-TLADEQEIAVKR--LSKISEQGLKELKN------------EII 435
               LGEG +G V K       + +A+K+  + +IS    K+ +             E+ 
Sbjct: 13  KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELK 72

Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN---KSLDSFIF---DQERCKLLDWSKRF 489
           + ++++H N++ L+   + G+   L+ + M +   K +D  I     Q +C LL      
Sbjct: 73  IMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILL------ 126

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD------- 542
            I+     GL  LH+      +HRDL  +N+ ++     KI+DFGLAR +G         
Sbjct: 127 QIL----NGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLS 179

Query: 543 ------ETEGNTNRVVGTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
                   E  T++VV T  Y APE    A    F+V  D++S G +  E+++GK
Sbjct: 180 KDETMQRREEMTSKVV-TLWYRAPELLMGAEKYHFAV--DMWSVGCIFAELLTGK 231

Length = 335

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 69.4 bits (170), Expect = 7e-13
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 18/211 (8%)

Query: 388 NFSINKKLGEGGFGPVY---KGTLADEQEI-AVKRLSKIS----EQGLKELKNEIILFSK 439
           NF + + LG G +G V+   K    D  ++ A+K L K +     +  +  + E  +   
Sbjct: 1   NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEA 60

Query: 440 LQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           ++    +  L      + KL LI +++    L + ++ +E     +   R +I    A  
Sbjct: 61  VRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESE--VRVYI----AEI 114

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           +L L    +L II+RD+K  N+LLD + +  ++DFGL++ F  +E E       GT  YM
Sbjct: 115 VLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYM 173

Query: 559 APEY--ASDGQFSVKSDVFSFGILLLEIVSG 587
           APE      G      D +S G+L  E+++G
Sbjct: 174 APEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 69.6 bits (170), Expect = 8e-13
 Identities = 69/218 (31%), Positives = 106/218 (48%), Gaps = 28/218 (12%)

Query: 393 KKLGEGGFGPVYKGTLADEQE-IAVKRLSK----ISEQGLKELKNEIILFSKLQHRNLVK 447
           K LG+G FG V    L  + E  AVK L K    I +     +  + +L    ++  L  
Sbjct: 1   KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTH 60

Query: 448 LLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFH---IICGTARGLLYLH 503
           L  C    +E L  + EF+    L   I D+ R  L  +   F+   I+CG    L +LH
Sbjct: 61  LY-CTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDL--YRATFYAAEIVCG----LQFLH 113

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGNTNRVVGTYGYMAPE 561
                 II+RDLK  NV+LD+D + KI+DFG+ +   FG    +   +   GT  Y+APE
Sbjct: 114 SKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG----DNRASTFCGTPDYIAPE 166

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
                +++   D +SFG+LL E++ G+     +H D++
Sbjct: 167 ILQGLKYTFSVDWWSFGVLLYEMLIGQSP---FHGDDE 201

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 70.1 bits (171), Expect = 8e-13
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)

Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 23  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 81  LLNV------------FTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 128

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 129 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 182

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 69.7 bits (170), Expect = 9e-13
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)

Query: 381 TIANATDNFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 11  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 70

Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 71  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 118

Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 119 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 173

Query: 544 TEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 174 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 68.1 bits (166), Expect = 1e-12
 Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 24/211 (11%)

Query: 388 NFSINKKLGEGGFG-PVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRN 444
            +++ + +GEG FG  +    +  +Q+ A+K  RL K S   +++ + E +L +K++H N
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPN 59

Query: 445 LVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKL------LDWSKRFHIICGTAR 497
           +V         +  L ++ E+     L   I  Q R KL      L W   F  +C    
Sbjct: 60  IVAFKES-FEADGHLYIVMEYCDGGDLMQKIKLQ-RGKLFPEDTILQW---FVQMC---L 111

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ ++H+    R++HRD+K+ N+ L Q+   K+ DFG AR          T   VGT  Y
Sbjct: 112 GVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT--YVGTPYY 166

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE   +  ++ KSD++S G +L E+ + K
Sbjct: 167 VPPEIWENMPYNNKSDIWSLGCILYELCTLK 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 68.9 bits (168), Expect = 2e-12
 Identities = 77/276 (27%), Positives = 110/276 (39%), Gaps = 82/276 (29%)

Query: 387 DNFSINKKLGEGGFGPVYKGT------LADEQEIAVKRLSKISEQG-----LKELKNEII 435
           D   + K LG G FG V +         A  + +AVK L + +        + ELK   I
Sbjct: 7   DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---I 63

Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIY------------------EFMPNKS-------- 469
           L     H N+V LLG C      L++                   EF+P K+        
Sbjct: 64  LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQG 123

Query: 470 --------------LDS-----------FIFDQERCKLL-------DWSKRF----HIIC 493
                         LDS           F+ ++    +        D  K+      +IC
Sbjct: 124 KSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLIC 183

Query: 494 GT---ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
            +   A+G+ +L   SR + IHRDL A N+LL ++   KI DFGLAR    D        
Sbjct: 184 YSFQVAKGMEFLA--SR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240

Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                 +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 68.4 bits (168), Expect = 2e-12
 Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 42/222 (18%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQG----LKELKNEIILFSKLQ 441
           D +    ++ EG +G VY+       EI A+K+L K+ ++     +  L+ EI +  KLQ
Sbjct: 5   DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKL-KMEKEKEGFPITSLR-EINILLKLQ 62

Query: 442 HRNLVKL----LGCCIHGEEKLLIYEFMPN--KSL-----DSFIFDQERC---KLLDWSK 487
           H N+V +    +G  +   +  ++ E++ +  KSL       F+  + +C   +LL    
Sbjct: 63  HPNIVTVKEVVVGSNLD--KIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLL---- 116

Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 547
                     G+ +LH +    I+HRDLK SN+LL+     KI DFGLAR +G       
Sbjct: 117 ---------SGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYG--SPLKP 162

Query: 548 TNRVVGTYGYMAPE-YASDGQFSVKSDVFSFGILLLEIVSGK 588
             ++V T  Y APE      ++S   D++S G +  E+++ K
Sbjct: 163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK 204

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 31/208 (14%)

Query: 395 LGEGGFGPV------YKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           LG+GGFG V        G +   +++  KR+ K   +G     NE  +  K+  R +V L
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKRILEKVNSRFVVSL 65

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFI-------FDQERCKLLDWSKRFHIICGTARGLLY 501
                  +   L+   M    L   I       FD++R           + CG       
Sbjct: 66  AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFY----AAELCCG------- 114

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR-VVGTYGYMAP 560
           L    R RI++RDLK  N+LLD   + +ISD GLA        EG T R  VGT GYMAP
Sbjct: 115 LEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQI----PEGETVRGRVGTVGYMAP 170

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSGK 588
           E  ++ +++   D +  G L+ E++ G+
Sbjct: 171 EVINNEKYTFSPDWWGLGCLIYEMIQGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 68.9 bits (168), Expect = 2e-12
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V+K +      I  ++L  +  +    ++N+II   ++ H    
Sbjct: 5   DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNS 62

Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R       K   +     +GL YL
Sbjct: 63  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 119

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 120 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 173

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 174 LQGTHYSVQSDIWSMGLSLVEMAIGR 199

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 25/207 (12%)

Query: 393 KKLGEGGFGPVYKGTL-ADEQEIAVKRLSK----ISEQGLKELKNEIILFSKLQHRNLVK 447
           K LG+G FG V+   L    Q  A+K L K    + +     +  + +L    +H  L  
Sbjct: 1   KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60

Query: 448 LLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSK-RFH---IICGTARGLLYL 502
           L  C    +E L  + E++    L   +F  + C   D  +  F+   IICG    L +L
Sbjct: 61  LY-CTFQTKENLFFVMEYLNGGDL---MFHIQSCHKFDLPRATFYAAEIICG----LQFL 112

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTNRVVGTYGYMAPE 561
           H      I++RDLK  N+LLD D + KI+DFG+ +    GD     T    GT  Y+APE
Sbjct: 113 HSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD---AKTCTFCGTPDYIAPE 166

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGK 588
                +++   D +SFG+LL E++ G+
Sbjct: 167 ILLGQKYNTSVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 32/188 (17%)

Query: 414 IAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLD 471
           +AVK+LS+   ++   K    E++L   + H+N++ LL              F P KSL+
Sbjct: 49  VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV------------FTPQKSLE 96

Query: 472 SF--------IFDQERCKL----LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASN 519
            F        + D   C++    LD  +  +++     G+ +LH      IIHRDLK SN
Sbjct: 97  EFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 153

Query: 520 VLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGI 579
           +++  D   KI DFGLAR    +     T  VV  Y Y APE      +    D++S G 
Sbjct: 154 IVVKSDCTLKILDFGLARTACTNFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGC 210

Query: 580 LLLEIVSG 587
           ++ E+V G
Sbjct: 211 IMGELVKG 218

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 67.8 bits (166), Expect = 4e-12
 Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 28/210 (13%)

Query: 393 KKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN--EIILFSKLQHRNLVKLL 449
           K +G G +G V     ++  E +A+K+++   +  +   +   EI L   L H N++ + 
Sbjct: 11  KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIK 70

Query: 450 GCC--IHGE---EKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTARGL 499
                 H E   +  ++YE M +  L   I        + C+       + ++    RGL
Sbjct: 71  DIMPPPHREAFNDVYIVYELM-DTDLHQIIRSSQTLSDDHCQYF----LYQLL----RGL 121

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            Y+H  +   ++HRDLK SN+LL+ + + KI DFGLAR     E        V T  Y A
Sbjct: 122 KYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLART--TSEKGDFMTEYVVTRWYRA 176

Query: 560 PE-YASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE   +  +++   DV+S G +  E++  K
Sbjct: 177 PELLLNCSEYTTAIDVWSVGCIFAELLGRK 206

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 67.1 bits (164), Expect = 4e-12
 Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 60/262 (22%)

Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKR-LSKISEQGLKELK-NEIILFSKLQHR 443
           D +   +K+GEG +G VYK       + +A+K+   ++ E+G+      EI L   L   
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES 60

Query: 444 N-LVKLLGCCIHGEEKL------LIYEF-------------------MPNKSLDSFIFDQ 477
             +V+LL    H EEK       L++E+                   +P K++ SF++  
Sbjct: 61  IYIVRLL-DVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMY-- 117

Query: 478 ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLA 536
           +  K                G+ + H   +  ++HRDLK  N+L+D+     KI+D GL 
Sbjct: 118 QLLK----------------GVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158

Query: 537 RAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYH 595
           RAF     +  T+ +V T  Y APE       +S   D++S G +  E+   +     + 
Sbjct: 159 RAF-SIPVKSYTHEIV-TLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQP---LFP 213

Query: 596 SDNKLNLIRHAWKLWNEGMPSQ 617
            D++L  + H +KL   G P++
Sbjct: 214 GDSELQQLLHIFKLL--GTPTE 233

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 67.8 bits (165), Expect = 4e-12
 Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 39/212 (18%)

Query: 395 LGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGL--KELKNEIILFSKLQHRNLVKLLGC 451
           +G G +G V         Q++AVK+LS+  +  +  +    E+ L   ++H N++ LL  
Sbjct: 23  VGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDV 82

Query: 452 CIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLLDWSKRFHIICGTAR 497
                       F P  S+++F             + +  +C KL D   +F +I    R
Sbjct: 83  ------------FTPATSIENFNEVYLVTNLMGADLNNIVKCQKLSDEHVQF-LIYQLLR 129

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           GL Y+H      IIHRDLK SNV +++D   +I DFGLAR    DE  G     V T  Y
Sbjct: 130 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQ-ADDEMTG----YVATRWY 181

Query: 558 MAPEYASDG-QFSVKSDVFSFGILLLEIVSGK 588
            APE   +   ++   D++S G ++ E++ GK
Sbjct: 182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 67.6 bits (165), Expect = 5e-12
 Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 17/203 (8%)

Query: 393 KKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLK-ELKNEIILFSKLQHRNLVK 447
           K LG+G FG V    L    E+ A+K L K   + +  +   +  + IL    +H  L  
Sbjct: 1   KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60

Query: 448 LLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSK-RFHIICGTARGLLYLHQD 505
           L  CC   +++L  + E++    L   +F  +R +  D  + RF+    T   L++LH+ 
Sbjct: 61  LH-CCFQTKDRLFFVMEYVNGGDL---MFQIQRSRKFDEPRSRFYAAEVTL-ALMFLHRH 115

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
               +I+RDLK  N+LLD + + K++DFG+ +   G      T    GT  Y+APE   +
Sbjct: 116 G---VIYRDLKLDNILLDAEGHCKLADFGMCKE--GILNGVTTTTFCGTPDYIAPEILQE 170

Query: 566 GQFSVKSDVFSFGILLLEIVSGK 588
            ++    D ++ G+L+ E+++G+
Sbjct: 171 LEYGPSVDWWALGVLMYEMMAGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 67.0 bits (163), Expect = 5e-12
 Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 13/205 (6%)

Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRN 444
           D++   +KLGEG +  VYKG +  + + +A+K +    E+G       E  L   L+H N
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHAN 64

Query: 445 LVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           +V LL   IH +E L L++E++ +  L  ++         +  K F  +    RGL Y+H
Sbjct: 65  IV-LLHDIIHTKETLTLVFEYV-HTDLCQYMDKHPGGLHPENVKLF--LFQLLRGLSYIH 120

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-Y 562
           Q     I+HRDLK  N+L+      K++DFGLARA     +   +N VV T  Y  P+  
Sbjct: 121 QRY---ILHRDLKPQNLLISDTGELKLADFGLARA-KSVPSHTYSNEVV-TLWYRPPDVL 175

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
               ++S   D++  G + +E++ G
Sbjct: 176 LGSTEYSTCLDMWGVGCIFVEMIQG 200

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 67.1 bits (164), Expect = 6e-12
 Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 9/95 (9%)

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA--FGGDETEGNTNRVVG 553
           A GL +LH      II+RDLK  NV+LD + + KI+DFG+ +   FGG      T    G
Sbjct: 111 AIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK----TTRTFCG 163

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  Y+APE  +   +    D ++FG+LL E+++G+
Sbjct: 164 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 66.6 bits (163), Expect = 6e-12
 Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 12/198 (6%)

Query: 394 KLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGL--KELKNEIILFSKLQHRNLVKLLG 450
           K+GEG +G V+K    +  +I A+K+  +  +  +  K    EI +  +L+H NLV L+ 
Sbjct: 8   KIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIE 67

Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                 +  L++E+  +  L+     ++  + +       II  T + + + H+      
Sbjct: 68  VFRRKRKLHLVFEYCDHTVLNEL---EKNPRGVPEHLIKKIIWQTLQAVNFCHK---HNC 121

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY-ASDGQFS 569
           IHRD+K  N+L+ +    K+ DFG AR   G     +    V T  Y APE    D Q+ 
Sbjct: 122 IHRDVKPENILITKQGQIKLCDFGFARILTG--PGDDYTDYVATRWYRAPELLVGDTQYG 179

Query: 570 VKSDVFSFGILLLEIVSG 587
              DV++ G +  E+++G
Sbjct: 180 PPVDVWAIGCVFAELLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 66.6 bits (162), Expect = 6e-12
 Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 24/204 (11%)

Query: 395 LGEGGFGPVYKGTLADEQEI-AVKRLSKIS---EQGLKELKNEIILFSKLQHRN--LVKL 448
           +G GGFG VY    AD  ++ A+K L K     +QG     NE I+ S +   +   +  
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 449 LGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFH---IICGTARGLLYLHQ 504
           +    H  +KL  I + M    L   +   +     +   RF+   II G        H 
Sbjct: 62  MTYAFHTPDKLCFILDLMNGGDLHYHL--SQHGVFSEKEMRFYATEIILGLE------HM 113

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS 564
            +R  +++RDLK +N+LLD+  + +ISD GLA  F   +   +    VGT+GYMAPE   
Sbjct: 114 HNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQ 168

Query: 565 DGQ-FSVKSDVFSFGILLLEIVSG 587
            G  +   +D FS G +L +++ G
Sbjct: 169 KGTAYDSSADWFSLGCMLFKLLRG 192

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 66.5 bits (162), Expect = 6e-12
 Identities = 67/210 (31%), Positives = 94/210 (44%), Gaps = 36/210 (17%)

Query: 395 LGEGGFGPVYKGTLADEQEI-AVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLG 450
           +G GGFG VY    AD  ++ A+K L K     +QG     NE I+ S      LV    
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS------LVSTGD 55

Query: 451 C----CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL---- 502
           C    C       + Y F     L SFI D      L +    H +   A    Y     
Sbjct: 56  CPFIVC-------MSYAFHTPDKL-SFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEII 107

Query: 503 ----HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
               H  +R  +++RDLK +N+LLD+  + +ISD GLA  F   +   +    VGT+GYM
Sbjct: 108 LGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 162

Query: 559 APEYASDG-QFSVKSDVFSFGILLLEIVSG 587
           APE    G  +   +D FS G +L +++ G
Sbjct: 163 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 192

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 66.9 bits (163), Expect = 7e-12
 Identities = 63/200 (31%), Positives = 93/200 (46%), Gaps = 13/200 (6%)

Query: 393 KKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEI----ILFSKLQHRNLVK 447
           K +G+G FG V      +D    AVK L K +    KE  + +    +L   L+H  LV 
Sbjct: 1   KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L       E+   + +++    L  F   +ERC  L+   RF+     A  + YLH    
Sbjct: 61  LHYSFQTAEKLYFVLDYVNGGEL-FFHLQRERC-FLEPRARFYA-AEVASAIGYLHS--- 114

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
           L II+RDLK  N+LLD   +  ++DFGL +   G E E  T+   GT  Y+APE      
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLTDFGLCKE--GVEPEETTSTFCGTPEYLAPEVLRKEP 172

Query: 568 FSVKSDVFSFGILLLEIVSG 587
           +    D +  G +L E++ G
Sbjct: 173 YDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 66.7 bits (163), Expect = 1e-11
 Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           RGL YLH      I+HRD+K  N+L++ +   KI DFGLAR    DE++  T  VV  Y 
Sbjct: 114 RGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQY- 169

Query: 557 YMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGK 588
           Y APE     + ++   D++S G +  E++  +
Sbjct: 170 YRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR 202

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 65.8 bits (161), Expect = 1e-11
 Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 52/225 (23%)

Query: 391 INKKLGEGGFGPVYK----GTLADEQEIAVKR--LSKISEQGLKELKNEIILFSKLQHRN 444
           I K   +     + K     TL     +AVK+  L   S++ LK L+ EII   +LQH N
Sbjct: 6   IGKCFEDLMIVHLAKHKPTNTL-----VAVKKINLDSCSKEDLKLLQQEIITSRQLQHPN 60

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH------------II 492
           ++  +   I   E  ++   M   S          C+ L    + H            I+
Sbjct: 61  ILPYVTSFIVDSELYVVSPLMAYGS----------CEDL---LKTHFPEGLPELAIAFIL 107

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
                 L Y+H       IHR +KAS++LL  D    +S    + +       G   RVV
Sbjct: 108 KDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSM---IKHGKRQRVV 161

Query: 553 GTYG--------YMAPE--YASDGQFSVKSDVFSFGILLLEIVSG 587
             +         +++PE    +   ++ KSD++S GI   E+ +G
Sbjct: 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANG 206

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 16/221 (7%)

Query: 393 KKLGEGGFGPVYKGTL---ADEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHRNLVKL 448
           K++G G FG V  G +       ++ VK L    S Q   +   E   +  LQH NL++ 
Sbjct: 1   KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQC 60

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLL--DWSKRFHIICGTARGLLYLHQDS 506
           LG C      LL+ EF P   L  ++    + +L+  D +    + C  A GLL+LH+++
Sbjct: 61  LGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN 120

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD- 565
               IH DL   N LL  D+  KI D+GL+     ++     +++     ++APE   + 
Sbjct: 121 ---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEV 177

Query: 566 -GQFSV-----KSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
            G   V     +S+V+S G+ + E+         + SD ++
Sbjct: 178 HGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV 218

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 65.8 bits (161), Expect = 2e-11
 Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 51/239 (21%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKNEIILFSKLQHRN- 444
           D+F + K +G G FG V+     D  ++ A+K L K     +K  +N+I        R+ 
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRK--SDMIK--RNQIAHV--RAERDI 54

Query: 445 --------LVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
                   +VKL       EE L L+ E+MP   L + +  ++     + + RF+I    
Sbjct: 55  LADADSPWIVKLY-YSFQDEEHLYLVMEYMPGGDLMNLLIRKDV--FPEETARFYI---- 107

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNTNR---- 550
           A  +L L    +L  IHRD+K  N+L+D D + K++DFGL +      + E   N     
Sbjct: 108 AELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNL 167

Query: 551 ----------------------VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
                                  VGT  Y+APE      + ++ D +S G++L E++ G
Sbjct: 168 LFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 65.7 bits (160), Expect = 2e-11
 Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 18/203 (8%)

Query: 393 KKLGEGGFGPVYKGT-LADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLL 449
           K++G G +G V         +++A+K+LS+   SE   K    E+ L   +QH N++ LL
Sbjct: 21  KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLL 80

Query: 450 G---CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
                 + G+E    Y  MP    D     +     L   K  +++     GL Y+H   
Sbjct: 81  DVFTSAVSGDEFQDFYLVMPYMQTD---LQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAG 137

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
              IIHRDLK  N+ +++D   KI DFGLAR    + T       V T  Y APE   + 
Sbjct: 138 ---IIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG-----YVVTRWYRAPEVILNW 189

Query: 567 -QFSVKSDVFSFGILLLEIVSGK 588
             ++   D++S G ++ E+++GK
Sbjct: 190 MHYNQTVDIWSVGCIMAEMLTGK 212

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 26/204 (12%)

Query: 394 KLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKELKN--EIILFSKLQ-HRNLVKLL 449
           K+GEG F  V K  +    +  A+K + K   + L+++ N  EI    +L  H N+++L 
Sbjct: 6   KIGEGTFSEVLKAQSRKTGKYYAIKCMKKHF-KSLEQVNNLREIQALRRLSPHPNILRL- 63

Query: 450 GCCIHGEEKL----LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
              +  + K     L++E M + +L   I  ++R   L   +    +    + L ++H++
Sbjct: 64  -IEVLFDRKTGRLALVFELM-DMNLYELIKGRKRP--LPEKRVKSYMYQLLKSLDHMHRN 119

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTNRVVGTYGYMAPE-Y 562
               I HRD+K  N+L+  D   K++DFG  R        TE      + T  Y APE  
Sbjct: 120 G---IFHRDIKPENILIKDD-ILKLADFGSCRGIYSKPPYTE-----YISTRWYRAPECL 170

Query: 563 ASDGQFSVKSDVFSFGILLLEIVS 586
            +DG +  K D+++ G +  EI+S
Sbjct: 171 LTDGYYGPKMDIWAVGCVFFEILS 194

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 18/211 (8%)

Query: 388 NFSINKKLGEGGFGPVY---KGTLADEQEI-AVKRLSKIS----EQGLKELKNEIILFSK 439
           NF + K LG G +G V+   K +  D  ++ A+K L K +     +  +  + E  +   
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 60

Query: 440 LQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           ++    +  L      + KL LI +++    L + +  +ER K     +   I  G    
Sbjct: 61  IRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFK----EQEVQIYSGEI-- 114

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           +L L    +L II+RD+K  N+LLD + +  ++DFGL++ F  DE E       GT  YM
Sbjct: 115 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYM 173

Query: 559 APEY--ASDGQFSVKSDVFSFGILLLEIVSG 587
           AP+     DG      D +S G+L+ E+++G
Sbjct: 174 APDIVRGGDGGHDKAVDWWSMGVLMYELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 64.6 bits (157), Expect = 4e-11
 Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 3/91 (3%)

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           ARG+ +L   SR + IHRDL A N+LL ++   KI DFGLAR    D             
Sbjct: 184 ARGMEFLA--SR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            +MAPE   D  ++ +SDV+SFG+LL EI S
Sbjct: 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFS 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 64.1 bits (156), Expect = 4e-11
 Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 22/207 (10%)

Query: 394 KLGEGGFGPVYK------GTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           +LG+G +G VYK      G     +EI   RL  + E    ++  E+ +  K     +V 
Sbjct: 8   ELGKGNYGSVYKVLHRPTGVTMAMKEI---RLE-LDESKFNQIIMELDILHKAVSPYIVD 63

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
             G         +  E+M   SLD         + +       I     +GL +L ++  
Sbjct: 64  FYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE-- 121

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG- 566
             IIHRD+K +NVL++ +   K+ DFG++        + N    +G   YMAPE    G 
Sbjct: 122 HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN----IGCQSYMAPERIKSGG 177

Query: 567 -----QFSVKSDVFSFGILLLEIVSGK 588
                 ++V+SDV+S G+ +LE+  G+
Sbjct: 178 PNQNPTYTVQSDVWSLGLSILEMALGR 204

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 64.4 bits (157), Expect = 5e-11
 Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 32/232 (13%)

Query: 393 KKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL--- 448
           + LG G  G V+    +D ++ +AVK++     Q +K    EI +  +L H N+VK+   
Sbjct: 11  RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEV 70

Query: 449 -----------LGCCIHGEEKLLIYEFMPN---KSLDSFIFDQERCKLLDWSKRFHIICG 494
                      +G         ++ E+M       L+     +E  +L  +         
Sbjct: 71  LGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQ-------- 122

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGD-ETEGNTNRVV 552
             RGL Y+H  +   ++HRDLK +NV ++  D+  KI DFGLAR        +G  +  +
Sbjct: 123 LLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGL 179

Query: 553 GTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
            T  Y +P    S   ++   D+++ G +  E+++GK      H   ++ LI
Sbjct: 180 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLI 231

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 63.9 bits (155), Expect = 6e-11
 Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 36/211 (17%)

Query: 394 KLGEGGFGPVYKGTLADE--QEIAVKRLS-KISEQG--LKELKNEIIL--FSKLQHRNLV 446
           ++GEG +G V+K        + +A+KR+  +  E+G  L  ++   +L      +H N+V
Sbjct: 8   EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 67

Query: 447 KLLGCCIHG----EEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA----- 496
           +L   C       E KL L++E +          DQ+    LD      +   T      
Sbjct: 68  RLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEPGVPTETIKDMMF 117

Query: 497 ---RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              RGL +LH     R++HRDLK  N+L+      K++DFGLAR +     +     VV 
Sbjct: 118 QLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVV 171

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEI 584
           T  Y APE      ++   D++S G +  E+
Sbjct: 172 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 202

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 64.2 bits (156), Expect = 6e-11
 Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 22/209 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQ--EIAVKRLSK---ISEQGLKELKNEIILFSKLQ 441
           ++F+  + LG G FG V   T  +E    +A+KR  K   I ++ +  + +E  + + + 
Sbjct: 30  EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN 89

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG---TARG 498
           H   V L G         L+ EF+      +F         L  +KRF    G    A+ 
Sbjct: 90  HPFCVNLYGSFKDESYLYLVLEFVIGGEFFTF---------LRRNKRFPNDVGCFYAAQI 140

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           +L       L I++RDLK  N+LLD+D   K++DFG A+       +  T  + GT  Y+
Sbjct: 141 VLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKV-----VDTRTYTLCGTPEYI 195

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSG 587
           APE   +      +D ++ GI + EI+ G
Sbjct: 196 APEILLNVGHGKAADWWTLGIFIYEILVG 224

Length = 340

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 63.5 bits (154), Expect = 7e-11
 Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 19/217 (8%)

Query: 384 NATDNFSINKKLGEGGFGPVYK-GTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ- 441
           + +D + I + +G+G +G V+K     +  + AVK L  I +   +E++ E  +   L  
Sbjct: 15  DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID-EEIEAEYNILKALSD 73

Query: 442 HRNLVKLLGC-----CIHGEEKLLIYEFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGT 495
           H N+VK  G        +G++  L+ E     S+   +    +R + ++     +I+   
Sbjct: 74  HPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEA 133

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             GL +LH +   + IHRD+K +N+LL  +   K+ DFG++          NT+  VGT 
Sbjct: 134 LMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS--VGTP 188

Query: 556 GYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSG 587
            +MAPE  +     D  +  + DV+S GI  +E+  G
Sbjct: 189 FWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDG 225

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 63.9 bits (155), Expect = 7e-11
 Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 13/200 (6%)

Query: 393 KKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEI----ILFSKLQHRNLVK 447
           K +G+G FG V      A+E+  AVK L K +    KE K+ +    +L   ++H  LV 
Sbjct: 1   KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L       ++   + +++    L  +   +ERC  L+   RF+     A  L YLH    
Sbjct: 61  LHFSFQTADKLYFVLDYINGGEL-FYHLQRERC-FLEPRARFYA-AEIASALGYLHS--- 114

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
           L I++RDLK  N+LLD   +  ++DFGL +     E  G T+   GT  Y+APE      
Sbjct: 115 LNIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNGTTSTFCGTPEYLAPEVLHKQP 172

Query: 568 FSVKSDVFSFGILLLEIVSG 587
           +    D +  G +L E++ G
Sbjct: 173 YDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 63.8 bits (155), Expect = 8e-11
 Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 17/210 (8%)

Query: 388 NFSINKKLGEGGFGPVY---KGTLADEQEI-AVKRLSKIS----EQGLKELKNEIILFSK 439
           NF + K LG G +G V+   K T  D  ++ A+K L K +     + ++  + E  +   
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60

Query: 440 LQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           ++    +  L      E KL LI +++    + + ++ ++     +   RF+    +   
Sbjct: 61  VRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFS--EDEVRFY----SGEI 114

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           +L L    +L I++RD+K  N+LLD + +  ++DFGL++ F  +E E  T    GT  YM
Sbjct: 115 ILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYM 173

Query: 559 APEYA-SDGQFSVKSDVFSFGILLLEIVSG 587
           APE     G      D +S GIL+ E+++G
Sbjct: 174 APEIIRGKGGHGKAVDWWSLGILIFELLTG 203

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 63.5 bits (155), Expect = 1e-10
 Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 59/230 (25%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSKISE------QGLKELKNEIIL 436
             +   + +G G +G V     A +    +++A+K++    +      + L+ELK    +
Sbjct: 5   SRYKPIENIGSGAYGVVCS---AIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELK----I 57

Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDS---FIFDQERCKLLDWSKRFHIIC 493
               +H N++ +                 P  +       + D     L       HII 
Sbjct: 58  LRHFKHDNIIAIRDI------------LRPPGADFKDVYVVMDLMESDL------HHIIH 99

Query: 494 GTA---------------RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
                             RGL Y+H  +   +IHRDLK SN+L+++D   +I DFG+AR 
Sbjct: 100 SDQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG 156

Query: 539 FGGDETEGNT--NRVVGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIV 585
                TE        V T  Y APE   S  +++   D++S G +  E++
Sbjct: 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEML 206

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 63.0 bits (153), Expect = 1e-10
 Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 48/257 (18%)

Query: 381 TIANATDNFSINKKLGEGGFGPV-YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILF 437
           TI    D +   K++G G +G V          ++A+K+L +   SE   K    E+ L 
Sbjct: 9   TIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLL 68

Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF----------------IFDQERCK 481
             ++H N++ LL              F P+ SLD F                +   E+  
Sbjct: 69  KHMKHENVIGLLDV------------FTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEK-- 114

Query: 482 LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
            L   +   ++    +GL Y+H      IIHRDLK  N+ +++D   KI DFGLAR    
Sbjct: 115 -LSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR---- 166

Query: 542 DETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
            +T+      V T  Y APE   +   ++   D++S G ++ E+++GK     +   + L
Sbjct: 167 -QTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKP---LFKGHDHL 222

Query: 601 NLIRHAWKLWNEGMPSQ 617
           + +    K+   G PS+
Sbjct: 223 DQLMEIMKV--TGTPSK 237

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 63.5 bits (154), Expect = 1e-10
 Identities = 39/91 (42%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           ARG+ +L   +    +HRDL A NVLL Q    KI DFGLAR    D    +        
Sbjct: 247 ARGMEFLASKN---CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPV 303

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            +MAPE   D  ++  SDV+S+GILL EI S
Sbjct: 304 KWMAPESIFDNLYTTLSDVWSYGILLWEIFS 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 62.5 bits (152), Expect = 2e-10
 Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 15/201 (7%)

Query: 393 KKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKNEI----ILFSKLQHRNLVK 447
           K +G+G FG V       + +  AVK L K +    KE K+ +    +L   ++H  LV 
Sbjct: 1   KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 448 LLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           L        +KL  + +++    L  F   +ER    +   RF+     A  L YLH   
Sbjct: 61  L-HYSFQTADKLYFVLDYVNGGEL-FFHLQRERS-FPEPRARFYA-AEIASALGYLHS-- 114

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
            L II+RDLK  N+LLD   +  ++DFGL +   G E    T+   GT  Y+APE     
Sbjct: 115 -LNIIYRDLKPENILLDSQGHVVLTDFGLCKE--GIEHSKTTSTFCGTPEYLAPEVLRKQ 171

Query: 567 QFSVKSDVFSFGILLLEIVSG 587
            +    D +  G +L E++ G
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 63.3 bits (154), Expect = 2e-10
 Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 37/227 (16%)

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           LL +H      +IHRD+K++N+LL  +   K+ DFG ++ +    ++       GT  Y+
Sbjct: 153 LLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYV 212

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE      +S K+D+FS G+LL E+++ K+    +  +N   ++        + +P  +
Sbjct: 213 APEIWRRKPYSKKADMFSLGVLLYELLTLKRP---FDGENMEEVMHKTLAGRYDPLPPSI 269

Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC------MPSVILMLGS--EIVLPQPK 670
                  S  + E++      LL     P+ RP       MP   L +    EIV  QP 
Sbjct: 270 -------SPEMQEIVT----ALLSSD--PKRRPSSSKLLNMPICKLFISGLLEIVQTQPG 316

Query: 671 QPGYLADRKSTRLDSS------------LSMPESSSTNTITISELEG 705
             G L D  S ++  +              M ES ST   + + LEG
Sbjct: 317 FSGPLRDTISRQIQQTKQLLQVERRRIVRQMEESLST-AASTTILEG 362

Length = 496

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 62.2 bits (151), Expect = 3e-10
 Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDET---EGNTNRVVGTYGYMAPEYASDGQ 567
           IHRDL A N+LL      KI DFGLAR    D     +GN    V    +MAPE   +  
Sbjct: 236 IHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPV---KWMAPESIFNCV 292

Query: 568 FSVKSDVFSFGILLLEIVS 586
           ++ +SDV+S+GILL EI S
Sbjct: 293 YTFESDVWSYGILLWEIFS 311

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 61.2 bits (148), Expect = 4e-10
 Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 17/201 (8%)

Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSKIS----EQGLKELKNEIILFSKLQHRNLVKLLG 450
           +G G +  V    L    +I   ++ K      ++ +  ++ E  +F +      +  L 
Sbjct: 3   IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH 62

Query: 451 CCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--ICGTARGLLYLHQDSR 507
            C     +L L+ E++    L  F   ++R KL +   RF+   IC     L +LH+   
Sbjct: 63  SCFQTTSRLFLVIEYVNGGDL-MFHMQRQR-KLPEEHARFYAAEIC---IALNFLHERG- 116

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
             II+RDLK  NVLLD D + K++D+G+ +   G      T+   GT  Y+APE     +
Sbjct: 117 --IIYRDLKLDNVLLDADGHIKLTDYGMCKE--GLGPGDTTSTFCGTPNYIAPEILRGEE 172

Query: 568 FSVKSDVFSFGILLLEIVSGK 588
           +    D ++ G+L+ E+++G+
Sbjct: 173 YGFSVDWWALGVLMFEMMAGR 193

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 60.6 bits (147), Expect = 5e-10
 Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 28/210 (13%)

Query: 395 LGEGGFGPVYKGTLAD--------EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           LG+G F  ++KG   +        + E+ +K L K      +       + S+L H++LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
              G C+ G+E +++ E++   SLD+++   +    + W  +  +    A  L +L    
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KLEVAKQLAWALHFLEDKG 120

Query: 507 RLRIIHRDLKASNVLL-----DQDMNP---KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
              + H ++ A NVLL      +  NP   K+SD G++      E      R+     ++
Sbjct: 121 ---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEIL--LERI----PWV 171

Query: 559 APEYASDGQ-FSVKSDVFSFGILLLEIVSG 587
            PE   + Q  S+ +D +SFG  L EI SG
Sbjct: 172 PPECIENPQNLSLAADKWSFGTTLWEIFSG 201

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 61.6 bits (149), Expect = 5e-10
 Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 45/275 (16%)

Query: 325 ALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNEDQNIDLDLPLFELATIAN 384
            L ++V+   +   +  +NI   + RY +  R  R  + K ED                 
Sbjct: 2   GLNSLVLDLDFPALRKNKNIDNFLNRYEKIVRKIRKLQMKAED----------------- 44

Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKI-----SEQGLKELKNEIILFS 438
               + + K +G G FG V        Q++ A+K LSK      S+      + +I+ F+
Sbjct: 45  ----YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 100

Query: 439 KLQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
              +   V  L C    ++ L ++ E+MP   L + + + +  +   W+K +     TA 
Sbjct: 101 ---NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE--KWAKFY-----TAE 150

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-NTNRVVGTYG 556
            +L L     + +IHRD+K  N+LLD+  + K++DFG       DET     +  VGT  
Sbjct: 151 VVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVRCDTAVGTPD 208

Query: 557 YMAPEY----ASDGQFSVKSDVFSFGILLLEIVSG 587
           Y++PE       DG +  + D +S G+ L E++ G
Sbjct: 209 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 243

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 60.7 bits (147), Expect = 6e-10
 Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 33/213 (15%)

Query: 394 KLGEGGFGPVYKGTLADE-QEIAVKRLS-KISEQGLK-ELKNEIILFSKLQ---HRNLVK 447
           ++G G +G VYK         +A+K +  + +E GL      E+ L  +L+   H N+V+
Sbjct: 7   EIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVR 66

Query: 448 LLGCCIHG----EEKL-LIYEFMPNKSLDSFI-------FDQERCKLLDWSKRFHIICGT 495
           L+  C       E K+ L++E + ++ L +++          E  K  D  ++F      
Sbjct: 67  LMDVCATSRTDRETKVTLVFEHV-DQDLRTYLDKVPPPGLPAETIK--DLMRQF------ 117

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
            RGL +LH +    I+HRDLK  N+L+      K++DFGLAR +     +     VV T 
Sbjct: 118 LRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIY---SCQMALTPVVVTL 171

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      ++   D++S G +  E+   K
Sbjct: 172 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 204

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 61.0 bits (148), Expect = 7e-10
 Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 10/104 (9%)

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGY 557
           L YLH      +++RDLK  N++LD+D + KI+DFGL +      ++G T +   GT  Y
Sbjct: 108 LGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKE---GISDGATMKTFCGTPEY 161

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSD-NKL 600
           +APE   D  +    D +  G+++ E++ G+    FY+ D  KL
Sbjct: 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKL 203

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 62.1 bits (151), Expect = 8e-10
 Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 47/234 (20%)

Query: 389 FSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK-ISEQGL--KELKNEIILFSKLQHRN 444
           + I + +G+GG G VY        + +A+K++ + +SE  L  K    E  + + L H  
Sbjct: 4   YDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPG 63

Query: 445 LVKLLGCCIHGEEKLLIYEFMP---NKSLDSFIFDQERCKLLDWSKR------------- 488
           +V +   C  G+    +Y  MP     +L S +    + + L  SK              
Sbjct: 64  IVPVYSICSDGD---PVYYTMPYIEGYTLKSLLKSVWQKESL--SKELAEKTSVGAFLSI 118

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE--- 545
           FH IC T     Y+H  S+  ++HRDLK  N+LL       I D+G A     +E +   
Sbjct: 119 FHKICATIE---YVH--SK-GVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLD 172

Query: 546 ---GNTN----------RVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                 N          ++VGT  YMAPE       S  +D+++ G++L ++++
Sbjct: 173 IDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT 226

Length = 932

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 60.6 bits (147), Expect = 9e-10
 Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 29/211 (13%)

Query: 388 NFSINKKLGEGGFGPV----YKGTLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKL 440
           +F + + LG G FG V    +KGT    +  A+K L K   +  + ++ +  E  +  +L
Sbjct: 19  DFEMGETLGTGSFGRVRIAKHKGT---GEYYAIKCLKKREILKMKQVQHVAQEKSILMEL 75

Query: 441 QHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
            H  +V ++ C    E ++  + EF+    L + +    R    D +K +H     A  +
Sbjct: 76  SHPFIVNMM-CSFQDENRVYFLLEFVVGGELFTHLRKAGRFPN-DVAKFYH-----AELV 128

Query: 500 L---YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           L   YLH      II+RDLK  N+LLD   + K++DFG A+     +    T  + GT  
Sbjct: 129 LAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAK-----KVPDRTFTLCGTPE 180

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           Y+APE           D ++ G+LL E ++G
Sbjct: 181 YLAPEVIQSKGHGKAVDWWTMGVLLYEFIAG 211

Length = 329

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 60.4 bits (146), Expect = 1e-09
 Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 7/94 (7%)

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGT 554
           + GL +LH+     II+RDLK  NV+LD + + KI+DFG+ +       +G T R   GT
Sbjct: 111 SVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE---HMVDGVTTRTFCGT 164

Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y+APE  +   +    D +++G+LL E+++G+
Sbjct: 165 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 60.3 bits (146), Expect = 1e-09
 Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 18/202 (8%)

Query: 395 LGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKNEI----ILFSKLQHRN--LVK 447
           +G+G FG VY+    D + I A+K LSK      KE+ + I    IL   L   +  +V 
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L        +  L+ ++M    L  F   Q+  +  +   +F+I    A  +L L    +
Sbjct: 61  LKFSFQTDSDLYLVTDYMSGGEL--FWHLQKEGRFSEDRAKFYI----AELVLALEHLHK 114

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTNRVVGTYGYMAPEYASDG 566
             I++RDLK  N+LLD   +  + DFGL++A    ++T   TN   GT  Y+APE   D 
Sbjct: 115 YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT---TNTFCGTTEYLAPEVLLDE 171

Query: 567 Q-FSVKSDVFSFGILLLEIVSG 587
           + ++   D +S G+L+ E+  G
Sbjct: 172 KGYTKHVDFWSLGVLVFEMCCG 193

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 61.3 bits (148), Expect = 1e-09
 Identities = 71/251 (28%), Positives = 112/251 (44%), Gaps = 44/251 (17%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKE-----LKNEIILFSKLQ 441
           + + + KK+G G FG V+       QE    +   IS +GLKE     L  E+ +  +L+
Sbjct: 13  NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWK--AISYRGLKEREKSQLVIEVNVMRELK 70

Query: 442 HRNLVKLLGCCIH-GEEKLLI-YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           H+N+V+ +   ++   +KL I  EF     L   I   ++C  +      H I    R L
Sbjct: 71  HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNI---QKCYKMFGKIEEHAIVDITRQL 127

Query: 500 L----YLHQ----DSRLRIIHRDLKASNVLLD-------------QDMN----PKISDFG 534
           L    Y H      +  R++HRDLK  N+ L               ++N     KI DFG
Sbjct: 128 LHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFG 187

Query: 535 LARAFGGDETEGNTNRVVGTYGYMAPEYA--SDGQFSVKSDVFSFGILLLEIVSGKKNRG 592
           L++  G    E   +  VGT  Y +PE        +  KSD+++ G ++ E+ SGK    
Sbjct: 188 LSKNIG---IESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP-- 242

Query: 593 FYHSDNKLNLI 603
           F+ ++N   LI
Sbjct: 243 FHKANNFSQLI 253

Length = 1021

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 5/93 (5%)

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           A GL +LH      II+RDLK  NV+LD + + KI+DFG+ +    D     T    GT 
Sbjct: 111 AIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV--TTKTFCGTP 165

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y+APE  +   +    D ++FG+LL E+++G+
Sbjct: 166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 59.1 bits (143), Expect = 3e-09
 Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 19/215 (8%)

Query: 389 FSINKKLGEGGFGPVYKGTL---ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           ++I   L  G  G V+  T       +++ VK ++     G K    EI +   + HR +
Sbjct: 94  YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVT-----GGKTPGREIDILKTISHRAI 148

Query: 446 VKLLGCCIHG-EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           + L    IH    K  +   MP    D F +  +R   L   +   I       L YLH 
Sbjct: 149 INL----IHAYRWKSTVCMVMPKYKCDLFTY-VDRSGPLPLEQAITIQRRLLEALAYLHG 203

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS 564
                IIHRD+K  N+ LD+  N  + DFG A                GT    +PE  +
Sbjct: 204 RG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLA 260

Query: 565 DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
              +  K+D++S G++L E+    KN   +    K
Sbjct: 261 LDPYCAKTDIWSAGLVLFEMSV--KNVTLFGKQVK 293

Length = 392

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 58.5 bits (141), Expect = 4e-09
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L YLH      +++RD+K  N++LD+D + KI+DFGL +   G           GT  Y+
Sbjct: 108 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKTFCGTPEYL 162

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
           APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 163 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 201

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 58.1 bits (140), Expect = 5e-09
 Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 6/102 (5%)

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH +    +++RDLK  N++LD+D + KI+DFGL +   G +         GT  Y
Sbjct: 107 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKTFCGTPEY 162

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
           +APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 163 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 202

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 57.8 bits (139), Expect = 6e-09
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 7/102 (6%)

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH     +I++RDLK  N++LD+D + KI+DFGL +   G           GT  Y
Sbjct: 107 ALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKE--GITDAATMKTFCGTPEY 161

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
           +APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 201

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 59.1 bits (143), Expect = 6e-09
 Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 18/189 (9%)

Query: 412 QEIAVKRLSKISEQGLKE---LKNEIILFSKLQHRNLVKLLGCCIHGEEKLL-IYEFMPN 467
            E+A+K L   + +   +    + E  L ++L H N+V LL         L  ++E++P 
Sbjct: 4   HEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVPG 63

Query: 468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQ 524
           ++L   +        L   +   ++      L   H      I+HRDLK  N+++     
Sbjct: 64  RTLREVLAAD---GALPAGETGRLMLQVLDALACAHNQG---IVHRDLKPQNIMVSQTGV 117

Query: 525 DMNPKISDFGLARAFGGDE-----TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGI 579
             + K+ DFG+     G       T   T  V+GT  Y APE       +  SD++++G+
Sbjct: 118 RPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGL 177

Query: 580 LLLEIVSGK 588
           + LE ++G+
Sbjct: 178 IFLECLTGQ 186

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 57.1 bits (138), Expect = 7e-09
 Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 31/214 (14%)

Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNE----------IILFSKLQHRN 444
           LG+G F  +YKG L  + ++ +    +     LK L ++            L S+L H++
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           LVKL G C+  +E +++ E++    LD F+  ++    L W  +  +    A  L YL  
Sbjct: 63  LVKLYGVCV-RDENIMVEEYVKFGPLDVFLHREKNNVSLHW--KLDVAKQLASALHYLED 119

Query: 505 DSRLRIIHRDLKASNVLLDQDMNP-------KISDFGLARAFGGDETEGNTNRVVGTYGY 557
               +++H ++   N+L+ +           K+SD G+       E        V    +
Sbjct: 120 K---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREER------VERIPW 170

Query: 558 MAPEYASDGQFSVKS--DVFSFGILLLEIVSGKK 589
           +APE   +GQ S+    D +SFG  LLEI S  +
Sbjct: 171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGE 204

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 57.4 bits (138), Expect = 8e-09
 Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 13/199 (6%)

Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSKIS----EQGLKELKNEIILFSKLQHRNLVKLLG 450
           +G G +  V    L   + I   ++ K      ++ +  ++ E  +F +  +   +  L 
Sbjct: 3   IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 62

Query: 451 CCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
            C   E +L  + E++    L  F   ++R KL +   RF+     +  L YLH+     
Sbjct: 63  SCFQTESRLFFVIEYVNGGDL-MFHMQRQR-KLPEEHARFYS-AEISLALNYLHERG--- 116

Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFS 569
           II+RDLK  NVLLD + + K++D+G+ +   G      T+   GT  Y+APE      + 
Sbjct: 117 IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSTFCGTPNYIAPEILRGEDYG 174

Query: 570 VKSDVFSFGILLLEIVSGK 588
              D ++ G+L+ E+++G+
Sbjct: 175 FSVDWWALGVLMFEMMAGR 193

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 57.5 bits (139), Expect = 9e-09
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 6/95 (6%)

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTNRVVGTY 555
           R L Y+H  +   + HRDLK  N+L + D   KI DFGLAR AF    T       V T 
Sbjct: 114 RALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 170

Query: 556 GYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGK 588
            Y APE       +++   D++S G +  E+++GK
Sbjct: 171 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 205

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 57.5 bits (139), Expect = 9e-09
 Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 20/205 (9%)

Query: 393 KKLGEGGFGPVY---KGTLADEQEI-AVKRLSKI----SEQGLKELKNEIILFSKLQHRN 444
           K LG+GG+G V+   K T AD  +I A+K L K     +++     K E  +   ++H  
Sbjct: 2   KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPF 61

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +V L+     G +  LI E++    L  F+  +     ++ +  F++    +  L +LHQ
Sbjct: 62  IVDLIYAFQTGGKLYLILEYLSGGEL--FMHLEREGIFMEDTACFYL-SEISLALEHLHQ 118

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN--TNRVVGTYGYMAPEY 562
                II+RDLK  N+LLD   + K++DFGL +    +       T+   GT  YMAPE 
Sbjct: 119 ---QGIIYRDLKPENILLDAQGHVKLTDFGLCK----ESIHEGTVTHTFCGTIEYMAPEI 171

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                     D +S G L+ ++++G
Sbjct: 172 LMRSGHGKAVDWWSLGALMYDMLTG 196

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 56.9 bits (137), Expect = 9e-09
 Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 18/209 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRL------SKISEQGLKELKNEIILFSK 439
           + F +   +GEG +G V K    + +EI A+K+        ++ E  L+ELK    +   
Sbjct: 1   NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELK----MLRT 56

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           L+  N+V+L        +  L++E++  K++   + +       +  + +  I    + +
Sbjct: 57  LKQENIVELKEAFRRRGKLYLVFEYV-EKNMLELLEEMPNGVPPEKVRSY--IYQLIKAI 113

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            + H++    I+HRD+K  N+L+  +   K+ DFG AR    + +  N    V T  Y +
Sbjct: 114 HWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNL-SEGSNANYTEYVATRWYRS 169

Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE      +    D++S G +L E+  G+
Sbjct: 170 PELLLGAPYGKAVDMWSVGCILGELSDGQ 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 56.5 bits (137), Expect = 2e-08
 Identities = 65/234 (27%), Positives = 95/234 (40%), Gaps = 51/234 (21%)

Query: 393 KKLGEGGFGPVY----KGTLADEQEIAVKRLSKISEQGLKELKN---EIILFSKLQHRNL 445
           K LG+G  G V+    KGT    +  A+K L K       ++K    E  + + L H  L
Sbjct: 7   KLLGKGDVGRVFLVRLKGT---GKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFL 63

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH---IICGTARGLLYL 502
             L           L+ ++ P   L   +  Q    L +   RF+   ++      L YL
Sbjct: 64  PTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLA----LEYL 119

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL-------------ARAFGG-------- 541
           H    L I++RDLK  N+LL +  +  +SDF L             A   G         
Sbjct: 120 HL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSI 176

Query: 542 ------DETEGNTNRVVGTYGYMAPEYAS-DGQ-FSVKSDVFSFGILLLEIVSG 587
                 +E    +N  VGT  Y+APE  S DG   +V  D ++ GILL E++ G
Sbjct: 177 PSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAV--DWWTLGILLYEMLYG 228

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 56.4 bits (136), Expect = 2e-08
 Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 17/145 (11%)

Query: 449 LGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--ICGTARGLLYLHQD 505
           L  C   E +L  + EF+    L  F   ++R KL +   RF+   I      L +LH+ 
Sbjct: 61  LHSCFQTESRLFFVIEFVSGGDL-MFHMQRQR-KLPEEHARFYSAEIS---LALNFLHER 115

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY--A 563
               II+RDLK  NVLLD + + K++D+G+ +   G      T+   GT  Y+APE    
Sbjct: 116 G---IIYRDLKLDNVLLDAEGHIKLTDYGMCKE--GIRPGDTTSTFCGTPNYIAPEILRG 170

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGK 588
            D  FSV  D ++ G+L+ E+++G+
Sbjct: 171 EDYGFSV--DWWALGVLMFEMMAGR 193

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 56.7 bits (137), Expect = 2e-08
 Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 24/222 (10%)

Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKI-----SEQGLKELK 431
           ++  +    ++F + K +G G FG V        +++ A+K LSK      S+      +
Sbjct: 34  KITKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEE 93

Query: 432 NEIILFSKLQHRNLVKLLGCCIHGEEKLL--IYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
            +I+  +      +V+L       ++K L  + E+MP   L + + + +  +   W+ RF
Sbjct: 94  RDIMAHA--NSEWIVQL--HYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPE--KWA-RF 146

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN 549
           +    TA  +L L     +  IHRD+K  N+LLD+  + K++DFG       +      +
Sbjct: 147 Y----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV-RCD 201

Query: 550 RVVGTYGYMAPEY----ASDGQFSVKSDVFSFGILLLEIVSG 587
             VGT  Y++PE       DG +  + D +S G+ L E++ G
Sbjct: 202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 243

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 56.2 bits (135), Expect = 3e-08
 Identities = 32/76 (42%), Positives = 42/76 (55%)

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           +HRDL A NVL+ +    KI DFGLAR    D    +         +MAPE   +  ++ 
Sbjct: 261 VHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTT 320

Query: 571 KSDVFSFGILLLEIVS 586
            SDV+SFGILL EI +
Sbjct: 321 LSDVWSFGILLWEIFT 336

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 55.3 bits (133), Expect = 4e-08
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 12/197 (6%)

Query: 395 LGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +G+G FG V +    D Q I A+K + K   +S   +     E  + +++    +V L  
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKF 60

Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                E+  L+  F+    L  F   Q   +      RF+    TA  L  L    +  +
Sbjct: 61  SFQSPEKLYLVLAFINGGEL--FHHLQREGRFDLSRARFY----TAELLCALENLHKFNV 114

Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           I+RDLK  N+LLD   +  + DFGL +    D+ +  TN   GT  Y+APE      ++ 
Sbjct: 115 IYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK--TNTFCGTPEYLAPELLLGHGYTK 172

Query: 571 KSDVFSFGILLLEIVSG 587
             D ++ G+LL E+++G
Sbjct: 173 AVDWWTLGVLLYEMLTG 189

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 55.9 bits (134), Expect = 4e-08
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 29/171 (16%)

Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE---FMPNKSLD----SFIFDQERCK 481
           +L+NEI+   +L H N++K+        E++L  E   +M  +  D    SF++D+    
Sbjct: 209 QLENEILALGRLNHENILKI--------EEILRSEANTYMITQKYDFDLYSFMYDEA--- 257

Query: 482 LLDWSKR------FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL 535
             DW  R        I+      + Y+H     ++IHRD+K  N+ L+ D    + DFG 
Sbjct: 258 -FDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNCDGKIVLGDFGT 313

Query: 536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           A  F   E E      VGT    +PE  +   +   +D++S G++LL+++S
Sbjct: 314 AMPF-EKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363

Length = 501

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 54.6 bits (131), Expect = 8e-08
 Identities = 58/200 (29%), Positives = 86/200 (43%), Gaps = 13/200 (6%)

Query: 393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEI----ILFSKLQHRNLVK 447
           K +G+G FG V       D +  AVK L K      KE K+ +    +L   ++H  LV 
Sbjct: 1   KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L       E+   + +F+    L  F   Q      +   RF+     A  L YLH    
Sbjct: 61  LHYSFQTTEKLYFVLDFVNGGEL--FFHLQRERSFPEPRARFYA-AEIASALGYLHS--- 114

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
           + I++RDLK  N+LLD   +  ++DFGL +   G      T    GT  Y+APE      
Sbjct: 115 INIVYRDLKPENILLDSQGHVVLTDFGLCKE--GIAQSDTTTTFCGTPEYLAPEVIRKQP 172

Query: 568 FSVKSDVFSFGILLLEIVSG 587
           +    D +  G +L E++ G
Sbjct: 173 YDNTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 53.7 bits (129), Expect = 9e-08
 Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 31/235 (13%)

Query: 393 KKLGEGGFGPVYKGTLADEQEIA---VKRLSKISEQGLKELKNEIIL----FSKLQHRNL 445
           +++G G FG V    +  +  +A   VK L   +    KE +NE +     +  LQH N+
Sbjct: 1   QEIGNGWFGKVLLSEIYTDTGVARVVVKELK--ANASSKE-QNEFLQQGDPYRILQHPNI 57

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTARGLLY 501
           ++ LG C+     LL++E+     L S++  ++      +LL   +   + C  A G+ +
Sbjct: 58  LQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQR---MACEIAAGVTH 114

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTNRVVGTYGYMAP 560
           +H   +   +H DL   N  L  D+  K+ D+G+  + +  D  E   ++ V    ++AP
Sbjct: 115 MH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCV-PLRWLAP 170

Query: 561 EYASDGQFSV-------KSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK 608
           E   +    +        S+V++ G+ L E+         Y   +   ++ H  K
Sbjct: 171 ELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQP--YSHLSDREVLNHVIK 223

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 54.2 bits (130), Expect = 9e-08
 Identities = 70/300 (23%), Positives = 118/300 (39%), Gaps = 79/300 (26%)

Query: 414 IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF 473
           + +  L   +E+ LK L+NE++L    +H N++        G    +I  FM   S +S 
Sbjct: 30  VRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSL 89

Query: 474 I---FDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI 530
           +   F +   + L  +    I+ G  RGL YLHQ+     IHR++KAS++L+  D    +
Sbjct: 90  LKTYFPEGMSEALIGN----ILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSL 142

Query: 531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ--------------FSVKSDVFS 576
           S  GL+  +      G   +VV    Y  P++++                 ++VKSD++S
Sbjct: 143 S--GLSHLYSLVR-NGQKAKVV----YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYS 195

Query: 577 FGILLLEIVSG--------------KKNRGFYHSDNKLNLIRHA---WKLWNEGMPSQLI 619
            GI   E+ +G              +K +G  +S   +          K    G+ S + 
Sbjct: 196 VGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIG 255

Query: 620 DACFKDS----------------------FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
           ++                            NL E         LC+QQ PE RP   S++
Sbjct: 256 ESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVE---------LCLQQDPEKRPSASSLL 306

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 25/213 (11%)

Query: 394 KLGEGGFGPVYKGTLAD---EQEIAVKRL--SKISEQGLKELKNEIILFSKLQHRNLVKL 448
           K+G G +G VYK    D   E+E A+K++  + IS    +E    I L  +L+H N++ L
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACRE----IALLRELKHPNVIAL 63

Query: 449 LGCCI-HGEEKL-LIYEFMPNKSLDSFIFDQ-----ERCKLLDWSKRFHIICGTARGLLY 501
               + H + K+ L++++  +       F +     ++   L  S    ++     G+ Y
Sbjct: 64  QKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHY 123

Query: 502 LHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLARAFGGD-ETEGNTNRVVGTYG 556
           LH +    ++HRDLK +N+L+     +    KI+D G AR F    +   + + VV T+ 
Sbjct: 124 LHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 180

Query: 557 YMAPEYASDGQFSVKS-DVFSFGILLLEIVSGK 588
           Y APE     +   K+ D+++ G +  E+++ +
Sbjct: 181 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 213

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 35/249 (14%)

Query: 353 RENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQ 412
           R + NN G ++  E + ID D+         +   ++ +   +G G FG VY+    D  
Sbjct: 40  RSHNNNAGEDEDEE-KMIDNDIN-------RSPNKSYKLGNIIGNGSFGVVYEAICIDTS 91

Query: 413 E-IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGC----CIHGEEKLL----IYE 463
           E +A+K++     Q  +    E+++   L H N++ L       C    EK +    + E
Sbjct: 92  EKVAIKKVL----QDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVME 147

Query: 464 FMP---NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNV 520
           F+P   +K +  +  +     L       + +C   R L Y+H      I HRDLK  N+
Sbjct: 148 FIPQTVHKYMKHYARNNHALPLFLVKLYSYQLC---RALAYIHSKF---ICHRDLKPQNL 201

Query: 521 LLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA-SDGQFSVKSDVFSFG 578
           L+D + +  K+ DFG A+     +    +   + +  Y APE       ++   D++S G
Sbjct: 202 LIDPNTHTLKLCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLG 258

Query: 579 ILLLEIVSG 587
            ++ E++ G
Sbjct: 259 CIIAEMILG 267

Length = 440

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 52.7 bits (126), Expect = 3e-07
 Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 22/163 (13%)

Query: 433 EIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHII 492
           E  +   + H ++++L G   + +   LI   +P    D +      C L    KR   I
Sbjct: 133 EAHILRAINHPSIIQLKGTFTYNKFTCLI---LPRYKTDLY------CYLAA--KRNIAI 181

Query: 493 C-------GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE 545
           C          R + YLH++   RIIHRD+KA N+ ++   +  + DFG A  F  D   
Sbjct: 182 CDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFG-AACFPVDINA 237

Query: 546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
                  GT    APE  +   +    D++S GI+L E+ +  
Sbjct: 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH 280

Length = 391

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 52.4 bits (125), Expect = 3e-07
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 394 KLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVKLLGCC 452
           K+G G +G VYK    D ++     L +I   G+      EI L  +L+H N++ L    
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 67

Query: 453 I-HGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY-----LHQD 505
           + H + K+ L++++  +       F   R    +  K   +  G  + LLY     +H  
Sbjct: 68  LSHADRKVWLLFDYAEHDLWHIIKF--HRASKAN-KKPVQLPRGMVKSLLYQILDGIHYL 124

Query: 506 SRLRIIHRDLKASNVLL----DQDMNPKISDFGLARAFGGD-ETEGNTNRVVGTYGYMAP 560
               ++HRDLK +N+L+     +    KI+D G AR F    +   + + VV T+ Y AP
Sbjct: 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 184

Query: 561 EYASDGQFSVKS-DVFSFGILLLEIVSGK 588
           E     +   K+ D+++ G +  E+++ +
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLTSE 213

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|221289 pfam11883, DUF3403, Domain of unknown function (DUF3403)

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 665 VLPQPKQPGYLADRKSTRLDSSLSMP--ESSSTNTITISELEGR 706
            +PQPKQPG+   R     DSS S    ES + N +T+S ++ R
Sbjct: 5   EIPQPKQPGFCVGRSPYETDSSSSTQRDESWTVNQVTVSVIDAR 48

This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 50 amino acids in length. This domain is found associated with pfam00069, pfam08276, pfam00954, pfam01453. Length = 48

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 52.1 bits (125), Expect = 4e-07
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 24/141 (17%)

Query: 460 LIYEFMPNKSLDSF------IFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHR 513
           L+ E+ P   L S        FD++         +F++    A  +L +H   ++  +HR
Sbjct: 78  LVMEYQPGGDLLSLLNRYEDQFDEDMA-------QFYL----AELVLAIHSVHQMGYVHR 126

Query: 514 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY------ASDGQ 567
           D+K  NVL+D+  + K++DFG A     ++   N+   VGT  Y+APE          G 
Sbjct: 127 DIKPENVLIDRTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGT 185

Query: 568 FSVKSDVFSFGILLLEIVSGK 588
           + V+ D +S G++  E++ G+
Sbjct: 186 YGVECDWWSLGVIAYEMIYGR 206

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 51.6 bits (123), Expect = 9e-07
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 26/214 (12%)

Query: 387 DNFSINKKLGEGGFGPV----YKGTLADEQEIAVKRLSKI-----SEQGLKELKNEIILF 437
           +++ + K +G G FG V    +K T    +  A+K LSK      S+      + +I+ F
Sbjct: 43  EDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 99

Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           +      +V+L           ++ E+MP   L + + + +  +   W+ RF+    TA 
Sbjct: 100 ANSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KWA-RFY----TAE 150

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            +L L     +  IHRD+K  N+LLD+  + K++DFG       +      +  VGT  Y
Sbjct: 151 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDY 209

Query: 558 MAPEY----ASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE       DG +  + D +S G+ L E++ G
Sbjct: 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 243

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 51.2 bits (122), Expect = 9e-07
 Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 27/217 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           D+F I K +G G FG V    +   + I A+K L+K   + LK  + E   F   + RN+
Sbjct: 1   DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKW--EMLK--RAETACFR--EERNV 54

Query: 446 --------VKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
                   +  L      E  L L+ ++     L + +   E  +L +   RF+I    A
Sbjct: 55  LVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYI----A 109

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
             +L +H   +L  +HRD+K  NVLLD + + +++DFG       D T   ++  VGT  
Sbjct: 110 EMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV-QSSVAVGTPD 168

Query: 557 YMAPEYASD-----GQFSVKSDVFSFGILLLEIVSGK 588
           Y++PE         G++  + D +S G+ + E++ G+
Sbjct: 169 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 205

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 51.2 bits (122), Expect = 1e-06
 Identities = 24/78 (30%), Positives = 47/78 (60%)

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF 568
           +++HRDLK++N+ L      K+ DFG ++ +    +    +   GT  Y+APE     ++
Sbjct: 189 KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRY 248

Query: 569 SVKSDVFSFGILLLEIVS 586
           S K+D++S G++L E+++
Sbjct: 249 SKKADMWSLGVILYELLT 266

Length = 478

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 2e-06
 Identities = 63/250 (25%), Positives = 99/250 (39%), Gaps = 64/250 (25%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKE----LKNEIILFSKLQ 441
           D+F   K +G G FG V      D   I A+K+L K SE   KE    ++ E  + ++  
Sbjct: 1   DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRK-SEMLEKEQVAHVRAERDILAEAD 59

Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-------DSFIFDQERCKLLDWSKRFHIIC 493
           +  +VKL       E  L LI E++P   +       D+F  ++          RF+I  
Sbjct: 60  NPWVVKLY-YSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEE---------TRFYI-- 107

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD----------E 543
             A  +L +    +L  IHRD+K  N+LLD   + K+SDFGL                  
Sbjct: 108 --AETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSH 165

Query: 544 TEGNTNR--------------------------VVGTYGYMAPEYASDGQFSVKSDVFSF 577
              +                              VGT  Y+APE      ++ + D +S 
Sbjct: 166 ALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSL 225

Query: 578 GILLLEIVSG 587
           G+++ E++ G
Sbjct: 226 GVIMYEMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 49.3 bits (117), Expect = 4e-06
 Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 43/238 (18%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K +G G FG V      D   + A+K L K   + ++ +  ++ E  +  +   
Sbjct: 1   EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS 60

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +VK+           LI EF+P   + + +  ++   L +   +F+I    A  +L +
Sbjct: 61  LWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKD--TLTEEETQFYI----AETVLAI 114

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA----------------RAFGGDETEG 546
               +L  IHRD+K  N+LLD   + K+SDFGL                  +   D T  
Sbjct: 115 DSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQ 174

Query: 547 NTN-----------------RVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           N N                   VGT  Y+APE      ++   D +S G+++ E++ G
Sbjct: 175 NMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 48.5 bits (115), Expect = 7e-06
 Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 43/238 (18%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           D+F   K +G G FG V      D   I A+K L K   + ++ +  ++ E  +  +   
Sbjct: 1   DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG 60

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +VK+           LI EF+P   + + +  ++   L + + +F+I    A  +L +
Sbjct: 61  AWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKD--TLSEEATQFYI----AETVLAI 114

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG----------------GDETEG 546
               +L  IHRD+K  N+LLD   + K+SDFGL                      D +  
Sbjct: 115 DAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQ 174

Query: 547 NTN-----------------RVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           N N                   VGT  Y+APE      ++   D +S G+++ E++ G
Sbjct: 175 NMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 47.2 bits (112), Expect = 1e-05
 Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 36/213 (16%)

Query: 395 LGEGGFGPVYKGTLAD-----------EQEIAVKRLSKISEQGLKELKNEII----LFSK 439
           LG G    +Y G L             E+EI V  + K+ +   +++         +  +
Sbjct: 3   LGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKV--ILKVLDPSHRDISLAFFETASMMRQ 60

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           + H+++V L G C+   E +++ EF+    LD F+  +       W  +F +    A  L
Sbjct: 61  VSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPW--KFKVAKQLASAL 118

Query: 500 LYLHQDSRLRIIHRDLKASNVLL-----DQDMNP--KISDFGLARAFGGDETEGNTNRVV 552
            YL +D  L  +H ++   N+LL     D +  P  K+SD G+        T  +    V
Sbjct: 119 SYL-EDKDL--VHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI------TVLSRQECV 169

Query: 553 GTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEI 584
               ++APE   D +  S+ +D +SFG  L EI
Sbjct: 170 ERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 48.3 bits (115), Expect = 1e-05
 Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 44/172 (25%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNE--------- 433
           + F I K +  G FG VY G   +  ++ AVK + K   I++  + +++ E         
Sbjct: 4   EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKS 63

Query: 434 ---IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDW 485
              + L+  LQ  N V             L+ E++    + S +     FD+E       
Sbjct: 64  PFIVHLYYSLQSANNV------------YLVMEYLIGGDVKSLLHIYGYFDEE------- 104

Query: 486 SKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 537
               +I    A  L YLH+     IIHRDLK  N+L+  + + K++DFGL++
Sbjct: 105 MAVKYI-SEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 1e-05
 Identities = 62/257 (24%), Positives = 96/257 (37%), Gaps = 69/257 (26%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K +G+G FG V      D  +I A+K L K     +  L  +K E  + ++   
Sbjct: 1   EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS 60

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSL-------DSFIFDQERCKLLDWSKRFHIICGT 495
             +V L       +   LI EF+P   L       D+F  D           RF++    
Sbjct: 61  PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSED---------VTRFYM---- 107

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--------------GG 541
           A  +L +    +L  IHRD+K  N+L+D+  + K+SDFGL+  F              G 
Sbjct: 108 AECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGK 167

Query: 542 DETEGNTNR-------------------------------VVGTYGYMAPEYASDGQFSV 570
                  NR                                VGT  Y+APE      +  
Sbjct: 168 SNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQ 227

Query: 571 KSDVFSFGILLLEIVSG 587
           + D +S G ++ E + G
Sbjct: 228 ECDWWSLGAIMFECLIG 244

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 1e-05
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 10/106 (9%)

Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 547
           RF++    A  +L +    +L  +HRD+K  NVLLD++ + +++DFG       D T   
Sbjct: 105 RFYL----AEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV-Q 159

Query: 548 TNRVVGTYGYMAPEY-----ASDGQFSVKSDVFSFGILLLEIVSGK 588
           +N  VGT  Y++PE         G++  + D +S G+ + E++ G+
Sbjct: 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGE 205

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 17/149 (11%)

Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV--KLLG 450
           K L  G    VY     DE +  +K      +   +E +  I+    L  + L   K+L 
Sbjct: 4   KLLKGGLTNRVYLLGTKDE-DYVLKINPSREKGADREREVAILQL--LARKGLPVPKVLA 60

Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY-LHQDSRLR 509
                    L+ E++  ++LD    +++             I      LL  LHQ   L 
Sbjct: 61  SGESDGWSYLLMEWIEGETLDEVSEEEKE-----------DIAEQLAELLAKLHQLPLLV 109

Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARA 538
           + H DL   N+L+D      I D+  A  
Sbjct: 110 LCHGDLHPGNILVDDGKILGIIDWEYAGY 138

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 19/157 (12%)

Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           L S++ H +L  + G C+ G E +++ EF+ +  LD  +  ++    + W  +  +    
Sbjct: 69  LMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KITVAQQL 126

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVL-----LDQDMNP--KISDFGLARAFGGDETEGNT 548
           A  L YL   +   ++H ++ A N+L     L +  +P  K+SD G+  +F     E   
Sbjct: 127 ASALSYLEDKN---LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGV--SFTALSREERV 181

Query: 549 NRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEI 584
            R+     ++APE    G   S  +D +SFG  LLEI
Sbjct: 182 ERI----PWIAPECVPGGNSLSTAADKWSFGTTLLEI 214

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 46.3 bits (110), Expect = 3e-05
 Identities = 55/250 (22%), Positives = 96/250 (38%), Gaps = 61/250 (24%)

Query: 389 FSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQHRN 444
           F   K +G G FG V      D   + A+K L K   +       +K E  + ++  +  
Sbjct: 3   FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEW 62

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSF-----IFDQERCKLLDWSKRFHIICGTARGL 499
           +VKL       +    + +++P   + S      IF+++         RF+I    A   
Sbjct: 63  VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLA-------RFYI----AELT 111

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF-----------GG------- 541
             +    ++  IHRD+K  N+L+D+D + K++DFGL   F           G        
Sbjct: 112 CAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSM 171

Query: 542 ---DETEGNTNR--------------------VVGTYGYMAPEYASDGQFSVKSDVFSFG 578
              +E                           +VGT  Y+APE      ++   D +S G
Sbjct: 172 EPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 231

Query: 579 ILLLEIVSGK 588
           ++L E++ G+
Sbjct: 232 VILYEMLVGQ 241

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 45.8 bits (108), Expect = 5e-05
 Identities = 60/283 (21%), Positives = 123/283 (43%), Gaps = 53/283 (18%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++F I K +G G FG           E+AV +L    +    ++ N+  +  + +     
Sbjct: 1   EDFEILKVIGRGAFG-----------EVAVVKLKNADKVFAMKILNKWEMLKRAETACFR 49

Query: 447 KLLGCCIHGEEK---LLIYEFMPNKSL----DSFI-------FDQERCKLLDWSKRFHII 492
           +     ++G+ +    L Y F    +L    D ++         +   +L +   RF++ 
Sbjct: 50  EERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYL- 108

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
              A  ++ +    +L  +HRD+K  N+L+D + + +++DFG       D T   ++  V
Sbjct: 109 ---AEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-QSSVAV 164

Query: 553 GTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW 607
           GT  Y++PE         G++  + D +S G+ + E++ G+    FY      +L+    
Sbjct: 165 GTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP--FYAE----SLVETYG 218

Query: 608 KLWNEG----MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQY 646
           K+ N       P+Q+ D     S +  ++IR     L+C +++
Sbjct: 219 KIMNHKERFQFPAQVTDV----SEDAKDLIR----RLICSREH 253

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 44.7 bits (106), Expect = 7e-05
 Identities = 47/197 (23%), Positives = 95/197 (48%), Gaps = 24/197 (12%)

Query: 403 VYKGTLADEQEIAVKRLSKISEQGLKEL----KNEIILFSKLQHRNLVKLLGCCIHGEEK 458
           +YKG   ++ E+ ++   K   +G K L    +NEI    ++   N++K+ G  I   + 
Sbjct: 36  IYKGIFNNK-EVIIRTFKK-FHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDD 93

Query: 459 L----LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ-DSRLRIIHR 513
           L    LI E+     L   + D+E  K L +  +  +     +GL  L++  ++    ++
Sbjct: 94  LPRLSLILEYCTRGYLREVL-DKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNK---PYK 147

Query: 514 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD--GQFSVK 571
           +L + + L+ ++   KI   GL +       + N N +V    Y + +  +D   ++++K
Sbjct: 148 NLTSVSFLVTENYKLKIICHGLEKILSSPPFK-NVNFMV----YFSYKMLNDIFSEYTIK 202

Query: 572 SDVFSFGILLLEIVSGK 588
            D++S G++L EI +GK
Sbjct: 203 DDIYSLGVVLWEIFTGK 219

Length = 283

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 45.0 bits (106), Expect = 1e-04
 Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 55/245 (22%)

Query: 393 KKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKL 448
           K LG G FG V      D   + A+K L K   ++   +  +K E  + ++  +  +VKL
Sbjct: 7   KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKL 66

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
                  +    + +++P   + S +   E     +   RF+I    A   L +    ++
Sbjct: 67  YYSFQDKDNLYFVMDYIPGGDMMSLLIRME--VFPEVLARFYI----AELTLAIESVHKM 120

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFG---------------------------- 540
             IHRD+K  N+L+D D + K++DFGL   F                             
Sbjct: 121 GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDV 180

Query: 541 -----GDETEGNTNR------------VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLE 583
                GD  +    R            +VGT  Y+APE      ++   D +S G++L E
Sbjct: 181 SNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE 240

Query: 584 IVSGK 588
           ++ G+
Sbjct: 241 MLVGQ 245

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 44.8 bits (106), Expect = 1e-04
 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 40/181 (22%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKR--LSKISEQGLKELKNEIILFSKLQHRN 444
           D+F + KKLGEG FG VYK +L ++Q     +  L K +E G      EI +  +++ R 
Sbjct: 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG----AVEIWMNERVR-RA 186

Query: 445 LVKLLGCCIHG-------------------EEKLLIYEFMPNK----SLDSFIFDQERCK 481
                   ++G                   E +  + + M +K    +++ ++   +   
Sbjct: 187 CPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLL-GKVQD 245

Query: 482 LLDWSKRFHIICGTA-RGLLY----LHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGL 535
           L    +R + I  T  R +L+    LH      I+HRD+K  N++  +     KI D G 
Sbjct: 246 LPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVKPQNIIFSEGSGSFKIIDLGA 302

Query: 536 A 536
           A
Sbjct: 303 A 303

Length = 566

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 43.6 bits (103), Expect = 2e-04
 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 16/106 (15%)

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR----AFGGDETEGNTNR 550
           T   L YLH      I+HRDLK  N+L+    + K++DFGL++    +   +  EG+  +
Sbjct: 110 TVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEK 166

Query: 551 ---------VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
                    V GT  Y+APE      +    D ++ GI+L E + G
Sbjct: 167 DTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVG 212

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 43.0 bits (101), Expect = 5e-04
 Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 21/200 (10%)

Query: 389 FSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           F+I++ L  G  G V++ +  D  Q + VK     S        +E  L  +L H  ++ 
Sbjct: 171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSV------HEARLLRRLSHPAVLA 224

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL----YLH 503
           LL   + G    L+   +P    D + +   R + L  ++    +   AR LL    Y+H
Sbjct: 225 LLDVRVVGGLTCLV---LPKYRSDLYTYLGARLRPLGLAQ----VTAVARQLLSAIDYIH 277

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
            +    IIHRD+K  NVL++   +  + DFG A    G  +      + GT    APE  
Sbjct: 278 GEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVL 334

Query: 564 SDGQFSVKSDVFSFGILLLE 583
           +   ++   D++S G+++ E
Sbjct: 335 AGDPYTPSVDIWSAGLVIFE 354

Length = 461

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 41.5 bits (97), Expect = 0.001
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 45/127 (35%)

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF----------GGDETEGNT-------- 548
           ++  IHRD+K  N+L+D+D + K++DFGL   F           GD    ++        
Sbjct: 119 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWG 178

Query: 549 ---------------------------NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
                                      + +VGT  Y+APE      ++   D +S G++L
Sbjct: 179 DPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238

Query: 582 LEIVSGK 588
            E++ G+
Sbjct: 239 YEMLVGQ 245

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 39.9 bits (93), Expect = 0.003
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 8/86 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGT---LADEQE---IAVKRLSKISEQGLKE-LKNEIILFSK 439
           +  S  K LG G FG V + T   L        +AVK L   +    +E L +E+ + S 
Sbjct: 35  NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 94

Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEF 464
           L  H N+V LLG C  G   L+I E+
Sbjct: 95  LGNHINIVNLLGACTVGGPTLVITEY 120

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|219775 pfam08277, PAN_3, PAN-like domain

 Score = 36.2 bits (84), Expect = 0.004
 Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 239 TPSWVSKSMNLKECREKCLENSSCM-AYTNSD 269
           + +  + S++ ++C  KC E+S+C+ AY NS+
Sbjct: 12  SNTSSTTSLSWEDCVTKCYEDSTCVLAYFNSE 43

Length = 71

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	706
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.98
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.98
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.98
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.98
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.98
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.98
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.98
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.97
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.96
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.96
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.96
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.95
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.95
KOG1152	772	consensus Signal transduction serine/threonine kin	99.95
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.93
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.92
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.91
PRK09188	365	serine/threonine protein kinase; Provisional	99.9
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.9
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.87
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.85
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.85
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.84
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.84
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.83
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.81
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.81
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.8
PRK12274	218	serine/threonine protein kinase; Provisional	99.8
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.76
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.76
PRK10345	210	hypothetical protein; Provisional	99.76
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.76
PRK14879	211	serine/threonine protein kinase; Provisional	99.72
smart00090	237	RIO RIO-like kinase.	99.71
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.7
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.7
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.69
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.68
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.65
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.64
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.64
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.63
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.61
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.59
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.56
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.54
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.45
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.43
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.42
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.36
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.32
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.3
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.24
KOG1243	690	consensus Protein kinase [General function predict	99.14
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.14
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.12
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.08
KOG3087	229	consensus Serine/threonine protein kinase [General	99.07
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.01
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.94
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.87
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.84
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.83
COG4248	637	Uncharacterized protein with protein kinase and he	98.68
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.56
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.56
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.55
PRK09902	216	hypothetical protein; Provisional	98.48
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.47
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.47
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.42
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	98.4
PF01636	239	APH: Phosphotransferase enzyme family This family	98.24
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.2
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.19
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.15
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.08
PF11883	48	DUF3403: Domain of unknown function (DUF3403); Int	98.07
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.0
PLN02876	822	acyl-CoA dehydrogenase	97.98
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.93
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.82
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.8
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.8
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.79
PRK10593	297	hypothetical protein; Provisional	97.79
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.74
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.63
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.55
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.47
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.46
PRK05231	319	homoserine kinase; Provisional	97.25
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.22
PLN02236	344	choline kinase	97.11
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.09
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.05
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.02
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.84
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.79
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	96.76
PLN02756	418	S-methyl-5-thioribose kinase	96.72
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.44
PRK12396	409	5-methylribose kinase; Reviewed	96.41
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.25
KOG2270	520	consensus Serine/threonine protein kinase involved	96.12
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.01
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	95.87
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	95.8
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.74

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-54  Score=452.92  Aligned_cols=290  Identities=43%  Similarity=0.751  Sum_probs=256.6

Q ss_pred             CCCcccHHHHHHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEE
Q 005236          373 DLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCC  452 (706)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  452 (706)
                      ....|++.++..++++|.-.+.||+|+||.||+|.+.++..||||++.....+...+|.+|+.++.+++|||||+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            45669999999999999999999999999999999999999999998765443145699999999999999999999999


Q ss_pred             EeCC-eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEe
Q 005236          453 IHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS  531 (706)
Q Consensus       453 ~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~  531 (706)
                      .+.+ +++||||||++|+|.++|+..... .++|..|++||.++|+||+|||+...++||||||||+|||||+++++||+
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence            9999 599999999999999999876544 78999999999999999999999988899999999999999999999999


Q ss_pred             eeccccccCCCCCccccccc-ccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          532 DFGLARAFGGDETEGNTNRV-VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      |||+|+.....  ....... .||.+|+|||++..+..+.|+|||||||+|+||+||+++.+...+.....++.|++..+
T Consensus       220 DFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~  297 (361)
T KOG1187|consen  220 DFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL  297 (361)
T ss_pred             CccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence            99999664321  1111112 79999999999999999999999999999999999999887655555666899999999


Q ss_pred             hcCCCccccccccc-CcCCH-HHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          611 NEGMPSQLIDACFK-DSFNL-AEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       611 ~~~~~~~~~d~~~~-~~~~~-~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      ..+...+++|+.+. +.... +++.+++.++++|++.+|.+||+|.||+++|+.+..
T Consensus       298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            99999999999987 56664 789999999999999999999999999999966533

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-46  Score=388.72  Aligned_cols=256  Identities=32%  Similarity=0.516  Sum_probs=208.6

Q ss_pred             CCCccceeccCCceeEEEEEeCCCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-eeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-EKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~  464 (706)
                      ++.+.+.||+|+||+||+|.+.....||||++....  ....+.|.+|+.++.+++|||||+++|+|.+.. ...+||||
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy  121 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY  121 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence            445557799999999999999766669999997632  222679999999999999999999999999888 79999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-CeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfgla~~~~~~~  543 (706)
                      |++|+|.++++.. ....+++..+++|+.+||+||.|||+++.  ||||||||+||||+.++ ++||+|||+++......
T Consensus       122 ~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~  198 (362)
T KOG0192|consen  122 MPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK  198 (362)
T ss_pred             CCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence            9999999999775 34679999999999999999999999864  99999999999999998 99999999998754321


Q ss_pred             CcccccccccccCccCccccc--cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYAS--DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~--~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                        .......||..|||||++.  ...|+.|+||||||++||||+||+.||.....   ...   +...........+...
T Consensus       199 --~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~---~~~---~~~v~~~~~Rp~~p~~  270 (362)
T KOG0192|consen  199 --TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP---VQV---ASAVVVGGLRPPIPKE  270 (362)
T ss_pred             --ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH---HHH---HHHHHhcCCCCCCCcc
Confidence              2222367999999999999  56999999999999999999999999875443   111   2222222222222221


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                               ....+..++.+||+.||..||++.+++..|+.+
T Consensus       271 ---------~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~  303 (362)
T KOG0192|consen  271 ---------CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI  303 (362)
T ss_pred             ---------CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence                     223456788899999999999999999999865

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-45  Score=364.03  Aligned_cols=252  Identities=28%  Similarity=0.387  Sum_probs=207.9

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-eeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-EKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e  463 (706)
                      ++++..+.||+|..|+|||++++ .++.+|+|++.. ..+...+++.+|++++++.+|||||+++|+|.... ...++||
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE  158 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME  158 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence            35666789999999999999995 477889999854 45666789999999999999999999999999988 5999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      ||++|+|++++...   +.+++...-+|+.++++||.|||+..  .||||||||+||||+..|.+||+|||.++.+.+. 
T Consensus       159 YMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-  232 (364)
T KOG0581|consen  159 YMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-  232 (364)
T ss_pred             hcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence            99999999999654   45889999999999999999999732  3999999999999999999999999999987433 


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--CCCchhHHHHHHHHhhcCCCcccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYH--SDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                         ..+..+||..|||||.+.+..|+.++||||||++++|+.+|+.|+....  .....++...    +-.+.++.+.+.
T Consensus       233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~----Iv~~ppP~lP~~  305 (364)
T KOG0581|consen  233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCA----IVDEPPPRLPEG  305 (364)
T ss_pred             ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHH----HhcCCCCCCCcc
Confidence               4456899999999999999999999999999999999999999976541  1222222222    223333333222


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          .+.    .++.+++..||+.||.+||+++|+++.
T Consensus       306 ----~fS----~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  306 ----EFS----PEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             ----cCC----HHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                122    256789999999999999999999753

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-45  Score=365.61  Aligned_cols=201  Identities=31%  Similarity=0.516  Sum_probs=181.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ..+|.+.++||+|+|++||+|+++ ++..||||.+.+.  ..+..+.+..|+++|+.++|||||+|++++..++..+|||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            468999999999999999999984 4789999998764  6777888999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC------CCeEEeeeccc
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD------MNPKISDFGLA  536 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~------~~~kl~Dfgla  536 (706)
                      |||.||+|.+||+...   .+++.....++.|||.||++||+++   ||||||||+||||+..      -.+||+|||+|
T Consensus        89 EyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA  162 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFA  162 (429)
T ss_pred             EeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence            9999999999997654   5899999999999999999999998   9999999999999865      46899999999


Q ss_pred             cccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYH  595 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~  595 (706)
                      +.+..   .......+|++-|||||++...+|+.|+|+||+|+|||++++|+.||....
T Consensus       163 R~L~~---~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t  218 (429)
T KOG0595|consen  163 RFLQP---GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET  218 (429)
T ss_pred             hhCCc---hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence            98753   233445799999999999999999999999999999999999999986433

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-44  Score=377.70  Aligned_cols=247  Identities=28%  Similarity=0.417  Sum_probs=209.9

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc---cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ..|...+.||+|||+.||+++. ..|+.||+|++.+   ......+.+.+|+++.++|+|||||+++++|++.+..|+|.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5799999999999999999998 7799999999976   24455678899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      |+|++++|.+++.   +.+.+++.++.++..||+.||.|||+.+   |+|||||..|+||+++.++||+|||||..+..+
T Consensus        98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~  171 (592)
T KOG0575|consen   98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD  171 (592)
T ss_pred             EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence            9999999999985   4567999999999999999999999998   999999999999999999999999999988644


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      ..  .....+|||.|+|||++.....+..+||||+|||+|-||.|++||+...-.+....+..    -....+..+    
T Consensus       172 ~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~----~~Y~~P~~l----  241 (592)
T KOG0575|consen  172 GE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL----NEYSMPSHL----  241 (592)
T ss_pred             cc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh----cCccccccc----
Confidence            33  33458999999999999999999999999999999999999999875332222222211    111112111    


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                               ...+.+|+..+|+.+|.+|||+++|+.
T Consensus       242 ---------s~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  242 ---------SAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             ---------CHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                     124567899999999999999999985

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-45  Score=381.09  Aligned_cols=256  Identities=32%  Similarity=0.506  Sum_probs=210.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      +.+++.++||+|.||.||.|.++....||+|.++.. ....+.|.+|+.+|++|+|+|||+++++|..++.++||||||+
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~  284 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP  284 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence            345567899999999999999988889999998654 2334678899999999999999999999999899999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      .|+|.+||.. .....+...+.+.++.|||+||+||++++   +|||||.++||||+++..+||+|||||+.+..+.+..
T Consensus       285 ~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~  360 (468)
T KOG0197|consen  285 KGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA  360 (468)
T ss_pred             cCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence            9999999976 33466889999999999999999999988   9999999999999999999999999999655444432


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                       .....-+..|.|||.+....++.|||||||||+||||+| |+.|+......+..+.+..   ..+-+.+..        
T Consensus       361 -~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~---GyRlp~P~~--------  428 (468)
T KOG0197|consen  361 -SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLER---GYRLPRPEG--------  428 (468)
T ss_pred             -cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhc---cCcCCCCCC--------
Confidence             223445789999999999999999999999999999999 7878655444333333222   221111111        


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                           ....+.+|+..||+.+|++|||++.+...|+...
T Consensus       429 -----CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  429 -----CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             -----CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence                 2235667999999999999999999999988653

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.9e-45  Score=365.31  Aligned_cols=252  Identities=25%  Similarity=0.342  Sum_probs=201.5

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchh-------hHHHHHHHHHHHhhcCCcceeeeEeEEEeCC
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQ-------GLKELKNEIILFSKLQHRNLVKLLGCCIHGE  456 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  456 (706)
                      ..+.|.+.+.||+|+||.|-+|.. +.++.||||++++....       ......+|+++|++|+|||||++++++...+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            456788999999999999999987 56999999999763111       1234579999999999999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC---CCeEEeee
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDF  533 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~---~~~kl~Df  533 (706)
                      ..||||||++||.|.+++-.+.   .+.+..-..++.|++.|+.|||++|   |+||||||+|||+..+   ..+||+||
T Consensus       250 s~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDF  323 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDF  323 (475)
T ss_pred             ceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEeccc
Confidence            9999999999999999996654   3666677789999999999999999   9999999999999766   78999999


Q ss_pred             ccccccCCCCCcccccccccccCccCccccccCCC---CcchhhHHHHHHHHHHHhCCCCCCCCCCCC-chhHHHHHHHH
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF---SVKSDVFSFGILLLEIVSGKKNRGFYHSDN-KLNLIRHAWKL  609 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---s~~sDv~SlGvil~elltG~~p~~~~~~~~-~~~~~~~~~~~  609 (706)
                      |+|+..+.   .......+||+.|.|||++.+...   ..+.|+||+|||||-+|+|.+||.....+. ..+.+..    
T Consensus       324 GlAK~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~----  396 (475)
T KOG0615|consen  324 GLAKVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK----  396 (475)
T ss_pred             chhhcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc----
Confidence            99998752   234556899999999999987643   347899999999999999999997654443 2222221    


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                         +...  +.+    ....+-..+..+++.+||..||++|||+.|+++
T Consensus       397 ---G~y~--f~p----~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  397 ---GRYA--FGP----LQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             ---Cccc--ccC----hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence               1110  000    001122346778999999999999999999975

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.5e-44  Score=392.72  Aligned_cols=260  Identities=30%  Similarity=0.469  Sum_probs=217.0

Q ss_pred             cCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCccchh-hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      .+.+..+.||+|+||+||+|+..      +.+.||||.++..... ..++|++|+++++.++|||||+|+|+|.+++..+
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~  565 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC  565 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence            45666799999999999999853      3567999999875544 7889999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhccc-------c----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          460 LIYEFMPNKSLDSFIFDQE-------R----CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~-------~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      +|+|||..|+|.+||....       .    ...++..+.+.||.|||.||+||-++.   +|||||..+|+||.++..+
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~V  642 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVV  642 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEE
Confidence            9999999999999997421       1    234888999999999999999999887   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+||||++.+.+.++........-+++|||||.|..++||.+||||||||+|||+++ |+.|+.....++-.+.     
T Consensus       643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~-----  717 (774)
T KOG1026|consen  643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIEC-----  717 (774)
T ss_pred             EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHH-----
Confidence            9999999998876666554444556899999999999999999999999999999999 8888766554433222     


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                        +..+..-+-.+         ....++..|+..||+.+|.+||+++||-..|+....
T Consensus       718 --i~~g~lL~~Pe---------~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  718 --IRAGQLLSCPE---------NCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             --HHcCCcccCCC---------CCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence              23333322222         233467889999999999999999999999986543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.7e-45  Score=345.75  Aligned_cols=259  Identities=27%  Similarity=0.400  Sum_probs=208.0

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEe-EEEeCCe-eEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLG-CCIHGEE-KLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~lV  461 (706)
                      .+|.+.++||+|.||+|||++. .+|..+|.|.+.-  .+.+..+.+..|+.+|++|+|||||++++ -+.+... +++|
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            4688999999999999999986 6799999999863  45566778999999999999999999998 5555554 8999


Q ss_pred             EecCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          462 YEFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQDS-RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      |||+..|+|...|... +..+.+++..+++++.|++.||..+|.+- +..|+||||||.||+|+.+|.+||+|||+++.+
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            9999999999999753 34567899999999999999999999842 234999999999999999999999999999998


Q ss_pred             CCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      .+...  .....+|||.||+||.+.+.+|+.||||||+||++|||..-+.||...   +-.++-    +.+..+..+.+.
T Consensus       179 ~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~---n~~~L~----~KI~qgd~~~~p  249 (375)
T KOG0591|consen  179 SSKTT--FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD---NLLSLC----KKIEQGDYPPLP  249 (375)
T ss_pred             cchhH--HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc---cHHHHH----HHHHcCCCCCCc
Confidence            65433  334478999999999999999999999999999999999999998643   222222    222333333232


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      +..        -...+..++..|+..||+.||+.-.+++.+..
T Consensus       250 ~~~--------YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  250 DEH--------YSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HHH--------hhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            211        12244567789999999999996666655554

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-43  Score=348.80  Aligned_cols=240  Identities=27%  Similarity=0.381  Sum_probs=199.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.++||+|+||+||.++.++ ++.+|+|++++.   .....+..++|..++.+++||+||+++-.|++.+.+|+|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            4789999999999999999999855 788999999763   334577889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      +||+.||.|..+|.++.   .+++..+..++.+|+.||.|||+++   ||||||||+|||||++|+++|+|||+++....
T Consensus       104 ld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~  177 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK  177 (357)
T ss_pred             EeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence            99999999999996544   4788888999999999999999998   99999999999999999999999999996432


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC--CCcccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG--MPSQLI  619 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  619 (706)
                      +  ...+...+||+.|||||++....|+..+|.||+|+++|||++|.+||...+.....+.      .....  ..+..+
T Consensus       178 ~--~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~------I~~~k~~~~p~~l  249 (357)
T KOG0598|consen  178 D--GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDK------ILKGKLPLPPGYL  249 (357)
T ss_pred             C--CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHH------HhcCcCCCCCccC
Confidence            2  2344458999999999999999999999999999999999999999864332211111      11111  111111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP  651 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  651 (706)
                      +            ..+.+++...|+.+|++|-
T Consensus       250 s------------~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  250 S------------EEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             C------------HHHHHHHHHHhccCHHHhc
Confidence            1            2455788899999999995

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-41  Score=350.49  Aligned_cols=267  Identities=26%  Similarity=0.366  Sum_probs=212.4

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  459 (706)
                      ...+|.+++.||+|+|++|++|+.+ .++++|||++.+.   .+.-.+-+..|-..|.+| .||.|++|+-.|.+...+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            3468999999999999999999985 4889999999652   333345567888999999 8999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +|+||+++|+|.++|.+.   ..+++.....++.+|+.||+|||+.|   ||||||||+|||||+||++||+|||.|+.+
T Consensus       151 FvLe~A~nGdll~~i~K~---Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKY---GSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             EEEEecCCCcHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccC
Confidence            999999999999999654   45888889999999999999999998   999999999999999999999999999998


Q ss_pred             CCCCCc---------ccc--cccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHH
Q 005236          540 GGDETE---------GNT--NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK  608 (706)
Q Consensus       540 ~~~~~~---------~~~--~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  608 (706)
                      ......         ...  ...+||..|.+||++.....+..+|+|+||||||+|+.|++||....+   .........
T Consensus       225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne---yliFqkI~~  301 (604)
T KOG0592|consen  225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE---YLIFQKIQA  301 (604)
T ss_pred             ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH---HHHHHHHHH
Confidence            543222         111  347899999999999999999999999999999999999999864332   111111111


Q ss_pred             HhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh-------cCCCCCCCCCCCCc
Q 005236          609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML-------GSEIVLPQPKQPGY  674 (706)
Q Consensus       609 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L-------~~~~~~~~p~~p~~  674 (706)
                       +.-..+         ..+.    ..+.+|+...|-.||.+|+|.++|-+..       +.+....+|+.-++
T Consensus       302 -l~y~fp---------~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~nlw~~~PP~l~py  360 (604)
T KOG0592|consen  302 -LDYEFP---------EGFP----EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWENLWQQTPPKLQPY  360 (604)
T ss_pred             -hcccCC---------CCCC----HHHHHHHHHHHccCccccccHHHHhhCcccccCChhhhhhcCCCcccCC
Confidence             111111         1111    2455788899999999999999998764       33344555554444

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-41  Score=343.72  Aligned_cols=257  Identities=28%  Similarity=0.410  Sum_probs=204.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC--eeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE--EKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV~e  463 (706)
                      .+|...+.||+|+||.||++...+ |...|||.+........+.+.+|+.+|.+++|||||+.+|......  .++++||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            467888999999999999999865 8899999986653333778999999999999999999999855554  6899999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-CCCeEEeeeccccccCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGD  542 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgla~~~~~~  542 (706)
                      |+++|+|.+++.+...  .+++..+.++..||++||+|||+++   |+||||||+||||+. ++.+||+|||+++.....
T Consensus        97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~  171 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESK  171 (313)
T ss_pred             ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence            9999999999976543  5899999999999999999999998   999999999999999 799999999999987541


Q ss_pred             -CCcccccccccccCccCccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          543 -ETEGNTNRVVGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       543 -~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                       ..........||+.|||||++.++. ...++|||||||++.||+||++||...     .....+..........+.+.+
T Consensus       172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~P~ip~  246 (313)
T KOG0198|consen  172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGREDSLPEIPD  246 (313)
T ss_pred             cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccCCCCCCCc
Confidence             1122334578999999999999643 335999999999999999999998653     111222222222222222222


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      .     .    .....+++..|++.+|++|||+.++++..--
T Consensus       247 ~-----l----s~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~  279 (313)
T KOG0198|consen  247 S-----L----SDEAKDFLRKCFKRDPEKRPTAEELLEHPFL  279 (313)
T ss_pred             c-----c----CHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence            1     1    1245578899999999999999999987643

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-42  Score=369.84  Aligned_cols=259  Identities=27%  Similarity=0.426  Sum_probs=214.4

Q ss_pred             CCCccceeccCCceeEEEEEeCC----CcEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ...|.++||.|.||.|++|+++-    ...||||.|+. ..++....|..|+.+|.+++||||++|.|+.......++|.
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            45677999999999999999843    45799999986 45667789999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      |||+||+|+.||+.+.  ..+.+.++.-++++||.||+||-+.+   +|||||.++||||+.+..+|++|||+++.+..+
T Consensus       710 EyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd  784 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  784 (996)
T ss_pred             hhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccC
Confidence            9999999999997665  44888889999999999999999988   999999999999999999999999999988655


Q ss_pred             CC-cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          543 ET-EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       543 ~~-~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      .. ...+....-+.+|.|||.|...++|.+|||||||+++||.++ |++|+-.+...+   .+....+-++-        
T Consensus       785 ~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd---VIkaIe~gyRL--------  853 (996)
T KOG0196|consen  785 PEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD---VIKAIEQGYRL--------  853 (996)
T ss_pred             CCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH---HHHHHHhccCC--------
Confidence            42 222233344689999999999999999999999999999888 999975444332   22222221111        


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLP  667 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~~  667 (706)
                           ..+++....+.+|++.|||+|-.+||.+.+|+.+|.+.+..|
T Consensus       854 -----PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP  895 (996)
T KOG0196|consen  854 -----PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP  895 (996)
T ss_pred             -----CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence                 122234456778999999999999999999999998875554

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=2e-41  Score=324.84  Aligned_cols=263  Identities=22%  Similarity=0.297  Sum_probs=205.9

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      +.|+..-++|+|+||+|||++.++ |+.||||++...  ++...+-..+|+.++++++|||+|.|+.+|.....++||+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            467888899999999999999966 899999998543  34445677899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      ||+..-|.++-+.   ..-++...+.+++.|+++|+.|+|+++   +|||||||+||||+.+|.+||+|||+|+.+..  
T Consensus        82 ~~dhTvL~eLe~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--  153 (396)
T KOG0593|consen   82 YCDHTVLHELERY---PNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA--  153 (396)
T ss_pred             ecchHHHHHHHhc---cCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC--
Confidence            9988777665432   234788889999999999999999998   99999999999999999999999999998852  


Q ss_pred             CcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh---------cC
Q 005236          544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN---------EG  613 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~---------~~  613 (706)
                      .....+..+.|..|.|||.+.+ .+|....||||+||++.||++|.+-|...+.-+.+.+|......+.         .+
T Consensus       154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~  233 (396)
T KOG0593|consen  154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP  233 (396)
T ss_pred             CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence            2233455789999999999987 6899999999999999999999988765554444444443322111         11


Q ss_pred             CCcccccccccCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          614 MPSQLIDACFKDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       614 ~~~~~~d~~~~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                      ....+.=+.+....+++     -..-+++++..||+.||.+|++-++++
T Consensus       234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL  282 (396)
T ss_pred             ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence            11111111111111111     112467899999999999999999986

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-41  Score=353.63  Aligned_cols=266  Identities=27%  Similarity=0.446  Sum_probs=209.8

Q ss_pred             HHHHHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe
Q 005236          380 ATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       380 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  457 (706)
                      .+.....+++.+.+.||+|.||+||+|++.+  .||||++..  ...+..+.|++|+..+++-+|.||+-++|+|.....
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~  462 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL  462 (678)
T ss_pred             cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence            3344445677788999999999999999965  599999865  455678999999999999999999999999988777


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                       .+|..+|+|.+|+.+|+..+  ..++..+.+.||.|||+||.|||.++   |||||||..||++.+++.+||+||||+.
T Consensus       463 -AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLat  536 (678)
T KOG0193|consen  463 -AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLAT  536 (678)
T ss_pred             -eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEeccccee
Confidence             99999999999999997654  34788889999999999999999998   9999999999999999999999999986


Q ss_pred             ccCCCCCcccccccccccCccCccccccC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDG---QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      .-..-..........|...|||||+++..   +|+..+||||||+|+|||++|..|+.....+.....+      -+...
T Consensus       537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV------GrG~l  610 (678)
T KOG0193|consen  537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV------GRGYL  610 (678)
T ss_pred             eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe------ccccc
Confidence            53222122223345688999999999754   7999999999999999999999998733322221111      11111


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      .++....      .-....+|.+|+..||..++++||.+.+|+.+|+.+..
T Consensus       611 ~pd~s~~------~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  611 MPDLSKI------RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             Cccchhh------hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            1111110      01123356678889999999999999999998887644

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=3.1e-40  Score=351.43  Aligned_cols=261  Identities=30%  Similarity=0.446  Sum_probs=203.0

Q ss_pred             ccCCCccceeccCCceeEEEEEe------CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCC-
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGE-  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~-  456 (706)
                      .++|++.++||+|+||.||+|..      ..+..||||++... .....+.+.+|+.++.++ +||||+++++++...+ 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            46899999999999999999974      22467999998653 233456789999999999 8999999999887644 


Q ss_pred             eeEEEEecCCCCChhhhhhcccc---------------------------------------------------------
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQER---------------------------------------------------------  479 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------  479 (706)
                      ..++||||+++|+|.+++.....                                                         
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            57899999999999999964321                                                         


Q ss_pred             --cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCc
Q 005236          480 --CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY  557 (706)
Q Consensus       480 --~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y  557 (706)
                        ...+++..++.++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.............++..|
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y  242 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW  242 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence              134778888999999999999999987   999999999999999999999999999875433222222234567889


Q ss_pred             cCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHH
Q 005236          558 MAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCI  636 (706)
Q Consensus       558 ~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  636 (706)
                      +|||++.+..++.++||||||++||||++ |+.||.......  ..    ......+......     ..    ....+.
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~----~~~~~~~~~~~~~-----~~----~~~~l~  307 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EF----CQRLKDGTRMRAP-----EN----ATPEIY  307 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HH----HHHHhcCCCCCCC-----CC----CCHHHH
Confidence            99999999999999999999999999997 999976433211  11    1111111111110     01    112466


Q ss_pred             HHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          637 HIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       637 ~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      +++.+||+.+|.+|||+.||++.|+.+.
T Consensus       308 ~li~~cl~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         308 RIMLACWQGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            7999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6e-40  Score=330.44  Aligned_cols=263  Identities=25%  Similarity=0.363  Sum_probs=207.6

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ..++|++.++||.|..++||+|+. ..+..||||++.-. .....+.+.+|+..++.++||||++++..|..+..+++||
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            346899999999999999999987 55789999998653 2334789999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      .||.+|++.+++...-. .-+++..+..|+.++++||.|||.+|   .||||||+.||||+++|.+||+|||.+..+...
T Consensus       104 pfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             hhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence            99999999999976443 33888899999999999999999998   999999999999999999999999987765432


Q ss_pred             CCcc--cccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          543 ETEG--NTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       543 ~~~~--~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ....  .....+||+.|||||++..  ..|+.|+||||||++..||.+|+.||..+++...+      ...+....+...
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvL------l~tLqn~pp~~~  253 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVL------LLTLQNDPPTLL  253 (516)
T ss_pred             CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHH------HHHhcCCCCCcc
Confidence            2111  1155789999999999654  47999999999999999999999998766653221      111222222111


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       -..+..+.+..--..+.+++..||+.||.+|||++++++
T Consensus       254 -t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  254 -TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             -cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence             111111111111224567888999999999999999974

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.7e-40  Score=337.88  Aligned_cols=267  Identities=24%  Similarity=0.303  Sum_probs=206.1

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  460 (706)
                      .+.|+.+++||+|.||.||+|+. ..|+.||+|++....  +.......+|+.+|++|+||||++|.+...+.  ..+||
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence            35788889999999999999997 568899999987643  44556778999999999999999999998877  68899


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |+|||+. +|.-++...  .-.++..++..++.||+.||+|+|+.+   |+|||||.+|||||.+|.+||+|||||+++.
T Consensus       196 VFeYMdh-DL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~  269 (560)
T KOG0600|consen  196 VFEYMDH-DLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYT  269 (560)
T ss_pred             EEecccc-hhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeecc
Confidence            9999976 677766432  234788999999999999999999998   9999999999999999999999999999876


Q ss_pred             CCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc--c
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS--Q  617 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~  617 (706)
                      .......++ .+-|.-|.|||.+.+. .|+.+.|+||.||||.||++|++.+......+.+..|........+..+.  .
T Consensus       270 ~~~~~~~T~-rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k  348 (560)
T KOG0600|consen  270 PSGSAPYTS-RVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK  348 (560)
T ss_pred             CCCCccccc-ceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence            655444444 5669999999999875 89999999999999999999999876544444444443332211121111  0


Q ss_pred             -----cccccccCcCCHHHH-----HHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          618 -----LIDACFKDSFNLAEV-----IRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       618 -----~~d~~~~~~~~~~~~-----~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                           .+.+.-.....+.|.     ..+++|+..+|..||.+|.|+.+++..
T Consensus       349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence                 111110101112221     145788889999999999999998753

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=3.7e-40  Score=340.02  Aligned_cols=254  Identities=23%  Similarity=0.286  Sum_probs=208.6

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ..++|+++++||+|+||.||+++-++ |..+|+|++++.   .....+..+.|-.+|....+|.||+|+-.|.+.+.+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            45899999999999999999999865 888999999874   34556778899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||++||++..+|..   ...+++.....++.+++.|+..||..|   +|||||||+|+|||..|++||+||||+.-+.
T Consensus       219 iMEylPGGD~mTLL~~---~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMR---KDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             EEEecCCccHHHHHHh---cCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence            9999999999999954   356889999999999999999999998   9999999999999999999999999996431


Q ss_pred             CC----------------------CCc-----cc------------------ccccccccCccCccccccCCCCcchhhH
Q 005236          541 GD----------------------ETE-----GN------------------TNRVVGTYGYMAPEYASDGQFSVKSDVF  575 (706)
Q Consensus       541 ~~----------------------~~~-----~~------------------~~~~~gt~~y~aPE~~~~~~~s~~sDv~  575 (706)
                      ..                      ...     ..                  ....+|||.|||||++.+..|+..+|.|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW  372 (550)
T KOG0605|consen  293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW  372 (550)
T ss_pred             hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence            10                      000     00                  0024799999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC---
Q 005236          576 SFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC---  652 (706)
Q Consensus       576 SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt---  652 (706)
                      |||||+||||.|-+||....+.+....+......+.-+.-..+             ..++.+||.+||. ||++|--   
T Consensus       373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~-------------s~eA~DLI~rll~-d~~~RLG~~G  438 (550)
T KOG0605|consen  373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDL-------------SDEAKDLITRLLC-DPENRLGSKG  438 (550)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcc-------------cHHHHHHHHHHhc-CHHHhcCccc
Confidence            9999999999999999876666655555544444332222111             1466788999999 9999975   


Q ss_pred             hhHHHH
Q 005236          653 MPSVIL  658 (706)
Q Consensus       653 ~~ev~~  658 (706)
                      ++||-+
T Consensus       439 ~~EIK~  444 (550)
T KOG0605|consen  439 AEEIKK  444 (550)
T ss_pred             HHHHhc
Confidence            556554

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.7e-39  Score=340.45  Aligned_cols=264  Identities=25%  Similarity=0.406  Sum_probs=202.7

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-----------------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-----------------EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKL  448 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l  448 (706)
                      ++|++.++||+|+||.||++.+.+                 +..||+|.+... .......+.+|+.++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            578999999999999999998633                 336999998653 34445679999999999999999999


Q ss_pred             EeEEEeCCeeEEEEecCCCCChhhhhhccc----------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEe
Q 005236          449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH  512 (706)
Q Consensus       449 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH  512 (706)
                      ++++.+.+..++||||+++++|.+++....                ....+++..+++++.||+.||.|||+.+   |+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence            999999999999999999999999985432                1134678889999999999999999988   999


Q ss_pred             cccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhC--CCC
Q 005236          513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG--KKN  590 (706)
Q Consensus       513 ~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG--~~p  590 (706)
                      |||||+|||+++++.+||+|||+++.+.............++..|+|||++....++.++||||||+++|||+++  ..|
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p  241 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP  241 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence            999999999999999999999999876433322223334567899999999988999999999999999999975  455


Q ss_pred             CCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          591 RGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      +.....   ...+................. .     .......+.+++.+||+.+|.+|||+++|.+.|++
T Consensus       242 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         242 YGELTD---EQVIENAGEFFRDQGRQVYLF-R-----PPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             CCcCCH---HHHHHHHHHHhhhcccccccc-C-----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            443222   222222222221111100000 0     00112346789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-41  Score=353.64  Aligned_cols=262  Identities=31%  Similarity=0.449  Sum_probs=208.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC--C--cE-EEEEEcCc---cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD--E--QE-IAVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~--~~-vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  457 (706)
                      -++..+.++||+|+||.||+|++..  +  .. ||||..+.   ......+++.+|+++|++++|||||+++|++.....
T Consensus       156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P  235 (474)
T KOG0194|consen  156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP  235 (474)
T ss_pred             ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence            3566777999999999999999743  2  23 89998874   456778899999999999999999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      +++|||+|+||+|.++|.....  .++..+++.++.+.|+||+|||+++   +|||||.++|+|+..++.+||+|||+++
T Consensus       236 l~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~  310 (474)
T KOG0194|consen  236 LMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSR  310 (474)
T ss_pred             cEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCcccccc
Confidence            9999999999999999966543  6899999999999999999999998   9999999999999999999999999987


Q ss_pred             ccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      .-.  ..........-+.+|+|||.+....|+.++|||||||++||+++ |..|+......   ....   .....+...
T Consensus       311 ~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~~---kI~~~~~r~  382 (474)
T KOG0194|consen  311 AGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVKA---KIVKNGYRM  382 (474)
T ss_pred             CCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHHH---HHHhcCccC
Confidence            632  11111212346789999999999999999999999999999999 78886543221   1111   111222221


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCCCCC
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQP  669 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~~~p  669 (706)
                      ....      ..+.   .+..++..|++.+|++||+|.++.+.|+.+.....+
T Consensus       383 ~~~~------~~p~---~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  383 PIPS------KTPK---ELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             CCCC------CCHH---HHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence            1111      2222   344567799999999999999999999987555444

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-40  Score=369.75  Aligned_cols=258  Identities=32%  Similarity=0.496  Sum_probs=212.2

Q ss_pred             cCCCccceeccCCceeEEEEEeCC--C----cEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD--E----QEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~--~----~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      +..++.+.||+|+||.||+|...+  +    ..||||.+.+ .+.+...+|.+|..+|++++|||||+++|+|.+....+
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence            456677999999999999998743  3    3499999977 46677889999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcc----cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          460 LIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                      +++|||++|+|..||++.    .....+...+.+.++.+||+|+.||++++   +|||||..+|+||++...+||+||||
T Consensus       772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGl  848 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGL  848 (1025)
T ss_pred             EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccch
Confidence            999999999999999764    12456899999999999999999999987   99999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      |+.+...++........-+.+|||||.+..+.+|.|+|||||||+|||++| |..||...+..+   ....   ....+.
T Consensus       849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~---v~~~---~~~ggR  922 (1025)
T KOG1095|consen  849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE---VLLD---VLEGGR  922 (1025)
T ss_pred             hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH---HHHH---HHhCCc
Confidence            997665555544444456789999999999999999999999999999999 778865433221   1111   111221


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      +.          ........+.+|+..||+.+|++||++..+++.+..+
T Consensus       923 L~----------~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i  961 (1025)
T KOG1095|consen  923 LD----------PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI  961 (1025)
T ss_pred             cC----------CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence            11          1112334667899999999999999999999988766

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=7.5e-40  Score=309.15  Aligned_cols=277  Identities=27%  Similarity=0.375  Sum_probs=211.3

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchh--hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQ--GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|...++||+|.||.||+|++ ..|+.||||+++.....  ......+|+..++.++|+||+.|+++|-..+...||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            4688889999999999999997 55899999998654322  24567899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      ||+. +|...|++..  ..++...+..++.++++|++|+|.+.   |+||||||.|+|++++|.+||+|||+|+.+....
T Consensus        82 fm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             eccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence            9964 8999996544  56888999999999999999999987   9999999999999999999999999999986543


Q ss_pred             CcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh---cCCCcc--
Q 005236          544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN---EGMPSQ--  617 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~--  617 (706)
                      ....  ..+-|.-|.|||.+.+ ..|+...|+||.|||+.||+-|.+-|...   ...+......+.+.   +..+++  
T Consensus       156 ~~~~--~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~---sDidQL~~If~~LGTP~~~~WP~~~  230 (318)
T KOG0659|consen  156 RIQT--HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD---SDIDQLSKIFRALGTPTPDQWPEMT  230 (318)
T ss_pred             cccc--cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC---chHHHHHHHHHHcCCCCcccCcccc
Confidence            3222  2367899999999876 57999999999999999999998765433   33333333333322   222211  


Q ss_pred             -cccc---------cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCCCCCCCCCccc
Q 005236          618 -LIDA---------CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGYLA  676 (706)
Q Consensus       618 -~~d~---------~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~~~p~~p~~~~  676 (706)
                       +.|.         .....+ ......+++++..++..||.+|++++|++++=- ....|.|..|.-.+
T Consensus       231 ~lpdY~~~~~~P~~~~~~lf-~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y-f~~~P~pt~~~~lp  297 (318)
T KOG0659|consen  231 SLPDYVKIQQFPKPPLNNLF-PAASSDALDLLSKMLTYNPKKRITASQALKHPY-FKSLPLPTPPSKLP  297 (318)
T ss_pred             ccccHHHHhcCCCCcccccc-ccccHHHHHHHHhhhccCchhcccHHHHhcchh-hhcCCCCCChhhCc
Confidence             1110         000011 112234578999999999999999999987643 22345554444333

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-39  Score=326.62  Aligned_cols=268  Identities=29%  Similarity=0.422  Sum_probs=205.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhh--cCCcceeeeEeEEEeCC----eeE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSK--LQHRNLVKLLGCCIHGE----EKL  459 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~  459 (706)
                      .+...+.++||+|+||.||||++.+ +.||||++.   .+..+.|++|-.+++.  ++|+||++++++-..+.    +++
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhccC-ceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            3556777999999999999999954 899999985   4556678888877765  58999999999987666    889


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC------CCCceEecccCCCcEEEcCCCCeEEeee
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD------SRLRIIHRDLKASNVLLDQDMNPKISDF  533 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------~~~~ivH~Dikp~Nill~~~~~~kl~Df  533 (706)
                      ||+||.++|+|.+||..    ..++|....+|+..+++||+|||+.      .+++|+|||||++||||.+|+++.|+||
T Consensus       285 LVt~fh~kGsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF  360 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF  360 (534)
T ss_pred             EEeeeccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence            99999999999999954    4589999999999999999999975      3568999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccccCccCccccccC-CCC-----cchhhHHHHHHHHHHHhCCCCCCC------CCCCC---
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFS-----VKSDVFSFGILLLEIVSGKKNRGF------YHSDN---  598 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s-----~~sDv~SlGvil~elltG~~p~~~------~~~~~---  598 (706)
                      |+|..+........+...+||.+|||||++.+. ++.     .+.||||+|.|||||++.-.....      ..+-+   
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev  440 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV  440 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence            999998766666666668999999999999764 232     468999999999999996543311      00000   


Q ss_pred             -chhHHHHHHHHh-hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          599 -KLNLIRHAWKLW-NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       599 -~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                       ..--+...+... .+...+.+.+.....    ..+.-+.+.+..||..||+.|-|+.=|.+.+..+.-
T Consensus       441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h----~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  441 GNHPTLEEMQELVVRKKQRPKIPDAWRKH----AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             cCCCCHHHHHHHHHhhccCCCChhhhhcC----ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence             000011122211 222223333333322    334456778899999999999999999988877643

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-40  Score=314.06  Aligned_cols=236  Identities=26%  Similarity=0.318  Sum_probs=195.9

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||.|+||.|.+++.+. |..+|+|++.+.   .....+...+|..+|+.+.||+++++++.+.+.+.++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            578899999999999999999854 778999999763   3344567789999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||++||-|..+|++..   .+++..+..+|.||+.||+|||+.+   |++|||||+|||||.+|++||+|||.|+.+.  
T Consensus       124 eyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--  195 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVS--  195 (355)
T ss_pred             eccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEec--
Confidence            9999999999996543   4888899999999999999999988   9999999999999999999999999999863  


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                         ..+-..+|||.|+|||++....+..++|.|||||++|||+.|.+||....+....+.|..     ..-..+..+.+ 
T Consensus       196 ---~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~-----~~v~fP~~fs~-  266 (355)
T KOG0616|consen  196 ---GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILE-----GKVKFPSYFSS-  266 (355)
T ss_pred             ---CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHh-----CcccCCcccCH-
Confidence               235568999999999999999999999999999999999999999865444211111111     01111222221 


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCC
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDR  650 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~R  650 (706)
                                 .+.+|+...|+.|-.+|
T Consensus       267 -----------~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  267 -----------DAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             -----------HHHHHHHHHHhhhhHhh
Confidence                       34467778888888888

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-40  Score=342.09  Aligned_cols=251  Identities=27%  Similarity=0.443  Sum_probs=206.3

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ...|...++||+|+.|.||.++. ..++.||||++........+-+.+|+.+|+..+|+|||+++..+..++++++||||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy  351 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY  351 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence            35677789999999999999986 56889999998765555567789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      |++|+|.+.+..    ..+++.++..|..+++.||+|||.++   |+|||||.+|||++.+|.+||+|||++..+.....
T Consensus       352 m~ggsLTDvVt~----~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~  424 (550)
T KOG0578|consen  352 MEGGSLTDVVTK----TRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS  424 (550)
T ss_pred             cCCCchhhhhhc----ccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence            999999999843    33889999999999999999999998   99999999999999999999999999988755444


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        .....+||+.|||||++....|.+|.||||||++++||+-|++||-.   +.....+   +.....+.+ ++-.+   
T Consensus       425 --KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln---E~PlrAl---yLIa~ng~P-~lk~~---  492 (550)
T KOG0578|consen  425 --KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN---ENPLRAL---YLIATNGTP-KLKNP---  492 (550)
T ss_pred             --ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC---CChHHHH---HHHhhcCCC-CcCCc---
Confidence              33447899999999999999999999999999999999999999643   2222211   112222222 11110   


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          ..--..+.+++.+||+.|+++||+++|+++.
T Consensus       493 ----~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  493 ----EKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             ----cccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence                0111234578889999999999999999863

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.4e-41  Score=338.74  Aligned_cols=262  Identities=24%  Similarity=0.330  Sum_probs=207.1

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHH--HHHHHHHHhhcC-CcceeeeEeEEEeCC-eeE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKE--LKNEIILFSKLQ-HRNLVKLLGCCIHGE-EKL  459 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~  459 (706)
                      ..++|.+.++||.|.||.||+|+.+ .+..||||++++.-.. +++  =.+|+..|++|+ |||||+|..++.+.+ .++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            3468999999999999999999874 4888999998664332 333  357999999998 999999999999988 999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +|||||+ .+|.+++.+.  ...+++..+..|+.||++||+|+|.+|   +.|||+||+|||+.....+||+|||+||.+
T Consensus        87 fVfE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen   87 FVFEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREV  160 (538)
T ss_pred             eeHHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccc
Confidence            9999995 5899999765  567999999999999999999999998   999999999999999999999999999987


Q ss_pred             CCCCCcccccccccccCccCccccc-cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYAS-DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      .+.   ...+..+.|.-|.|||++. ..-|+.+.|+||+|||++|+.+-++.|....+   .+.+.....++..+.....
T Consensus       161 ~Sk---pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE---~Dqi~KIc~VLGtP~~~~~  234 (538)
T KOG0661|consen  161 RSK---PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE---IDQIYKICEVLGTPDKDSW  234 (538)
T ss_pred             ccC---CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH---HHHHHHHHHHhCCCccccc
Confidence            543   3445578999999999875 56899999999999999999999988754333   3333333333322111111


Q ss_pred             -----------------ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          619 -----------------IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       619 -----------------~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                                       ....+...... ...++++++..|++.||.+|||++|.+++-
T Consensus       235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~p  292 (538)
T KOG0661|consen  235 PEGYNLASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQHP  292 (538)
T ss_pred             hhHHHHHHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence                             11111111111 334678899999999999999999998764

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-40  Score=341.56  Aligned_cols=242  Identities=29%  Similarity=0.442  Sum_probs=196.8

Q ss_pred             CCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      +..++-||.|+.|-||+|+++ ++.||||+++...       ..++.-|++|+||||+.|.|+|.....++||||||..|
T Consensus       126 IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G  197 (904)
T KOG4721|consen  126 ISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG  197 (904)
T ss_pred             hhhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence            344578999999999999995 5689999885432       34677899999999999999999999999999999999


Q ss_pred             ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccc
Q 005236          469 SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT  548 (706)
Q Consensus       469 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  548 (706)
                      -|...|+..   ..+.......|..+||.||.|||.+.   |||||||.-||||..+..+||+|||.++.+...   ...
T Consensus       198 qL~~VLka~---~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STk  268 (904)
T KOG4721|consen  198 QLYEVLKAG---RPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STK  268 (904)
T ss_pred             cHHHHHhcc---CccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh---hhh
Confidence            999999654   35788888999999999999999987   999999999999999999999999999986433   233


Q ss_pred             cccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCC
Q 005236          549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFN  628 (706)
Q Consensus       549 ~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  628 (706)
                      ..+.||..|||||+|.+.+.+.|+|||||||||||||||..|+...+....      .|.+   +.      ..+.-...
T Consensus       269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI------IwGV---Gs------NsL~LpvP  333 (904)
T KOG4721|consen  269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI------IWGV---GS------NSLHLPVP  333 (904)
T ss_pred             hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee------EEec---cC------CcccccCc
Confidence            447899999999999999999999999999999999999999754332111      1111   00      01111112


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          629 LAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       629 ~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      -.....+.-|+.+||+..|..||++.+++..|.=
T Consensus       334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence            2233355668889999999999999999999974

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-40  Score=337.94  Aligned_cols=264  Identities=27%  Similarity=0.425  Sum_probs=217.1

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhh-HHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      +...+.++||+|-||.|.+.....+..||||+++...... .++|.+|+.+|.+++|||||+|+|+|..++.+++|+|||
T Consensus       538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm  617 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM  617 (807)
T ss_pred             hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence            4567889999999999999999888999999998754444 589999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++|+|.+|+..++... +.-....+|+.||+.||+||.+.+   +|||||.++|+|++.++++||+|||+++.+...++.
T Consensus       618 EnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy  693 (807)
T KOG1094|consen  618 ENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY  693 (807)
T ss_pred             hcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCce
Confidence            9999999997764322 455667789999999999999887   999999999999999999999999999988777766


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS--GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      ......+-+++|||||.+..+++|.++|||+||+++||+++  ...|++....+   ..++..-.....+.....+.   
T Consensus       694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e---~vven~~~~~~~~~~~~~l~---  767 (807)
T KOG1094|consen  694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE---QVVENAGEFFRDQGRQVVLS---  767 (807)
T ss_pred             eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH---HHHHhhhhhcCCCCcceecc---
Confidence            66666788999999999999999999999999999999866  67776554432   22333333333332222111   


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                         .+......+.++++.||..+.++||++++|...|+..
T Consensus       768 ---~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  768 ---RPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             ---CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence               1112233566899999999999999999999999764

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=8.9e-39  Score=344.19  Aligned_cols=260  Identities=30%  Similarity=0.417  Sum_probs=203.1

Q ss_pred             ccCCCccceeccCCceeEEEEEe------CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  457 (706)
                      .++|++.++||+|+||.||+|+.      ..+..||||+++.. .....+.+.+|+.++..+ +||||+++++++..++.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            35789999999999999999974      23568999998643 233456788999999999 89999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccc----------------------------------------------------------
Q 005236          458 KLLIYEFMPNKSLDSFIFDQER----------------------------------------------------------  479 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------  479 (706)
                      .++||||+++|+|.+++.....                                                          
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            9999999999999999864321                                                          


Q ss_pred             --------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          480 --------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       480 --------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                                    ...+++..++.++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++........
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  270 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY  270 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence                          124788899999999999999999987   999999999999999999999999999876433222


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                      .......++..|+|||++.+..++.++||||||+++|||++ |..||.......  ...    +.+..+..... .    
T Consensus       271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~----~~~~~~~~~~~-~----  339 (375)
T cd05104         271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFY----KMIKEGYRMLS-P----  339 (375)
T ss_pred             cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHH----HHHHhCccCCC-C----
Confidence            22222345678999999999999999999999999999998 888865432211  111    11112111110 0    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       ...   ..++.+++.+||+.+|++||++.||+++|+..
T Consensus       340 -~~~---~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         340 -ECA---PSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             -CCC---CHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence             001   12466899999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-39  Score=338.50  Aligned_cols=248  Identities=24%  Similarity=0.372  Sum_probs=203.3

Q ss_pred             HhccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc----ch-hhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCC
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI----SE-QGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGE  456 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~  456 (706)
                      ...+.|.+.+.||+|.||.|+.|+. ..+..||+|.+.+.    .. ...+.+.+|+.++++++ ||||++++.++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3457899999999999999999987 45799999976552    12 34567778999999999 999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-CCeEEeeecc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGL  535 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~Dfgl  535 (706)
                      ..++||||+.+|+|.+++.+.   ..+.+....+++.|++.|++|+|+.+   |+||||||+|||++.+ +++||+|||+
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~---g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~  167 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNK---GRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGL  167 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccc
Confidence            999999999999999999763   44777999999999999999999988   9999999999999999 9999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCC-CC-cchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ-FS-VKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      +....  .........+||+.|+|||++.+.. |+ .++||||+||+||-|++|+.||...   +...+...    +..+
T Consensus       168 s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~---~~~~l~~k----i~~~  238 (370)
T KOG0583|consen  168 SAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS---NVPNLYRK----IRKG  238 (370)
T ss_pred             ccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc---cHHHHHHH----HhcC
Confidence            99763  1223344578999999999999987 86 7899999999999999999998751   11122211    1111


Q ss_pred             C--CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          614 M--PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       614 ~--~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                      .  .+..+.           ...+..++.+||+.+|.+|+++.+++
T Consensus       239 ~~~~p~~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  239 EFKIPSYLL-----------SPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             CccCCCCcC-----------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            1  111110           23566789999999999999999999

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.1e-38  Score=343.30  Aligned_cols=260  Identities=32%  Similarity=0.460  Sum_probs=203.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  457 (706)
                      .++|.+.+.||+|+||.||+|+..      ++..||||++... .....+.+.+|+.+++.+ +||||+++++++.....
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~  116 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP  116 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence            357999999999999999998752      2457999998653 334456788999999999 89999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccc----------------------------------------------------------
Q 005236          458 KLLIYEFMPNKSLDSFIFDQER----------------------------------------------------------  479 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------  479 (706)
                      .++||||+++|+|.+++.....                                                          
T Consensus       117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (374)
T cd05106         117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD  196 (374)
T ss_pred             eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence            9999999999999999864311                                                          


Q ss_pred             ---------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccc
Q 005236          480 ---------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR  550 (706)
Q Consensus       480 ---------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  550 (706)
                               ...+++..+++++.||++||.|||+.+   |+||||||+|||+++++.+||+|||+++.+...........
T Consensus       197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~  273 (374)
T cd05106         197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN  273 (374)
T ss_pred             ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence                     123678889999999999999999987   99999999999999999999999999986543322212222


Q ss_pred             cccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCH
Q 005236          551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNL  629 (706)
Q Consensus       551 ~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  629 (706)
                      ..++..|||||++.+..++.++||||||+++|||++ |+.||........   .   .............     ...  
T Consensus       274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~---~---~~~~~~~~~~~~~-----~~~--  340 (374)
T cd05106         274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK---F---YKMVKRGYQMSRP-----DFA--  340 (374)
T ss_pred             CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH---H---HHHHHcccCccCC-----CCC--
Confidence            345678999999999999999999999999999997 9999764332211   1   1111111110000     011  


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          630 AEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       630 ~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                        ...+.+++..||+.+|.+||++.+|+++|+.+
T Consensus       341 --~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         341 --PPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             --CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence              12466788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=3.6e-39  Score=331.93  Aligned_cols=247  Identities=26%  Similarity=0.408  Sum_probs=204.1

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|.+.+.||+|.||.||||+.+. .+.||+|.+.+  ..++..+.+.+|++++++++|||||.+++.|+...+.++|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            578899999999999999999865 67899999865  455667889999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+.| +|..+|.+..+   ++++.+..++.+++.||.|||+..   |+|||+||+|||++..+++|++|||+|+..... 
T Consensus        82 ~a~g-~L~~il~~d~~---lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~-  153 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGK---LPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN-  153 (808)
T ss_pred             hhhh-hHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccC-
Confidence            9988 99999966543   889999999999999999999987   999999999999999999999999999976432 


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                       ......+.|||-|||||...+.+|+..+|.||+|||+||+++|++||-..   ....++   ..+..++....      
T Consensus       154 -t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~---si~~Lv---~~I~~d~v~~p------  220 (808)
T KOG0597|consen  154 -TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR---SITQLV---KSILKDPVKPP------  220 (808)
T ss_pred             -ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH---HHHHHH---HHHhcCCCCCc------
Confidence             22344578999999999999999999999999999999999999997421   111111   11111111110      


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                           ......+..++...|+.||..|.|..+++..
T Consensus       221 -----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  221 -----STASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             -----ccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence                 0122345677788999999999999998753

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-38  Score=329.12  Aligned_cols=244  Identities=20%  Similarity=0.318  Sum_probs=195.5

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhh---HHHHHHHHHHHhhcCCcceeeeEeEEEe----CCeeEEEEecC
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG---LKELKNEIILFSKLQHRNLVKLLGCCIH----GEEKLLIYEFM  465 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~e~~  465 (706)
                      ..||+|++|.||+|.. +++.||||++.......   .+.+.+|+.++.+++||||+++++++.+    ....++||||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            6899999999999998 68899999997643322   5778899999999999999999999977    34678999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      ++|+|.+++...   ..+++...+.++.+++.||.|||+. +   ++||||||+|||+++++.+||+|||+++.+.... 
T Consensus       105 ~~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-  177 (283)
T PHA02988        105 TRGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-  177 (283)
T ss_pred             CCCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence            999999999653   3578899999999999999999984 5   7899999999999999999999999998653221 


Q ss_pred             cccccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                          ....++..|+|||++.+  ..++.++|||||||++|||++|+.||.....   .......   ........+ +  
T Consensus       178 ----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~---~~~~~~i---~~~~~~~~~-~--  244 (283)
T PHA02988        178 ----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT---KEIYDLI---INKNNSLKL-P--  244 (283)
T ss_pred             ----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH---HHHHHHH---HhcCCCCCC-C--
Confidence                12467899999999976  6899999999999999999999999864321   1111111   111111111 1  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                            ......+.+++.+||+.||.+|||++||++.|+..
T Consensus       245 ------~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        245 ------LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             ------CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence                  01122466889999999999999999999999865

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=3.6e-38  Score=327.14  Aligned_cols=251  Identities=26%  Similarity=0.360  Sum_probs=198.4

Q ss_pred             CCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          388 NFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .|++.+.||+|+||.||++.. .+++.||+|.+....   ......+.+|+.++.+++|+||+++++++.+.+..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            367789999999999999987 468899999986432   2234567889999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++|+|.+++.... ...+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||++.......
T Consensus        81 ~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05631          81 IMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE  156 (285)
T ss_pred             ecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence            999999998886432 235788999999999999999999988   9999999999999999999999999998753221


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                         ......||..|+|||++.+..++.++|||||||++|||++|+.||...........+..   ...... ..+     
T Consensus       157 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~---~~~~~~-~~~-----  224 (285)
T cd05631         157 ---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDR---RVKEDQ-EEY-----  224 (285)
T ss_pred             ---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHH---Hhhccc-ccC-----
Confidence               12235689999999999999999999999999999999999999865433221111111   111111 011     


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVIL  658 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~  658 (706)
                      ....+    ..+.+|+..||+.+|.+||+     ++++++
T Consensus       225 ~~~~s----~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         225 SEKFS----EDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             CccCC----HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            01111    24567889999999999997     677775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-39  Score=327.75  Aligned_cols=248  Identities=26%  Similarity=0.434  Sum_probs=206.3

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ..|+..+.||+|.||.||+|.+.. ++.||+|++.. ......+.+++|+.++..++|+||.++|+.+..+..++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            457777999999999999999854 78899999865 3445578899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      |.+|++.+.|...   ..+++..+.-++.++..||.|||.++   .+|||||+.||||..+|.+||+|||.+-.+.....
T Consensus        93 ~~gGsv~~lL~~~---~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   93 CGGGSVLDLLKSG---NILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             hcCcchhhhhccC---CCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhh
Confidence            9999999998432   23467777778899999999999998   99999999999999999999999999987755444


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                      ..  ...+||+.|||||++....|+.|+||||||++.+||.+|.+|+...++..-..++-       ...     .|.+.
T Consensus       167 rr--~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIp-------k~~-----PP~L~  232 (467)
T KOG0201|consen  167 RR--KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIP-------KSA-----PPRLD  232 (467)
T ss_pred             cc--ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEecc-------CCC-----CCccc
Confidence            33  55899999999999998899999999999999999999999988777644333221       111     22222


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +.+.    ..+.+++..||+.+|+.||++.++++
T Consensus       233 ~~~S----~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  233 GDFS----PPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             cccC----HHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            2222    23567888999999999999999975

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-38  Score=322.49  Aligned_cols=258  Identities=26%  Similarity=0.364  Sum_probs=199.2

Q ss_pred             HhccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccch--------------hhHHHHHHHHHHHhhcCCcceeee
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISE--------------QGLKELKNEIILFSKLQHRNLVKL  448 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~l  448 (706)
                      ...++|++.+.||+|.||.|-+|+. .+++.||||++.+...              ...+...+|+.+|++++|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            3457999999999999999999997 4688999999865211              123578899999999999999999


Q ss_pred             EeEEEe--CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC
Q 005236          449 LGCCIH--GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM  526 (706)
Q Consensus       449 ~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~  526 (706)
                      +.+..+  .+.+|||+|||..|.+...=   .....++..++++++.++..||+|||.++   ||||||||+|+||+++|
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g  247 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDG  247 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCC
Confidence            999865  45889999999988875432   22223889999999999999999999999   99999999999999999


Q ss_pred             CeEEeeeccccccCCC---CCcccccccccccCccCccccccCC----CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005236          527 NPKISDFGLARAFGGD---ETEGNTNRVVGTYGYMAPEYASDGQ----FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK  599 (706)
Q Consensus       527 ~~kl~Dfgla~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDv~SlGvil~elltG~~p~~~~~~~~~  599 (706)
                      ++||+|||.+..+...   .........+|||.|||||.+.++.    .+.+.||||+||+||.|+.|+.||-.   +..
T Consensus       248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~---~~~  324 (576)
T KOG0585|consen  248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD---DFE  324 (576)
T ss_pred             cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc---chH
Confidence            9999999999876322   1112233478999999999997743    34688999999999999999999743   112


Q ss_pred             hhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          600 LNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       600 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      .++...   +.++ .        +.-....+.-..+.+|++.+|+.||+.|.+..+|....=-
T Consensus       325 ~~l~~K---Ivn~-p--------L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv  375 (576)
T KOG0585|consen  325 LELFDK---IVND-P--------LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV  375 (576)
T ss_pred             HHHHHH---HhcC-c--------ccCCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence            222211   1111 1        1111111233456689999999999999999999887743

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-39  Score=339.60  Aligned_cols=245  Identities=26%  Similarity=0.389  Sum_probs=201.8

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCe
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEE  457 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~  457 (706)
                      ....++|.+.++||+|+||+|+++..+. ++.+|||.+++.   .....+..+.|..++.... ||.|++|+.+|...++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            3445789999999999999999999865 778999999873   4566788899999888775 9999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      ++.||||+.||++..++    ....+++..+..+|..|+.||+|||+++   ||+||||.+|||||.+|++||+||||++
T Consensus       444 l~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcK  516 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCK  516 (694)
T ss_pred             EEEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccc
Confidence            99999999999965544    2345899999999999999999999998   9999999999999999999999999999


Q ss_pred             ccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      .--.  ....+...+||+.|||||++.+..|+..+|.|||||+|||||.|+.||...+.++..+-|..      +..   
T Consensus       517 e~m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~------d~~---  585 (694)
T KOG0694|consen  517 EGMG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN------DEV---  585 (694)
T ss_pred             ccCC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc------CCC---
Confidence            6421  23356679999999999999999999999999999999999999999865444332221111      110   


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM  653 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~  653 (706)
                              .++.-...+.+.++..+|..+|++|--+
T Consensus       586 --------~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  586 --------RYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             --------CCCCcccHHHHHHHHHHhccCcccccCC
Confidence                    0111122356678889999999999877

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-38  Score=336.42  Aligned_cols=252  Identities=23%  Similarity=0.336  Sum_probs=201.7

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||.||+|+... ++.||||++....   ....+.+..|+.++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            468999999999999999999864 7899999986532   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.... 
T Consensus        81 e~~~g~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-  153 (333)
T cd05600          81 EYVPGGDFRTLLNNL---GVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-  153 (333)
T ss_pred             eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence            999999999999543   34788899999999999999999988   99999999999999999999999999986532 


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC-cccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP-SQLIDA  621 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~  621 (706)
                          ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.    .+..... ....++
T Consensus       154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~  225 (333)
T cd05600         154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLK----YWKETLQRPVYDDP  225 (333)
T ss_pred             ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHH----hccccccCCCCCcc
Confidence                2234578999999999999999999999999999999999999986433221111111    1111000 000000


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .      ......+.+++..||+.+|.+||+++++++.
T Consensus       226 ~------~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         226 R------FNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             c------cccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            0      0112345678889999999999999999976

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=2.4e-38  Score=323.56  Aligned_cols=250  Identities=36%  Similarity=0.575  Sum_probs=193.6

Q ss_pred             ccceeccCCceeEEEEEeC-----CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          391 INKKLGEGGFGPVYKGTLA-----DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       391 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +.+.||.|.||.||+|.+.     .+..|+||.++.. .....+.+.+|+..+++++||||++++|++...+..++||||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4589999999999999987     2568999999653 444578999999999999999999999999988889999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++|+|.++|... ....+++..++.|+.||++||.|||+.+   ++|+||+++||++++++.+||+|||+++.......
T Consensus        83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~  158 (259)
T PF07714_consen   83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK  158 (259)
T ss_dssp             -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred             ccccccccccccc-cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence            9999999999765 2345899999999999999999999987   99999999999999999999999999987633333


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      ............|+|||.+....++.++||||||+++|||++ |+.|+...   ...+.....    .........+   
T Consensus       159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~---~~~~~~~~~----~~~~~~~~~~---  228 (259)
T PF07714_consen  159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY---DNEEIIEKL----KQGQRLPIPD---  228 (259)
T ss_dssp             EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS---CHHHHHHHH----HTTEETTSBT---
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccc----cccccceecc---
Confidence            223333457789999999999999999999999999999999 67775433   222222222    1111111111   


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                        .    ....+..++..||+.+|.+||+++++++.|
T Consensus       229 --~----~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  229 --N----CPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             --T----SBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             --c----hhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence              0    112456789999999999999999999986

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.1e-37  Score=323.26  Aligned_cols=257  Identities=30%  Similarity=0.490  Sum_probs=205.7

Q ss_pred             cCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      ++|++.+.||+|+||.||+|....      ...|++|.+... .....+.+.+|+.++.+++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            478899999999999999998743      257999998643 3344567899999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC
Q 005236          460 LIYEFMPNKSLDSFIFDQER-------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM  526 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~  526 (706)
                      ++|||+++++|.+++.....             ...+++..++.++.|++.||.|||+.+   ++|+||||+||++++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence            99999999999999965321             145788899999999999999999988   99999999999999999


Q ss_pred             CeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHH
Q 005236          527 NPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRH  605 (706)
Q Consensus       527 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~  605 (706)
                      .+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||......   +..  
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~---~~~--  236 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ---EVI--  236 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHH--
Confidence            999999999987543332223334456889999999998999999999999999999998 99887543221   111  


Q ss_pred             HHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       606 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                        ..+..........         .....+.+++.+||+.+|.+||+++||++.|++
T Consensus       237 --~~i~~~~~~~~~~---------~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         237 --EMIRSRQLLPCPE---------DCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             --HHHHcCCcCCCcc---------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence              1122222111111         112356788999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-38  Score=333.33  Aligned_cols=248  Identities=25%  Similarity=0.320  Sum_probs=207.1

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .-|++++.||.|+-|.|-.|++ ..|+.+|||++.+.   .......+.+|+.+|+.+.|||++++++++++..++|+|.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            5688999999999999999998 55999999999764   3344567899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|-|.++|..++   .+.+.+..+++.||+.|+.|+|..+   |+||||||+|+|||..+++||+|||+|..-.. 
T Consensus        92 Eyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~-  164 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP-  164 (786)
T ss_pred             EecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC-
Confidence            9999999999997654   4888899999999999999999998   99999999999999999999999999986322 


Q ss_pred             CCcccccccccccCccCccccccCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFS-VKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                        .......+|++.|.|||++.+.+|. .++||||.|||||.||||+.||+   +++...+..++.+..  -.++..+. 
T Consensus       165 --gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd---DdNir~LLlKV~~G~--f~MPs~Is-  236 (786)
T KOG0588|consen  165 --GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD---DDNIRVLLLKVQRGV--FEMPSNIS-  236 (786)
T ss_pred             --CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC---CccHHHHHHHHHcCc--ccCCCcCC-
Confidence              2233457999999999999999986 78999999999999999999986   333334443333211  11112222 


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                                 .++.+|+..|+..||++|.|++||++.-
T Consensus       237 -----------~eaQdLLr~ml~VDp~~RiT~~eI~kHP  264 (786)
T KOG0588|consen  237 -----------SEAQDLLRRMLDVDPSTRITTEEILKHP  264 (786)
T ss_pred             -----------HHHHHHHHHHhccCccccccHHHHhhCc
Confidence                       1455788899999999999999999863

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1.2e-37  Score=318.97  Aligned_cols=255  Identities=31%  Similarity=0.452  Sum_probs=205.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .++|++.++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.++++++|+||+++++.+...+..++||||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            36789999999999999999998888899999986533 23578899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...+++..++.++.|++.||+|||+.+   ++||||||+||++++++.+||+|||++.........
T Consensus        84 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05072          84 AKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT  159 (261)
T ss_pred             CCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence            9999999996543 345788899999999999999999987   999999999999999999999999999876432211


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                       ......++..|+|||++....++.++||||||+++|||++ |+.||.....   .........    .......     
T Consensus       160 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~~~~~----~~~~~~~-----  226 (261)
T cd05072         160 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN---SDVMSALQR----GYRMPRM-----  226 (261)
T ss_pred             -ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH---HHHHHHHHc----CCCCCCC-----
Confidence             1222345678999999998899999999999999999998 8888753221   112222111    1110000     


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ...    ...+.+++.+|++.+|++||+++++.++|+.
T Consensus       227 ~~~----~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         227 ENC----PDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCC----CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            011    1246678999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-38  Score=335.42  Aligned_cols=245  Identities=22%  Similarity=0.282  Sum_probs=198.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||+|+.. +++.||+|.+...   .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            67999999999999999999985 4789999998653   2234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.....
T Consensus        98 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  171 (329)
T PTZ00263         98 EFVVGGELFTHLRKA---GRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR  171 (329)
T ss_pred             cCCCCChHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence            999999999999653   34788888899999999999999988   999999999999999999999999999875322


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                           .....||+.|+|||++.+..++.++|||||||++|||++|+.||....   ......    ....+... + .  
T Consensus       172 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~---~~~~~~----~i~~~~~~-~-p--  235 (329)
T PTZ00263        172 -----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT---PFRIYE----KILAGRLK-F-P--  235 (329)
T ss_pred             -----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC---HHHHHH----HHhcCCcC-C-C--
Confidence                 123578999999999999999999999999999999999999975322   111111    11111110 0 0  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~~  659 (706)
                        ...+    ..+.+++..||+.||.+||+     +++++..
T Consensus       236 --~~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        236 --NWFD----GRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             --CCCC----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence              0111    24567899999999999997     6777643

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=9.8e-38  Score=337.14  Aligned_cols=261  Identities=30%  Similarity=0.407  Sum_probs=204.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~  457 (706)
                      .++|.+.++||+|+||.||+|+...      +..||||++... .....+.+.+|+.+++++. ||||+++++++.+...
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            4689999999999999999998632      346999999653 3344567899999999996 9999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccc----------------------------------------------------------
Q 005236          458 KLLIYEFMPNKSLDSFIFDQER----------------------------------------------------------  479 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------  479 (706)
                      .++||||+++|+|.++|.....                                                          
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (400)
T cd05105         116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK  195 (400)
T ss_pred             eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence            9999999999999999864311                                                          


Q ss_pred             -----------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC
Q 005236          480 -----------------------------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ  524 (706)
Q Consensus       480 -----------------------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~  524 (706)
                                                         ...+++..++.++.||++||+|||+.+   |+||||||+|||+++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~  272 (400)
T cd05105         196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQ  272 (400)
T ss_pred             hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeC
Confidence                                               124778888999999999999999987   999999999999999


Q ss_pred             CCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHH
Q 005236          525 DMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLI  603 (706)
Q Consensus       525 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~  603 (706)
                      ++.+||+|||+++.+.............++..|+|||.+.+..++.++||||||+++|||++ |..|+.....+..  ..
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~--~~  350 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST--FY  350 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--HH
Confidence            99999999999987643322222233456788999999999999999999999999999997 8888754322111  11


Q ss_pred             HHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          604 RHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       604 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                          .....+......     .    .....+.+++.+||+.+|++||++.+|+++|+.+.
T Consensus       351 ----~~~~~~~~~~~~-----~----~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         351 ----NKIKSGYRMAKP-----D----HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             ----HHHhcCCCCCCC-----c----cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence                111111111100     0    11235678999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-38  Score=330.60  Aligned_cols=245  Identities=22%  Similarity=0.270  Sum_probs=198.2

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||.||+|... +++.||+|++....   ....+.+.+|+.++++++||||+++++++.+....++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            47889999999999999999985 58899999985422   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.....
T Consensus        81 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~  154 (291)
T cd05612          81 EYVPGGELFSYLRNS---GRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR  154 (291)
T ss_pred             eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence            999999999999643   34788899999999999999999988   999999999999999999999999999865321


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                           .....|++.|+|||++.+..++.++|||||||++|||++|+.||.....   .......    ..... .+    
T Consensus       155 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---~~~~~~i----~~~~~-~~----  217 (291)
T cd05612         155 -----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP---FGIYEKI----LAGKL-EF----  217 (291)
T ss_pred             -----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHH----HhCCc-CC----
Confidence                 2235689999999999999999999999999999999999999754321   1111111    11111 00    


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~~  659 (706)
                       ....    ...+.+++.+||+.||.+||+     ++|+++.
T Consensus       218 -~~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         218 -PRHL----DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             -CccC----CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence             0111    124567889999999999995     7777755

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.3e-37  Score=319.56  Aligned_cols=255  Identities=26%  Similarity=0.393  Sum_probs=201.7

Q ss_pred             cCCCccceeccCCceeEEEEEeC----CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.+.||+|+||.||+|.++    .+..||+|.+... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            57889999999999999999863    3568999998764 334456789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++....  ..+++..++.++.||+.||+|||+.+   ++||||||+|||++.++.+|++|||.+.....
T Consensus        85 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~  159 (266)
T cd05064          85 TEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS  159 (266)
T ss_pred             EEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence            99999999999996532  35889999999999999999999988   99999999999999999999999998765422


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ... .......++..|+|||.+.+..++.++||||||+++||+++ |+.||......   ..+..    .......... 
T Consensus       160 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~---~~~~~----~~~~~~~~~~-  230 (266)
T cd05064         160 EAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ---DVIKA----VEDGFRLPAP-  230 (266)
T ss_pred             cch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHH----HHCCCCCCCC-
Confidence            111 11112345678999999999999999999999999999875 99997543221   11111    1111111110 


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                          ..    ....+.+++..||+.+|.+||++++|.+.|+..
T Consensus       231 ----~~----~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         231 ----RN----CPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             ----CC----CCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence                01    122466788999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=1.5e-37  Score=317.25  Aligned_cols=252  Identities=26%  Similarity=0.423  Sum_probs=201.7

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.+.||+|+||.||++.++++..+|+|.+... ....+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            468888999999999999999988889999987643 2234678899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +|+|.+++....  ..+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++........ 
T Consensus        83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-  156 (256)
T cd05114          83 NGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-  156 (256)
T ss_pred             CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCcee-
Confidence            999999986433  35789999999999999999999988   999999999999999999999999999865322211 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......++..|+|||++.+..++.++||||||+++|||++ |+.||....   ..........    +....  .+    
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~---~~~~~~~i~~----~~~~~--~~----  223 (256)
T cd05114         157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS---NYEVVEMISR----GFRLY--RP----  223 (256)
T ss_pred             ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHHC----CCCCC--CC----
Confidence            1122345678999999998899999999999999999999 888875322   1222222111    11100  00    


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ..   ....+.+++.+||+.+|.+||+++++++.|.
T Consensus       224 ~~---~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         224 KL---ASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             CC---CCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            00   1135678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=1.2e-37  Score=330.22  Aligned_cols=199  Identities=27%  Similarity=0.373  Sum_probs=174.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.+.||+|+||.||+++.. .+..+|+|.+... .....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            368999999999999999999985 4778899988653 33445789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++...   ..+++..+..++.|++.||.|||+.+  .|+||||||+|||+++++.+||+|||++..+... 
T Consensus        84 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-  157 (331)
T cd06649          84 HMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-  157 (331)
T ss_pred             cCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc-
Confidence            99999999999643   34788999999999999999999853  3999999999999999999999999999865322 


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~  593 (706)
                         ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence               22335689999999999999999999999999999999999999854

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.8e-37  Score=344.09  Aligned_cols=253  Identities=17%  Similarity=0.232  Sum_probs=202.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCC--CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD--EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ..|.+.+.||+|+||.||+|....  ++.||+|.+..........+..|+.+++.++|||||++++++...+..++||||
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~  146 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY  146 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence            348899999999999999998643  567888887655555566788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      +++|+|.++|.+. .....+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+++.+....
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~  223 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV  223 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence            9999999988643 22345788899999999999999999987   9999999999999999999999999998764433


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      .........||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......   .. .+....+.    
T Consensus       224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---~~~~~~---~~-~~~~~~~~----  292 (478)
T PTZ00267        224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---REIMQQ---VL-YGKYDPFP----  292 (478)
T ss_pred             ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH---HH-hCCCCCCC----
Confidence            22233446799999999999999999999999999999999999999753221   111111   11 11111110    


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ...    ...+.+++..||+.+|.+||++.+++.
T Consensus       293 -~~~----s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        293 -CPV----SSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             -ccC----CHHHHHHHHHHhccChhhCcCHHHHHh
Confidence             011    124667889999999999999999864

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.2e-37  Score=316.88  Aligned_cols=255  Identities=30%  Similarity=0.451  Sum_probs=204.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .++|++.+.||+|++|.||+|...+++.||+|.+.... ...+++.+|+.++++++||||+++++++...+..++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            35788999999999999999998888899999986533 33567899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...+++..+..++.|++.||.|||+.+   ++|+||||+||++++++.+||+|||+++........
T Consensus        84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05068          84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE  159 (261)
T ss_pred             cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence            9999999996543 345789999999999999999999987   999999999999999999999999999876522111


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                       .......+..|+|||++.+..++.++||||||+++|||++ |+.|+.....   .......    ........      
T Consensus       160 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~----~~~~~~~~------  225 (261)
T cd05068         160 -AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---AEVLQQV----DQGYRMPC------  225 (261)
T ss_pred             -ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHH----HcCCCCCC------
Confidence             1111223468999999999999999999999999999999 8888753221   1111111    11110000      


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                         .......+.+++.+|++.+|.+||++.+|++.|+.
T Consensus       226 ---~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         226 ---PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             ---CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence               00112356789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.7e-37  Score=320.81  Aligned_cols=259  Identities=27%  Similarity=0.439  Sum_probs=202.8

Q ss_pred             hccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  457 (706)
                      ..++|++.+.||+|+||.||+|...      .+..||+|++... ......++.+|+.+++.++||||+++++++.++..
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4568999999999999999999763      2467999998643 23345678899999999999999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccc-------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          458 KLLIYEFMPNKSLDSFIFDQER-------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                      .++||||+++++|.+++.....       ...+++..++.++.|++.||+|||+.+   ++|+||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence            9999999999999999865321       234678889999999999999999987   999999999999999999999


Q ss_pred             eeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHH
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKL  609 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~  609 (706)
                      +|||+++.+.............++..|+|||++.+..++.++||||||+++|||++ |..|+.....   .....    .
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~---~~~~~----~  233 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN---EQVLR----F  233 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH----H
Confidence            99999986543322222222345788999999999999999999999999999999 6777643221   11111    1


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ..........+     .    ....+.+++.+||+.+|++|||+.|+++.|++
T Consensus       234 ~~~~~~~~~~~-----~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         234 VMEGGLLDKPD-----N----CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             HHcCCcCCCCC-----C----CCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            11111111111     1    12246789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=3.2e-37  Score=372.72  Aligned_cols=263  Identities=25%  Similarity=0.460  Sum_probs=211.6

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ....+...+.||+|+||.||+|+. .++..||||++......    ...|+..+++++|||||+++++|.+.+..++|||
T Consensus       688 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E  763 (968)
T PLN00113        688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE  763 (968)
T ss_pred             HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence            345677888999999999999997 56889999998653322    2346888999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++|+|.++++      .++|..+.+++.||++||+|||+....+|+||||||+||+++.++..++. ||.......+ 
T Consensus       764 y~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-  835 (968)
T PLN00113        764 YIEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-  835 (968)
T ss_pred             CCCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC-
Confidence            999999999994      27899999999999999999997655669999999999999999988875 6665443211 


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                           ....+|+.|+|||++.+..++.++|||||||++|||+||+.|+..... .......+.............+|+.+
T Consensus       836 -----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  909 (968)
T PLN00113        836 -----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSI  909 (968)
T ss_pred             -----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccc
Confidence                 123678999999999999999999999999999999999999843222 22334445444444444445556555


Q ss_pred             cC--cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          624 KD--SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       624 ~~--~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      ..  ..+.++..++.+++.+||+.+|++||+|+||++.|+....
T Consensus       910 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        910 RGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             cCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            33  3455677788999999999999999999999999997643

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1.4e-37  Score=321.71  Aligned_cols=257  Identities=28%  Similarity=0.472  Sum_probs=205.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCccchh-hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      ++|.+.+.||+|+||.||+|+..+      ++.||||.+...... ..+.+.+|+.++++++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            568889999999999999998743      478999998764433 5678999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhccc-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          460 LIYEFMPNKSLDSFIFDQE-----------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      +||||+++++|.+++....           ....+++..+..++.|++.||+|||+.+   ++||||||+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence            9999999999999996532           1244788899999999999999999988   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |+.||......   ...... 
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~---~~~~~~-  237 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE---EVIECI-  237 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH-
Confidence            9999999986543322222223456788999999999999999999999999999998 99987533221   122111 


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                         ..+.......     .    ....+.+++..||+.+|.+||++.||++.|+.
T Consensus       238 ---~~~~~~~~~~-----~----~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         238 ---TQGRLLQRPR-----T----CPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             ---HcCCcCCCCC-----C----CCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence               1111111110     1    12346689999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=1.9e-37  Score=322.30  Aligned_cols=260  Identities=28%  Similarity=0.464  Sum_probs=208.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|.+.+.||+|+||.||++...      ++..+|+|.+........+.+.+|+.++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            57889999999999999999852      245689999877666667789999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhccc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          461 IYEFMPNKSLDSFIFDQE----------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                      ||||+++++|.+++....          ....+++..++.++.|++.||+|||+.+   ++||||||+||++++++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence            999999999999996432          2235899999999999999999999988   999999999999999999999


Q ss_pred             eeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHH
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKL  609 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~  609 (706)
                      +|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.||......   .....    
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~---~~~~~----  234 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN---EVIEC----  234 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH----
Confidence            99999986643322222233446788999999999999999999999999999998 88886533221   11111    


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      ...+......     ...+    ..+.+++.+||+.+|.+|||++||++.|+.+..
T Consensus       235 i~~~~~~~~~-----~~~~----~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         235 ITQGRVLQRP-----RTCP----KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             HHcCCcCCCC-----CCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            1111111111     1111    246789999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=6.7e-38  Score=325.62  Aligned_cols=264  Identities=23%  Similarity=0.293  Sum_probs=197.2

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.++||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            57999999999999999999875 57899999986432 22345678999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++ +|.+++....  ..+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++...... 
T Consensus        85 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-  157 (288)
T cd07871          85 LDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-  157 (288)
T ss_pred             CCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC-
Confidence            985 8988885432  34788899999999999999999988   9999999999999999999999999998653221 


Q ss_pred             cccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc-----
Q 005236          545 EGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL-----  618 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  618 (706)
                       .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+....+............+.+     
T Consensus       158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07871         158 -KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE  236 (288)
T ss_pred             -ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence             11223467899999999865 56899999999999999999999998643322221111111100000000000     


Q ss_pred             ----ccccccCcCC----HHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          619 ----IDACFKDSFN----LAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       619 ----~d~~~~~~~~----~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                          ..+.......    ......+.+++.+||+.||.+|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                0000000000    001124568999999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.8e-37  Score=322.95  Aligned_cols=260  Identities=27%  Similarity=0.440  Sum_probs=209.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      .+|.+.+.||+|+||.||+|+..      ++..+++|.+........+.+.+|+.++++++||||+++++++......++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            46888899999999999999752      345689999877666666789999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC
Q 005236          461 IYEFMPNKSLDSFIFDQE-------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN  527 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~  527 (706)
                      ||||+++++|.+++....             ....+++..++.++.||+.||+|||+.+   ++||||||+|||+++++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence            999999999999996532             1234789999999999999999999988   999999999999999999


Q ss_pred             eEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHH
Q 005236          528 PKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHA  606 (706)
Q Consensus       528 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~  606 (706)
                      ++|+|||++................++..|+|||++.+..++.++||||||+++|||++ |+.|+......   ..+   
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~---  235 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT---EVI---  235 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHH---
Confidence            99999999986543322222233456789999999999999999999999999999999 99887543221   111   


Q ss_pred             HHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       607 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                       .....+.......         .....+.+++.+||+.+|.+||++++|+++|+.+..
T Consensus       236 -~~~~~~~~~~~~~---------~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         236 -ECITQGRVLERPR---------VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             -HHHhCCCCCCCCc---------cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence             1122222211111         112346689999999999999999999999998733

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=3.8e-38  Score=327.31  Aligned_cols=265  Identities=21%  Similarity=0.276  Sum_probs=200.2

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.+.||+|+||.||+++.+ +++.||+|++...  .....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46899999999999999999985 4788999998643  23345678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |++++.|..+...   ...+++..+..++.||+.||.|||+.+   ++||||||+||+++.++.+||+|||+++.+....
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  154 (287)
T cd07848          81 YVEKNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS  154 (287)
T ss_pred             cCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence            9999877765432   245888899999999999999999987   9999999999999999999999999998764322


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH--------HH-hhcCC
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW--------KL-WNEGM  614 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~--------~~-~~~~~  614 (706)
                      . .......|++.|+|||++.+..++.++|||||||++|||++|+.||......+....+....        .. .....
T Consensus       155 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07848         155 N-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR  233 (287)
T ss_pred             c-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence            1 12223568999999999999899999999999999999999999986433221111111100        00 00000


Q ss_pred             CcccccccccCcCCH------HHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          615 PSQLIDACFKDSFNL------AEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~------~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ......+........      .....+.+++.+||+.||++|||++|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            000000001000000      01224778999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=3.4e-37  Score=316.48  Aligned_cols=256  Identities=27%  Similarity=0.450  Sum_probs=204.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCC----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.+.||+|+||.||+|.+..    ...||||.+... .......+.+|+.++++++||||+++++.+...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            578999999999999999998743    457999998653 344456789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++....  ..+++..++.++.|++.||+|||+.+   |+|+||||+||++++++.++|+|||+++.+..
T Consensus        84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  158 (266)
T cd05033          84 TEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED  158 (266)
T ss_pred             EEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence            99999999999996533  35889999999999999999999987   99999999999999999999999999998752


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ...........++..|+|||.+.+..++.++||||||+++|||++ |..|+.....   .......    ........  
T Consensus       159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~----~~~~~~~~--  229 (266)
T cd05033         159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN---QDVIKAV----EDGYRLPP--  229 (266)
T ss_pred             cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH---HHHHHHH----HcCCCCCC--
Confidence            222222222345678999999999999999999999999999998 9888743221   1111111    11111000  


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                             .......+.+++.+|++.+|++||++.||++.|+.+
T Consensus       230 -------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         230 -------PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             -------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                   001123467899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.6e-37  Score=317.83  Aligned_cols=255  Identities=32%  Similarity=0.503  Sum_probs=208.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      ..+|++.++||.|+||.||+|+..+++.+++|.+........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM   84 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence            45789999999999999999999889999999998766656778999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...+++..+..++.||+.||.|||+.+   ++|+||+|+||++++++.+||+|||++.........
T Consensus        85 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~  160 (261)
T cd05148          85 EKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL  160 (261)
T ss_pred             ccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence            9999999997543 345789999999999999999999987   999999999999999999999999999876432211


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        .....++..|+|||.+....++.++||||||+++|+|++ |+.|+.....   ........    .......      
T Consensus       161 --~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---~~~~~~~~----~~~~~~~------  225 (261)
T cd05148         161 --SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---HEVYDQIT----AGYRMPC------  225 (261)
T ss_pred             --ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHH----hCCcCCC------
Confidence              112345778999999998899999999999999999998 8888754321   12222211    1110000      


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                         .......+.+++.+||+.+|.+|||++++++.|+.
T Consensus       226 ---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         226 ---PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             ---CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence               01112346689999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.9e-38  Score=327.58  Aligned_cols=251  Identities=25%  Similarity=0.374  Sum_probs=209.7

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe-eEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE-KLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lV~  462 (706)
                      ++|..+++||+|+||.++..+.+ +.+.+|+|++..  ......+...+|+.++++++|||||.+.+.+.+++. .+|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            67899999999999999999874 477899998754  344455678899999999999999999999999988 89999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      +|++||+|.+.|.+++ ...++++.++.|+.||+.|+.|||+..   |+|||||+.|||++.++.+||+|||+|+.+..+
T Consensus        84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~  159 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE  159 (426)
T ss_pred             eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence            9999999999997665 567899999999999999999999776   999999999999999999999999999998655


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      ..  .....+||+.||.||.+.+.+|..|+|||||||++|||++-+++|...   +...++....+..        ..+.
T Consensus       160 ~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~---~m~~Li~ki~~~~--------~~Pl  226 (426)
T KOG0589|consen  160 DS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS---NMSELILKINRGL--------YSPL  226 (426)
T ss_pred             hh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc---chHHHHHHHhhcc--------CCCC
Confidence            42  344578999999999999999999999999999999999999997543   3334444433322        1111


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..     .....+..++..|++.+|+.||++.+++.+
T Consensus       227 p~-----~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  227 PS-----MYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             Cc-----cccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            11     112245568889999999999999999865

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=4.7e-37  Score=318.48  Aligned_cols=257  Identities=28%  Similarity=0.439  Sum_probs=203.0

Q ss_pred             cCCCccceeccCCceeEEEEEe-----CCCcEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.++||+|+||.||+|..     ..++.+++|.+.. ........+.+|+.++++++||||+++++++..+...++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            5688889999999999999985     2457899999875 334445788999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhccc--------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC
Q 005236          461 IYEFMPNKSLDSFIFDQE--------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM  526 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~--------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~  526 (706)
                      ||||+++++|.+++....              ....+++..++.++.|++.||.|||+.+   ++||||||+|||+++++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence            999999999999985322              1235788899999999999999999987   99999999999999999


Q ss_pred             CeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHH
Q 005236          527 NPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRH  605 (706)
Q Consensus       527 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~  605 (706)
                      .+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.....   ......
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~---~~~~~~  238 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN---QEVIEM  238 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH
Confidence            999999999987643332222333445778999999988899999999999999999999 8888643221   111111


Q ss_pred             HHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       606 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      .    ........     ....    ...+.+++.+||+.+|.+||++.+|.+.|..
T Consensus       239 ~----~~~~~~~~-----~~~~----~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         239 V----RKRQLLPC-----SEDC----PPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             H----HcCCcCCC-----CCCC----CHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            1    11111110     0111    1246678899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=7.4e-38  Score=332.21  Aligned_cols=261  Identities=30%  Similarity=0.441  Sum_probs=203.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeC-C
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKIS-EQGLKELKNEIILFSKL-QHRNLVKLLGCCIHG-E  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~  456 (706)
                      .++|++.+.||+|+||.||+|...      .++.||+|++.... ....+.+..|+.++.++ +||||++++++|... .
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            357999999999999999999742      24689999986532 33456788899999999 899999999988654 5


Q ss_pred             eeEEEEecCCCCChhhhhhcccc---------------------------------------------------------
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQER---------------------------------------------------------  479 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------  479 (706)
                      ..+++|||+++++|.+++.....                                                         
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence            67899999999999999854321                                                         


Q ss_pred             -cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCcc
Q 005236          480 -CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM  558 (706)
Q Consensus       480 -~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~  558 (706)
                       ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.............++..|+
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~  242 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM  242 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence             125789999999999999999999987   9999999999999999999999999998764333222233345677899


Q ss_pred             CccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHH
Q 005236          559 APEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIH  637 (706)
Q Consensus       559 aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  637 (706)
                      |||++.+..++.++|||||||++|||++ |+.||......+.   .   ............ .        ......+.+
T Consensus       243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~---~---~~~~~~~~~~~~-~--------~~~~~~~~~  307 (337)
T cd05054         243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE---F---CRRLKEGTRMRA-P--------EYATPEIYS  307 (337)
T ss_pred             CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH---H---HHHHhccCCCCC-C--------ccCCHHHHH
Confidence            9999999999999999999999999998 9988754322111   1   111111111111 0        011235678


Q ss_pred             HHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          638 IGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       638 l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      ++.+||+.+|++||++.||+++|+.+.
T Consensus       308 l~~~cl~~~p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         308 IMLDCWHNNPEDRPTFSELVEILGDLL  334 (337)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=2.9e-37  Score=325.25  Aligned_cols=256  Identities=27%  Similarity=0.425  Sum_probs=201.1

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-Cc----EEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQ----EIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      .+|++.+.||+|+||.||+|++.. +.    .||+|.+... .....+++.+|+.+++.++||||+++++++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            568999999999999999998643 33    4899998653 345567889999999999999999999998764 5789


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |+||+++|+|.+++....  ..+++..+++++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.
T Consensus        86 v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108          86 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             eeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence            999999999999996543  35788899999999999999999988   9999999999999999999999999998765


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ............++..|+|||++.+..++.++||||||+++|||++ |+.|+.....    ..+.   ............
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~----~~~~---~~~~~~~~~~~~  233 (316)
T cd05108         161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA----SEIS---SILEKGERLPQP  233 (316)
T ss_pred             CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH----HHHH---HHHhCCCCCCCC
Confidence            4332222222345678999999999999999999999999999998 9998753221    1111   111111110000


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                           ...    ...+.+++..||+.+|.+||++.+++..|....
T Consensus       234 -----~~~----~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         234 -----PIC----TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             -----CCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                 011    124567899999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.1e-37  Score=321.80  Aligned_cols=264  Identities=24%  Similarity=0.389  Sum_probs=201.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCC---------------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD---------------EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLG  450 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~  450 (706)
                      ++|++.++||+|+||.||+++..+               ...||+|.++.. .....+.+.+|++++++++||||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            579999999999999999987643               224899998653 3444567899999999999999999999


Q ss_pred             EEEeCCeeEEEEecCCCCChhhhhhcccc---------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEE
Q 005236          451 CCIHGEEKLLIYEFMPNKSLDSFIFDQER---------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVL  521 (706)
Q Consensus       451 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nil  521 (706)
                      ++...+..++||||+++++|.+++.....         ...+++..+++++.|++.||+|||+.+   ++|+||||+||+
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence            99999999999999999999999864321         124688899999999999999999988   999999999999


Q ss_pred             EcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCCCCc
Q 005236          522 LDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS--GKKNRGFYHSDNK  599 (706)
Q Consensus       522 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt--G~~p~~~~~~~~~  599 (706)
                      +++++.+||+|||++..+.............++..|+|||++.+..++.++||||||+++|||++  |..||.....   
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~---  238 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD---  238 (295)
T ss_pred             EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh---
Confidence            99999999999999986543322222223445778999999999999999999999999999998  4455543222   


Q ss_pred             hhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          600 LNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       600 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ...+......+..........  ....    ....+.+++.+|++.+|.+||+|.+|++.|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         239 EQVIENTGEFFRNQGRQIYLS--QTPL----CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             HHHHHHHHHhhhhccccccCC--CCCC----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence            122222222111111100000  0000    11357789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=2.6e-37  Score=330.76  Aligned_cols=248  Identities=25%  Similarity=0.359  Sum_probs=192.7

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|+..++||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            45677899999999999999975 5889999998653 334456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|....       ...+..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.... 
T Consensus       154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-  222 (353)
T PLN00034        154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-  222 (353)
T ss_pred             CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc-
Confidence            9999986532       2456777889999999999999988   9999999999999999999999999998764221 


Q ss_pred             cccccccccccCccCcccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASD-----GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                       .......||..|+|||++..     ...+.++|||||||++|||++|+.||......+.......   .. ........
T Consensus       223 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~---~~-~~~~~~~~  297 (353)
T PLN00034        223 -DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA---IC-MSQPPEAP  297 (353)
T ss_pred             -ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH---Hh-ccCCCCCC
Confidence             12233578999999998743     2345689999999999999999999863222211111111   10 01111110


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                           .    .....+.+++.+||+.+|++||+++||++.
T Consensus       298 -----~----~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        298 -----A----TASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             -----C----ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                 0    112246678999999999999999999875

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=6.2e-38  Score=331.27  Aligned_cols=241  Identities=21%  Similarity=0.259  Sum_probs=192.8

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      +.||+|+||.||+++.. +++.||||++...   .......+.+|+.++++++||||+++++++...+..++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            47999999999999874 5889999998653   2334567788999999999999999999999999999999999999


Q ss_pred             ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccc
Q 005236          469 SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT  548 (706)
Q Consensus       469 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  548 (706)
                      +|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....  ....
T Consensus        81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~  152 (323)
T cd05571          81 ELFFHLSRE---RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GATM  152 (323)
T ss_pred             cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCcc
Confidence            999988643   35788999999999999999999988   999999999999999999999999998753211  1122


Q ss_pred             cccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCC
Q 005236          549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFN  628 (706)
Q Consensus       549 ~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  628 (706)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......   .. .... .+     .... 
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~---~~~~~~---~~-~~~~-~~-----p~~~-  218 (323)
T cd05571         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFEL---IL-MEEI-RF-----PRTL-  218 (323)
T ss_pred             cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH---HHHHHH---HH-cCCC-CC-----CCCC-
Confidence            335799999999999999999999999999999999999999753221   111111   11 1111 00     0111 


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHH
Q 005236          629 LAEVIRCIHIGLLCVQQYPEDRP-----CMPSVIL  658 (706)
Q Consensus       629 ~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~  658 (706)
                         ...+.+++.+||+.||++||     ++.++++
T Consensus       219 ---~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         219 ---SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             ---CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence               12456788999999999999     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-37  Score=341.29  Aligned_cols=257  Identities=26%  Similarity=0.302  Sum_probs=208.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCC-cEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEE-Ee------CC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCC-IH------GE  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~-~~------~~  456 (706)
                      ..++++.+.|.+|||+.||.|++..+ .++|+|++-..++...+.+.+|+.+|++|+ |+|||.+++.. ..      .-
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            35678889999999999999999776 999999988789999999999999999997 99999999932 21      12


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      +.+|.||||.||.|-++|....... +++.++++|+.++++|+.+||... ++|||||||.+||||..+++.||||||.|
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSa  193 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSA  193 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccccc
Confidence            5689999999999999997655434 999999999999999999999884 78999999999999999999999999998


Q ss_pred             cccCCCCCcc-------cccccccccCccCcccc---ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHH
Q 005236          537 RAFGGDETEG-------NTNRVVGTYGYMAPEYA---SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA  606 (706)
Q Consensus       537 ~~~~~~~~~~-------~~~~~~gt~~y~aPE~~---~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~  606 (706)
                      ..........       ......-|+.|.|||.+   .+..+++|+|||+|||+||-|+....||+....-         
T Consensus       194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l---------  264 (738)
T KOG1989|consen  194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL---------  264 (738)
T ss_pred             ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---------
Confidence            7532221110       00112468999999987   5779999999999999999999999998643211         


Q ss_pred             HHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       607 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                                .+++....-........++.+||..||+.||.+||++-+|+..+-.+
T Consensus       265 ----------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l  311 (738)
T KOG1989|consen  265 ----------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL  311 (738)
T ss_pred             ----------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence                      22222222122234455778899999999999999999999888766

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=5.2e-38  Score=333.47  Aligned_cols=246  Identities=24%  Similarity=0.319  Sum_probs=199.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC--CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD--EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      .++|.+.+.||+|+||.||+|+...  +..||+|++...   .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            3679999999999999999998644  368999988542   23345678899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++|+|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       109 v~Ey~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~  182 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRN---KRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVD  182 (340)
T ss_pred             EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence            99999999999999654   34788999999999999999999988   9999999999999999999999999998753


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ..     .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ........    .... . +.
T Consensus       183 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~---~~~~~~i~----~~~~-~-~p  248 (340)
T PTZ00426        183 TR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP---LLIYQKIL----EGII-Y-FP  248 (340)
T ss_pred             CC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH---HHHHHHHh----cCCC-C-CC
Confidence            21     2235789999999999998999999999999999999999999854221   11111111    1111 0 01


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVILM  659 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~~  659 (706)
                          ...+    ..+.+++.+||+.+|++|+     +++++++.
T Consensus       249 ----~~~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        249 ----KFLD----NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             ----CCCC----HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence                1111    2355788999999999995     89988765

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-38  Score=296.01  Aligned_cols=249  Identities=27%  Similarity=0.350  Sum_probs=205.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|-||.||.|+.+. +-.||+|++.+.   ..+...++.+|+++-+.|+||||++++++|.+....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            4789999999999999999999854 667899998763   233456889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      +||..+|.|...|.... ...+++.....++.|+|.||.|+|..+   +|||||||+|+|++.++.+||+|||-+..-. 
T Consensus       101 lEya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-  175 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP-  175 (281)
T ss_pred             EEecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence            99999999999997443 345778888899999999999999887   9999999999999999999999999887532 


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                         .......+||..|.+||...+...+...|+|++|++.||++.|.+||+....++....+....          +..+
T Consensus       176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~----------~~~p  242 (281)
T KOG0580|consen  176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD----------LKFP  242 (281)
T ss_pred             ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc----------ccCC
Confidence               233445789999999999999999999999999999999999999997655333322222211          1111


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                         ..    -...+.+++..|+..+|.+|.+..||+..
T Consensus       243 ---~~----is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  243 ---ST----ISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             ---cc----cChhHHHHHHHHhccCccccccHHHHhhh
Confidence               01    11246689999999999999999999864

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.7e-38  Score=328.53  Aligned_cols=242  Identities=23%  Similarity=0.282  Sum_probs=192.0

Q ss_pred             eccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          395 LGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       395 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      ||+|+||.||+++.. +++.||+|++...   .......+.+|+.++.+++||||+++++++.+.+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999985 4788999998642   334456788999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccc
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR  550 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  550 (706)
                      .+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++......  .....
T Consensus        81 ~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~  152 (312)
T cd05585          81 FHHLQRE---GRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNT  152 (312)
T ss_pred             HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccccc
Confidence            9999653   34788999999999999999999988   9999999999999999999999999998642221  12234


Q ss_pred             cccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHH
Q 005236          551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLA  630 (706)
Q Consensus       551 ~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  630 (706)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ....   ...... .. .+.     ...+  
T Consensus       153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~---~~~~---~~~~~~-~~-~~~-----~~~~--  217 (312)
T cd05585         153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV---NEMY---RKILQE-PL-RFP-----DGFD--  217 (312)
T ss_pred             ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH---HHHH---HHHHcC-CC-CCC-----CcCC--
Confidence            5789999999999999999999999999999999999999753221   1111   111111 11 010     1111  


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          631 EVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       631 ~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                        ..+.+++..||+.||.+||++..+.+.|.
T Consensus       218 --~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         218 --RDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             --HHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence              24567889999999999987655555444

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=3.3e-37  Score=327.25  Aligned_cols=252  Identities=23%  Similarity=0.309  Sum_probs=196.3

Q ss_pred             CCCccceeccCCceeEEEEEeC----CCcEEEEEEcCcc----chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCee
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKI----SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  458 (706)
                      +|++.++||+|+||.||+++..    .++.||+|++.+.    .....+.+..|+.++..+ +||||+++++++...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4788999999999999999763    5788999998642    223345678899999999 599999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        81 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQR---DNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence            9999999999999998653   34788999999999999999999988   99999999999999999999999999986


Q ss_pred             cCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      +...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+...  .. ....  
T Consensus       155 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~--~~-~~~~--  228 (332)
T cd05614         155 FLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRR--IL-KCDP--  228 (332)
T ss_pred             ccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHH--Hh-cCCC--
Confidence            5332221 22235799999999999865 4789999999999999999999998654333222222111  11 1110  


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVILM  659 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~~  659 (706)
                          .+....+    ..+.+++.+||+.||.+||     +++++++.
T Consensus       229 ----~~~~~~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         229 ----PFPSFIG----PEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             ----CCCCCCC----HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence                0011111    2355788899999999999     66677653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=5.8e-37  Score=321.03  Aligned_cols=263  Identities=24%  Similarity=0.317  Sum_probs=196.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch-hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|.+.++||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++.+....++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999985 588999999865332 223467889999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |++ ++|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++......
T Consensus        84 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  157 (303)
T cd07869          84 YVH-TDLCQYMDKH--PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS  157 (303)
T ss_pred             CCC-cCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence            996 5777777543  245788889999999999999999988   9999999999999999999999999997543211


Q ss_pred             CcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC---Cc---
Q 005236          544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM---PS---  616 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~---  616 (706)
                        .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.....  ....+...........   ..   
T Consensus       158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  233 (303)
T cd07869         158 --HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD--IQDQLERIFLVLGTPNEDTWPGVH  233 (303)
T ss_pred             --ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHHhCCCChhhccchh
Confidence              12223567899999999865 4588999999999999999999999864322  1122222111111000   00   


Q ss_pred             ---cccccccc--CcCCHH-------HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          617 ---QLIDACFK--DSFNLA-------EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       617 ---~~~d~~~~--~~~~~~-------~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                         ........  ......       ....+.+++..||+.||.+|||++|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         234 SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence               00000000  000111       0124568899999999999999999985

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-38  Score=296.39  Aligned_cols=265  Identities=23%  Similarity=0.268  Sum_probs=208.1

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-----ee
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-----EK  458 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~  458 (706)
                      ..++|++.++||+|||+-||.++. .++..+|+|++.....++.+..++|++..++++|||+++++++...+.     ..
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~   98 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA   98 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence            347899999999999999999985 568899999998777788899999999999999999999998876544     48


Q ss_pred             EEEEecCCCCChhhhhhcccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQER-CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      |++++|...|+|.+.+..... ...+++.++++|+.+|++||++||+.. ++++||||||.|||+.+++.++|.|||.+.
T Consensus        99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence            999999999999999976543 347999999999999999999999985 479999999999999999999999999987


Q ss_pred             ccCCC-----CCc--ccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCC-CCchhHHHHH
Q 005236          538 AFGGD-----ETE--GNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS-DNKLNLIRHA  606 (706)
Q Consensus       538 ~~~~~-----~~~--~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~-~~~~~~~~~~  606 (706)
                      ...-.     +..  ........|..|.|||.+.   +..++.++|||||||+||+|+.|..||+.... .....+... 
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~-  256 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQ-  256 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeee-
Confidence            53211     000  0111235688999999985   45688999999999999999999999864322 111111111 


Q ss_pred             HHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       607 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                                   .+.+.-..+..-...+.+++.+||+.||.+||++.+++..+..++
T Consensus       257 -------------n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  257 -------------NAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             -------------ccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence                         000000000012235678899999999999999999999887653

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=2.3e-37  Score=320.08  Aligned_cols=257  Identities=25%  Similarity=0.365  Sum_probs=200.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-Cc----EEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQ----EIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.+.||+|+||.||+|++.. ++    .+++|++.... .....++..|+..+++++||||+++++++. +...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            578888999999999999998743 43    47888875432 334567888999999999999999999875 456789


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ++||+++|+|.+++....  ..+++..+..++.||+.||+|||+.+   ++||||||+|||+++++.+||+|||+++.+.
T Consensus        86 i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111          86 VTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLY  160 (279)
T ss_pred             EEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceecc
Confidence            999999999999996533  45889999999999999999999987   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ............++..|+|||++.+..++.++||||||+++|||++ |+.|+.......   .    ...+..+..... 
T Consensus       161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~----~~~~~~~~~~~~-  232 (279)
T cd05111         161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---V----PDLLEKGERLAQ-  232 (279)
T ss_pred             CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---H----HHHHHCCCcCCC-
Confidence            4332223334557789999999998999999999999999999998 998875432211   1    111111111110 


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                       +.   ..    ...+.+++.+|+..+|++|||+.|+++.|.....
T Consensus       233 -~~---~~----~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         233 -PQ---IC----TIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             -CC---CC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence             00   01    1245678889999999999999999999987644

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.5e-37  Score=331.15  Aligned_cols=193  Identities=21%  Similarity=0.293  Sum_probs=167.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ..+|++.++||+|+||.||++... .++.||+|+..      .+.+.+|+.++++++||||+++++++......++|+|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            367999999999999999999984 57889999753      24567899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +. ++|..++...   ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++...... 
T Consensus       165 ~~-~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-  236 (391)
T PHA03212        165 YK-TDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-  236 (391)
T ss_pred             CC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc-
Confidence            95 6888887543   34788999999999999999999987   9999999999999999999999999997542211 


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRG  592 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~  592 (706)
                      ........||+.|+|||++.+..++.++|||||||++|||++|+.|+-
T Consensus       237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~  284 (391)
T PHA03212        237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF  284 (391)
T ss_pred             ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence            112233579999999999999999999999999999999999998753

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-38  Score=309.62  Aligned_cols=263  Identities=26%  Similarity=0.368  Sum_probs=204.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe-----CCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH-----GEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~  457 (706)
                      ...|...+.||+|+||.|.++... +|+.||||++..  ......++..+|+.+++.++|+||+.+.+++..     -+.
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            345666799999999999999984 589999999973  455667888999999999999999999999875     346


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .|+|+|+| +.+|...|+.+   +.++......+++||++||+|+|+.+   ++||||||+|+|++.+..+||+|||+|+
T Consensus       101 vYiV~elM-etDL~~iik~~---~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR  173 (359)
T KOG0660|consen  101 VYLVFELM-ETDLHQIIKSQ---QDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLAR  173 (359)
T ss_pred             eEEehhHH-hhHHHHHHHcC---ccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccccee
Confidence            79999999 66898888543   33888889999999999999999998   9999999999999999999999999999


Q ss_pred             ccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH---------
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW---------  607 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~---------  607 (706)
                      ...........+..+.|.-|.|||++.. ..||...||||+|||+.||++|++-|...+.-+...++....         
T Consensus       174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~  253 (359)
T KOG0660|consen  174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ  253 (359)
T ss_pred             eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence            8755433334456889999999999855 689999999999999999999999886544433333332211         


Q ss_pred             --------HHhhc--CCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          608 --------KLWNE--GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       608 --------~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                              ..+..  ..++.-+...+. ..+    ..+++++.+||..||.+|+|++|+++.-
T Consensus       254 ~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~----p~AidLlekmL~fdP~kRita~eAL~hP  311 (359)
T KOG0660|consen  254 KIRSEKARPYIKSLPQIPKQPFSSIFP-NAN----PLAIDLLEKMLVFDPKKRITAEEALAHP  311 (359)
T ss_pred             HhccHHHHHHHHhCCCCCCCCHHHHcC-CCC----HHHHHHHHHHhccCccccCCHHHHhcCh
Confidence                    11110  000000011111 111    1456888899999999999999998653

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=8e-37  Score=313.16  Aligned_cols=255  Identities=27%  Similarity=0.436  Sum_probs=203.0

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .+|.+.++||+|+||.||+|...+ ++.||+|++... ....+++.+|+.++++++||||+++++++...+..++||||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            457888999999999999999754 788999988653 334567899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...+++..++.++.|+++||+|||+.+   ++||||||+||++++++.+||+|||+++........
T Consensus        85 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~  160 (263)
T cd05052          85 TYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  160 (263)
T ss_pred             CCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence            9999999986533 245789999999999999999999887   999999999999999999999999999876432211


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                       ......++..|+|||.+.+..++.++||||||+++|||++ |..|+.....   ....    ............     
T Consensus       161 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~~----~~~~~~~~~~~~-----  227 (263)
T cd05052         161 -AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVY----ELLEKGYRMERP-----  227 (263)
T ss_pred             -ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHH----HHHHCCCCCCCC-----
Confidence             1112234668999999999999999999999999999998 8888653221   1111    111111111110     


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...    ...+.+++.+||+.+|++||++.+++++|+.+
T Consensus       228 ~~~----~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         228 EGC----PPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCC----CHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            111    13466789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.9e-37  Score=333.66  Aligned_cols=253  Identities=21%  Similarity=0.281  Sum_probs=194.1

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .|++.++||+|+||+||+|+.. .++.||||++...   .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            5888999999999999999874 4789999998653   23445678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+++.+....
T Consensus        82 ~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~  155 (381)
T cd05626          82 YIPGGDMMSLLIRM---EVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH  155 (381)
T ss_pred             cCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence            99999999998653   34788888899999999999999987   9999999999999999999999999986432110


Q ss_pred             Cc---------------------------------------------ccccccccccCccCccccccCCCCcchhhHHHH
Q 005236          544 TE---------------------------------------------GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFG  578 (706)
Q Consensus       544 ~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlG  578 (706)
                      ..                                             .......||+.|+|||++.+..++.++||||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  235 (381)
T cd05626         156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG  235 (381)
T ss_pred             ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence            00                                             001234699999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHH--hcCCCCCCCCChhHH
Q 005236          579 ILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLL--CVQQYPEDRPCMPSV  656 (706)
Q Consensus       579 vil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~--cl~~~p~~RPt~~ev  656 (706)
                      |++|||++|+.||........   ..   ..........+ ...  ...+    ..+.+++.+  |+..++..||+++|+
T Consensus       236 ~il~elltG~~Pf~~~~~~~~---~~---~i~~~~~~~~~-~~~--~~~s----~~~~dli~~ll~~~~~~~~R~~~~~~  302 (381)
T cd05626         236 VILFEMLVGQPPFLAPTPTET---QL---KVINWENTLHI-PPQ--VKLS----PEAVDLITKLCCSAEERLGRNGADDI  302 (381)
T ss_pred             hHHHHHHhCCCCCcCCCHHHH---HH---HHHccccccCC-CCC--CCCC----HHHHHHHHHHccCcccccCCCCHHHH
Confidence            999999999999864332111   11   11110000000 000  0111    134455555  566777779999999


Q ss_pred             HHH
Q 005236          657 ILM  659 (706)
Q Consensus       657 ~~~  659 (706)
                      +..
T Consensus       303 l~h  305 (381)
T cd05626         303 KAH  305 (381)
T ss_pred             hcC
Confidence            875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1.2e-36  Score=322.63  Aligned_cols=199  Identities=26%  Similarity=0.375  Sum_probs=173.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.++||+|+||.||++.+. .+..+|+|.+... .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            368999999999999999999986 4778888887653 33445678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++...   ..+++..+..++.|++.||.|||+.+  .++|+||||+|||+++++.+||+|||++..+... 
T Consensus        84 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-  157 (333)
T cd06650          84 HMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-  157 (333)
T ss_pred             cCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-
Confidence            99999999999643   34788888999999999999999742  3999999999999999999999999999765321 


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~  593 (706)
                         ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence               12235689999999999998999999999999999999999999754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=5e-37  Score=340.69  Aligned_cols=257  Identities=21%  Similarity=0.286  Sum_probs=203.5

Q ss_pred             HhccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC----
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE----  456 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----  456 (706)
                      ...++|.+.++||+|+||.||+++. .+++.||||++..  ........+.+|+..+..++|+||++++..+...+    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3457999999999999999999987 4689999999854  34555677889999999999999999988775432    


Q ss_pred             ----eeEEEEecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEe
Q 005236          457 ----EKLLIYEFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS  531 (706)
Q Consensus       457 ----~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~  531 (706)
                          ..++||||+++|+|.++|.... ....+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEE
Confidence                3679999999999999996532 2346888999999999999999999987   9999999999999999999999


Q ss_pred             eeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh
Q 005236          532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      |||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||....   .......   . .
T Consensus       186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~---~~~~~~~---~-~  258 (496)
T PTZ00283        186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN---MEEVMHK---T-L  258 (496)
T ss_pred             ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---HHHHHHH---H-h
Confidence            9999987644333333344679999999999999999999999999999999999999985322   1111111   1 1


Q ss_pred             cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          612 EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       612 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+....+.     ...    ...+.+++..||+.+|.+||++.+++..
T Consensus       259 ~~~~~~~~-----~~~----~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        259 AGRYDPLP-----PSI----SPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             cCCCCCCC-----CCC----CHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            11111110     111    1246678999999999999999999864

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1.2e-36  Score=313.44  Aligned_cols=256  Identities=25%  Similarity=0.434  Sum_probs=197.6

Q ss_pred             CCccceeccCCceeEEEEEeCCCc---EEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC------Ce
Q 005236          389 FSINKKLGEGGFGPVYKGTLADEQ---EIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG------EE  457 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~  457 (706)
                      |.+.++||+|+||.||+|++.+..   .+|+|.++..  .....+.+.+|+.+++.++||||+++++++...      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            456789999999999999985533   5899987643  345567889999999999999999999987542      24


Q ss_pred             eEEEEecCCCCChhhhhhcc---cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          458 KLLIYEFMPNKSLDSFIFDQ---ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                      .++||||+++|+|.+++...   .....+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg  157 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG  157 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence            68999999999999988432   12345889999999999999999999987   9999999999999999999999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      +++...............+++.|+|||++.+..++.++||||||+++|||++ |+.||....   .......    ...+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---~~~~~~~----~~~~  230 (272)
T cd05075         158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE---NSEIYDY----LRQG  230 (272)
T ss_pred             cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHH----HHcC
Confidence            9987643322112222346778999999999999999999999999999999 788864322   1111111    1111


Q ss_pred             CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          614 MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       614 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .......     .    ....+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus       231 ~~~~~~~-----~----~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         231 NRLKQPP-----D----CLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCCCCCC-----C----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            1111100     1    112456899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=4.9e-37  Score=329.76  Aligned_cols=201  Identities=25%  Similarity=0.357  Sum_probs=174.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||+||+++.. .++.||||++.+..   ......+.+|+.++.+++||||+++++.+.+....++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            47899999999999999999875 47899999986532   233467888999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.|++.||+|||+.+   |+||||||+|||++.++++||+|||+++.+...
T Consensus        81 E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~  154 (363)
T cd05628          81 EFLPGGDMMTLLMKK---DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA  154 (363)
T ss_pred             cCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence            999999999999653   35889999999999999999999988   999999999999999999999999999765321


Q ss_pred             CCc---------------------------------ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCC
Q 005236          543 ETE---------------------------------GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKK  589 (706)
Q Consensus       543 ~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~  589 (706)
                      ...                                 ......+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~  234 (363)
T cd05628         155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP  234 (363)
T ss_pred             ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence            100                                 00123579999999999999999999999999999999999999


Q ss_pred             CCCC
Q 005236          590 NRGF  593 (706)
Q Consensus       590 p~~~  593 (706)
                      ||..
T Consensus       235 Pf~~  238 (363)
T cd05628         235 PFCS  238 (363)
T ss_pred             CCCC
Confidence            9854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-36  Score=313.46  Aligned_cols=256  Identities=25%  Similarity=0.414  Sum_probs=200.5

Q ss_pred             CCccceeccCCceeEEEEEeCC----CcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe-----
Q 005236          389 FSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE-----  457 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  457 (706)
                      |.+.+.||+|+||.||+|....    +..||+|+++..  .....+.+.+|+..++.++||||+++++++...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            5678999999999999998743    367999998643  34446789999999999999999999999876554     


Q ss_pred             -eEEEEecCCCCChhhhhhccc---ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeee
Q 005236          458 -KLLIYEFMPNKSLDSFIFDQE---RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDF  533 (706)
Q Consensus       458 -~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df  533 (706)
                       .++||||+++++|..++....   ....+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence             689999999999999985432   2245889999999999999999999987   999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhc
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNE  612 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~  612 (706)
                      |+++...............++..|+|||++....++.++||||||+++|||++ |..|+.....   ........    .
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---~~~~~~~~----~  230 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---HEIYDYLR----H  230 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHH----c
Confidence            99987644332222222345678999999988899999999999999999999 8888643221   12211111    1


Q ss_pred             CCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       613 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      +.......         .....+.+++.+||+.+|.+||++.||++.|+.+
T Consensus       231 ~~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         231 GNRLKQPE---------DCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCCCCCCc---------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11111111         1123567888999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=6.9e-37  Score=319.35  Aligned_cols=264  Identities=27%  Similarity=0.405  Sum_probs=205.4

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-----------------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-----------------EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKL  448 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l  448 (706)
                      .+|++.++||+|+||.||++...+                 +..||+|.+... .....+.+.+|+.++++++||||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            578999999999999999998643                 245899998653 34456789999999999999999999


Q ss_pred             EeEEEeCCeeEEEEecCCCCChhhhhhccc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcE
Q 005236          449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQE--------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNV  520 (706)
Q Consensus       449 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Ni  520 (706)
                      ++++..++..++||||+++++|.+++....        ....+++..++.++.|++.||+|||+.+   ++|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Ni  161 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhce
Confidence            999999999999999999999999996543        1235889999999999999999999987   99999999999


Q ss_pred             EEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCCCC
Q 005236          521 LLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS--GKKNRGFYHSDN  598 (706)
Q Consensus       521 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt--G~~p~~~~~~~~  598 (706)
                      ++++++.++|+|||+++...............++..|+|||++.+..++.++||||||+++|||++  |..|+....   
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~---  238 (296)
T cd05051         162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT---  238 (296)
T ss_pred             eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC---
Confidence            999999999999999987543332222334456789999999998899999999999999999998  555653322   


Q ss_pred             chhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ...........+...........      .......+.+++.+||+.+|.+|||+.||++.|+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         239 DQQVIENAGHFFRDDGRQIYLPR------PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             hHHHHHHHHhccccccccccCCC------ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            12222222222211111111110      00111357789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=8.4e-37  Score=317.75  Aligned_cols=258  Identities=31%  Similarity=0.445  Sum_probs=202.1

Q ss_pred             CCCccceeccCCceeEEEEEeCC------CcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      +|++.+.||+|+||.||+|+...      ...+++|.+.... ....+.+.+|+.+++.++||||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            47788999999999999998632      3568888886543 3445678999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhccc---------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCc
Q 005236          461 IYEFMPNKSLDSFIFDQE---------------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASN  519 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~N  519 (706)
                      ||||+++++|.+++....                     ....+++..++.++.|++.||+|||+.+   ++||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence            999999999999985421                     1234788999999999999999999887   9999999999


Q ss_pred             EEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCC
Q 005236          520 VLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDN  598 (706)
Q Consensus       520 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~  598 (706)
                      ||+++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.|+.....  
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--  235 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP--  235 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence            9999999999999999986533322222223445778999999988899999999999999999998 8888743221  


Q ss_pred             chhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                       .....    ...........     ..    ....+.+++.+||+.+|.+||++.|+++.|+...
T Consensus       236 -~~~~~----~~~~~~~~~~~-----~~----~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         236 -ERLFN----LLKTGYRMERP-----EN----CSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             -HHHHH----HHhCCCCCCCC-----CC----CCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence             11111    11111111100     11    1135668899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=8.5e-37  Score=311.67  Aligned_cols=252  Identities=27%  Similarity=0.430  Sum_probs=201.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|+.++.+++||||+++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            4688889999999999999998877789999886433 234678999999999999999999999999889999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++....  ..+++..++.++.||+.||+|||+.+   ++|+||||+||++++++.+||+|||+++........ 
T Consensus        83 ~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-  156 (256)
T cd05113          83 NGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT-  156 (256)
T ss_pred             CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCcee-
Confidence            999999986533  25889999999999999999999987   999999999999999999999999999865432211 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......++..|+|||.+.+..++.++||||||+++|||++ |+.|+......   ......    ..........     
T Consensus       157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~----~~~~~~~~~~-----  224 (256)
T cd05113         157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS---ETVEKV----SQGLRLYRPH-----  224 (256)
T ss_pred             ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHH----hcCCCCCCCC-----
Confidence            1112335678999999998889999999999999999999 88887543321   111111    1111110000     


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      .    ....+.+++.+||+.+|.+||++.+|++.|+
T Consensus       225 ~----~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         225 L----ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             C----CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            0    1235678999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=5.4e-37  Score=317.98  Aligned_cols=257  Identities=28%  Similarity=0.440  Sum_probs=201.7

Q ss_pred             cCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      .+|.+.++||+|+||.||+|...+      ++.||+|++.... ....+.+.+|+.++..++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            357788999999999999998643      4789999997543 233567889999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC
Q 005236          460 LIYEFMPNKSLDSFIFDQE-------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM  526 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~  526 (706)
                      +++||+++++|.+++....             ....+++..+.+++.|++.||+|||+.+   ++||||||.||++++++
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~  161 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKL  161 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCC
Confidence            9999999999999985321             1234788889999999999999999987   99999999999999999


Q ss_pred             CeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHH
Q 005236          527 NPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRH  605 (706)
Q Consensus       527 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~  605 (706)
                      .+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..|+.....   ..... 
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~-  237 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QDVIE-  237 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH-
Confidence            999999999887543322222233456789999999998899999999999999999998 7777643221   11111 


Q ss_pred             HHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       606 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                         ...........+     ..    ...+.+++..||+.+|.+||++.+|++.|++
T Consensus       238 ---~i~~~~~~~~~~-----~~----~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         238 ---MIRNRQVLPCPD-----DC----PAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             ---HHHcCCcCCCCC-----CC----CHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence               111211111111     11    2235678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.8e-37  Score=299.32  Aligned_cols=281  Identities=23%  Similarity=0.283  Sum_probs=206.5

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhh--HHHHHHHHHHHhhcCCcceeeeEeEEEe--CCeeE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQG--LKELKNEIILFSKLQHRNLVKLLGCCIH--GEEKL  459 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~  459 (706)
                      ..++|+.++.|++|.||.||+|+++ .++.||+|+++...+..  --.-.+|+.++.+.+|||||.+..+..-  -+..|
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy  153 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY  153 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence            3467899999999999999999985 47789999996533211  1245789999999999999999887753  35789


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +|||||+. +|..+|..-.  +.+...++.-+..|+++|++|||...   |+||||||+|+|+...|.+||+|||+|+.+
T Consensus       154 ~VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~y  227 (419)
T KOG0663|consen  154 IVMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREY  227 (419)
T ss_pred             eeHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhh
Confidence            99999965 7888885543  46788888899999999999999887   999999999999999999999999999988


Q ss_pred             CCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      +...  ...+..+-|.-|.|||.+.+. .|+...|+||+|||+.||+++++.|.....-+....|-.......+..++.+
T Consensus       228 gsp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~  305 (419)
T KOG0663|consen  228 GSPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGY  305 (419)
T ss_pred             cCCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCc
Confidence            6442  223446779999999999875 7999999999999999999999987654443333333332222222222211


Q ss_pred             cc--------------ccccCcCCHH-HHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCCCCCCCCCc
Q 005236          619 ID--------------ACFKDSFNLA-EVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGY  674 (706)
Q Consensus       619 ~d--------------~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~~~p~~p~~  674 (706)
                      ..              ..++..+... ....-.+++...|.+||.+|.|++|.++.= -..+.|.|..|..
T Consensus       306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~-~F~e~P~p~~P~~  375 (419)
T KOG0663|consen  306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE-YFRETPLPIDPSM  375 (419)
T ss_pred             cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc-ccccCCCCCChhh
Confidence            11              0111111111 113446788899999999999999987542 1244444444443

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=4.7e-37  Score=312.73  Aligned_cols=248  Identities=26%  Similarity=0.393  Sum_probs=195.1

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      ++||+|+||.||+|++. +++.+|+|.+... .......+.+|++++++++||||+++++++......++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            47999999999999985 6888999987643 344557799999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccc
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR  550 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  550 (706)
                      .+++...  ...+++..++.++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||++..............
T Consensus        81 ~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  155 (252)
T cd05084          81 LTFLRTE--GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM  155 (252)
T ss_pred             HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence            9998543  235789999999999999999999887   99999999999999999999999999986532211111111


Q ss_pred             cccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCH
Q 005236          551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNL  629 (706)
Q Consensus       551 ~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  629 (706)
                      ...+..|+|||.+.+..++.++||||||+++|||++ |..|+......   ...    ............+         
T Consensus       156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~---~~~----~~~~~~~~~~~~~---------  219 (252)
T cd05084         156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ---QTR----EAIEQGVRLPCPE---------  219 (252)
T ss_pred             CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH---HHH----HHHHcCCCCCCcc---------
Confidence            223567999999999999999999999999999998 88876532221   111    1111111111100         


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          630 AEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       630 ~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      .....+.+++.+||+.+|++|||+.+|.++|+
T Consensus       220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            11235677999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=3.3e-37  Score=320.80  Aligned_cols=261  Identities=22%  Similarity=0.314  Sum_probs=192.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC--CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhc---CCcceeeeEeEEEe-----
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA--DEQEIAVKRLSKIS--EQGLKELKNEIILFSKL---QHRNLVKLLGCCIH-----  454 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----  454 (706)
                      ++|++.+.||+|+||.||+|+..  +++.||+|++....  ......+.+|+.+++.+   +||||+++++++..     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            37899999999999999999873  46789999886422  22234556677776665   69999999999863     


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                      ....++||||++ ++|.+++..... ..+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEcccc
Confidence            346899999997 589988864332 34788999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      +++.....   .......||+.|+|||.+.+..++.++|||||||++|||++|++||......+   .+...........
T Consensus       156 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~---~~~~i~~~~~~~~  229 (290)
T cd07862         156 LARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPG  229 (290)
T ss_pred             ceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCC
Confidence            99875432   22334568999999999999999999999999999999999999986533222   2221111111000


Q ss_pred             Cccc------ccccc--cCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          615 PSQL------IDACF--KDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       615 ~~~~------~d~~~--~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..+.      ....+  ......+     ....+.+++.+||+.+|++|||+.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            0000      00000  0000111     1124568999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.3e-37  Score=329.35  Aligned_cols=265  Identities=22%  Similarity=0.342  Sum_probs=194.1

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-----eeE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-----EKL  459 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~  459 (706)
                      +|++.++||+|+||.||+|+.. +++.||||++...  .......+.+|+.++++++||||+++++++....     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            4788999999999999999975 5889999998642  2234457889999999999999999999886432     479


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +||||++ ++|.+++...   ..+++..+..++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 lv~e~~~-~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          81 VVFELME-SDLHQVIKAN---DDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEEecCC-CCHHHHHHhc---ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            9999995 6898888543   34889999999999999999999988   999999999999999999999999999865


Q ss_pred             CCCCC-cccccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH--------H
Q 005236          540 GGDET-EGNTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW--------K  608 (706)
Q Consensus       540 ~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~--------~  608 (706)
                      ..... ........||+.|+|||++.+  ..++.++|||||||++|||++|+.||...........+....        .
T Consensus       154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  233 (338)
T cd07859         154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS  233 (338)
T ss_pred             ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            32221 112234578999999999876  678999999999999999999999985432211111110000        0


Q ss_pred             HhhcCCCccccccccc-CcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          609 LWNEGMPSQLIDACFK-DSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       609 ~~~~~~~~~~~d~~~~-~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+........+..... ......     ....+.+++..||+.+|++|||++|+++.
T Consensus       234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            0000000000000000 000000     01245689999999999999999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-37  Score=333.16  Aligned_cols=253  Identities=24%  Similarity=0.348  Sum_probs=201.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|.+.+.||+|+||.||+|+.. +++.||||++....   ......+.+|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            47899999999999999999985 58899999986532   234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.+...
T Consensus        81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            999999999999654   45888999999999999999999987   999999999999999999999999999876433


Q ss_pred             C---------------------------CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Q 005236          543 E---------------------------TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYH  595 (706)
Q Consensus       543 ~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~  595 (706)
                      .                           .........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~  234 (350)
T cd05573         155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT  234 (350)
T ss_pred             CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence            2                           0012233568999999999999999999999999999999999999986433


Q ss_pred             CCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-hhHHHHH
Q 005236          596 SDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-MPSVILM  659 (706)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-~~ev~~~  659 (706)
                      ..   ........ +.....  + .. . ..    ....+.+++..|++ +|.+||+ ++++++.
T Consensus       235 ~~---~~~~~i~~-~~~~~~--~-p~-~-~~----~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         235 LQ---ETYNKIIN-WKESLR--F-PP-D-PP----VSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HH---HHHHHHhc-cCCccc--C-CC-C-CC----CCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            11   11111111 001000  0 00 0 00    11245578889997 9999999 9999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=1.2e-36  Score=314.81  Aligned_cols=256  Identities=27%  Similarity=0.443  Sum_probs=203.7

Q ss_pred             cCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      .+|.+.++||+|+||.||++...      ++..+++|.+........+.+.+|+.+++.++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            46788899999999999999742      356789999887777777889999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccc------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          461 IYEFMPNKSLDSFIFDQER------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      ||||+++++|.+++.....            ...+++..++.++.||+.||+|||+.+   ++||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence            9999999999999965421            134788999999999999999999988   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......   ...... 
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~-  237 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT---EAIECI-  237 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH---HHHHHH-
Confidence            9999999986543322222223345788999999999999999999999999999998 88886432211   111111 


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                         ..........     ..    ...+.+++.+||+.+|.+||+++||++.|+
T Consensus       238 ---~~~~~~~~~~-----~~----~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         238 ---TQGRELERPR-----TC----PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             ---HcCccCCCCC-----CC----CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence               1111111111     11    124567899999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.2e-37  Score=326.96  Aligned_cols=241  Identities=22%  Similarity=0.286  Sum_probs=192.0

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      +.||+|+||.||+++.. +++.||+|++...   .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            47999999999999974 5889999998653   2334566788999999999999999999999999999999999999


Q ss_pred             ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccc
Q 005236          469 SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT  548 (706)
Q Consensus       469 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  548 (706)
                      +|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......  ...
T Consensus        81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~  152 (323)
T cd05595          81 ELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATM  152 (323)
T ss_pred             cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Ccc
Confidence            999888543   34788999999999999999999988   9999999999999999999999999987532211  112


Q ss_pred             cccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCC
Q 005236          549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFN  628 (706)
Q Consensus       549 ~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  628 (706)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....   .... .. .     +....+
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~~~~~---~~~~-~~-~-----~p~~~~  219 (323)
T cd05595         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFEL---ILME-EI-R-----FPRTLS  219 (323)
T ss_pred             ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH---HHHHH---HhcC-CC-C-----CCCCCC
Confidence            2356899999999999999999999999999999999999997543221   11111   1111 10 0     001111


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHH
Q 005236          629 LAEVIRCIHIGLLCVQQYPEDRP-----CMPSVIL  658 (706)
Q Consensus       629 ~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~  658 (706)
                          ..+.+++..||+.+|.+||     ++.++++
T Consensus       220 ----~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         220 ----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             ----HHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence                2455788899999999998     7888765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.6e-38  Score=311.58  Aligned_cols=247  Identities=24%  Similarity=0.398  Sum_probs=207.2

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc---cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .+|++.+.||+|.||.|-++.. ..|+.||||.+++   .++++.-.+++|+++|+.|+||||+.++.+|+..+...+||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            5789999999999999999987 6799999999876   46677888999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||..+|.|.+|+.+.   ..+++.+..+++.||..|+.|+|.+.   ++|||||.+|||||.++++||+|||++..+..+
T Consensus       133 EYaS~GeLYDYiSer---~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~~  206 (668)
T KOG0611|consen  133 EYASGGELYDYISER---GSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYADK  206 (668)
T ss_pred             EecCCccHHHHHHHh---ccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhccc
Confidence            999999999999654   45899999999999999999999887   999999999999999999999999999886433


Q ss_pred             CCcccccccccccCccCccccccCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFS-VKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                         ......+|++-|.+||++.+.+|. +..|-|||||+||-|+.|.-||+..+-   ..++..    +..+...+    
T Consensus       207 ---kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh---k~lvrQ----Is~GaYrE----  272 (668)
T KOG0611|consen  207 ---KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH---KRLVRQ----ISRGAYRE----  272 (668)
T ss_pred             ---cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH---HHHHHH----hhcccccC----
Confidence               233458999999999999999985 789999999999999999999865332   122211    11111111    


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                          .   +..-.+.-|+.|||..+|++|.|+.+|+...
T Consensus       273 ----P---~~PSdA~gLIRwmLmVNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  273 ----P---ETPSDASGLIRWMLMVNPERRATIEDIASHW  304 (668)
T ss_pred             ----C---CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence                0   1111234578899999999999999998765

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2.1e-37  Score=327.64  Aligned_cols=242  Identities=21%  Similarity=0.269  Sum_probs=193.4

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      +.||+|+||.||+++.. +++.||+|++...   .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            47999999999999975 5889999998653   2344567888999999999999999999999999999999999999


Q ss_pred             ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccc
Q 005236          469 SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT  548 (706)
Q Consensus       469 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~  548 (706)
                      +|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......  ...
T Consensus        81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~  152 (328)
T cd05593          81 ELFFHLSRE---RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATM  152 (328)
T ss_pred             CHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcc--ccc
Confidence            999888543   34889999999999999999999987   9999999999999999999999999987532211  122


Q ss_pred             cccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCC
Q 005236          549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFN  628 (706)
Q Consensus       549 ~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  628 (706)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......   .... .. .+     ....+
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~---~~~~~~---~~~~-~~-~~-----p~~~~  219 (328)
T cd05593         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFEL---ILME-DI-KF-----PRTLS  219 (328)
T ss_pred             ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH---HHHHHH---hccC-Cc-cC-----CCCCC
Confidence            335789999999999999999999999999999999999999854221   111111   1111 00 00     01111


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHHH
Q 005236          629 LAEVIRCIHIGLLCVQQYPEDRP-----CMPSVILM  659 (706)
Q Consensus       629 ~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~~  659 (706)
                          ..+.+++.+||+.||.+||     ++.|+++.
T Consensus       220 ----~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         220 ----ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             ----HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence                2456788899999999997     88888754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.2e-37  Score=312.64  Aligned_cols=252  Identities=28%  Similarity=0.433  Sum_probs=200.1

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      .+|++.+.||+|+||.||+|.++.+..+|+|.+.... .....+.+|+.++++++||||+++++++...+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            3578889999999999999998877889999885432 234568889999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++....  ..+++..++.++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++........ 
T Consensus        83 ~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-  156 (256)
T cd05059          83 NGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-  156 (256)
T ss_pred             CCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccccc-
Confidence            999999996543  35889999999999999999999988   999999999999999999999999999865322111 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......++..|+|||.+.+..++.++||||||+++|||++ |+.|+......   .......    ........     .
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~----~~~~~~~~-----~  224 (256)
T cd05059         157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS---EVVESVS----AGYRLYRP-----K  224 (256)
T ss_pred             ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH---HHHHHHH----cCCcCCCC-----C
Confidence            1111234568999999999999999999999999999999 78887543221   1111111    11100000     0


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      .    ....+.+++.+||+.+|++|||++||++.|.
T Consensus       225 ~----~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         225 L----APTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             C----CCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence            1    1235678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=5e-37  Score=324.34  Aligned_cols=241  Identities=25%  Similarity=0.328  Sum_probs=191.4

Q ss_pred             ceeccCCceeEEEEEe----CCCcEEEEEEcCcc----chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          393 KKLGEGGFGPVYKGTL----ADEQEIAVKRLSKI----SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++||+|+||.||+++.    ..++.||||.+...    .......+.+|+.+++.++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            6899999999999986    34788999998652    223345678899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++...   ..+.+..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-  154 (323)
T cd05584          82 LSGGELFMHLERE---GIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-  154 (323)
T ss_pred             CCCchHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-
Confidence            9999999998543   34677888889999999999999988   9999999999999999999999999987542221 


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                       .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .....   ... .... .+ .    
T Consensus       155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~---~~~~~---~~~-~~~~-~~-~----  220 (323)
T cd05584         155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR---KKTID---KIL-KGKL-NL-P----  220 (323)
T ss_pred             -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH---HHHHH---HHH-cCCC-CC-C----
Confidence             122335789999999999998999999999999999999999999854321   11111   111 1111 11 0    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVIL  658 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~  658 (706)
                      ...    ...+.+++.+||+.+|++||     +++++++
T Consensus       221 ~~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         221 PYL----TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             CCC----CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            011    12456788999999999999     7888766

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.6e-36  Score=316.61  Aligned_cols=263  Identities=25%  Similarity=0.396  Sum_probs=201.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-----------------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-----------------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKL  448 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l  448 (706)
                      ++|++.++||+|+||.||++...                 +...+|+|++... .....+.+.+|+.++++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            57999999999999999998642                 2346899998753 34456789999999999999999999


Q ss_pred             EeEEEeCCeeEEEEecCCCCChhhhhhcccc--------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcE
Q 005236          449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQER--------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNV  520 (706)
Q Consensus       449 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Ni  520 (706)
                      ++++...+..++||||+++++|.+++.....        ...+++..++.++.|++.||+|||+.+   ++|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence            9999999999999999999999999965321        134778889999999999999999988   99999999999


Q ss_pred             EEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCCCC
Q 005236          521 LLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS--GKKNRGFYHSDN  598 (706)
Q Consensus       521 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt--G~~p~~~~~~~~  598 (706)
                      |+++++.++|+|||+++.+.............++..|+|||......++.++||||||+++|||++  |..|+...... 
T Consensus       162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~-  240 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE-  240 (296)
T ss_pred             EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH-
Confidence            999999999999999986543322222222345678999999988899999999999999999998  66676432221 


Q ss_pred             chhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                        ..+................. .. ..    ....+.+++.+||+.+|.+||++.||++.|+
T Consensus       241 --~~~~~~~~~~~~~~~~~~~~-~~-~~----~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         241 --QVIENTGEFFRDQGRQVYLP-KP-AL----CPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             --HHHHHHHHHHhhccccccCC-CC-CC----CCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence              11211111111111100000 00 01    1135668999999999999999999999986

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.8e-36  Score=313.02  Aligned_cols=258  Identities=30%  Similarity=0.454  Sum_probs=201.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      .++|.+.+.||+|+||.||+|.+.+      +..|++|.+... .......+.+|+.++++++|+||+++++++.+....
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            4678999999999999999998854      567899988643 334456789999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC---CeEEe
Q 005236          459 LLIYEFMPNKSLDSFIFDQER----CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM---NPKIS  531 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~---~~kl~  531 (706)
                      ++||||+++++|.+++.....    ...+++..+++++.||+.||+|||+.+   ++|+||||+||+++.++   .+||+
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence            999999999999999965431    235889999999999999999999987   99999999999998765   59999


Q ss_pred             eeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHh
Q 005236          532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      |||+++.+..............+..|+|||++.+..++.++|||||||++|||++ |+.||......   .....    .
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~---~~~~~----~  234 (277)
T cd05036         162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ---EVMEF----V  234 (277)
T ss_pred             cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH----H
Confidence            9999987633222222222334568999999999999999999999999999997 88887532221   11111    1


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ........     ....    ...+.+++.+|++.+|.+||++.+|++.|+.
T Consensus       235 ~~~~~~~~-----~~~~----~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~  277 (277)
T cd05036         235 TGGGRLDP-----PKGC----PGPVYRIMTDCWQHTPEDRPNFATILERIQY  277 (277)
T ss_pred             HcCCcCCC-----CCCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence            11111010     0011    1346678999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=8.1e-37  Score=321.61  Aligned_cols=240  Identities=26%  Similarity=0.339  Sum_probs=187.4

Q ss_pred             ceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhh-cCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSK-LQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+|+..+ ++.||||.+...   .....+.+..|..++.. .+||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999854 778999998653   22334555667777665 4899999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 g~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~  152 (316)
T cd05592          81 GDLMFHIQSS---GRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GK  152 (316)
T ss_pred             CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cc
Confidence            9999988643   34788889999999999999999987   9999999999999999999999999998643222  22


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......    +..... . +.    ...
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---~~~~~~----i~~~~~-~-~~----~~~  219 (316)
T cd05592         153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---DELFDS----ILNDRP-H-FP----RWI  219 (316)
T ss_pred             cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---HHHHHH----HHcCCC-C-CC----CCC
Confidence            3345789999999999999999999999999999999999999864322   111111    111110 0 00    111


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChh-HHH
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMP-SVI  657 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~-ev~  657 (706)
                          ...+.+++..||+.+|.+||++. +++
T Consensus       220 ----~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         220 ----SKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             ----CHHHHHHHHHHccCCHHHcCCChHHHH
Confidence                12345788899999999999986 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-36  Score=315.73  Aligned_cols=252  Identities=26%  Similarity=0.316  Sum_probs=198.3

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .|++.++||+|+||.||++... +++.||+|++....   ......+.+|+.++++++||||+++++.+..++..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4788899999999999999974 58899999986532   2223457789999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++.... ...+++..+..++.|++.||+|||+.+   ++||||||+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05605          81 LMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE  156 (285)
T ss_pred             ccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence            999999998886432 245889999999999999999999988   9999999999999999999999999998753222


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      .   .....|+..|+|||++.+..++.++||||+|+++|||++|+.||...........+   ........ ...     
T Consensus       157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~---~~~~~~~~-~~~-----  224 (285)
T cd05605         157 T---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEV---ERRVKEDQ-EEY-----  224 (285)
T ss_pred             c---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHH---HHHhhhcc-ccc-----
Confidence            1   12346899999999999999999999999999999999999998643322111111   11111111 000     


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVILM  659 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~~  659 (706)
                          .......+.+++..||+.||.+||     ++.++++.
T Consensus       225 ----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         225 ----SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             ----CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence                001122456789999999999999     77787554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.5e-36  Score=311.86  Aligned_cols=259  Identities=25%  Similarity=0.382  Sum_probs=205.9

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc---cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||.||+|+.. +++.||||.+..   ........+.+|+.+++.++||||+++++++.+.+..++|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            57999999999999999999974 688999998754   23344567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          463 EFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      ||+++++|.+++.... ....++...+..++.||++||.|||+.+   ++|+||||+||+++.++.++|+|||++..+..
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            9999999999886432 2345788899999999999999999987   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ...  ......+++.|+|||.+.+..++.++||||||+++|||++|+.|+..... ........    ..........  
T Consensus       159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~-~~~~~~~~----~~~~~~~~~~--  229 (267)
T cd08228         159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLFSLCQK----IEQCDYPPLP--  229 (267)
T ss_pred             hhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc-cHHHHHHH----HhcCCCCCCC--
Confidence            221  11234678899999999988899999999999999999999999743211 11111111    1111111110  


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                            .......+.+++.+||+.+|.+||++.+|++.|++.
T Consensus       230 ------~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         230 ------TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             ------hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence                  011123567889999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-37  Score=332.10  Aligned_cols=253  Identities=22%  Similarity=0.279  Sum_probs=196.8

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||+++.. .++.||||++...   .......+.+|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            47899999999999999999985 5889999998653   2334566889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+...
T Consensus        81 E~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  154 (364)
T cd05599          81 EYLPGGDMMTLLMKK---DTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS  154 (364)
T ss_pred             CCCCCcHHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence            999999999998653   34889999999999999999999988   999999999999999999999999998765321


Q ss_pred             CCcc------------------------------------cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh
Q 005236          543 ETEG------------------------------------NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS  586 (706)
Q Consensus       543 ~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt  586 (706)
                      ....                                    .....+||+.|+|||++....++.++|||||||++|||++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~  234 (364)
T cd05599         155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV  234 (364)
T ss_pred             ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence            1000                                    0112468999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC---hhHHHHH
Q 005236          587 GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC---MPSVILM  659 (706)
Q Consensus       587 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt---~~ev~~~  659 (706)
                      |+.||.....   .......   ........+... .  ..+    ..+.+++..|+. +|.+|++   ++|+++.
T Consensus       235 G~~Pf~~~~~---~~~~~~i---~~~~~~~~~~~~-~--~~s----~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         235 GYPPFCSDNP---QETYRKI---INWKETLQFPDE-V--PLS----PEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             CCCCCCCCCH---HHHHHHH---HcCCCccCCCCC-C--CCC----HHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            9999854322   1111111   110000001000 0  111    234567778886 9999998   8887763

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=2.5e-37  Score=327.94  Aligned_cols=253  Identities=21%  Similarity=0.258  Sum_probs=198.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|.+.+.||+|+||.||+++.. +++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            47899999999999999999985 5889999998653   2234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++....  ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+...
T Consensus        81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence            9999999999996542  35888999999999999999999988   999999999999999999999999999876433


Q ss_pred             CCcccccccccccCccCccccc------cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYAS------DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~------~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      ... ......||+.|+|||++.      ...++.++|||||||++|||++|+.||.....   .....   .........
T Consensus       156 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~~~~~---~i~~~~~~~  228 (330)
T cd05601         156 KMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS---AKTYN---NIMNFQRFL  228 (330)
T ss_pred             Cce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH---HHHHH---HHHcCCCcc
Confidence            221 222356899999999986      45678999999999999999999999754222   11111   111111111


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+.+     ..  .....+.+++..|++ +|.+||++++++..
T Consensus       229 ~~~~-----~~--~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         229 KFPE-----DP--KVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             CCCC-----CC--CCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            1100     00  011235567788998 99999999999853

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.5e-36  Score=318.02  Aligned_cols=263  Identities=29%  Similarity=0.423  Sum_probs=206.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeC--------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA--------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHG  455 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  455 (706)
                      .++|.+.+.||+|+||.||+++..        ++..||+|.+... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            467889999999999999999741        2457899988643 344567889999999999 899999999999999


Q ss_pred             CeeEEEEecCCCCChhhhhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQER-------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                      ...++||||+++++|.+++.....             ...+++..+..++.||++||.|||+.+   ++||||||+||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili  170 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV  170 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence            999999999999999999975321             235788889999999999999999987   9999999999999


Q ss_pred             cCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchh
Q 005236          523 DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLN  601 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~  601 (706)
                      ++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..|+.....   ..
T Consensus       171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~  247 (304)
T cd05101         171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---EE  247 (304)
T ss_pred             cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH---HH
Confidence            9999999999999987644333222333456778999999998899999999999999999998 7777643211   11


Q ss_pred             HHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCCC
Q 005236          602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLP  667 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~~  667 (706)
                      ..    .............         .....+.+++..||+.+|.+||++.||++.|+.+..+.
T Consensus       248 ~~----~~~~~~~~~~~~~---------~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~  300 (304)
T cd05101         248 LF----KLLKEGHRMDKPA---------NCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT  300 (304)
T ss_pred             HH----HHHHcCCcCCCCC---------CCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence            11    1111111111100         11234667899999999999999999999998875543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=1.3e-36  Score=328.11  Aligned_cols=262  Identities=27%  Similarity=0.408  Sum_probs=203.3

Q ss_pred             hccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCC
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGE  456 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~  456 (706)
                      ..++|.+.++||+|+||.||+|++.      .++.||||++.... ....+.+.+|+.++.++. ||||+++++++....
T Consensus        35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~  114 (401)
T cd05107          35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG  114 (401)
T ss_pred             cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence            3357888999999999999999863      24679999997542 333457889999999997 999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhcccc---------------------------------------------------------
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQER---------------------------------------------------------  479 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~---------------------------------------------------------  479 (706)
                      ..++||||+++|+|.++++....                                                         
T Consensus       115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (401)
T cd05107         115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD  194 (401)
T ss_pred             CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence            99999999999999999965321                                                         


Q ss_pred             --------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEE
Q 005236          480 --------------------------------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVL  521 (706)
Q Consensus       480 --------------------------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nil  521 (706)
                                                            ...+++..++.++.||+.||+|||+.+   ++||||||+|||
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiL  271 (401)
T cd05107         195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVL  271 (401)
T ss_pred             chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEE
Confidence                                                  123677788899999999999999887   999999999999


Q ss_pred             EcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCch
Q 005236          522 LDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKL  600 (706)
Q Consensus       522 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~  600 (706)
                      +++++.+||+|||+++.+.............++..|+|||.+.+..++.++||||||+++|||++ |+.|+......+  
T Consensus       272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~--  349 (401)
T cd05107         272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE--  349 (401)
T ss_pred             EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH--
Confidence            99999999999999987533222222222456789999999998899999999999999999998 888865432211  


Q ss_pred             hHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          601 NLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                       ..   ......+......     ..    ....+.+++..||+.+|.+||+++||++.|+.++
T Consensus       350 -~~---~~~~~~~~~~~~p-----~~----~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         350 -QF---YNAIKRGYRMAKP-----AH----ASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             -HH---HHHHHcCCCCCCC-----CC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence             11   1111111110000     01    1235667888999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5.3e-37  Score=318.21  Aligned_cols=263  Identities=25%  Similarity=0.409  Sum_probs=201.0

Q ss_pred             cCCCccceeccCCceeEEEEEe-----CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~  459 (706)
                      .+|++.+.||+|+||.||++..     ..+..||+|++........+.+.+|+.++++++||||+++++++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            5788999999999999999974     34788999999877667778899999999999999999999987543  4678


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +||||+++++|.+++...  ...+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+
T Consensus        84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            999999999999999543  235889999999999999999999988   999999999999999999999999999876


Q ss_pred             CCCCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC--------Cc-hhHHHHHHHH
Q 005236          540 GGDETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSD--------NK-LNLIRHAWKL  609 (706)
Q Consensus       540 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~--------~~-~~~~~~~~~~  609 (706)
                      ....... ......++..|+|||++.+..++.++||||||+++|||++|..++......        .. ..........
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05081         159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIEL  238 (284)
T ss_pred             cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHH
Confidence            4322211 111223445699999999889999999999999999999987764321110        00 0000001111


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ........         ........+.+++.+||+.+|++|||++||++.|+.+
T Consensus       239 ~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         239 LKNNGRLP---------APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HhcCCcCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            11111000         0001123567899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-37  Score=332.60  Aligned_cols=253  Identities=22%  Similarity=0.272  Sum_probs=194.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||.||+++.. +++.||||++.+.   .....+.+.+|+.++++++||||+++++++.+....++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            47899999999999999999874 5889999998653   2334567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+...
T Consensus        81 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~  154 (377)
T cd05629          81 EFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ  154 (377)
T ss_pred             eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence            999999999998643   34788888999999999999999988   999999999999999999999999999643210


Q ss_pred             CC------------cc---------------------------------cccccccccCccCccccccCCCCcchhhHHH
Q 005236          543 ET------------EG---------------------------------NTNRVVGTYGYMAPEYASDGQFSVKSDVFSF  577 (706)
Q Consensus       543 ~~------------~~---------------------------------~~~~~~gt~~y~aPE~~~~~~~s~~sDv~Sl  577 (706)
                      ..            ..                                 ......||+.|+|||++.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  234 (377)
T cd05629         155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL  234 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence            00            00                                 0012468999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCC---CChh
Q 005236          578 GILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDR---PCMP  654 (706)
Q Consensus       578 Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R---Pt~~  654 (706)
                      ||++|||++|+.||.....   ........   .......+.+     ...  ....+.+++..||+ +|.+|   |++.
T Consensus       235 Gvil~elltG~~Pf~~~~~---~~~~~~i~---~~~~~~~~p~-----~~~--~s~~~~dli~~lL~-~~~~r~~r~~~~  300 (377)
T cd05629         235 GAIMFECLIGWPPFCSENS---HETYRKII---NWRETLYFPD-----DIH--LSVEAEDLIRRLIT-NAENRLGRGGAH  300 (377)
T ss_pred             chhhhhhhcCCCCCCCCCH---HHHHHHHH---ccCCccCCCC-----CCC--CCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence            9999999999999854322   11111111   1000000100     000  11235578888997 66665   5888


Q ss_pred             HHHHH
Q 005236          655 SVILM  659 (706)
Q Consensus       655 ev~~~  659 (706)
                      |++..
T Consensus       301 ~~l~h  305 (377)
T cd05629         301 EIKSH  305 (377)
T ss_pred             HHhcC
Confidence            88875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=7.4e-37  Score=323.27  Aligned_cols=244  Identities=25%  Similarity=0.341  Sum_probs=190.7

Q ss_pred             CCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHH---hhcCCcceeeeEeEEEeCCeeEEE
Q 005236          389 FSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILF---SKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      |++.+.||+|+||.||+|... +++.||||++...   .....+.+..|+.++   +.++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            677899999999999999875 5889999998653   223345666676654   567899999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|..++..    ..+++..+..++.||+.||.|||+.+   ++||||||+|||+++++.+||+|||+++....
T Consensus        81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~  153 (324)
T cd05589          81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG  153 (324)
T ss_pred             EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence            999999999988843    35899999999999999999999988   99999999999999999999999999875322


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      .  ........|++.|+|||.+.+..++.++|||||||++|||++|+.||.....   ......   .. ..... .   
T Consensus       154 ~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~---~~~~~~---i~-~~~~~-~---  220 (324)
T cd05589         154 F--GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE---EEVFDS---IV-NDEVR-Y---  220 (324)
T ss_pred             C--CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH---HHHHHH---HH-hCCCC-C---
Confidence            1  1122345789999999999999999999999999999999999999754321   111111   11 11110 0   


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~  658 (706)
                        ....    ...+.+++.+||+.||.+||+     +.++++
T Consensus       221 --p~~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         221 --PRFL----SREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             --CCCC----CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence              0011    123567899999999999994     566654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.1e-36  Score=312.49  Aligned_cols=257  Identities=26%  Similarity=0.453  Sum_probs=204.8

Q ss_pred             cCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      ++|.+.+.||+|+||.||+|....      +..||+|.+... .......+.+|+.++..++||||+++++++......+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            578899999999999999998743      367999998653 3344567889999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccc-------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          460 LIYEFMPNKSLDSFIFDQER-------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                      +||||+++++|.+++.....       ...+++..++.++.||+.||.|||+.+   ++||||||+||++++++.+||+|
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~d  162 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIGD  162 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEECC
Confidence            99999999999999965321       234788899999999999999999887   99999999999999999999999


Q ss_pred             eccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhh
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      ||+++.+.............++..|+|||.+.+..++.++||||||+++|||++ |+.|+.....   .......    .
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~~~~----~  235 (277)
T cd05032         163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---EEVLKFV----I  235 (277)
T ss_pred             cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---HHHHHHH----h
Confidence            999987644332222233456789999999998899999999999999999998 8888743222   1111111    1


Q ss_pred             cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          612 EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       612 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      .........     ..    ...+.+++..||+.+|.+|||+.++++.|+.
T Consensus       236 ~~~~~~~~~-----~~----~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         236 DGGHLDLPE-----NC----PDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             cCCCCCCCC-----CC----CHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence            111111111     11    2356789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.2e-36  Score=317.19  Aligned_cols=259  Identities=30%  Similarity=0.441  Sum_probs=204.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  457 (706)
                      .++|++.+.||+|+||.||++....      ...+|+|.+... .......+.+|+.++.++ +||||+++++++..+..
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   90 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP   90 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence            3678899999999999999998743      357899988653 344456788999999999 79999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcc-------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC
Q 005236          458 KLLIYEFMPNKSLDSFIFDQ-------------ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ  524 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~  524 (706)
                      .+++|||+++++|.+++...             .....+++..++.++.|++.||+|||+.+   |+||||||+||++++
T Consensus        91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~~  167 (293)
T cd05053          91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVTE  167 (293)
T ss_pred             eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEcC
Confidence            99999999999999999643             22346889999999999999999999887   999999999999999


Q ss_pred             CCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHH
Q 005236          525 DMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLI  603 (706)
Q Consensus       525 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~  603 (706)
                      ++.+||+|||+++.+.............++..|+|||++.+..++.++|||||||++|||++ |..|+.....   ....
T Consensus       168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~  244 (293)
T cd05053         168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---EELF  244 (293)
T ss_pred             CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH---HHHH
Confidence            99999999999987643322222222345678999999999999999999999999999998 8888643221   1111


Q ss_pred             HHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          604 RHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       604 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                          ...........         .......+.+++.+|++.+|.+|||+.|+++.|+.+
T Consensus       245 ----~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         245 ----KLLKEGYRMEK---------PQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             ----HHHHcCCcCCC---------CCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence                11111111110         011123566899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=1.4e-36  Score=314.40  Aligned_cols=259  Identities=27%  Similarity=0.410  Sum_probs=205.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEe-CCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIH-GEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~  458 (706)
                      .++|.+.+.||+|+||.||+|...+     +..|++|++... .....+.+.+|+.++++++||||+++++++.. +...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            4688999999999999999999865     678999988653 34456778999999999999999999998876 4678


Q ss_pred             EEEEecCCCCChhhhhhccccc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeee
Q 005236          459 LLIYEFMPNKSLDSFIFDQERC-----KLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDF  533 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df  533 (706)
                      ++++||+++++|.+++......     ..+++..++.++.|++.||+|||+.+   ++|+||||+||++++++.+||+||
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence            9999999999999999654322     46889999999999999999999887   999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhc
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNE  612 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~  612 (706)
                      |+++.+.............++..|+|||++.+..++.++||||||+++||+++ |+.|+....   .......    ...
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---~~~~~~~----~~~  234 (280)
T cd05043         162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID---PFEMAAY----LKD  234 (280)
T ss_pred             CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC---HHHHHHH----HHc
Confidence            99986543322222222345778999999998899999999999999999999 999875322   1222111    111


Q ss_pred             CCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       613 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .......     ..    ....+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus       235 ~~~~~~~-----~~----~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~  276 (280)
T cd05043         235 GYRLAQP-----IN----CPDELFAVMACCWALDPEERPSFSQLVQCLTDF  276 (280)
T ss_pred             CCCCCCC-----Cc----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            1110000     00    112466899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.9e-36  Score=313.29  Aligned_cols=247  Identities=26%  Similarity=0.327  Sum_probs=192.8

Q ss_pred             eccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          395 LGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       395 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      ||+|+||+||++... +++.+|+|++....   ....+.+..|+.++++++||||+++.+++......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            799999999999875 57899999986532   23346678899999999999999999999999999999999999999


Q ss_pred             hhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccccc
Q 005236          471 DSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN  549 (706)
Q Consensus       471 ~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~  549 (706)
                      ..++.... ....+++..++.++.||+.||+|||+.+   |+||||||+||++++++.+||+|||++..+.....  ...
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~  155 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK  155 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence            98885432 3346889999999999999999999987   99999999999999999999999999987543222  222


Q ss_pred             ccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCH
Q 005236          550 RVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNL  629 (706)
Q Consensus       550 ~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  629 (706)
                      ...||+.|+|||++.+..++.++||||||+++|||++|+.||...........  ........ .. .+     ...   
T Consensus       156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~--~~~~~~~~-~~-~~-----~~~---  223 (280)
T cd05608         156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE--LKQRILND-SV-TY-----PDK---  223 (280)
T ss_pred             ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHH--HHHhhccc-CC-CC-----ccc---
Confidence            35689999999999999999999999999999999999999864332211111  11111111 00 00     001   


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCC-----ChhHHHHH
Q 005236          630 AEVIRCIHIGLLCVQQYPEDRP-----CMPSVILM  659 (706)
Q Consensus       630 ~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~~  659 (706)
                       ....+.+++..||+.+|++||     +++++++.
T Consensus       224 -~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         224 -FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             -CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence             122456788999999999999     66666653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1.6e-36  Score=318.37  Aligned_cols=260  Identities=29%  Similarity=0.419  Sum_probs=202.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC--------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHG  455 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  455 (706)
                      .++|.+.+.||+|+||.||+++...        ...+|+|.+... .......+..|+.+++++ +||||+++++++...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            3679999999999999999997532        346999998753 344556788999999999 799999999999999


Q ss_pred             CeeEEEEecCCCCChhhhhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQER-------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                      +..++||||+++++|.+++.....             ...+++..+++++.|++.||+|||+.+   ++||||||+||++
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill  173 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  173 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence            999999999999999999975421             134788999999999999999999887   9999999999999


Q ss_pred             cCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchh
Q 005236          523 DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLN  601 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~  601 (706)
                      +.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.|+.....   ..
T Consensus       174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~---~~  250 (307)
T cd05098         174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---EE  250 (307)
T ss_pred             cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH---HH
Confidence            9999999999999986543222112222334578999999999999999999999999999998 7787643221   11


Q ss_pred             HHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      ...    ........+...         .....+.+++..||+.+|.+||+|.+|++.|+.+.
T Consensus       251 ~~~----~~~~~~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         251 LFK----LLKEGHRMDKPS---------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             HHH----HHHcCCCCCCCC---------cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            111    111111111100         11235667899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=3.7e-37  Score=331.03  Aligned_cols=254  Identities=19%  Similarity=0.234  Sum_probs=198.3

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ..++|++.++||+|+||.||+++.. .++.||+|.+.+.   .....+.+.+|+.+++.++||||+++++++.++...++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            3468999999999999999999985 4789999998642   22334567889999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++|+|.+++...    .++...+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++...
T Consensus       121 v~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         121 VMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            99999999999998542    3677888899999999999999988   9999999999999999999999999998754


Q ss_pred             CCCCcccccccccccCccCccccccC----CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDG----QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      .... .......||+.|+|||++.+.    .++.++|||||||++|||++|+.||......   .....   ........
T Consensus       194 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~~~~---i~~~~~~~  266 (370)
T cd05596         194 ANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV---GTYSK---IMDHKNSL  266 (370)
T ss_pred             CCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH---HHHHH---HHcCCCcC
Confidence            3221 122345799999999998653    4789999999999999999999998643221   11111   11111110


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCC--CCChhHHHHH
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPED--RPCMPSVILM  659 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--RPt~~ev~~~  659 (706)
                      .+.+     ..  .....+.+++..||+.+|.+  ||+++|++..
T Consensus       267 ~~~~-----~~--~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         267 TFPD-----DI--EISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             CCCC-----cC--CCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            1100     00  01134567889999999987  9999999764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.7e-36  Score=316.65  Aligned_cols=260  Identities=27%  Similarity=0.413  Sum_probs=201.9

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-C--cEEEEEEcCc-cchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-E--QEIAVKRLSK-ISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~--~~vavK~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.+.||+|+||.||+|...+ +  ..+++|.++. ......+.+.+|+.++.++ +||||+++++++......++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            578999999999999999998854 3  2478888864 3344567789999999999 799999999999999999999


Q ss_pred             EecCCCCChhhhhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          462 YEFMPNKSLDSFIFDQE-------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      |||+++++|.+++....             ....+++..++.++.|++.||+|||+.+   ++||||||+|||+++++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence            99999999999996532             1235788999999999999999999987   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+|||++......   ........+..|+|||++....++.++|||||||++|||++ |+.||......   .....  
T Consensus       159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~---~~~~~--  230 (297)
T cd05089         159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA---ELYEK--  230 (297)
T ss_pred             EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH--
Confidence            99999998643111   11111233567999999998899999999999999999998 99997543221   11111  


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCCCC
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQ  668 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~~~  668 (706)
                        ...+.....     ....    ...+.+++..||+.+|.+||++.++++.|+.......
T Consensus       231 --~~~~~~~~~-----~~~~----~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~  280 (297)
T cd05089         231 --LPQGYRMEK-----PRNC----DDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK  280 (297)
T ss_pred             --HhcCCCCCC-----CCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence              111111110     0011    1245689999999999999999999999987754433

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-37  Score=321.12  Aligned_cols=258  Identities=28%  Similarity=0.442  Sum_probs=208.8

Q ss_pred             HHHhccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          382 IANATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       382 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      +.....++.+..+||-|.||.||.|.|+. ...||||.++. +....++|.+|+.+|+.++|||+|+|+|+|..+...||
T Consensus       262 WEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYI  340 (1157)
T KOG4278|consen  262 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYI  340 (1157)
T ss_pred             hhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEE
Confidence            33334567788999999999999999965 66899999965 34457899999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |.|||..|+|.+||++..+ ..++...++++|.||+.||+||..++   +|||||.++|+||.++..+|++||||+++..
T Consensus       341 iTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMt  416 (1157)
T KOG4278|consen  341 ITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMT  416 (1157)
T ss_pred             EEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhc
Confidence            9999999999999987654 55777788999999999999999887   9999999999999999999999999999986


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      .+.+.... ...-++.|.|||.+....++.|+|||+|||+||||.| |..|+...+    .   ..+..++..+...+-.
T Consensus       417 gDTYTAHA-GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid----l---SqVY~LLEkgyRM~~P  488 (1157)
T KOG4278|consen  417 GDTYTAHA-GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID----L---SQVYGLLEKGYRMDGP  488 (1157)
T ss_pred             CCceeccc-CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc----H---HHHHHHHhccccccCC
Confidence            65443322 2344679999999999999999999999999999998 666643221    1   1222222222222211


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ..         +...+..|++.||+.+|.+||++.|+-+.++
T Consensus       489 eG---------CPpkVYeLMraCW~WsPsDRPsFaeiHqafE  521 (1157)
T KOG4278|consen  489 EG---------CPPKVYELMRACWNWSPSDRPSFAEIHQAFE  521 (1157)
T ss_pred             CC---------CCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence            11         2336778999999999999999999877665

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.9e-37  Score=307.74  Aligned_cols=269  Identities=22%  Similarity=0.308  Sum_probs=206.6

Q ss_pred             HhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHh--hcCCcceeeeEeEEEeCC----e
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFS--KLQHRNLVKLLGCCIHGE----E  457 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~--~l~h~niv~l~~~~~~~~----~  457 (706)
                      ....+..+.+.||+|.||.||+|.+ .|+.||||++....+.   .+.+|.++++  .|+|+||+.+++.-..+.    .
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~---SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ  283 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDER---SWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ  283 (513)
T ss_pred             hhhheeEEEEEecCccccceeeccc-cCCceEEEEecccchh---hhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence            3346788999999999999999999 4779999999765544   4555666654  569999999999876543    6


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHh-----CCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ-----DSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-----~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                      ++||.+|.+.|||.+||.+    ..++....++++..+|.||++||-     ++++.|.|||||++||||..++.+.|+|
T Consensus       284 LwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD  359 (513)
T KOG2052|consen  284 LWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  359 (513)
T ss_pred             EEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence            7999999999999999954    458999999999999999999994     4788899999999999999999999999


Q ss_pred             eccccccCCC--CCcccccccccccCccCccccccC----CC--CcchhhHHHHHHHHHHHh----C------CCCCCCC
Q 005236          533 FGLARAFGGD--ETEGNTNRVVGTYGYMAPEYASDG----QF--SVKSDVFSFGILLLEIVS----G------KKNRGFY  594 (706)
Q Consensus       533 fgla~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~----~~--s~~sDv~SlGvil~ellt----G------~~p~~~~  594 (706)
                      +|||.....+  ......+..+||.+|||||++...    .+  -..+||||||.|+||+.-    |      +.||-..
T Consensus       360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~  439 (513)
T KOG2052|consen  360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV  439 (513)
T ss_pred             ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence            9999887544  233456678999999999999653    12  136899999999999864    2      2444322


Q ss_pred             CCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          595 HSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      -+.++  -.+..++..-....+..++.+   ..+-+.+..+.+++..||..+|.-|-|+--+-+.|.++..
T Consensus       440 Vp~DP--s~eeMrkVVCv~~~RP~ipnr---W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  440 VPSDP--SFEEMRKVVCVQKLRPNIPNR---WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             CCCCC--CHHHHhcceeecccCCCCCcc---cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            22221  122222222223333333333   3345677788899999999999999999999998887643

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=4.9e-36  Score=310.16  Aligned_cols=251  Identities=25%  Similarity=0.370  Sum_probs=198.4

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.++||+|+||.||+|.. .+++.||+|.+... .....+.+.+|+.++++++||||+++++.+...+..++||||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3678889999999999999987 45788999988643 344456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|..+.       .+++..+..++.|++.||.|||+.+   |+|+||||+|||++.++.+||+|||++..+...  
T Consensus        81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--  148 (279)
T cd06619          81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--  148 (279)
T ss_pred             CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence            9999997543       3677888899999999999999988   999999999999999999999999999865322  


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        ......++..|+|||++.+..++.++||||||+++|+|++|+.||..........................+.    .
T Consensus       149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  222 (279)
T cd06619         149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLP----V  222 (279)
T ss_pred             --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCC----C
Confidence              1223578999999999999999999999999999999999999986533222211111111111111111110    0


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ...    ...+.+++.+||+.+|++||+++|+++.
T Consensus       223 ~~~----~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         223 GQF----SEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             CcC----CHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            111    1245678999999999999999999865

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=6.1e-37  Score=331.52  Aligned_cols=200  Identities=24%  Similarity=0.364  Sum_probs=171.7

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .|++.++||+|+||.||+|+.. +++.||+|++....   ....+.+.+|+.++++++||||+++++.+.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            5888999999999999999974 57889999986532   3345678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++|+|.+++.+.   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..+....
T Consensus        82 ~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~  155 (382)
T cd05625          82 YIPGGDMMSLLIRM---GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH  155 (382)
T ss_pred             CCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence            99999999998653   34788888899999999999999988   9999999999999999999999999986431100


Q ss_pred             C---------------------------------------------cccccccccccCccCccccccCCCCcchhhHHHH
Q 005236          544 T---------------------------------------------EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFG  578 (706)
Q Consensus       544 ~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlG  578 (706)
                      .                                             ........||+.|+|||++.+..++.++||||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  235 (382)
T cd05625         156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG  235 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence            0                                             0001224689999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCC
Q 005236          579 ILLLEIVSGKKNRGF  593 (706)
Q Consensus       579 vil~elltG~~p~~~  593 (706)
                      |++|||++|+.||..
T Consensus       236 vil~elltG~~Pf~~  250 (382)
T cd05625         236 VILYEMLVGQPPFLA  250 (382)
T ss_pred             HHHHHHHhCCCCCCC
Confidence            999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.1e-36  Score=302.70  Aligned_cols=267  Identities=25%  Similarity=0.292  Sum_probs=203.1

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccch--hhHHHHHHHHHHHhhcCCcc-eeeeEeEEEeCC------
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISE--QGLKELKNEIILFSKLQHRN-LVKLLGCCIHGE------  456 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------  456 (706)
                      ..|...++||+|.||+||+|+. ..|+.||+|++....+  ..-....+|+.++++++|+| ||+|++++...+      
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            4567778899999999999998 4588999999865433  23456689999999999999 999999999877      


Q ss_pred             eeEEEEecCCCCChhhhhhccccc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERC-KLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                      ..++|+||++ -+|..++...... ..++...+..+..||++||+|||+++   |+||||||+||||+++|.+||+|||+
T Consensus        91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGl  166 (323)
T KOG0594|consen   91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGL  166 (323)
T ss_pred             eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccch
Confidence            7889999995 4899998665432 34666888999999999999999998   99999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      |+.+.-..  ......++|.-|.|||++.+. .|+...||||+|||+.||+++++-|......+....+-.......+..
T Consensus       167 Ara~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~  244 (323)
T KOG0594|consen  167 ARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD  244 (323)
T ss_pred             HHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence            99754211  123346789999999999886 899999999999999999999988765444222222222222222222


Q ss_pred             Ccccc---cc-----cccCcCCHHH-----HHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          615 PSQLI---DA-----CFKDSFNLAE-----VIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       615 ~~~~~---d~-----~~~~~~~~~~-----~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ++.+.   +.     .+....++..     .....+++.+||+.+|.+|.|++.++++
T Consensus       245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            22211   10     0110111111     0245788999999999999999999886

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=3.8e-36  Score=307.59  Aligned_cols=253  Identities=30%  Similarity=0.473  Sum_probs=200.8

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.++||+|+||.||+|...++..+|+|.+..... ..+.+.+|+.++++++||||+++++++. ....+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence            57889999999999999999988888999999865332 3467899999999999999999999874 456899999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++.... ...+++..+..++.|++.||+|||+.+   ++||||||+||++++++.++|+|||++..+...... 
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-  158 (260)
T cd05070          84 KGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-  158 (260)
T ss_pred             CCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCcccc-
Confidence            999999996533 234789999999999999999999987   999999999999999999999999999875432211 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.....   .......    .........     .
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~----~~~~~~~~~-----~  226 (260)
T cd05070         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---REVLEQV----ERGYRMPCP-----Q  226 (260)
T ss_pred             cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHH----HcCCCCCCC-----C
Confidence            1112335678999999988899999999999999999999 8888753221   1111111    111111110     0


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                          .....+.+++.+|++.+|.+|||+.++.+.|+.
T Consensus       227 ----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         227 ----DCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             ----cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                112346789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.2e-36  Score=315.44  Aligned_cols=267  Identities=28%  Similarity=0.346  Sum_probs=198.2

Q ss_pred             CCccceeccCCceeEEEEEe-----CCCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeEE
Q 005236          389 FSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKLL  460 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  460 (706)
                      |++.+.||+|+||+||++..     .+++.||+|.+.... ......+.+|+.++++++||||+++++++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            38889999999999988653     357789999986542 34456788999999999999999999988764  35789


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++++|.+++...    .+++..++.++.|++.||.|||+.+   ++||||||+|||+++++.+||+|||+++...
T Consensus        86 v~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  158 (283)
T cd05080          86 IMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  158 (283)
T ss_pred             EecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence            99999999999999542    3899999999999999999999987   9999999999999999999999999998764


Q ss_pred             CCCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ...... ......++..|+|||.+.+..++.++||||||+++|||++|..|+......- .................+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd05080         159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIELL  237 (283)
T ss_pred             CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhhhh
Confidence            322211 1122345667999999998899999999999999999999999865422110 00000000000000000011


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      +..............+.+++..||+.+|++|||+++|+++|+.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            10000000111123567899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=3.5e-36  Score=312.74  Aligned_cols=260  Identities=26%  Similarity=0.443  Sum_probs=202.1

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  457 (706)
                      ..++|++.++||+|+||.||+|..++      +..||+|.+.... ......+.+|+.+++.++||||+++++++.+...
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            34689999999999999999997542      4579999886432 3334567889999999999999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccc-------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          458 KLLIYEFMPNKSLDSFIFDQER-------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                      .++||||+++|+|.+++.....       ...+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence            9999999999999999965321       234567788899999999999999987   999999999999999999999


Q ss_pred             eeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHH
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKL  609 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~  609 (706)
                      +|||+++.+.............++..|+|||.+.+..++.++||||||+++|||++ |..|+.....   .....    .
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~---~~~~~----~  233 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---EQVLK----F  233 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHH----H
Confidence            99999986543322222222345678999999999999999999999999999999 6777643221   11111    1


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...+......     ..    ....+.+++.+||+.+|.+|||+.++++.|+..
T Consensus       234 ~~~~~~~~~~-----~~----~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         234 VMDGGYLDQP-----DN----CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             HHcCCCCCCC-----CC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            1111111110     01    123567899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=7.5e-37  Score=328.27  Aligned_cols=254  Identities=19%  Similarity=0.240  Sum_probs=195.7

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ..++|++.+.||+|+||.||+++... ++.+|+|.+.+.   .....+.+.+|+.+++.++||||+++++++.++...++
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            44789999999999999999999854 788999998642   22334567899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++|+|.+++...    .+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.
T Consensus       121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~  193 (370)
T cd05621         121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecc
Confidence            99999999999998542    3788888999999999999999988   9999999999999999999999999998763


Q ss_pred             CCCCcccccccccccCccCccccccCC----CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQ----FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      .... .......||+.|+|||++....    ++.++||||+||++|||++|+.||.....   .....   .........
T Consensus       194 ~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~---~~~~~---~i~~~~~~~  266 (370)
T cd05621         194 ETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL---VGTYS---KIMDHKNSL  266 (370)
T ss_pred             cCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH---HHHHH---HHHhCCccc
Confidence            2211 1223467999999999997643    78899999999999999999999854321   11111   111111110


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCC--CCChhHHHHH
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPED--RPCMPSVILM  659 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--RPt~~ev~~~  659 (706)
                      .+..     .  ..-...+.+++..||+.++.+  ||+++|+++.
T Consensus       267 ~~p~-----~--~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         267 NFPE-----D--VEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             CCCC-----c--ccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            1100     0  011123456777888755543  8899999876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=7.4e-37  Score=323.27  Aligned_cols=241  Identities=24%  Similarity=0.311  Sum_probs=191.3

Q ss_pred             CCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCc-ceeeeEeEEEeCCeeEEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHR-NLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lV~  462 (706)
                      +|++.+.||+|+||.||+|+..+ ++.||||++...   .....+.+..|..++..++|+ +|+++++++.+.+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            47889999999999999999854 678999998653   234456788899999999765 5888999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        81 E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05587          81 EYVNGGDLMYHIQQV---GKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG  154 (324)
T ss_pred             cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence            999999999988543   34788899999999999999999987   999999999999999999999999998753211


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ........    .... .+    
T Consensus       155 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~i~----~~~~-~~----  220 (324)
T cd05587         155 G--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE---DELFQSIM----EHNV-SY----  220 (324)
T ss_pred             C--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHH----cCCC-CC----
Confidence            1  122345789999999999999999999999999999999999999854322   11111111    1111 00    


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM  653 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~  653 (706)
                       ....+    ..+.+++.+||+.+|.+||+.
T Consensus       221 -~~~~~----~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         221 -PKSLS----KEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             -CCCCC----HHHHHHHHHHhhcCHHHcCCC
Confidence             01111    245678899999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=2.4e-36  Score=310.21  Aligned_cols=259  Identities=25%  Similarity=0.375  Sum_probs=205.4

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||+++. .+++.++||.+...   .....+.+.+|+.+++.++||||+++++++.+++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            5788899999999999999997 46889999987542   3334567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          463 EFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      ||+++++|.+++.... ....+++..++.++.||++||.|||+.+   ++|+||||+||+++.++.++|+|||++.....
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            9999999999986422 2346889999999999999999999987   99999999999999999999999999887543


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ...  ......++..|+|||++.+..++.++||||||+++|||++|..|+...... ......    ...........  
T Consensus       159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~----~~~~~~~~~~~--  229 (267)
T cd08229         159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCK----KIEQCDYPPLP--  229 (267)
T ss_pred             CCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHhh----hhhcCCCCCCC--
Confidence            221  112346888999999999989999999999999999999999997432211 111111    11111111110  


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                        ..    .....+.+++.+||+.+|.+||||.+|+++++..
T Consensus       230 --~~----~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         230 --SD----HYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             --cc----cccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence              00    1123466788999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.9e-36  Score=320.59  Aligned_cols=248  Identities=21%  Similarity=0.325  Sum_probs=193.9

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+++.. +++.||||+++..   .....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            47999999999999985 5789999998653   233456688899999888 799999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|..++...   ..+++..+..++.||+.||.|||+.+   ++||||||+|||++.++.+||+|||+++.....  ...
T Consensus        81 g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~  152 (329)
T cd05588          81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--GDT  152 (329)
T ss_pred             CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC--CCc
Confidence            9999888543   35899999999999999999999988   999999999999999999999999998753111  112


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC--chhHHHHHHHHhhcCCCcccccccccC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN--KLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+  .........+........ +     ..
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----p~  226 (329)
T cd05588         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR-I-----PR  226 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC-C-----CC
Confidence            234578999999999999999999999999999999999999986432221  111111222222222111 1     11


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCC------hhHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPC------MPSVIL  658 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt------~~ev~~  658 (706)
                      ..+    ..+.+++.+||+.||.+||+      ++++++
T Consensus       227 ~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         227 SLS----VKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             CCC----HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            111    24567889999999999998      567664

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=2.2e-36  Score=318.14  Aligned_cols=241  Identities=26%  Similarity=0.339  Sum_probs=189.2

Q ss_pred             ceeccCCceeEEEEEeCC-CcEEEEEEcCccc---hhhHHHHHHHHHHHhh-cCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS---EQGLKELKNEIILFSK-LQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+|+... ++.||||+++...   ....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            479999999999999854 7889999986531   2334556677888776 4899999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|.+++...   ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....  ...
T Consensus        81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~  152 (316)
T cd05619          81 GDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--DAK  152 (316)
T ss_pred             CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCC--CCc
Confidence            9999998543   34788899999999999999999987   999999999999999999999999998753211  112


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   .......    ....+  .+.    ...
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~~~~i----~~~~~--~~~----~~~  219 (316)
T cd05619         153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---EELFQSI----RMDNP--CYP----RWL  219 (316)
T ss_pred             eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH---HHHHHHH----HhCCC--CCC----ccC
Confidence            2345689999999999999999999999999999999999999854322   1111111    11111  011    111


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChh-HHHH
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMP-SVIL  658 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~-ev~~  658 (706)
                      +    ..+.+++.+||+.+|.+||++. ++.+
T Consensus       220 ~----~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         220 T----REAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             C----HHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            1    2456788999999999999997 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=4.4e-36  Score=310.51  Aligned_cols=259  Identities=27%  Similarity=0.383  Sum_probs=201.8

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCc----EEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQ----EIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.++||+|+||.||+|++. ++.    .||+|.+... .....+.+.+|+.++..++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            57888999999999999999863 343    4899998653 44456788999999999999999999999875 45789


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      +|||+++|+|.+++....  ..+++..++.++.||+.||+|||+.+   ++||||||+|||+++++.+||+|||+++.+.
T Consensus        86 ~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109          86 VTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             EEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecc
Confidence            999999999999986532  45889999999999999999999987   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ............++..|+|||.+.+..++.++||||||+++|||++ |..|+.....   ......    +.........
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~----~~~~~~~~~~  233 (279)
T cd05109         161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---REIPDL----LEKGERLPQP  233 (279)
T ss_pred             cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH----HHCCCcCCCC
Confidence            3322212222345678999999999999999999999999999998 8888753221   111111    1111111110


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLP  667 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~~  667 (706)
                      .     .    ....+.+++..||+.+|++||++.++++.|+.....|
T Consensus       234 ~-----~----~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         234 P-----I----CTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             c-----c----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            0     1    1224567899999999999999999999998765443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=4.2e-36  Score=314.26  Aligned_cols=259  Identities=31%  Similarity=0.453  Sum_probs=203.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  457 (706)
                      .++|.+.+.||+|+||.||++...      .+..||||.++.. .....+.+.+|+.+++++ +||||+++++++...+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            357999999999999999999752      2457999988754 334456789999999999 79999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+++++|.+++.... ...+++..+..++.|++.||+|||+.+   ++|+||||+|||++.++.+||+|||+++
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence            999999999999999996533 234799999999999999999999987   9999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      .+.............++..|+|||.+.+..++.++||||||+++|||++ |+.|+.......   ..   ......+...
T Consensus       190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~---~~---~~~~~~~~~~  263 (302)
T cd05055         190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS---KF---YKLIKEGYRM  263 (302)
T ss_pred             cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH---HH---HHHHHcCCcC
Confidence            7643322112222346788999999999999999999999999999998 888865332211   11   1111111111


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..     ...    ....+.+++.+||+.+|++||++.||++.|+..
T Consensus       264 ~~-----~~~----~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         264 AQ-----PEH----APAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CC-----CCC----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            00     001    113567899999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4.3e-36  Score=307.54  Aligned_cols=253  Identities=28%  Similarity=0.434  Sum_probs=200.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.++||+|+||.||+|++.+...||+|++.... ...+.+.+|+.++++++||||+++++.+. ....++||||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   83 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence            5699999999999999999998777789999987532 23467899999999999999999999874 456799999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++.... ...+++..+..++.|+++||+|||+.+   ++|+||||+||++++++.+||+|||.++.+...... 
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-  158 (262)
T cd05071          84 KGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-  158 (262)
T ss_pred             CCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccccccc-
Confidence            999999996532 245789999999999999999999987   999999999999999999999999999866432211 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......++..|+|||++.+..++.++||||||+++|||++ |+.||.....   ......    ........        
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~---~~~~~~----~~~~~~~~--------  223 (262)
T cd05071         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REVLDQ----VERGYRMP--------  223 (262)
T ss_pred             cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh---HHHHHH----HhcCCCCC--------
Confidence            1122346678999999998899999999999999999999 7777653221   111111    11111100        


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                       ........+.+++.+|++.+|++||++++++++|+.
T Consensus       224 -~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         224 -CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             -CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence             011122356789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=5.1e-37  Score=331.45  Aligned_cols=253  Identities=21%  Similarity=0.288  Sum_probs=193.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .+|++.++||+|+||.||+++.. .++.||||.+.+..   ....+.+.+|+.++++++||||+++++.+.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36899999999999999999975 47899999986532   233467889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..++...+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..+...
T Consensus        81 E~~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~  154 (376)
T cd05598          81 DYIPGGDMMSLLIRL---GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  154 (376)
T ss_pred             eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence            999999999999653   34788888899999999999999988   999999999999999999999999998533100


Q ss_pred             CC-----------------------------------------cccccccccccCccCccccccCCCCcchhhHHHHHHH
Q 005236          543 ET-----------------------------------------EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILL  581 (706)
Q Consensus       543 ~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil  581 (706)
                      ..                                         ........||+.|+|||++.+..++.++|||||||++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  234 (376)
T cd05598         155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  234 (376)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence            00                                         0001124699999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCC---ChhHHHH
Q 005236          582 LEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP---CMPSVIL  658 (706)
Q Consensus       582 ~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP---t~~ev~~  658 (706)
                      |||++|+.||......+   ...... .+...  ..+..   .....    ..+.+++..|+ .+|.+|+   ++.|+++
T Consensus       235 yell~G~~Pf~~~~~~~---~~~~i~-~~~~~--~~~~~---~~~~s----~~~~~li~~l~-~~p~~R~~~~t~~ell~  300 (376)
T cd05598         235 YEMLVGQPPFLADTPAE---TQLKVI-NWETT--LHIPS---QAKLS----REASDLILRLC-CGAEDRLGKNGADEIKA  300 (376)
T ss_pred             eehhhCCCCCCCCCHHH---HHHHHh-ccCcc--ccCCC---CCCCC----HHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence            99999999986433211   111110 00000  00000   01111    12345566665 4999999   7888875


Q ss_pred             H
Q 005236          659 M  659 (706)
Q Consensus       659 ~  659 (706)
                      .
T Consensus       301 h  301 (376)
T cd05598         301 H  301 (376)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=4.3e-36  Score=312.06  Aligned_cols=258  Identities=27%  Similarity=0.446  Sum_probs=202.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      .++|++.+.||+|+||.||++...      .+..||+|.+... .....+.+.+|+.++++++||||+++++++..+...
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            367899999999999999999864      3678999998653 344457799999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhccc-------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCc
Q 005236          459 LLIYEFMPNKSLDSFIFDQE-------------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASN  519 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~N  519 (706)
                      ++||||+++++|.+++....                   ....+++..++.++.|++.||.|||+.+   ++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence            99999999999999996431                   1124678889999999999999999987   9999999999


Q ss_pred             EEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCC
Q 005236          520 VLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDN  598 (706)
Q Consensus       520 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~  598 (706)
                      |++++++.+||+|||+++.+..............+..|+|||.+.+..++.++|||||||++|||++ |..|+.....  
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~--  238 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH--  238 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence            9999999999999999886543322222222344678999999998999999999999999999998 7777642211  


Q ss_pred             chhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                       .+..    ............+         .....+.+++.+||+.+|.+|||+.||++.|+.
T Consensus       239 -~~~~----~~~~~~~~~~~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         239 -EEVI----YYVRDGNVLSCPD---------NCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             -HHHH----HHHhcCCCCCCCC---------CCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence             1111    1111121111100         112356789999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=6.8e-36  Score=306.73  Aligned_cols=259  Identities=26%  Similarity=0.378  Sum_probs=206.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc---cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||+|... +++.+|+|.++.   ......+.+.+|+.++++++|+||+++++++...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57999999999999999999986 788999998753   23334678899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          463 EFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      ||+++++|..++.... ....+++..++.++.+++.||.|||+.+   ++|+||+|+||+++.++.++|+|||+++.+..
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            9999999999986532 2345789999999999999999999987   99999999999999999999999999886533


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ...  ......++..|+|||.+.+..++.++||||||+++|+|++|+.|+..... .......    ....+....... 
T Consensus       159 ~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~----~~~~~~~~~~~~-  230 (267)
T cd08224         159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCK----KIEKCDYPPLPA-  230 (267)
T ss_pred             CCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-cHHHHHh----hhhcCCCCCCCh-
Confidence            221  12234678899999999988999999999999999999999999743221 1111111    111111111100 


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                             ......+.+++.+||+.+|.+||++.+|+++|++.
T Consensus       231 -------~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         231 -------DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             -------hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence                   01123456789999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=9.5e-37  Score=322.30  Aligned_cols=241  Identities=24%  Similarity=0.310  Sum_probs=191.1

Q ss_pred             CCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      +|.+.+.||+|+||.||+|+... ++.||||.+.+.   .....+.+..|..++..+ +|++|+++++++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            47888999999999999999854 678999998653   223345667788888777 5899999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.....
T Consensus        81 E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~  154 (323)
T cd05616          81 EYVNGGDLMYQIQQV---GRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD  154 (323)
T ss_pred             cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence            999999999988543   34788999999999999999999987   999999999999999999999999999754221


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ........    .... .+ .  
T Consensus       155 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~~~~i~----~~~~-~~-p--  221 (323)
T cd05616         155 G--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQSIM----EHNV-AY-P--  221 (323)
T ss_pred             C--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---HHHHHHHH----hCCC-CC-C--
Confidence            1  122345789999999999999999999999999999999999999864322   12211111    1111 00 0  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM  653 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~  653 (706)
                        ...    ...+.+++.+||+.+|.+|++.
T Consensus       222 --~~~----s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         222 --KSM----SKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             --CcC----CHHHHHHHHHHcccCHHhcCCC
Confidence              011    1245678899999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=6.8e-36  Score=304.75  Aligned_cols=250  Identities=25%  Similarity=0.383  Sum_probs=202.8

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|++.+.||+|++|.||+|+.. +++.|++|.+..  ......+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            4778899999999999999985 578899998754  2445567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++.... ...+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||+++.+.....
T Consensus        81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~  156 (256)
T cd08529          81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN  156 (256)
T ss_pred             CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence            99999999997542 346889999999999999999999887   99999999999999999999999999987643322


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        ......+++.|+|||++.+..++.++||||||+++|||++|+.|+....   .......    ........+..    
T Consensus       157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~----~~~~~~~~~~~----  223 (256)
T cd08529         157 --FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN---QGALILK----IIRGVFPPVSQ----  223 (256)
T ss_pred             --hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---HHHHHHH----HHcCCCCCCcc----
Confidence              1223467889999999999999999999999999999999999975432   1111111    11111111111    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                           .....+.+++.+||+.+|++||++.++++.
T Consensus       224 -----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         224 -----MYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             -----ccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence                 112346789999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=5.7e-36  Score=309.25  Aligned_cols=249  Identities=26%  Similarity=0.320  Sum_probs=193.0

Q ss_pred             eccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          395 LGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       395 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      ||+|+||.||+++.+ +++.+|+|++....   ......+..|++++++++||||+++++.+..+...++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            799999999999875 48899999986421   12234556799999999999999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccc
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR  550 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  550 (706)
                      .+++.... ...+++..+..++.||+.||+|||+.+   ++||||||+||++++++.++|+|||++.......   ....
T Consensus        81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~  153 (277)
T cd05607          81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQ  153 (277)
T ss_pred             HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeec
Confidence            98886543 234788999999999999999999987   9999999999999999999999999998754321   1223


Q ss_pred             cccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHH
Q 005236          551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLA  630 (706)
Q Consensus       551 ~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  630 (706)
                      ..|+..|+|||++.+..++.++|||||||++|||++|+.||...........+  ....... .... .    ....   
T Consensus       154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~--~~~~~~~-~~~~-~----~~~~---  222 (277)
T cd05607         154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEEL--KRRTLED-EVKF-E----HQNF---  222 (277)
T ss_pred             cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHH--HHHhhcc-cccc-c----cccC---
Confidence            46899999999999989999999999999999999999997643321111111  1111111 1100 0    0011   


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          631 EVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       631 ~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                       ...+.+++..||+.+|++||+++|+++.+..
T Consensus       223 -~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~  253 (277)
T cd05607         223 -TEESKDICRLFLAKKPEDRLGSREKNDDPRK  253 (277)
T ss_pred             -CHHHHHHHHHHhccCHhhCCCCccchhhhhc
Confidence             1245688999999999999999887754443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=8.7e-36  Score=316.57  Aligned_cols=260  Identities=29%  Similarity=0.423  Sum_probs=203.4

Q ss_pred             cCCCccceeccCCceeEEEEEeCC--------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGE  456 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  456 (706)
                      .+|++.+.||+|+||.||+++...        ...||+|.+... .....+++.+|+.++.++ +||||+++++++....
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            468899999999999999997521        236899988643 344567899999999999 7999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQE-------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD  523 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~  523 (706)
                      ..+++|||+++|+|.+++....             ....+++..++.++.|++.||.|||+.+   ++||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~  168 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT  168 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence            9999999999999999996532             1234788899999999999999999987   99999999999999


Q ss_pred             CCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhH
Q 005236          524 QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNL  602 (706)
Q Consensus       524 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~  602 (706)
                      +++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..|+.....   ...
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~  245 (334)
T cd05100         169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---EEL  245 (334)
T ss_pred             CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH---HHH
Confidence            999999999999987643222222222344568999999999999999999999999999998 7787643221   111


Q ss_pred             HHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       603 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                          ..............         .....+.+++.+||+.+|.+||++.|+++.|+.+..
T Consensus       246 ----~~~~~~~~~~~~~~---------~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         246 ----FKLLKEGHRMDKPA---------NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             ----HHHHHcCCCCCCCC---------CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence                11111111111111         112246688999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=3.4e-36  Score=318.67  Aligned_cols=243  Identities=23%  Similarity=0.344  Sum_probs=189.4

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+++.. +++.+|+|++.+.   .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            47999999999999985 4788999998653   233456678888888776 799999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 ~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~~  152 (329)
T cd05618          81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DT  152 (329)
T ss_pred             CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--Cc
Confidence            9999888543   34888999999999999999999988   9999999999999999999999999987532111  12


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC--chhHHHHHHHHhhcCCCcccccccccC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN--KLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......  ................. .+     ..
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~-----p~  226 (329)
T cd05618         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RI-----PR  226 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-CC-----CC
Confidence            234578999999999999999999999999999999999999986422211  11111122222222111 01     01


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCCh
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCM  653 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~  653 (706)
                      ..    ...+.+++.+||+.||.+||+.
T Consensus       227 ~~----~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         227 SL----SVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CC----CHHHHHHHHHHhcCCHHHcCCC
Confidence            11    1245678899999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.7e-36  Score=311.34  Aligned_cols=254  Identities=23%  Similarity=0.358  Sum_probs=199.7

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      ++|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++.+..++..++||||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            5799999999999999999997 457889999987555455667889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++...   ..+++..+..++.|++.||.|||+.+   |+||||+|+||++++++.+||+|||++..+..... 
T Consensus        89 ~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-  161 (267)
T cd06646          89 GGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATIA-  161 (267)
T ss_pred             CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeeccccc-
Confidence            999999998543   34788999999999999999999987   99999999999999999999999999987632211 


Q ss_pred             ccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                       ......++..|+|||.+.   ...++.++||||||+++|||++|+.|+....+.....      .. ....   +..+.
T Consensus       162 -~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~------~~-~~~~---~~~~~  230 (267)
T cd06646         162 -KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF------LM-SKSN---FQPPK  230 (267)
T ss_pred             -ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe------ee-ecCC---CCCCC
Confidence             122346888999999984   3457889999999999999999999974322111100      00 0000   00011


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                      +....  .....+.+++.+||+.+|++||+++++++.|
T Consensus       231 ~~~~~--~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         231 LKDKT--KWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             Ccccc--ccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            11000  1113566889999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=7e-36  Score=307.05  Aligned_cols=256  Identities=27%  Similarity=0.445  Sum_probs=202.0

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-C---cEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-E---QEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|+..+.||+|+||.||+|+... +   ..+++|.+... .....+.+..|+.++++++||||+++++++...+..++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            467888999999999999999753 3   36899998654 344567889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++....  ..+++..+..++.|++.||+|||+.+   ++|+||||+||++++++.+||+|||++.....
T Consensus        85 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  159 (268)
T cd05063          85 TEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLED  159 (268)
T ss_pred             EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence            99999999999986432  45889999999999999999999987   99999999999999999999999999986643


Q ss_pred             CCCccc-ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          542 DETEGN-TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       542 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ...... ......+..|+|||++....++.++||||||+++|||++ |+.|+.....   ......    +.........
T Consensus       160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---~~~~~~----i~~~~~~~~~  232 (268)
T cd05063         160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---HEVMKA----INDGFRLPAP  232 (268)
T ss_pred             ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHH----HhcCCCCCCC
Confidence            221111 111223467999999998899999999999999999997 9999753221   111111    1111110000


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                               ......+.+++.+|++.+|.+||++.+|++.|+.+
T Consensus       233 ---------~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         233 ---------MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             ---------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                     01123567899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.4e-36  Score=321.10  Aligned_cols=237  Identities=24%  Similarity=0.287  Sum_probs=185.3

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHH-HHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEII-LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+|+.. +++.||+|++....   ....+.+..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            47999999999999985 58899999986532   222344555544 56789999999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|..++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||+++.....  ...
T Consensus        81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~  152 (323)
T cd05575          81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--SKT  152 (323)
T ss_pred             CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC--CCc
Confidence            9999988543   34788889999999999999999988   999999999999999999999999998753211  112


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......   .. .... .+     ....
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~~~~~---i~-~~~~-~~-----~~~~  219 (323)
T cd05575         153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---AEMYDN---IL-NKPL-RL-----KPNI  219 (323)
T ss_pred             cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---HHHHHH---HH-cCCC-CC-----CCCC
Confidence            2345789999999999999999999999999999999999999753221   111111   11 1111 01     0111


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChh
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMP  654 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~  654 (706)
                          ...+.+++.+||+.+|.+||++.
T Consensus       220 ----~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         220 ----SVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             ----CHHHHHHHHHHhhcCHHhCCCCC
Confidence                22456788999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=4.8e-37  Score=324.88  Aligned_cols=242  Identities=21%  Similarity=0.260  Sum_probs=191.9

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      +.||+|+||.||+++.. .++.||+|.+...   .......+..|+.++..++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            47999999999999874 5889999998653   2334567788999999999999999999999999999999999999


Q ss_pred             ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          469 SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       469 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      +|..++...   ..+++..+..++.||+.||+|||+ .+   |+||||||+|||+++++.+||+|||+++......  ..
T Consensus        81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~  152 (325)
T cd05594          81 ELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--AT  152 (325)
T ss_pred             cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--cc
Confidence            999888543   358899999999999999999997 56   9999999999999999999999999987532221  11


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....    ...... .+     ....
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~---~~~~~----i~~~~~-~~-----p~~~  219 (325)
T cd05594         153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFEL----ILMEEI-RF-----PRTL  219 (325)
T ss_pred             cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH---HHHHH----HhcCCC-CC-----CCCC
Confidence            22356899999999999999999999999999999999999998543221   11111    111110 00     0111


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHHH
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVILM  659 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~~  659 (706)
                      +    ..+.+++.+||+.||.+|+     +++++++.
T Consensus       220 ~----~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         220 S----PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             C----HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            1    2355788899999999996     89998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=8.5e-36  Score=305.02  Aligned_cols=253  Identities=29%  Similarity=0.451  Sum_probs=200.0

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|.+.++||+|+||.||+|.+..+..+|+|++.... ...+.+.+|+.++++++|||++++++++. ....++||||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence            5688899999999999999998887789999886432 23467889999999999999999999875 456899999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++.... ...+++..+..++.|++.||.|||+.+   ++|+||||+||++++++.++|+|||++......... 
T Consensus        84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-  158 (260)
T cd05069          84 KGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-  158 (260)
T ss_pred             CCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCccc-
Confidence            999999996532 245789999999999999999999887   999999999999999999999999999875332211 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......++..|+|||++.+..++.++||||||+++|||++ |+.|+.....   .......    .........      
T Consensus       159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~----~~~~~~~~~------  225 (260)
T cd05069         159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN---REVLEQV----ERGYRMPCP------  225 (260)
T ss_pred             ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHH----HcCCCCCCC------
Confidence            1122345678999999998899999999999999999999 8888753221   1111111    111111100      


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                         ......+.+++.+||+.+|.+||++++|+++|+.
T Consensus       226 ---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         226 ---QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             ---cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence               0112346678899999999999999999999974

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=4.5e-36  Score=308.69  Aligned_cols=254  Identities=27%  Similarity=0.417  Sum_probs=191.6

Q ss_pred             ceeccCCceeEEEEEeCC---CcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD---EQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      +.||+|+||.||+|...+   +..+|+|++.... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            469999999999998744   4578999886533 334457889999999999999999999999999999999999999


Q ss_pred             Chhhhhhcccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          469 SLDSFIFDQER--CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       469 sL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +|.+++.....  ....++..+..++.|+++||+|||+.+   ++|+||||+||+++.++.+||+|||+++.........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence            99999965432  234677788899999999999999987   9999999999999999999999999997643332222


Q ss_pred             cccccccccCccCccccccC-------CCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          547 NTNRVVGTYGYMAPEYASDG-------QFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~-------~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ......++..|+|||++.+.       .++.++||||||+++|||++ |+.||......+   ......   .. ....+
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~~~~~---~~-~~~~~  230 (269)
T cd05087         158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---VLTYTV---RE-QQLKL  230 (269)
T ss_pred             cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---HHHHHh---hc-ccCCC
Confidence            22334578899999998642       35789999999999999996 999985433211   111111   11 11111


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      .++.+.....    ..+.+++..|+ .+|++|||++||++.|+
T Consensus       231 ~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         231 PKPRLKLPLS----DRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCccCCCCC----hHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            1222111111    13456778898 58999999999999886

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=8.2e-36  Score=304.59  Aligned_cols=246  Identities=30%  Similarity=0.418  Sum_probs=193.8

Q ss_pred             eeccCCceeEEEEEe---CCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          394 KLGEGGFGPVYKGTL---ADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       394 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      +||+|+||.||+|.+   .+++.+|+|++...  .....+++.+|+.++++++||||+++++++. .+..++||||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            689999999999975   34678999998643  2344678899999999999999999999875 55778999999999


Q ss_pred             ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc-c
Q 005236          469 SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-N  547 (706)
Q Consensus       469 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~-~  547 (706)
                      +|.+++...   ..+++..+..++.|++.||+|||+.+   ++||||||.||++++++.+||+|||+++......... .
T Consensus        81 ~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  154 (257)
T cd05116          81 PLNKFLQKN---KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA  154 (257)
T ss_pred             cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence            999998543   34788999999999999999999988   9999999999999999999999999998764332211 1


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                      .....++..|+|||.+....++.++||||||+++|||++ |+.||.....   ......    ...+......     ..
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~----i~~~~~~~~~-----~~  222 (257)
T cd05116         155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG---NEVTQM----IESGERMECP-----QR  222 (257)
T ss_pred             cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH----HHCCCCCCCC-----CC
Confidence            122334678999999988889999999999999999998 9999764322   111111    1111111111     11


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      .    ...+.+++.+||+.+|++||++.+|++.|++
T Consensus       223 ~----~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         223 C----PPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             C----CHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            1    1245689999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=8.3e-37  Score=322.45  Aligned_cols=242  Identities=22%  Similarity=0.325  Sum_probs=191.4

Q ss_pred             ceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      ++||+|+||.||+|+... ++.||||++...   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            469999999999999854 789999998653   233455677888888866 799999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      ++|..++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~  152 (321)
T cd05591          81 GDLMFQIQRS---RKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VT  152 (321)
T ss_pred             CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC--cc
Confidence            9999888543   34788899999999999999999988   9999999999999999999999999987542221  12


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ......   .......   ..    ...
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~---~~~~~~---i~~~~~~---~p----~~~  219 (321)
T cd05591         153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE---DDLFES---ILHDDVL---YP----VWL  219 (321)
T ss_pred             ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH---HHHHHH---HHcCCCC---CC----CCC
Confidence            2335689999999999999999999999999999999999999864322   121111   1111110   00    011


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCC-------ChhHHHHH
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRP-------CMPSVILM  659 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RP-------t~~ev~~~  659 (706)
                      +    ..+.+++..||+.+|.+||       +++++++.
T Consensus       220 ~----~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         220 S----KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             C----HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            1    2456788999999999999       77777654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=7.4e-36  Score=305.43  Aligned_cols=254  Identities=31%  Similarity=0.469  Sum_probs=202.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .++|++.++||+|+||.||+|..++++.||+|.+..... ..+.+.+|+.++++++||||+++++++ ..+..+++|||+
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~   82 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYM   82 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcC
Confidence            367899999999999999999998899999999865332 346788999999999999999999986 456789999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...+++..+..++.|++.||+|||+.+   ++|+||||+||++++++.++|+|||++.........
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05067          83 ENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             CCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence            9999999986543 345788999999999999999999887   999999999999999999999999999876422211


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                       ......++..|+|||++....++.++||||||+++|||++ |+.||.....   .......    .........+    
T Consensus       159 -~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~----~~~~~~~~~~----  226 (260)
T cd05067         159 -AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN---PEVIQNL----ERGYRMPRPD----  226 (260)
T ss_pred             -cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHH----HcCCCCCCCC----
Confidence             1122345678999999998899999999999999999999 9999753221   1111111    1111111111    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                       ..    ...+.+++.+|++.+|++||++++++..|+.
T Consensus       227 -~~----~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         227 -NC----PEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             -CC----CHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence             11    1246789999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=9.1e-37  Score=321.82  Aligned_cols=236  Identities=25%  Similarity=0.322  Sum_probs=187.6

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+|+.+ +++.||||++.+.   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            47999999999999985 4788999998653   233456677888888876 699999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|.+++...   ..+++..+..++.|++.||+|||+.+   ++||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 g~L~~~i~~~---~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~  152 (320)
T cd05590          81 GDLMFHIQKS---RRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KT  152 (320)
T ss_pred             chHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--Cc
Confidence            9999988543   34788999999999999999999988   9999999999999999999999999987532211  12


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......    +...... + .    ...
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~~~~~~----i~~~~~~-~-~----~~~  219 (320)
T cd05590         153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE---DDLFEA----ILNDEVV-Y-P----TWL  219 (320)
T ss_pred             ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---HHHHHH----HhcCCCC-C-C----CCC
Confidence            2335789999999999999999999999999999999999999864322   111111    1111110 0 0    011


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCCh
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCM  653 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~  653 (706)
                          ...+.+++.+||+.||.+||++
T Consensus       220 ----~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         220 ----SQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             ----CHHHHHHHHHHcccCHHHCCCC
Confidence                1245678899999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2.5e-36  Score=318.21  Aligned_cols=242  Identities=26%  Similarity=0.304  Sum_probs=192.0

Q ss_pred             ceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+|.... ++.||||++.+.   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999854 778999998753   233456677888888887 699999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      ++|..++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||+++......  ..
T Consensus        81 ~~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~  152 (318)
T cd05570          81 GDLMFHIQRS---GRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--VT  152 (318)
T ss_pred             CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC--Cc
Confidence            9999888543   34889999999999999999999988   9999999999999999999999999987532111  12


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....|++.|+|||++.+..++.++|||||||++|||++|+.||.....   ......    .......  +.    ...
T Consensus       153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~---~~~~~~----i~~~~~~--~~----~~~  219 (318)
T cd05570         153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE---DELFQS----ILEDEVR--YP----RWL  219 (318)
T ss_pred             ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH---HHHHHH----HHcCCCC--CC----CcC
Confidence            2335689999999999999999999999999999999999999853321   111111    1111110  00    111


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCCh-----hHHHHH
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCM-----PSVILM  659 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~-----~ev~~~  659 (706)
                          ...+.+++.+||+.||.+||++     .++++.
T Consensus       220 ----~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         220 ----SKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             ----CHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence                1245678999999999999999     777653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=7.8e-36  Score=314.12  Aligned_cols=258  Identities=29%  Similarity=0.424  Sum_probs=202.0

Q ss_pred             cCCCccceeccCCceeEEEEEeC--------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA--------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGE  456 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  456 (706)
                      ++|.+.++||+|+||.||+++..        ....+|+|.+... .......+..|+.+++++ +||||+++++++....
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG   91 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence            57889999999999999999752        2456899988653 344567788999999999 6999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQE-------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD  523 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~  523 (706)
                      ..++||||+++|+|.+++....             ....+++..+..++.||+.||.|||+.+   ++||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~  168 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVT  168 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEc
Confidence            9999999999999999996532             1245888999999999999999999987   99999999999999


Q ss_pred             CCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhH
Q 005236          524 QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNL  602 (706)
Q Consensus       524 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~  602 (706)
                      +++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.....   ...
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---~~~  245 (314)
T cd05099         169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV---EEL  245 (314)
T ss_pred             CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH---HHH
Confidence            999999999999987643222222222334568999999999999999999999999999999 8888643221   111


Q ss_pred             HHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       603 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...    ...........         .....+.+++.+||+.+|.+||++.|+++.|...
T Consensus       246 ~~~----~~~~~~~~~~~---------~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~  293 (314)
T cd05099         246 FKL----LREGHRMDKPS---------NCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV  293 (314)
T ss_pred             HHH----HHcCCCCCCCC---------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            111    11111111111         1122456789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.1e-36  Score=303.98  Aligned_cols=251  Identities=29%  Similarity=0.459  Sum_probs=203.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .++|++.+.||+|+||.||+|... ++.||+|.+..... ..+++.+|+.++++++|+||+++++++......++||||+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            357889999999999999999875 78899999976544 5678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++..... ..+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++....... 
T Consensus        83 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-  157 (256)
T cd05039          83 AKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-  157 (256)
T ss_pred             CCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence            99999999965432 35899999999999999999999988   99999999999999999999999999987532211 


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                          ....+..|+|||++....++.++||||||+++|||++ |+.|+.....   .......    .........+    
T Consensus       158 ----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~----~~~~~~~~~~----  222 (256)
T cd05039         158 ----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPHV----EKGYRMEAPE----  222 (256)
T ss_pred             ----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHH----hcCCCCCCcc----
Confidence                2334668999999998899999999999999999997 9888753321   1111111    1111111111    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       .    ....+.+++.+||+.+|.+||+++||+++|+++
T Consensus       223 -~----~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         223 -G----CPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             -C----CCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence             1    123566889999999999999999999999753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=3.8e-36  Score=320.25  Aligned_cols=259  Identities=30%  Similarity=0.431  Sum_probs=199.7

Q ss_pred             cCCCccceeccCCceeEEEEEe------CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeC-Ce
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHG-EE  457 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~  457 (706)
                      ++|++.+.||+|+||.||+|+.      ..++.||||++... .......+.+|+.++.++ +||||+++++++... ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            6799999999999999999974      34678999998653 233456788999999999 689999999988654 46


Q ss_pred             eEEEEecCCCCChhhhhhcccc----------------------------------------------------------
Q 005236          458 KLLIYEFMPNKSLDSFIFDQER----------------------------------------------------------  479 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------------  479 (706)
                      .++||||+++|+|.+++.....                                                          
T Consensus        87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  166 (343)
T ss_pred             eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence            7899999999999999864210                                                          


Q ss_pred             ------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccccccccc
Q 005236          480 ------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG  553 (706)
Q Consensus       480 ------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g  553 (706)
                            ...+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++...............+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  243 (343)
T cd05103         167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL  243 (343)
T ss_pred             hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence                  123678888999999999999999987   99999999999999999999999999987533322222222345


Q ss_pred             ccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHH
Q 005236          554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEV  632 (706)
Q Consensus       554 t~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  632 (706)
                      +..|+|||.+.+..++.++||||||+++|||++ |..|+......  ....    .....+......     ...+    
T Consensus       244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~----~~~~~~~~~~~~-----~~~~----  308 (343)
T cd05103         244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFC----RRLKEGTRMRAP-----DYTT----  308 (343)
T ss_pred             CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HHHH----HHHhccCCCCCC-----CCCC----
Confidence            678999999999999999999999999999997 88887543221  1111    111111111110     0111    


Q ss_pred             HHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          633 IRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       633 ~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..+.+++..||+.+|.+||++.||++.|+.+
T Consensus       309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~  339 (343)
T cd05103         309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  339 (343)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            2466888999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.1e-37  Score=325.32  Aligned_cols=238  Identities=24%  Similarity=0.295  Sum_probs=189.8

Q ss_pred             ceeccCCceeEEEEEe----CCCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          393 KKLGEGGFGPVYKGTL----ADEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      +.||+|+||.||+++.    ..++.+|+|++....  ......+..|+.++++++||||+++++++.+.+..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            6899999999999875    357899999986532  2234567789999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++......  .
T Consensus        82 ~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~  153 (318)
T cd05582          82 GGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--K  153 (318)
T ss_pred             CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--C
Confidence            99999998543   34889999999999999999999988   9999999999999999999999999998653221  1


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                      ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....   ......   .... .. .+     ...
T Consensus       154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~---~~~~~~---i~~~-~~-~~-----p~~  220 (318)
T cd05582         154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR---KETMTM---ILKA-KL-GM-----PQF  220 (318)
T ss_pred             ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH---HHHHHH---HHcC-CC-CC-----CCC
Confidence            22335789999999999998999999999999999999999999754221   111111   1111 11 00     001


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhH
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPS  655 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~e  655 (706)
                      .+    ..+.+++.+||+.||++||++.+
T Consensus       221 ~~----~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         221 LS----PEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CC----HHHHHHHHHHhhcCHhHcCCCCC
Confidence            11    23557888999999999999666

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3e-36  Score=317.27  Aligned_cols=240  Identities=26%  Similarity=0.328  Sum_probs=188.3

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      ++||+|+||.||+|+.. .++.||+|.++...   ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            47999999999999985 47899999986532   23345667788777654 899999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....  ...
T Consensus        81 g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~  152 (316)
T cd05620          81 GDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DNR  152 (316)
T ss_pred             CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccC--CCc
Confidence            9999988543   34788899999999999999999988   999999999999999999999999998753211  112


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   .......    ..... .+     ....
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~---~~~~~~~----~~~~~-~~-----~~~~  219 (316)
T cd05620         153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE---DELFESI----RVDTP-HY-----PRWI  219 (316)
T ss_pred             eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHH----HhCCC-CC-----CCCC
Confidence            2345789999999999999999999999999999999999999853321   1111111    11110 00     0111


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChh-HHH
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMP-SVI  657 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~-ev~  657 (706)
                      +    ..+.+++.+||+.||.+||++. ++.
T Consensus       220 ~----~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         220 T----KESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             C----HHHHHHHHHHccCCHHHcCCChHHHH
Confidence            1    2455788899999999999985 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=4.7e-36  Score=306.27  Aligned_cols=249  Identities=29%  Similarity=0.416  Sum_probs=198.6

Q ss_pred             ceeccCCceeEEEEEeCC--C--cEEEEEEcCccch-hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD--E--QEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      ++||+|++|.||+|.+.+  +  ..||||.+..... ...+.+.+|+.++++++||||+++++.+.. ...++||||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            478999999999998743  2  3689999977555 667789999999999999999999999988 889999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc-c
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE-G  546 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~-~  546 (706)
                      ++|.+++.+... ..+++..++.++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+...... .
T Consensus        80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  155 (257)
T cd05040          80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV  155 (257)
T ss_pred             CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEecccccccccccccccee
Confidence            999999976443 56899999999999999999999987   999999999999999999999999999876442211 1


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......++..|+|||++....++.++||||||+++|||++ |+.|+.....   .+.......   ........     .
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~---~~~~~~~~-----~  224 (257)
T cd05040         156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG---SQILKKIDK---EGERLERP-----E  224 (257)
T ss_pred             cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHh---cCCcCCCC-----c
Confidence            2223457789999999999999999999999999999999 9999743222   111111111   11100000     0


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                          .....+.+++.+|++.+|.+||++.+|++.|.
T Consensus       225 ----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         225 ----ACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             ----cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence                11235667999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-38  Score=293.76  Aligned_cols=251  Identities=24%  Similarity=0.352  Sum_probs=197.9

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcC--ccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLS--KISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ..++|++.++||+|.|+.||+... ..|+.+|+|.+.  +....+.+.+.+|+.+-+.|+|||||+|.....+....++|
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence            346889999999999999999876 458888888764  23445788999999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC---CCeEEeeeccccc
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLARA  538 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~---~~~kl~Dfgla~~  538 (706)
                      +|+|.|++|..=|...   ...++..+-+.+.||+++|.|.|..+   |||||+||.|+++...   --+||+|||+|..
T Consensus        89 Fe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   89 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIE  162 (355)
T ss_pred             EecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEE
Confidence            9999999997666433   34677888899999999999999998   9999999999999543   4589999999998


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ++..   ......+|||+|||||++...+|+..+|||+.|||||-|+.|.+||...+..   .+.+...... .......
T Consensus       163 l~~g---~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~---rlye~I~~g~-yd~~~~~  235 (355)
T KOG0033|consen  163 VNDG---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYEQIKAGA-YDYPSPE  235 (355)
T ss_pred             eCCc---cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH---HHHHHHhccc-cCCCCcc
Confidence            8622   2233468999999999999999999999999999999999999997542221   2221111110 0011111


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                      .+     ..    ...+.+|+.+||..||.+|.|+.|.+
T Consensus       236 w~-----~i----s~~Ak~LvrrML~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  236 WD-----TV----TPEAKSLIRRMLTVNPKKRITADEAL  265 (355)
T ss_pred             cC-----cC----CHHHHHHHHHHhccChhhhccHHHHh
Confidence            11     11    12455788999999999999998876

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.7e-37  Score=307.54  Aligned_cols=261  Identities=25%  Similarity=0.310  Sum_probs=194.3

Q ss_pred             CCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-----eeEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-----EKLLI  461 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lV  461 (706)
                      .|...+++|.|+||.||+|.+.. ++.||||+.-...+    --..|+.+|++++|||||+|.-+|....     ...+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            46667999999999999999854 68999999754322    2346899999999999999998887533     23589


Q ss_pred             EecCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-CCeEEeeecccccc
Q 005236          462 YEFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAF  539 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~Dfgla~~~  539 (706)
                      ||||+. +|...++.. .....++...+.-+..||.+||.|||+.+   |+||||||+|+|||.+ |.+||+|||.|+.+
T Consensus       101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            999976 888888642 12234666667778999999999999987   9999999999999977 99999999999987


Q ss_pred             CCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc------
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE------  612 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~------  612 (706)
                      ...+..   ....-|..|.|||.+.+ ..|+.+.||||.|||+.||+-|++-|...+..+.+.++.........      
T Consensus       177 ~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m  253 (364)
T KOG0658|consen  177 VKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM  253 (364)
T ss_pred             ccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence            544332   33567889999999977 58999999999999999999999998765554444444443221111      


Q ss_pred             --C----CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          613 --G----MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       613 --~----~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        .    ..+.+...-+..........+.++++.++|+++|.+|.++.|++..
T Consensus       254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence              0    0111111111111112223356789999999999999999998753

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=6.3e-36  Score=307.61  Aligned_cols=256  Identities=26%  Similarity=0.403  Sum_probs=200.8

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-C---cEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-E---QEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ..|++.+.||+|+||.||+|.+.. +   ..||||.+... .....+.|..|+.++++++||||+++++++.++...++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            357888999999999999999753 3   36999998654 455567899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++....  ..+++..++.++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++....
T Consensus        84 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          84 TEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             EecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccccc
Confidence            99999999999986532  45789999999999999999999987   99999999999999999999999999886543


Q ss_pred             CCCcccccccc---cccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          542 DETEGNTNRVV---GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       542 ~~~~~~~~~~~---gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ...........   .+..|+|||++....++.++||||||+++|||++ |..||.....   .........   ......
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~---~~~~~~i~~---~~~~~~  232 (269)
T cd05065         159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVINAIEQ---DYRLPP  232 (269)
T ss_pred             CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH---HHHHHHHHc---CCcCCC
Confidence            22211111111   2457999999999999999999999999999886 9988753221   111111111   100000


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       .     ..    ....+.+++..||+.+|.+||++.+|+.+|+..
T Consensus       233 -~-----~~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         233 -P-----MD----CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             -c-----cc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             0     01    122456789999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.1e-36  Score=304.87  Aligned_cols=255  Identities=31%  Similarity=0.486  Sum_probs=204.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .++|++.++||+|+||.||+|..++++.+|||.+.... ...+.+.+|+.++++++||||+++++++......++||||+
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            46899999999999999999999888899999986533 33567899999999999999999999999888999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...+++..+..++.|++.||.|||+.+   ++|+||||+||++++++.+||+|||+++.+......
T Consensus        84 ~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          84 SKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             CCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence            9999999996543 245889999999999999999999987   999999999999999999999999999876432111


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                       ......++..|+|||.+.+..++.++||||||+++|||++ |+.||....   .................    .    
T Consensus       160 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~---~~~~~~~~~~~~~~~~~----~----  227 (261)
T cd05034         160 -AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT---NREVLEQVERGYRMPRP----P----  227 (261)
T ss_pred             -hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHcCCCCCCC----C----
Confidence             1112234568999999999899999999999999999999 898874322   11122211111100000    0    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                       ..    ...+.+++.+|++.+|.+||+++++.+.|+.
T Consensus       228 -~~----~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         228 -NC----PEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             -CC----CHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence             01    2346678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.1e-36  Score=324.92  Aligned_cols=262  Identities=19%  Similarity=0.252  Sum_probs=199.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeC---CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA---DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ..+|.+.+.||+|+||.||++...   .++.|++|.+...     +...+|+.++++++||||+++++++......++||
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            357999999999999999999763   3567999987542     23467999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      |++. ++|.+++..   ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+...
T Consensus       166 e~~~-~~l~~~l~~---~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~  238 (392)
T PHA03207        166 PKYK-CDLFTYVDR---SGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAH  238 (392)
T ss_pred             hhcC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence            9996 688888832   345899999999999999999999988   999999999999999999999999999876443


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc--c---
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS--Q---  617 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~---  617 (706)
                      ..........||+.|+|||++....++.++|||||||++|||++|+.||...........+....+........  .   
T Consensus       239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~  318 (392)
T PHA03207        239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS  318 (392)
T ss_pred             cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence            33333334679999999999999999999999999999999999999986544332222222222211110000  0   


Q ss_pred             --c------ccccccCcCCHH-------HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          618 --L------IDACFKDSFNLA-------EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       618 --~------~d~~~~~~~~~~-------~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        +      ............       ....+.+++.+||+.+|++|||+.|++..
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence              0      000000000000       01245678899999999999999999876

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=4.4e-36  Score=317.58  Aligned_cols=244  Identities=23%  Similarity=0.350  Sum_probs=192.0

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+++.. +++.+|+|++...   .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            47999999999999985 4788999998753   233456788999999888 699999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....  ...
T Consensus        81 ~~L~~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~  152 (327)
T cd05617          81 GDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--GDT  152 (327)
T ss_pred             CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCC--CCc
Confidence            9999888543   34889999999999999999999988   999999999999999999999999998753211  112


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||................+........ + .    ...
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~-p----~~~  226 (327)
T cd05617         153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIR-I-P----RFL  226 (327)
T ss_pred             eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCC-C-C----CCC
Confidence            234578999999999999999999999999999999999999986543332222222222222221111 1 0    011


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChh
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMP  654 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~  654 (706)
                      +    ..+.+++.+||+.||.+||+++
T Consensus       227 ~----~~~~~li~~~L~~dP~~R~~~~  249 (327)
T cd05617         227 S----VKASHVLKGFLNKDPKERLGCQ  249 (327)
T ss_pred             C----HHHHHHHHHHhccCHHHcCCCC
Confidence            1    2356788999999999999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=3.2e-36  Score=324.72  Aligned_cols=262  Identities=23%  Similarity=0.336  Sum_probs=196.5

Q ss_pred             CCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-----eeE
Q 005236          388 NFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-----EKL  459 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~  459 (706)
                      +|++.++||+|+||.||++.. .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            478889999999999999997 46889999998653  3334567889999999999999999999998776     789


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +||||+. ++|.+++...   ..+++..+..++.||+.||+|||+.+   ++||||||+|||++.++.+||+|||+++..
T Consensus        81 lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             EEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence            9999997 5787777433   35889999999999999999999988   999999999999999999999999999865


Q ss_pred             CCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHH------------
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA------------  606 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~------------  606 (706)
                      ...... ......+++.|+|||++.+. .++.++|||||||++|||++|+.||...........+...            
T Consensus       154 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~  232 (372)
T cd07853         154 EPDESK-HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA  232 (372)
T ss_pred             ccCccc-cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence            332221 12234678999999998774 5799999999999999999999998654322211111110            


Q ss_pred             ----HHHh-hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          607 ----WKLW-NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       607 ----~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          ...+ ..............  ........+.+++.+||+.||.+|||++|+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         233 CEGARAHILRGPHKPPSLPVLYT--LSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             hHHHHHHHHhCCCCCCchHHhcc--cCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                0000 00000000000000  000112356789999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=9.6e-36  Score=305.90  Aligned_cols=256  Identities=27%  Similarity=0.430  Sum_probs=201.7

Q ss_pred             cCCCccceeccCCceeEEEEEeCC----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.+.||+|+||.||+|.+..    +..+|+|.+... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            578889999999999999998742    336899988653 234457889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++....  ..+++.+++.++.|++.||+|||+.+   ++||||||+|||++.++.++|+|||+++.+..
T Consensus        84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          84 TEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence            99999999999996543  35788999999999999999999988   99999999999999999999999999987643


Q ss_pred             CCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          542 DETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       542 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ..... ......++..|+|||++.+..++.++||||||+++||+++ |+.||......   .......    ....... 
T Consensus       159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~---~~~~~~~----~~~~~~~-  230 (267)
T cd05066         159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ---DVIKAIE----EGYRLPA-  230 (267)
T ss_pred             ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH---HHHHHHh----CCCcCCC-
Confidence            32211 1112233568999999998899999999999999999887 99997543221   1111111    1110000 


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                         . .    .....+.+++.+|++.+|.+||+|.++++.|+..
T Consensus       231 ---~-~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         231 ---P-M----DCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             ---C-C----CCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence               0 0    0122456789999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.4e-36  Score=326.68  Aligned_cols=195  Identities=24%  Similarity=0.327  Sum_probs=168.1

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ...+|.+.+.||+|+||.||++.... ++.||||...      ...+.+|+.++++++|||||++++++..+...++|||
T Consensus       167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e  240 (461)
T PHA03211        167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP  240 (461)
T ss_pred             ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence            34689999999999999999999854 7889999642      2345789999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      ++. ++|..++....  ..+++..++.++.||++||.|||+.+   |+||||||+||||+.++.+||+|||+++.+....
T Consensus       241 ~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~  314 (461)
T PHA03211        241 KYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSW  314 (461)
T ss_pred             ccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence            995 68888875432  35899999999999999999999988   9999999999999999999999999998764332


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCC
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNR  591 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~  591 (706)
                      .........||..|+|||++.+..++.++|||||||+||||++|..++
T Consensus       315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence            222223457999999999999999999999999999999999988764

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-35  Score=303.97  Aligned_cols=250  Identities=34%  Similarity=0.499  Sum_probs=201.8

Q ss_pred             ceeccCCceeEEEEEeCC----CcEEEEEEcCccchh-hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD----EQEIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+|....    +..+++|.+...... ..+.+.+|+.+++.++|+||+++++++......++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            479999999999999854    778999998764333 367899999999999999999999999999999999999999


Q ss_pred             CChhhhhhcccc------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          468 KSLDSFIFDQER------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       468 gsL~~~l~~~~~------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      ++|.+++.....      ...+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.+||+|||.+.....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence            999999976421      356899999999999999999999987   99999999999999999999999999988654


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ...........++..|+|||.+....++.++||||||+++|||++ |..|+.....   ......    ...........
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~----~~~~~~~~~~~  230 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---EEVLEY----LRKGYRLPKPE  230 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH---HHHHHH----HHcCCCCCCCc
Confidence            332223334567889999999988899999999999999999999 5888765421   111111    11111111100


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                           ..    ...+.+++.+||+.+|.+|||+.|++..|+
T Consensus       231 -----~~----~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         231 -----YC----PDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             -----cC----ChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence                 11    235667889999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.8e-36  Score=325.66  Aligned_cols=259  Identities=19%  Similarity=0.224  Sum_probs=197.5

Q ss_pred             HHHHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC
Q 005236          381 TIANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE  456 (706)
Q Consensus       381 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  456 (706)
                      .+....++|++.+.||+|+||.||+++.. .++.+|+|.+.+.   .....+.+.+|+.+++.++||||+++++.+.++.
T Consensus        37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (371)
T cd05622          37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  116 (371)
T ss_pred             hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            33445589999999999999999999985 4778999998642   2233456788999999999999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      ..++||||+++|+|.+++...    .++...+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a  189 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTC  189 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCce
Confidence            999999999999999998542    3678888899999999999999988   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCccccccC----CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASDG----QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE  612 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~  612 (706)
                      +.+..... .......||+.|+|||++...    .++.++|||||||++|||++|+.||.....   ....   ......
T Consensus       190 ~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---~~~~---~~i~~~  262 (371)
T cd05622         190 MKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL---VGTY---SKIMNH  262 (371)
T ss_pred             eEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH---HHHH---HHHHcC
Confidence            87643221 122346799999999998754    378999999999999999999999854221   1111   111111


Q ss_pred             CCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCC--CCChhHHHHHh
Q 005236          613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPED--RPCMPSVILML  660 (706)
Q Consensus       613 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--RPt~~ev~~~L  660 (706)
                      .....+.+     ..  .....+.+++..||+..+.+  ||+++|+++..
T Consensus       263 ~~~~~~~~-----~~--~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         263 KNSLTFPD-----DN--DISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             CCcccCCC-----cC--CCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            11111111     00  11123556888999844433  77888888754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.8e-35  Score=300.71  Aligned_cols=247  Identities=28%  Similarity=0.401  Sum_probs=196.5

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCChh
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLD  471 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~  471 (706)
                      ++||+|+||.||+|...+++.+|+|.+.... ......+.+|+.++++++||||+++++++......++||||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            4799999999999998888999999987643 333457889999999999999999999999999999999999999999


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccccccc
Q 005236          472 SFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV  551 (706)
Q Consensus       472 ~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~  551 (706)
                      +++....  ..+++..+..++.|++.+|.|||+.+   ++|+||||+||++++++.+||+|||++......... .....
T Consensus        81 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~  154 (250)
T cd05085          81 SFLRKKK--DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSGLK  154 (250)
T ss_pred             HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccc-cCCCC
Confidence            9985432  35789999999999999999999987   999999999999999999999999998754322111 11122


Q ss_pred             ccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHH
Q 005236          552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLA  630 (706)
Q Consensus       552 ~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  630 (706)
                      .++..|+|||++....++.++||||||+++|||++ |..||.....   ......    ...........         .
T Consensus       155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~---~~~~~~----~~~~~~~~~~~---------~  218 (250)
T cd05085         155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN---QQAREQ----VEKGYRMSCPQ---------K  218 (250)
T ss_pred             CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH---HHHHHH----HHcCCCCCCCC---------C
Confidence            34678999999998899999999999999999998 8888753221   111111    11111111111         1


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          631 EVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       631 ~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ....+.+++.+|++.+|++||++.|+++.|.
T Consensus       219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         219 CPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            1235678999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=2.5e-36  Score=317.19  Aligned_cols=262  Identities=23%  Similarity=0.327  Sum_probs=196.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|.+.++||+|+||.||+|+.. .++.||+|++.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            57999999999999999999985 57789999986432 22334677899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++ +|.+++....  ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.......
T Consensus        86 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  159 (309)
T cd07872          86 LDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTK  159 (309)
T ss_pred             CCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence            985 7888775432  34788889999999999999999988   99999999999999999999999999976432211


Q ss_pred             cccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc-----
Q 005236          545 EGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL-----  618 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  618 (706)
                        ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+....+............+.+     
T Consensus       160 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (309)
T cd07872         160 --TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE  237 (309)
T ss_pred             --ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence              1223467899999999865 46899999999999999999999998654332222222111100000000000     


Q ss_pred             -cc---------ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          619 -ID---------ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       619 -~d---------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       .+         +.......  ....+.+++.+||+.||.+|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         238 FKNYNFPKYKPQPLINHAPR--LDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hhhhhcCccCCCchhhhccC--CCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence             00         00000000  1124568999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=9.3e-36  Score=312.61  Aligned_cols=265  Identities=22%  Similarity=0.272  Sum_probs=198.8

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.++||+|+||.||++... ++..+|+|.+... .....+.+.+|++++.+++||||+++++++.+++..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            46899999999999999999975 4777888887643 344456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++...   ..+++..+..++.|+++||.|||+..  +++|+||||+|||+++++.+||+|||++......  
T Consensus        81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--  153 (308)
T cd06615          81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  153 (308)
T ss_pred             cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence            9999999999643   45788899999999999999999742  3999999999999999999999999998764321  


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC---------
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP---------  615 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------  615 (706)
                        ......++..|+|||.+.+..++.++||||||+++|||++|+.|+........................         
T Consensus       154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (308)
T cd06615         154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP  231 (308)
T ss_pred             --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence              122356889999999998888999999999999999999999997532211100000000000000000         


Q ss_pred             --------cccccccccC---c-CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          616 --------SQLIDACFKD---S-FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       616 --------~~~~d~~~~~---~-~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                              .++.+.....   . ........+.+++.+||+.+|.+||++++|++..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~  288 (308)
T cd06615         232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP  288 (308)
T ss_pred             CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence                    0000000000   0 0000122467899999999999999999998763

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-37  Score=329.27  Aligned_cols=252  Identities=28%  Similarity=0.430  Sum_probs=209.0

Q ss_pred             CCccceeccCCceeEEEEEe-CCC----cEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          389 FSINKKLGEGGFGPVYKGTL-ADE----QEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~-~~~----~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .+..++||+|+||+||||.+ ..+    .+||+|++.. ...+..+++.+|+.+|.+++||||+||+++|.... ..||+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            44558999999999999987 333    4689998865 45566789999999999999999999999998766 88999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      +||+.|+|.+|++.+.  ..+-.+..+.|..|||+||.|||++.   ++||||..+||||.+-.++||.|||+++.+..+
T Consensus       777 q~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d  851 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD  851 (1177)
T ss_pred             HhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence            9999999999997643  55788899999999999999999887   999999999999999999999999999999877


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ..........-.+.|||-|.+....|+.++|||||||++||++| |..|+.....++..++++...+         +   
T Consensus       852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR---------L---  919 (1177)
T KOG1025|consen  852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER---------L---  919 (1177)
T ss_pred             cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc---------C---
Confidence            76666666667889999999999999999999999999999999 8888765544433333222111         1   


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                          +...-..+.+..++.+||..|+..||+++++...+.+
T Consensus       920 ----sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~  956 (1177)
T KOG1025|consen  920 ----SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR  956 (1177)
T ss_pred             ----CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence                1122344567789999999999999999999876643

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=2.3e-36  Score=308.86  Aligned_cols=252  Identities=32%  Similarity=0.498  Sum_probs=198.9

Q ss_pred             CCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhH--HHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          389 FSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGL--KELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      |++.+.||+|+||+||+++... ++.+|+|.+........  .....|+.++++++||||+++++++.+....++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            5678999999999999999865 56899999976544332  23456999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.   ....+++..+..++.||++||.+||+.+   ++|+||||+||++++++.++|+|||.+....  ...
T Consensus        81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~  152 (260)
T PF00069_consen   81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENN  152 (260)
T ss_dssp             TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEEST--STT
T ss_pred             cccccccccc---cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc--ccc
Confidence            9999999996   2345789999999999999999999988   9999999999999999999999999998641  122


Q ss_pred             ccccccccccCccCccccc-cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYAS-DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~-~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                      .......++..|+|||++. ...++.++||||+|+++|+|++|..|+......+..........   .......    ..
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~----~~  225 (260)
T PF00069_consen  153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILK---RPLPSSS----QQ  225 (260)
T ss_dssp             SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHH---THHHHHT----TS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccc---ccccccc----cc
Confidence            2334467899999999998 88999999999999999999999999764411122222211111   0000000    00


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ...   ....+.+++..||+.+|++||++.++++
T Consensus       226 ~~~---~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  226 SRE---KSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HTT---SHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             cch---hHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            000   0146678999999999999999999985

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.9e-36  Score=320.24  Aligned_cols=240  Identities=23%  Similarity=0.264  Sum_probs=186.9

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHH-HHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEII-LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+++.. +++.+|+|++...   .......+..|.. +++.++||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46999999999999874 5889999998653   2233445555654 56779999999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.....  ...
T Consensus        81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~  152 (325)
T cd05604          81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SDT  152 (325)
T ss_pred             CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CCC
Confidence            9999888543   35788999999999999999999988   999999999999999999999999998753211  112


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......   .. .... . +.    ...
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~~~~---~~-~~~~-~-~~----~~~  219 (325)
T cd05604         153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV---AEMYDN---IL-HKPL-V-LR----PGA  219 (325)
T ss_pred             cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH---HHHHHH---HH-cCCc-c-CC----CCC
Confidence            2345789999999999999999999999999999999999999754221   111111   11 1111 0 00    111


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                          ...+.+++..||+.+|.+||++.+.+
T Consensus       220 ----~~~~~~ll~~ll~~~p~~R~~~~~~~  245 (325)
T cd05604         220 ----SLTAWSILEELLEKDRQRRLGAKEDF  245 (325)
T ss_pred             ----CHHHHHHHHHHhccCHHhcCCCCCCH
Confidence                12455788899999999999986433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.3e-35  Score=307.91  Aligned_cols=263  Identities=25%  Similarity=0.381  Sum_probs=201.5

Q ss_pred             cCCCccceeccCCceeEEEEEe-----CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--Cee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEK  458 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  458 (706)
                      ..|++.+.||+|+||.||+++.     ..+..||+|.+... .....+.+.+|+.++++++||||+++++++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            3578889999999999999974     34778999998654 344457899999999999999999999998875  567


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++++|.+++....  ..+++..++.++.||+.||+|||+.+   ++||||||+||++++++.+||+|||+++.
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             EEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence            89999999999999985432  35799999999999999999999988   99999999999999999999999999987


Q ss_pred             cCCCCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCC--------CCchhHHHHHHHH
Q 005236          539 FGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS--------DNKLNLIRHAWKL  609 (706)
Q Consensus       539 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~--------~~~~~~~~~~~~~  609 (706)
                      +...... .......++..|+|||++.+..++.++||||||+++|||++++.|......        .............
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05079         159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV  238 (284)
T ss_pred             cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence            6433221 112234567789999999988999999999999999999998766321100        0000011111111


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...+......+     .    ....+.+++.+||+.+|.+||+++++++.|+.+
T Consensus       239 ~~~~~~~~~~~-----~----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         239 LEEGKRLPRPP-----N----CPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHcCccCCCCC-----C----CCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            11111111110     1    123577899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=2.6e-36  Score=331.07  Aligned_cols=260  Identities=19%  Similarity=0.287  Sum_probs=190.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--------C
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--------E  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~  456 (706)
                      ..+|++.++||+|+||.||+|+.. .++.||||++....    ....+|+.+++.++||||+++++++...        .
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            467999999999999999999985 57899999885422    2345799999999999999999887532        2


Q ss_pred             eeEEEEecCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-CeEEeeec
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFG  534 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfg  534 (706)
                      ..++||||+++ +|.+++... .....+++..+..++.||+.||+|||+.+   |+||||||+||||+.++ .+||+|||
T Consensus       141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG  216 (440)
T PTZ00036        141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG  216 (440)
T ss_pred             EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence            45689999985 677666432 23356889999999999999999999988   99999999999999665 79999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      +++.+....   ......||+.|+|||++.+. .++.++|||||||++|||++|.+||......   ..+....+.....
T Consensus       217 la~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~---~~~~~i~~~~~~p  290 (440)
T PTZ00036        217 SAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV---DQLVRIIQVLGTP  290 (440)
T ss_pred             cchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCC
Confidence            998764322   12235689999999998764 6899999999999999999999998543321   2222221111111


Q ss_pred             CC---------------cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 MP---------------SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 ~~---------------~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..               ..+....+...+.......+.+++.+||+.+|.+|||+.|+++.
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence            00               00000000000000112356789999999999999999999843

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.3e-35  Score=307.98  Aligned_cols=250  Identities=26%  Similarity=0.355  Sum_probs=196.3

Q ss_pred             CCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          389 FSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      |++.+.||+|+||.||++... .++.||+|.+....   ....+.+.+|+.++++++|+||+++++.+.+.+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            677799999999999999985 57899999886432   22345677899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++.... ...+++..+..++.|++.||.|||+.+   |+||||||+||++++++.++|+|||++........
T Consensus        82 ~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  157 (285)
T cd05630          82 MNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT  157 (285)
T ss_pred             cCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence            99999999886433 234888999999999999999999887   99999999999999999999999999876532221


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                         .....|+..|+|||++.+..++.++||||||+++|||++|+.||.....................    ..     .
T Consensus       158 ---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~----~~-----~  225 (285)
T cd05630         158 ---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQE----EY-----S  225 (285)
T ss_pred             ---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhh----hc-----C
Confidence               12246899999999999999999999999999999999999998643222111111111111110    00     0


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVIL  658 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~  658 (706)
                      ....    ..+.+++..||+.+|++|||     ++|+++
T Consensus       226 ~~~~----~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         226 EKFS----PDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             ccCC----HHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            1111    23567888999999999999     777775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=7.1e-36  Score=339.68  Aligned_cols=260  Identities=20%  Similarity=0.266  Sum_probs=200.2

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||.||+|+.. .++.||||++...   .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            57999999999999999999985 4889999998652   2334567899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhccc--------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          463 EFMPNKSLDSFIFDQE--------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                      ||+++++|.+++....        .....++..++.++.||++||+|||+.+   |+||||||+|||++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence            9999999999986421        1223567788899999999999999987   9999999999999999999999999


Q ss_pred             cccccCCCCC----------------cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 005236          535 LARAFGGDET----------------EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN  598 (706)
Q Consensus       535 la~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~  598 (706)
                      +++.......                ........||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            9987621110                001123469999999999999999999999999999999999999985422111


Q ss_pred             chhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCC-ChhHHHHHhcCC
Q 005236          599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-CMPSVILMLGSE  663 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-t~~ev~~~L~~~  663 (706)
                          +... ....  .+.... +  ...    ....+.+++.+||+.+|.+|| +++++++.|+..
T Consensus       239 ----i~~~-~~i~--~P~~~~-p--~~~----iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        239 ----ISYR-DVIL--SPIEVA-P--YRE----IPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             ----hhhh-hhcc--Chhhcc-c--ccc----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                1000 0000  000000 0  001    112356788999999999995 667777776644

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=7.2e-36  Score=312.69  Aligned_cols=255  Identities=28%  Similarity=0.442  Sum_probs=199.1

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-Cc--EEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQ--EIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.+.||+|+||.||+|.+.. +.  .+++|.+... .......+.+|+.++.++ +||||+++++++.+++..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            578899999999999999999743 43  4678877543 344567889999999999 899999999999999999999


Q ss_pred             EecCCCCChhhhhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          462 YEFMPNKSLDSFIFDQE-------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      |||+++++|.+++....             ....+++..++.++.||++||+|||+.+   ++||||||+|||+++++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence            99999999999996542             1235789999999999999999999887   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+|||+++....   ........++..|+|||++.+..++.++||||||+++|||+| |..||......   .....  
T Consensus       164 kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~--  235 (303)
T cd05088         164 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEK--  235 (303)
T ss_pred             EeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH---HHHHH--
Confidence            9999999864211   111112234678999999988889999999999999999998 99987532221   11111  


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                        ..........     ...    ...+.+++.+||+.+|.+||+++++++.|+..
T Consensus       236 --~~~~~~~~~~-----~~~----~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~  280 (303)
T cd05088         236 --LPQGYRLEKP-----LNC----DDEVYDLMRQCWREKPYERPSFAQILVSLNRM  280 (303)
T ss_pred             --HhcCCcCCCC-----CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence              1111110000     011    12456799999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2e-36  Score=324.70  Aligned_cols=202  Identities=26%  Similarity=0.360  Sum_probs=174.0

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||+++.. .++.||||++...   .....+.+.+|+.++..++||||+++++.+.+.+..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46889999999999999999985 4889999998643   2334567888999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+...
T Consensus        81 E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~  154 (360)
T cd05627          81 EFLPGGDMMTLLMKK---DTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA  154 (360)
T ss_pred             eCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence            999999999998643   34788899999999999999999988   999999999999999999999999998754321


Q ss_pred             CCc---------------------------------ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCC
Q 005236          543 ETE---------------------------------GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKK  589 (706)
Q Consensus       543 ~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~  589 (706)
                      ...                                 .......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~  234 (360)
T cd05627         155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP  234 (360)
T ss_pred             cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence            100                                 00113469999999999999999999999999999999999999


Q ss_pred             CCCCC
Q 005236          590 NRGFY  594 (706)
Q Consensus       590 p~~~~  594 (706)
                      ||...
T Consensus       235 Pf~~~  239 (360)
T cd05627         235 PFCSE  239 (360)
T ss_pred             CCCCC
Confidence            98643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.4e-35  Score=307.61  Aligned_cols=246  Identities=25%  Similarity=0.339  Sum_probs=193.3

Q ss_pred             CCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          389 FSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      |+..+.||+|+||+||+|... +++.+|+|.+....   ......+.+|+.++++++|+||+++.+++..++..++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            667789999999999999884 58899999986532   22345678899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++.... ...+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++....... 
T Consensus        82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-  156 (285)
T cd05632          82 MNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-  156 (285)
T ss_pred             ccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence            99999998886543 235899999999999999999999987   9999999999999999999999999997643221 


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        ......|+..|+|||++.+..++.++|+||||+++|||++|+.||...........+   .........  .+    .
T Consensus       157 --~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~---~~~~~~~~~--~~----~  225 (285)
T cd05632         157 --SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV---DRRVLETEE--VY----S  225 (285)
T ss_pred             --cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHhhhcccc--cc----C
Confidence              112346899999999999999999999999999999999999998643221111111   111111110  00    1


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChh
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMP  654 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~  654 (706)
                      ...+    ..+.+++..||+.+|++||++.
T Consensus       226 ~~~~----~~~~~li~~~l~~~P~~R~~~~  251 (285)
T cd05632         226 AKFS----EEAKSICKMLLTKDPKQRLGCQ  251 (285)
T ss_pred             ccCC----HHHHHHHHHHccCCHhHcCCCc
Confidence            1111    2346788899999999999943

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.4e-35  Score=307.25  Aligned_cols=263  Identities=28%  Similarity=0.421  Sum_probs=203.8

Q ss_pred             cCCCccceeccCCceeEEEEEeC-----CCcEEEEEEcCccchh-hHHHHHHHHHHHhhcCCcceeeeEeEEEe--CCee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-----DEQEIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNLVKLLGCCIH--GEEK  458 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~  458 (706)
                      ++|++.+.||+|+||.||+|+..     .++.+|||.+...... ..+.+.+|+.+++.++||||+++++++..  +...
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            46788899999999999999863     3678999998764432 56789999999999999999999999887  5578


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++++|.+++....  ..+++..++.++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++..
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKV  158 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccc
Confidence            99999999999999996543  25889999999999999999999987   99999999999999999999999999987


Q ss_pred             cCCCCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCch--------hHHHHHHHH
Q 005236          539 FGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL--------NLIRHAWKL  609 (706)
Q Consensus       539 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~--------~~~~~~~~~  609 (706)
                      ....... .......++..|+|||.+.+..++.++||||||+++|||++|+.|+.........        .........
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05038         159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL  238 (284)
T ss_pred             cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence            6532221 1122234566799999999889999999999999999999999886432211100        001111111


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .........         .......+.+++.+||+.+|.+||||.||+++|+.+
T Consensus       239 ~~~~~~~~~---------~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         239 LKEGERLPR---------PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHcCCcCCC---------CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            111111000         011124577899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.1e-35  Score=304.64  Aligned_cols=240  Identities=22%  Similarity=0.371  Sum_probs=188.0

Q ss_pred             ceeccCCceeEEEEEeCC-------------CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          393 KKLGEGGFGPVYKGTLAD-------------EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      +.||+|+||.||+|+...             ...|++|.+........+.+.+|+.+++.++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999999998532             2358899887655556678889999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC-------eEEee
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN-------PKISD  532 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~-------~kl~D  532 (706)
                      +||||+++++|..++....  ..+++..+++++.||++||+|||+.+   |+||||||+|||++.++.       ++++|
T Consensus        81 lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d  155 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD  155 (262)
T ss_pred             EEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence            9999999999999885432  35788999999999999999999987   999999999999987664       89999


Q ss_pred             eccccccCCCCCcccccccccccCccCccccc-cCCCCcchhhHHHHHHHHHHH-hCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYAS-DGQFSVKSDVFSFGILLLEIV-SGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDv~SlGvil~ell-tG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      ||++......      ....++..|+|||.+. ...++.++||||||+++|||+ +|+.|+......+    ..   ...
T Consensus       156 ~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~----~~---~~~  222 (262)
T cd05077         156 PGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE----KE---RFY  222 (262)
T ss_pred             CCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH----HH---HHH
Confidence            9998764221      2245788999999987 467899999999999999998 5777754321111    11   111


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      .. .. ....+         ....+.+++..||+.||.+||++.+|++.|+
T Consensus       223 ~~-~~-~~~~~---------~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         223 EG-QC-MLVTP---------SCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             hc-Cc-cCCCC---------ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            11 10 01110         1234567899999999999999999998774

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-35  Score=302.32  Aligned_cols=252  Identities=27%  Similarity=0.395  Sum_probs=199.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-----hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-----EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|.+.+.||+|++|.||++... .++.+++|.+....     ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            57899999999999999999874 58899999875421     2234578899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++++|.+++...   ..+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||+++...
T Consensus        82 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~  155 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY---GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ  155 (263)
T ss_pred             EEEECCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence            99999999999998543   34788888999999999999999988   9999999999999999999999999998653


Q ss_pred             CCCCccc-ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGN-TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ....... .....++..|+|||++.+..++.++||||||+++|||++|+.||....   .....   ...........+ 
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~~~~~---~~~~~~~~~~~~-  228 (263)
T cd06625         156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE---AMAAI---FKIATQPTNPQL-  228 (263)
T ss_pred             ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc---hHHHH---HHHhccCCCCCC-
Confidence            3211111 123457889999999999999999999999999999999999974321   11111   111111111111 


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          ....    ...+.+++..||+.+|.+|||+.++++.
T Consensus       229 ----~~~~----~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         229 ----PSHV----SPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             ----CccC----CHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence                1111    1245678899999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.8e-36  Score=300.08  Aligned_cols=253  Identities=25%  Similarity=0.274  Sum_probs=204.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||.|.-|+||++.+.+ +...|+|++.+.   ..+...+.+.|.+||+.++||.|+.||+.++.+...++||
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            567888999999999999999966 588999999764   3444567788999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC-
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG-  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~-  541 (706)
                      |||+||+|..+++.+. .+.+++..+..+|.+++.||+|||-.|   ||.|||||+||||.++|++-|+||.|+..... 
T Consensus       157 eyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~  232 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVS  232 (459)
T ss_pred             ecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence            9999999999886554 466888899999999999999999988   99999999999999999999999999754310 


Q ss_pred             -------C------------------------C-C---------------------cccccccccccCccCccccccCCC
Q 005236          542 -------D------------------------E-T---------------------EGNTNRVVGTYGYMAPEYASDGQF  568 (706)
Q Consensus       542 -------~------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~~  568 (706)
                             +                        . .                     ....+..+||-.|+|||++.+...
T Consensus       233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH  312 (459)
T KOG0610|consen  233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH  312 (459)
T ss_pred             CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence                   0                        0 0                     011223579999999999999999


Q ss_pred             CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCC
Q 005236          569 SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPE  648 (706)
Q Consensus       569 s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~  648 (706)
                      +.++|.|+|||+|||||.|+.||......+....+...     +....+          ...-...+.+||...|..||.
T Consensus       313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~-----~l~Fp~----------~~~vs~~akDLIr~LLvKdP~  377 (459)
T KOG0610|consen  313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQ-----PLKFPE----------EPEVSSAAKDLIRKLLVKDPS  377 (459)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcC-----CCcCCC----------CCcchhHHHHHHHHHhccChh
Confidence            99999999999999999999999776655443332210     111110          112233566889999999999


Q ss_pred             CCCC----hhHHHH
Q 005236          649 DRPC----MPSVIL  658 (706)
Q Consensus       649 ~RPt----~~ev~~  658 (706)
                      +|-.    +.||-+
T Consensus       378 kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  378 KRLGSKRGAAEIKR  391 (459)
T ss_pred             hhhccccchHHhhc
Confidence            9998    777754

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-36  Score=315.63  Aligned_cols=252  Identities=23%  Similarity=0.315  Sum_probs=208.0

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccch---hhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISE---QGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  459 (706)
                      ..+.|++.+.||+|.||.||+++.+. |+.+|+|.+.+...   ...+.+.+|+.+|+++. |||||.+++.+++....+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            44689999999999999999999866 99999999976433   34568999999999998 999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC----CCeEEeeecc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD----MNPKISDFGL  535 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~----~~~kl~Dfgl  535 (706)
                      +|||++.||.|.+.|...    .+++.....++.|++.+++|||+.+   ++||||||+|+|+...    +.+|++|||+
T Consensus       113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGl  185 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGL  185 (382)
T ss_pred             EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence            999999999999999765    2899999999999999999999988   9999999999999643    4799999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      +.....   .......+||+.|+|||++....|+..+||||+||++|.|++|..||...........+       ..+..
T Consensus       186 a~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i-------~~~~~  255 (382)
T KOG0032|consen  186 AKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAI-------LRGDF  255 (382)
T ss_pred             ceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHH-------HcCCC
Confidence            998754   33445689999999999999999999999999999999999999998654433322211       11111


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       ++.++.+..     -...+.+++..|+..||.+|+|+.++++.
T Consensus       256 -~f~~~~w~~-----is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  256 -DFTSEPWDD-----ISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             -CCCCCCccc-----cCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence             111111111     12345678899999999999999999994

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=2.3e-35  Score=303.47  Aligned_cols=254  Identities=24%  Similarity=0.382  Sum_probs=188.1

Q ss_pred             ceeccCCceeEEEEEeCC---CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD---EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      ++||+|+||.||+|...+   ...+++|.+... .......+.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            369999999999997643   346888887543 3344567889999999999999999999999999999999999999


Q ss_pred             Chhhhhhcccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          469 SLDSFIFDQER--CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       469 sL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +|.+++.....  ....++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  157 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI  157 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhee
Confidence            99999976432  233567788899999999999999987   9999999999999999999999999987643322222


Q ss_pred             cccccccccCccCcccccc-------CCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          547 NTNRVVGTYGYMAPEYASD-------GQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~-------~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ......++..|+|||++..       ..++.++||||||+++|||++ |..|+.....   .......   .... ...+
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~~~~~---~~~~-~~~~  230 (269)
T cd05042         158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD---EQVLKQV---VREQ-DIKL  230 (269)
T ss_pred             ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHHH---hhcc-CccC
Confidence            2233446778999998743       356889999999999999999 6777643221   1111111   1111 1111


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ..+.+....+    ..+.+++..|+ .+|.+|||+++|+++|.
T Consensus       231 ~~~~~~~~~~----~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         231 PKPQLDLKYS----DRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCCcccccCC----HHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            1222211222    22345666787 59999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=2.9e-35  Score=300.47  Aligned_cols=248  Identities=27%  Similarity=0.400  Sum_probs=193.2

Q ss_pred             eeccCCceeEEEEEeC---CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCC
Q 005236          394 KLGEGGFGPVYKGTLA---DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKS  469 (706)
Q Consensus       394 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs  469 (706)
                      .||+|+||.||+|.+.   .+..||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4899999999999764   34569999986543 344567999999999999999999999875 457899999999999


Q ss_pred             hhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc-cc
Q 005236          470 LDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-NT  548 (706)
Q Consensus       470 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~-~~  548 (706)
                      |.+++...  ...+++..+++++.||+.||.|||+.+   ++||||||+|||++.++.+||+|||+++.+....... ..
T Consensus        81 L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  155 (257)
T cd05115          81 LNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR  155 (257)
T ss_pred             HHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence            99998643  245889999999999999999999987   9999999999999999999999999998654332211 11


Q ss_pred             cccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       549 ~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      ....++..|+|||.+....++.++||||||+++|||++ |+.||......   ...    .....+..... +       
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~----~~~~~~~~~~~-~-------  220 (257)
T cd05115         156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP---EVM----SFIEQGKRLDC-P-------  220 (257)
T ss_pred             CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH---HHH----HHHHCCCCCCC-C-------
Confidence            11234578999999988889999999999999999996 99997543221   111    11111111111 0       


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       ......+.+++..||+.+|++||++.+|++.|+..
T Consensus       221 -~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         221 -AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             -CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence             11123556789999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=2.4e-35  Score=300.91  Aligned_cols=249  Identities=26%  Similarity=0.384  Sum_probs=197.4

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEE-eCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCI-HGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lV~e~~  465 (706)
                      ++|.+.+.||+|+||.||++... +..+++|.+....  ..+.+.+|+.++++++|+|++++++++. +++..++||||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            57889999999999999999875 6789999886432  3467889999999999999999999765 456789999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...+++..++.++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++......  
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--  156 (256)
T cd05082          83 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--  156 (256)
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence            9999999986533 245889999999999999999999987   9999999999999999999999999988643221  


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                         ....++..|+|||++....++.++||||||+++|||++ |+.|+.....   ......    ..........+    
T Consensus       157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---~~~~~~----~~~~~~~~~~~----  222 (256)
T cd05082         157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPR----VEKGYKMDAPD----  222 (256)
T ss_pred             ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHH----HhcCCCCCCCC----
Confidence               12334668999999999899999999999999999998 8888643211   111111    11111111111    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       .    ....+.+++.+|++.+|.+|||+.++++.|+.+
T Consensus       223 -~----~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         223 -G----CPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             -C----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence             1    123456789999999999999999999999753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-35  Score=302.45  Aligned_cols=248  Identities=29%  Similarity=0.439  Sum_probs=197.0

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccch-hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCChh
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLD  471 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~  471 (706)
                      ++||+|+||.||++.+.+++.|++|++..... ...+.+.+|+.++++++||||+++++++.+....++||||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            47999999999999987799999999865433 35678999999999999999999999999999999999999999999


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccccccc
Q 005236          472 SFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV  551 (706)
Q Consensus       472 ~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~  551 (706)
                      +++....  ..+++..++.++.+++.+|.|||+.+   ++||||+|+||+++.++.+||+|||+++..............
T Consensus        81 ~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  155 (251)
T cd05041          81 TFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK  155 (251)
T ss_pred             HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence            9986532  35788899999999999999999987   999999999999999999999999999865422211111222


Q ss_pred             ccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHH
Q 005236          552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLA  630 (706)
Q Consensus       552 ~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  630 (706)
                      ..+..|+|||.+.+..++.++||||||+++|||++ |..|+.......   ....    .........         ...
T Consensus       156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---~~~~----~~~~~~~~~---------~~~  219 (251)
T cd05041         156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---TRER----IESGYRMPA---------PQL  219 (251)
T ss_pred             cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---HHHH----HhcCCCCCC---------Ccc
Confidence            34667999999988899999999999999999999 777764432211   1111    111110000         001


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          631 EVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       631 ~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ....+.+++.+|++.+|.+||++.||++.|.
T Consensus       220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            1235678999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=2.2e-35  Score=303.79  Aligned_cols=249  Identities=29%  Similarity=0.440  Sum_probs=193.7

Q ss_pred             ceeccCCceeEEEEEeCC-Cc--EEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD-EQ--EIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+|++.+ +.  .+++|.+... .....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            468999999999999854 33  4688888653 345567889999999999 799999999999999999999999999


Q ss_pred             CChhhhhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          468 KSLDSFIFDQE-------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       468 gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                      ++|.+++....             ....+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence            99999996532             1234788999999999999999999987   9999999999999999999999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      ++.....   .........+..|+|||++....++.++||||||+++|||++ |..||......   .....    ....
T Consensus       158 l~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~----~~~~  227 (270)
T cd05047         158 LSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEK----LPQG  227 (270)
T ss_pred             Cccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH---HHHHH----HhCC
Confidence            9863211   111111234567999999988899999999999999999997 99987432211   11111    1111


Q ss_pred             CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          614 MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       614 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...+...     .    ....+.+++.+|++.+|.+|||+.++++.|+.+
T Consensus       228 ~~~~~~~-----~----~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         228 YRLEKPL-----N----CDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             CCCCCCC-----c----CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            1111100     1    112466899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.6e-35  Score=308.99  Aligned_cols=251  Identities=23%  Similarity=0.393  Sum_probs=201.6

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ..+|++.+.||+|+||.||+|.. .+++.|++|.+........+.+.+|+.+++.+.||||+++++.+..+...++||||
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            35899999999999999999987 45889999998765555567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++..    ..+++..+..++.|++.||+|||+.+   |+|+||||+||+++.++.+||+|||++........
T Consensus        99 ~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654          99 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             cCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence            999999999853    24788899999999999999999988   99999999999999999999999999886532221


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        ......+++.|+|||.+.+..++.++|||||||++|||++|+.||......   ....   ........ .+..    
T Consensus       172 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~---~~~~---~~~~~~~~-~~~~----  238 (296)
T cd06654         172 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL---RALY---LIATNGTP-ELQN----  238 (296)
T ss_pred             --ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH---HhHH---HHhcCCCC-CCCC----
Confidence              122346889999999999888999999999999999999999998543221   1111   11111111 1000    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                         ...-...+.+++.+||+.+|++||++.|+++.
T Consensus       239 ---~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         239 ---PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             ---ccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence               00111245678899999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.3e-35  Score=308.01  Aligned_cols=254  Identities=24%  Similarity=0.387  Sum_probs=199.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.+.||+|+||.||+++.. .++.||+|.+... .....+.+.+|+.++++++||||+++++.+...+..++||||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            46889999999999999999985 6889999988643 444467889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|..++........+++..+..++.||+.||.|||+..  +++|+||||+||+++.++.+||+|||++..+...  
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--  156 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--  156 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence            999999999865433446899999999999999999999742  3999999999999999999999999999765322  


Q ss_pred             cccccccccccCccCccccccC------CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDG------QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~------~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                        ......++..|+|||.+.+.      .++.++|||||||++|||++|+.||.......   .... ...........+
T Consensus       157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~-~~~~~~~~~~~~  230 (286)
T cd06622         157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IFAQ-LSAIVDGDPPTL  230 (286)
T ss_pred             --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HHHH-HHHHhhcCCCCC
Confidence              12224578899999998554      35889999999999999999999975422211   1111 111111111111


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..         .....+.+++.+||+.+|.+||++++++..
T Consensus       231 ~~---------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         231 PS---------GYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             Cc---------ccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            11         112345678899999999999999999863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=7.4e-36  Score=304.59  Aligned_cols=252  Identities=27%  Similarity=0.465  Sum_probs=200.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      .+|++.+.||+|+||.||+|.+.++..+|+|++.... .....+.+|+.++++++||||+++++++......++||||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            4688889999999999999998778899999886432 234578899999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++....  ..+++..+..++.|++.+|+|||+.+   ++|+||||+||+++.++.+||+|||+++........ 
T Consensus        83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-  156 (256)
T cd05112          83 HGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT-  156 (256)
T ss_pred             CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCccc-
Confidence            999999986433  34788999999999999999999987   999999999999999999999999999865432211 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......++.+|+|||.+.+..++.++||||||+++|||++ |+.|+.....   .......    .....  ...+..  
T Consensus       157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~~----~~~~~--~~~~~~--  225 (256)
T cd05112         157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN---SEVVETI----NAGFR--LYKPRL--  225 (256)
T ss_pred             ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHH----hCCCC--CCCCCC--
Confidence            1112235678999999998899999999999999999998 8888753221   1111111    11100  001100  


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                           ....+.+++.+||+.+|.+||++.||++.|.
T Consensus       226 -----~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         226 -----ASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             -----CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence                 1235778999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.4e-35  Score=314.35  Aligned_cols=201  Identities=24%  Similarity=0.335  Sum_probs=172.6

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|.+.++||+|+||.||+++.. .++.||+|.+.+.   .....+.+.+|..++..++|+||+++++++.+.+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47899999999999999999985 4778999998652   2233456788999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++....  ..+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+...
T Consensus        81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence            9999999999996532  35788889999999999999999988   999999999999999999999999999876433


Q ss_pred             CCcccccccccccCccCcccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASD-----GQFSVKSDVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDv~SlGvil~elltG~~p~~~  593 (706)
                      ... ......||+.|+|||++.+     ..++.++||||||++||||++|+.||..
T Consensus       156 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~  210 (331)
T cd05624         156 GTV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             Cce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence            221 1223568999999999875     4678999999999999999999999753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.6e-35  Score=315.35  Aligned_cols=193  Identities=23%  Similarity=0.330  Sum_probs=164.5

Q ss_pred             HhccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ....+|++.+.||+|+||.||+|+... ++.||+|.....      ....|+.++++++||||+++++++.+....++||
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence            344689999999999999999999854 678899975432      2356899999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+. ++|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus       137 e~~~-~~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  210 (357)
T PHA03209        137 PHYS-SDLYTYLTKR--SRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA  210 (357)
T ss_pred             EccC-CcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence            9995 5888887543  345889999999999999999999988   999999999999999999999999999753221


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCC
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNR  591 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~  591 (706)
                         .......||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus       211 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        211 ---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence               1222356899999999999999999999999999999999976554

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.2e-35  Score=306.21  Aligned_cols=239  Identities=23%  Similarity=0.320  Sum_probs=186.1

Q ss_pred             eeccCCceeEEEEEeCC-------------------------CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeee
Q 005236          394 KLGEGGFGPVYKGTLAD-------------------------EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL  448 (706)
Q Consensus       394 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l  448 (706)
                      .||+|+||.||+|.+..                         ...|++|.+..........+.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            69999999999997521                         13588998866555555678899999999999999999


Q ss_pred             EeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC--
Q 005236          449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM--  526 (706)
Q Consensus       449 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~--  526 (706)
                      ++++.+....++||||+++|+|..++...  ...+++..+..++.||++||+|||+.+   |+||||||+|||++..+  
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~  156 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA  156 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence            99999999999999999999999998543  245788999999999999999999887   99999999999998654  


Q ss_pred             -----CeEEeeeccccccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHH-hCCCCCCCCCCCCc
Q 005236          527 -----NPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIV-SGKKNRGFYHSDNK  599 (706)
Q Consensus       527 -----~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~ell-tG~~p~~~~~~~~~  599 (706)
                           .+|++|||++......      ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.|+........
T Consensus       157 ~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  230 (274)
T cd05076         157 EGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK  230 (274)
T ss_pred             cCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence                 3899999998653211      12356788999998865 56899999999999999995 68888754322111


Q ss_pred             hhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          600 LNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       600 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                         ......   ......        ..    ...+.+++..||+.+|.+||++++|++.|.
T Consensus       231 ---~~~~~~---~~~~~~--------~~----~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         231 ---ERFYEK---KHRLPE--------PS----CKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             ---HHHHHh---ccCCCC--------CC----ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence               111000   000000        00    124667899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.8e-35  Score=299.64  Aligned_cols=248  Identities=33%  Similarity=0.475  Sum_probs=195.0

Q ss_pred             ceeccCCceeEEEEEeCC----CcEEEEEEcCccch-hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD----EQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      ++||+|+||.||+|+...    +..+|+|.+..... ...+.+.+|+.+++++.||||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            479999999999997632    26899999875433 34568899999999999999999999875 5678999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc-
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-  546 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~-  546 (706)
                      ++|.+++....   .+++..+..++.|++.||+|||+.+   ++|+||||+|||++.++.+||+|||+++......... 
T Consensus        80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~  153 (257)
T cd05060          80 GPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR  153 (257)
T ss_pred             CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence            99999996543   5789999999999999999999987   9999999999999999999999999998764332211 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......++..|+|||.+....++.++||||||+++|||++ |+.||.....   ........    ........     .
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~~----~~~~~~~~-----~  221 (257)
T cd05060         154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAMLE----SGERLPRP-----E  221 (257)
T ss_pred             cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHH----cCCcCCCC-----C
Confidence            1111234568999999999999999999999999999998 8998754322   12222211    11111110     0


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..    ...+.+++.+||+.+|.+||++.+|++.|+..
T Consensus       222 ~~----~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         222 EC----PQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CC----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            11    13566899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=3.1e-35  Score=300.81  Aligned_cols=254  Identities=31%  Similarity=0.463  Sum_probs=202.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .++|.+.++||+|+||.||++...++..+++|.+... ....+.+.+|+.++++++|+||+++++.+.+ ...+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~   82 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM   82 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence            4688999999999999999999888888999988653 3345678899999999999999999999887 7789999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||++..+......
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          83 AKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             CCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence            9999999996543 345788899999999999999999887   999999999999999999999999999876432211


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                       ......++..|+|||++....++.++|+||||+++|+|++ |+.||.....   ......    ..........     
T Consensus       159 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~~----~~~~~~~~~~-----  225 (260)
T cd05073         159 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---PEVIRA----LERGYRMPRP-----  225 (260)
T ss_pred             -cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH---HHHHHH----HhCCCCCCCc-----
Confidence             1122345678999999998899999999999999999999 8888753221   111111    1111111111     


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      .    .....+.+++.+|++.+|++||++.+|.++|+.
T Consensus       226 ~----~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         226 E----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             c----cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            1    112346688999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=3.2e-36  Score=318.51  Aligned_cols=242  Identities=24%  Similarity=0.295  Sum_probs=186.0

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHH-HHHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEI-ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+++.. +++.||+|++....   ......+..|. .+++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            47999999999999985 46789999986432   12233444444 456789999999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      ++|.+++...   ..+....+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 ~~L~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~~  152 (325)
T cd05602          81 GELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GT  152 (325)
T ss_pred             CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC--CC
Confidence            9999998643   34677788889999999999999988   9999999999999999999999999997542211  12


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   .......   ... .. .+ .    ...
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i---~~~-~~-~~-~----~~~  219 (325)
T cd05602         153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---AEMYDNI---LNK-PL-QL-K----PNI  219 (325)
T ss_pred             cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH---HHHHHHH---HhC-Cc-CC-C----CCC
Confidence            3345799999999999999999999999999999999999999853221   1111111   111 10 00 0    011


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          ...+.+++..||+.+|.+||++.+.+..
T Consensus       220 ----~~~~~~li~~~l~~~p~~R~~~~~~~~~  247 (325)
T cd05602         220 ----TNSARHLLEGLLQKDRTKRLGAKDDFME  247 (325)
T ss_pred             ----CHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence                1235578889999999999998754433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=9.8e-36  Score=308.81  Aligned_cols=262  Identities=24%  Similarity=0.341  Sum_probs=196.6

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|++.+.||+|++|.||+|+.. +++.||||++...  .....+.+.+|+.++++++||||+++++++.++...++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4788899999999999999985 5889999998643  223346788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      ++ ++|.+++........+++..+..++.||++||+|||+.+   ++|+||||+||++++++.+||+|||++....... 
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-  155 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-  155 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence            97 688888865544466899999999999999999999987   9999999999999999999999999998653221 


Q ss_pred             cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC---C------
Q 005236          545 EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG---M------  614 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~------  614 (706)
                       .......+++.|+|||++.+. .++.++||||||+++|||++|+.||........  .. .....+...   .      
T Consensus       156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~  231 (285)
T cd07861         156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ--LF-RIFRILGTPTEDVWPGVTS  231 (285)
T ss_pred             -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HH-HHHHHhCCCChhhhhcchh
Confidence             111223568899999988654 578999999999999999999999754322111  10 000000000   0      


Q ss_pred             -------CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          615 -------PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       615 -------~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                             ........+.... ..-..++.+++.+||+.||.+|||+.+|+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         232 LPDYKNTFPKWKKGSLRSAV-KNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             hHHHHhhccccCcchhHHhc-CCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence                   0000000000000 0011245689999999999999999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=7e-36  Score=315.47  Aligned_cols=237  Identities=23%  Similarity=0.276  Sum_probs=184.5

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHH-HHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEII-LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      ++||+|+||.||+|+.. +++.||+|++.+..   ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            47999999999999985 57889999986432   222344555554 67889999999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      ++|..++...   ..+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+++.....  ...
T Consensus        81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~  152 (321)
T cd05603          81 GELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EET  152 (321)
T ss_pred             CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CCc
Confidence            9999888543   34778888899999999999999987   999999999999999999999999998753221  112


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.....   ......   .. .... .+.     .. 
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~---i~-~~~~-~~~-----~~-  218 (321)
T cd05603         153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV---SQMYDN---IL-HKPL-QLP-----GG-  218 (321)
T ss_pred             cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH---HHHHHH---Hh-cCCC-CCC-----CC-
Confidence            2345789999999999999999999999999999999999999754221   111111   11 1111 110     01 


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChh
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMP  654 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~  654 (706)
                         ....+.+++.+||+.+|.+||+..
T Consensus       219 ---~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         219 ---KTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             ---CCHHHHHHHHHHccCCHhhcCCCC
Confidence               122466789999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.1e-35  Score=318.92  Aligned_cols=263  Identities=23%  Similarity=0.267  Sum_probs=194.7

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-----
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-----  456 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  456 (706)
                      ..++|++.+.||+|+||.||+++.. .++.||||++...  .....+.+.+|+.+++.++||||+++++++....     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            3478999999999999999999874 4889999998642  3344567889999999999999999999986543     


Q ss_pred             -eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          457 -EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       457 -~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                       ..++||||+++ +|...+.     ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~  169 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  169 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCC
Confidence             46999999976 4555552     23678888999999999999999988   99999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHH-----------
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIR-----------  604 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~-----------  604 (706)
                      ++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||...........+.           
T Consensus       170 a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  246 (359)
T cd07876         170 ARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFM  246 (359)
T ss_pred             ccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHH
Confidence            97643221   2233568999999999999999999999999999999999999986432211100000           


Q ss_pred             -H----HHHHhhc-CCC-----cccccccccC---cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          605 -H----AWKLWNE-GMP-----SQLIDACFKD---SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       605 -~----~~~~~~~-~~~-----~~~~d~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       .    ....... ...     .++.......   .........+.+++.+||+.||++|||+.|++..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         247 NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             HHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence             0    0000000 000     0000000000   0000112346789999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.5e-35  Score=302.82  Aligned_cols=238  Identities=24%  Similarity=0.408  Sum_probs=188.4

Q ss_pred             ceeccCCceeEEEEEeCCCc-----------EEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          393 KKLGEGGFGPVYKGTLADEQ-----------EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      +.||+|+||.||+|.+.+..           .+++|.+...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            47999999999999986533           4778877544333 6788999999999999999999999988 778999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-------CeEEeeec
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-------NPKISDFG  534 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-------~~kl~Dfg  534 (706)
                      |||+++++|.+++.....  .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++       .+||+|||
T Consensus        79 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg  153 (259)
T cd05037          79 EEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPG  153 (259)
T ss_pred             EEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCC
Confidence            999999999999965432  5788999999999999999999887   99999999999999888       79999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccC--CCCcchhhHHHHHHHHHHHhC-CCCCCCCCCCCchhHHHHHHHHhh
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDG--QFSVKSDVFSFGILLLEIVSG-KKNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDv~SlGvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      ++.....      .....++..|+|||++...  .++.++||||||+++|||++| ..|+.......   ....    +.
T Consensus       154 ~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~---~~~~----~~  220 (259)
T cd05037         154 IPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE---KERF----YQ  220 (259)
T ss_pred             ccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh---HHHH----Hh
Confidence            9986532      1224567789999999876  789999999999999999995 66654332111   1111    11


Q ss_pred             cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          612 EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       612 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ......  .+         ....+.+++.+||+.+|.+|||+.+|++.|+
T Consensus       221 ~~~~~~--~~---------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         221 DQHRLP--MP---------DCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             cCCCCC--CC---------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            110000  00         0146678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=9.9e-36  Score=305.73  Aligned_cols=253  Identities=23%  Similarity=0.388  Sum_probs=199.2

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      ++|.+.++||+|+||.||+|+.. +++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++||||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            57888899999999999999874 58889999987655555667889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++...   ..+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++.......  
T Consensus        89 ~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--  160 (267)
T cd06645          89 GGGSLQDIYHVT---GPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI--  160 (267)
T ss_pred             CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence            999999998543   35789999999999999999999988   9999999999999999999999999987653221  


Q ss_pred             ccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .......|+..|+|||++.   ...++.++|||||||++|||++|+.|+........   ..   ..........    .
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~---~~---~~~~~~~~~~----~  230 (267)
T cd06645         161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA---LF---LMTKSNFQPP----K  230 (267)
T ss_pred             cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh---HH---hhhccCCCCC----c
Confidence            1223356899999999974   45688999999999999999999999743222111   10   0000111101    0


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      +......  ...+.+++.+||+.+|++||++++|++.
T Consensus       231 ~~~~~~~--~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         231 LKDKMKW--SNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             ccccCCC--CHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            1110010  1245678999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1e-35  Score=311.26  Aligned_cols=261  Identities=21%  Similarity=0.312  Sum_probs=196.0

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|.+.++||+|+||.||+|+.. .++.||+|.+.... ......+.+|+.++++++||||+++++++......++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            67999999999999999999885 57889999986432 23345677899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      ++ ++|.+++....  ..+++..+..++.||++||+|||+.+   ++|+||||+||++++++.+||+|||++........
T Consensus        86 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  159 (301)
T cd07873          86 LD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  159 (301)
T ss_pred             cc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence            97 58888885432  34788899999999999999999987   99999999999999999999999999976432211


Q ss_pred             cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc---CCCccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE---GMPSQLID  620 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d  620 (706)
                        ......+++.|+|||.+.+. .++.++||||||+++|||++|+.||......   ............   .....+.+
T Consensus       160 --~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  234 (301)
T cd07873         160 --TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE---EQLHFIFRILGTPTEETWPGILS  234 (301)
T ss_pred             --cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCCChhhchhhhc
Confidence              11224568899999998654 5788999999999999999999998643322   111111111110   00000000


Q ss_pred             ---------ccccCc----CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          621 ---------ACFKDS----FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       621 ---------~~~~~~----~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                               +.....    ........+.+++.+||+.||.+|||++|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                     000000    00001124568999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=5.6e-35  Score=304.35  Aligned_cols=253  Identities=28%  Similarity=0.410  Sum_probs=201.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .+.|++.++||+|+||.||+|+... ++.+++|.+........+.+.+|+.+++.++||||+++++.+..+...++||||
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence            3679999999999999999999854 789999999877777778899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|..++.+..  ..+++..+..++.|++.+|+|||+.+   ++||||||+||+++.++.+||+|||++......  
T Consensus        91 ~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--  163 (292)
T cd06644          91 CPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--  163 (292)
T ss_pred             CCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccc--
Confidence            99999998875433  35889999999999999999999887   999999999999999999999999998764221  


Q ss_pred             cccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          545 EGNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ........++..|+|||++.     ...++.++|||||||++|||++|+.|+.....   ...   ..... ........
T Consensus       164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~---~~~~~-~~~~~~~~  236 (292)
T cd06644         164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRV---LLKIA-KSEPPTLS  236 (292)
T ss_pred             ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH---HHH---HHHHh-cCCCccCC
Confidence            11223356788999999985     34578899999999999999999999754321   111   11111 11111110


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .   ...    ....+.+++.+||+.+|++||+++++++.
T Consensus       237 ~---~~~----~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         237 Q---PSK----WSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             C---Ccc----cCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            0   001    11245678899999999999999999763

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=3.2e-35  Score=301.02  Aligned_cols=250  Identities=28%  Similarity=0.424  Sum_probs=190.8

Q ss_pred             ceeccCCceeEEEEEeCC----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEe-CCeeEEEEecCC
Q 005236          393 KKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIH-GEEKLLIYEFMP  466 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV~e~~~  466 (706)
                      +.||+|+||.||+|.+.+    ...+|+|++... .....+.+.+|+.+++.++||||+++++++.. +...++||||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998632    357999998543 34456788899999999999999999998764 456789999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc-
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE-  545 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~-  545 (706)
                      +++|.+++....  ..+++..++.++.|+++||.|||+.+   ++||||||+|||+++++.+||+|||+++.+...... 
T Consensus        81 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~  155 (262)
T cd05058          81 HGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS  155 (262)
T ss_pred             CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence            999999996432  33677788899999999999999887   999999999999999999999999999865332111 


Q ss_pred             -ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCC-CCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          546 -GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK-KNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       546 -~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                       .......++..|+|||.+....++.++||||||+++|||++|. +|+...   ........   ........ . .   
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~---~~~~~~~~---~~~~~~~~-~-~---  224 (262)
T cd05058         156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV---DSFDITVY---LLQGRRLL-Q-P---  224 (262)
T ss_pred             ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHH---HhcCCCCC-C-C---
Confidence             1112234577899999998889999999999999999999965 444321   11222211   11111110 0 0   


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       ...    ...+.+++..||+.+|++||++.||++.|+..
T Consensus       225 -~~~----~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         225 -EYC----PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             -CcC----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence             001    12466899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-35  Score=306.97  Aligned_cols=256  Identities=27%  Similarity=0.407  Sum_probs=201.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-Cc----EEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQ----EIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.+.||+|+||.||+|..++ +.    .+|+|.+.... .....++.+|+.++++++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            578888999999999999998743 32    58999886543 4456788999999999999999999999987 78899


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++|+|.+++....  ..+++..++.++.||+.||+|||+.+   ++|+||||+||++++++.+||+|||+++.+.
T Consensus        86 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             EEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCccccccc
Confidence            999999999999996543  34889999999999999999999987   9999999999999999999999999998765


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ............++..|+|||.+....++.++||||||+++|||++ |+.|+......   +...    .......... 
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~----~~~~~~~~~~-  232 (279)
T cd05057         161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV---EIPD----LLEKGERLPQ-  232 (279)
T ss_pred             CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---HHHH----HHhCCCCCCC-
Confidence            3322222222334678999999988899999999999999999999 99997543221   1111    1111111000 


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                       +   ..    ....+.+++..||..+|.+||++.++++.|....
T Consensus       233 -~---~~----~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~  269 (279)
T cd05057         233 -P---PI----CTIDVYMVLVKCWMIDAESRPTFKELINEFSKMA  269 (279)
T ss_pred             -C---CC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence             0   00    1124567889999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=7.8e-36  Score=315.11  Aligned_cols=241  Identities=24%  Similarity=0.317  Sum_probs=190.4

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~  462 (706)
                      +|.+.+.||+|+||.||+++.. +++.||+|++.+.   .....+.+..|..++..+. |++|+++++++.+.+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            3677899999999999999975 5889999998653   2234466778888888885 577888999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.....
T Consensus        81 Ey~~~g~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~  154 (323)
T cd05615          81 EYVNGGDLMYHIQQV---GKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD  154 (323)
T ss_pred             cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence            999999999998543   34889999999999999999999988   999999999999999999999999998754222


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ........    .... .+.   
T Consensus       155 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~i~----~~~~-~~p---  221 (323)
T cd05615         155 G--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DELFQSIM----EHNV-SYP---  221 (323)
T ss_pred             C--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHH----hCCC-CCC---
Confidence            1  122335689999999999999999999999999999999999999854322   11111111    1111 000   


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM  653 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~  653 (706)
                        ...    ...+.+++.+||+.+|.+|++.
T Consensus       222 --~~~----~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         222 --KSL----SKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             --ccC----CHHHHHHHHHHcccCHhhCCCC
Confidence              011    1245678899999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.4e-35  Score=300.74  Aligned_cols=249  Identities=28%  Similarity=0.444  Sum_probs=201.1

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      ++|++.+.||+|+||.||+|...+ ++.+++|.+.....  .+.+.+|+.++++++||||+++++.+.+....++++||+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            689999999999999999999865 78999999865432  678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++...  ...+++..+..++.|+++||.|||+.+   ++|+||+|+||++++++.+||+|||++..+..... 
T Consensus        81 ~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-  154 (256)
T cd06612          81 GAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-  154 (256)
T ss_pred             CCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence            999999998543  246899999999999999999999987   99999999999999999999999999987643221 


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                       ......++..|+|||++.+..++.++||||||+++|||++|+.|+..........      .. .......+     ..
T Consensus       155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~------~~-~~~~~~~~-----~~  221 (256)
T cd06612         155 -KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF------MI-PNKPPPTL-----SD  221 (256)
T ss_pred             -ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh------hh-ccCCCCCC-----Cc
Confidence             2223457889999999999999999999999999999999999976432211100      00 00000000     00


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                        .......+.+++.+||+.+|.+|||++||++
T Consensus       222 --~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         222 --PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             --hhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence              0011124667889999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=6.6e-35  Score=299.85  Aligned_cols=254  Identities=20%  Similarity=0.372  Sum_probs=187.5

Q ss_pred             ceeccCCceeEEEEEeCCC---cEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          393 KKLGEGGFGPVYKGTLADE---QEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      ++||+|+||.||+|...++   ..+++|.+... .....+.+.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            3699999999999976443   34667766543 2345678999999999999999999999999999999999999999


Q ss_pred             Chhhhhhcccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          469 SLDSFIFDQER-CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       469 sL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      +|.+++.+... ....++..+..++.||++||+|||+.+   ++||||||+|||++.++.+||+|||++...........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  157 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET  157 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence            99999975432 234667778899999999999999987   99999999999999999999999999864322211122


Q ss_pred             ccccccccCccCcccccc-------CCCCcchhhHHHHHHHHHHHhC-CCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          548 TNRVVGTYGYMAPEYASD-------GQFSVKSDVFSFGILLLEIVSG-KKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~-------~~~s~~sDv~SlGvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      .....++..|+|||++..       ..++.++||||||+++|||+++ ..|+....   ........   ..+ ....+.
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~---~~~~~~~~---~~~-~~~~~~  230 (268)
T cd05086         158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS---DREVLNHV---IKD-QQVKLF  230 (268)
T ss_pred             ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHH---Hhh-cccccC
Confidence            223567889999999853       2457899999999999999975 55653221   11222211   111 111222


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ++.+....+    ..+.+++..|+ .+|.+||++++|++.|.
T Consensus       231 ~~~~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         231 KPQLELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCccCCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            222222222    23445777898 57999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-35  Score=314.91  Aligned_cols=201  Identities=24%  Similarity=0.329  Sum_probs=172.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||+++.. +++.||+|++.+.   .....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            47899999999999999999975 4889999998642   2334566889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..+...
T Consensus        81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (331)
T cd05597          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD  155 (331)
T ss_pred             ecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence            999999999999542  234788899999999999999999988   999999999999999999999999999765432


Q ss_pred             CCcccccccccccCccCcccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASD-----GQFSVKSDVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDv~SlGvil~elltG~~p~~~  593 (706)
                      .. .......||+.|+|||++..     ..++.++|||||||++|||++|+.||..
T Consensus       156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  210 (331)
T cd05597         156 GT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             CC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence            21 11223468999999999863     4578899999999999999999999753

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.4e-35  Score=308.25  Aligned_cols=260  Identities=22%  Similarity=0.285  Sum_probs=190.9

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhc---CCcceeeeEeEEEeC-----C
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKL---QHRNLVKLLGCCIHG-----E  456 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~-----~  456 (706)
                      +|++.+.||+|+||.||+|+.. +++.||+|.+....  ......+.+|+.+++++   +||||+++++++...     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4888999999999999999985 58889999886432  12233456677776655   799999999988642     4


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      ..++||||+++ +|.+++.... ...+++..+..++.|++.||.|||+.+   ++||||||+|||+++++.+||+|||++
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence            57899999985 8888885433 244889999999999999999999988   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC---
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG---  613 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---  613 (706)
                      +......   ......+|..|+|||++.+..++.++|||||||++|||++|++||.......   ............   
T Consensus       156 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~  229 (288)
T cd07863         156 RIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFDLIGLPPED  229 (288)
T ss_pred             ccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH---HHHHHHHHhCCCChh
Confidence            8754221   1223567899999999999999999999999999999999999975432211   111111111000   


Q ss_pred             CCc-------ccccccccC---cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          614 MPS-------QLIDACFKD---SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       614 ~~~-------~~~d~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ...       ....+....   .........+.+++.+||+.||++|||+.|++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            000       000000000   000011234568999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.3e-35  Score=310.70  Aligned_cols=257  Identities=27%  Similarity=0.444  Sum_probs=199.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCc----EEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQ----EIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|+..+.||+|+||.||+|++. ++.    .+|+|.+.... .....++.+|+.+++.++||||+++++++... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            56788899999999999999874 333    47888886532 33345788999999999999999999998754 5679


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ++||+++|+|.+++....  ..+++..++.++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||+++.+.
T Consensus        86 v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~  160 (303)
T cd05110          86 VTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE  160 (303)
T ss_pred             eehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccccc
Confidence            999999999999986432  35788899999999999999999987   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ............++..|+|||.+.+..++.++||||||+++|||++ |+.|+.....   ....    ........... 
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~---~~~~----~~~~~~~~~~~-  232 (303)
T cd05110         161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---REIP----DLLEKGERLPQ-  232 (303)
T ss_pred             CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHH----HHHHCCCCCCC-
Confidence            3332222333446778999999999999999999999999999998 8888743221   1111    11111111000 


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                          ...    ....+..++..|+..+|++||++.+|++.|+.+..
T Consensus       233 ----~~~----~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~  270 (303)
T cd05110         233 ----PPI----CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR  270 (303)
T ss_pred             ----CCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence                001    12346678999999999999999999999987533

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.8e-35  Score=305.32  Aligned_cols=257  Identities=25%  Similarity=0.352  Sum_probs=202.9

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.++||+|+||.||++... +++.+|+|++... .....+.+.+|+++++.++||||+++++++......++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            57888999999999999999975 5788999987543 344467889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++...   +.+++..+..++.+++.+|.|||+..  .++|+||+|+||++++++.++|+|||++......  
T Consensus        85 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--  157 (284)
T cd06620          85 MDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--  157 (284)
T ss_pred             CCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh--
Confidence            9999999988543   35889999999999999999999742  2999999999999999999999999998754221  


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC-----chhHHHHHHHHhhcCCCcccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN-----KLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  619 (706)
                        ......|+..|+|||++.+..++.++|||||||++|||++|+.||.......     .............+. ...+.
T Consensus       158 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  234 (284)
T cd06620         158 --IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLP  234 (284)
T ss_pred             --ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCC
Confidence              1223568999999999988899999999999999999999999987543321     111111111221111 11110


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      .        ......+.+++.+|++.+|.+|||++||+++.-
T Consensus       235 ~--------~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~  268 (284)
T cd06620         235 S--------SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP  268 (284)
T ss_pred             c--------hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence            0        011234667899999999999999999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=6.7e-35  Score=299.77  Aligned_cols=255  Identities=25%  Similarity=0.374  Sum_probs=197.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++.+.....||+|+||.||+|++. ++..|++|.+........+.+.+|+.++++++|+||+++++++..++..++|+||
T Consensus         7 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   86 (268)
T cd06624           7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ   86 (268)
T ss_pred             cccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence            445555579999999999999975 4778999998776666778899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-CCCeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgla~~~~~~~  543 (706)
                      +++++|.+++.........++..+..++.||+.||+|||+.+   |+||||||+||+++. ++.++|+|||++.......
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~  163 (268)
T cd06624          87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN  163 (268)
T ss_pred             CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheecccCC
Confidence            999999999965432212377888899999999999999887   999999999999986 6799999999998653322


Q ss_pred             CcccccccccccCccCccccccC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDG--QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      .  ......++..|+|||++...  .++.++||||||+++|+|++|+.|+.......   ..........  ....    
T Consensus       164 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~---~~~~~~~~~~--~~~~----  232 (268)
T cd06624         164 P--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ---AAMFKVGMFK--IHPE----  232 (268)
T ss_pred             C--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh---hhHhhhhhhc--cCCC----
Confidence            1  12224578999999998664  37899999999999999999999975322111   1111000000  0000    


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       +..    .....+.+++.+||+.+|.+|||+.|+++.
T Consensus       233 -~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         233 -IPE----SLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             -CCc----ccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence             011    112346678999999999999999999863

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=3.3e-35  Score=301.46  Aligned_cols=251  Identities=28%  Similarity=0.438  Sum_probs=198.6

Q ss_pred             CCCccceeccCCceeEEEEEeCCCcEEEEEEcCccc------hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS------EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      +|++.+.||+|+||.||+|...+++.+|+|.+....      ....+.+.+|++++++++|+||+++++++.+....++|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            478889999999999999998888999999875321      22345688999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++.+.   ..+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.++|+|||++.....
T Consensus        81 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  154 (265)
T cd06631          81 MEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW  154 (265)
T ss_pred             EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence            9999999999999653   24788888999999999999999987   99999999999999999999999999986532


Q ss_pred             CCC----cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          542 DET----EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       542 ~~~----~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ...    ........++..|+|||++.+..++.++||||||+++|||++|+.||.....   .........  .......
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~--~~~~~~~  229 (265)
T cd06631         155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR---LAAMFYIGA--HRGLMPR  229 (265)
T ss_pred             ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh---HHHHHHhhh--ccCCCCC
Confidence            111    1112234688999999999998999999999999999999999999853221   111111000  0011111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +     ....    ...+.+++.+||+.+|.+||++.|+++
T Consensus       230 ~-----~~~~----~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         230 L-----PDSF----SAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             C-----CCCC----CHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            1     1111    234567899999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=4.4e-35  Score=298.76  Aligned_cols=250  Identities=23%  Similarity=0.348  Sum_probs=200.0

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      +|++.++||+|+||.||+++.. +++.+|+|.+.. ......+.+.+|+.++++++||||+++++.+..++..++||||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            4788899999999999999985 588899998754 23445678889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...++...++.++.|++.||.|||+.+   ++|+||||+||++++++.++|+|||++........ 
T Consensus        81 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-  155 (255)
T cd08219          81 DGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-  155 (255)
T ss_pred             CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccccc-
Confidence            9999999885432 345788899999999999999999988   99999999999999999999999999986533211 


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                       ......+++.|+|||++.+..++.++||||||+++|+|++|+.||....   .......   . ..+....+..     
T Consensus       156 -~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~---~~~~~~~---~-~~~~~~~~~~-----  222 (255)
T cd08219         156 -YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS---WKNLILK---V-CQGSYKPLPS-----  222 (255)
T ss_pred             -ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC---HHHHHHH---H-hcCCCCCCCc-----
Confidence             1223568899999999998899999999999999999999999975322   1111111   1 1111111110     


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..    ...+.+++.+||+.+|.+||++.+|+..
T Consensus       223 ~~----~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         223 HY----SYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             cc----CHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            11    1245678899999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2.6e-35  Score=305.19  Aligned_cols=252  Identities=26%  Similarity=0.389  Sum_probs=198.8

Q ss_pred             CCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      .|++.+.||+|+||.||+|.... +..+++|.+........+.+.+|+.+++.++||||+++++++..++..++||||++
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~   85 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   85 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence            36778999999999999999865 67789998876666667889999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|..++....  ..+++..+..++.|+++||.|||+.+   ++||||||+||+++.++.+||+|||++.......  .
T Consensus        86 ~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~  158 (282)
T cd06643          86 GGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--Q  158 (282)
T ss_pred             CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc--c
Confidence            999998875422  45889999999999999999999987   9999999999999999999999999987653221  1


Q ss_pred             cccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          547 NTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ......++..|+|||++.     ...++.++|||||||++|||++|+.|+.....   ........   ... ...+..+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~---~~~-~~~~~~~  231 (282)
T cd06643         159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP---MRVLLKIA---KSE-PPTLAQP  231 (282)
T ss_pred             ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH---HHHHHHHh---hcC-CCCCCCc
Confidence            223356889999999984     34678899999999999999999999754221   11111111   111 1111000


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                         ...    ...+.+++..||+.+|.+||++.++++.-
T Consensus       232 ---~~~----~~~~~~li~~~l~~~p~~Rp~~~~il~~~  263 (282)
T cd06643         232 ---SRW----SSEFKDFLKKCLEKNVDARWTTTQLLQHP  263 (282)
T ss_pred             ---ccc----CHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence               011    12456788999999999999999987544

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=6.7e-36  Score=305.40  Aligned_cols=240  Identities=25%  Similarity=0.423  Sum_probs=188.3

Q ss_pred             ceeccCCceeEEEEEeCC--------CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          393 KKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +.||+|+||.||+|....        ...+++|.+........+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            479999999999998743        234888887665555667889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC--------eEEeeeccc
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN--------PKISDFGLA  536 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~--------~kl~Dfgla  536 (706)
                      +++|+|..++....  ..+++..++.++.||+.||+|||+.+   |+||||||+||+++.++.        ++++|||++
T Consensus        81 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~  155 (258)
T cd05078          81 VKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS  155 (258)
T ss_pred             CCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccc
Confidence            99999999996543  35788899999999999999999987   999999999999988765        699999988


Q ss_pred             cccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCC-CCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK-KNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      .....      .....++..|+|||++.+ ..++.++||||||+++|||++|. .|+.....   .....    ..... 
T Consensus       156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~---~~~~~----~~~~~-  221 (258)
T cd05078         156 ITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS---QKKLQ----FYEDR-  221 (258)
T ss_pred             cccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH---HHHHH----HHHcc-
Confidence            75432      122457889999999986 45899999999999999999995 44332111   11111    11110 


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                       ..+..     .    ....+.+++..||+.+|.+|||++++++.|+
T Consensus       222 -~~~~~-----~----~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         222 -HQLPA-----P----KWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             -ccCCC-----C----CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence             01111     0    1134678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-35  Score=301.74  Aligned_cols=249  Identities=27%  Similarity=0.447  Sum_probs=201.6

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.+.||.|+||.||+|+.. +++.+++|.+.... ......+.+|+.+++.++||||+++++++.++...++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            46888899999999999999985 57899999986532 44456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++...    .+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||+++.+.... 
T Consensus        81 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-  152 (274)
T cd06609          81 CGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-  152 (274)
T ss_pred             eCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc-
Confidence            9999999998543    5889999999999999999999987   9999999999999999999999999998764322 


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                       .......++..|+|||++.+..++.++||||||+++|||++|+.|+......   ....    .........+...   
T Consensus       153 -~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~---~~~~----~~~~~~~~~~~~~---  221 (274)
T cd06609         153 -SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM---RVLF----LIPKNNPPSLEGN---  221 (274)
T ss_pred             -cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH---HHHH----HhhhcCCCCCccc---
Confidence             1223356788999999999989999999999999999999999998543321   1111    1111111111110   


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       ..    ...+.+++..||+.+|++|||++++++.
T Consensus       222 -~~----~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         222 -KF----SKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             -cc----CHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence             01    1245678889999999999999999873

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=2.9e-35  Score=302.52  Aligned_cols=251  Identities=34%  Similarity=0.501  Sum_probs=196.0

Q ss_pred             ceeccCCceeEEEEEeCC-------CcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          393 KKLGEGGFGPVYKGTLAD-------EQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +.||+|+||.||+|+..+       ++.+++|.+.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            468999999999998753       2578999876532 34466889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccc----ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-----CeEEeeecc
Q 005236          465 MPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-----NPKISDFGL  535 (706)
Q Consensus       465 ~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-----~~kl~Dfgl  535 (706)
                      +++++|.+++....    ....+++..++.++.|++.||+|||+.+   ++|+||||+||+++.++     .++|+|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence            99999999997532    2234788999999999999999999887   99999999999999887     899999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      ++.+.............++..|+|||++.+..++.++||||||+++|||++ |+.|+.....   .......    ..+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---~~~~~~~----~~~~  230 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---QEVLQHV----TAGG  230 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH---HHHHHHH----hcCC
Confidence            986543322222223345788999999999999999999999999999998 9988753221   1111111    1111


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      .....       .  .....+.+++.+||+.+|.+||++.+|++.|+.
T Consensus       231 ~~~~~-------~--~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         231 RLQKP-------E--NCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             ccCCc-------c--cchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            10000       0  112345689999999999999999999999863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-36  Score=314.95  Aligned_cols=258  Identities=29%  Similarity=0.457  Sum_probs=205.7

Q ss_pred             ceeccCCceeEEEEEeCCC-cEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCChh
Q 005236          393 KKLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLD  471 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~  471 (706)
                      -+||+|.||+||.|++.+. ..+|||.+........+-+.+|+.+-++|+|.|||+++|.+.+++..-+.||-++||+|.
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            3799999999999998664 578999998777777788899999999999999999999999999999999999999999


Q ss_pred             hhhhcccccCCC--CHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-CCCCeEEeeeccccccCCCCCcccc
Q 005236          472 SFIFDQERCKLL--DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGGDETEGNT  548 (706)
Q Consensus       472 ~~l~~~~~~~~l--~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~  548 (706)
                      ++|+.+  .+++  .+.++-.+-.||++||.|||++.   |||||||-.||||+ -.|.+||+|||.++.+..  ....+
T Consensus       661 sLLrsk--WGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP~T  733 (1226)
T KOG4279|consen  661 SLLRSK--WGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INPCT  733 (1226)
T ss_pred             HHHHhc--cCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhcc--CCccc
Confidence            999643  3444  67788889999999999999987   99999999999997 568999999999998743  33345


Q ss_pred             cccccccCccCccccccC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          549 NRVVGTYGYMAPEYASDG--QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       549 ~~~~gt~~y~aPE~~~~~--~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                      ....||..|||||++..+  .|..++|||||||++.||.||++||........        .+++-++.+      ....
T Consensus       734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--------AMFkVGmyK------vHP~  799 (1226)
T KOG4279|consen  734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--------AMFKVGMYK------VHPP  799 (1226)
T ss_pred             cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--------hhhhhccee------cCCC
Confidence            567899999999999765  688999999999999999999999854322111        111112211      0112


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH--HhcCCCCCCCCCC
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL--MLGSEIVLPQPKQ  671 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~--~L~~~~~~~~p~~  671 (706)
                      .+.+-..++..++++|+..+|.+||+++++++  +|+--...+.|+.
T Consensus       800 iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk~r~~l  846 (1226)
T KOG4279|consen  800 IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKKPRPKL  846 (1226)
T ss_pred             CcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCCCCCCC
Confidence            23344556778999999999999999999985  3443333344443

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=2.6e-35  Score=316.71  Aligned_cols=260  Identities=23%  Similarity=0.282  Sum_probs=195.7

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC------
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG------  455 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  455 (706)
                      ..++|.+.+.||+|+||.||++... .++.||||++...  .....+.+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            3478999999999999999999874 4788999998653  334456788999999999999999999987543      


Q ss_pred             CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                      ...++||||+++ +|.+++..     .+++..+..++.|+++||+|||+.+   |+||||||+|||++.++.+||+|||+
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCC
Confidence            357999999975 66666632     3778888999999999999999987   99999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc---
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE---  612 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---  612 (706)
                      ++......   ......+|..|+|||++.+..++.++|||||||++|||++|+.||......   ............   
T Consensus       173 a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~  246 (364)
T cd07875         173 ARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI---DQWNKVIEQLGTPCP  246 (364)
T ss_pred             ccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCCH
Confidence            98653221   223356899999999999999999999999999999999999998543321   111111111000   


Q ss_pred             ---------------CCC-------ccccccccc---CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          613 ---------------GMP-------SQLIDACFK---DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       613 ---------------~~~-------~~~~d~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                                     ..+       ..+......   ..........+.+++.+||+.||.+|||+.|+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                           000       000000000   00011112356789999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=9e-36  Score=319.24  Aligned_cols=260  Identities=25%  Similarity=0.290  Sum_probs=195.3

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC------
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG------  455 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  455 (706)
                      ..++|.+.+.||+|+||.||++... .++.||||++...  .....+.+.+|+.+++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            4578999999999999999999874 5789999998653  333456788899999999999999999988643      


Q ss_pred             CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                      ...++||||+++ +|.+.+.     ..+++..+..++.|+++||.|||+.+   |+||||||+|||++.++.+||+|||+
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~  165 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcc
Confidence            346999999975 5666553     23778888999999999999999988   99999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh----
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN----  611 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~----  611 (706)
                      ++.....   .......||..|+|||++.+..++.++|||||||++|||++|+.||......   ...........    
T Consensus       166 ~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~~  239 (355)
T cd07874         166 ARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIEQLGTPCP  239 (355)
T ss_pred             cccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCH
Confidence            9865322   1223357899999999999999999999999999999999999998543211   11111110000    


Q ss_pred             --------------cCC--C-----ccc-cccccc--CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          612 --------------EGM--P-----SQL-IDACFK--DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       612 --------------~~~--~-----~~~-~d~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                                    ...  .     ... .+....  ..........+.+++.+||+.||++|||+.|+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence                          000  0     000 000000  00001112356789999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=4e-35  Score=306.15  Aligned_cols=251  Identities=24%  Similarity=0.397  Sum_probs=201.7

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ...+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus        17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   96 (297)
T cd06656          17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   96 (297)
T ss_pred             hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence            346899999999999999999997 4688999999876555556778999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++.+    ..+++..+..++.|++.||.|||+.+   ++||||||+|||++.++.++|+|||++.......
T Consensus        97 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~  169 (297)
T cd06656          97 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  169 (297)
T ss_pred             ccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence            9999999999853    34788899999999999999999987   9999999999999999999999999998653322


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      .  ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||..........      .....+.. .+..   
T Consensus       170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~~~~~-~~~~---  237 (297)
T cd06656         170 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGTP-ELQN---  237 (297)
T ss_pred             c--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eeccCCCC-CCCC---
Confidence            1  1223467889999999999999999999999999999999999985432211100      00001100 0000   


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                          .......+.+++.+||+.+|.+||++++|++
T Consensus       238 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         238 ----PERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             ----ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                0011123567889999999999999999988

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=9.7e-35  Score=296.36  Aligned_cols=251  Identities=26%  Similarity=0.406  Sum_probs=202.5

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|+..+.||+|+||.||.++.. +++.+++|++...  .....+.+.+|+.++++++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            5888999999999999999874 5788999987542  445567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++.... ...+++..+..++.|++++|.|||+.+   ++|+||+|+||++++++.+||+|||++........
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~  156 (256)
T cd08221          81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS  156 (256)
T ss_pred             cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence            99999999996543 345789999999999999999999987   99999999999999999999999999987643322


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        ......+++.|+|||.+.+..++.++||||||+++|||++|+.|+.....   .....   ... .+......     
T Consensus       157 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~---~~~~~---~~~-~~~~~~~~-----  222 (256)
T cd08221         157 --MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP---LNLVV---KIV-QGNYTPVV-----  222 (256)
T ss_pred             --cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH---HHHHH---HHH-cCCCCCCc-----
Confidence              22335689999999999988899999999999999999999999753221   11111   111 11111111     


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                      ..    ....+.+++.+||+.+|.+||+++++++.+
T Consensus       223 ~~----~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         223 SV----YSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             cc----cCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            11    123466788999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=2.5e-35  Score=307.39  Aligned_cols=250  Identities=24%  Similarity=0.419  Sum_probs=201.0

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .+|++.+.||.|+||.||+|.. .+++.|++|.+........+.+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4699999999999999999987 568899999986655555678899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|..++..    ..+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||++..+..... 
T Consensus        99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-  170 (296)
T cd06655          99 AGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-  170 (296)
T ss_pred             CCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc-
Confidence            99999998853    24789999999999999999999988   99999999999999999999999999886543322 


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                       ......++..|+|||.+.+..++.++|||||||++|+|++|+.||.......   ....   ..... ...+..+   .
T Consensus       171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~---~~~~---~~~~~-~~~~~~~---~  239 (296)
T cd06655         171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYL---IATNG-TPELQNP---E  239 (296)
T ss_pred             -cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHH---HHhcC-CcccCCc---c
Confidence             1223468889999999999899999999999999999999999975432211   1111   11111 1111000   0


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..+    ..+.+++.+||+.+|.+||++.++++.
T Consensus       240 ~~~----~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         240 KLS----PIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             cCC----HHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            111    235578899999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=8.1e-35  Score=298.89  Aligned_cols=249  Identities=27%  Similarity=0.423  Sum_probs=197.3

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch---------hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE---------QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  457 (706)
                      +|.+...||+|+||.||+|... +++.+|+|.+.....         ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            4778899999999999999874 578899998754321         223578899999999999999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+++++|.+++...   ..+++..+..++.|++.||+|||+.+   ++||||+|+||++++++.+||+|||+++
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~  154 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISK  154 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCc
Confidence            99999999999999999543   34788889999999999999999987   9999999999999999999999999998


Q ss_pred             ccCCCCCcc----cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          538 AFGGDETEG----NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       538 ~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      .+.......    ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.....   ...+....    ..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~----~~  227 (267)
T cd06628         155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQAIFKIG----EN  227 (267)
T ss_pred             ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH---HHHHHHHh----cc
Confidence            764321111    11224578899999999998999999999999999999999999754221   11111111    11


Q ss_pred             CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          614 MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       614 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ....+.     .    .....+.+++.+||+.+|.+||++.||++
T Consensus       228 ~~~~~~-----~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         228 ASPEIP-----S----NISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             CCCcCC-----c----ccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            111110     1    11234567889999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=4e-35  Score=302.60  Aligned_cols=256  Identities=27%  Similarity=0.416  Sum_probs=201.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCccchh-hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      ++|++.+.||+|+||.||+|+.+      +.+.+++|.+...... ..+.+.+|+.++++++||||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            57889999999999999999864      2457899988654433 4678999999999999999999999999989999


Q ss_pred             EEEecCCCCChhhhhhccccc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeee
Q 005236          460 LIYEFMPNKSLDSFIFDQERC------KLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDF  533 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df  533 (706)
                      +||||+++++|.+++......      ..+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.++|+||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence            999999999999999654422      25899999999999999999999988   999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhc
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNE  612 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~  612 (706)
                      |+++....... .......++..|+|||.+.+...+.++||||||+++|+|++ |..||.....   ......    ...
T Consensus       162 ~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~---~~~~~~----~~~  233 (275)
T cd05046         162 SLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD---EEVLNR----LQA  233 (275)
T ss_pred             ccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch---HHHHHH----HHc
Confidence            99875432221 12223456788999999988889999999999999999999 7777643221   111111    111


Q ss_pred             CCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       613 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      .......    ....    ...+.+++.+||+.+|.+||++.|+++.|.
T Consensus       234 ~~~~~~~----~~~~----~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         234 GKLELPV----PEGC----PSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CCcCCCC----CCCC----CHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            1111000    0111    125667999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=3.1e-35  Score=305.13  Aligned_cols=265  Identities=23%  Similarity=0.324  Sum_probs=199.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.+.||+|+||.||+|+.. +++.||+|++....  ....+.+.+|+.++++++||||+++++++......++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46888999999999999999986 58899999885432  2234567899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|..++...   ..+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||++..+....
T Consensus        81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07847          81 YCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPG  154 (286)
T ss_pred             ccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence            99999998877432   34889999999999999999999987   9999999999999999999999999998764332


Q ss_pred             CcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHH--------HhhcCC
Q 005236          544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK--------LWNEGM  614 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~--------~~~~~~  614 (706)
                      .  ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+....+.....        .+....
T Consensus       155 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T cd07847         155 D--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ  232 (286)
T ss_pred             c--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccc
Confidence            1  1223457889999999876 5688999999999999999999999864332221111111100        000000


Q ss_pred             -CcccccccccCcCCHHH-----HHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          615 -PSQLIDACFKDSFNLAE-----VIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       615 -~~~~~d~~~~~~~~~~~-----~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       ......+........+.     ...+.+++.+||+.+|++||++.|++..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence             00000011111111111     2356789999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=7.5e-35  Score=300.18  Aligned_cols=256  Identities=23%  Similarity=0.365  Sum_probs=198.2

Q ss_pred             CCccceeccCCceeEEEEEeC----CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC------
Q 005236          389 FSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE------  456 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  456 (706)
                      |.+.+.||+|+||.||+|.+.    .++.||||.+...  .....+++.+|+.++++++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            567789999999999999863    3678999988653  3445678899999999999999999999886543      


Q ss_pred             eeEEEEecCCCCChhhhhhccc---ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeee
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQE---RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDF  533 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df  533 (706)
                      ..++++||+++|+|..++....   ....+++..++.++.||+.||+|||+.+   |+||||||+||++++++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence            2378899999999998875322   2234788899999999999999999987   999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhc
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNE  612 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~  612 (706)
                      |+++...............+++.|++||.+....++.++||||||+++|||++ |+.|+....   .........   ..
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~---~~~~~~~~~---~~  231 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE---NSEIYNYLI---KG  231 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC---HHHHHHHHH---cC
Confidence            99987643332222223455678999999999999999999999999999999 788864322   111111111   11


Q ss_pred             CCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       613 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .... .         .......+.+++.+||+.+|.+||++++|++.|+++
T Consensus       232 ~~~~-~---------~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         232 NRLK-Q---------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CcCC-C---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1110 0         001123577899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=3.5e-35  Score=309.70  Aligned_cols=197  Identities=25%  Similarity=0.408  Sum_probs=160.6

Q ss_pred             cceeccCCceeEEEEEeC---CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe--CCeeEEEEecCC
Q 005236          392 NKKLGEGGFGPVYKGTLA---DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH--GEEKLLIYEFMP  466 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~  466 (706)
                      .++||+|+||.||+|+..   .++.+|+|.+....  ....+.+|+.++++++||||+++++++..  +...++||||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            368999999999999864   45789999986432  23457789999999999999999999864  346789999986


Q ss_pred             CCChhhhhhccc------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE----cCCCCeEEeeeccc
Q 005236          467 NKSLDSFIFDQE------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLA  536 (706)
Q Consensus       467 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill----~~~~~~kl~Dfgla  536 (706)
                      + +|.+++....      ....+++..+..++.||+.||.|||+.+   |+||||||+|||+    +..+.+||+|||++
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence            4 7877774321      2235788899999999999999999988   9999999999999    46678999999999


Q ss_pred             cccCCCCC-cccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 005236          537 RAFGGDET-EGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFY  594 (706)
Q Consensus       537 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~  594 (706)
                      +.+..... ........+|+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            87643322 122334678999999999977 46899999999999999999999998643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.4e-35  Score=328.94  Aligned_cols=264  Identities=20%  Similarity=0.263  Sum_probs=191.6

Q ss_pred             HHHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCC------cceeeeEeEEEe
Q 005236          382 IANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQH------RNLVKLLGCCIH  454 (706)
Q Consensus       382 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~  454 (706)
                      +....++|++.++||+|+||.||+|... .++.||||++.... .....+..|+.++.+++|      ++|+++++++..
T Consensus       124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            3345688999999999999999999975 47789999986432 233456667777777654      458899998876


Q ss_pred             C-CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCC------
Q 005236          455 G-EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDM------  526 (706)
Q Consensus       455 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~------  526 (706)
                      . .+.++|||++ +++|.+++...   ..+++..+..++.||+.||+|||++ +   |+||||||+|||++.++      
T Consensus       203 ~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~  275 (467)
T PTZ00284        203 ETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPV  275 (467)
T ss_pred             CCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccc
Confidence            5 4788999988 77888888543   3588899999999999999999974 6   99999999999998765      


Q ss_pred             ----------CeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCC
Q 005236          527 ----------NPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS  596 (706)
Q Consensus       527 ----------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~  596 (706)
                                .+||+|||++....     .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       276 ~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~  350 (467)
T PTZ00284        276 TNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN  350 (467)
T ss_pred             cccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence                      49999999886422     122346799999999999999999999999999999999999999865433


Q ss_pred             CCchhHHHHHHHH----hhc----CCCccccc------cccc--------C---cCCHHHHHHHHHHHHHhcCCCCCCCC
Q 005236          597 DNKLNLIRHAWKL----WNE----GMPSQLID------ACFK--------D---SFNLAEVIRCIHIGLLCVQQYPEDRP  651 (706)
Q Consensus       597 ~~~~~~~~~~~~~----~~~----~~~~~~~d------~~~~--------~---~~~~~~~~~~~~l~~~cl~~~p~~RP  651 (706)
                      .+....+......    +..    ....++++      +...        .   .........+++|+..||+.||.+||
T Consensus       351 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~  430 (467)
T PTZ00284        351 LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL  430 (467)
T ss_pred             HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence            2222222111000    000    00000000      0000        0   00011123467899999999999999


Q ss_pred             ChhHHHH
Q 005236          652 CMPSVIL  658 (706)
Q Consensus       652 t~~ev~~  658 (706)
                      |++|+++
T Consensus       431 ta~e~L~  437 (467)
T PTZ00284        431 NARQMTT  437 (467)
T ss_pred             CHHHHhc
Confidence            9999986

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-35  Score=298.50  Aligned_cols=254  Identities=22%  Similarity=0.361  Sum_probs=202.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.+.||.|+||.||+|... +++.+++|.+........+.+.+|+.++++++||||+++++++..+...+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            367899999999999999999985 4778999998766555678899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++...  ...++...+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++..+.....
T Consensus        82 ~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  156 (262)
T cd06613          82 CGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA  156 (262)
T ss_pred             CCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence            9999999988653  235788999999999999999999987   99999999999999999999999999986543211


Q ss_pred             cccccccccccCccCccccccC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDG---QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~---~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                        ......++..|+|||.+...   .++.++||||||+++|||++|+.|+.......   ....   ..........   
T Consensus       157 --~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~---~~~~---~~~~~~~~~~---  225 (262)
T cd06613         157 --KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR---ALFL---ISKSNFPPPK---  225 (262)
T ss_pred             --ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHH---HHhccCCCcc---
Confidence              12234678899999999776   88999999999999999999999975433211   1111   1111000000   


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       +.  ........+.+++.+||+.+|.+|||+++|+.
T Consensus       226 -~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         226 -LK--DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             -cc--chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence             00  01112235678999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.3e-34  Score=295.51  Aligned_cols=250  Identities=25%  Similarity=0.358  Sum_probs=198.4

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-CeeEEEEe
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-EEKLLIYE  463 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e  463 (706)
                      +|++.+.||+|++|.||+++.. +++.+|+|++...  .....+.+.+|+.++++++|||++++++.+... ...++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            5889999999999999999975 4778999998542  334556789999999999999999999887644 46789999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++.... ...+++.++..++.+++.||++||+.+   ++|+||||+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~  156 (257)
T cd08223          81 FCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC  156 (257)
T ss_pred             ccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence            999999999996532 345899999999999999999999988   9999999999999999999999999998764322


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      .  ......+++.|+|||++.+..++.++||||||++++||++|+.|+.....   ....   .... .+....+     
T Consensus       157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~---~~~~---~~~~-~~~~~~~-----  222 (257)
T cd08223         157 D--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM---NSLV---YRII-EGKLPPM-----  222 (257)
T ss_pred             C--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH---HHHH---HHHH-hcCCCCC-----
Confidence            1  22235678999999999999999999999999999999999998753221   1111   1111 1111111     


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..    .....+.+++.+|++.+|++||++.++++.
T Consensus       223 ~~----~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         223 PK----DYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             cc----ccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            01    112356689999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=5.9e-35  Score=309.78  Aligned_cols=201  Identities=22%  Similarity=0.332  Sum_probs=171.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||.||+++.+. ++.+|+|.+.+.   .....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            478999999999999999999865 678999998642   2223455888999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++.+..  ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+...
T Consensus        81 ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~  155 (332)
T cd05623          81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED  155 (332)
T ss_pred             eccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence            9999999999996532  34788889999999999999999988   999999999999999999999999999765322


Q ss_pred             CCcccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 005236          543 ETEGNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~  593 (706)
                      .. .......||+.|+|||++.     ...++.++|||||||++|||++|+.||..
T Consensus       156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~  210 (332)
T cd05623         156 GT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (332)
T ss_pred             Cc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence            21 1223357999999999986     34688999999999999999999999853

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=7.2e-35  Score=299.86  Aligned_cols=254  Identities=24%  Similarity=0.374  Sum_probs=199.9

Q ss_pred             cCCCccceeccCCceeEEEEEeCC----CcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|.+.++||+|+||.||+|...+    ...|+||...... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            568888999999999999998743    2468999886544 4556789999999999999999999998865 557899


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++....  ..+++..++.++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++....
T Consensus        85 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056          85 MELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             EEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence            99999999999996532  34789999999999999999999987   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      .... ......++..|+|||.+....++.++||||||+++|||++ |+.||......   ......    ......... 
T Consensus       160 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~~----~~~~~~~~~-  230 (270)
T cd05056         160 ESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN---DVIGRI----ENGERLPMP-  230 (270)
T ss_pred             ccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHH----HcCCcCCCC-
Confidence            3221 1122334568999999988899999999999999999996 99997543221   111111    111111110 


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                          ...    ...+.+++.+|+..+|.+|||+.++++.|+.+
T Consensus       231 ----~~~----~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~  265 (270)
T cd05056         231 ----PNC----PPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI  265 (270)
T ss_pred             ----CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                111    12466788999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=2.5e-35  Score=304.48  Aligned_cols=247  Identities=26%  Similarity=0.424  Sum_probs=198.3

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .|+..+.||+|+||.||+|.+. +++.||+|.+... .....+.+.+|+.++++++||||+++++++..+...++||||+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            4667789999999999999875 4778999988643 2344568899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++..    ..+++..+..++.|+++||.|||+.+   ++|+||+|+||++++++.++|+|||++..+....  
T Consensus        85 ~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--  155 (277)
T cd06642          85 GGGSALDLLKP----GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--  155 (277)
T ss_pred             CCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc--
Confidence            99999998843    34788999999999999999999887   9999999999999999999999999998754322  


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      .......++..|+|||++.+..++.++||||||+++|||++|+.|+........   ..    .........     +. 
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~---~~----~~~~~~~~~-----~~-  222 (277)
T cd06642         156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV---LF----LIPKNSPPT-----LE-  222 (277)
T ss_pred             hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH---Hh----hhhcCCCCC-----CC-
Confidence            112234578899999999999999999999999999999999999753322111   10    011111111     11 


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                         ......+.+++.+||+.+|.+||+|.+|++.
T Consensus       223 ---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         223 ---GQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             ---cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence               1122356688999999999999999999974

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-35  Score=305.59  Aligned_cols=255  Identities=28%  Similarity=0.376  Sum_probs=203.5

Q ss_pred             hccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV  461 (706)
                      ....|++.++||+||.+.||++...+.+.+|+|++..  .+.+....+.+|+.+|.+|+ |.+||+|++|-..++.+|||
T Consensus       359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv  438 (677)
T KOG0596|consen  359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV  438 (677)
T ss_pred             CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence            3467999999999999999999998888999998743  56777899999999999996 99999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||= ..+|..+|..... ....| .+..+..||+.++.++|.++   |||.||||.|+|+- .|.+||+|||+|..+..
T Consensus       439 mE~G-d~DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~  511 (677)
T KOG0596|consen  439 MECG-DIDLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFGIANAIQP  511 (677)
T ss_pred             eecc-cccHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeechhcccCc
Confidence            9974 6699999965432 23334 66778899999999999998   99999999999984 57899999999999988


Q ss_pred             CCCcccccccccccCccCccccccC-----------CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDG-----------QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      +.........+||+.||+||.+...           ..+.++||||+|||||+|+.|+.||..+.     ..+.......
T Consensus       512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-----n~~aKl~aI~  586 (677)
T KOG0596|consen  512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-----NQIAKLHAIT  586 (677)
T ss_pred             cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----HHHHHHHhhc
Confidence            8777777778999999999999643           25689999999999999999999985322     1222222211


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..+.  ++--+.+      ..-.++++++..||+.||.+||++.||++.
T Consensus       587 ~P~~--~Iefp~~------~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  587 DPNH--EIEFPDI------PENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             CCCc--cccccCC------CCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            1111  1111111      111227789999999999999999999875

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.4e-34  Score=295.24  Aligned_cols=251  Identities=35%  Similarity=0.552  Sum_probs=199.2

Q ss_pred             CCccceeccCCceeEEEEEeCC-----CcEEEEEEcCccchh-hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          389 FSINKKLGEGGFGPVYKGTLAD-----EQEIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      +++.+.||.|+||.||+++..+     +..||+|.+...... ..+.+..|+.++..++|+||+++++.+.+.+..+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            4567899999999999999854     378999998654332 5678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++..... ..+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.++|+|||+++.....
T Consensus        81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219       81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence            99999999999965332 22799999999999999999999987   999999999999999999999999999876543


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ...... ...++..|+|||.+....++.++||||+|++++||++ |+.|+....   .........    ......... 
T Consensus       157 ~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~---~~~~~~~~~----~~~~~~~~~-  227 (258)
T smart00219      157 DYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS---NEEVLEYLK----KGYRLPKPE-  227 (258)
T ss_pred             cccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHh----cCCCCCCCC-
Confidence            222211 2347789999999988899999999999999999998 777764321   111111111    111111111 


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                          .    ....+.+++.+|++.+|++|||+.|+++.|
T Consensus       228 ----~----~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      228 ----N----CPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             ----c----CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence                1    123466789999999999999999999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=8.9e-35  Score=296.77  Aligned_cols=248  Identities=27%  Similarity=0.423  Sum_probs=198.7

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-----hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-----EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      +|+..+.||+|+||.||+|... +++.|++|.+....     .+..+.+.+|+.++++++||||+++++++......++|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            4777899999999999999986 68899999875432     33567889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...   ..+++..+..++.||+.||+|||+.+   ++|+||+|+||+++.++.+||+|||++.....
T Consensus        81 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~  154 (258)
T cd06632          81 LELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE  154 (258)
T ss_pred             EEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            9999999999999643   34788999999999999999999988   99999999999999999999999999887543


Q ss_pred             CCCcccccccccccCccCccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ..   ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||.....   ....   ...........+ .
T Consensus       155 ~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~---~~~~---~~~~~~~~~~~~-~  224 (258)
T cd06632         155 FS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG---VAAV---FKIGRSKELPPI-P  224 (258)
T ss_pred             cc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH---HHHH---HHHHhcccCCCc-C
Confidence            22   123356888999999998776 89999999999999999999999754331   1111   111110111111 1


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          ...    ...+.+++.+||+.+|.+||++.++++.
T Consensus       225 ----~~~----~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         225 ----DHL----SDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             ----CCc----CHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence                111    1245678899999999999999999863

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=9.4e-35  Score=303.57  Aligned_cols=261  Identities=26%  Similarity=0.332  Sum_probs=197.7

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch-----hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE-----QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      +|.+.+.||+|+||.||+|... +++.|+||++.....     .....+..|+.++++++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            4778899999999999999975 588999999865332     2345677899999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+ +++|.+++....  ..+++..+..++.||++||.|||+.+   ++|+||+|+||+++.++.+||+|||+++....
T Consensus        81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            9999 999999996543  35899999999999999999999988   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC------
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM------  614 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~------  614 (706)
                      ...  ......++..|+|||.+.+ ..++.++||||||+++|||++|.+++.....   ...............      
T Consensus       155 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  229 (298)
T cd07841         155 PNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD---IDQLGKIFEALGTPTEENWPG  229 (298)
T ss_pred             CCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc---HHHHHHHHHHcCCCchhhhhh
Confidence            221  1222356788999998855 4678999999999999999999777643222   122211111110000      


Q ss_pred             ---CcccccccccCcCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          615 ---PSQLIDACFKDSFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       615 ---~~~~~d~~~~~~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                         ...............     .....+.+++.+||+.+|.+|||++||++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence               000000000001111     112456789999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=6.1e-35  Score=333.20  Aligned_cols=255  Identities=23%  Similarity=0.319  Sum_probs=196.2

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKL  459 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~  459 (706)
                      ..++|.+.++||+|+||.||+++... ++.+|+|.+..  ........+..|+.++++++|||||++++++...  ...+
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence            44789999999999999999999854 66788998754  2344567889999999999999999999988654  4689


Q ss_pred             EEEecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCC----CceEecccCCCcEEEcC----------
Q 005236          460 LIYEFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSR----LRIIHRDLKASNVLLDQ----------  524 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~----~~ivH~Dikp~Nill~~----------  524 (706)
                      +||||+++++|.++|.... ....+++..++.|+.||+.||.|||+.+.    .+||||||||+||||+.          
T Consensus        91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~  170 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA  170 (1021)
T ss_pred             EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence            9999999999999996532 23468999999999999999999998531    24999999999999964          


Q ss_pred             -------CCCeEEeeeccccccCCCCCcccccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Q 005236          525 -------DMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGKKNRGFYH  595 (706)
Q Consensus       525 -------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG~~p~~~~~  595 (706)
                             .+.+||+|||++..+....   ......||+.|+|||++..  ..++.++||||||||||||++|+.||....
T Consensus       171 ~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~  247 (1021)
T PTZ00266        171 QANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN  247 (1021)
T ss_pred             cccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence                   3358999999998753322   1233578999999999864  458899999999999999999999985322


Q ss_pred             CCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          596 SDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .  ...++.    .+.......+      ...    ...+.+|+..||+.+|.+||++.|++.
T Consensus       248 ~--~~qli~----~lk~~p~lpi------~~~----S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        248 N--FSQLIS----ELKRGPDLPI------KGK----SKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             c--HHHHHH----HHhcCCCCCc------CCC----CHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            1  111111    1111110000      001    134667899999999999999999983

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.3e-34  Score=297.72  Aligned_cols=253  Identities=23%  Similarity=0.416  Sum_probs=198.7

Q ss_pred             CCCccceeccCCceeEEEEEeCC--CcEEEEEEcCcc----------chhhHHHHHHHHHHHhh-cCCcceeeeEeEEEe
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD--EQEIAVKRLSKI----------SEQGLKELKNEIILFSK-LQHRNLVKLLGCCIH  454 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~  454 (706)
                      +|++.+.||+|+||.||+|....  ++.+|+|.+...          .......+..|+.++.+ ++||||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47888999999999999999865  678999987432          22334567788888765 799999999999999


Q ss_pred             CCeeEEEEecCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                      .+..++||||+++++|.+++... .....+++..++.++.|++.+|.|||+ .+   ++|+||+|+||++++++.+||+|
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence            99999999999999999988542 223458889999999999999999996 44   99999999999999999999999


Q ss_pred             eccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE  612 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~  612 (706)
                      ||++.......   ......++..|+|||.+.+..++.++||||||+++|||++|+.|+....   .......    ...
T Consensus       158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~---~~~~~~~----~~~  227 (269)
T cd08528         158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN---MLSLATK----IVE  227 (269)
T ss_pred             ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC---HHHHHHH----Hhh
Confidence            99998754332   2234568899999999998889999999999999999999999974321   1111111    111


Q ss_pred             CCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       613 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ......    .....    ...+.+++.+||+.||.+||++.||..+|+
T Consensus       228 ~~~~~~----~~~~~----~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         228 AVYEPL----PEGMY----SEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             ccCCcC----CcccC----CHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            111111    01011    124567888999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.1e-34  Score=297.79  Aligned_cols=257  Identities=26%  Similarity=0.426  Sum_probs=203.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.+.||.|+||.||+|... ++..+++|++... .....+.+.+|+..++.++|+||+++++.+...+..++|||+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            47899999999999999999974 5778999998643 233567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++........+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.++|+|||++..+.....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            999999999976443356889999999999999999999988   99999999999999999999999999987643322


Q ss_pred             c--ccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          545 E--GNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       545 ~--~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      .  .......++..|+|||++... .++.++||||||+++|||++|+.|+.......   ....   .... ....+   
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---~~~~---~~~~-~~~~~---  227 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK---VLML---TLQN-DPPSL---  227 (267)
T ss_pred             ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh---hHHH---HhcC-CCCCc---
Confidence            2  122334688999999998877 78999999999999999999999975432211   1111   1111 11111   


Q ss_pred             cccCcCC-HHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          622 CFKDSFN-LAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       622 ~~~~~~~-~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                        ..... ..-...+.+++..||+.+|++||++++|++
T Consensus       228 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         228 --ETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             --CCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence              00000 011234568899999999999999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1e-34  Score=298.34  Aligned_cols=253  Identities=26%  Similarity=0.440  Sum_probs=199.2

Q ss_pred             CCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc------hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS------EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      +|+..+.||+|+||.||+|.. .+++.+|+|.+....      ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            478889999999999999987 558899999886432      2245788999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-CeEEeeecccccc
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAF  539 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfgla~~~  539 (706)
                      ||||+++++|.+++.+.   ..+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++ .+||+|||++...
T Consensus        81 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~  154 (268)
T cd06630          81 FVEWMAGGSVSHLLSKY---GAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL  154 (268)
T ss_pred             EEeccCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence            99999999999998643   35788999999999999999999988   99999999999998776 5999999999876


Q ss_pred             CCCCCc--ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          540 GGDETE--GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       540 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ......  .......++..|+|||.+.+..++.++||||+|+++|+|++|+.|+...........+   ...........
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~  231 (268)
T cd06630         155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI---FKIASATTAPS  231 (268)
T ss_pred             ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHH---HHHhccCCCCC
Confidence            433211  1122346889999999998889999999999999999999999997543322211111   11111111111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                               ........+.+++.+||+.+|.+||++.|+++
T Consensus       232 ---------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         232 ---------IPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             ---------CchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence                     11112234667889999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4e-35  Score=303.52  Aligned_cols=253  Identities=27%  Similarity=0.412  Sum_probs=201.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.+.||.|+||.||+|... +++.+|+|.+........+.+..|+.++++++||||+++++.+......++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            467999999999999999999985 5789999998766666678899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++....  ..+++..+..++.|++.||.|||+.+   |+|+||+|+||+++.++.++|+|||++....... 
T Consensus        84 ~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-  157 (280)
T cd06611          84 CDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-  157 (280)
T ss_pred             cCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc-
Confidence            99999999986532  35889999999999999999999988   9999999999999999999999999987643221 


Q ss_pred             cccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          545 EGNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                       .......++..|+|||.+.     ...++.++||||||+++|||++|+.|+......   ....   .. .......+.
T Consensus       158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~---~~~~---~~-~~~~~~~~~  229 (280)
T cd06611         158 -QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM---RVLL---KI-LKSEPPTLD  229 (280)
T ss_pred             -cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH---HHHH---HH-hcCCCCCcC
Confidence             1222356889999999985     345778999999999999999999997543221   1111   11 111111110


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+   ...    ...+.+++..||+.+|.+||++.+|++.
T Consensus       230 ~~---~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         230 QP---SKW----SSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             Cc---ccC----CHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            00   001    1245678889999999999999999764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=2.1e-34  Score=295.82  Aligned_cols=250  Identities=27%  Similarity=0.388  Sum_probs=191.9

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-----chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--Cee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-----SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEK  458 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  458 (706)
                      .+|+..+.||+|+||.||+|... .+..|++|++...     .....+.+.+|+.++++++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            36889999999999999999885 4889999987542     223456788999999999999999999998753  567


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      +++|||+++++|.+++...   ..+++...+.++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||+++.
T Consensus        82 ~l~~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAY---GALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            8999999999999999643   34788889999999999999999887   99999999999999999999999999986


Q ss_pred             cCCCCC-cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          539 FGGDET-EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       539 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      +..... ........++..|+|||++.+..++.++||||||+++|||++|+.||.....   ...+.   ..........
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~---~~~~~---~~~~~~~~~~  229 (266)
T cd06651         156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA---MAAIF---KIATQPTNPQ  229 (266)
T ss_pred             cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch---HHHHH---HHhcCCCCCC
Confidence            532211 1112234578899999999998999999999999999999999999753211   11111   1111111111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +     ....+    ..+..++ .||..+|++||+++||++
T Consensus       230 ~-----~~~~~----~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         230 L-----PSHIS----EHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             C-----chhcC----HHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            1     00111    1222343 788899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=7.3e-35  Score=308.51  Aligned_cols=199  Identities=20%  Similarity=0.269  Sum_probs=165.7

Q ss_pred             ccceeccC--CceeEEEEEe-CCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          391 INKKLGEG--GFGPVYKGTL-ADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       391 ~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      +.++||+|  +|++||+++. .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45889999  7899999987 45889999998653  2344567888999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+++.||+.+.........
T Consensus        82 ~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~  157 (327)
T cd08227          82 AYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR  157 (327)
T ss_pred             CCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence            9999999986432 234789999999999999999999988   999999999999999999999999876543211110


Q ss_pred             -----ccccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 005236          546 -----GNTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       546 -----~~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG~~p~~~  593 (706)
                           .......++..|+|||++.+  ..++.++|||||||++|||++|+.||..
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  212 (327)
T cd08227         158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD  212 (327)
T ss_pred             ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence                 01122356778999999976  4689999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=1.6e-34  Score=295.95  Aligned_cols=253  Identities=26%  Similarity=0.361  Sum_probs=205.2

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccch-hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.+.||+|++|.||+++... ++.++||++..... ...+.+.+|+..+.+++|+||+++++++......++||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            468889999999999999999865 88999999876443 4567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      +++++|.+++...   ..+++..++.++.|+++||+|||+ .+   ++|+||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence            9999999999654   458899999999999999999999 77   9999999999999999999999999998764332


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      ..  .....++..|+|||.+....++.++||||||+++|||++|+.|+................    ......+..   
T Consensus       155 ~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~---  225 (264)
T cd06623         155 DQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC----DGPPPSLPA---  225 (264)
T ss_pred             Cc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh----cCCCCCCCc---
Confidence            22  123567899999999999999999999999999999999999976543312222222211    111111100   


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        .   .....+.+++.+||+.+|.+||++.++++.
T Consensus       226 --~---~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         226 --E---EFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             --c---cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence              0   012356678889999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.6e-35  Score=302.39  Aligned_cols=252  Identities=27%  Similarity=0.424  Sum_probs=196.2

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeC------C
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHG------E  456 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------~  456 (706)
                      +.+.|++.+.||+|+||.||+|... .++.||+|.+.... .....+..|+.++.++ +||||+++++++...      .
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            4567899999999999999999885 47789999885433 3346788999999998 699999999998753      4


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      ..++||||+++++|.+++.... ...+++..+..++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||++
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~  158 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS  158 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCc
Confidence            5789999999999999986532 345789999999999999999999987   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      .......  .......|+..|+|||++.     ...++.++|||||||++|||++|+.|+........   .   .....
T Consensus       159 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~---~---~~~~~  230 (272)
T cd06637         159 AQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA---L---FLIPR  230 (272)
T ss_pred             eeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH---H---HHHhc
Confidence            8653221  2223456889999999986     34688899999999999999999999753321111   1   11111


Q ss_pred             cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          612 EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       612 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      . ......+.    ..    ...+.+++.+||+.+|.+|||+.|+++
T Consensus       231 ~-~~~~~~~~----~~----~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         231 N-PAPRLKSK----KW----SKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             C-CCCCCCCC----Cc----CHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            1 11111110    11    124667899999999999999999975

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.8e-35  Score=315.49  Aligned_cols=259  Identities=24%  Similarity=0.332  Sum_probs=194.0

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-----
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-----  455 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----  455 (706)
                      ...++|.+.+.||+|+||.||+|... .++.||||++...  .....+.+.+|+.++++++||||+++++++...     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            34578999999999999999999874 5788999998653  223345678899999999999999999987643     


Q ss_pred             -CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          456 -EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       456 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                       ...++++|++ +++|.+++..    ..+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg  163 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG  163 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCc
Confidence             3568999988 7889887743    34889999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      +++.....     .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......   .............
T Consensus       164 ~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~  235 (343)
T cd07878         164 LARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI---DQLKRIMEVVGTP  235 (343)
T ss_pred             cceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHHHhCCC
Confidence            99865322     223568999999999877 57899999999999999999999997542211   1111111111000


Q ss_pred             CCccccccc-----------cc--CcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 MPSQLIDAC-----------FK--DSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 ~~~~~~d~~-----------~~--~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       ..+.....           +.  ...+..     ....+.+++.+||+.||.+|||++|++..
T Consensus       236 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         236 -SPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             -CHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             00000000           00  000000     01135689999999999999999999864

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=8e-35  Score=303.01  Aligned_cols=263  Identities=28%  Similarity=0.391  Sum_probs=202.5

Q ss_pred             ccHHHHHHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEe
Q 005236          377 FELATIANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIH  454 (706)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  454 (706)
                      +....+..+.++|.+.+.||+|+||.||++... +++.+|+|.+.... .....+.+|+.+++++ +||||+++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            444556667889999999999999999999984 57889999886532 2345678899999999 89999999999875


Q ss_pred             C-----CeeEEEEecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          455 G-----EEKLLIYEFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       455 ~-----~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      .     ...++||||+++++|.+++.... ....+++..++.++.|++.||+|||+.+   ++|+||||+||++++++.+
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~  167 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGV  167 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCE
Confidence            4     35799999999999999886422 2345889999999999999999999987   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-----QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI  603 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~  603 (706)
                      ||+|||+++.+.....  ......++..|+|||.+...     .++.++|||||||++|||++|+.|+......   ..+
T Consensus       168 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~---~~~  242 (291)
T cd06639         168 KLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV---KTL  242 (291)
T ss_pred             EEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH---HHH
Confidence            9999999987543221  12234688999999998643     3689999999999999999999997543221   111


Q ss_pred             HHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          604 RHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       604 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                         .... ......+.++       ......+.+++.+||+.+|++||++.|+++.
T Consensus       243 ---~~~~-~~~~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         243 ---FKIP-RNPPPTLLHP-------EKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             ---HHHh-cCCCCCCCcc-------cccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence               1111 1111111111       0112246789999999999999999999864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=2.3e-35  Score=313.16  Aligned_cols=198  Identities=24%  Similarity=0.343  Sum_probs=170.9

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-C-----cceeeeEeEEEeCCeeEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-H-----RNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l  460 (706)
                      +|.+.+.||+|.||.|.++.+. .++.||||+++. ......+...|+.+|..|+ |     -|+|+++++|...++.+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN-~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN-KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeecc-ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            7899999999999999999985 488999999965 4445667788999999997 4     389999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC--CeEEeeeccccc
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM--NPKISDFGLARA  538 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~--~~kl~Dfgla~~  538 (706)
                      |+|.+ .-+|.++|..+. ...++...+..++.||+.||.+||+.+   |||+||||+||||.+.+  .+||+|||.|..
T Consensus       266 VfELL-~~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~  340 (586)
T KOG0667|consen  266 VFELL-STNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCF  340 (586)
T ss_pred             eehhh-hhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccc
Confidence            99999 569999996544 456899999999999999999999888   99999999999997654  699999999987


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCC
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS  596 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~  596 (706)
                      .....    . ...-+..|.|||+|.+.+|+.+.||||||||+.||++|.+.|.....
T Consensus       341 ~~q~v----y-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne  393 (586)
T KOG0667|consen  341 ESQRV----Y-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE  393 (586)
T ss_pred             cCCcc----e-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence            53221    1 46678899999999999999999999999999999999877654333

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.7e-36  Score=283.56  Aligned_cols=254  Identities=24%  Similarity=0.338  Sum_probs=200.7

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--------chhhHHHHHHHHHHHhhc-CCcceeeeEeEE
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--------SEQGLKELKNEIILFSKL-QHRNLVKLLGCC  452 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  452 (706)
                      ....+.|.-.+.||.|..++|-+...+ .+++.|+|++...        ...-.++-..|+.+++++ -||+|+.+.+++
T Consensus        13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y   92 (411)
T KOG0599|consen   13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY   92 (411)
T ss_pred             hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence            334467888899999999999988774 5788999987431        122245567899999998 599999999999


Q ss_pred             EeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       453 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                      +.....++|+|.|+.|.|.++|...   -.+++++..+|+.|+.+|++|||..+   ||||||||+|||++++.++||+|
T Consensus        93 es~sF~FlVFdl~prGELFDyLts~---VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isD  166 (411)
T KOG0599|consen   93 ESDAFVFLVFDLMPRGELFDYLTSK---VTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISD  166 (411)
T ss_pred             cCcchhhhhhhhcccchHHHHhhhh---eeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEec
Confidence            9999999999999999999999543   45889999999999999999999988   99999999999999999999999


Q ss_pred             eccccccCCCCCcccccccccccCccCcccccc------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHH
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASD------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA  606 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~  606 (706)
                      ||++..+....   .....+|||+|+|||.+..      ..|+...|+||.|||+|.|+.|.+||-  +....     ..
T Consensus       167 FGFa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw--HRkQm-----lM  236 (411)
T KOG0599|consen  167 FGFACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW--HRKQM-----LM  236 (411)
T ss_pred             cceeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh--HHHHH-----HH
Confidence            99999875433   3445799999999999853      468889999999999999999999963  21110     11


Q ss_pred             HHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       607 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .+++.++.. ++..+.+.+     -...+.+++.+||+.||.+|.|.+|+++
T Consensus       237 LR~ImeGky-qF~speWad-----is~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  237 LRMIMEGKY-QFRSPEWAD-----ISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             HHHHHhccc-ccCCcchhh-----ccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            122223222 122222211     1224568999999999999999999975

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=9.9e-35  Score=301.48  Aligned_cols=261  Identities=25%  Similarity=0.377  Sum_probs=199.8

Q ss_pred             HHHHHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEE----
Q 005236          380 ATIANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCI----  453 (706)
Q Consensus       380 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~----  453 (706)
                      ..+..+.++|++.+.||+|+||.||+++.. .++.+|+|.+.... .....+.+|+.+++++ +||||+++++++.    
T Consensus        11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   89 (286)
T cd06638          11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV   89 (286)
T ss_pred             ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence            445567789999999999999999999884 47889999876432 2235688899999999 6999999999885    


Q ss_pred             -eCCeeEEEEecCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEe
Q 005236          454 -HGEEKLLIYEFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS  531 (706)
Q Consensus       454 -~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~  531 (706)
                       .++..++||||+++++|.+++... .....+++..+..++.|+++||.|||+.+   ++||||||+||++++++.+||+
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl~  166 (286)
T cd06638          90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKLV  166 (286)
T ss_pred             CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEEc
Confidence             345689999999999999988643 22345788889999999999999999987   9999999999999999999999


Q ss_pred             eeccccccCCCCCcccccccccccCccCcccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHH
Q 005236          532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD-----GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA  606 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~  606 (706)
                      |||+++......  .......|+..|+|||++..     ..++.++|||||||++|||++|+.|+......   ....  
T Consensus       167 dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~---~~~~--  239 (286)
T cd06638         167 DFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM---RALF--  239 (286)
T ss_pred             cCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh---HHHh--
Confidence            999998753221  12233468999999999853     45788999999999999999999997543221   1110  


Q ss_pred             HHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       607 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                       .. .......+.++.   ..    ...+.+++.+||+.+|.+|||+.||++.+
T Consensus       240 -~~-~~~~~~~~~~~~---~~----~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         240 -KI-PRNPPPTLHQPE---LW----SNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             -hc-cccCCCcccCCC---Cc----CHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence             10 011111111110   01    12466789999999999999999998753

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-36  Score=316.32  Aligned_cols=252  Identities=27%  Similarity=0.381  Sum_probs=203.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCC--Cc--EEEEEEcCccchh-hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD--EQ--EIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++.++.++||+|.||+|++|.|..  |+  .||||.+...... ....|.+|+.+|.+|+|||+++|||+..+ ....||
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV  188 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV  188 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence            345667899999999999999853  44  5899999765443 67899999999999999999999999887 788999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      ||.++.|+|.+.|++ .....+-...+..++.|||.||.||.++.   +|||||..+|+||-..-.+||+||||.+.++.
T Consensus       189 ~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~  264 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGE  264 (1039)
T ss_pred             hhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCC
Confidence            999999999999987 33455778888999999999999999987   99999999999999999999999999998865


Q ss_pred             CCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          542 DETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       542 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      .+.. .......-...|.|||.+....++.++|||+|||+||||+| |+.||.....-..+..++.      .+.     
T Consensus       265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~------~er-----  333 (1039)
T KOG0199|consen  265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA------GER-----  333 (1039)
T ss_pred             CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc------ccc-----
Confidence            4433 33334456788999999999999999999999999999999 6777654333222222211      000     


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                         +  .-...+.+++.+++..||..+|++|||+..|.+.
T Consensus       334 ---L--pRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  334 ---L--PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             ---C--CCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence               1  1112244567889999999999999999999733

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.8e-34  Score=298.07  Aligned_cols=248  Identities=26%  Similarity=0.422  Sum_probs=200.4

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ..|+..+.||+|+||.||+|... .++.||+|.+... .....+.+.+|+.++++++||||+++++++.++...++||||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            35777899999999999999985 4788999988643 344567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++..    ..+++..+..++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++..+.....
T Consensus        84 ~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          84 LGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence            999999999853    34788888999999999999999887   99999999999999999999999999987643221


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        ......++..|+|||++.+..++.++||||||+++|||++|+.|+..........       ........        
T Consensus       157 --~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-------~~~~~~~~--------  219 (277)
T cd06640         157 --KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-------LIPKNNPP--------  219 (277)
T ss_pred             --ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-------hhhcCCCC--------
Confidence              2223457889999999998899999999999999999999999975432211110       00111111        


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       .........+.+++..||+.+|.+||+++++++.
T Consensus       220 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         220 -TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             -CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence             1111233456789999999999999999999765

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-36  Score=309.60  Aligned_cols=253  Identities=25%  Similarity=0.404  Sum_probs=204.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCC---C--cEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD---E--QEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~---~--~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      +..++.++||.|-||.||+|...+   |  -.||||..+. ......+.|..|..+|++++||||++|+|+|.+ ...++
T Consensus       389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi  467 (974)
T KOG4257|consen  389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI  467 (974)
T ss_pred             hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence            445666899999999999998633   2  3589999876 455668899999999999999999999999965 56899


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |||.++-|-|.+||..+.  ..++......++.||+.||.|||+..   +|||||..+||||.....+||+|||+++.+.
T Consensus       468 vmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e  542 (974)
T KOG4257|consen  468 VMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLE  542 (974)
T ss_pred             EEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhcc
Confidence            999999999999996543  45888889999999999999999987   9999999999999999999999999999986


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      .+...... ...-++.|||||.+.-..+|.+||||-|||.+||+++ |.+||......+-.-.+       ..+....  
T Consensus       543 d~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i-------EnGeRlP--  612 (974)
T KOG4257|consen  543 DDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI-------ENGERLP--  612 (974)
T ss_pred             ccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe-------cCCCCCC--
Confidence            55544333 4567889999999999999999999999999999987 89998654433221111       1111111  


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                             .+..+.-.+..++.+||+++|.+||.+.|+...|..
T Consensus       613 -------~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsd  648 (974)
T KOG4257|consen  613 -------CPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSD  648 (974)
T ss_pred             -------CCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHH
Confidence                   111223356678999999999999999998876643

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.4e-34  Score=294.99  Aligned_cols=247  Identities=28%  Similarity=0.439  Sum_probs=195.8

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.+.||+|+||.||++.. .++.+|+|.+....  ..+.+.+|+.++++++||||+++++++.. +..++||||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCC
Confidence            5688999999999999999975 57789999986432  24678899999999999999999999865 45799999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++.... ...+++..++.++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++.....    
T Consensus        82 ~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----  153 (254)
T cd05083          82 KGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----  153 (254)
T ss_pred             CCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc----
Confidence            999999996543 235788999999999999999999887   999999999999999999999999998764221    


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                       ......+..|+|||.+.+..++.++||||||+++|||++ |+.||.....   ......    ..........     .
T Consensus       154 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~----~~~~~~~~~~-----~  220 (254)
T cd05083         154 -VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL---KEVKEC----VEKGYRMEPP-----E  220 (254)
T ss_pred             -CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH---HHHHHH----HhCCCCCCCC-----C
Confidence             112234568999999998899999999999999999998 8888753322   111111    1111111111     1


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ..    ...+.+++.+||+.+|.+||++++|++.|+.
T Consensus       221 ~~----~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         221 GC----PADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             cC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            11    2345678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=3.6e-35  Score=305.66  Aligned_cols=249  Identities=25%  Similarity=0.407  Sum_probs=197.8

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      .|.....||+|+||.||++... ++..||||++........+.+.+|+.+++.++||||+++++.+..++..++||||++
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~  102 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE  102 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence            3444578999999999999874 578999999876555566788999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++..    ..+++..+..++.||+.||.|||+.+   |+||||||+||++++++.++|+|||++........  
T Consensus       103 ~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--  173 (292)
T cd06658         103 GGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--  173 (292)
T ss_pred             CCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--
Confidence            9999998843    24788999999999999999999987   99999999999999999999999999876532221  


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                      ......++..|+|||.+.+..++.++||||||+++|||++|+.|+.....   ........    ......+     ...
T Consensus       174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~~~----~~~~~~~-----~~~  241 (292)
T cd06658         174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP---LQAMRRIR----DNLPPRV-----KDS  241 (292)
T ss_pred             cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHH----hcCCCcc-----ccc
Confidence            22235688999999999988999999999999999999999999753221   11111111    1111111     111


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..  ....+.+++..|++.+|.+|||++|+++.
T Consensus       242 ~~--~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         242 HK--VSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             cc--cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            11  11245578889999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=2.6e-35  Score=305.86  Aligned_cols=262  Identities=24%  Similarity=0.346  Sum_probs=197.8

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.++||+|+||.||+|..+ .++.||+|++....  ....+.+.+|+.+++.++||||+++++++..+...++|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46888999999999999999986 48899999875422  2235678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|..+....   ..+++..+..++.||+.||+|||+.+   ++|+||+|+||++++++.++|+|||++..+....
T Consensus        81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07846          81 FVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  154 (286)
T ss_pred             cCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence            99999998877432   23789999999999999999999987   9999999999999999999999999998754322


Q ss_pred             CcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC--CCccc--
Q 005236          544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG--MPSQL--  618 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--  618 (706)
                      .  ......++..|+|||++.+ ..++.++||||||+++|||++|++|+.....   .............-  .....  
T Consensus       155 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  229 (286)
T cd07846         155 E--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD---IDQLYHIIKCLGNLIPRHQEIFQ  229 (286)
T ss_pred             c--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch---HHHHHHHHHHhCCCchhhHHHhc
Confidence            1  2223457889999999875 4578899999999999999999988753221   11111111110000  00000  


Q ss_pred             ----c----cccccCcCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          619 ----I----DACFKDSFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       619 ----~----d~~~~~~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          .    .+........     .....+.+++.+||+.+|.+||+++++++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         230 KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence                0    0000000000     112357789999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=2.6e-34  Score=303.09  Aligned_cols=196  Identities=27%  Similarity=0.420  Sum_probs=159.7

Q ss_pred             ceeccCCceeEEEEEeCC---CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe--CCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD---EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH--GEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~~  467 (706)
                      .+||+|+||.||+|+..+   +..||+|.+....  ....+.+|+.++++++||||+++++++..  +...++||||+++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            689999999999999753   5689999886532  23467889999999999999999999864  4577899999875


Q ss_pred             CChhhhhhcc------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE----cCCCCeEEeeecccc
Q 005236          468 KSLDSFIFDQ------ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLAR  537 (706)
Q Consensus       468 gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill----~~~~~~kl~Dfgla~  537 (706)
                       +|.+++...      .....+++..+..++.||+.||.|||+.+   |+||||||+|||+    +.++.+||+|||+++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence             777776422      12235788889999999999999999988   9999999999999    566799999999998


Q ss_pred             ccCCCCCc-ccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 005236          538 AFGGDETE-GNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFY  594 (706)
Q Consensus       538 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~  594 (706)
                      .+...... .......+|+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            76433221 12234578999999999876 45899999999999999999999998643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-35  Score=312.66  Aligned_cols=240  Identities=23%  Similarity=0.267  Sum_probs=182.5

Q ss_pred             eccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhc---CCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          395 LGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKL---QHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       395 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      ||+|+||.||+|+.. .++.||||++....   ......+..|..++...   +||||++++..+.+....++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999985 48899999986422   22233445566666655   699999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......  ..
T Consensus        81 g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~  152 (330)
T cd05586          81 GELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KT  152 (330)
T ss_pred             ChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CC
Confidence            9999988543   34788999999999999999999988   9999999999999999999999999997642221  12


Q ss_pred             ccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          548 TNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                      .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.....   ....    ..+..+.. .+..    ..
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~---~~~~----~~i~~~~~-~~~~----~~  220 (330)
T cd05586         153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT---QQMY----RNIAFGKV-RFPK----NV  220 (330)
T ss_pred             ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH---HHHH----HHHHcCCC-CCCC----cc
Confidence            2345799999999998764 589999999999999999999999753221   1111    11111111 0100    01


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCC----hhHHHH
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPC----MPSVIL  658 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt----~~ev~~  658 (706)
                      .    ...+.+++.+||+.+|.+||+    +.++++
T Consensus       221 ~----~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         221 L----SDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             C----CHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            1    123457889999999999995    555544

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-35  Score=303.35  Aligned_cols=263  Identities=23%  Similarity=0.321  Sum_probs=196.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch-hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.+.||+|++|.||+|+.+ +++.||||.+..... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            367999999999999999999985 578999999864322 223456789999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++ +|.+++....  ..+++..+..++.|+++||.|||+.+   ++||||||+||++++++.+||+|||+++......
T Consensus        84 ~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  157 (291)
T cd07844          84 YLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS  157 (291)
T ss_pred             cCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence            9985 8999886543  35788999999999999999999987   9999999999999999999999999987643211


Q ss_pred             CcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC---ccc-
Q 005236          544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP---SQL-  618 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-  618 (706)
                      .  ......++..|+|||++.+ ..++.++||||+|+++|||++|+.||.....  .................   ... 
T Consensus       158 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  233 (291)
T cd07844         158 K--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTD--VEDQLHKIFRVLGTPTEETWPGVS  233 (291)
T ss_pred             c--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHhcCCCChhhhhhhh
Confidence            1  1112346789999999875 4688999999999999999999999753321  11111111111111000   000 


Q ss_pred             -----c--------cccccC-cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          619 -----I--------DACFKD-SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       619 -----~--------d~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                           .        ...+.. .........+.+++..||+.+|.+|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                 0        000000 001111245668999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.1e-34  Score=298.81  Aligned_cols=255  Identities=25%  Similarity=0.381  Sum_probs=196.9

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc----------hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS----------EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE  456 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  456 (706)
                      +|.+.+.||+|+||.||+|... +++.+|+|.+....          ....+.+..|+.+++.++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            4778899999999999999874 58899999875311          112356888999999999999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      ..++||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   ++|+||+|+||++++++.++|+|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~  155 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS  155 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence            999999999999999999654   35788889999999999999999987   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCccccccCC--CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQ--FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      +...............++..|+|||.+....  ++.++||||||+++|||++|..|+....   ...   ..........
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~---~~~---~~~~~~~~~~  229 (272)
T cd06629         156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE---AIA---AMFKLGNKRS  229 (272)
T ss_pred             ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc---hHH---HHHHhhcccc
Confidence            8653322222233456889999999987654  8899999999999999999999974211   111   1111111111


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ...+ .....    ......+.+++..||+.+|.+||++.+|++.
T Consensus       230 ~~~~-~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         230 APPI-PPDVS----MNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             CCcC-Ccccc----ccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            1111 11110    1112356678899999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.4e-34  Score=293.47  Aligned_cols=250  Identities=23%  Similarity=0.342  Sum_probs=199.9

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|++.+.||+|+||.||+++.. +++.+++|++...  .....+++.+|+.++++++||||+++++++...+..++||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            4888999999999999999874 5789999998642  344456889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++.... ...+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++........
T Consensus        81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~  156 (256)
T cd08218          81 CEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE  156 (256)
T ss_pred             CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence            99999999886432 234788899999999999999999987   99999999999999999999999999987533211


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        ......|++.|+|||++.+..++.++||||||+++++|++|+.|+...   +......   ..... ......     
T Consensus       157 --~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~---~~~~~~~---~~~~~-~~~~~~-----  222 (256)
T cd08218         157 --LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG---NMKNLVL---KIIRG-SYPPVS-----  222 (256)
T ss_pred             --hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC---CHHHHHH---HHhcC-CCCCCc-----
Confidence              122345788999999999889999999999999999999999997532   1111111   11111 111110     


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          ......+.+++.+||+.+|.+||+|.+|++.
T Consensus       223 ----~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         223 ----SHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             ----ccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence                0112246678999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.5e-34  Score=298.40  Aligned_cols=262  Identities=24%  Similarity=0.332  Sum_probs=200.3

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|++.+.||+|+||.||+|+.. +++.|++|++....  ....+.+.+|+.++++++||||+++++++..+...++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4788899999999999999984 58899999986533  33456889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      + +++|.+++....  ..+++..++.++.||++||+|||+.+   ++|+||||+||++++++.++|+|||++........
T Consensus        81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~  154 (286)
T cd07832          81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP  154 (286)
T ss_pred             c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence            9 999999986543  55899999999999999999999987   99999999999999999999999999987643321


Q ss_pred             cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC---c---c
Q 005236          545 EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP---S---Q  617 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~---~  617 (706)
                       .......++..|+|||.+.+. .++.++||||+|+++|||++|++++....   .................   .   +
T Consensus       155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07832         155 -RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN---DIEQLAIVFRTLGTPNEETWPGLTS  230 (286)
T ss_pred             -CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC---HHHHHHHHHHHcCCCChHHHhhccC
Confidence             112235688999999998654 46899999999999999999977764322   22222222221111100   0   0


Q ss_pred             ccc--c---cccCcCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          618 LID--A---CFKDSFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       618 ~~d--~---~~~~~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      +.+  .   ........     .....+.+++.+||+.+|++||++++++..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000  0   00000000     112567789999999999999999999864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=2.6e-34  Score=294.38  Aligned_cols=254  Identities=24%  Similarity=0.383  Sum_probs=199.7

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe--CCeeEEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH--GEEKLLIY  462 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~  462 (706)
                      +|++.+.||.|+||.||++... +++.+|+|.+..  ......+.+..|+.++++++||||+++++++..  +...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            4788899999999999999874 578899998864  334456778899999999999999999998764  34678999


Q ss_pred             ecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          463 EFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDS--RLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      ||+++++|.+++.... ....+++..++.++.||+.||.|||..+  ...++|+||+|+||++++++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            9999999999996532 2356889999999999999999999322  223999999999999999999999999999876


Q ss_pred             CCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ......  .....++..|+|||.+....++.++||||||+++|+|++|+.|+....   ......    .........+.
T Consensus       161 ~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~----~~~~~~~~~~~  231 (265)
T cd08217         161 GHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN---QLQLAS----KIKEGKFRRIP  231 (265)
T ss_pred             cCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC---HHHHHH----HHhcCCCCCCc
Confidence            433221  223468999999999999899999999999999999999999976433   111111    11122211111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                               ......+.+++.+||+.+|.+||++++|+++
T Consensus       232 ---------~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         232 ---------YRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             ---------cccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence                     1112356789999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-35  Score=306.59  Aligned_cols=243  Identities=28%  Similarity=0.427  Sum_probs=194.5

Q ss_pred             CCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          388 NFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      -|.-++.||.|+||-||-+++ .+.+.||||+++-.   +...++.+.+|+..|++++|||++.+.|+|..+...+||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            355668999999999999998 45778999998643   44456789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      ||- |+-.+++.-+  .+++.+.++..|..+.+.||+|||+++   .||||||+.|||+.+.|.+||+|||.|....   
T Consensus       107 YCl-GSAsDlleVh--kKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~---  177 (948)
T KOG0577|consen  107 YCL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMA---  177 (948)
T ss_pred             HHh-ccHHHHHHHH--hccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcC---
Confidence            994 5666666432  256788888899999999999999998   9999999999999999999999999997643   


Q ss_pred             CcccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                         ..+.++|||.|||||+|.   .+.|+-|+||||||++..||...++|.-...   .......    +.....+-+-.
T Consensus       178 ---PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN---AMSALYH----IAQNesPtLqs  247 (948)
T KOG0577|consen  178 ---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN---AMSALYH----IAQNESPTLQS  247 (948)
T ss_pred             ---chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch---HHHHHHH----HHhcCCCCCCC
Confidence               344579999999999985   4689999999999999999999999853222   1111111    11122222211


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                              .+-...+..++-.||+.-|.+|||.++++
T Consensus       248 --------~eWS~~F~~Fvd~CLqKipqeRptse~ll  276 (948)
T KOG0577|consen  248 --------NEWSDYFRNFVDSCLQKIPQERPTSEELL  276 (948)
T ss_pred             --------chhHHHHHHHHHHHHhhCcccCCcHHHHh
Confidence                    22334567889999999999999998876

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-37  Score=292.69  Aligned_cols=249  Identities=27%  Similarity=0.410  Sum_probs=205.6

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      -|.++++||+|+||.|||+.++ .|+.+|||++..  ..+++++.+|+.++++.+.|++|++||.+.....+++|||||.
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG  111 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG  111 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence            4667799999999999999985 489999999854  4467899999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      -|+..+.++..  .+++++.++..++...++||+|||...   -||||||+.|||++-+|++||+|||.|-.+.  ....
T Consensus       112 AGSiSDI~R~R--~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLT--DTMA  184 (502)
T KOG0574|consen  112 AGSISDIMRAR--RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLT--DTMA  184 (502)
T ss_pred             CCcHHHHHHHh--cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhh--hhHH
Confidence            99999999643  467999999999999999999999876   7999999999999999999999999997653  2233


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                      ..+...||+.|||||++..-.|..++||||||+...||..|++|+...++-.....+       .-..++.+..      
T Consensus       185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI-------PT~PPPTF~K------  251 (502)
T KOG0574|consen  185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI-------PTKPPPTFKK------  251 (502)
T ss_pred             hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec-------cCCCCCCCCC------
Confidence            445688999999999999999999999999999999999999998776654322211       1111111111      


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       ..+-...+-+++..||-.+|++|.|+-++++.
T Consensus       252 -PE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  252 -PEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             -hHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence             11122355678999999999999998887653

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=2.8e-34  Score=294.63  Aligned_cols=251  Identities=25%  Similarity=0.366  Sum_probs=194.8

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc-----chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--Cee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI-----SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEK  458 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  458 (706)
                      ++|++.+.||+|+||.||+|...+ +..|+||.+...     .....+.+.+|+.++++++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            478999999999999999999854 889999987532     223456788999999999999999999998764  467


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++++|.+++...   ..+++...++++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence            8999999999999998643   34788888999999999999999988   99999999999999999999999999986


Q ss_pred             cCCCCC-cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          539 FGGDET-EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       539 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ...... ........++..|+|||.+.+..++.++||||||+++|||++|+.||.....   ...+   .......... 
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~---~~~~~~~~~~-  228 (265)
T cd06652         156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA---MAAI---FKIATQPTNP-  228 (265)
T ss_pred             cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch---HHHH---HHHhcCCCCC-
Confidence            532211 1122234588899999999988899999999999999999999999753211   1111   1111111100 


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                              .........+.+++..|+. +|.+||+++||++.
T Consensus       229 --------~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         229 --------VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             --------CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence                    1111222355677888885 89999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.6e-34  Score=297.51  Aligned_cols=259  Identities=25%  Similarity=0.295  Sum_probs=200.2

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~  462 (706)
                      ++|+..+.||.|++|.||++... .++.+|+|.+... .......+.+|++++++++||||+++++++.+.  ...++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            46888899999999999999985 4788999988653 334567789999999999999999999998654  3689999


Q ss_pred             ecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          463 EFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      ||+++++|.+++.... ....++...+..++.||+.||.|||+.+   ++|+||+|+||++++++.++|+|||++.....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence            9999999999875422 2345788899999999999999999988   99999999999999999999999999876432


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCC--CCchhHHHHHHHHhhcCCCcccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS--DNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ..    .....++..|+|||.+.+..++.++||||||+++|||++|+.|+.....  ....+...+..    ......+.
T Consensus       158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~  229 (287)
T cd06621         158 SL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV----NMPNPELK  229 (287)
T ss_pred             cc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh----cCCchhhc
Confidence            11    1234578899999999999999999999999999999999999865422  11122222111    11111111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      +. ....  ..-...+.+++.+||+.+|.+|||+.||++.
T Consensus       230 ~~-~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~  266 (287)
T cd06621         230 DE-PGNG--IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH  266 (287)
T ss_pred             cC-CCCC--CchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            11 1100  1112356789999999999999999999873

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.7e-34  Score=302.62  Aligned_cols=257  Identities=20%  Similarity=0.211  Sum_probs=199.8

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||++.... ++.|++|.+....   ....+.+.+|+.+++.++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            468899999999999999999854 7889999886532   233567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++...   ..+++..+..++.|++.||.|||+.+   ++||||||+||++++++.+||+|||+++.....
T Consensus        81 e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~  154 (305)
T cd05609          81 EYVEGGDCATLLKNI---GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS  154 (305)
T ss_pred             ecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence            999999999999543   34788899999999999999999987   999999999999999999999999998742110


Q ss_pred             CC-------------cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHH
Q 005236          543 ET-------------EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL  609 (706)
Q Consensus       543 ~~-------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  609 (706)
                      ..             ........++..|+|||.+.+..++.++||||||+++|||++|+.||....   .......    
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~---~~~~~~~----  227 (305)
T cd05609         155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT---PEELFGQ----  227 (305)
T ss_pred             ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH----
Confidence            00             001112457889999999998899999999999999999999999975321   1111111    


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .......   .+.....    ....+.+++.+||+.+|++||+..++.+.|+..
T Consensus       228 ~~~~~~~---~~~~~~~----~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~  274 (305)
T cd05609         228 VISDDIE---WPEGDEA----LPADAQDLISRLLRQNPLERLGTGGAFEVKQHR  274 (305)
T ss_pred             HHhcccC---CCCcccc----CCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence            1111100   0000001    112356789999999999999988888888764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=9.8e-35  Score=301.71  Aligned_cols=266  Identities=21%  Similarity=0.304  Sum_probs=200.0

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.+.||+|+||.||+|... +++.|++|++...  .....+.+.+|+.++++++|+||+++++++..++..++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            36889999999999999999986 4789999988642  23345788999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |++++.|..++...   ..+++..+..++.||+.||.|||+.+   ++|+||+|+||++++++.+||+|||++.......
T Consensus        81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~  154 (288)
T cd07833          81 YVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARP  154 (288)
T ss_pred             cCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence            99998777665332   34789999999999999999999987   9999999999999999999999999998764432


Q ss_pred             CcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc---------C
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE---------G  613 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---------~  613 (706)
                      . .......++..|+|||++.+. .++.++||||||+++|+|++|+.|+......+....+.........         .
T Consensus       155 ~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07833         155 A-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP  233 (288)
T ss_pred             c-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence            2 122235678899999999888 8899999999999999999999987543221111111110000000         0


Q ss_pred             CCc--cccccc----ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 MPS--QLIDAC----FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 ~~~--~~~d~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ...  +..+..    +...........+.+++..||+.+|++||+++++++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            000  000000    0000000113457789999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=9.9e-35  Score=297.85  Aligned_cols=254  Identities=26%  Similarity=0.361  Sum_probs=201.4

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.+.||+|+||.||++... +++.+++|++... .....+.+.+|+.++++++||||+++++.+......++|+||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            46788899999999999999986 5888999988654 334567789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      +++++|.+++....  ..++...+.+++.|++.||+|||+ .+   ++|+||||+||++++++.++|+|||.+..+....
T Consensus        81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~  155 (265)
T cd06605          81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL  155 (265)
T ss_pred             cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence            99999999996543  567888999999999999999998 76   9999999999999999999999999987653221


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      .    ....++..|+|||.+.+..++.++||||||+++|+|++|+.|+....... ........... ......+...  
T Consensus       156 ~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~--  227 (265)
T cd06605         156 A----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYIV-NEPPPRLPSG--  227 (265)
T ss_pred             h----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHHh-cCCCCCCChh--
Confidence            1    11567889999999999999999999999999999999999975432211 11111111111 1111111110  


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        .    ....+.+++..||..+|.+|||+.+++..
T Consensus       228 --~----~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         228 --K----FSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             --h----cCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence              0    12245678899999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-34  Score=304.24  Aligned_cols=268  Identities=21%  Similarity=0.292  Sum_probs=197.4

Q ss_pred             CCCccceeccCCceeEEEEEeCC---CcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD---EQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKL  459 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~  459 (706)
                      +|.+.++||+|+||.||+|....   ++.||+|.+....   ....+.+.+|+.++.+++||||+++++++.+.  ...+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            47888999999999999999854   7899999987632   33456778899999999999999999999988  7899


Q ss_pred             EEEecCCCCChhhhhhcccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC----CCCeEEeee
Q 005236          460 LIYEFMPNKSLDSFIFDQER--CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ----DMNPKISDF  533 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~----~~~~kl~Df  533 (706)
                      +||||+++ +|.+++.....  ...++...+..++.||+.||.|||+.+   |+||||||+||+++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999975 66666643221  236788999999999999999999988   999999999999999    999999999


Q ss_pred             ccccccCCCCC-cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCch------hHHHH
Q 005236          534 GLARAFGGDET-EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL------NLIRH  605 (706)
Q Consensus       534 gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~------~~~~~  605 (706)
                      |++..+..... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||.........      .....
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER  236 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence            99987643222 1222345678999999988764 5889999999999999999999998654433200      01111


Q ss_pred             HHHHhhcCCC------------cccccccccCc---CCH--------HHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          606 AWKLWNEGMP------------SQLIDACFKDS---FNL--------AEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       606 ~~~~~~~~~~------------~~~~d~~~~~~---~~~--------~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ....+.....            ....+......   ..+        .....+.+++.+||+.+|++|||+.|+++.
T Consensus       237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~  313 (316)
T cd07842         237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH  313 (316)
T ss_pred             HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            1111100000            00000000000   011        112357789999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-34  Score=303.87  Aligned_cols=253  Identities=24%  Similarity=0.267  Sum_probs=198.7

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccch---hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISE---QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||++...+ ++.+|+|.+.....   ...+.+.+|+.+++.++||||+++++.+......++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            468889999999999999999865 88999999865322   24567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+.+++|.+++.... ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++......
T Consensus        81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  156 (316)
T cd05574          81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVE  156 (316)
T ss_pred             EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence            9999999999986432 345888999999999999999999987   999999999999999999999999998765321


Q ss_pred             CCc---------------------------ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Q 005236          543 ETE---------------------------GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYH  595 (706)
Q Consensus       543 ~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~  595 (706)
                      ...                           .......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~  236 (316)
T cd05574         157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN  236 (316)
T ss_pred             ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence            110                           01123467889999999999899999999999999999999999975432


Q ss_pred             CCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC----hhHHHH
Q 005236          596 SDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC----MPSVIL  658 (706)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt----~~ev~~  658 (706)
                      ....   .   .........  .     ....  .....+.+++.+||+.+|++||+    ++|++.
T Consensus       237 ~~~~---~---~~~~~~~~~--~-----~~~~--~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         237 RDET---F---SNILKKEVT--F-----PGSP--PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             hHHH---H---HHHhcCCcc--C-----CCcc--ccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            2111   1   111111100  0     0000  02235667899999999999999    555555

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=9.6e-35  Score=303.20  Aligned_cols=248  Identities=25%  Similarity=0.388  Sum_probs=197.0

Q ss_pred             CCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          389 FSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      |.....||+|+||.||++... +++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~  102 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG  102 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence            334468999999999999875 5889999998654445567788999999999999999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      ++|..++..    ..+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||++..+.....  .
T Consensus       103 ~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~  173 (297)
T cd06659         103 GALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--K  173 (297)
T ss_pred             CCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccccc--c
Confidence            999988743    34789999999999999999999988   99999999999999999999999999876533221  2


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....++..|+|||++.+..++.++||||||+++|||++|+.||.....   ......    ...........  . ...
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~----~~~~~~~~~~~--~-~~~  243 (297)
T cd06659         174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP---VQAMKR----LRDSPPPKLKN--A-HKI  243 (297)
T ss_pred             ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH----HhccCCCCccc--c-CCC
Confidence            2235688999999999988999999999999999999999999753221   111111    11111110000  0 011


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          ...+.+++.+||+.+|.+||++++|++.
T Consensus       244 ----~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         244 ----SPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             ----CHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence                1235678889999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-34  Score=297.09  Aligned_cols=254  Identities=28%  Similarity=0.427  Sum_probs=198.6

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCC------
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGE------  456 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~------  456 (706)
                      ..++|++.+.||+|++|.||+|... +++.+++|.+..... ..+.+.+|+.+++++ +|+||+++++++....      
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            4689999999999999999999985 577899998865443 346789999999999 6999999999997654      


Q ss_pred             eeEEEEecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                      ..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||+
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence            4899999999999999986532 2356889999999999999999999987   99999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccccCccCcccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASD-----GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      +.......  .......++..|+|||++..     ..++.++||||||+++|+|++|+.||......   ....   +..
T Consensus       160 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~---~~~  231 (275)
T cd06608         160 SAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM---RALF---KIP  231 (275)
T ss_pred             ceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH---HHHH---Hhh
Confidence            87653221  12223568899999998754     35778999999999999999999998532211   1111   111


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ......+..       .......+.+++.+||..||++|||+.+|++
T Consensus       232 -~~~~~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         232 -RNPPPTLKS-------PENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             -ccCCCCCCc-------hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence             111111111       1112235668999999999999999999986

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=4.1e-34  Score=293.04  Aligned_cols=252  Identities=27%  Similarity=0.453  Sum_probs=199.4

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch--hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE--QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|.+.+.||+|+||.||+|... +++.+++|.+.....  ...+.+.+|+.++++++|+||+++++.+...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4788899999999999999874 688999999865433  3678899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++...   ..+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++........
T Consensus        81 ~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~  154 (264)
T cd06626          81 CSGGTLEELLEHG---RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT  154 (264)
T ss_pred             CCCCcHHHHHhhc---CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence            9999999998643   34788889999999999999999988   99999999999999999999999999987643322


Q ss_pred             ccc--ccccccccCccCccccccCC---CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          545 EGN--TNRVVGTYGYMAPEYASDGQ---FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       545 ~~~--~~~~~gt~~y~aPE~~~~~~---~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ...  .....++..|+|||++....   ++.++||||||+++|||++|+.||.....  ... ....  .. ......+.
T Consensus       155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~--~~~-~~~~--~~-~~~~~~~~  228 (264)
T cd06626         155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN--EFQ-IMFH--VG-AGHKPPIP  228 (264)
T ss_pred             cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc--hHH-HHHH--Hh-cCCCCCCC
Confidence            111  22356788999999998766   89999999999999999999999854321  111 1111  11 11111111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +     ..  .....+.+++.+||+.+|.+||++.|++.
T Consensus       229 ~-----~~--~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         229 D-----SL--QLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             c-----cc--ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0     00  01223457888999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=7e-34  Score=289.88  Aligned_cols=249  Identities=24%  Similarity=0.402  Sum_probs=198.8

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|++.+.||+|+||.||++... .++.+|||++...  .....+.+.+|+.++++++||||+++++.+..++..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            4788899999999999999874 5788999988543  334567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-CCeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~Dfgla~~~~~~~  543 (706)
                      +++++|.+++.... ...+++..+..++.+++++|+|||+.+   ++|+||+|+||+++++ +.+||+|||++.......
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (256)
T cd08220          81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS  156 (256)
T ss_pred             CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence            99999999996533 345788999999999999999999987   9999999999999865 468999999998764322


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                         ......++..|+|||.+....++.++||||||+++|+|++|+.|+.....   ........    ......+.+   
T Consensus       157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~---  223 (256)
T cd08220         157 ---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---PALVLKIM----SGTFAPISD---  223 (256)
T ss_pred             ---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---HHHHHHHH----hcCCCCCCC---
Confidence               12234678899999999988899999999999999999999999754322   11111111    111111111   


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        ..    ...+.+++.+||+.+|.+|||+.|+++.
T Consensus       224 --~~----~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         224 --RY----SPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             --Cc----CHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence              11    1245678899999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=9.4e-34  Score=288.91  Aligned_cols=252  Identities=28%  Similarity=0.431  Sum_probs=204.0

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeEEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKLLIY  462 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~  462 (706)
                      +|.+.+.||+|++|.||+|... +++.|++|++....  ....+.+.+|+.++++++||||+++++.+...  ...++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4778899999999999999986 68899999986543  35577899999999999999999999999988  8899999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++....   .+++..+..++.|++++|+|||+.+   ++|+||+|+||+++.++.++|+|||.+......
T Consensus        81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            9999999999996543   6899999999999999999999987   999999999999999999999999999876544


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      ..........++..|+|||.+.....+.++||||||+++++|++|+.|+....     .................+.+  
T Consensus       155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~--  227 (260)
T cd06606         155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYKIGSSGEPPEIPE--  227 (260)
T ss_pred             cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHhccccCCCcCCCc--
Confidence            32212334568899999999998889999999999999999999999976543     11111111111111111111  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                             .....+.+++.+|++.+|.+||++.++++.
T Consensus       228 -------~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         228 -------HLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             -------ccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence                   112356678899999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.8e-34  Score=300.18  Aligned_cols=244  Identities=27%  Similarity=0.340  Sum_probs=197.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||++... +++.+|+|.+...   .....+.+.+|+.++++++||||+++++++.++...++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            47889999999999999999985 5889999988642   2234567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++...   ..++...+..++.||+.||.|||+.+   ++|+||+|+||++++++.+||+|||+++.....
T Consensus        81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  154 (290)
T cd05580          81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR  154 (290)
T ss_pred             ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence            999999999998654   45788999999999999999999987   999999999999999999999999999876433


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                           .....+++.|+|||.+.+...+.++||||||+++|+|++|+.|+.....   ......   .. .+.. .+ .  
T Consensus       155 -----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~---~~-~~~~-~~-~--  218 (290)
T cd05580         155 -----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP---IQIYEK---IL-EGKV-RF-P--  218 (290)
T ss_pred             -----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH---Hh-cCCc-cC-C--
Confidence                 2234688999999999888899999999999999999999999753321   111111   11 1111 00 0  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~  658 (706)
                        ...    ...+.+++.+||+.+|.+||     +++|++.
T Consensus       219 --~~~----~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         219 --SFF----SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             --ccC----CHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence              011    12456788999999999999     6666653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.5e-35  Score=309.74  Aligned_cols=245  Identities=24%  Similarity=0.387  Sum_probs=192.6

Q ss_pred             CccceeccCCceeEEEEEeCC-CcEEEEEEc--Cc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe--eEEEE
Q 005236          390 SINKKLGEGGFGPVYKGTLAD-EQEIAVKRL--SK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE--KLLIY  462 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~--~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lV~  462 (706)
                      +..++||+|+|-+||||.+.. |.+||=-.+  ..  ..+...+.|..|+.+|+.|+|||||+++..+.+...  ..+|+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            455899999999999999843 666652211  11  355667899999999999999999999999987665  67899


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-CCCeEEeeeccccccCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgla~~~~~  541 (706)
                      |.|..|+|..|+.+..+   ++.+.+..|+.||++||.|||++. ++|||||||-.||+|+. -|.+||+|+|||.....
T Consensus       123 EL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~  198 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK  198 (632)
T ss_pred             ecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence            99999999999976554   788899999999999999999985 68999999999999985 48999999999998643


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ..    .....|||.|||||... ..|...+||||||+.++||+|+..|+....  .......++.....+.....+-|+
T Consensus       199 s~----aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~--n~AQIYKKV~SGiKP~sl~kV~dP  271 (632)
T KOG0584|consen  199 SH----AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT--NPAQIYKKVTSGIKPAALSKVKDP  271 (632)
T ss_pred             cc----cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC--CHHHHHHHHHcCCCHHHhhccCCH
Confidence            32    22378999999999886 899999999999999999999999975322  222222222221111112222222


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                                  .+.++|..||.. ..+|||+.|+++
T Consensus       272 ------------evr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  272 ------------EVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             ------------HHHHHHHHHhcC-chhccCHHHHhh
Confidence                        355788999999 999999999985

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=1.8e-34  Score=299.24  Aligned_cols=261  Identities=22%  Similarity=0.312  Sum_probs=193.6

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|++.+.||+|+||.||+|+.. +|+.+|+|++...  .......+.+|+.++++++||||+++++++.+....++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4788899999999999999985 5889999998642  222335678899999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      ++ ++|.+++...  ...+++..+..++.||++||.|||+.+   ++||||||+||+++.++.+||+|||+++.+.... 
T Consensus        81 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-  153 (284)
T cd07839          81 CD-QDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-  153 (284)
T ss_pred             CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC-
Confidence            97 4787777543  245899999999999999999999987   9999999999999999999999999998653221 


Q ss_pred             cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC------cc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP------SQ  617 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~  617 (706)
                       .......++..|+|||.+.+. .++.++||||||+++|||++|+.|+....  ..................      ..
T Consensus       154 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07839         154 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN--DVDDQLKRIFRLLGTPTEESWPGVSK  230 (284)
T ss_pred             -CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCC--CHHHHHHHHHHHhCCCChHHhHHhhh
Confidence             112234578899999998764 47899999999999999999998853221  111111111111100000      00


Q ss_pred             ccc----ccccCcCC-----HHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          618 LID----ACFKDSFN-----LAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       618 ~~d----~~~~~~~~-----~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +.+    +.......     ......+.+++.+||+.||.+|||++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            000    00000000     011235568999999999999999999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=3.5e-34  Score=297.03  Aligned_cols=262  Identities=24%  Similarity=0.350  Sum_probs=198.2

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch-hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      +|++.++||.|++|.||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            5788899999999999999985 588899999865432 23466788999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++ +|.+++........+++..+..++.|++.||.|||+.+   ++|+||||+||++++++.++|+|||++........ 
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~-  155 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN-  155 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence            85 88888866554456899999999999999999999987   99999999999999999999999999976532211 


Q ss_pred             ccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC---------CC
Q 005236          546 GNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG---------MP  615 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~  615 (706)
                       ......++..|++||.+.+. .++.++||||||+++|||++|+.||......+   ............         ..
T Consensus       156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07836         156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED---QLLKIFRIMGTPTESTWPGISQL  231 (284)
T ss_pred             -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCCCChhhHHHHhcC
Confidence             11224568899999988654 57899999999999999999999976433222   111111111000         00


Q ss_pred             ccccccccc------CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          616 SQLIDACFK------DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       616 ~~~~d~~~~------~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..+......      ..........+.+++..|++.+|.+||+++|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            000000000      0000011234668999999999999999999985

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=7.3e-34  Score=295.81  Aligned_cols=264  Identities=24%  Similarity=0.351  Sum_probs=195.4

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++++|.+.+.||+|+||.||+|... +++.|++|++.... ......+.+|+.+++.++|+||+++++++..+...++||
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            3578999999999999999999874 58899999986532 223346788999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+. ++|.+++....  ..+.+..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||+++.....
T Consensus        83 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  156 (291)
T cd07870          83 EYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIP  156 (291)
T ss_pred             eccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence            9996 67777664332  34677888899999999999999987   999999999999999999999999999764321


Q ss_pred             CCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC--------
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG--------  613 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------  613 (706)
                      ..  ......++..|+|||++.+. .++.++||||||+++|||++|+.||.....  ..+.+...+.....+        
T Consensus       157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  232 (291)
T cd07870         157 SQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD--VFEQLEKIWTVLGVPTEDTWPGV  232 (291)
T ss_pred             CC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh--HHHHHHHHHHHcCCCChhhhhhh
Confidence            11  12234578899999998764 578999999999999999999999864322  112222222111100        


Q ss_pred             -----CCcccccccccCc-----CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          614 -----MPSQLIDACFKDS-----FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       614 -----~~~~~~d~~~~~~-----~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                           ...+.........     ........+.+++.+|++.||.+|||++|++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence                 0000000000000     00011234567889999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=6.6e-34  Score=288.81  Aligned_cols=250  Identities=30%  Similarity=0.459  Sum_probs=203.5

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      +|++.+.||+|++|.||++... +++.+++|++........+.+.+|+.++++++||||+++++.+......++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            4778899999999999999985 688999999977655567889999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++....  ..+++..+..++.|++.+|.+||+.+   ++|+||+|+||++++++.++|+|||.+........  
T Consensus        81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--  153 (253)
T cd05122          81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--  153 (253)
T ss_pred             CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence            999999986542  45899999999999999999999977   99999999999999999999999999987643322  


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                       .....++..|+|||.+....++.++||||||+++|+|++|+.|+......   .......    ......+...     
T Consensus       154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~----~~~~~~~~~~-----  220 (253)
T cd05122         154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM---KALFKIA----TNGPPGLRNP-----  220 (253)
T ss_pred             -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHH----hcCCCCcCcc-----
Confidence             23456889999999998888999999999999999999999997543211   1111111    1111111111     


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .  .-...+.+++..||+.+|.+|||+.|+++.
T Consensus       221 ~--~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         221 E--KWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             c--ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0  002346678899999999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=3e-34  Score=299.30  Aligned_cols=262  Identities=23%  Similarity=0.281  Sum_probs=193.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCe-----
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEE-----  457 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~-----  457 (706)
                      ++|++.+.||+|+||.||+|... +++.||||++....  ......+.+|+.+++.+. ||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46889999999999999999985 58899999875432  223457888999999995 6999999999987665     


Q ss_pred             eEEEEecCCCCChhhhhhcccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-CCCeEEeeec
Q 005236          458 KLLIYEFMPNKSLDSFIFDQER--CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFG  534 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfg  534 (706)
                      .++||||+++ +|.+++.....  ...+++..++.++.||++||.|||+.+   ++||||+|+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence            7999999986 78888865432  246899999999999999999999987   999999999999998 8999999999


Q ss_pred             cccccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      +++.+.....  ......+++.|+|||++.+ ..++.++||||||+++|||++|..||.....   .............+
T Consensus       157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~---~~~~~~~~~~~~~~  231 (295)
T cd07837         157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE---LQQLLHIFKLLGTP  231 (295)
T ss_pred             cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHHHhCCC
Confidence            9986532211  1122356788999998865 4679999999999999999999998754322   11111111111000


Q ss_pred             CC---cccc------------cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          614 MP---SQLI------------DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       614 ~~---~~~~------------d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..   ....            ...+. .........+.+++..||+.+|.+||++.|++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         232 TEQVWPGVSKLRDWHEFPQWKPQDLS-RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             ChhhCcchhhccchhhcCcccchhHH-HhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            00   0000            00000 000011234678999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=3.2e-34  Score=298.79  Aligned_cols=264  Identities=24%  Similarity=0.310  Sum_probs=196.6

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV  461 (706)
                      ++|++.+.||+|+||.||+|+.+ +++.+++|.+....  ......+.+|+.++++++||||+++++++...  ...++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            57899999999999999999986 47889999986432  22234567899999999999999999999877  889999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++ +|.+++....  ..+++..+..++.||+.||+|||+.+   ++|+||||+||++++++.+||+|||+++.+..
T Consensus        85 ~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          85 MEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             ehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            999975 8988886533  35899999999999999999999988   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHH--------HHHhhc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA--------WKLWNE  612 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~--------~~~~~~  612 (706)
                      ..  .......+++.|+|||.+.+. .++.++|+||||+++|||++|+.||...........+...        +..+..
T Consensus       159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (293)
T cd07843         159 PL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE  236 (293)
T ss_pred             Cc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhc
Confidence            32  112234578899999998764 4689999999999999999999998643322111111100        000000


Q ss_pred             ------CCCcccccccccCcCCHH-HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          613 ------GMPSQLIDACFKDSFNLA-EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       613 ------~~~~~~~d~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                            ..........+...+... ....+.+++..||+.+|++|||+.|++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence                  000000011111111111 1234567899999999999999999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-35  Score=295.06  Aligned_cols=248  Identities=27%  Similarity=0.352  Sum_probs=199.7

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ..+.|+.-++||+||||.||-.+.. .|+.+|.|++.+.   ..+......+|-.++.+++.+.||.+--+|+..+.+++
T Consensus       183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl  262 (591)
T KOG0986|consen  183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL  262 (591)
T ss_pred             cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence            3467888899999999999999875 4888999988552   23444567889999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |+..|+||+|.-+|++... ..+++.+++.+|.+|+.||++||...   ||.||+||+|||||+.|+++|+|+|||..+.
T Consensus       263 VLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~  338 (591)
T KOG0986|consen  263 VLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIP  338 (591)
T ss_pred             EEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecC
Confidence            9999999999999987665 55899999999999999999999887   9999999999999999999999999999875


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ..+..   ...+||.+|||||++.+..|+...|.||+||+||||+.|+.||.........+.+......    ...++. 
T Consensus       339 ~g~~~---~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~----~~~ey~-  410 (591)
T KOG0986|consen  339 EGKPI---RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE----DPEEYS-  410 (591)
T ss_pred             CCCcc---ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc----chhhcc-
Confidence            43322   2248999999999999999999999999999999999999998765544333222221111    111111 


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC  652 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt  652 (706)
                          +.++    .++..+....|+.||.+|--
T Consensus       411 ----~kFS----~eakslc~~LL~Kdp~~RLG  434 (591)
T KOG0986|consen  411 ----DKFS----EEAKSLCEGLLTKDPEKRLG  434 (591)
T ss_pred             ----cccC----HHHHHHHHHHHccCHHHhcc
Confidence                1122    23445667889999999963

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=5.5e-34  Score=296.92  Aligned_cols=251  Identities=25%  Similarity=0.407  Sum_probs=201.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|.+.+.||+|+||.||++... +++.+++|.+........+.+.+|+.++++++||||+++++.+...+..++|+||
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            368999999999999999999874 5788999998655555567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++.+.    .+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||++........
T Consensus        98 ~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~  170 (293)
T cd06647          98 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (293)
T ss_pred             CCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence            9999999998542    3678899999999999999999988   99999999999999999999999999876543222


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        ......+++.|+|||.+....++.++||||||+++|++++|+.||...........      ....+.. .+     .
T Consensus       171 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------~~~~~~~-~~-----~  236 (293)
T cd06647         171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATNGTP-EL-----Q  236 (293)
T ss_pred             --ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------hhcCCCC-CC-----C
Confidence              12234688899999999888899999999999999999999999854322111000      0001110 00     0


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        ........+.+++..||+.+|.+||++.+++.+
T Consensus       237 --~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         237 --NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             --CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              000112245678899999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=7.8e-34  Score=293.35  Aligned_cols=247  Identities=27%  Similarity=0.435  Sum_probs=198.1

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      -|++.+.||+|+||.||+|... +++.+|+|.+... .....+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            4677899999999999999874 5789999987543 2344567889999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++..    ..+++..+..++.|++.++.|||+.+   ++|+||+|+||+++.++.++|+|||++..+..... 
T Consensus        85 ~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-  156 (277)
T cd06641          85 GGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-  156 (277)
T ss_pred             CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchh-
Confidence            99999999853    34789999999999999999999987   99999999999999999999999999876533211 


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                       ......++..|+|||.+.+..++.++||||||+++|+|++|..|+......   ....    .........+     ..
T Consensus       157 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~----~~~~~~~~~~-----~~  223 (277)
T cd06641         157 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM---KVLF----LIPKNNPPTL-----EG  223 (277)
T ss_pred             -hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH---HHHH----HHhcCCCCCC-----Cc
Confidence             122346788999999998888999999999999999999999997532211   1111    1111111111     11


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .    ....+.+++.+||+.+|.+||++.++++.
T Consensus       224 ~----~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         224 N----YSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             c----cCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            1    12345678999999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-34  Score=294.17  Aligned_cols=248  Identities=24%  Similarity=0.412  Sum_probs=197.4

Q ss_pred             CCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcC---CcceeeeEeEEEeCCeeEEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQ---HRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .|++.+.||+|+||.||+|.. .+++.+++|.+... .....+.+.+|+.++++++   |||++++++++..+...++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            477889999999999999997 46889999988653 3445667889999999997   999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++...    .+++..++.++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||++..+...
T Consensus        82 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06917          82 EYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN  154 (277)
T ss_pred             ecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence            999999999988542    5889999999999999999999988   999999999999999999999999999876433


Q ss_pred             CCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ..  ......|+..|+|||.+.+. .++.++||||||+++|+|++|+.|+......   ..+.    .........+.  
T Consensus       155 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~---~~~~----~~~~~~~~~~~--  223 (277)
T cd06917         155 SS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF---RAMM----LIPKSKPPRLE--  223 (277)
T ss_pred             cc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh---hhhh----ccccCCCCCCC--
Confidence            21  22234688999999998654 5789999999999999999999998543211   1110    01111111111  


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                         ...   ....+.+++.+||+.+|.+||++.|+++.
T Consensus       224 ---~~~---~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         224 ---DNG---YSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             ---ccc---CCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence               110   12356678899999999999999999863

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=2.6e-34  Score=293.54  Aligned_cols=247  Identities=25%  Similarity=0.330  Sum_probs=199.3

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      +|++.+.||.|+||.||++... .++.+|+|.+...   .....+.+.+|+.++++++||||+++++++.++...++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            5788999999999999999986 4889999998653   22456789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++...   ..+++..+..++.||++||.|||+.+   ++|+||+|+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  154 (258)
T cd05578          81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT  154 (258)
T ss_pred             CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence            99999999998554   35788999999999999999999987   9999999999999999999999999998764332


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                         ......++..|+|||.+.+..++.++|+||||+++|+|++|+.|+............    .....  .......  
T Consensus       155 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~~--~~~~~~~--  223 (258)
T cd05578         155 ---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR----AKQET--ADVLYPA--  223 (258)
T ss_pred             ---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHH----HHhcc--ccccCcc--
Confidence               223356788999999999888999999999999999999999997654432111111    11111  0000110  


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCCh--hHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCM--PSVI  657 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~--~ev~  657 (706)
                            .....+.+++.+||+.+|.+||++  +|++
T Consensus       224 ------~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         224 ------TWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             ------cCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence                  111456688999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=9.8e-34  Score=293.49  Aligned_cols=251  Identities=25%  Similarity=0.393  Sum_probs=191.6

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHH-HhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIIL-FSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.+.||+|+||.||+++.. +++.||+|++.... ......+..|+.. ++.++||||+++++++......++|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            47889999999999999999985 58899999986532 2233455556665 666789999999999999999999999


Q ss_pred             cCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          464 FMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       464 ~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |++ ++|.+++... .....+++..++.++.||+.||+|||++ +   ++||||||+||+++.++.+||+|||++..+..
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~  156 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD  156 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            997 6888887542 2235689999999999999999999986 5   99999999999999999999999999986532


Q ss_pred             CCCcccccccccccCccCcccccc----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASD----GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ..   ......++..|+|||.+.+    ..++.++|+||||+++|||++|+.|+....  ........   ... .....
T Consensus       157 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~---~~~-~~~~~  227 (283)
T cd06617         157 SV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK--TPFQQLKQ---VVE-EPSPQ  227 (283)
T ss_pred             cc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc--cCHHHHHH---HHh-cCCCC
Confidence            21   1122457889999998865    456899999999999999999999975322  11111111   111 11111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +...    ..    ...+.+++..||+.+|.+||++++|++
T Consensus       228 ~~~~----~~----~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         228 LPAE----KF----SPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             CCcc----cc----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1111    11    124567889999999999999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-34  Score=296.33  Aligned_cols=261  Identities=23%  Similarity=0.321  Sum_probs=197.3

Q ss_pred             CCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeEEEEe
Q 005236          389 FSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKLLIYE  463 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~e  463 (706)
                      |++.++||+|+||.||+|+..+ ++.+|+|++....  ....+.+.+|+.++++++||||+++++++...  ...++|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            5678999999999999999864 7899999987642  33456788999999999999999999999988  78999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++ +|.+++....  ..+++..++.++.||++||+|||+.+   ++|+||+|+||++++++.+||+|||++.......
T Consensus        81 ~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840          81 YMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             cccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence            9975 8888885432  45889999999999999999999987   9999999999999999999999999998764332


Q ss_pred             CcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC---CCccc-
Q 005236          544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG---MPSQL-  618 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-  618 (706)
                      .. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.|+......   .............   ....+ 
T Consensus       155 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd07840         155 SA-DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL---EQLEKIFELCGSPTDENWPGVS  230 (287)
T ss_pred             cc-cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCchhhccccc
Confidence            11 1222456788999998765 46789999999999999999999997543322   1111111111100   00000 


Q ss_pred             -------------ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          619 -------------IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       619 -------------~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                                   ....+...........+.+++.+||+.+|.+||+++++++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         231 KLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             cchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                         00000000000013457789999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=4.4e-34  Score=296.68  Aligned_cols=254  Identities=26%  Similarity=0.412  Sum_probs=203.5

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ...+.|+..+.||+|++|.||+|... +++.+++|++..... ..+.+.+|++++++++|+||+++++.+......++|+
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            35577889999999999999999986 588999999865444 5678899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++....  ..+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++......
T Consensus        95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  169 (286)
T cd06614          95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE  169 (286)
T ss_pred             eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence            9999999999996543  36899999999999999999999987   999999999999999999999999998765322


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      ..  ......++..|+|||++.+..++.++||||||+++|+|++|+.|+......   .....   .. ......+... 
T Consensus       170 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~---~~~~~---~~-~~~~~~~~~~-  239 (286)
T cd06614         170 KS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL---RALFL---IT-TKGIPPLKNP-  239 (286)
T ss_pred             hh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH---HHHHH---HH-hcCCCCCcch-
Confidence            11  122345788999999999889999999999999999999999997532221   11111   11 1111111110 


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        ...    ...+.+++.+||+.+|.+||++.+|++.
T Consensus       240 --~~~----~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         240 --EKW----SPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             --hhC----CHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence              001    1246678999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=5.2e-34  Score=299.57  Aligned_cols=263  Identities=24%  Similarity=0.312  Sum_probs=194.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  460 (706)
                      .++|++.++||+|+||.||+|... .++.||+|++....  ......+.+|+.++++++|+||+++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            468999999999999999999985 48899999986432  12233567899999999999999999998765  46899


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++ +|.+++....  ..+++..+..++.||++||+|||+.+   ++||||||+||++++++.+||+|||++....
T Consensus        86 v~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          86 VMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             EEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            9999975 7888875432  45889999999999999999999988   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC---CCc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG---MPS  616 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~  616 (706)
                      ....  ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......   .............   ..+
T Consensus       160 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~  234 (309)
T cd07845         160 LPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI---EQLDLIIQLLGTPNESIWP  234 (309)
T ss_pred             CccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCChhhch
Confidence            3221  1122345788999999865 56899999999999999999999998643222   2222111111100   000


Q ss_pred             ccc-----cc-cc--cCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          617 QLI-----DA-CF--KDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       617 ~~~-----d~-~~--~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+.     .. .+  .......     ....+.+++..||+.||++|||++|++..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            000     00 00  0000000     12345679999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=9.3e-34  Score=294.01  Aligned_cols=247  Identities=24%  Similarity=0.390  Sum_probs=197.6

Q ss_pred             CCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          389 FSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      |...+.||+|++|.||++.. .+++.+++|++........+.+.+|+.+++.++||||+++++++...+..++|+||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            44457999999999999987 46888999998655555566788999999999999999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      ++|.+++..    ..+++..+..++.|++.||+|||+.+   ++||||+|+||+++.++.++|+|||++........  .
T Consensus       101 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~  171 (285)
T cd06648         101 GALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--R  171 (285)
T ss_pred             CCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc--c
Confidence            999999855    34788999999999999999999988   99999999999999999999999999876533221  1


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....|+..|+|||.+.+..++.++||||||+++|||++|+.|+...   ..........    .........     ..
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~---~~~~~~~~~~----~~~~~~~~~-----~~  239 (285)
T cd06648         172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE---PPLQAMKRIR----DNLPPKLKN-----LH  239 (285)
T ss_pred             cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC---CHHHHHHHHH----hcCCCCCcc-----cc
Confidence            22345889999999999888999999999999999999999997432   1122221111    111111110     00


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                        .....+.+++.+||+.+|.+||++.++++
T Consensus       240 --~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         240 --KVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             --cCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence              01135678999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-34  Score=293.73  Aligned_cols=248  Identities=22%  Similarity=0.330  Sum_probs=204.4

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .=|.+.+.||+|.|.+|-++++ =.|..||||++.+.  .......+.+|++-|+.++|||||+||.+......+|||+|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            4577889999999999999886 46899999999764  33445678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-CCCCeEEeeeccccccCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~kl~Dfgla~~~~~~  542 (706)
                      .=++|+|.+||-.++.  -+.+....+++.||+.|+.|.|..+   +|||||||+||.+- .-|-+||.|||++..+.+.
T Consensus        98 LGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG  172 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG  172 (864)
T ss_pred             ecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence            9999999999976653  4788889999999999999999877   99999999998765 5688999999999876543


Q ss_pred             CCcccccccccccCccCccccccCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFS-VKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      +   .....+|+..|.|||++.+..|+ ++.||||||||||.|++|+.||......+.+..|-..               
T Consensus       173 ~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC---------------  234 (864)
T KOG4717|consen  173 K---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC---------------  234 (864)
T ss_pred             c---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc---------------
Confidence            3   33457899999999999999987 5789999999999999999998765544433332111               


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      -.  ..+-.-..++.+|+..||..||.+|.+.+||+..
T Consensus       235 KY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  235 KY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST  270 (864)
T ss_pred             cc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence            00  1111223467889999999999999999999753

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-34  Score=305.64  Aligned_cols=267  Identities=22%  Similarity=0.312  Sum_probs=197.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-----ee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-----EK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~  458 (706)
                      .++|++.++||+|+||.||+|+.. +++.||||++... .......+.+|+.++++++||||+++++++....     ..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            478999999999999999999874 5889999998643 2334566888999999999999999999876543     57


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++|+||+++ +|..++..    ..+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||+++.
T Consensus        84 ~lv~e~~~~-~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~  155 (336)
T cd07849          84 YIVQELMET-DLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI  155 (336)
T ss_pred             EEEehhccc-CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence            999999975 77777633    34889999999999999999999988   99999999999999999999999999987


Q ss_pred             cCCCCCcc-cccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          539 FGGDETEG-NTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       539 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      ........ ......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||.....   .............+...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~---~~~~~~~~~~~~~~~~~  232 (336)
T cd07849         156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY---LHQLNLILGVLGTPSQE  232 (336)
T ss_pred             ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHcCCCCHH
Confidence            54322111 1223568899999998755 5689999999999999999999999754221   11111111111111000


Q ss_pred             ---cccccc---------ccCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH--hcCC
Q 005236          617 ---QLIDAC---------FKDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM--LGSE  663 (706)
Q Consensus       617 ---~~~d~~---------~~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~--L~~~  663 (706)
                         .+.+..         ........     ....+.+++.+||+.+|++|||+.|+++.  ++..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence               000000         00000000     12346789999999999999999999987  5543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=5.8e-34  Score=295.11  Aligned_cols=258  Identities=27%  Similarity=0.425  Sum_probs=197.8

Q ss_pred             HHHHHHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEe--
Q 005236          379 LATIANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIH--  454 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~--  454 (706)
                      +..+..+.+.|++.+.||+|+||.||+|+.. .++.+|+|.+.... ....++..|+.++.++ +||||+++++++..  
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   86 (282)
T cd06636           8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS   86 (282)
T ss_pred             hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence            3344455678999999999999999999984 57889999875433 3346788899999998 69999999999863  


Q ss_pred             ----CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          455 ----GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       455 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                          ....+++|||+++|+|.+++.... ...+++..+..++.||+.||.|||+.+   ++|+||+|+||++++++.++|
T Consensus        87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l  162 (282)
T cd06636          87 PPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKL  162 (282)
T ss_pred             ccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence                457899999999999999986533 244778888999999999999999988   999999999999999999999


Q ss_pred             eeeccccccCCCCCcccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHH
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH  605 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~  605 (706)
                      +|||++.......  .......|+..|+|||.+.     ...++.++||||||+++|||++|+.||......   ..+..
T Consensus       163 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~---~~~~~  237 (282)
T cd06636         163 VDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM---RALFL  237 (282)
T ss_pred             eeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH---hhhhh
Confidence            9999987653211  1223356889999999986     346888999999999999999999997533211   11111


Q ss_pred             HHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       606 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                         . .......+.    ....    ...+.+++..||+.+|.+||++.||++
T Consensus       238 ---~-~~~~~~~~~----~~~~----~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         238 ---I-PRNPPPKLK----SKKW----SKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             ---H-hhCCCCCCc----cccc----CHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence               0 011111110    0011    124667899999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=3e-34  Score=297.52  Aligned_cols=261  Identities=24%  Similarity=0.317  Sum_probs=194.7

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|++.+.||.|++|.||+|+.. +++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4788899999999999999885 58899999886432  22345788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +. ++|..++.... ...+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.+||+|||+++.+.....
T Consensus        81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~  155 (284)
T cd07860          81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR  155 (284)
T ss_pred             cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence            96 68988886543 345889999999999999999999987   99999999999999999999999999886533211


Q ss_pred             cccccccccccCccCccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC---------
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM---------  614 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---------  614 (706)
                        ......++..|+|||.+.+.. ++.++||||||+++|||+||+.||......   ..............         
T Consensus       156 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07860         156 --TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---DQLFRIFRTLGTPDEVVWPGVTS  230 (284)
T ss_pred             --ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHHHHhCCCChhhhhhhhH
Confidence              122235688999999887644 688999999999999999999997543221   11111111100000         


Q ss_pred             -------CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          615 -------PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       615 -------~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                             ........+.... ......+.+++.+||+.||.+|||++++++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         231 LPDYKPSFPKWARQDFSKVV-PPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHHHHhhcccccccCHHHHc-ccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence                   0000000000000 0001235678999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=7e-34  Score=304.28  Aligned_cols=260  Identities=25%  Similarity=0.288  Sum_probs=196.0

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC------
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG------  455 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  455 (706)
                      ..++|++.+.||+|+||.||+|... +++.||+|++...  .....+.+.+|+.++++++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            3478999999999999999999974 5889999998642  334456778899999999999999999988643      


Q ss_pred             CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                      ...++||||+.+ +|.+.+...     ++...+..++.|++.||+|||+.+   ++||||||+||+++.++.+||+|||+
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~  164 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  164 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence            356999999964 787777422     788889999999999999999987   99999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh-----
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW-----  610 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~-----  610 (706)
                      ++.......   .....++..|+|||.+.+..++.++||||||+++|+|++|+.||...+..   ..........     
T Consensus       165 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~  238 (353)
T cd07850         165 ARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI---DQWNKIIEQLGTPSD  238 (353)
T ss_pred             ceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHHhcCCCCH
Confidence            987533221   22345788999999999999999999999999999999999997543221   1111110000     


Q ss_pred             -------------hcCC-------CcccccccccC----cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          611 -------------NEGM-------PSQLIDACFKD----SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       611 -------------~~~~-------~~~~~d~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                                   ....       ..++....+..    .........+.+++.+||+.||++|||+.|+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                         0000       00111110000    0011123356789999999999999999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5e-34  Score=317.68  Aligned_cols=267  Identities=20%  Similarity=0.261  Sum_probs=187.2

Q ss_pred             HhccCCCccceeccCCceeEEEEEeCC--CcEEEEE------------------EcCccchhhHHHHHHHHHHHhhcCCc
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLAD--EQEIAVK------------------RLSKISEQGLKELKNEIILFSKLQHR  443 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~h~  443 (706)
                      ...++|++.++||+|+||.||++..+.  +...++|                  ++. ........+.+|+.++++++||
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hp  223 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHE  223 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCC
Confidence            345789999999999999999987532  2112222                  111 1223345688999999999999


Q ss_pred             ceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEE
Q 005236          444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQER--CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVL  521 (706)
Q Consensus       444 niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nil  521 (706)
                      ||+++++++...+..++|+|++. ++|.+++.....  ...........++.||+.||+|||+.+   |+||||||+|||
T Consensus       224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NIL  299 (501)
T PHA03210        224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIF  299 (501)
T ss_pred             CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEE
Confidence            99999999999999999999985 567776643221  122335567789999999999999988   999999999999


Q ss_pred             EcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005236          522 LDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLN  601 (706)
Q Consensus       522 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~  601 (706)
                      |+.++.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||++|||++|..++..........
T Consensus       300 l~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~  378 (501)
T PHA03210        300 LNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK  378 (501)
T ss_pred             ECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence            999999999999999876432221 2223579999999999999999999999999999999999886433222222212


Q ss_pred             HHHHHHHHhh---cCCCc---cc---------------ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          602 LIRHAWKLWN---EGMPS---QL---------------IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       602 ~~~~~~~~~~---~~~~~---~~---------------~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+........   +..+.   .+               +...+....   ....+.+++.+||+.||.+|||+.|++..
T Consensus       379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLG---LPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcC---CChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            2111111110   00000   00               000000000   01134567889999999999999999864

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=6.8e-34  Score=298.73  Aligned_cols=265  Identities=23%  Similarity=0.317  Sum_probs=193.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE------  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  456 (706)
                      .++|++.++||+|+||.||+|+.. +++.||||++....  ......+.+|+.++++++||||+++++++....      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            357999999999999999999985 58899999885432  222345678999999999999999999987654      


Q ss_pred             --eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          457 --EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       457 --~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                        ..++||||+.+ +|.+++...  ...+++..++.++.||+.||+|||+.+   ++|+||||+||+++.++.+||+|||
T Consensus        91 ~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg  164 (310)
T cd07865          91 KGSFYLVFEFCEH-DLAGLLSNK--NVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFG  164 (310)
T ss_pred             CceEEEEEcCCCc-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCC
Confidence              34999999975 787777433  235789999999999999999999987   9999999999999999999999999


Q ss_pred             cccccCCCCCc--ccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh
Q 005236          535 LARAFGGDETE--GNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       535 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      ++..+......  .......++..|+|||.+.+. .++.++||||||+++|||++|+.|+...........+........
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~  244 (310)
T cd07865         165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT  244 (310)
T ss_pred             CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            99876432211  112234578899999988664 478899999999999999999998754332222222222111100


Q ss_pred             cCCCccc------------------ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          612 EGMPSQL------------------IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       612 ~~~~~~~------------------~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ....+..                  ....+...   .+...+.+++.+||+.+|.+|||++|+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPY---VKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             hhhcccccchhhhhhccCCCccchhhHHhcccc---cCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            0000000                  00000000   012345689999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-34  Score=295.64  Aligned_cols=260  Identities=24%  Similarity=0.313  Sum_probs=194.3

Q ss_pred             CCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          389 FSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      |++.+.||.|++|.||+|... +++.||+|++....  ....+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            567899999999999999975 68899999986432  233457888999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      + ++|.+++..... ..+++..+..++.|+++||+|||+.+   ++|+||+|+||+++.++.++|+|||+++....... 
T Consensus        81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-  154 (283)
T cd07835          81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-  154 (283)
T ss_pred             C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence            5 689998865432 35899999999999999999999987   99999999999999999999999999976532211 


Q ss_pred             ccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC---------C
Q 005236          546 GNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM---------P  615 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~  615 (706)
                       ......++..|+|||++.+. .++.++||||||+++|||++|+.||........   .....+......         .
T Consensus       155 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd07835         155 -TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ---LFRIFRTLGTPDEDVWPGVTSL  230 (283)
T ss_pred             -ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChHHhhhhhhc
Confidence             11223568899999988664 578999999999999999999999754322111   111111000000         0


Q ss_pred             ccccc-------ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 SQLID-------ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ~~~~d-------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+...       ..... ........+.+++.+||+.+|.+|||++|+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         231 PDYKPTFPKWARQDLSK-VVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             hhhhhhcccccccchhh-hcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            00000       00000 000011356689999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=1.4e-33  Score=296.10  Aligned_cols=248  Identities=27%  Similarity=0.410  Sum_probs=194.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .+.|.+.+.||+|+||.||+|+.. +++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            356889999999999999999985 5889999988542   233456788999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||++ |+|.+++....  ..+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++.....
T Consensus        94 ~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~  167 (307)
T cd06607          94 MEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSP  167 (307)
T ss_pred             HHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence            99997 56766664322  35899999999999999999999987   99999999999999999999999999876432


Q ss_pred             CCCcccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      .      ....++..|+|||++.   ...++.++||||||+++|||++|+.|+.....   .....   ... ......+
T Consensus       168 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~---~~~~~---~~~-~~~~~~~  234 (307)
T cd06607         168 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALY---HIA-QNDSPTL  234 (307)
T ss_pred             C------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH---HHHHH---HHh-cCCCCCC
Confidence            1      2245788999999884   45688999999999999999999999743221   11111   111 1111111


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                      ..        ......+.+++.+||+.+|.+||++.+|+...
T Consensus       235 ~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  268 (307)
T cd06607         235 SS--------NDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR  268 (307)
T ss_pred             Cc--------hhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence            00        01123467889999999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-35  Score=305.25  Aligned_cols=250  Identities=27%  Similarity=0.437  Sum_probs=201.8

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCc-EEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      +.|.|+-.||.|+||.||++..++.. ..|.|.+...+...++.+.-|+++|+..+||+||+|++.|...+.++++.|||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            56788889999999999999987644 34678887778888999999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      .||..+..+..-.  ..+.+..+..+.+|++.||.|||+++   |||||||+.|||+.-+|.++|+|||.+....  ...
T Consensus       112 ~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~  184 (1187)
T KOG0579|consen  112 GGGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STR  184 (1187)
T ss_pred             CCchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccch--hHH
Confidence            9999999986644  45888999999999999999999998   9999999999999999999999999986531  122


Q ss_pred             ccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          546 GNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      .......|||.|||||+..     ..+|+.++||||||++|.||.-+.+|-..   -+..   .-...+.. ..++.++.
T Consensus       185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe---lnpM---RVllKiaK-SePPTLlq  257 (1187)
T KOG0579|consen  185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE---LNPM---RVLLKIAK-SEPPTLLQ  257 (1187)
T ss_pred             hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc---cchH---HHHHHHhh-cCCCcccC
Confidence            2334578999999999875     45899999999999999999999998432   1222   11222222 22222322


Q ss_pred             c-cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          621 A-CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       621 ~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      + .|        ...+.+++..||..||..||++.++++
T Consensus       258 PS~W--------s~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  258 PSHW--------SRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             cchh--------hhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            1 12        223457888999999999999999875

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=3.3e-33  Score=291.20  Aligned_cols=258  Identities=19%  Similarity=0.212  Sum_probs=181.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCC----cEEEEEEcCccchhhH-----------HHHHHHHHHHhhcCCcceeeeEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSKISEQGL-----------KELKNEIILFSKLQHRNLVKLLG  450 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~  450 (706)
                      .++|.+.++||+|+||.||+|...++    ..+|+|..........           .....+...+..++|+||+++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            36899999999999999999997554    4556665322211110           11223334556678999999999


Q ss_pred             EEEeCC----eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC
Q 005236          451 CCIHGE----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM  526 (706)
Q Consensus       451 ~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~  526 (706)
                      ++....    ..++++|++.. ++.+.+...   ...++..+..++.|+++||+|||+.+   |+||||||+|||++.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~  163 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRI---KCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNN  163 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHHhh---ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCC
Confidence            876544    34677887643 555555322   22467788899999999999999987   99999999999999999


Q ss_pred             CeEEeeeccccccCCCCCc-----ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005236          527 NPKISDFGLARAFGGDETE-----GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLN  601 (706)
Q Consensus       527 ~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~  601 (706)
                      .++|+|||+|+.+......     .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~  243 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI  243 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence            9999999999876432111     12223469999999999999999999999999999999999999987543222111


Q ss_pred             HHHH--HHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          602 LIRH--AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       602 ~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ....  .......+..  .+.     ..    ...+.+++..|++.+|++||+++++++.|.
T Consensus       244 ~~~~~~~~~~~~~~~~--~~~-----~~----~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        244 HAAKCDFIKRLHEGKI--KIK-----NA----NKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HHhHHHHHHHhhhhhh--ccC-----CC----CHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            1100  1111111110  000     01    134667888999999999999999998764

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2.5e-33  Score=289.54  Aligned_cols=241  Identities=28%  Similarity=0.369  Sum_probs=187.4

Q ss_pred             eccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          395 LGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       395 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      ||+|+||+||++... +++.+|+|.+....   ....+.+.+|+.++++++||||+++++.+...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            699999999999874 58899999886422   22345667899999999999999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccc
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR  550 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  550 (706)
                      .+++..... ..+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++......   .....
T Consensus        81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~  153 (277)
T cd05577          81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIKG  153 (277)
T ss_pred             HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccC---Ccccc
Confidence            999965432 35789999999999999999999988   999999999999999999999999998865331   11223


Q ss_pred             cccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHH
Q 005236          551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLA  630 (706)
Q Consensus       551 ~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  630 (706)
                      ..++..|+|||++.+..++.++||||||+++|+|++|+.||...........+...   ... ....+     ....   
T Consensus       154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~-~~~~~-----~~~~---  221 (277)
T cd05577         154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRR---TLE-MAVEY-----PDKF---  221 (277)
T ss_pred             ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhc---ccc-ccccC-----CccC---
Confidence            45788999999998888999999999999999999999998543332111111110   000 00000     0111   


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCChhH
Q 005236          631 EVIRCIHIGLLCVQQYPEDRPCMPS  655 (706)
Q Consensus       631 ~~~~~~~l~~~cl~~~p~~RPt~~e  655 (706)
                       ...+.+++..||+.+|.+||+..+
T Consensus       222 -~~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         222 -SPEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             -CHHHHHHHHHHccCChhHccCCCc
Confidence             224567889999999999994444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=2e-33  Score=286.73  Aligned_cols=250  Identities=25%  Similarity=0.408  Sum_probs=198.3

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|++.+.||+|+||.||+|..+ ++..+|+|.+...  .....+.+.+|+.+++.++|+||+++++.+......++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4788899999999999999985 4788999988543  223456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-CeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfgla~~~~~~~  543 (706)
                      +++++|.+++..... ..+++..+..++.|++.||.|||+.+   ++|+||||+||++++++ .+||+|||.+.......
T Consensus        81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~  156 (257)
T cd08225          81 CDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM  156 (257)
T ss_pred             CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence            999999999865332 35789999999999999999999987   99999999999999886 46999999998764322


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      .  ......|++.|+|||++.+..++.++||||||+++|||++|+.|+....   ....   ...... .....+.    
T Consensus       157 ~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~---~~~~~~-~~~~~~~----  223 (257)
T cd08225         157 E--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN---LHQL---VLKICQ-GYFAPIS----  223 (257)
T ss_pred             c--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHH---HHHHhc-ccCCCCC----
Confidence            1  1223468899999999988899999999999999999999999974321   1111   111111 1111111    


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       ...    ...+.+++.+|++.+|++|||+.||++.
T Consensus       224 -~~~----~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         224 -PNF----SRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             -CCC----CHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence             011    1246678899999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.4e-33  Score=292.14  Aligned_cols=258  Identities=21%  Similarity=0.256  Sum_probs=190.6

Q ss_pred             CCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeC--CeeEEEEe
Q 005236          389 FSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHG--EEKLLIYE  463 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lV~e  463 (706)
                      |++.++||+|+||.||+|... +++.+|+|+++... ........+|+.++.++. ||||+++++++.+.  +..++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            667899999999999999974 58899999986532 222234457888888885 99999999999987  88999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |++ ++|.+++....  ..+++..+..++.|++.||+|||+.+   ++||||+|+||+++. +.+||+|||+++.+....
T Consensus        81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~  153 (282)
T cd07831          81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP  153 (282)
T ss_pred             cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence            997 57877775432  46899999999999999999999987   999999999999999 999999999998764322


Q ss_pred             CcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc----------
Q 005236          544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE----------  612 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~----------  612 (706)
                      .   .....++..|+|||++.. ..++.++|||||||++|||++|+.||.....   .+.+.........          
T Consensus       154 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  227 (282)
T cd07831         154 P---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE---LDQIAKIHDVLGTPDAEVLKKFR  227 (282)
T ss_pred             C---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH---HHHHHHHHHHcCCCCHHHHHhhc
Confidence            1   122457889999997644 5678999999999999999999999854332   1122111111100          


Q ss_pred             -CCCcccccccccC----cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          613 -GMPSQLIDACFKD----SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       613 -~~~~~~~d~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       ........+....    .........+.+++.+||+.+|++||+++++++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence             0000000000000    0000123467789999999999999999999863

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.6e-33  Score=292.79  Aligned_cols=255  Identities=27%  Similarity=0.359  Sum_probs=193.0

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|...++||+|+||.||+++.. .++.+|+|++.... ......+.+|+.++.++. ||||+++++++..+...+++||
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e   83 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME   83 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence            35667789999999999999985 47899999986532 344567889999999996 9999999999999999999999


Q ss_pred             cCCCCChhhhhhc--ccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          464 FMPNKSLDSFIFD--QERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       464 ~~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |+.. +|.++...  ......+++..+..++.|++.||+|||+. +   ++||||||+||+++.++.+||+|||+++.+.
T Consensus        84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616          84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            9864 55443321  11224588999999999999999999975 5   9999999999999999999999999998653


Q ss_pred             CCCCcccccccccccCccCccccccC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDG---QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ...   ......++..|+|||++...   .++.++||||||+++|||++|+.||....     .......+.... ....
T Consensus       160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~-~~~~  230 (288)
T cd06616         160 DSI---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVKG-DPPI  230 (288)
T ss_pred             cCC---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcCC-CCCc
Confidence            321   11224578899999999776   68999999999999999999999975432     111111111111 1111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      +.     ..........+.+++.+||+.+|.+|||+++|++.
T Consensus       231 ~~-----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         231 LS-----NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             CC-----CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            11     11111122356789999999999999999999864

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=1.5e-33  Score=294.01  Aligned_cols=263  Identities=24%  Similarity=0.319  Sum_probs=194.0

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.+.||+|++|.||+|+.. +++.||+|++....  ....+.+.+|+.++++++||||+++++++......++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            57899999999999999999985 58899999885432  2334678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-CCCeEEeeeccccccCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGD  542 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgla~~~~~~  542 (706)
                      |++ ++|.+++..... ..+++..+..++.||+.||+|||+.+   ++|+||+|+||+++. ++.+||+|||++......
T Consensus        82 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         82 YLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP  156 (294)
T ss_pred             ccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence            996 578777744332 23577888899999999999999987   999999999999985 567999999999865332


Q ss_pred             CCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc----
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ----  617 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----  617 (706)
                      ..  ......+++.|+|||++.+ ..++.++||||||+++|+|++|+.||.....   ...+.........+....    
T Consensus       157 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~  231 (294)
T PLN00009        157 VR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE---IDELFKIFRILGTPNEETWPGV  231 (294)
T ss_pred             cc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCChhhcccc
Confidence            11  1122457889999999866 4678999999999999999999999754322   111211111111110000    


Q ss_pred             --ccc-----ccccCc----CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          618 --LID-----ACFKDS----FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       618 --~~d-----~~~~~~----~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        +.+     +.....    ........+.+++.+||+.+|++||++.++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              000     000000    000112246789999999999999999999863

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=4.2e-33  Score=293.75  Aligned_cols=254  Identities=28%  Similarity=0.421  Sum_probs=197.3

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .|...+.||+|+||.||+|+.. ++..+|+|++...   .....+.+.+|+.++++++|||++++++++.++...++|||
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            4677899999999999999974 5789999998642   23345678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++ +|.+++...  ...+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||++.....  
T Consensus       106 ~~~g-~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--  177 (317)
T cd06635         106 YCLG-SASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP--  177 (317)
T ss_pred             CCCC-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC--
Confidence            9975 777776433  245889999999999999999999988   99999999999999999999999999875422  


Q ss_pred             CcccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                          .....++..|+|||++.   ...++.++||||||+++|||++|+.|+.....   ......   ........ ...
T Consensus       178 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~~~---~~~~~~~~-~~~  246 (317)
T cd06635         178 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYH---IAQNESPT-LQS  246 (317)
T ss_pred             ----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH---HHHHHH---HHhccCCC-CCC
Confidence                22346788999999974   45789999999999999999999999753211   111111   11111110 000


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCCCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQ  668 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~~~  668 (706)
                              ......+.+++.+||+.+|.+||++.+|++.+--....+.
T Consensus       247 --------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~  286 (317)
T cd06635         247 --------NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPE  286 (317)
T ss_pred             --------ccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcc
Confidence                    0111245678999999999999999999987765544443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=7.6e-34  Score=302.00  Aligned_cols=264  Identities=23%  Similarity=0.322  Sum_probs=196.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-----Ce
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-----EE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  457 (706)
                      .++|.+.+.||+|+||.||+|+.. .++.||||++...  .......+.+|+.+++.++||||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            457999999999999999999974 5889999998642  233455678899999999999999999988654     34


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+. ++|.+++...   ..+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            799999996 6888888543   35889999999999999999999987   9999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC-
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP-  615 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-  615 (706)
                      ......  .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.......   .............. 
T Consensus       157 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~  231 (337)
T cd07858         157 TTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH---QLKLITELLGSPSEE  231 (337)
T ss_pred             ccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHHHhCCCChH
Confidence            753321  11223467889999998865 468999999999999999999999985432211   11111111100000 


Q ss_pred             ----------cccc-------cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH--hcC
Q 005236          616 ----------SQLI-------DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM--LGS  662 (706)
Q Consensus       616 ----------~~~~-------d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~--L~~  662 (706)
                                ...+       +...... .......+.+++.+||+.+|++|||++|+++.  ++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         232 DLGFIRNEKARRYIRSLPYTPRQSFARL-FPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             HhhhcCchhhhHHHHhcCcccccCHHHH-cccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence                      0000       0000000 00112346789999999999999999999977  544

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=1.7e-33  Score=294.63  Aligned_cols=264  Identities=24%  Similarity=0.339  Sum_probs=195.7

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-----
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-----  456 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  456 (706)
                      ..++|++.+.||+|+||.||+|..+ +++.||+|++....  ......+.+|+.++++++||||+++++++.+..     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            4578999999999999999999985 47899999986432  233456788999999999999999999987655     


Q ss_pred             -----eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEe
Q 005236          457 -----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS  531 (706)
Q Consensus       457 -----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~  531 (706)
                           ..++|+||+++ +|...+...  ...+++..+..++.||+.||+|||+.+   |+|+||||+||++++++.+||+
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~  158 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLA  158 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeC
Confidence                 78999999986 666666433  245889999999999999999999987   9999999999999999999999


Q ss_pred             eeccccccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      |||++..+..... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.|+.....   ...........
T Consensus       159 dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~---~~~~~~~~~~~  234 (302)
T cd07864         159 DFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE---LAQLELISRLC  234 (302)
T ss_pred             cccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHh
Confidence            9999987643221 11122346778999998865 4578999999999999999999998753222   22222222211


Q ss_pred             hcCCC---ccccc--------------ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          611 NEGMP---SQLID--------------ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       611 ~~~~~---~~~~d--------------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .....   +.+..              ..+..... .....+.+++..||+.+|.+||++.+++..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFS-FIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             CCCChhhcccccccccccccccccccccchhhhcC-CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11110   00000              00000000 012356789999999999999999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=6.5e-34  Score=302.64  Aligned_cols=267  Identities=25%  Similarity=0.360  Sum_probs=196.4

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeC--Cee
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHG--EEK  458 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~  458 (706)
                      ..++|++.+.||+|+||.||+|.+. +++.+|||++..  ........+..|+.+++++ +||||+++++++...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            3468999999999999999999985 578899998854  2333455677899999999 999999999998654  367


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||++ ++|..++...    .+++..+..++.||+.||+|||+.+   |+|+||||+||++++++.+||+|||++..
T Consensus        85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852          85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence            99999997 5898888542    5788889999999999999999987   99999999999999999999999999987


Q ss_pred             cCCCCCc---ccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH-------
Q 005236          539 FGGDETE---GNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW-------  607 (706)
Q Consensus       539 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~-------  607 (706)
                      +......   .......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||......+....+....       
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~  236 (337)
T cd07852         157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED  236 (337)
T ss_pred             cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence            6433221   12233568899999998765 567899999999999999999999975433221111110000       


Q ss_pred             -HHhhcCCCccccccccc-CcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          608 -KLWNEGMPSQLIDACFK-DSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       608 -~~~~~~~~~~~~d~~~~-~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       ..+.......+++.... ......     ....+.+++.+||+.+|.+|||+.++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence             00000000001100000 000000     12356789999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=3.3e-33  Score=290.44  Aligned_cols=256  Identities=23%  Similarity=0.326  Sum_probs=198.7

Q ss_pred             CCCccceeccCCceeEEEEEeC----CCcEEEEEEcCccc----hhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCee
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKIS----EQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  458 (706)
                      +|++.+.||+|+||.||+++..    +++.||||.+....    ....+.+.+|+.++.++ +||||+++++.+..+...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4778899999999999999853    46789999886432    22345688999999999 599999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++++|.+++...   ..+++..+..++.|++++|.|||+.+   ++|+||+|+||+++.++.++|+|||+++.
T Consensus        81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~  154 (288)
T cd05583          81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE  154 (288)
T ss_pred             EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence            9999999999999998543   34788889999999999999999887   99999999999999999999999999887


Q ss_pred             cCCCCCcccccccccccCccCccccccCC--CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQ--FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      +...... ......++..|+|||.+.+..  .+.++||||||+++|||++|+.|+...........+  .......... 
T Consensus       155 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~-  230 (288)
T cd05583         155 FLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEI--SRRILKSKPP-  230 (288)
T ss_pred             ccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHH--HHHHHccCCC-
Confidence            5433211 122345789999999987655  788999999999999999999997543222111111  1111111100 


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                            .....+    ..+.+++.+||+.+|++|||++++.+.|+..
T Consensus       231 ------~~~~~~----~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         231 ------FPKTMS----AEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             ------CCcccC----HHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence                  001111    2356788999999999999999999988764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=3.8e-33  Score=285.69  Aligned_cols=242  Identities=24%  Similarity=0.335  Sum_probs=191.7

Q ss_pred             eccCCceeEEEEEeCC-CcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          395 LGEGGFGPVYKGTLAD-EQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       395 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      ||.|++|.||+++... ++.+++|.+....   ....+.+.+|+.++++++||||+++++.+.++...++||||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            6999999999999854 8899999986532   23456789999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccc
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR  550 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  550 (706)
                      .+++...   ..+++..+..++.||+.||+|||+.+   ++|+||+|+||+++.++.++|+|||+++......   ....
T Consensus        81 ~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~  151 (262)
T cd05572          81 WTILRDR---GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWT  151 (262)
T ss_pred             HHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccc
Confidence            9999653   34788899999999999999999987   9999999999999999999999999998764322   2223


Q ss_pred             cccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHH
Q 005236          551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLA  630 (706)
Q Consensus       551 ~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  630 (706)
                      ..++..|+|||.+....++.++|+||||+++|||++|+.|+.....+ .......   ............     .    
T Consensus       152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~---~~~~~~~~~~~~-----~----  218 (262)
T cd05572         152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED-PMEIYND---ILKGNGKLEFPN-----Y----  218 (262)
T ss_pred             ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC-HHHHHHH---HhccCCCCCCCc-----c----
Confidence            46788999999998888999999999999999999999998654321 1111111   111011100000     0    


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCC-----hhHHHH
Q 005236          631 EVIRCIHIGLLCVQQYPEDRPC-----MPSVIL  658 (706)
Q Consensus       631 ~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~  658 (706)
                      ....+.+++..||+.+|.+||+     ++|+++
T Consensus       219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             cCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            1235678999999999999999     555544

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-33  Score=286.50  Aligned_cols=245  Identities=23%  Similarity=0.225  Sum_probs=188.3

Q ss_pred             ceeccCCceeEEEEEeC-CCcEEEEEEcCccch---hhHHHHHHHHHH-HhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE---QGLKELKNEIIL-FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.||+|+||.||+|... +++.||+|.+.....   .....+..|..+ ....+||||+++++++..++..++||||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            57999999999999884 578999999865322   222334455544 4455899999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      ++|.+++...   ..+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||+++....      
T Consensus        82 ~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------  149 (260)
T cd05611          82 GDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------  149 (260)
T ss_pred             CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence            9999998543   34788999999999999999999987   99999999999999999999999999876432      


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                      .....++..|+|||.+.+..++.++||||||+++|||++|..|+.....   .......    ...... . ......  
T Consensus       150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~----~~~~~~-~-~~~~~~--  218 (260)
T cd05611         150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---DAVFDNI----LSRRIN-W-PEEVKE--  218 (260)
T ss_pred             cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHH----HhcccC-C-CCcccc--
Confidence            2234578899999999888899999999999999999999999753221   1111111    111100 0 000000  


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                        .....+.+++.+||+.+|.+||++.++.+.|..
T Consensus       219 --~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         219 --FCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             --cCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence              112346678999999999999998877776654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.4e-33  Score=281.76  Aligned_cols=247  Identities=28%  Similarity=0.433  Sum_probs=199.9

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch--hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE--QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|++.+.||+|++|.||+++.. .++.+++|.+.....  ...+.+.+|++++++++|||++++++++.+....++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4788899999999999999875 578899999876443  4567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++...   ..+++..+..++.|++.+|.|||+.+   ++|+||+|+||+++.++.++|+|||++........
T Consensus        81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  154 (254)
T cd06627          81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK  154 (254)
T ss_pred             CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence            9999999998544   45899999999999999999999887   99999999999999999999999999987643322


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                      .  .....++..|+|||......++.++||||+|+++|+|++|+.|+.....   ...   ....... ....+.     
T Consensus       155 ~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~---~~~---~~~~~~~-~~~~~~-----  220 (254)
T cd06627         155 D--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP---MAA---LFRIVQD-DHPPLP-----  220 (254)
T ss_pred             c--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH---HHH---HHHHhcc-CCCCCC-----
Confidence            1  2234678899999999888899999999999999999999999753221   111   1111111 111111     


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ...    ...+.+++.+||+.+|++||++.+++.
T Consensus       221 ~~~----~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         221 EGI----SPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CCC----CHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            111    124567889999999999999999975

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-33  Score=291.41  Aligned_cols=260  Identities=26%  Similarity=0.352  Sum_probs=198.2

Q ss_pred             CCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch--hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          389 FSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE--QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      |++.+.||+|++|.||++... +++.+++|++.....  .....+..|+.++++++|+||+++++++..+...++||||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            567789999999999999985 588899999865322  34567888999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++ +|.+++....  ..+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||.+.......  
T Consensus        81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--  152 (283)
T cd05118          81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--  152 (283)
T ss_pred             CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--
Confidence            75 8888875533  45889999999999999999999988   9999999999999999999999999998765433  


Q ss_pred             ccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC---Cccccc-
Q 005236          546 GNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM---PSQLID-  620 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d-  620 (706)
                      .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||.....   .+.+...........   ...+.+ 
T Consensus       153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  229 (283)
T cd05118         153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE---IDQLFKIFRTLGTPDPEVWPKFTSL  229 (283)
T ss_pred             ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHcCCCchHhcccchhh
Confidence            112224577889999998876 789999999999999999999988754332   222222111111110   000000 


Q ss_pred             -----ccc--cCcCC-----HHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          621 -----ACF--KDSFN-----LAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       621 -----~~~--~~~~~-----~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                           ...  .....     ......+.+++..||+.+|.+||++++++..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                 000  00000     1123467789999999999999999999863

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=7.1e-33  Score=284.47  Aligned_cols=248  Identities=22%  Similarity=0.268  Sum_probs=188.2

Q ss_pred             HHHHhccCCCcccee--ccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCC
Q 005236          381 TIANATDNFSINKKL--GEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGE  456 (706)
Q Consensus       381 ~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  456 (706)
                      +.....++|++.+.+  |+|+||.||++..+ ++..+|+|.+......   ..  |+.....+ +||||+++++.+...+
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~--e~~~~~~~~~h~~iv~~~~~~~~~~   82 (267)
T PHA03390          8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---AI--EPMVHQLMKDNPNFIKLYYSVTTLK   82 (267)
T ss_pred             HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---hh--hHHHHHHhhcCCCEEEEEEEEecCC
Confidence            344455677787777  99999999999974 5778899987543211   11  22222222 7999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-CeEEeeecc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGL  535 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfgl  535 (706)
                      ..++||||+++++|.+++....   .+++..+..++.||++||.|||+.+   ++||||||+||+++.++ .++|+|||+
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~  156 (267)
T PHA03390         83 GHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGL  156 (267)
T ss_pred             eeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence            9999999999999999996543   6899999999999999999999988   99999999999999998 999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      ++.....      ....++..|+|||++.+..++.++||||||+++|||++|+.||....... ....... ... ....
T Consensus       157 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~-~~~-~~~~  227 (267)
T PHA03390        157 CKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLL-KRQ-QKKL  227 (267)
T ss_pred             ceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHH-Hhh-cccC
Confidence            8865322      12457899999999999999999999999999999999999986332221 1111111 111 1100


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-hhHHHH
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-MPSVIL  658 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-~~ev~~  658 (706)
                       ....         .....+.+++..||+.+|.+||+ ++++++
T Consensus       228 -~~~~---------~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        228 -PFIK---------NVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             -Cccc---------ccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence             1110         11224567889999999999996 688874

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=7.2e-33  Score=282.34  Aligned_cols=251  Identities=24%  Similarity=0.377  Sum_probs=202.9

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|.+.+.||+|+||.||++... +++.+++|++....  ....+.+.+|+++++.++|||++++++.+..+...++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4788899999999999999985 58899999986542  35567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      +++++|.+++.... ....+++..+..++.+++.||.|||+.+   ++|+||+|+||++++++.++|+|||++.......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            99999999996532 2356899999999999999999999987   9999999999999999999999999998764432


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                        .......+++.|+|||.+....++.++||||+|+++++|++|+.|+....   .......   . .......+..   
T Consensus       158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~---~~~~~~~---~-~~~~~~~~~~---  225 (258)
T cd08215         158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN---LLELALK---I-LKGQYPPIPS---  225 (258)
T ss_pred             --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc---HHHHHHH---H-hcCCCCCCCC---
Confidence              12223468889999999998899999999999999999999999975432   1111111   1 1111111111   


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        .    ....+.+++.+||+.+|.+||++.|+++.
T Consensus       226 --~----~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         226 --Q----YSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             --C----CCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence              1    11345678999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=5.3e-33  Score=287.36  Aligned_cols=242  Identities=26%  Similarity=0.317  Sum_probs=184.1

Q ss_pred             eeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHH---hhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          394 KLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILF---SKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       394 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      .||+|+||.||++... +++.+|+|.+....   ......+.+|..++   ...+||||+.+++.+...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999985 47899999885421   12222334444433   33479999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++..+   ..+++..+..++.|++.||+|||+.+   ++||||||+|||+++++.++|+|||++......    
T Consensus        81 ~~~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~----  150 (279)
T cd05633          81 GGDLHYHLSQH---GVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK----  150 (279)
T ss_pred             CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceecccc----
Confidence            99999988643   34899999999999999999999988   999999999999999999999999998765322    


Q ss_pred             cccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......|+..|+|||.+.. ..++.++|||||||++|||++|+.||.......... +...   ... ....+     ..
T Consensus       151 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~---~~~-~~~~~-----~~  220 (279)
T cd05633         151 KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRM---TLT-VNVEL-----PD  220 (279)
T ss_pred             CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHH---hhc-CCcCC-----cc
Confidence            1223468999999999864 568999999999999999999999986443322111 1111   000 00011     11


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVILM  659 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~~  659 (706)
                      ..    ...+.+++..||+.||.+||     +++|+++.
T Consensus       221 ~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         221 SF----SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             cc----CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            11    22456788999999999999     59999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=4.5e-33  Score=294.93  Aligned_cols=261  Identities=23%  Similarity=0.317  Sum_probs=191.6

Q ss_pred             ceeccC--CceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEG--GFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      ..||+|  +||+||+++.. .++.||+|.+..  ......+.+.+|+.+++.++||||+++++++..++..++||||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            567777  89999999984 689999999864  2334457889999999999999999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc-
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-  546 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~-  546 (706)
                      ++|.+++..... ..+++..+..++.||+.||+|||+.+   ++||||||+|||++.++.++++||+.+.......... 
T Consensus        84 ~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~  159 (328)
T cd08226          84 GSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK  159 (328)
T ss_pred             CCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence            999999865432 34788888999999999999999887   9999999999999999999999998654332111110 


Q ss_pred             ----cccccccccCccCccccccC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHH-----------
Q 005236          547 ----NTNRVVGTYGYMAPEYASDG--QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL-----------  609 (706)
Q Consensus       547 ----~~~~~~gt~~y~aPE~~~~~--~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-----------  609 (706)
                          ......++..|+|||++.+.  .++.++||||||+++|||++|+.||.......  .........           
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  237 (328)
T cd08226         160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFP  237 (328)
T ss_pred             ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccc
Confidence                11112346679999999764  57899999999999999999999985432211  000000000           


Q ss_pred             ------------h---------hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          610 ------------W---------NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       610 ------------~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                                  .         .........+..+...........+.+++.+||+.||++|||+.|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~  308 (328)
T cd08226         238 CEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH  308 (328)
T ss_pred             hhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence                        0         0000000111111111122234567899999999999999999999853

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=3e-33  Score=291.14  Aligned_cols=244  Identities=24%  Similarity=0.388  Sum_probs=194.5

Q ss_pred             cceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          392 NKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      ..+||+|+||.||++... +++.||||++........+.+.+|+.+++.++|+||+++++.+..++..++||||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            368999999999999884 6889999998655555567789999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccc
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR  550 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  550 (706)
                      .+++..    ..+++..+..++.|++.+|+|||+.+   ++|+||+|+||++++++.++|+|||++........  ....
T Consensus       105 ~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~  175 (292)
T cd06657         105 TDIVTH----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKS  175 (292)
T ss_pred             HHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccccc--cccc
Confidence            998743    23788899999999999999999987   99999999999999999999999999876533221  1223


Q ss_pred             cccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHH
Q 005236          551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLA  630 (706)
Q Consensus       551 ~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  630 (706)
                      ..++..|+|||.+.+..++.++||||||+++|||++|..|+.....   ........    ......+..  + ...   
T Consensus       176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~---~~~~~~~~----~~~~~~~~~--~-~~~---  242 (292)
T cd06657         176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---LKAMKMIR----DNLPPKLKN--L-HKV---  242 (292)
T ss_pred             cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHH----hhCCcccCC--c-ccC---
Confidence            4678999999999888899999999999999999999999753221   11111111    111111100  0 001   


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          631 EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       631 ~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ...+.+++.+||+.+|.+||++.++++
T Consensus       243 -~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         243 -SPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             -CHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence             123557888999999999999999887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=1.1e-33  Score=289.63  Aligned_cols=247  Identities=25%  Similarity=0.323  Sum_probs=196.3

Q ss_pred             eccCCceeEEEEEeCC-CcEEEEEEcCccch---hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          395 LGEGGFGPVYKGTLAD-EQEIAVKRLSKISE---QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       395 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      ||+|+||.||+++... ++.+++|.+.....   ...+.+.+|+.++++++||||+++++.+..+...++||||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999865 88999999865433   4567889999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC------
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET------  544 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~------  544 (706)
                      .+++....   .+++..+..++.||+.||+|||+.+   ++|+||+|+||++++++.++|+|||++........      
T Consensus        81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  154 (265)
T cd05579          81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD  154 (265)
T ss_pred             HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence            99996533   5889999999999999999999987   99999999999999999999999999886533211      


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                      ........++..|+|||.+.....+.++||||||+++|||++|+.||......   .....   .. .+... ...    
T Consensus       155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~---~~-~~~~~-~~~----  222 (265)
T cd05579         155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE---EIFQN---IL-NGKIE-WPE----  222 (265)
T ss_pred             cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHH---Hh-cCCcC-CCc----
Confidence            11223356788999999998888999999999999999999999997543211   11111   11 11110 000    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                       ..  .....+.+++.+||+.+|.+|||+.++.+.|+.
T Consensus       223 -~~--~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         223 -DV--EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             -cc--cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence             00  012345678999999999999999888887764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=7.7e-34  Score=316.65  Aligned_cols=256  Identities=27%  Similarity=0.407  Sum_probs=192.9

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEe------
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIH------  454 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------  454 (706)
                      .+...+|+..+.||+||||.|||++.+ ||+.||||++... +......+.+|+.++++|+|||||+++..+.+      
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            456678999999999999999999984 7999999998653 44556678999999999999999999753211      


Q ss_pred             --------------------------------------------------------------------------------
Q 005236          455 --------------------------------------------------------------------------------  454 (706)
Q Consensus       455 --------------------------------------------------------------------------------  454 (706)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------C--------CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHH
Q 005236          455 -------------------------G--------EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY  501 (706)
Q Consensus       455 -------------------------~--------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~  501 (706)
                                               +        ..+||-||||+..+|.+++.++.-..  .....++++.+|++||.|
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY  712 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY  712 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence                                     0        12367799999999999886654321  456788999999999999


Q ss_pred             HHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC---C-------------CCCcccccccccccCccCcccccc
Q 005236          502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG---G-------------DETEGNTNRVVGTYGYMAPEYASD  565 (706)
Q Consensus       502 LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~---~-------------~~~~~~~~~~~gt~~y~aPE~~~~  565 (706)
                      +|+++   ||||||||.||+++++..+||+|||+|....   .             .......+..+||.-|+|||++.+
T Consensus       713 IH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  713 IHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             HHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            99998   9999999999999999999999999998721   0             011113345689999999999976


Q ss_pred             CC---CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHh
Q 005236          566 GQ---FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLC  642 (706)
Q Consensus       566 ~~---~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~c  642 (706)
                      ..   |+.|+|+||||||++||+.   ||..     ..+.+... ..++.+..+.-      ..+...+...-.+++.++
T Consensus       790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T-----sMERa~iL-~~LR~g~iP~~------~~f~~~~~~~e~slI~~L  854 (1351)
T KOG1035|consen  790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGT-----SMERASIL-TNLRKGSIPEP------ADFFDPEHPEEASLIRWL  854 (1351)
T ss_pred             cccccccchhhhHHHHHHHHHHhc---cCCc-----hHHHHHHH-HhcccCCCCCC------cccccccchHHHHHHHHH
Confidence            54   9999999999999999985   3321     11222221 22223332221      111223344456799999


Q ss_pred             cCCCCCCCCChhHHHH
Q 005236          643 VQQYPEDRPCMPSVIL  658 (706)
Q Consensus       643 l~~~p~~RPt~~ev~~  658 (706)
                      ++.||.+|||+.|++.
T Consensus       855 l~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  855 LSHDPSKRPTATELLN  870 (1351)
T ss_pred             hcCCCccCCCHHHHhh
Confidence            9999999999999874

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=8.6e-34  Score=301.27  Aligned_cols=264  Identities=20%  Similarity=0.312  Sum_probs=196.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEe----CCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIH----GEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~  458 (706)
                      .++|++.+.||+|+||.||+|... .++.||+|++....  ....+.+.+|+.++++++||||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            368999999999999999999975 58899999986532  2345677889999999999999999988763    3467


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+. ++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+||++++++.+||+|||+++.
T Consensus        84 ~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~  156 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSD---QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG  156 (334)
T ss_pred             EEEEehhh-hhHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccccee
Confidence            99999996 5898888543   34899999999999999999999987   99999999999999999999999999987


Q ss_pred             cCCCCCcc--cccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          539 FGGDETEG--NTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       539 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      ........  ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......   ..+........ ...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~---~~~~~~~~~~g-~~~  232 (334)
T cd07855         157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV---HQLKLILSVLG-SPS  232 (334)
T ss_pred             ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH---HHHHHHHHHhC-CCh
Confidence            54322211  1123468899999999866 46889999999999999999999998543221   11111111100 000


Q ss_pred             cccccc------------c-ccCcCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          616 SQLIDA------------C-FKDSFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       616 ~~~~d~------------~-~~~~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                      .++++.            . .......     .....+.+++..||+.+|.+||++++++..-
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~  295 (334)
T cd07855         233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP  295 (334)
T ss_pred             hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence            000000            0 0000111     1134577899999999999999999988743

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=8.9e-33  Score=287.49  Aligned_cols=251  Identities=24%  Similarity=0.310  Sum_probs=192.7

Q ss_pred             CCCccceeccCCceeEEEEEe----CCCcEEEEEEcCccc----hhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCee
Q 005236          388 NFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSKIS----EQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  458 (706)
                      +|++.+.||+|+||.||+++.    .+|+.||+|++....    ....+.+.+|+.++.++ +|+||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            478889999999999999986    367899999986532    22346788899999999 599999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++++|.+++...   ..+++..+..++.|+++||.|||+.+   ++||||+|+|||+++++.+||+|||++..
T Consensus        81 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~  154 (290)
T cd05613          81 HLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE  154 (290)
T ss_pred             EEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence            9999999999999998643   34778888899999999999999987   99999999999999999999999999987


Q ss_pred             cCCCCCcccccccccccCccCccccccC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDG--QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      ....... ......|+..|+|||.+...  .++.++||||||+++|+|++|+.|+...........+  .......... 
T Consensus       155 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~--~~~~~~~~~~-  230 (290)
T cd05613         155 FHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEI--SRRILKSEPP-  230 (290)
T ss_pred             ccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHH--HHHhhccCCC-
Confidence            5432211 22235688999999998753  4688999999999999999999997543222111111  1111111110 


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHH
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVIL  658 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~  658 (706)
                       .     ....    ...+.+++..||+.+|.+||     ++.+++.
T Consensus       231 -~-----~~~~----~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         231 -Y-----PQEM----SALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             -C-----CccC----CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence             0     0011    12456788999999999997     5565554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=6.4e-33  Score=282.70  Aligned_cols=249  Identities=27%  Similarity=0.382  Sum_probs=201.6

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|++.++||+|+||.||+++.. +++.+++|++...  .......+.+|+.++++++||||+++++++.+....++||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            4788899999999999999874 5788999998653  334456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      +++++|.+++.+.. ....+++..++.++.|++.||+|||+.+   ++|+||+|.||++++++.+||+|||+++..... 
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-  156 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN-  156 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence            99999999986532 2355889999999999999999999987   999999999999999999999999999876443 


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                         ......++..|+|||.+.+..++.++|+||||+++|||++|+.|+.....   ......    ........+.    
T Consensus       157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~----~~~~~~~~~~----  222 (256)
T cd08530         157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM---QDLRYK----VQRGKYPPIP----  222 (256)
T ss_pred             ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH----HhcCCCCCCc----
Confidence               12224578899999999999999999999999999999999999754321   111111    1111111111    


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                           ......+.+++..|++.+|.+||++.++++.
T Consensus       223 -----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         223 -----PIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             -----hhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                 1122356789999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.3e-33  Score=296.59  Aligned_cols=247  Identities=23%  Similarity=0.367  Sum_probs=202.9

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      -...|.+.+.||+|.|+.|.+|+.. .+..||||.+.+.  +....+.+.+|+++|..++|||||+++.+.+....+|+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            3467999999999999999999974 5889999999764  334445688999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+.+|.+.++|..+..   +.......++.|+..|++|+|+++   |+|||||++||||+.+.++||+|||++..+..
T Consensus       134 ~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~  207 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDY  207 (596)
T ss_pred             EEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecc
Confidence            999999999999977654   444777889999999999999998   99999999999999999999999999998742


Q ss_pred             CCCcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                         .......+|++.|.|||++.+..+ .+++|+||+|++||-|+.|..||+...-                   .++-+
T Consensus       208 ---~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-------------------k~Lr~  265 (596)
T KOG0586|consen  208 ---GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-------------------KELRP  265 (596)
T ss_pred             ---cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-------------------ccccc
Confidence               233445789999999999998876 4789999999999999999999864221                   22222


Q ss_pred             ccccCcCCHH--HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          621 ACFKDSFNLA--EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       621 ~~~~~~~~~~--~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..+.+.+.+.  ---.+-+++..+|-.+|.+|++++++.+.
T Consensus       266 rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  266 RVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             hheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence            2222211111  11245578889999999999999999753

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=4.4e-33  Score=290.71  Aligned_cols=252  Identities=24%  Similarity=0.387  Sum_probs=192.2

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc-hhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS-EQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.+.||+|+||.||+|..++ ++.||||.+.... .....++..|+.++.+.. ||||+++++++.+....++|||
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            678899999999999999999865 8899999986532 233456677777777775 9999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      |+++ +|.+++....  ..+++..+..++.||+.||+|||+. +   |+||||+|+||++++++.+||+|||++..+...
T Consensus        95 ~~~~-~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~  168 (296)
T cd06618          95 LMST-CLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDS  168 (296)
T ss_pred             ccCc-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence            9854 6777664422  3688999999999999999999974 5   999999999999999999999999999765332


Q ss_pred             CCcccccccccccCccCccccccCC----CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQ----FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ..   .....++..|+|||.+....    ++.++||||||+++|||++|+.||......  .....   ...... ...+
T Consensus       169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~---~~~~~~-~~~~  239 (296)
T cd06618         169 KA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLT---KILQEE-PPSL  239 (296)
T ss_pred             Cc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHH---HHhcCC-CCCC
Confidence            21   12235788999999987554    889999999999999999999997532111  11111   111111 1111


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                      ...     .  .....+.+++.+||+.+|.+||+++++++..
T Consensus       240 ~~~-----~--~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~  274 (296)
T cd06618         240 PPN-----E--GFSPDFCSFVDLCLTKDHRKRPKYRELLQHP  274 (296)
T ss_pred             CCC-----C--CCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence            100     0  1123467889999999999999999998653

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-34  Score=301.65  Aligned_cols=204  Identities=29%  Similarity=0.443  Sum_probs=177.1

Q ss_pred             CCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC------eeE
Q 005236          388 NFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE------EKL  459 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~  459 (706)
                      -|...+.||+|+||.||+|+. ..|+.||||.+... .....+...+|++++++++|||||++++.-.+..      ...
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            355668999999999999996 55999999998763 3445678889999999999999999999865543      568


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc--CCC--CeEEeeecc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD--QDM--NPKISDFGL  535 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~--~~~--~~kl~Dfgl  535 (706)
                      +|||||.+|+|...|.+.++..-+++.+.+.++..++.||.|||+++   |+||||||.||++-  ++|  .-||+|||.
T Consensus        94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~  170 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGA  170 (732)
T ss_pred             EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccc
Confidence            99999999999999998888888999999999999999999999988   99999999999984  334  479999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccc-cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYAS-DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSD  597 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~  597 (706)
                      |+.+..+.   .....+||..|++||... ...|+..+|.|||||++||.+||..||......
T Consensus       171 Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p  230 (732)
T KOG4250|consen  171 ARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP  230 (732)
T ss_pred             cccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence            99875443   445578999999999998 488999999999999999999999998765443

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-33  Score=288.51  Aligned_cols=259  Identities=23%  Similarity=0.299  Sum_probs=194.2

Q ss_pred             CCccceeccCCceeEEEEEeCC-CcEEEEEEcCccch-hhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEecC
Q 005236          389 FSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISE-QGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      |.+.+.||+|++|.||+|+..+ ++.|+||++..... .......+|+..+++++ ||||+++++++..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            5678999999999999999854 78899999865322 22334557899999999 999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                       +++|.+++.... ...+++..+..++.|++.+|.|||+.+   ++|+||+|+||++++++.++|+|||++.......  
T Consensus        81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--  153 (283)
T cd07830          81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--  153 (283)
T ss_pred             -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC--
Confidence             889998886543 245899999999999999999999987   9999999999999999999999999998653321  


Q ss_pred             ccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC-----------
Q 005236          546 GNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG-----------  613 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~-----------  613 (706)
                       ......++..|+|||++.. ..++.++|+||||++++||++|+.|+......+.   ...........           
T Consensus       154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  229 (283)
T cd07830         154 -PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQ---LYKICSVLGTPTKQDWPEGYKL  229 (283)
T ss_pred             -CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHH---HHHHHHhcCCCChhhhhhHhhh
Confidence             1123457889999998854 5689999999999999999999988754332111   11111100000           


Q ss_pred             --CCccccccc----ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 --MPSQLIDAC----FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 --~~~~~~d~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        .....+...    +..... .....+.+++..||+.+|++|||++|++..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         230 ASKLGFRFPQFAPTSLHQLIP-NASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             hccccccccccccccHHHHcc-cCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence              000000000    000000 012457789999999999999999999764

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-32  Score=280.93  Aligned_cols=250  Identities=26%  Similarity=0.368  Sum_probs=194.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-----chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--Cee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-----SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEK  458 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  458 (706)
                      .+|.+.+.||+|+||.||+|++. +++.+++|.+...     .......+.+|+.++++++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            47889999999999999999974 4889999987431     234456888999999999999999999998764  457


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++|+||+++++|.+++...   ..+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAY---GALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence            8999999999999998543   34788889999999999999999988   99999999999999999999999999986


Q ss_pred             cCCCCC-cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          539 FGGDET-EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       539 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ...... ........++..|+|||.+.+..++.++||||||+++|||++|+.||....   ....+   .+....+....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~---~~~~~~~~~~~  229 (264)
T cd06653         156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE---AMAAI---FKIATQPTKPM  229 (264)
T ss_pred             cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC---HHHHH---HHHHcCCCCCC
Confidence            532111 111123468899999999998889999999999999999999999975321   11111   11111111111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      + .        ..-...+.+++.+|++ +|.+||+..+++.
T Consensus       230 ~-p--------~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         230 L-P--------DGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             C-C--------cccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            1 1        1111346678889999 5799999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=8.8e-33  Score=290.98  Aligned_cols=263  Identities=22%  Similarity=0.232  Sum_probs=192.6

Q ss_pred             CccceeccCCceeEEEEEeCCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          390 SINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      .+.+.+|.|+++.||++.. +++.||||++...  .....+.+.+|+.+++.++||||+++++++.+.+..+++|||+++
T Consensus         5 ~i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~   83 (314)
T cd08216           5 LIGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY   83 (314)
T ss_pred             hhhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence            3445566666666666655 6889999998653  455667899999999999999999999999999999999999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC---
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET---  544 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~---  544 (706)
                      ++|.+++..... ..+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||.+..+.....   
T Consensus        84 ~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~  159 (314)
T cd08216          84 GSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR  159 (314)
T ss_pred             CCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence            999999965432 34788888999999999999999988   99999999999999999999999999876532211   


Q ss_pred             --cccccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh----cC---
Q 005236          545 --EGNTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN----EG---  613 (706)
Q Consensus       545 --~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~----~~---  613 (706)
                        ........++..|+|||++..  ..++.++||||||+++|||++|+.||......  ............    ..   
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~  237 (314)
T cd08216         160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKVRGTVPCLLDKSTYP  237 (314)
T ss_pred             ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCccccccCchh
Confidence              111223457788999999876  35889999999999999999999998643221  111111110000    00   


Q ss_pred             ----CCcc----cccccc----cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 ----MPSQ----LIDACF----KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 ----~~~~----~~d~~~----~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          ....    ..++..    ...........+.+++.+||+.+|++|||++++++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence                0000    000000    000111122356789999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=6e-33  Score=295.01  Aligned_cols=263  Identities=22%  Similarity=0.289  Sum_probs=194.3

Q ss_pred             cCCC-ccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhh--------------HHHHHHHHHHHhhcCCcceeeeEe
Q 005236          387 DNFS-INKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQG--------------LKELKNEIILFSKLQHRNLVKLLG  450 (706)
Q Consensus       387 ~~~~-~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~  450 (706)
                      ++|. +.+.||+|+||.||+|... .++.||||++.......              ...+.+|+.++++++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            4565 4577999999999999975 58899999885432111              125778999999999999999999


Q ss_pred             EEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       451 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                      ++..++..++||||++ ++|.+++...   ..+++.....++.|++.||+|||+.+   ++|+||+|+||+++.++.+||
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl  160 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKI  160 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEE
Confidence            9999999999999997 5898888542   34788999999999999999999987   999999999999999999999


Q ss_pred             eeeccccccCCCCC------------cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCC
Q 005236          531 SDFGLARAFGGDET------------EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSD  597 (706)
Q Consensus       531 ~Dfgla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~  597 (706)
                      +|||+++.......            ........++..|+|||.+.+. .++.++||||||+++|||++|+.|+......
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~  240 (335)
T PTZ00024        161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI  240 (335)
T ss_pred             CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            99999987642111            1111123467889999998764 4789999999999999999999997644322


Q ss_pred             CchhHHHHHHHHhhcCCC---cccc------------cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          598 NKLNLIRHAWKLWNEGMP---SQLI------------DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       598 ~~~~~~~~~~~~~~~~~~---~~~~------------d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                         ...............   ....            ........ ......+.+++..||+.+|++||+++|++..-
T Consensus       241 ---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~  314 (335)
T PTZ00024        241 ---DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIF-PNASDDAIDLLQSLLKLNPLERISAKEALKHE  314 (335)
T ss_pred             ---HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhC-cCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence               222222111111100   0000            00000000 01123467899999999999999999998643

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-33  Score=314.38  Aligned_cols=260  Identities=31%  Similarity=0.429  Sum_probs=205.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC--------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHG  455 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  455 (706)
                      .++..+.+.||+|.||.|++|....        ...||||.++.. .....+.+..|+.+|+.+ +||||+.++|+|..+
T Consensus       295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~  374 (609)
T KOG0200|consen  295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD  374 (609)
T ss_pred             hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence            3455677799999999999998531        457999998753 345678899999999998 699999999999999


Q ss_pred             CeeEEEEecCCCCChhhhhhccc-----cc--------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQE-----RC--------KLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~-----~~--------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                      ...++|+||++.|+|.++|+...     ..        ..+.....+.++.|||.||+||++..   +|||||.++||||
T Consensus       375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi  451 (609)
T KOG0200|consen  375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLI  451 (609)
T ss_pred             CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEe
Confidence            99999999999999999997654     00        23888999999999999999999887   9999999999999


Q ss_pred             cCCCCeEEeeeccccccCCCCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCch
Q 005236          523 DQDMNPKISDFGLARAFGGDETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKL  600 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~  600 (706)
                      .++..+||+|||+|+......... ......-+..|||||.+....|+.|+|||||||+||||+| |..|+.....  ..
T Consensus       452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~--~~  529 (609)
T KOG0200|consen  452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP--TE  529 (609)
T ss_pred             cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc--HH
Confidence            999999999999999765444332 2111114567999999999999999999999999999999 6677543111  11


Q ss_pred             hHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          601 NLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ++.    +.++++...+...         ....++.+++..||+.+|++||++.++++.++..
T Consensus       530 ~l~----~~l~~G~r~~~P~---------~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  530 ELL----EFLKEGNRMEQPE---------HCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             HHH----HHHhcCCCCCCCC---------CCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            222    2233333222211         1233566899999999999999999999999884

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-32  Score=285.42  Aligned_cols=259  Identities=23%  Similarity=0.316  Sum_probs=192.9

Q ss_pred             CCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc--hhhHHHHHHHHHHHhhc---CCcceeeeEeEEEeCCe-----
Q 005236          389 FSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS--EQGLKELKNEIILFSKL---QHRNLVKLLGCCIHGEE-----  457 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~-----  457 (706)
                      |++.+.||+|+||.||+|+.+. ++.+|+|++....  ......+.+|+.++.++   +||||+++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            5678999999999999999865 8899999986422  22234566787777665   59999999999988776     


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .+++|||+++ +|.+++..... ..+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++.+||+|||++.
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence            8999999975 79888865332 35889999999999999999999987   9999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC--
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP--  615 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--  615 (706)
                      .+.....   .....++..|+|||++.+..++.++||||||+++|||++|+.|+......   +..............  
T Consensus       156 ~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  229 (287)
T cd07838         156 IYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA---DQLDKIFDVIGLPSEEE  229 (287)
T ss_pred             eccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH---HHHHHHHHHcCCCChHh
Confidence            7643321   12235788999999999999999999999999999999999887543221   222222111110000  


Q ss_pred             --------cccccccccCc---CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          616 --------SQLIDACFKDS---FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       616 --------~~~~d~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                              ...........   ........+.+++.+||+.+|.+||++++++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence                    00000000000   00112245668999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=2.7e-33  Score=289.43  Aligned_cols=249  Identities=28%  Similarity=0.374  Sum_probs=199.6

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|.+.+.||+|+||.||+|+.. +++.+++|.+...   .....+.+..|+.++++++ ||||+++++++...+..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            47889999999999999999985 6889999988652   2344567889999999998 99999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...   ..+++..++.++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          81 LEYAPNGELLQYIRKY---GSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             EcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            9999999999999654   35899999999999999999999988   99999999999999999999999999987643


Q ss_pred             CCCc------------------ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHH
Q 005236          542 DETE------------------GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI  603 (706)
Q Consensus       542 ~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~  603 (706)
                      ....                  .......++..|+|||++....++.++||||||++++++++|+.|+.....   ....
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~  231 (280)
T cd05581         155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE---YLTF  231 (280)
T ss_pred             ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH---HHHH
Confidence            3211                  122334678999999999888899999999999999999999999764331   1111


Q ss_pred             HHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh----hHHHH
Q 005236          604 RHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM----PSVIL  658 (706)
Q Consensus       604 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~----~ev~~  658 (706)
                      .....  .......        ..    ...+.+++.+||+.+|.+||++    +++++
T Consensus       232 ~~~~~--~~~~~~~--------~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         232 QKILK--LEYSFPP--------NF----PPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHh--cCCCCCC--------cc----CHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            11110  0000000        11    2346689999999999999999    66654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.8e-33  Score=296.93  Aligned_cols=262  Identities=25%  Similarity=0.339  Sum_probs=199.5

Q ss_pred             CCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-----eeE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-----EKL  459 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~  459 (706)
                      +|.+.+.||+|++|.||+|+... ++.++||++....  ....+.+.+|+.+++.++||||+++++++....     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            57888999999999999999854 8899999987643  444578899999999999999999999988775     789


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +||||++ ++|.+++....   .+++..+..++.||+.||+|||+.+   |+|+||||.|||++.++.++|+|||++...
T Consensus        81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence            9999998 48888885432   6889999999999999999999988   999999999999999999999999999876


Q ss_pred             CCCCCc-ccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC--
Q 005236          540 GGDETE-GNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP--  615 (706)
Q Consensus       540 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--  615 (706)
                      ...... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+.   .............  
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~  230 (330)
T cd07834         154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ---LNLIVEVLGTPSEED  230 (330)
T ss_pred             cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH---HHHHHHhcCCCChhH
Confidence            443210 122334678899999999887 899999999999999999999999854432211   1111111100000  


Q ss_pred             ---------cccccc-cccCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 ---------SQLIDA-CFKDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ---------~~~~d~-~~~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                               ...+.. .........     ....+.+++..||+.+|.+||+++++++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH  289 (330)
T ss_pred             hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                     000000 000000000     12346789999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-33  Score=277.38  Aligned_cols=264  Identities=24%  Similarity=0.361  Sum_probs=212.2

Q ss_pred             HHHHHhccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEE
Q 005236          380 ATIANATDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCC  452 (706)
Q Consensus       380 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  452 (706)
                      .++....++++....+-+|.||.||.|.+.      +.+.|.+|.++. .+..+...+..|.-++..+.|||+..+.+++
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            445555677888899999999999999663      345678888765 4555677889999999999999999999999


Q ss_pred             EeC-CeeEEEEecCCCCChhhhhh-----cccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC
Q 005236          453 IHG-EEKLLIYEFMPNKSLDSFIF-----DQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM  526 (706)
Q Consensus       453 ~~~-~~~~lV~e~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~  526 (706)
                      .+. ...+++|.++.-|+|..||.     +......++-.+...++.|++.|++|||.++   +||.||.++|++|++..
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~L  433 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQL  433 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhhe
Confidence            865 46789999999999999997     4455566778888999999999999999988   99999999999999999


Q ss_pred             CeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHH
Q 005236          527 NPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRH  605 (706)
Q Consensus       527 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~  605 (706)
                      ++||+|=.+++.+-+.+.......-..+..||+||.+.+..|+.++|||||||+||||+| |+.|+...++.+.   ..+
T Consensus       434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm---~~y  510 (563)
T KOG1024|consen  434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM---EHY  510 (563)
T ss_pred             eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH---HHH
Confidence            999999999998766555544444456789999999999999999999999999999998 8888765444322   222


Q ss_pred             HHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       606 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ..    ++.       ++...++  ...++..++.-||...|++||+.++++.-|..
T Consensus       511 lk----dGy-------RlaQP~N--CPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  511 LK----DGY-------RLAQPFN--CPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             Hh----ccc-------eecCCCC--CcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence            11    111       1111222  23356678889999999999999999998864

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7e-33  Score=295.42  Aligned_cols=264  Identities=23%  Similarity=0.318  Sum_probs=196.2

Q ss_pred             HHHHHHhccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC
Q 005236          379 LATIANATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG  455 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  455 (706)
                      ..++....++|.+.+.||+|+||.||+|.. .+++.||+|++...  .....+.+.+|+.++++++||||+++++++...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            345666779999999999999999999987 46889999998653  233356788899999999999999999988643


Q ss_pred             ------CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeE
Q 005236          456 ------EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPK  529 (706)
Q Consensus       456 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~k  529 (706)
                            ...+++++++ +++|.+++..    ..+++..+..++.|+++||+|||+.+   ++||||||+||++++++.+|
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~k  160 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELK  160 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEE
Confidence                  3457788876 7899887743    24789999999999999999999988   99999999999999999999


Q ss_pred             EeeeccccccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHH
Q 005236          530 ISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK  608 (706)
Q Consensus       530 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  608 (706)
                      |+|||+++....     ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......   ........
T Consensus       161 l~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~---~~~~~~~~  232 (345)
T cd07877         161 ILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI---DQLKLILR  232 (345)
T ss_pred             Eecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHH
Confidence            999999876422     1223467889999999866 56889999999999999999999997532221   11111111


Q ss_pred             HhhcCCCcccccccc-----------c--CcCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          609 LWNEGMPSQLIDACF-----------K--DSFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       609 ~~~~~~~~~~~d~~~-----------~--~~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ... .....+.....           .  .....     .....+.+++..||+.+|.+||++.+++..
T Consensus       233 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         233 LVG-TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HhC-CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            000 00000000000           0  00000     012246689999999999999999998865

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1.4e-32  Score=290.87  Aligned_cols=264  Identities=23%  Similarity=0.327  Sum_probs=194.9

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEe-CCee
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIH-GEEK  458 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~  458 (706)
                      ...+++|++.+.||+|+||.||++... +++.||||++...  .....+.+.+|+.++++++||||+++++++.. ....
T Consensus         6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI   85 (328)
T ss_pred             eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence            345688999999999999999999875 6889999987542  22345678899999999999999999999876 5678


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+ +++|..++..    ..+++.....++.|+++||+|||+.+   ++|+||+|+||++++++.+||+|||++..
T Consensus        86 ~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~  157 (328)
T cd07856          86 YFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI  157 (328)
T ss_pred             EEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccc
Confidence            9999998 5689888743    24677888889999999999999987   99999999999999999999999999875


Q ss_pred             cCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHH--------HHH
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA--------WKL  609 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~--------~~~  609 (706)
                      ...     ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+...        ...
T Consensus       158 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (328)
T cd07856         158 QDP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT  232 (328)
T ss_pred             cCC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            422     1122457889999999866 57899999999999999999999997543321111111100        000


Q ss_pred             hhcCCCcccccccc-cCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          610 WNEGMPSQLIDACF-KDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       610 ~~~~~~~~~~d~~~-~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .......+++.... .......     ....+.+++.+||+.+|++||++++++..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00000000000000 0000111     12356788999999999999999998765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.3e-32  Score=289.22  Aligned_cols=264  Identities=23%  Similarity=0.317  Sum_probs=192.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE------  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  456 (706)
                      .++|++.++||+|+||.||+|+.. +++.+|||++....  ......+.+|++++++++||||+++++++.+..      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            478999999999999999999975 57899999885432  222346778999999999999999999876543      


Q ss_pred             --eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          457 --EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       457 --~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                        ..++||||+.+ +|...+...  ...+++..+..++.|+++||.|||+.+   ++|+||||+||++++++.+||+|||
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENP--SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence              46999999975 566666432  235899999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCCCcc---------cccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHH
Q 005236          535 LARAFGGDETEG---------NTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIR  604 (706)
Q Consensus       535 la~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~  604 (706)
                      +++.........         ......+++.|+|||.+.+. .++.++||||||+++|||++|++||.........   .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~---~  237 (311)
T cd07866         161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL---H  237 (311)
T ss_pred             cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH---H
Confidence            998654322111         11234578889999988654 5889999999999999999999997543322211   1


Q ss_pred             HHHHHhhcCCC---------cccccccc--cCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          605 HAWKLWNEGMP---------SQLIDACF--KDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       605 ~~~~~~~~~~~---------~~~~d~~~--~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ...........         ....+...  .......     ....+.+++.+||+.+|.+|||+.|++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         238 LIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            11111110000         00000000  0000010     1135678999999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.4e-33  Score=296.02  Aligned_cols=262  Identities=24%  Similarity=0.321  Sum_probs=193.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE------  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  456 (706)
                      .++|.+.+.||+|+||.||+|+.. .++.||||++...  .......+.+|+.++++++||||+++++++....      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            478999999999999999999974 5889999998642  2233456889999999999999999999987543      


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      ..++|+||+.. +|..++     ...+++..+..++.|+++||+|||+.+   ++||||||+||+++.++.+||+|||++
T Consensus        94 ~~~lv~e~~~~-~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~  164 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA  164 (342)
T ss_pred             eEEEEeccccc-CHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence            46899999964 666654     134788999999999999999999987   999999999999999999999999998


Q ss_pred             cccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC--
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG--  613 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--  613 (706)
                      +....     ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.....   ..............  
T Consensus       165 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~---~~~~~~~~~~~~~~~~  236 (342)
T cd07879         165 RHADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY---LDQLTQILKVTGVPGP  236 (342)
T ss_pred             cCCCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhcCCCCH
Confidence            76422     1123467889999999876 4689999999999999999999999864221   11111111110000  


Q ss_pred             ---------CCcccccccc-cCcCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHHH--hcCCC
Q 005236          614 ---------MPSQLIDACF-KDSFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVILM--LGSEI  664 (706)
Q Consensus       614 ---------~~~~~~d~~~-~~~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~--L~~~~  664 (706)
                               .......... ....+.     .....+.+++..||+.+|.+||+++|++..  ++...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence                     0000000000 000000     011246689999999999999999999854  55543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.4e-33  Score=294.96  Aligned_cols=261  Identities=23%  Similarity=0.313  Sum_probs=194.5

Q ss_pred             HHHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC--
Q 005236          382 IANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE--  456 (706)
Q Consensus       382 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--  456 (706)
                      +....++|++.+.||+|+||.||++... ++..||||++...  .....+.+.+|+.++++++||||+++++++....  
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   89 (343)
T cd07880          10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL   89 (343)
T ss_pred             hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence            3445688999999999999999999874 5889999998542  2334567889999999999999999999987654  


Q ss_pred             ----eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          457 ----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       457 ----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                          ..++||||+ +++|.+++..    ..+++..+..++.||++||+|||+.+   |+||||||+||++++++.+||+|
T Consensus        90 ~~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~d  161 (343)
T cd07880          90 DRFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILD  161 (343)
T ss_pred             cccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEee
Confidence                358999999 7799888743    34889999999999999999999987   99999999999999999999999


Q ss_pred             eccccccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHH--
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL--  609 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~--  609 (706)
                      ||++......     .....+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||......   .........  
T Consensus       162 fg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~---~~~~~~~~~~~  233 (343)
T cd07880         162 FGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL---DQLMEIMKVTG  233 (343)
T ss_pred             cccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcC
Confidence            9999865321     122457889999999876 46889999999999999999999997543211   111110000  


Q ss_pred             ---------hhcCCCcccccccccC-cCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          610 ---------WNEGMPSQLIDACFKD-SFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       610 ---------~~~~~~~~~~d~~~~~-~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                               +............... ....     .....+.+++.+|++.+|.+|||+.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                     0000000000000000 0000     01124668999999999999999999983

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1.8e-32  Score=291.90  Aligned_cols=265  Identities=23%  Similarity=0.308  Sum_probs=191.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC---------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG---------  455 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---------  455 (706)
                      ..+|.+.+.||.|+||.||+|... .++.||+|++........+.+.+|+.++++++||||+++++++...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            368999999999999999999985 4889999998665556667889999999999999999999776543         


Q ss_pred             -----CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-CCCCeE
Q 005236          456 -----EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPK  529 (706)
Q Consensus       456 -----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~k  529 (706)
                           ...++||||++ ++|.+++..    ..+++..+..++.||+.||.|||+.+   ++||||||+||+++ +++.+|
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEE
Confidence                 35789999997 588887743    24788999999999999999999987   99999999999997 456789


Q ss_pred             EeeeccccccCCCCCc-ccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH
Q 005236          530 ISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       530 l~Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~  607 (706)
                      |+|||+++.+...... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||................
T Consensus       156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~  235 (342)
T cd07854         156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESV  235 (342)
T ss_pred             ECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            9999999865322111 11122457889999998754 568889999999999999999999985432211111000000


Q ss_pred             H--------HhhcCCCcccccccccCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          608 K--------LWNEGMPSQLIDACFKDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       608 ~--------~~~~~~~~~~~d~~~~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .        ......................     ....+.+++.+||+.+|.+|||++|++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         236 PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            0        0000000000000000000000     1134668999999999999999999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=6e-32  Score=279.36  Aligned_cols=242  Identities=27%  Similarity=0.319  Sum_probs=184.3

Q ss_pred             eeccCCceeEEEEEeC-CCcEEEEEEcCccch---hhHHHHHHHHH---HHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          394 KLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE---QGLKELKNEII---LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       394 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      .||+|+||.||++... .++.||+|.+.....   .....+..|..   .++...||||+++++++...+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999874 478999998865321   11222334433   3444579999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|..++...   ..+++..+..++.|+++||.|||+.+   ++||||||+||++++++.+||+|||++..+...    
T Consensus        81 g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----  150 (278)
T cd05606          81 GGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK----  150 (278)
T ss_pred             CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCcc----
Confidence            99999988543   45899999999999999999999987   999999999999999999999999998765322    


Q ss_pred             cccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......|+..|+|||.+.+. .++.++||||+|+++|||++|+.||........... ..   ..... ...+     ..
T Consensus       151 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~-~~---~~~~~-~~~~-----~~  220 (278)
T cd05606         151 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DR---MTLTM-AVEL-----PD  220 (278)
T ss_pred             CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH-HH---Hhhcc-CCCC-----CC
Confidence            12234689999999999754 689999999999999999999999865432221111 11   11100 0111     01


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVILM  659 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~~  659 (706)
                      ..    ...+.+++.+||+.+|.+||     ++.++++.
T Consensus       221 ~~----s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         221 SF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             cC----CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence            11    13466788899999999999     89999853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=7.5e-32  Score=283.59  Aligned_cols=244  Identities=28%  Similarity=0.454  Sum_probs=190.4

Q ss_pred             CCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          389 FSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      |...++||+|+||.||+|+.. .++.|++|++...   .....+.+.+|+.++++++|||++++++++.+.+..++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            666688999999999999974 5788999998642   233446788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +. ++|.+++...  ...+++..+..++.||+.+|.|||+.+   ++|+||+|+||++++++.+||+|||++....    
T Consensus       103 ~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~----  172 (313)
T cd06633         103 CL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSS----  172 (313)
T ss_pred             CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccC----
Confidence            96 5777776433  245889999999999999999999988   9999999999999999999999999986432    


Q ss_pred             cccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                        ......|+..|+|||++.   ...++.++||||||+++|||++|..|+.....   ......   ..... .......
T Consensus       173 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~---~~~~~~---~~~~~-~~~~~~~  243 (313)
T cd06633         173 --PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSALYH---IAQND-SPTLQSN  243 (313)
T ss_pred             --CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHH---HHhcC-CCCCCcc
Confidence              122356888999999984   45688999999999999999999999643221   111111   11111 1111111


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          ..    ...+.+++.+||+.+|.+||++.+++..
T Consensus       244 ----~~----~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         244 ----EW----TDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             ----cc----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                11    1235678899999999999999999854

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-34  Score=321.84  Aligned_cols=253  Identities=26%  Similarity=0.366  Sum_probs=196.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      +-++.....||.|.||.||.+... +|.-.|+|.+..  ........+.+|..++..++|||+|+++|+-.+++..+|.|
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence            345666789999999999999875 477789998754  23444567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      |||++|+|.+.+....   ..++.....+-.|++.|+.|||+++   ||||||||.||+|+.+|.+|++|||.|..+...
T Consensus      1314 EyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            9999999999985432   2445555567789999999999999   999999999999999999999999999988654


Q ss_pred             C--CcccccccccccCccCccccccC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          543 E--TEGNTNRVVGTYGYMAPEYASDG---QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       543 ~--~~~~~~~~~gt~~y~aPE~~~~~---~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      .  .........||+.|||||++.+.   .-..++||||+|||+.||+||++||...+.+   ..|-+   +...+..++
T Consensus      1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---~aIMy---~V~~gh~Pq 1461 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---WAIMY---HVAAGHKPQ 1461 (1509)
T ss_pred             hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---hHHHh---HHhccCCCC
Confidence            2  12233457899999999999764   3557899999999999999999998654431   11111   111222222


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      +... +        ..+-.+++..||+.||.+|-++.|+++.
T Consensus      1462 ~P~~-l--------s~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1462 IPER-L--------SSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             Cchh-h--------hHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            2211 1        1123468889999999999888776654

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=1.2e-32  Score=292.09  Aligned_cols=261  Identities=25%  Similarity=0.324  Sum_probs=189.3

Q ss_pred             CCCccceeccCCceeEEEEEeCC---CcEEEEEEcCcc--chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeC----Ce
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD---EQEIAVKRLSKI--SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHG----EE  457 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~  457 (706)
                      +|++.+.||+|+||.||+++...   ++.||+|++...  .....+.+.+|+.+++++ +||||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            47888999999999999999753   678999998642  222356778899999999 599999999876533    35


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++++||+. ++|.+++...   ..+++..+..++.||+.||+|||+.+   ++||||||+|||+++++.+||+|||+++
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            688889886 6898888543   35889999999999999999999988   9999999999999999999999999998


Q ss_pred             ccCCCCCc--ccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh---
Q 005236          538 AFGGDETE--GNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN---  611 (706)
Q Consensus       538 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~---  611 (706)
                      .+......  .......|+..|+|||++.+ ..++.++||||+|+++|+|++|+.||.......   ..........   
T Consensus       154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~  230 (332)
T cd07857         154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD---QLNQILQVLGTPD  230 (332)
T ss_pred             ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH---HHHHHHHHhCCCC
Confidence            76432211  11233568999999998765 468999999999999999999999875432211   1111110000   


Q ss_pred             --------cCCCcccccccc-cCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          612 --------EGMPSQLIDACF-KDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       612 --------~~~~~~~~d~~~-~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                              ............ .......     ....+.+++.+||+.+|.+|||+.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         231 EETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                    000000000000 0000000     1235668999999999999999999863

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=3.7e-32  Score=285.30  Aligned_cols=250  Identities=28%  Similarity=0.405  Sum_probs=193.7

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc---cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      +.|...+.||+|+||.||+|+.. +++.+++|.+..   ......+.+.+|+.+++.++|+|++++++++......++||
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            34677789999999999999985 577899998753   23334567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+. |+|.+++....  ..+++..+..++.|++.||.|||+.+   ++||||+|+||+++.++.+||+|||++......
T Consensus        95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  168 (308)
T cd06634          95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  168 (308)
T ss_pred             EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence            9997 57877764332  34788999999999999999999987   999999999999999999999999998765321


Q ss_pred             CCcccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                            ....++..|+|||.+.   ...++.++||||||+++|||++|+.|+.......   ...   .. .........
T Consensus       169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~---~~-~~~~~~~~~  235 (308)
T cd06634         169 ------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---ALY---HI-AQNESPALQ  235 (308)
T ss_pred             ------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH---HHH---HH-hhcCCCCcC
Confidence                  2345788999999974   3567889999999999999999999964322111   111   11 111111110


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .    .    .....+.+++.+||+.+|.+||++++|+...--.
T Consensus       236 ~----~----~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~  271 (308)
T cd06634         236 S----G----HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL  271 (308)
T ss_pred             c----c----cccHHHHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence            0    0    1112356788999999999999999999775433

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-33  Score=272.07  Aligned_cols=242  Identities=22%  Similarity=0.285  Sum_probs=194.7

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ..++|..+++||+|.||.|.+++-+ .++.+|+|++++.   .......-..|-++++..+||.+..|--.|...+.+++
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF  245 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF  245 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence            3478999999999999999999875 4888999999773   34445566779999999999999999888999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||..||.|.-+|.+.   ..+++.....+-.+|+.||.|||+.+   ||.||||.+|.|+|.+|++||+|||+++.--
T Consensus       246 VMeyanGGeLf~HLsre---r~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I  319 (516)
T KOG0690|consen  246 VMEYANGGELFFHLSRE---RVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEI  319 (516)
T ss_pred             EEEEccCceEeeehhhh---hcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcc
Confidence            99999999999888543   34777777888899999999999988   9999999999999999999999999998632


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                        .....+...+|||.|+|||++....|....|.|.+||++|||++|+.||...+.+...+++.-.     +-..+.-+.
T Consensus       320 --~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e-----d~kFPr~ls  392 (516)
T KOG0690|consen  320 --KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME-----DLKFPRTLS  392 (516)
T ss_pred             --cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh-----hccCCccCC
Confidence              2223455689999999999999999999999999999999999999998544433333332211     111111111


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP  651 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  651 (706)
                                  .++..|..-.|..||.+|.
T Consensus       393 ------------~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  393 ------------PEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             ------------HHHHHHHHHHhhcChHhhc
Confidence                        1234566678999999996

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-32  Score=283.79  Aligned_cols=258  Identities=26%  Similarity=0.342  Sum_probs=196.5

Q ss_pred             CCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          389 FSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      |++.+.||+|++|.||+|+... ++.+++|.+....  ....+.+..|+.++++++|+||+++++++.+.+..++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            5667899999999999999864 8899999987642  334567888999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      + ++|.+++....  ..+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.+||+|||+++....... 
T Consensus        81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-  153 (282)
T cd07829          81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-  153 (282)
T ss_pred             C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence            8 58999996542  35889999999999999999999988   99999999999999999999999999987543221 


Q ss_pred             ccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC-----------
Q 005236          546 GNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG-----------  613 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~-----------  613 (706)
                       ......++..|+|||.+.+. .++.++||||||+++|||++|+.|+......   .............           
T Consensus       154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  229 (282)
T cd07829         154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI---DQLFKIFQILGTPTEESWPGVTKL  229 (282)
T ss_pred             -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH---HHHHHHHHHhCCCcHHHHHhhccc
Confidence             12223457789999998776 8899999999999999999999887543221   1111111111000           


Q ss_pred             -----CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          614 -----MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       614 -----~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                           ..+........... ......+.+++..||+.+|++||++++|+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         230 PDYKPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             ccccccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                 00000000000000 001235778999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=6e-33  Score=267.23  Aligned_cols=281  Identities=23%  Similarity=0.280  Sum_probs=202.8

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-----CcEEEEEEcCccch--hhHHHHHHHHHHHhhcCCcceeeeEeEEEe-CCee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-----EQEIAVKRLSKISE--QGLKELKNEIILFSKLQHRNLVKLLGCCIH-GEEK  458 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~  458 (706)
                      ..|+...+||+|.||.||+|.-.+     .+.+|+|+++....  ......-+|+.+++.++||||+.|..++.+ +...
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            578899999999999999996432     34789999865422  123456789999999999999999999988 6788


Q ss_pred             EEEEecCCCCChhhhhhcc--cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC----CCeEEee
Q 005236          459 LLIYEFMPNKSLDSFIFDQ--ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD----MNPKISD  532 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~----~~~kl~D  532 (706)
                      ++++||.+. +|.+.|+.+  ...+.++...+..|+.||+.|+.|||+.-   |+||||||.||||..+    |.+||+|
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaD  179 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIAD  179 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeec
Confidence            999999976 788888643  33457888899999999999999999875   9999999999999887    8999999


Q ss_pred             eccccccCCCCC-cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc------hhHHH
Q 005236          533 FGLARAFGGDET-EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK------LNLIR  604 (706)
Q Consensus       533 fgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~------~~~~~  604 (706)
                      ||+++.+...-. ......++-|.-|.|||.+.+. .||.+.||||.|||+.||+|-++.|.....+..      .+...
T Consensus       180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~  259 (438)
T KOG0666|consen  180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD  259 (438)
T ss_pred             ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence            999998854322 2244567889999999999874 799999999999999999999888754322111      11222


Q ss_pred             HHHHHhhc---CCCccc----------ccccccCcCC--HHHH--------HHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          605 HAWKLWNE---GMPSQL----------IDACFKDSFN--LAEV--------IRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       605 ~~~~~~~~---~~~~~~----------~d~~~~~~~~--~~~~--------~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ...+++.-   ..++.+          .+.......+  +...        ....+|...+|+.||.+|.|+++.++..-
T Consensus       260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y  339 (438)
T KOG0666|consen  260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY  339 (438)
T ss_pred             HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence            22222211   111110          0100000011  1110        02568889999999999999999876543


Q ss_pred             CCCCCCCCCCC
Q 005236          662 SEIVLPQPKQP  672 (706)
Q Consensus       662 ~~~~~~~p~~p  672 (706)
                      - ...+.||.|
T Consensus       340 F-~~d~lpp~p  349 (438)
T KOG0666|consen  340 F-TEDPLPPLP  349 (438)
T ss_pred             c-ccCCCCCCc
Confidence            2 233344444

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=3.9e-32  Score=277.84  Aligned_cols=250  Identities=26%  Similarity=0.365  Sum_probs=192.0

Q ss_pred             CCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc-----chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI-----SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      +|.+.++||+|+||.||++.... +..+++|.++..     .......+..|+.++++++||||+++++++.+....++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            47888999999999999998754 344555554331     222344567899999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          462 YEFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |||+++++|.+++... .....+++..++.++.|++.||.|||+.+   ++|+||+|+||++++ +.+||+|||+++...
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence            9999999999988642 23356899999999999999999999987   999999999999975 569999999998753


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ....  ......+++.|+|||.+.+..++.++|+||||+++|+|++|..|+....   .....   .... ......+  
T Consensus       157 ~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~---~~~~~---~~~~-~~~~~~~--  225 (260)
T cd08222         157 GSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN---FLSVV---LRIV-EGPTPSL--  225 (260)
T ss_pred             CCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHH---HHHH-cCCCCCC--
Confidence            3221  2223457889999999988889999999999999999999999974321   11111   1111 1111111  


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                             .......+.+++.+||+.+|++||++.|+++.
T Consensus       226 -------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         226 -------PETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             -------cchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence                   11112356678999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.3e-33  Score=295.60  Aligned_cols=258  Identities=24%  Similarity=0.350  Sum_probs=195.3

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe----
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE----  457 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----  457 (706)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++...  .....+.+.+|+.++++++||||+++++++...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            4578999999999999999999985 4788999998642  23344667889999999999999999988876554    


Q ss_pred             --eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          458 --KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       458 --~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                        .++|+||+ +++|.+++..    ..+++..+..++.|+++||+|||+.+   |+|+||+|+||++++++.+||+|||+
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~  164 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGL  164 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEccccc
Confidence              89999998 5699988854    35899999999999999999999987   99999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      +......     .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.....   ............ ..
T Consensus       165 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~---~~~~~~i~~~~~-~~  235 (343)
T cd07851         165 ARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH---IDQLKRIMNLVG-TP  235 (343)
T ss_pred             ccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcC-CC
Confidence            9865322     223467889999999865 3678999999999999999999999753322   111111111110 00


Q ss_pred             Cccc------------cccccc-CcCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          615 PSQL------------IDACFK-DSFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       615 ~~~~------------~d~~~~-~~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ...+            +..... ...+.     .....+.+++.+||+.+|.+|||+.||++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         236 DEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             CHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            0000            000000 00000     012467789999999999999999999763

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.98  E-value=1.5e-32  Score=259.99  Aligned_cols=252  Identities=23%  Similarity=0.377  Sum_probs=191.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCc-cchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSK-ISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++.+.+..||.|..|+|++.+... |..+|||...+ .+....+++...+.++.+-+ +|+||+.+|+|.......+.||
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            345566789999999999999865 78899999876 45566778888888887765 9999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      .|.- .++.++.+-  .+++++..+=++...+++||.||.+++  .|+|||+||+|||+|+.|++||+|||++-++-...
T Consensus       172 lMs~-C~ekLlkri--k~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk  246 (391)
T KOG0983|consen  172 LMST-CAEKLLKRI--KGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK  246 (391)
T ss_pred             HHHH-HHHHHHHHh--cCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc
Confidence            9843 344444332  244777777788899999999999876  59999999999999999999999999997764322


Q ss_pred             CcccccccccccCccCccccccC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDG---QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~---~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                         ......|-+.|||||.+.-.   .|+.++||||||+.|+||.||+.||.....  ..+......   ++ .++ .++
T Consensus       247 ---AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t--dFe~ltkvl---n~-ePP-~L~  316 (391)
T KOG0983|consen  247 ---AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT--DFEVLTKVL---NE-EPP-LLP  316 (391)
T ss_pred             ---ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc--cHHHHHHHH---hc-CCC-CCC
Confidence               22346788999999999643   788999999999999999999999764322  122222222   11 111 111


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      +...  +..    .+.+++..||+.|+.+||...++++.
T Consensus       317 ~~~g--FSp----~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  317 GHMG--FSP----DFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             cccC--cCH----HHHHHHHHHhhcCcccCcchHHHhcC
Confidence            1111  221    35578889999999999999998864

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.98  E-value=1.3e-31  Score=307.58  Aligned_cols=146  Identities=27%  Similarity=0.420  Sum_probs=131.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|.+.++||+|+||.||+|.+. .++.||||++...   .......+..|+.++..++||||++++..+......++|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            368999999999999999999986 5889999998643   234456788999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      |||+++++|.+++...   ..+++..++.++.||+.||.|||..+   |+||||||+||||+.++.+||+|||+++
T Consensus        83 mEy~~g~~L~~li~~~---~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          83 MEYLIGGDVKSLLHIY---GYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            9999999999999543   34788889999999999999999987   9999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.98  E-value=8.3e-34  Score=267.75  Aligned_cols=256  Identities=27%  Similarity=0.341  Sum_probs=193.6

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +.+-+..||.|+||+|+|-..+ .|+.+|||+++.. .....+++..|.+...+- +.||||+++|++..+...++.||.
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL  144 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL  144 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence            3444578999999999999874 5899999999764 346778899999876554 799999999999999999999999


Q ss_pred             CCCCChhhhhhc--ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          465 MPNKSLDSFIFD--QERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       465 ~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      |. .+|+.+...  ..+...+++..+-+|..-.++||.||.+.-  .|||||+||+||||+..|.+||+|||++-.+..+
T Consensus       145 Md-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S  221 (361)
T KOG1006|consen  145 MD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS  221 (361)
T ss_pred             Hh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH
Confidence            94 455544321  122345777777788888999999998753  6999999999999999999999999998765322


Q ss_pred             CCcccccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      -   ....-.|-..|||||.+..  ..|+.+|||||||++|||+.||+.|+..+..     ..+...+. ..+.++.+..
T Consensus       222 i---AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~V-v~gdpp~l~~  292 (361)
T KOG1006|consen  222 I---AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQV-VIGDPPILLF  292 (361)
T ss_pred             H---HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHHH-HcCCCCeecC
Confidence            1   2223467788999999964  3589999999999999999999999765443     12222222 2333333322


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      +    ....+-...++.++-.||..|-.+||...++.++
T Consensus       293 ~----~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  293 D----KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             c----ccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            1    1112233467789999999999999999998765

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=7.2e-33  Score=275.37  Aligned_cols=241  Identities=24%  Similarity=0.324  Sum_probs=191.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  460 (706)
                      ..+|.++.+||+|+||.|.++..+. .+.+|||++++.   ...+.+.-+.|-++|+.. +-|.++.+..+|..-+.+|+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            4578899999999999999998765 567899999763   334455667788888777 46789999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+.||+|--+|.+-.+   +.+..+..+|.+||.||-+||+++   ||.||||..||||+.+|++||+|||+++.--
T Consensus       428 VMEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni  501 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI  501 (683)
T ss_pred             EEEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccccc
Confidence            9999999999888865443   566778889999999999999998   9999999999999999999999999998521


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                        .....+...+||+.|+|||++...+|...+|.|||||+||||+.|++||+..+.++....+   ...    ..     
T Consensus       502 --~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI---~eh----nv-----  567 (683)
T KOG0696|consen  502 --FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAI---MEH----NV-----  567 (683)
T ss_pred             --cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH---HHc----cC-----
Confidence              1223455689999999999999999999999999999999999999998764443322222   111    10     


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP  651 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  651 (706)
                           .++-.-..+++.+....|..+|.+|.
T Consensus       568 -----syPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  568 -----SYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             -----cCcccccHHHHHHHHHHhhcCCcccc
Confidence                 11111122445667778889999984

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.98  E-value=6.7e-33  Score=282.98  Aligned_cols=242  Identities=26%  Similarity=0.365  Sum_probs=193.2

Q ss_pred             ceeccCCceeEEEEEe-CCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCC
Q 005236          393 KKLGEGGFGPVYKGTL-ADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKS  469 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs  469 (706)
                      ++||.|.||+||-|+. +.|+.||||++.+  ...+...++++|+.+|++++||.||.|...|+..+..++|||-+.|.-
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDM  649 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDM  649 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchH
Confidence            7899999999999997 5699999999866  344455789999999999999999999999999999999999997665


Q ss_pred             hhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC---CCeEEeeeccccccCCCCCcc
Q 005236          470 LDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       470 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~---~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      |.-.|. .+ ...+++..-..++.||+.||.|||.++   |+|+||||+|||+.+.   -.+||+|||.|++++....  
T Consensus       650 LEMILS-sE-kgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF--  722 (888)
T KOG4236|consen  650 LEMILS-SE-KGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF--  722 (888)
T ss_pred             HHHHHH-hh-cccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhhh--
Confidence            655553 33 245777777788999999999999998   9999999999999754   4699999999999865433  


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                       ....+||+.|+|||+++++.|...-|+||+|||+|--++|..||..  .++..+.+..+.-++....+.++-.      
T Consensus       723 -RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNAaFMyPp~PW~eis~------  793 (888)
T KOG4236|consen  723 -RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNAAFMYPPNPWSEISP------  793 (888)
T ss_pred             -hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhccccccCCCchhhcCH------
Confidence             2347899999999999999999999999999999999999999742  2233344444433333333333322      


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                             .+++++-..||..-++|-+..+-+
T Consensus       794 -------~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  794 -------EAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             -------HHHHHHHHHHHHHHHHhcchHhhc
Confidence                   345677788888888887776543

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.98  E-value=4.6e-32  Score=293.71  Aligned_cols=261  Identities=28%  Similarity=0.438  Sum_probs=211.6

Q ss_pred             cHHHHHHhccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEe-
Q 005236          378 ELATIANATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIH-  454 (706)
Q Consensus       378 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-  454 (706)
                      .+..+...++-|++.+.||+|.+|.||+++. ++++.+|+|++.. .....++++.|.++++.+ .|||++.+++++.. 
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~-~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDP-TEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecC-CccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            4455566678899999999999999999997 5588889988754 334457889999999888 69999999999974 


Q ss_pred             ----CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          455 ----GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       455 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                          ++.++||||||.+|+..+++.... ...+.|..+..|++.++.||.+||...   ++|||||-.|||++.++.+||
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKL  164 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKL  164 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEE
Confidence                568899999999999999997655 567899999999999999999999877   999999999999999999999


Q ss_pred             eeeccccccCCCCCcccccccccccCccCccccccC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHH
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-----QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH  605 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~  605 (706)
                      +|||++..+  +.+....+...||+.|||||++...     .|+.++|+||||++..||--|.+|+...++...+.++  
T Consensus       165 vDFGvSaQl--dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I--  240 (953)
T KOG0587|consen  165 VDFGVSAQL--DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI--  240 (953)
T ss_pred             eeeeeeeee--ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC--
Confidence            999999876  3344556668999999999999653     5778999999999999999999998766654332221  


Q ss_pred             HHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       606 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                           ....++.+..       ...-..++.+++..||..|-++||++.++++.
T Consensus       241 -----pRNPPPkLkr-------p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  241 -----PRNPPPKLKR-------PKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             -----CCCCCccccc-------hhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence                 1111122211       12234466789999999999999999998753

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.98  E-value=4.5e-32  Score=286.56  Aligned_cols=241  Identities=23%  Similarity=0.270  Sum_probs=192.9

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .+++|.+...+|.|+|+.|-.+.. ..++..+||++.+..    ....+|+.++... +||||+++.+.+.++.+.++||
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~  395 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM  395 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence            467899999999999999999887 457889999997652    2234566555544 7999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE-cCCCCeEEeeeccccccCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL-DQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill-~~~~~~kl~Dfgla~~~~~  541 (706)
                      |.+.++-|.+.+.....    ....+..|+.+|+.++.|||+++   +|||||||+|||+ ++.++++|+|||.++....
T Consensus       396 e~l~g~ell~ri~~~~~----~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~  468 (612)
T KOG0603|consen  396 ELLDGGELLRRIRSKPE----FCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELER  468 (612)
T ss_pred             hhccccHHHHHHHhcch----hHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence            99999988887754432    22677789999999999999998   9999999999999 6999999999999987654


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      +     ....+-|..|.|||++....+++++|+||||++||+||+|+.|+...+.+      ......+..+...+.   
T Consensus       469 ~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i~~~~~s~~---  534 (612)
T KOG0603|consen  469 S-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRIQMPKFSEC---  534 (612)
T ss_pred             h-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhhcCCccccc---
Confidence            3     23356688999999999999999999999999999999999998754443      112222222222211   


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                               -...+.+|+.+||+.||.+||+|.++...
T Consensus       535 ---------vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  535 ---------VSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             ---------cCHHHHHHHHHhccCChhhCcChhhhccC
Confidence                     12245678999999999999999998653

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-31  Score=272.57  Aligned_cols=236  Identities=27%  Similarity=0.330  Sum_probs=189.7

Q ss_pred             eccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          395 LGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       395 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      ||+|+||.||++... +++.+++|.+....   ......+..|+.++++++||||+++++.+..+...++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999985 48899999886532   23456889999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccc
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR  550 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~  550 (706)
                      .+++....   .+++..+..++.|++.||.|||+.+   ++|+||+|+||+++.++.++|+|||++.......  .....
T Consensus        81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~  152 (250)
T cd05123          81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNT  152 (250)
T ss_pred             HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccC
Confidence            99996442   4789999999999999999999987   9999999999999999999999999998754322  12233


Q ss_pred             cccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHH
Q 005236          551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLA  630 (706)
Q Consensus       551 ~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  630 (706)
                      ..++..|+|||.+.+...+.++|+||||+++|||++|+.||.....   .........  .........           
T Consensus       153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~--~~~~~~~~~-----------  216 (250)
T cd05123         153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKILK--DPLRFPEFL-----------  216 (250)
T ss_pred             CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhc--CCCCCCCCC-----------
Confidence            5678899999999988899999999999999999999999753322   111111111  000111111           


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCChhH
Q 005236          631 EVIRCIHIGLLCVQQYPEDRPCMPS  655 (706)
Q Consensus       631 ~~~~~~~l~~~cl~~~p~~RPt~~e  655 (706)
                       ...+.+++.+||..+|++||++.+
T Consensus       217 -~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         217 -SPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             -CHHHHHHHHHHhcCCHhhCCCccc
Confidence             234567899999999999999955

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-32  Score=302.66  Aligned_cols=208  Identities=24%  Similarity=0.339  Sum_probs=181.9

Q ss_pred             cHHHHHHhccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCc---cchhhHHHHHHHHHHHhhcCCcceeeeEeEEE
Q 005236          378 ELATIANATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLGCCI  453 (706)
Q Consensus       378 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  453 (706)
                      ...++....++|.++++||+|+||.|..++.+. ++.||+|++++   ........|..|-.+|..-+.+=|+.|+-+|.
T Consensus        66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ  145 (1317)
T KOG0612|consen   66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ  145 (1317)
T ss_pred             HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence            345556667899999999999999999999865 77889999987   33455678999999999999999999999999


Q ss_pred             eCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeee
Q 005236          454 HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDF  533 (706)
Q Consensus       454 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df  533 (706)
                      +..++|+|||||+||+|-.+|....   .+++..+..++..|+.||.-||+.|   +|||||||.|||||..|++||+||
T Consensus       146 D~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADF  219 (1317)
T KOG0612|consen  146 DERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADF  219 (1317)
T ss_pred             CccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccc
Confidence            9999999999999999999995443   5888888899999999999999888   999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccccCccCcccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCC
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASD-----GQFSVKSDVFSFGILLLEIVSGKKNRG  592 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDv~SlGvil~elltG~~p~~  592 (706)
                      |.+-.+..+. .......+|||.|++||++..     +.|...+|.||+||++|||+.|..||-
T Consensus       220 GsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY  282 (1317)
T KOG0612|consen  220 GSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY  282 (1317)
T ss_pred             hhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence            9998765333 334456799999999999953     578899999999999999999999974

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=5.3e-32  Score=259.63  Aligned_cols=253  Identities=22%  Similarity=0.268  Sum_probs=193.2

Q ss_pred             hccCCCcc-ceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEe----CCe
Q 005236          385 ATDNFSIN-KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIH----GEE  457 (706)
Q Consensus       385 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~  457 (706)
                      .+++|++. ++||-|--|.|.....+ .++.+|+|++...     ...++|+++--.. .|||||.+++++..    ...
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            45677765 68999999999998875 4778999988532     3457788875555 69999999999864    346


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC---CCCeEEeeec
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---DMNPKISDFG  534 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl~Dfg  534 (706)
                      +++|||.|+||.|...|.++.. ..+++.++-.|..||+.|+.|||+.+   |.||||||+|+|...   +-.+||+|||
T Consensus       134 LLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             eEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccc
Confidence            7899999999999999976543 55889999999999999999999988   999999999999964   4579999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      +|+....   .......+-|+.|.|||++....|+...|+||+||++|-|++|.+||-..+......-..   ..+..+.
T Consensus       210 FAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk---~rI~~gq  283 (400)
T KOG0604|consen  210 FAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK---RRIRTGQ  283 (400)
T ss_pred             cccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHH---hHhhccC
Confidence            9997432   233345678999999999999999999999999999999999999985444321111100   1111111


Q ss_pred             CcccccccccCcCCHHHH-HHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          615 PSQLIDACFKDSFNLAEV-IRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~-~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      . ++.+      ....++ +.+.+++...|..+|.+|.|+.+++..
T Consensus       284 y-~FP~------pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  284 Y-EFPE------PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             c-cCCC------hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            0 1111      112222 244578899999999999999999864

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-31  Score=256.58  Aligned_cols=254  Identities=23%  Similarity=0.279  Sum_probs=197.0

Q ss_pred             ceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          393 KKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      +.||+|+|+.|--+.. ..++++|||++.+.......++.+|++++...+ |+||+.|+.+|+++...|||||-|.||.|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            7899999999998864 679999999998887777889999999999986 99999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC---eEEeeeccccccCC--CC--
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGG--DE--  543 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~---~kl~Dfgla~~~~~--~~--  543 (706)
                      ..+|.++   +.+++.++.++...|+.||.+||.++   |.||||||+|||-....+   +||+||.+..-+..  +-  
T Consensus       164 LshI~~~---~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp  237 (463)
T KOG0607|consen  164 LSHIQKR---KHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP  237 (463)
T ss_pred             HHHHHHh---hhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence            9999654   44888999999999999999999998   999999999999976654   79999998765422  11  


Q ss_pred             -CcccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc----hh----HHHHHHHH
Q 005236          544 -TEGNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK----LN----LIRHAWKL  609 (706)
Q Consensus       544 -~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~----~~----~~~~~~~~  609 (706)
                       +.......+|+..|||||+..     ...|+.+.|.||||||||-||+|.+||...-..+-    .+    -.......
T Consensus       238 astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFes  317 (463)
T KOG0607|consen  238 ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFES  317 (463)
T ss_pred             CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHH
Confidence             112233468899999999873     24688999999999999999999999975433211    11    11112222


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +.++.. ++.|..+..     -..+..+++...+-.++.+|-++.+++.
T Consensus       318 IQEGkY-eFPdkdWah-----IS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  318 IQEGKY-EFPDKDWAH-----ISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HhccCC-cCChhhhHH-----hhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            233322 222322211     1124456788888899999999988876

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=5.3e-31  Score=265.57  Aligned_cols=221  Identities=20%  Similarity=0.150  Sum_probs=173.7

Q ss_pred             CCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCChhhhhhc
Q 005236          398 GGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD  476 (706)
Q Consensus       398 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~  476 (706)
                      |.+|.||++++. +++.+|+|++....     .+..|...+....||||+++++++.+.+..++||||+++++|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            899999999984 57899999986543     233455555666799999999999999999999999999999999865


Q ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccC
Q 005236          477 QERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG  556 (706)
Q Consensus       477 ~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~  556 (706)
                      ..   .+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.++++|||.+......     .....++..
T Consensus        79 ~~---~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~  147 (237)
T cd05576          79 FL---NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENM  147 (237)
T ss_pred             hc---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCcc
Confidence            42   4889999999999999999999987   999999999999999999999999988765321     112345678


Q ss_pred             ccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHH
Q 005236          557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCI  636 (706)
Q Consensus       557 y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  636 (706)
                      |+|||.+....++.++||||+|+++|||++|+.|+.......            ......+     +....    ...+.
T Consensus       148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------------~~~~~~~-----~~~~~----~~~~~  206 (237)
T cd05576         148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------------NTHTTLN-----IPEWV----SEEAR  206 (237)
T ss_pred             ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------------ccccccC-----CcccC----CHHHH
Confidence            999999988889999999999999999999998754221100            0000000     01111    12456


Q ss_pred             HHHHHhcCCCCCCCCChhH
Q 005236          637 HIGLLCVQQYPEDRPCMPS  655 (706)
Q Consensus       637 ~l~~~cl~~~p~~RPt~~e  655 (706)
                      +++.+||+.||.+||++.+
T Consensus       207 ~li~~~l~~dp~~R~~~~~  225 (237)
T cd05576         207 SLLQQLLQFNPTERLGAGV  225 (237)
T ss_pred             HHHHHHccCCHHHhcCCCc
Confidence            7899999999999999743

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.7e-32  Score=275.59  Aligned_cols=269  Identities=22%  Similarity=0.276  Sum_probs=216.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcE-EEEEEcCc---cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ..+++++..||-|+||.|=++..+.... +|+|.+++   ......+.+..|-.+|...+.|.||++|..|.+....|++
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL  498 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML  498 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence            3566777889999999999998866443 78887765   3445567788999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      ||-|-||.|...|.+..   .++......++..+.+|++|||.++   ||.|||||+|++++.+|-+||.|||+|+.++.
T Consensus       499 mEaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~  572 (732)
T KOG0614|consen  499 MEACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS  572 (732)
T ss_pred             HHhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence            99999999999997654   3667777888999999999999988   99999999999999999999999999999854


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      .   ..+-..+||+.|.|||++.+...+.++|.||||+++|||++|.+||...++-...+++......+.-+  +.+   
T Consensus       573 g---~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P--r~I---  644 (732)
T KOG0614|consen  573 G---RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP--RRI---  644 (732)
T ss_pred             C---CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc--ccc---
Confidence            3   34556899999999999999999999999999999999999999998777766666665544433211  111   


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHHHh-------cCC--CCCCCCCCCCcccCC
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVILML-------GSE--IVLPQPKQPGYLADR  678 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~~L-------~~~--~~~~~p~~p~~~~~~  678 (706)
                                .....+++...+..+|.+|--     +.++-+.-       +++  ..+++|-.|.....-
T Consensus       645 ----------~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~pt  705 (732)
T KOG0614|consen  645 ----------TKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPT  705 (732)
T ss_pred             ----------chhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcc
Confidence                      124457788888899999986     55555432       222  456666667655443

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-31  Score=266.90  Aligned_cols=258  Identities=27%  Similarity=0.331  Sum_probs=193.6

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcC--ccch-----hhHHHHHHHHHHHhhcCCcceeeeEeEEEe-C
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLS--KISE-----QGLKELKNEIILFSKLQHRNLVKLLGCCIH-G  455 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~--~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~  455 (706)
                      ..++|-++.+||+|||+.|||+.+- ..+.||||+-.  +...     ...+...+|..+-+.|.||.||++|+++.- .
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            3467888899999999999999874 46678888742  2222     223456789999999999999999999965 4


Q ss_pred             CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC---CCCeEEee
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---DMNPKISD  532 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl~D  532 (706)
                      +..+-|+|||+|.+|+-||..+   +.+++.++..|+.||+.||.||.+.. ++|||-||||.||||-+   -|.+||.|
T Consensus       541 dsFCTVLEYceGNDLDFYLKQh---klmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITD  616 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDLDFYLKQH---KLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITD  616 (775)
T ss_pred             ccceeeeeecCCCchhHHHHhh---hhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeee
Confidence            5778999999999999999654   45899999999999999999999874 78999999999999954   47899999


Q ss_pred             eccccccCCCCCc-----ccccccccccCccCcccccc----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHH
Q 005236          533 FGLARAFGGDETE-----GNTNRVVGTYGYMAPEYASD----GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI  603 (706)
Q Consensus       533 fgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~----~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~  603 (706)
                      ||+++....+...     ..+....||..|++||.+.-    ..++.|+||||+|||+|..+.|++||.....   ...+
T Consensus       617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs---QQdI  693 (775)
T KOG1151|consen  617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS---QQDI  693 (775)
T ss_pred             cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh---HHHH
Confidence            9999988654333     23455789999999998853    3688999999999999999999999864221   1111


Q ss_pred             HHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          604 RHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       604 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                      .....++..... .+ .  .+...    .-++..++.+||++--++|....+++
T Consensus       694 LqeNTIlkAtEV-qF-P--~KPvV----sseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  694 LQENTILKATEV-QF-P--PKPVV----SSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             Hhhhchhcceec-cC-C--CCCcc----CHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            111111111100 00 0  00011    12345688999999999998777665

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.8e-31  Score=264.96  Aligned_cols=262  Identities=20%  Similarity=0.253  Sum_probs=201.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcC--Ccc----eeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQ--HRN----LVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~n----iv~l~~~~~~~~~~  458 (706)
                      .++|.+...+|+|.||.|-+..+.. +..||||+++.. ....+..+-|+++++++.  -|+    +|.+.++|...++.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            6899999999999999999998754 678999998543 344566778999999994  233    78888899999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC--------------
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ--------------  524 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~--------------  524 (706)
                      ++|+|.+ |-++.++|..+. ...++...+..++.|+++++++||+..   ++|-||||+|||+-+              
T Consensus       167 Civfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~  241 (415)
T KOG0671|consen  167 CIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVC  241 (415)
T ss_pred             EEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccc
Confidence            9999998 668999996543 456788999999999999999999987   999999999999831              


Q ss_pred             ------CCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 005236          525 ------DMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN  598 (706)
Q Consensus       525 ------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~  598 (706)
                            +..+||+|||.|..-....     ...+.|..|.|||++.+-.++.++||||+||||.|+.+|...|...+..+
T Consensus       242 ~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E  316 (415)
T KOG0671|consen  242 FIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE  316 (415)
T ss_pred             eeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence                  3458999999998743222     44788999999999999999999999999999999999999876555433


Q ss_pred             chhHHHHHHHHhhcCCC-------------------------ccccccccc----CcCCHHHHHHHHHHHHHhcCCCCCC
Q 005236          599 KLNLIRHAWKLWNEGMP-------------------------SQLIDACFK----DSFNLAEVIRCIHIGLLCVQQYPED  649 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~-------------------------~~~~d~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~  649 (706)
                      .+.+.+.....+...++                         ....+.+..    ...+-.+..++.+|+..||.+||.+
T Consensus       317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~  396 (415)
T KOG0671|consen  317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR  396 (415)
T ss_pred             HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence            33333322211110000                         000110000    1122346678899999999999999


Q ss_pred             CCChhHHHH
Q 005236          650 RPCMPSVIL  658 (706)
Q Consensus       650 RPt~~ev~~  658 (706)
                      |+|+.|++.
T Consensus       397 RiTl~EAL~  405 (415)
T KOG0671|consen  397 RITLREALS  405 (415)
T ss_pred             cccHHHHhc
Confidence            999999985

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=1.7e-30  Score=290.95  Aligned_cols=262  Identities=19%  Similarity=0.241  Sum_probs=167.1

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-----CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeE------EE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-----EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGC------CI  453 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~  453 (706)
                      ..++|++.++||+|+||.||+|++.+     +..||||++......  +....|  .+....+.+++.++..      ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            45789999999999999999999854     588999987643221  111111  1122222222222211      24


Q ss_pred             eCCeeEEEEecCCCCChhhhhhccccc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccC
Q 005236          454 HGEEKLLIYEFMPNKSLDSFIFDQERC-----------------KLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLK  516 (706)
Q Consensus       454 ~~~~~~lV~e~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik  516 (706)
                      .+...++||||+++++|.+++......                 .......+..++.||+.||+|||+.+   |+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence            566889999999999999998643210                 01122345678999999999999987   9999999


Q ss_pred             CCcEEEcC-CCCeEEeeeccccccCCCCCcccccccccccCccCccccccC----------------------CCCcchh
Q 005236          517 ASNVLLDQ-DMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG----------------------QFSVKSD  573 (706)
Q Consensus       517 p~Nill~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~~sD  573 (706)
                      |+|||+++ ++.+||+|||+|+.+..... .......+++.|||||.+...                      .++.++|
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D  361 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD  361 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence            99999986 58999999999986533221 122346789999999966322                      2345679


Q ss_pred             hHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH------HHhhcCCCcccccccccCcCCH--HHHHHHHHHHHHhcCC
Q 005236          574 VFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW------KLWNEGMPSQLIDACFKDSFNL--AEVIRCIHIGLLCVQQ  645 (706)
Q Consensus       574 v~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~~~--~~~~~~~~l~~~cl~~  645 (706)
                      ||||||+||||+++..+...    +.........      ..+....... ..+.+...++.  .......+|+.+||+.
T Consensus       362 VwSlGviL~el~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~dLi~~mL~~  436 (566)
T PLN03225        362 IYSAGLIFLQMAFPNLRSDS----NLIQFNRQLKRNDYDLVAWRKLVEPR-ASPDLRRGFEVLDLDGGAGWELLKSMMRF  436 (566)
T ss_pred             cHHHHHHHHHHHhCcCCCch----HHHHHHHHHHhcCCcHHHHHHhhccc-cchhhhhhhhhccccchHHHHHHHHHccC
Confidence            99999999999997655321    1111100000      0000000000 00000000000  0111334789999999


Q ss_pred             CCCCCCChhHHHHH
Q 005236          646 YPEDRPCMPSVILM  659 (706)
Q Consensus       646 ~p~~RPt~~ev~~~  659 (706)
                      ||++|||++|+++.
T Consensus       437 dP~kR~ta~e~L~H  450 (566)
T PLN03225        437 KGRQRISAKAALAH  450 (566)
T ss_pred             CcccCCCHHHHhCC
Confidence            99999999999874

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.97  E-value=4.7e-30  Score=279.95  Aligned_cols=263  Identities=20%  Similarity=0.246  Sum_probs=179.4

Q ss_pred             hccCCCccceeccCCceeEEEEEe-----------------CCCcEEEEEEcCccchhhHH--------------HHHHH
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-----------------ADEQEIAVKRLSKISEQGLK--------------ELKNE  433 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~--------------~~~~E  433 (706)
                      ..++|++.++||+|+||.||+|..                 ..++.||||++........+              ....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            357899999999999999999964                 23567999998653322222              23447


Q ss_pred             HHHHhhcCCcce-----eeeEeEEEe--------CCeeEEEEecCCCCChhhhhhcccc---------------------
Q 005236          434 IILFSKLQHRNL-----VKLLGCCIH--------GEEKLLIYEFMPNKSLDSFIFDQER---------------------  479 (706)
Q Consensus       434 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~---------------------  479 (706)
                      +.++.+++|.++     ++++++|..        ....+|||||+++++|.++|+....                     
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777888876654     677777753        3568999999999999999864211                     


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccC
Q 005236          480 CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA  559 (706)
Q Consensus       480 ~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~a  559 (706)
                      ...+++..+..++.|++.+|.|||+.+   |+||||||+|||++.++.+||+|||+++....... .......+++.|+|
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~a  378 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSP  378 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeC
Confidence            123467788899999999999999987   99999999999999999999999999976533211 11112345789999


Q ss_pred             ccccccCCC----------------------CcchhhHHHHHHHHHHHhCCC-CCCCCCCCCc-h---hHHHHHHHHhhc
Q 005236          560 PEYASDGQF----------------------SVKSDVFSFGILLLEIVSGKK-NRGFYHSDNK-L---NLIRHAWKLWNE  612 (706)
Q Consensus       560 PE~~~~~~~----------------------s~~sDv~SlGvil~elltG~~-p~~~~~~~~~-~---~~~~~~~~~~~~  612 (706)
                      ||.+.....                      ..+.||||+||+++||++|.. |+........ .   ......|+....
T Consensus       379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~  458 (507)
T PLN03224        379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG  458 (507)
T ss_pred             hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence            998854321                      134799999999999999875 5432111100 0   011111222211


Q ss_pred             CCCcccccccccCcCCHHHHHHHHHHHHHhcCCCC---CCCCChhHHHHH
Q 005236          613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYP---EDRPCMPSVILM  659 (706)
Q Consensus       613 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p---~~RPt~~ev~~~  659 (706)
                      ...    +....+.    .-....+++..+|..+|   .+|+|++|+++.
T Consensus       459 ~~~----~~~~~d~----~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        459 QKY----DFSLLDR----NKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             cCC----Ccccccc----cChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence            111    1000011    11245678888888765   789999999864

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=7.6e-30  Score=257.13  Aligned_cols=238  Identities=28%  Similarity=0.364  Sum_probs=191.2

Q ss_pred             CceeEEEEEeCC-CcEEEEEEcCccchhh-HHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCChhhhhhc
Q 005236          399 GFGPVYKGTLAD-EQEIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD  476 (706)
Q Consensus       399 ~~g~Vy~~~~~~-~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~  476 (706)
                      +||.||+|+... ++.+++|++....... .+.+.+|+..+++++|+||+++++.+......+++|||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            589999999864 8899999987654444 68899999999999999999999999999999999999999999999865


Q ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccC
Q 005236          477 QERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG  556 (706)
Q Consensus       477 ~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~  556 (706)
                      ...   +++..++.++.+++.++.|||+.+   ++|+||+|+||++++++.++|+|||.+.......   ......++..
T Consensus        81 ~~~---~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~  151 (244)
T smart00220       81 RGR---LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPE  151 (244)
T ss_pred             ccC---CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcC
Confidence            432   788999999999999999999987   9999999999999999999999999998764332   2234567889


Q ss_pred             ccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHH
Q 005236          557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCI  636 (706)
Q Consensus       557 y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  636 (706)
                      |++||.+....++.++||||||+++++|++|..|+....  .....    ............ ...   .   .....+.
T Consensus       152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~--~~~~~----~~~~~~~~~~~~-~~~---~---~~~~~~~  218 (244)
T smart00220      152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD--QLLEL----FKKIGKPKPPFP-PPE---W---KISPEAK  218 (244)
T ss_pred             CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--cHHHH----HHHHhccCCCCc-ccc---c---cCCHHHH
Confidence            999999998889999999999999999999999875421  11111    111111111100 000   0   0123567


Q ss_pred             HHHHHhcCCCCCCCCChhHHHH
Q 005236          637 HIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       637 ~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +++.+|+..+|.+||++.++++
T Consensus       219 ~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      219 DLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHccCCchhccCHHHHhh
Confidence            7999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=2.3e-30  Score=269.65  Aligned_cols=210  Identities=23%  Similarity=0.362  Sum_probs=176.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ...|..++.||-|+||.|.+++-.+ ...+|+|.|++.+   .......+.|-.||.....+-||+|+-.|.+.+.+|+|
T Consensus       628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV  707 (1034)
T KOG0608|consen  628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV  707 (1034)
T ss_pred             ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence            3568888999999999999998655 5568999997743   44556788999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||++||++-.+|-+.   ..+.+..+..++.++..|+++.|..|   +|||||||+|||||.+|++||.||||+.-+.-
T Consensus       708 MdYIPGGDmMSLLIrm---gIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW  781 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLIRM---GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  781 (1034)
T ss_pred             EeccCCccHHHHHHHh---ccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeecccccccee
Confidence            9999999999988543   34677778889999999999999888   99999999999999999999999999864310


Q ss_pred             ----------CC----Ccc--------------------------cccccccccCccCccccccCCCCcchhhHHHHHHH
Q 005236          542 ----------DE----TEG--------------------------NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILL  581 (706)
Q Consensus       542 ----------~~----~~~--------------------------~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil  581 (706)
                                +.    +..                          .....+||+.|+|||++....++..+|.||.||||
T Consensus       782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil  861 (1034)
T KOG0608|consen  782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL  861 (1034)
T ss_pred             ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence                      00    000                          00124799999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchh
Q 005236          582 LEIVSGKKNRGFYHSDNKLN  601 (706)
Q Consensus       582 ~elltG~~p~~~~~~~~~~~  601 (706)
                      |||+.|+.||-...+.+...
T Consensus       862 ~em~~g~~pf~~~tp~~tq~  881 (1034)
T KOG0608|consen  862 YEMLVGQPPFLADTPGETQY  881 (1034)
T ss_pred             HHHhhCCCCccCCCCCccee
Confidence            99999999997666655443

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.5e-30  Score=250.94  Aligned_cols=248  Identities=23%  Similarity=0.342  Sum_probs=195.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  460 (706)
                      .++|.+.++||+|+|..|..++++. .+.+|+|++++.   ..++.+-.+.|-.+.... +||.+|-|..+|..+..+++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            4689999999999999999999854 677899988762   334445556677776665 79999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |.||++||+|--++.++.+   ++++.+..+..+|..||.|||+.+   ||.||||..|+|+|.+|++||.|+|+++.--
T Consensus       329 vieyv~ggdlmfhmqrqrk---lpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l  402 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL  402 (593)
T ss_pred             EEEEecCcceeeehhhhhc---CcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCC
Confidence            9999999999877755443   788888889999999999999998   9999999999999999999999999998621


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCch-hHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL-NLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  619 (706)
                        .....+...+||+.|+|||++++..|....|.|+|||+++||+.|+.||+....++.. +...+..+.+.+...+-  
T Consensus       403 --~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiri--  478 (593)
T KOG0695|consen  403 --GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRI--  478 (593)
T ss_pred             --CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccc--
Confidence              2233456689999999999999999999999999999999999999999865444332 22333334433322210  


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP  651 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  651 (706)
                          ..+.    ..++..+...-|..||.+|.
T Consensus       479 ----prsl----svkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  479 ----PRSL----SVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             ----ccee----ehhhHHHHHHhhcCCcHHhc
Confidence                0011    12345677788999999984

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=5.7e-32  Score=253.22  Aligned_cols=266  Identities=23%  Similarity=0.343  Sum_probs=193.3

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEe--------C
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIH--------G  455 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~  455 (706)
                      ..|.-..+||+|.||.||+|+.++ ++.||+|++-..+  +..-....+|+.++..++|+|++.++..|..        .
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            356666899999999999999854 7778998763322  2223456789999999999999999988753        2


Q ss_pred             CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                      ...++||++|+. +|.-+|.+.  ...++..++.++..++..||.|+|...   |+|||+||.|+||+.+|.+||+|||+
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn~--~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGl  170 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSNR--KVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGL  170 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcCc--cccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccc
Confidence            347999999965 677777432  245788899999999999999999776   99999999999999999999999999


Q ss_pred             ccccCCCCC--cccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc
Q 005236          536 ARAFGGDET--EGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE  612 (706)
Q Consensus       536 a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~  612 (706)
                      ++.+.....  .......+-|..|.+||.+.+ .+++++.|||.-|||+.||.++.+.+..........++......+..
T Consensus       171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk  250 (376)
T KOG0669|consen  171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK  250 (376)
T ss_pred             ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence            987743322  222333456999999999876 57999999999999999999999886544433333334333222222


Q ss_pred             CCCccc-----c-----cccccCcCC-HHH-H------HHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          613 GMPSQL-----I-----DACFKDSFN-LAE-V------IRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       613 ~~~~~~-----~-----d~~~~~~~~-~~~-~------~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..++..     .     .+..++... .++ +      ...++++..++..||.+||.+.+++.
T Consensus       251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence            221111     0     111111111 011 1      14678899999999999999988764

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=3.7e-30  Score=229.22  Aligned_cols=264  Identities=24%  Similarity=0.324  Sum_probs=192.3

Q ss_pred             CCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +|...++||+|.||+||||+..+ ++.||+|+++..  .+..-....+|+-+++.++|.|||+++++...+..+-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            45666899999999999999855 678999988642  333345778999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      |. .+|..+...-  ...++.+.+..++.|+++||.+.|+++   +.|||+||+|.||+.+|++|++|||+++.++-...
T Consensus        83 cd-qdlkkyfdsl--ng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipvr  156 (292)
T KOG0662|consen   83 CD-QDLKKYFDSL--NGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR  156 (292)
T ss_pred             hh-HHHHHHHHhc--CCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence            94 4677666432  245888899999999999999999998   99999999999999999999999999998743211


Q ss_pred             cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCc---ccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPS---QLI  619 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  619 (706)
                        -....+-|.-|.+|.++.+. -|+...|+||-|||+.|+.. |++.|...+.++....+-+......+...+   .+.
T Consensus       157 --cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lp  234 (292)
T KOG0662|consen  157 --CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLP  234 (292)
T ss_pred             --eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCC
Confidence              12234568999999999775 68999999999999999987 444444333333333343333333333222   222


Q ss_pred             cccccCcC----CHHHHH-----HHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSF----NLAEVI-----RCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~----~~~~~~-----~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      |...-..+    ...++.     +=.++....+.-+|..|.++++.++.
T Consensus       235 dyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  235 DYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             CCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence            21111111    111111     11245556666789999998887653

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.96  E-value=2.2e-30  Score=236.03  Aligned_cols=204  Identities=28%  Similarity=0.391  Sum_probs=167.4

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc-cchhhHHHHHHHHHHHhh-cCCcceeeeEeEEEeCCeeEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK-ISEQGLKELKNEIILFSK-LQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ..+...-...||+|++|.|-+-++ .+|+..|+|++.. .+.+..++..+|+.+..+ ..+|.+|.++|........++.
T Consensus        44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc  123 (282)
T KOG0984|consen   44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC  123 (282)
T ss_pred             chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence            345566678999999999999887 5689999999975 355667788889987655 4799999999999999999999


Q ss_pred             EecCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          462 YEFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||.|. .+|+.+-.+- .+...+++..+=+||..+.+||.|||++  +.+||||+||+||||+.+|++||+|||++-.+.
T Consensus       124 ME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~  200 (282)
T KOG0984|consen  124 MELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLV  200 (282)
T ss_pred             HHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence            99994 4776665432 3445688888889999999999999995  469999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCcccccc----CCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASD----GQFSVKSDVFSFGILLLEIVSGKKNRGFY  594 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~sDv~SlGvil~elltG~~p~~~~  594 (706)
                      .+-.   .....|-..|||||.+..    ..|+.|+||||||+.+.||.+++.|++.+
T Consensus       201 dSiA---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  201 DSIA---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             hhhH---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            3221   112356788999999853    37999999999999999999999997644

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=5e-30  Score=276.73  Aligned_cols=245  Identities=25%  Similarity=0.355  Sum_probs=185.6

Q ss_pred             CCccceeccCCce-eEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          389 FSINKKLGEGGFG-PVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       389 ~~~~~~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      |.-.+.+|.|.-| .||+|.. +++.||||++-.   .......+|+..++.- +|||||++++.-.++..+|+..|.| 
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-  585 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence            3444778999887 5799998 678999998743   3345667899999887 5999999999999999999999999 


Q ss_pred             CCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC---C--CCeEEeeeccccccC
Q 005236          467 NKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---D--MNPKISDFGLARAFG  540 (706)
Q Consensus       467 ~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~---~--~~~kl~Dfgla~~~~  540 (706)
                      ..+|.+++... .......-...+.+..|+++||++||+.+   ||||||||+||||+.   +  ..++|+|||+++.+.
T Consensus       586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence            56999999653 11111111344678899999999999977   999999999999976   3  478999999999987


Q ss_pred             CCCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhC-CCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          541 GDETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG-KKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       541 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      .+.... ......||-+|+|||.+....-+.++||||+|||+|+.++| ..||+.....        ...+......-..
T Consensus       663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--------~~NIl~~~~~L~~  734 (903)
T KOG1027|consen  663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--------QANILTGNYTLVH  734 (903)
T ss_pred             CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--------hhhhhcCccceee
Confidence            654432 34557899999999999999889999999999999999996 8888632211        1111111111000


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                          +...  .++  .+.+|+.+|++.+|..||++.+|+
T Consensus       735 ----L~~~--~d~--eA~dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  735 ----LEPL--PDC--EAKDLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             ----eccC--chH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence                1111  111  567899999999999999999996

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=9.1e-31  Score=247.61  Aligned_cols=263  Identities=23%  Similarity=0.315  Sum_probs=193.3

Q ss_pred             ccceeccCCceeEEEEEe-CCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-----CeeEEEE
Q 005236          391 INKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-----EEKLLIY  462 (706)
Q Consensus       391 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~lV~  462 (706)
                      -.+.||.|+||.||.+++ .+|+.|++|++...  +-..-+.+.+|+.++...+|.|++..++.....     .+.|+|.
T Consensus        57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T  136 (449)
T KOG0664|consen   57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT  136 (449)
T ss_pred             CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence            348899999999999998 56999999998653  233456788999999999999999988876543     2557888


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      |.|. .+|...|..   .+.++...+.-+++||++||+|||+.+   |+||||||.|.|++.+..+||+|||+++....+
T Consensus       137 ELmQ-SDLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d  209 (449)
T KOG0664|consen  137 ELMQ-SDLHKIIVS---PQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQR  209 (449)
T ss_pred             HHHH-hhhhheecc---CCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchh
Confidence            8884 467776643   345777777778999999999999998   999999999999999999999999999987666


Q ss_pred             CCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHH--------HhhcC
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK--------LWNEG  613 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~--------~~~~~  613 (706)
                      +....+. .+-|..|.|||.+.+. .|+.+.||||+|||+.||+-.+..|....+-+.++++.....        ..-++
T Consensus       210 ~~~hMTq-EVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG  288 (449)
T KOG0664|consen  210 DRLNMTH-EVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG  288 (449)
T ss_pred             hhhhhHH-HHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence            6555444 4568999999999874 799999999999999999988887765555444444432211        11011


Q ss_pred             CCcccc-----ccccc----CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          614 MPSQLI-----DACFK----DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       614 ~~~~~~-----d~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      --..++     .+.+.    -......-.+.+++...++..||.+|.+..+.+..+.
T Consensus       289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~  345 (449)
T KOG0664|consen  289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY  345 (449)
T ss_pred             hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence            000000     00000    0111111123456777899999999999999887663

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.96  E-value=7.2e-29  Score=229.40  Aligned_cols=255  Identities=23%  Similarity=0.332  Sum_probs=191.7

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCC--eeEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGE--EKLL  460 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~~l  460 (706)
                      ..++|++.+++|+|-|+.||.|.. .+.++++||.++...   .+.+++|+.++..|. ||||++|++...+..  ...|
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            357899999999999999999985 567889999986533   467899999999998 999999999987654  5579


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-CCeEEeeecccccc
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAF  539 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~Dfgla~~~  539 (706)
                      |+||+++.+...+.      ..++...+..++.++++||.|+|+.|   |.|||+||.|++||.. -.++|+|+|+|.+.
T Consensus       113 iFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY  183 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY  183 (338)
T ss_pred             HhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhc
Confidence            99999998887655      34666778889999999999999998   9999999999999965 46999999999987


Q ss_pred             CCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHH----------
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK----------  608 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~----------  608 (706)
                      .....   .+..+.+..|--||.+.. ..|+..-|+|||||+|..|+..+.||-.- .++..+++..+.-          
T Consensus       184 Hp~~e---YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG-~dN~DQLVkIakVLGt~el~~Yl  259 (338)
T KOG0668|consen  184 HPGKE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG-HDNYDQLVKIAKVLGTDELYAYL  259 (338)
T ss_pred             CCCce---eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCC-CCCHHHHHHHHHHhChHHHHHHH
Confidence            54332   233456778889999865 46888999999999999999999997322 2222222222111          


Q ss_pred             -Hhh---cCC------------CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          609 -LWN---EGM------------PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       609 -~~~---~~~------------~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       .+.   ++.            +..++...-+...    ..++++++-..|..|-.+|||++|.+..
T Consensus       260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~----~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLV----SPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             HHHccCCChhHhhHhhccccccHHHhCCccccccC----ChHHHHHHHHHHhhccccccchHHHhcC
Confidence             000   000            0111111111111    1356678889999999999999998753

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.96  E-value=2.5e-27  Score=232.85  Aligned_cols=211  Identities=36%  Similarity=0.563  Sum_probs=182.8

Q ss_pred             eccCCceeEEEEEeCC-CcEEEEEEcCccchh-hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCChhh
Q 005236          395 LGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDS  472 (706)
Q Consensus       395 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~  472 (706)
                      ||+|.+|.||+++..+ ++.+++|++...... ..+.+.+|+..++.++|++|+++++++......+++|||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999865 889999998764432 45688999999999999999999999999999999999999999999


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-CCCeEEeeeccccccCCCCCccccccc
Q 005236          473 FIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDETEGNTNRV  551 (706)
Q Consensus       473 ~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~  551 (706)
                      ++....  ..+++..+..++.++++++.+||+.+   ++|+||+|.||+++. ++.++|+|||.+........  .....
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~  153 (215)
T cd00180          81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTI  153 (215)
T ss_pred             HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcc
Confidence            986542  35788999999999999999999987   999999999999999 89999999999987543221  12234


Q ss_pred             ccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHH
Q 005236          552 VGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLA  630 (706)
Q Consensus       552 ~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  630 (706)
                      .+...|++||.+... ..+.++|+|++|+++++|                                              
T Consensus       154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------  187 (215)
T cd00180         154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------  187 (215)
T ss_pred             cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence            578899999999887 888999999999999999                                              


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          631 EVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       631 ~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                        ..+.+++..|++.+|.+||++.++++.|
T Consensus       188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 --PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             --HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence              3455788899999999999999998754

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.95  E-value=2.5e-28  Score=212.67  Aligned_cols=109  Identities=45%  Similarity=1.029  Sum_probs=104.6

Q ss_pred             eeeCCCCCCcccccc-ccccCcceeEEeecCCeeEEEEEccCCceEEEEEEecccceEEEEEEeccCcceEEEEeccCCC
Q 005236           94 YRSGPWNGLRFSAAT-LRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDL  172 (706)
Q Consensus        94 w~sg~w~g~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~w~~~~~~W~~~~~~p~~~  172 (706)
                      ||+|+|||..|+++| +....++.+.|+.++++.+++|.+.+.++++|++|+.+| ++++|.|++..+.|.+.|++|.|+
T Consensus         1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~~t~~~~~~s~~~r~~ld~~G-~l~~~~w~~~~~~W~~~~~~p~d~   79 (110)
T PF00954_consen    1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVYYTYSLSNSSVLSRLVLDSDG-QLQRYIWNESTQSWSVFWSAPKDQ   79 (110)
T ss_pred             CCccccCCeEECCcccccccceeEEEEEECCCeEEEEEecCCCceEEEEEEeeee-EEEEEEEecCCCcEEEEEEecccC
Confidence            899999999999999 667788999999999999999999999999999999999 899999999999999999999999


Q ss_pred             CccCCCCCCCccccCCCCCcccccCCcccCC
Q 005236          173 CDTYALCGDYGICIISDLPVCQCLKGFKPKS  203 (706)
Q Consensus       173 C~~~~~CG~~g~C~~~~~~~C~C~~Gf~~~~  203 (706)
                      ||+|+.||+||+|+.+..+.|+||+||+|++
T Consensus        80 Cd~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   80 CDVYGFCGPNGICNSNNSPKCSCLPGFEPKN  110 (110)
T ss_pred             CCCccccCCccEeCCCCCCceECCCCcCCCc
Confidence            9999999999999988889999999999975

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.7e-27  Score=240.23  Aligned_cols=131  Identities=28%  Similarity=0.417  Sum_probs=109.7

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-----Cc---ceeeeEeEEEe---
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-----HR---NLVKLLGCCIH---  454 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~---niv~l~~~~~~---  454 (706)
                      .+|.+.++||.|.|++||++.+. +.+.||+|+.+. .....+....|+.+|++++     |+   .||+|++.|..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            68999999999999999999884 467899998853 3344567789999999884     33   59999999975   


Q ss_pred             -CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          455 -GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       455 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                       +.+.+||+|++ |.+|..+|.... ..-++...+.+|+.||+.||.|||.++  .|||-||||+|||+
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl  221 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL  221 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence             56899999999 667878775433 345889999999999999999999987  69999999999998

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.95  E-value=2.6e-28  Score=252.80  Aligned_cols=196  Identities=29%  Similarity=0.399  Sum_probs=167.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccch--------hhHHHHHHHHHHHhhcC---CcceeeeEeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISE--------QGLKELKNEIILFSKLQ---HRNLVKLLGCCI  453 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---h~niv~l~~~~~  453 (706)
                      ..+|+..+.+|.|+||.|+.+.++. ...|+||.+.+..-        ..+-.+-.|+.+|..++   |+||++++++|+
T Consensus       560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE  639 (772)
T KOG1152|consen  560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE  639 (772)
T ss_pred             cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence            3568999999999999999999865 56788898765211        11223557999999997   999999999999


Q ss_pred             eCCeeEEEEecC-CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          454 HGEEKLLIYEFM-PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       454 ~~~~~~lV~e~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                      +.+.+||+||-. ++-+|.++|..+.   .+++.+...|+.|++.|+++||+++   |||||||-+||.|+.+|-+||+|
T Consensus       640 ddd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klid  713 (772)
T KOG1152|consen  640 DDDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLID  713 (772)
T ss_pred             cCCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEee
Confidence            999999999977 4668999996544   4888999999999999999999999   99999999999999999999999


Q ss_pred             eccccccCCCCCcccccccccccCccCccccccCCCC-cchhhHHHHHHHHHHHhCCCCC
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFS-VKSDVFSFGILLLEIVSGKKNR  591 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDv~SlGvil~elltG~~p~  591 (706)
                      ||.|....+    ......+||..|.|||++.+.+|- ...|||++|++||.++....|+
T Consensus       714 fgsaa~~ks----gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy  769 (772)
T KOG1152|consen  714 FGSAAYTKS----GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY  769 (772)
T ss_pred             ccchhhhcC----CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence            999987543    334558899999999999998875 5689999999999999888885

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=5.2e-28  Score=247.40  Aligned_cols=267  Identities=19%  Similarity=0.171  Sum_probs=202.6

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcC------CcceeeeEeEEEeCC
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQ------HRNLVKLLGCCIHGE  456 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~~  456 (706)
                      ....+|.+.-..|+|-|++|.+|.+. .|+.||||++... +.-.+.=+.|+++|.+|+      .-|+++|+..|...+
T Consensus       429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn  507 (752)
T KOG0670|consen  429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN  507 (752)
T ss_pred             hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence            34468888889999999999999984 4889999999653 333455578999999996      347999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-CCeEEeeecc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGL  535 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~Dfgl  535 (706)
                      +++||+|-+ .-+|.+.|......-.+....+..++.|+..||..|-..+   |+|.||||.||||++. ..+||||||.
T Consensus       508 HLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGS  583 (752)
T KOG0670|consen  508 HLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGS  583 (752)
T ss_pred             eeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCcc
Confidence            999999988 4589999987666667888899999999999999999887   9999999999999976 4689999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      |...+.++    ...+.-+..|.|||++.+.+|+...|+||+||.||||.||+..|........+.+.-.....+...++
T Consensus       584 A~~~~ene----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml  659 (752)
T KOG0670|consen  584 ASFASENE----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML  659 (752)
T ss_pred             cccccccc----ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence            98754332    23355677899999999999999999999999999999999987654443333332221111110000


Q ss_pred             ---------------------------------------ccccccccc----CcCCHHHHHHHHHHHHHhcCCCCCCCCC
Q 005236          616 ---------------------------------------SQLIDACFK----DSFNLAEVIRCIHIGLLCVQQYPEDRPC  652 (706)
Q Consensus       616 ---------------------------------------~~~~d~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~RPt  652 (706)
                                                             .++...++.    .......+..+.+|+-.|+..||++|.|
T Consensus       660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit  739 (752)
T KOG0670|consen  660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT  739 (752)
T ss_pred             hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence                                                   000000000    0112233446778899999999999999


Q ss_pred             hhHHHHH
Q 005236          653 MPSVILM  659 (706)
Q Consensus       653 ~~ev~~~  659 (706)
                      ..++++.
T Consensus       740 ~nqAL~H  746 (752)
T KOG0670|consen  740 VNQALKH  746 (752)
T ss_pred             HHHHhcC
Confidence            9998753

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.94  E-value=2.4e-26  Score=229.00  Aligned_cols=198  Identities=33%  Similarity=0.474  Sum_probs=172.1

Q ss_pred             CCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchh-hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          389 FSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      |.+.+.||.|++|.||++...+ ++.+++|.+...... ..+.+.+|+..+++++|+|++++++++......++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            5677899999999999999975 889999999765444 67889999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++.....  .+++..+..++.+++.++.+||+.+   ++|+||+|.||+++.++.++|+|||++........ .
T Consensus        81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~  154 (225)
T smart00221       81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-A  154 (225)
T ss_pred             CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-c
Confidence            9999999865332  1788899999999999999999987   99999999999999999999999999987643321 1


Q ss_pred             cccccccccCccCcccc-ccCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 005236          547 NTNRVVGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGKKNRG  592 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~-~~~~~s~~sDv~SlGvil~elltG~~p~~  592 (706)
                      ......++..|++||.+ ....++.++|||+||++++||++|+.||.
T Consensus       155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~  201 (225)
T smart00221      155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS  201 (225)
T ss_pred             cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence            22335678899999998 66788889999999999999999999973

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=2.4e-27  Score=230.27  Aligned_cols=261  Identities=25%  Similarity=0.255  Sum_probs=191.7

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC------e
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE------E  457 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~  457 (706)
                      .+|.-.+.+|.|.- .|..+.+ -.++.||+|++..  ......+...+|..++..++|+||++++.++....      +
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence            46777788888888 5555554 3588999998754  33455677889999999999999999999997543      5


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .|+|||+| ..+|...+.     -.++-.++.+|+.|++.|++|||+.+   |+||||||+||++..+..+||.|||+|+
T Consensus        96 ~y~v~e~m-~~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar  166 (369)
T KOG0665|consen   96 VYLVMELM-DANLCQVIL-----MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLAR  166 (369)
T ss_pred             HHHHHHhh-hhHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhc
Confidence            68999999 458888775     23677888899999999999999988   9999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHH------------
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH------------  605 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~------------  605 (706)
                      .-..+   ......+.|..|.|||++.+..+.+.+||||+||++.||++|+.-|...+.-+....+..            
T Consensus       167 ~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q  243 (369)
T KOG0665|consen  167 TEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ  243 (369)
T ss_pred             ccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence            74322   344557889999999999999999999999999999999999977642211111111100            


Q ss_pred             ----HHHHhh------cCCCcc-cccccccCc--CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          606 ----AWKLWN------EGMPSQ-LIDACFKDS--FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       606 ----~~~~~~------~~~~~~-~~d~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                          ++....      .-...+ +.|..+...  .+..+...+.+++.+||-.+|++|.+++++++.-
T Consensus       244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP  311 (369)
T KOG0665|consen  244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP  311 (369)
T ss_pred             hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence                010000      000111 112222111  1112233455789999999999999999998764

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.93  E-value=2.7e-27  Score=249.27  Aligned_cols=254  Identities=24%  Similarity=0.363  Sum_probs=199.9

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ..++|++...+|.|.||.|||+++. .++..|+|.++.....+...++.|+-+++..+|||||.+++.+...+.+++.||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            3478999999999999999999985 588899999987777778889999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      ||.+|+|.+.-+-.   ..+++.++.+..++..+||+|||+++   -+|||||-.|||+++.|.+|++|||.+-.+..  
T Consensus        93 ycgggslQdiy~~T---gplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqita--  164 (829)
T KOG0576|consen   93 YCGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITA--  164 (829)
T ss_pred             ecCCCcccceeeec---ccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhh--
Confidence            99999999876432   45777788888899999999999998   79999999999999999999999999876532  


Q ss_pred             CcccccccccccCccCcccc---ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYA---SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~---~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      .........||+.|||||+.   +.+.|..++|||++|+...|+---++|.-..++.....+...     ....+     
T Consensus       165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTk-----S~~qp-----  234 (829)
T KOG0576|consen  165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTK-----SGFQP-----  234 (829)
T ss_pred             hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhc-----cCCCC-----
Confidence            22233447899999999987   356799999999999999999888777432222111111100     01111     


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +.+++.-...  ..+-+++..|+..+|.+||+++.+++
T Consensus       235 p~lkDk~kws--~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  235 PTLKDKTKWS--EFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             CcccCCccch--HHHHHHHHHHhcCCCccCCChhhhee
Confidence            1122222221  23446888999999999999988764

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.92  E-value=1.4e-25  Score=226.20  Aligned_cols=201  Identities=26%  Similarity=0.448  Sum_probs=167.0

Q ss_pred             HHHhccCCCccceeccCCceeEEEEEeC----CCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCC
Q 005236          382 IANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGE  456 (706)
Q Consensus       382 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~  456 (706)
                      +....+.|..+++||.|.|++||++++.    ....||+|.+...+.  ...+.+|++++..+. +.||+++.+++..++
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            3445578899999999999999999874    367899999866443  356899999999995 999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-CCCeEEeeecc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGL  535 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgl  535 (706)
                      ...+|+||++.....+++..      ++..++..+++.+.+||+++|.+|   ||||||||+|+|.+. -+.-.|+|||+
T Consensus       109 ~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL  179 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL  179 (418)
T ss_pred             eeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence            99999999999999988843      668888999999999999999998   999999999999985 46789999999


Q ss_pred             ccccCCCC-------------Cc-----------------------------ccccccccccCccCcccccc-CCCCcch
Q 005236          536 ARAFGGDE-------------TE-----------------------------GNTNRVVGTYGYMAPEYASD-GQFSVKS  572 (706)
Q Consensus       536 a~~~~~~~-------------~~-----------------------------~~~~~~~gt~~y~aPE~~~~-~~~s~~s  572 (706)
                      |.......             ..                             .......||++|.|||++.. ...+.++
T Consensus       180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai  259 (418)
T KOG1167|consen  180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI  259 (418)
T ss_pred             HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence            98321000             00                             00112469999999999866 4678999


Q ss_pred             hhHHHHHHHHHHHhCCCCCCC
Q 005236          573 DVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       573 Dv~SlGvil~elltG~~p~~~  593 (706)
                      ||||.|||++-+++++.||-.
T Consensus       260 Diws~GVI~Lslls~~~PFf~  280 (418)
T KOG1167|consen  260 DIWSAGVILLSLLSRRYPFFK  280 (418)
T ss_pred             ceeeccceeehhhcccccccc
Confidence            999999999999999999744

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=3e-25  Score=210.56  Aligned_cols=254  Identities=21%  Similarity=0.326  Sum_probs=185.5

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEe-EEEeCCeeEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLG-CCIHGEEKLLI  461 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~-~~~~~~~~~lV  461 (706)
                      ..+.|.+.+.||+|.||.+-++.++. .+.+|+|.+.+.. ...++|.+|...--.| .|.||+.-|+ .|...+.++++
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            34789999999999999999999865 6788999886532 3457888888765555 5899998775 46667788899


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc--CCCCeEEeeecccccc
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD--QDMNPKISDFGLARAF  539 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~--~~~~~kl~Dfgla~~~  539 (706)
                      +||++.|+|..-+..    ..+-+....+++.|++.|+.|||+++   +||||||.+||||-  +..++||+|||+.+..
T Consensus       101 qE~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKV  173 (378)
T ss_pred             eccCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeeccccccc
Confidence            999999999887743    33666777889999999999999998   99999999999994  4458999999998764


Q ss_pred             CCCCCcccccccccccCccCccccccC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDG-----QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      +.-.     ....-+..|-+||.....     ...+.+|||.||++++.++||..|+.-.   .......+.+..|..+.
T Consensus       174 g~tV-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka---~~~d~~Y~~~~~w~~rk  245 (378)
T KOG1345|consen  174 GTTV-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA---SIMDKPYWEWEQWLKRK  245 (378)
T ss_pred             Ccee-----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh---hccCchHHHHHHHhccc
Confidence            3211     112345679999987543     3467899999999999999999998632   22233344455555444


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                      ...+.+.  -..+.    .++.++-.+-+..++++|=...++.++.
T Consensus       246 ~~~~P~~--F~~fs----~~a~r~Fkk~lt~~~~drcki~~~kk~r  285 (378)
T KOG1345|consen  246 NPALPKK--FNPFS----EKALRLFKKSLTPRFKDRCKIWTAKKMR  285 (378)
T ss_pred             CccCchh--hcccC----HHHHHHHHHhcCCcccccchhHHHHHHH
Confidence            4332221  11122    1344556678999999996555555544

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=1.6e-25  Score=263.56  Aligned_cols=197  Identities=17%  Similarity=0.205  Sum_probs=137.3

Q ss_pred             hcCC-cceeeeEeEE-------EeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCce
Q 005236          439 KLQH-RNLVKLLGCC-------IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI  510 (706)
Q Consensus       439 ~l~h-~niv~l~~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i  510 (706)
                      .++| +||+++++.|       .+.+..++++||+ +++|.++|...  ...+++.+++.++.||++||.|||+++   |
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~g---I  101 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQG---I  101 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            4556 5788888877       2334567888987 66999999643  245899999999999999999999988   9


Q ss_pred             EecccCCCcEEEcCCC-------------------CeEEeeeccccccCCCCC--------------cccccccccccCc
Q 005236          511 IHRDLKASNVLLDQDM-------------------NPKISDFGLARAFGGDET--------------EGNTNRVVGTYGY  557 (706)
Q Consensus       511 vH~Dikp~Nill~~~~-------------------~~kl~Dfgla~~~~~~~~--------------~~~~~~~~gt~~y  557 (706)
                      +||||||+||||+..+                   .+||+|||+++.......              ........||+.|
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  181 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY  181 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence            9999999999996544                   455666666553211000              0001123578889


Q ss_pred             cCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHH
Q 005236          558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIH  637 (706)
Q Consensus       558 ~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  637 (706)
                      ||||++.+..++.++|||||||+||||++|..|+...     .........    ..    ..+..     .........
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~-----~~~~~~~~~----~~----~~~~~-----~~~~~~~~~  243 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK-----SRTMSSLRH----RV----LPPQI-----LLNWPKEAS  243 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH-----HHHHHHHHH----hh----cChhh-----hhcCHHHHH
Confidence            9999999999999999999999999999988774311     111111110    00    01000     111223457


Q ss_pred             HHHHhcCCCCCCCCChhHHHHH
Q 005236          638 IGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       638 l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ++.+||+.+|.+||+|.||++.
T Consensus       244 ~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        244 FCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             HHHHhCCCChhhCcChHHHhhc
Confidence            7889999999999999999763

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.91  E-value=7e-24  Score=203.19  Aligned_cols=168  Identities=17%  Similarity=0.168  Sum_probs=123.8

Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      |+|.+++...  ...+++..++.++.||++||+|||+.+         ||+|||++.++.+|+  ||+++......    
T Consensus         1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~----   63 (176)
T smart00750        1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ----   63 (176)
T ss_pred             CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc----
Confidence            6899999643  245899999999999999999999875         999999999999999  99998753221    


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSF  627 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  627 (706)
                         ..||+.|||||++.+..++.++|||||||++|||++|+.|+......  ...................     ....
T Consensus        64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~  133 (176)
T smart00750       64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL--SAILEILLNGMPADDPRDR-----SNLE  133 (176)
T ss_pred             ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--cHHHHHHHHHhccCCcccc-----ccHH
Confidence               25889999999999999999999999999999999999997532211  1111111111111110000     0000


Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          628 NLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       628 ~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ...+...+.+++..||+.+|.+||++.|+++.+..
T Consensus       134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~  168 (176)
T smart00750      134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRA  168 (176)
T ss_pred             HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence            11111257889999999999999999999998754

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=2.2e-23  Score=218.37  Aligned_cols=176  Identities=21%  Similarity=0.211  Sum_probs=135.3

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeC--CCcEEEEEEcCcc-----chhhHHHHHHHHHHHhhcCCcceee-eEeEEEe
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLA--DEQEIAVKRLSKI-----SEQGLKELKNEIILFSKLQHRNLVK-LLGCCIH  454 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~  454 (706)
                      ....++|.+.+.||+|+||+||+|+..  +++.+|||++...     .....+.+.+|+.++++++|+|+++ ++.    
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----   89 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----   89 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----
Confidence            344578999999999999999999874  4677899986532     2233567999999999999999985 443    


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEeccc-CCCcEEEcCCCCeEEeee
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDL-KASNVLLDQDMNPKISDF  533 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Di-kp~Nill~~~~~~kl~Df  533 (706)
                      ....++||||+++++|.. +. ..     .   ...++.+++++|.|||+.+   |+|||| ||+|||++.++.+||+||
T Consensus        90 ~~~~~LVmE~~~G~~L~~-~~-~~-----~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDF  156 (365)
T PRK09188         90 TGKDGLVRGWTEGVPLHL-AR-PH-----G---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDF  156 (365)
T ss_pred             cCCcEEEEEccCCCCHHH-hC-cc-----c---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEEC
Confidence            246899999999999963 21 10     1   1457889999999999988   999999 999999999999999999


Q ss_pred             ccccccCCCCCccc------ccccccccCccCccccccCC------CCcchhhH
Q 005236          534 GLARAFGGDETEGN------TNRVVGTYGYMAPEYASDGQ------FSVKSDVF  575 (706)
Q Consensus       534 gla~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~------~s~~sDv~  575 (706)
                      |+|+.+........      .....+++.|+|||.+....      .+..+|-|
T Consensus       157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             ccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            99998754322111      12456888999999996542      33446666

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.90  E-value=2.2e-22  Score=211.66  Aligned_cols=259  Identities=23%  Similarity=0.267  Sum_probs=192.2

Q ss_pred             CCCccceeccCCceeEEEEEeCCC--cEEEEEEcCccchhhHHHHHHHHHHHhhcCC----cceeeeEeEE-EeCCeeEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLADE--QEIAVKRLSKISEQGLKELKNEIILFSKLQH----RNLVKLLGCC-IHGEEKLL  460 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l  460 (706)
                      +|.+.++||+|+||.||++.....  ..+|+|............+..|..++..+.+    +++.++++.. ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            899999999999999999998664  4788887755433333378889999988873    5899999988 47778899


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-----CCeEEeeecc
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-----MNPKISDFGL  535 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-----~~~kl~Dfgl  535 (706)
                      ||+.+ |.+|.++..... ...++..+.++|+.|++.+|++||+.+   ++||||||.|+++...     ..+.|.|||+
T Consensus        99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence            99987 889999775544 466899999999999999999999998   9999999999999865     4699999999


Q ss_pred             cc--ccCCCCC----cc-c-ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH
Q 005236          536 AR--AFGGDET----EG-N-TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       536 a~--~~~~~~~----~~-~-~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ++  .+.....    .. . .....||.+|+++..+.+.+.+.+.|+||++.++.|++.|..|+................
T Consensus       174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~  253 (322)
T KOG1164|consen  174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP  253 (322)
T ss_pred             CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence            99  3322211    11 1 223569999999999999999999999999999999999999985544322221111111


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .   ......      .......+..   ++...+-..+..++|....+...|...
T Consensus       254 ~---~~~~~~------~~~~~~~~~~---~~~~~~~~~~~~~~Pdy~~~~~~l~~~  297 (322)
T KOG1164|consen  254 R---KLLTDR------FGDLKPEEFA---KILEYIDSLDYEDKPDYEKLAELLKDV  297 (322)
T ss_pred             h---hhcccc------ccCCChHHHH---HHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence            1   111100      0111222333   333344447899999999999988655

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.87  E-value=4.2e-23  Score=195.79  Aligned_cols=251  Identities=21%  Similarity=0.305  Sum_probs=187.0

Q ss_pred             CCCccceeccCCceeEEEEEeCCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      +..+..+|.+...|..|+|+++. ..+++|++..  ......+.|..|.-.++.+.||||+++++.|....++.++..||
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m  269 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM  269 (448)
T ss_pred             hhhhhhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence            34455789999999999999954 4566777643  23333467888998999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      +.|+|...|++... -..+..+..+++..||+|++|||+..+ -|.---|.+..++||++.+++|+- +-+++      .
T Consensus       270 p~gslynvlhe~t~-vvvd~sqav~faldiargmaflhslep-~ipr~~lns~hvmidedltarism-ad~kf------s  340 (448)
T KOG0195|consen  270 PFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLEP-MIPRFYLNSKHVMIDEDLTARISM-ADTKF------S  340 (448)
T ss_pred             cchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcch-hhhhhhcccceEEecchhhhheec-cccee------e
Confidence            99999999987543 346778889999999999999999863 244456899999999999988742 11111      0


Q ss_pred             ccccccccccCccCccccccCCCC---cchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFS---VKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s---~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .......-.+.||+||.+...+-+   .++|+|||+++||||.|.+.||....+-+-.-.+      ..++....+    
T Consensus       341 fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki------aleglrv~i----  410 (448)
T KOG0195|consen  341 FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI------ALEGLRVHI----  410 (448)
T ss_pred             eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh------hhccccccC----
Confidence            011112346899999999876543   5799999999999999999999876654332111      112211111    


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                           ++-....+.+++.-|+..||.+||.+..|+-.|+.-
T Consensus       411 -----ppgis~hm~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  411 -----PPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             -----CCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence                 111123466788899999999999999999988753

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.87  E-value=1.6e-20  Score=197.92  Aligned_cols=262  Identities=29%  Similarity=0.373  Sum_probs=196.6

Q ss_pred             CCccceeccCCceeEEEEEeCCCcEEEEEEcCccchh---hHHHHHHHHHHHhhcCCc-ceeeeEeEEEeCCeeEEEEec
Q 005236          389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQ---GLKELKNEIILFSKLQHR-NLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lV~e~  464 (706)
                      |.+.+.||.|+||.||++...  ..+++|.+......   ....+.+|+.+++.+.|+ +|+++.+.+......++++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            677899999999999999987  78899988653322   467899999999999988 799999999777778999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-CeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfgla~~~~~~~  543 (706)
                      +.+++|.+++........+.......++.|++.++.|+|..+   ++|||+||+||+++..+ .++++|||+++.+....
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            999999977643321125788889999999999999999988   99999999999999998 79999999998654433


Q ss_pred             Ccc----cccccccccCccCcccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          544 TEG----NTNRVVGTYGYMAPEYASD---GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       544 ~~~----~~~~~~gt~~y~aPE~~~~---~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      ...    ......|+..|+|||.+..   ...+...|+||+|++++++++|..|+......   ................
T Consensus       157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~  233 (384)
T COG0515         157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTP  233 (384)
T ss_pred             ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCc
Confidence            221    2355789999999999987   57899999999999999999999995443321   0011111111111111


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .. ...............+.+++..|+..+|..|.++.+....
T Consensus       234 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         234 SL-ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             cc-ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            00 0000000001122345678889999999999999987764

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.85  E-value=5.1e-21  Score=179.00  Aligned_cols=212  Identities=20%  Similarity=0.298  Sum_probs=173.5

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCC-cceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH-RNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ...|.++++||.|+||.+|.|.. .+|.+||||.-+.....  -++..|..+...|+| ..|..+..+..++..-.+|||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            46899999999999999999986 67999999986543322  356788999999975 678888899999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC---CCeEEeeeccccccC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLARAFG  540 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~---~~~kl~Dfgla~~~~  540 (706)
                      .+ |-+|.+++.-..  ..++..+++-+|-|++.-++|+|..+   +|||||||+|+|..-+   ..+.|+|||+|+.+.
T Consensus        92 LL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~  165 (341)
T KOG1163|consen   92 LL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR  165 (341)
T ss_pred             cc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhc
Confidence            98 778888875433  23778899999999999999999988   9999999999999644   458999999999875


Q ss_pred             CCCCc-----ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHH
Q 005236          541 GDETE-----GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH  605 (706)
Q Consensus       541 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~  605 (706)
                      .....     .......||.+|.+-....+.+.+.+.|+-|+|.+|..+.-|..||............+.
T Consensus       166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEk  235 (341)
T KOG1163|consen  166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEK  235 (341)
T ss_pred             cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHH
Confidence            43222     122346799999999988888999999999999999999999999977665544444333

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=8.9e-22  Score=219.81  Aligned_cols=252  Identities=23%  Similarity=0.274  Sum_probs=184.4

Q ss_pred             CccceeccCCceeEEEEEeCC-CcEEEEEEcC-----ccchhh-HHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          390 SINKKLGEGGFGPVYKGTLAD-EQEIAVKRLS-----KISEQG-LKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~-----~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .....+|.|++|.|+...... ....+.|...     ...... ...+..|+-+-..++|||++..+..+.+.....-+|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            455899999999887776532 3323333321     112211 223667888888999999988888777777666679


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++ +|..++...   ..+...++..++.|+..|++|||+.+   |.|||+|++|+++..+|.+||+|||.+..+...
T Consensus       401 E~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~  473 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYP  473 (601)
T ss_pred             hcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccC
Confidence            99999 999988554   34677788889999999999999998   999999999999999999999999999877544


Q ss_pred             CCc--ccccccccccCccCccccccCCCCc-chhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          543 ETE--GNTNRVVGTYGYMAPEYASDGQFSV-KSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       543 ~~~--~~~~~~~gt~~y~aPE~~~~~~~s~-~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ...  ......+|+..|+|||++.+..|.+ ..||||.|+++..|++|+.||......+....      .........+.
T Consensus       474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~------~~~~~~~~~~~  547 (601)
T KOG0590|consen  474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK------TNNYSDQRNIF  547 (601)
T ss_pred             cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh------hhccccccccc
Confidence            333  4455678999999999999999986 48999999999999999999866544333210      00000000000


Q ss_pred             cccccCcCCH--HHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          620 DACFKDSFNL--AEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       620 d~~~~~~~~~--~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .    +...+  ....+...++..+|+.+|.+|.||++|++
T Consensus       548 ~----~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  548 E----GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             c----ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            0    00111  11224567889999999999999999975

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.84  E-value=3.8e-20  Score=180.91  Aligned_cols=206  Identities=21%  Similarity=0.342  Sum_probs=171.0

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      -+|++.++||+|.||+++.|+. -+++.||||.-...++  .-++..|....+.|. .++|...+-+..++-+-.||+|.
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL  105 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL  105 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence            4899999999999999999986 5789999997654333  246778888888885 78999999888889999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-----CCeEEeeecccccc
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-----MNPKISDFGLARAF  539 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-----~~~kl~Dfgla~~~  539 (706)
                      + |-+|.+++.=..  ..++.+++..+|.|++.-++|+|++.   +|.|||||+|+||...     ..+.|+|||+|+.+
T Consensus       106 L-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y  179 (449)
T KOG1165|consen  106 L-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY  179 (449)
T ss_pred             h-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence            8 678887764222  34788999999999999999999998   9999999999999644     45899999999987


Q ss_pred             CCCCCcc-----cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005236          540 GGDETEG-----NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL  600 (706)
Q Consensus       540 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~  600 (706)
                      ....+..     ......||.+||+-....+.+.+.+.|+-|+|-++...|-|..||.....+...
T Consensus       180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK  245 (449)
T KOG1165|consen  180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK  245 (449)
T ss_pred             cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH
Confidence            5433221     223356999999999999999999999999999999999999999876655443

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.84  E-value=4.1e-21  Score=186.96  Aligned_cols=171  Identities=15%  Similarity=0.188  Sum_probs=133.1

Q ss_pred             hccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhh---HHH------HHHHHHHHhhcCCcceeeeEeEEEeC
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG---LKE------LKNEIILFSKLQHRNLVKLLGCCIHG  455 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~------~~~E~~~l~~l~h~niv~l~~~~~~~  455 (706)
                      ..++|++.++||.|+||.||.... ++..+|||.+.......   ...      +.+|+..+.+++||+|..+..++...
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            357999999999999999999766 57789999996532222   222      67899999999999999999886643


Q ss_pred             --------CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC
Q 005236          456 --------EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN  527 (706)
Q Consensus       456 --------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~  527 (706)
                              ...++||||++|.+|.++..       ++.    ....+++.+|..+|..+   ++|||+||+||++++++ 
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-  172 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-  172 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-
Confidence                    35789999999999988741       222    24568999999999988   99999999999999998 


Q ss_pred             eEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHH
Q 005236          528 PKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIV  585 (706)
Q Consensus       528 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ell  585 (706)
                      ++|+|||.......+...              ..+.....+..++|+||||+.+..+.
T Consensus       173 i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        173 LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence            999999988754211111              11344455678999999999987654

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.83  E-value=3e-20  Score=179.17  Aligned_cols=139  Identities=19%  Similarity=0.165  Sum_probs=108.3

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCccchh--h------------------------HHHHHHHHHHHhhcCCcce
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQ--G------------------------LKELKNEIILFSKLQHRNL  445 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~ni  445 (706)
                      ...||+|+||.||+|...+|+.||||+++.....  .                        ......|+..+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4789999999999999888999999998643110  0                        1123459999999988776


Q ss_pred             eeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHH-HhCCCCceEecccCCCcEEEcC
Q 005236          446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL-HQDSRLRIIHRDLKASNVLLDQ  524 (706)
Q Consensus       446 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~L-H~~~~~~ivH~Dikp~Nill~~  524 (706)
                      .....+..  ...++||||+++++|...+...   ..++......++.|++.+|.+| |+.+   |+||||||+|||++ 
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-  152 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-  152 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-
Confidence            44333222  2348999999998876553222   3478889999999999999999 6777   99999999999998 


Q ss_pred             CCCeEEeeecccccc
Q 005236          525 DMNPKISDFGLARAF  539 (706)
Q Consensus       525 ~~~~kl~Dfgla~~~  539 (706)
                      ++.++|+|||+|...
T Consensus       153 ~~~v~LiDFG~a~~~  167 (190)
T cd05147         153 DGKLYIIDVSQSVEH  167 (190)
T ss_pred             CCcEEEEEccccccC
Confidence            478999999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.81  E-value=8e-21  Score=210.84  Aligned_cols=252  Identities=16%  Similarity=0.170  Sum_probs=179.2

Q ss_pred             CCCccceeccCCceeEEEEEeCCCcEEEEEEcCccc-hhhHHHHHHHHHH--HhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS-EQGLKELKNEIIL--FSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++...+.||.+.|=+|.++++++|. |+||++-+.. ...++.++++++-  ...++|||.+++.-.-......|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            5677799999999999999998886 8999875533 3334444443333  5566899999988776666677888888


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC--C
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG--D  542 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~--~  542 (706)
                      +.+ +|.+.|-   .+..+...+...|+.|+++||...|..+   |.|+|||.+||||+.-.-+.|+||..-+...-  +
T Consensus       103 vkh-nLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD  175 (1431)
T KOG1240|consen  103 VKH-NLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPED  175 (1431)
T ss_pred             Hhh-hhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence            844 7777773   3455777788889999999999999988   99999999999999999999999998765321  1


Q ss_pred             C---CcccccccccccCccCccccccC----------C-CCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHH
Q 005236          543 E---TEGNTNRVVGTYGYMAPEYASDG----------Q-FSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       543 ~---~~~~~~~~~gt~~y~aPE~~~~~----------~-~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  607 (706)
                      .   ..........-..|+|||.+...          . .+++.||||+||++.||++ |+++|..      .++..+..
T Consensus       176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L------SQL~aYr~  249 (1431)
T KOG1240|consen  176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL------SQLLAYRS  249 (1431)
T ss_pred             CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH------HHHHhHhc
Confidence            1   11122233455689999988441          2 6789999999999999988 6777642      11111111


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                           +. .......++.-.+    ..+..+++.|++.||.+|-++++.++.-++.
T Consensus       250 -----~~-~~~~e~~Le~Ied----~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  250 -----GN-ADDPEQLLEKIED----VSLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             -----cC-ccCHHHHHHhCcC----ccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence                 00 0000000100000    1345788999999999999999999886554

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.81  E-value=2.2e-19  Score=173.88  Aligned_cols=140  Identities=19%  Similarity=0.210  Sum_probs=110.8

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCccchh--------------------------hHHHHHHHHHHHhhcCCcce
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQ--------------------------GLKELKNEIILFSKLQHRNL  445 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~h~ni  445 (706)
                      ...||+|+||.||+|+..+|+.||||++......                          ....+..|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999888999999998653210                          01234678999999999987


Q ss_pred             eeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecccCCCcEEEcC
Q 005236          446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ-DSRLRIIHRDLKASNVLLDQ  524 (706)
Q Consensus       446 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dikp~Nill~~  524 (706)
                      .....+...  ..++||||++++++.......   ..++......++.|++.++.+||+ .+   |+||||||+|||++ 
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-  152 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-  152 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-
Confidence            544444332  348999999998654432221   246778889999999999999999 77   99999999999999 


Q ss_pred             CCCeEEeeeccccccC
Q 005236          525 DMNPKISDFGLARAFG  540 (706)
Q Consensus       525 ~~~~kl~Dfgla~~~~  540 (706)
                      ++.++|+|||++..+.
T Consensus       153 ~~~~~liDFG~a~~~~  168 (190)
T cd05145         153 DGKPYIIDVSQAVELD  168 (190)
T ss_pred             CCCEEEEEcccceecC
Confidence            8999999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.80  E-value=2.3e-19  Score=191.09  Aligned_cols=216  Identities=24%  Similarity=0.331  Sum_probs=162.2

Q ss_pred             HhhcCCcceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccC
Q 005236          437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLK  516 (706)
Q Consensus       437 l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik  516 (706)
                      |+.+.|.|+.+++|.+.++...+.|.+|+..|+|.+.+...  ...+++.....++..|++||+|||+..  -..|+.++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~   76 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALK   76 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeec
Confidence            35689999999999999999999999999999999999763  345889999999999999999999865  23999999


Q ss_pred             CCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccC-------CCCcchhhHHHHHHHHHHHhCCC
Q 005236          517 ASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-------QFSVKSDVFSFGILLLEIVSGKK  589 (706)
Q Consensus       517 p~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~~sDv~SlGvil~elltG~~  589 (706)
                      +.|++++....+||+|||+.................-..-|.|||.++..       ..+.+.||||||++++|+++.+.
T Consensus        77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~  156 (484)
T KOG1023|consen   77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG  156 (484)
T ss_pred             cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence            99999999999999999998876431111111122345679999999764       25778999999999999999999


Q ss_pred             CCCCCCCCCc-hhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          590 NRGFYHSDNK-LNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       590 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ||........ .+.+............+.+..     ..  +....+..++..||..+|.+||++++|-..++..
T Consensus       157 ~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~-----~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~  224 (484)
T KOG1023|consen  157 PFDLRNLVEDPDEIILRVKKGGSNPFRPSIEL-----LN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI  224 (484)
T ss_pred             ccccccccCChHHHHHHHHhcCCCCcCcchhh-----hh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence            9876443332 233333222111111111111     10  1122567788999999999999999999988865

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.80  E-value=1.1e-18  Score=165.99  Aligned_cols=184  Identities=18%  Similarity=0.177  Sum_probs=138.9

Q ss_pred             CccceeccCCceeEEEEEeCCCcEEEEEEcCccch----hhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEec
Q 005236          390 SINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISE----QGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .+...|++|+||+||.+.. .+.+++.+.+.....    .....+.+|+.++++|+ |+++++++++    +..+++|||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey   79 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY   79 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence            3558999999999997766 677788777754332    11235789999999995 5889999886    456999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEeccc-CCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDL-KASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Di-kp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      +.|.+|...+..          ....++.|++.+|.++|.++   |+|||| ||.|||++.++.++|+|||++.......
T Consensus        80 I~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~  146 (218)
T PRK12274         80 LAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA  146 (218)
T ss_pred             ecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence            999998754311          11347789999999999998   999999 7999999999999999999998654322


Q ss_pred             Cc----cc-------ccccccccCccCccccccC-CCC-cchhhHHHHHHHHHHHhCCCCC
Q 005236          544 TE----GN-------TNRVVGTYGYMAPEYASDG-QFS-VKSDVFSFGILLLEIVSGKKNR  591 (706)
Q Consensus       544 ~~----~~-------~~~~~gt~~y~aPE~~~~~-~~s-~~sDv~SlGvil~elltG~~p~  591 (706)
                      ..    ..       ......++.|++|+...-. ..+ ...+.++.|.-+|.++|++.+.
T Consensus       147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~  207 (218)
T PRK12274        147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH  207 (218)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence            10    00       1112357788888765332 333 5779999999999999999874

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.76  E-value=2.6e-19  Score=190.20  Aligned_cols=186  Identities=28%  Similarity=0.347  Sum_probs=153.3

Q ss_pred             eeccCCceeEEEEEe----CCCcEEEEEEcCccchhh--HHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEecCC
Q 005236          394 KLGEGGFGPVYKGTL----ADEQEIAVKRLSKISEQG--LKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       394 ~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      .+|+|.||.|+.++-    +.+..+|+|.+.+.....  ......|..++..++ ||.+|++.-.+..+...+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            379999999998653    346778888886532211  125567888888887 9999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +|.|...+....   ..+......+...++-+++++|+.+   |+|||+|++||+++.+|++++.|||+++..-....  
T Consensus        81 gg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~--  152 (612)
T KOG0603|consen   81 GGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI--  152 (612)
T ss_pred             cchhhhccccCC---chHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhh--
Confidence            999988774433   3455556667788999999999888   99999999999999999999999999987532211  


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~  593 (706)
                          .+||..|||||++.  .....+|.||||++++||+||..||..
T Consensus       153 ----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  153 ----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             ----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence                28999999999998  677899999999999999999999764

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.76  E-value=5.3e-18  Score=170.15  Aligned_cols=233  Identities=23%  Similarity=0.299  Sum_probs=147.9

Q ss_pred             CCCccceeccCCceeEEEEEeCC-CcEEEEEEcCc---cchhhHHHHHHHHHHHhhcCC-----------cceeeeEeE-
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH-----------RNLVKLLGC-  451 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h-----------~niv~l~~~-  451 (706)
                      .+...+.||.|+++.||.+++.+ ++++|||.+..   ......+++++|...+..+.+           .-++++--. 
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            45567899999999999999965 88999998743   233456778888766666433           112222111 


Q ss_pred             -------EEeCC--------eeEEEEecCCCCChhhhhh---cccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEe
Q 005236          452 -------CIHGE--------EKLLIYEFMPNKSLDSFIF---DQER-CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH  512 (706)
Q Consensus       452 -------~~~~~--------~~~lV~e~~~~gsL~~~l~---~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH  512 (706)
                             +....        ..+++|+-+ -++|.+++.   .... ...+....++.+..|+++.+++||+.+   ++|
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVH  168 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVH  168 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred             EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEe
Confidence                   11111        235677777 567777753   2211 122344555677789999999999998   999


Q ss_pred             cccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCcccccc--------CCCCcchhhHHHHHHHHHH
Q 005236          513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD--------GQFSVKSDVFSFGILLLEI  584 (706)
Q Consensus       513 ~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~~sDv~SlGvil~el  584 (706)
                      +||+|+|++++.+|.++|+||+.....+.....     ...+..|.+||....        -.++.+.|.|++|+++|.|
T Consensus       169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l  243 (288)
T PF14531_consen  169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL  243 (288)
T ss_dssp             ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred             cccceeeEEEcCCCCEEEcChHHHeecCceeec-----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence            999999999999999999999988764321111     234578999997744        2578899999999999999


Q ss_pred             HhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCC
Q 005236          585 VSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDR  650 (706)
Q Consensus       585 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  650 (706)
                      .+|+.|+...........                   .+. .+. .-...+..|+..+|+.+|++|
T Consensus       244 WC~~lPf~~~~~~~~~~~-------------------~f~-~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  244 WCGRLPFGLSSPEADPEW-------------------DFS-RCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHSS-STCCCGGGSTSGG-------------------GGT-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred             HHccCCCCCCCccccccc-------------------cch-hcC-CcCHHHHHHHHHHccCCcccC
Confidence            999999875433222111                   111 112 223345578889999999988

>PRK10345 hypothetical protein; Provisional

Probab=99.76  E-value=7.8e-18  Score=163.76  Aligned_cols=136  Identities=20%  Similarity=0.290  Sum_probs=105.6

Q ss_pred             CccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhc-----CCcceeeeEeEEEeCC---e-eEE
Q 005236          390 SINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKL-----QHRNLVKLLGCCIHGE---E-KLL  460 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~~l  460 (706)
                      .-.+.||+|+||.||.  .++....+||++........+.+.+|+.+++.+     .||||+++++++.+..   . ..+
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            3457999999999996  443333479988654444567899999999999     5799999999998864   3 337


Q ss_pred             EEec--CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHH-HHHHhCCCCceEecccCCCcEEEcC----CCCeEEeee
Q 005236          461 IYEF--MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL-LYLHQDSRLRIIHRDLKASNVLLDQ----DMNPKISDF  533 (706)
Q Consensus       461 V~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l-~~LH~~~~~~ivH~Dikp~Nill~~----~~~~kl~Df  533 (706)
                      |+||  +.+++|.+++.+.    .+++.  ..++.+++.++ +|||+++   |+||||||+|||++.    +..++|+||
T Consensus        83 I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             EecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence            8999  5589999999542    24444  35677888777 9999998   999999999999974    347999994


Q ss_pred             ccc
Q 005236          534 GLA  536 (706)
Q Consensus       534 gla  536 (706)
                      +-+
T Consensus       154 ~G~  156 (210)
T PRK10345        154 IGE  156 (210)
T ss_pred             CCC
Confidence            444

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=1.2e-18  Score=198.05  Aligned_cols=197  Identities=22%  Similarity=0.291  Sum_probs=157.3

Q ss_pred             hccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC---CcceeeeEeEEEeCCeeEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ---HRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV  461 (706)
                      ..+.|.|.+.||+|+||+||+|...+|+.||+|.-+..+.=   +|---.+++.+|+   -+-|+.+..+..-.+..+||
T Consensus       696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv  772 (974)
T KOG1166|consen  696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV  772 (974)
T ss_pred             cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence            44678999999999999999999988999999987543211   1111122333333   23455666666667888999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-------CCCeEEeeec
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-------DMNPKISDFG  534 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-------~~~~kl~Dfg  534 (706)
                      +||.+-|+|.+++.   ..+.++|.....++.|+++.++.||..+   |||+||||+|+||..       ...++|+|||
T Consensus       773 ~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG  846 (974)
T KOG1166|consen  773 SEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLIDFG  846 (974)
T ss_pred             eeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEecc
Confidence            99999999999996   4466899999999999999999999998   999999999999952       3458999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKN  590 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p  590 (706)
                      .+.....-.........++|-.+--+|...+.+++.++|.|.++.+++-||.|+..
T Consensus       847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             cceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            98765433333344556789999999999999999999999999999999999864

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.72  E-value=5.8e-17  Score=160.08  Aligned_cols=134  Identities=20%  Similarity=0.261  Sum_probs=113.1

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccch--------hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISE--------QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +.||+|++|.||+|.. .+..+++|+......        .....+.+|+.++..++|++|.....++......++||||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            6799999999999988 667899997643211        1124578899999999999988877777777888999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++|++|.+++....      . .+..++.+++.+|.+||+.+   ++|+|++|.|||++ ++.++|+|||++..
T Consensus        81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            99999999885321      2 77889999999999999988   99999999999999 78999999999875

>smart00090 RIO RIO-like kinase

Probab=99.71  E-value=6.2e-17  Score=161.52  Aligned_cols=150  Identities=17%  Similarity=0.167  Sum_probs=114.5

Q ss_pred             HHHHHhccCCCccceeccCCceeEEEEE--eCCCcEEEEEEcCccchh------------------------hHHHHHHH
Q 005236          380 ATIANATDNFSINKKLGEGGFGPVYKGT--LADEQEIAVKRLSKISEQ------------------------GLKELKNE  433 (706)
Q Consensus       380 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E  433 (706)
                      ..+......|.+.+.||+|+||.||+|.  ..+|+.||||++......                        ....+..|
T Consensus        21 ~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E  100 (237)
T smart00090       21 YSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKE  100 (237)
T ss_pred             HHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHH
Confidence            3444444568899999999999999998  567999999988642210                        11235789


Q ss_pred             HHHHhhcCCcc--eeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 005236          434 IILFSKLQHRN--LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRII  511 (706)
Q Consensus       434 ~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iv  511 (706)
                      +..+.++.+..  +.++++.    ...++||||+++.+|...+...   ..+.......++.||+.++.+||+.+  .++
T Consensus       101 ~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~g--~ii  171 (237)
T smart00090      101 FRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKEG--ELV  171 (237)
T ss_pred             HHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhcC--CEE
Confidence            99999997633  3444433    2358999999999987665222   23455567789999999999999876  399


Q ss_pred             ecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          512 HRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       512 H~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      ||||||+||+++ ++.++|+|||.+...
T Consensus       172 H~Dikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      172 HGDLSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             eCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence            999999999999 889999999998764

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.70  E-value=4.3e-18  Score=177.66  Aligned_cols=243  Identities=21%  Similarity=0.255  Sum_probs=158.4

Q ss_pred             CCccceeccCCceeEEEEEeCCC----cEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeE------eEEEe---
Q 005236          389 FSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLL------GCCIH---  454 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~------~~~~~---  454 (706)
                      ..+.+..+..+++.+...+..++    ..++.+..............+++-.+... +|++.+..-      .....   
T Consensus       246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v  325 (516)
T KOG1033|consen  246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKV  325 (516)
T ss_pred             ccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccc
Confidence            34446667777777766654332    22333333222212222233333333333 444433221      01111   


Q ss_pred             --CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          455 --GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       455 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                        ...+++.|+++...+|.+||.+.......++...+.++.|++.++.|   ++   .+|+|+||.||+...+..+||.|
T Consensus       326 ~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgD  399 (516)
T KOG1033|consen  326 GKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGD  399 (516)
T ss_pred             ccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhh
Confidence              22468999999999999999877777778899999999999999999   55   99999999999999999999999


Q ss_pred             eccccccCCCC----CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhC-CCCCCCCCCCCchhHHHHHH
Q 005236          533 FGLARAFGGDE----TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG-KKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       533 fgla~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG-~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+........    ........+||..||+||.+.+..|+.|+||||||+||+|++.- ..+++          -....
T Consensus       400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----------r~~t~  469 (516)
T KOG1033|consen  400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----------RIATL  469 (516)
T ss_pred             hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----------HHHhh
Confidence            99987654433    22234557899999999999999999999999999999999982 22211          01111


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHH
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSV  656 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev  656 (706)
                      .-++.+.++    +......+.     -..+..+++...|.+||++.++
T Consensus       470 ~d~r~g~ip----~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  470 TDIRDGIIP----PEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             hhhhcCCCC----hHHhhcCcH-----HHHHHHHhcCCCcccCchHHHH
Confidence            112222222    111111111     2357779999999999955444

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.70  E-value=1.5e-16  Score=155.23  Aligned_cols=144  Identities=17%  Similarity=0.161  Sum_probs=112.0

Q ss_pred             HHHHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccch----------------------hhHHHHHHHHHHHh
Q 005236          381 TIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISE----------------------QGLKELKNEIILFS  438 (706)
Q Consensus       381 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~  438 (706)
                      ++......|.+.+.||+|+||.||++...+|+.||||++.....                      .....+..|+.++.
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   88 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK   88 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence            34444445888899999999999999998899999998643210                      01123677889999


Q ss_pred             hcCCcc--eeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccC
Q 005236          439 KLQHRN--LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLK  516 (706)
Q Consensus       439 ~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik  516 (706)
                      .+.|++  +++.++    ....++||||+++++|......         .....++.+++.++.++|+.+   ++|+|||
T Consensus        89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~  152 (198)
T cd05144          89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG---IIHGDLS  152 (198)
T ss_pred             HHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC---CCcCCCC
Confidence            998874  444443    2455899999999999765421         234578899999999999987   9999999


Q ss_pred             CCcEEEcCCCCeEEeeeccccccC
Q 005236          517 ASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       517 p~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |+||++++++.++|+|||++..+.
T Consensus       153 p~Nill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         153 EFNILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             cccEEEcCCCcEEEEECCccccCC
Confidence            999999999999999999997653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.69  E-value=1.5e-16  Score=155.63  Aligned_cols=130  Identities=22%  Similarity=0.327  Sum_probs=107.1

Q ss_pred             eeccCCceeEEEEEeCCCcEEEEEEcCccc--------hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          394 KLGEGGFGPVYKGTLADEQEIAVKRLSKIS--------EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       394 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .||+|+||.||+|.. ++..+++|......        .....++.+|+.++..++|+++.....++...+..++||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            489999999999995 56789999854321        112356788999999999987766565666777789999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      +|++|.+++.....          .++.+++.+|.+||+.+   ++|+|++|.||+++ ++.++++|||+++.
T Consensus        80 ~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        80 EGKPLKDVIEEGND----------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CCccHHHHHhhcHH----------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            99999988743211          68999999999999988   99999999999999 89999999999875

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.68  E-value=2.1e-16  Score=177.70  Aligned_cols=137  Identities=20%  Similarity=0.295  Sum_probs=112.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEE-cCcc-------chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKR-LSKI-------SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  457 (706)
                      ...|...+.||+|+||.||+|.+.+.. +++|+ +.+.       .....+.+.+|+.++..++|++++....++.....
T Consensus       332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~  410 (535)
T PRK09605        332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE  410 (535)
T ss_pred             ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence            345566799999999999999885544 33333 2221       11223568899999999999999988888877778


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+++++|.+++.           ....++.+++++|.+||+.+   ++||||||+|||+ +++.++|+|||+++
T Consensus       411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~  475 (535)
T PRK09605        411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGK  475 (535)
T ss_pred             CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcccc
Confidence            899999999999999884           34678999999999999988   9999999999999 67899999999997


Q ss_pred             c
Q 005236          538 A  538 (706)
Q Consensus       538 ~  538 (706)
                      .
T Consensus       476 ~  476 (535)
T PRK09605        476 Y  476 (535)
T ss_pred             c
Confidence            6

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.65  E-value=8.6e-17  Score=125.20  Aligned_cols=66  Identities=45%  Similarity=1.013  Sum_probs=59.2

Q ss_pred             ccCCCceEEeeccCCCCCCccccccccCHhHHHHHHhhcCccccccccccCCCCceeeeeecccccc
Q 005236          221 YSREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDM  287 (706)
Q Consensus       221 c~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~~CsC~a~~~~~~~~~~~~c~~~~~~l~d~  287 (706)
                      |+.+|+|+++++|++|++....+..++++++|++.||+||||+||+|.+.+ ++++|.+|+++|+|+
T Consensus         1 C~~~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~-~~~~C~lW~~~L~d~   66 (66)
T PF08276_consen    1 CGSGDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLS-GGGGCLLWYGDLVDL   66 (66)
T ss_pred             CcCCCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccC-CCCEEEEEcCEeecC
Confidence            455799999999999999877776789999999999999999999998766 678999999999984

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=1e-15  Score=153.34  Aligned_cols=197  Identities=21%  Similarity=0.272  Sum_probs=132.5

Q ss_pred             CCcceeeeEeEEEeC---------------------------CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHH
Q 005236          441 QHRNLVKLLGCCIHG---------------------------EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC  493 (706)
Q Consensus       441 ~h~niv~l~~~~~~~---------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~  493 (706)
                      +|||||++.++|.+.                           ..+|+||.-. ..+|.+++..+.    .+.....-++.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~----~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH----RSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC----CchHHHHHHHH
Confidence            599999999887641                           2457888766 458888885433    45556667889


Q ss_pred             HHHHHHHHHHhCCCCceEecccCCCcEEEc--CCC--CeEEeeeccccccCCCC----CcccccccccccCccCcccccc
Q 005236          494 GTARGLLYLHQDSRLRIIHRDLKASNVLLD--QDM--NPKISDFGLARAFGGDE----TEGNTNRVVGTYGYMAPEYASD  565 (706)
Q Consensus       494 ~ia~~l~~LH~~~~~~ivH~Dikp~Nill~--~~~--~~kl~Dfgla~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~  565 (706)
                      |+++|+.|||.++   |.|||+|++||||.  +|+  .+.|+|||.+---....    .....-..-|.-.-||||+...
T Consensus       349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta  425 (598)
T KOG4158|consen  349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA  425 (598)
T ss_pred             HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence            9999999999998   99999999999993  444  47899999875422110    1111112346778999999865


Q ss_pred             CCC------CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHH
Q 005236          566 GQF------SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIG  639 (706)
Q Consensus       566 ~~~------s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~  639 (706)
                      .+-      -.|+|.|+.|.+.||+++...||-. ..+..++...     +.+...+.+.+     ..+.    .+.+++
T Consensus       426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~-rGem~L~~r~-----Yqe~qLPalp~-----~vpp----~~rqlV  490 (598)
T KOG4158|consen  426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK-RGEMLLDTRT-----YQESQLPALPS-----RVPP----VARQLV  490 (598)
T ss_pred             CCCCceeeccchhhhhhhhhhHHHHhccCCcccc-cchheechhh-----hhhhhCCCCcc-----cCCh----HHHHHH
Confidence            431      2589999999999999999999743 1111111111     12222222222     1111    244688


Q ss_pred             HHhcCCCCCCCCChhHHHHHh
Q 005236          640 LLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       640 ~~cl~~~p~~RPt~~ev~~~L  660 (706)
                      ...|+.||.+||+..=..-.|
T Consensus       491 ~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  491 FDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HHHhcCCccccCCccHHHhHH
Confidence            889999999999876555554

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.64  E-value=5.7e-17  Score=141.39  Aligned_cols=62  Identities=52%  Similarity=0.816  Sum_probs=50.2

Q ss_pred             CceEEEEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCcccceeecCCceEEEecCCCCCCC
Q 005236            3 ALSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPS   68 (706)
Q Consensus         3 ~~~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps   68 (706)
                      .+..|+|+|+|||||++..+    .+|||||||||||+||+|+|+.+..++.+..++||++.+|||
T Consensus        53 ~~~~~~L~~~GNlvl~d~~~----~~lW~Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   53 SGCYLVLQDDGNLVLYDSSG----NVLWQSFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             SSEEEEEETTSEEEEEETTS----EEEEESTTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             cCeEEEEeCCCCEEEEeecc----eEEEeecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            47789999999999998644    899999999999999999999988888777899999999997

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.63  E-value=2.7e-16  Score=175.27  Aligned_cols=214  Identities=23%  Similarity=0.273  Sum_probs=141.3

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .+|..++.|..|+||.||.++++. .+..|+| +.+..--    +++   ++.....|.+|                   
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li----lRn---ilt~a~npfvv-------------------  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI----LRN---ILTFAGNPFVV-------------------  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhhc-ccccchh----hhc---cccccCCccee-------------------
Confidence            688899999999999999999865 5567773 3221110    011   22222333333                   


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                        |+-...+..   .+.++.        +++.+++|||+.+   |+|||+||.|.+|+.-|++|+.|||+++........
T Consensus       136 --gDc~tllk~---~g~lPv--------dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at  199 (1205)
T KOG0606|consen  136 --GDCATLLKN---IGPLPV--------DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT  199 (1205)
T ss_pred             --chhhhhccc---CCCCcc--------hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence              333333321   122332        2378999999888   999999999999999999999999999864211000


Q ss_pred             -------------ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc
Q 005236          546 -------------GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE  612 (706)
Q Consensus       546 -------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~  612 (706)
                                   ......+||+.|+|||++....|...+|.|++|+|+||.+-|..||....+++....+..-...|.+
T Consensus       200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE  279 (1205)
T KOG0606|consen  200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE  279 (1205)
T ss_pred             hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc
Confidence                         0122458999999999999999999999999999999999999998654433322221111111111


Q ss_pred             CCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       613 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                      +              +..-..++.+++.+.|+.+|..|--....+
T Consensus       280 ~--------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~  310 (1205)
T KOG0606|consen  280 E--------------DEALPPEAQDLIEQLLRQNPLCRLGTGGAL  310 (1205)
T ss_pred             c--------------CcCCCHHHHHHHHHHHHhChHhhcccchhh
Confidence            1              111122455677889999999996444333

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.61  E-value=6.9e-15  Score=136.57  Aligned_cols=135  Identities=23%  Similarity=0.204  Sum_probs=114.8

Q ss_pred             ccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCC--cceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          391 INKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH--RNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       391 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      +.+.||+|.++.||++...+ ..+++|.......  ...+..|+..+..++|  .++++++.+....+..+++|||++++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            45789999999999999855 7899998865433  4678899999999976  58999998888778899999999998


Q ss_pred             ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          469 SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       469 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      .+..+          +......++.+++++|++||......++|+|++|.||++++.+.++++|||.+..
T Consensus        79 ~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          79 TLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             ecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            77653          4456677899999999999986545699999999999999999999999999875

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.59  E-value=7.1e-15  Score=142.19  Aligned_cols=136  Identities=21%  Similarity=0.221  Sum_probs=97.8

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCccchh--hHHH----------------------HHHHHHHHhhcCCcc--e
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQ--GLKE----------------------LKNEIILFSKLQHRN--L  445 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~n--i  445 (706)
                      .+.||+|+||.||+|...+++.||||++......  ....                      ...|...+.++.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999888999999987542211  1111                      135666666665443  4


Q ss_pred             eeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecccCCCcEEEcC
Q 005236          446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ-DSRLRIIHRDLKASNVLLDQ  524 (706)
Q Consensus       446 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dikp~Nill~~  524 (706)
                      .+.+++    ...++||||++++++.........   .. .....++.+++.++.++|. .+   |+|+||||+||+++ 
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-  149 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-  149 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence            444433    346899999999654321111100   11 5567899999999999998 76   99999999999999 


Q ss_pred             CCCeEEeeecccccc
Q 005236          525 DMNPKISDFGLARAF  539 (706)
Q Consensus       525 ~~~~kl~Dfgla~~~  539 (706)
                      ++.++|+|||.+...
T Consensus       150 ~~~~~liDfg~a~~~  164 (187)
T cd05119         150 DGKVYIIDVPQAVEI  164 (187)
T ss_pred             CCcEEEEECcccccc
Confidence            999999999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.56  E-value=3.2e-14  Score=142.32  Aligned_cols=134  Identities=16%  Similarity=0.197  Sum_probs=104.5

Q ss_pred             ceec-cCCceeEEEEEeCCCcEEEEEEcCccc-------------hhhHHHHHHHHHHHhhcCCcce--eeeEeEEEeCC
Q 005236          393 KKLG-EGGFGPVYKGTLADEQEIAVKRLSKIS-------------EQGLKELKNEIILFSKLQHRNL--VKLLGCCIHGE  456 (706)
Q Consensus       393 ~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~~  456 (706)
                      ..|| .|+.|+||++... +..++||++....             ......+.+|+.++.+++|++|  ++.+++.....
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            5687 8999999999885 6788998774311             1223567889999999998885  67777654432


Q ss_pred             e----eEEEEecCCC-CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEe
Q 005236          457 E----KLLIYEFMPN-KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS  531 (706)
Q Consensus       457 ~----~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~  531 (706)
                      .    .++|||++++ .+|.+++...    .++..    .+.+|+.+|.+||+.+   |+||||||.|||++.++.++|+
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI  184 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI  184 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence            2    2599999997 6998887432    23332    3578999999999998   9999999999999999999999


Q ss_pred             eeccccc
Q 005236          532 DFGLARA  538 (706)
Q Consensus       532 Dfgla~~  538 (706)
                      |||.+..
T Consensus       185 Dfg~~~~  191 (239)
T PRK01723        185 DFDRGEL  191 (239)
T ss_pred             ECCCccc
Confidence            9999876

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.54  E-value=7.8e-16  Score=172.28  Aligned_cols=256  Identities=25%  Similarity=0.326  Sum_probs=187.9

Q ss_pred             cCCCccceeccCCceeEEEEEeCC--CcEEEEEEcCccc--hhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD--EQEIAVKRLSKIS--EQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV  461 (706)
                      ..|.+.+.||+|+|+.|-......  ...+|+|.+....  ....+.+..|..+-..+. |+|++++++...+.+..+++
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            467788889999999998887643  4456777665432  334455666877777776 99999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHH-hCCCCceEecccCCCcEEEcCCC-CeEEeeecccccc
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH-QDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAF  539 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfgla~~~  539 (706)
                      .+|..++++.+.+... .....+....-.++.|+..++.|+| ..+   +.||||||+|.+++..+ .++++|||+|..+
T Consensus       100 ~~~s~g~~~f~~i~~~-~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHP-DSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             cCcccccccccccccC-CccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence            9999999999888421 1113445566778999999999999 776   99999999999999999 9999999999987


Q ss_pred             CC-CCCccccccccc-ccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          540 GG-DETEGNTNRVVG-TYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       540 ~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      .. +.........+| ++.|+|||...+. -.....|+||.|+++.-+++|..|+.......... ..+...   .....
T Consensus       176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-~~~~~~---~~~~~  251 (601)
T KOG0590|consen  176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-SSWKSN---KGRFT  251 (601)
T ss_pred             cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-eeeccc---ccccc
Confidence            66 555555556778 9999999999885 44678999999999999999999987654433110 000000   00000


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..   .+ ....    ....++...++..+|..|.+.+++..
T Consensus       252 ~~---~~-~~~~----~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  252 QL---PW-NSIS----DQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             cC---cc-ccCC----hhhhhcccccccCCchhccccccccc
Confidence            00   00 0011    12345666788899999999888753

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.45  E-value=5.7e-13  Score=144.91  Aligned_cols=140  Identities=26%  Similarity=0.287  Sum_probs=99.2

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhhH------------------------------H----------HHHH
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGL------------------------------K----------ELKN  432 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------------------------------~----------~~~~  432 (706)
                      +.||.|++|+||+|++++|+.||||+.+.......                              +          .+.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            67999999999999999999999999865321110                              0          1334


Q ss_pred             HHHHHhhcC----CcceeeeEeEEE-eCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHH-HHHHHHhCC
Q 005236          433 EIILFSKLQ----HRNLVKLLGCCI-HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR-GLLYLHQDS  506 (706)
Q Consensus       433 E~~~l~~l~----h~niv~l~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~-~l~~LH~~~  506 (706)
                      |+..+.++.    |.+-+.+-.++. .....+|||||++|++|.++......  ..   .+..++..++. .+..+|..+
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhCC
Confidence            555554442    322223222222 23467999999999999987643211  11   23456666666 478889887


Q ss_pred             CCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       507 ~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                         ++|+|+||.||++++++.++++|||++..+.
T Consensus       278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             ---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence               9999999999999999999999999998753

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=99.43  E-value=1.4e-13  Score=110.51  Aligned_cols=72  Identities=19%  Similarity=0.270  Sum_probs=62.9

Q ss_pred             ccCCCceEEeeccCCCCCCccccccccCHhHHHHHHhh---cCccccccccccCCCCceeeeeeccc-ccccccCCCCcc
Q 005236          221 YSREDGFIKFTAMKLPDATPSWVSKSMNLKECREKCLE---NSSCMAYTNSDIRGGGSGCAMWFGEL-IDMRDFPDGGQD  296 (706)
Q Consensus       221 c~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~---~CsC~a~~~~~~~~~~~~c~~~~~~l-~d~~~~~~~~~d  296 (706)
                      |.....|+++.+|++|++..      +++++|++.|++   ||||+||+|.+.   +.||.+|.+++ +|.+++...+.|
T Consensus         5 ~~~~g~fl~~~~~klpd~~~------~s~~eC~~~Cl~~~~nCsC~Aya~~~~---~~gC~~W~~~l~~d~~~~~~~g~~   75 (80)
T cd00129           5 CKSAGTTLIKIALKIKTTKA------NTADECANRCEKNGLPFSCKAFVFAKA---RKQCLWFPFNSMSGVRKEFSHGFD   75 (80)
T ss_pred             eecCCeEEEeecccCCcccc------cCHHHHHHHHhcCCCCCCceeeeccCC---CCCeEEecCcchhhHHhccCCCce
Confidence            34457899999999999864      789999999999   999999999753   35899999999 999999888999


Q ss_pred             EEEEe
Q 005236          297 LYIRM  301 (706)
Q Consensus       297 lylr~  301 (706)
                      +|+|.
T Consensus        76 Ly~r~   80 (80)
T cd00129          76 LYENK   80 (80)
T ss_pred             eEeEC
Confidence            99983

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.42  E-value=2.7e-13  Score=133.18  Aligned_cols=203  Identities=20%  Similarity=0.207  Sum_probs=139.1

Q ss_pred             HHHhhcCCcceeeeEeEEEeC-----CeeEEEEecCCCCChhhhhhcccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 005236          435 ILFSKLQHRNLVKLLGCCIHG-----EEKLLIYEFMPNKSLDSFIFDQER-CKLLDWSKRFHIICGTARGLLYLHQDSRL  508 (706)
Q Consensus       435 ~~l~~l~h~niv~l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~  508 (706)
                      .-+-.+.|.|||+++.|+.+.     ....++.|||..|+|..+|++..+ .+.+......+|..||..||.|||+.. +
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~-P  197 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD-P  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-C
Confidence            345566799999999987643     356899999999999999976433 345777777889999999999999975 6


Q ss_pred             ceEecccCCCcEEEcCCCCeEEeeeccccccC--CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh
Q 005236          509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFG--GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS  586 (706)
Q Consensus       509 ~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~--~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt  586 (706)
                      +|+|+++.-+.|++..+|-+||.--.-.....  ............+-++|.|||+=...+.+..+|||+||+..+||.-
T Consensus       198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai  277 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI  277 (458)
T ss_pred             ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence            79999999999999999988885311111000  0000112223456789999999888888999999999999999988


Q ss_pred             CCCCCCC-CCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          587 GKKNRGF-YHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       587 G~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      |..-... .........+........        +++-            ..++..|++..|..||+|.+++.
T Consensus       278 lEiq~tnseS~~~~ee~ia~~i~~le--------n~lq------------r~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  278 LEIQSTNSESKVEVEENIANVIIGLE--------NGLQ------------RGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             heeccCCCcceeehhhhhhhheeecc--------Cccc------------cCcCcccccCCCCCCcchhhhhc
Confidence            7653211 111111111111111111        1111            12444799999999999998864

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.36  E-value=1.2e-12  Score=108.38  Aligned_cols=80  Identities=43%  Similarity=0.944  Sum_probs=66.2

Q ss_pred             CccccCC---CceEEeeccCCCCCCccccccccCHhHHHHHHhhcCccccccccccCCCCceeeeeecccccccccCCCC
Q 005236          218 SLNYSRE---DGFIKFTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFGELIDMRDFPDGG  294 (706)
Q Consensus       218 ~~~c~~~---~~f~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~~CsC~a~~~~~~~~~~~~c~~~~~~l~d~~~~~~~~  294 (706)
                      +++|...   ++|++++++++|++....  .++++++|++.||+||+|+||+|.+   ++++|.+|.+.+.+++.....+
T Consensus         2 ~~~C~~~~~~~~f~~~~~~~~~~~~~~~--~~~s~~~C~~~Cl~nCsC~a~~~~~---~~~~C~~~~~~~~~~~~~~~~~   76 (84)
T cd01098           2 PLNCGGDGSTDGFLKLPDVKLPDNASAI--TAISLEECREACLSNCSCTAYAYNN---GSGGCLLWNGLLNNLRSLSSGG   76 (84)
T ss_pred             CcccCCCCCCCEEEEeCCeeCCCchhhh--ccCCHHHHHHHHhcCCCcceeeecC---CCCeEEEEeceecceEeecCCC
Confidence            3456543   789999999999987653  7889999999999999999999975   3578999999999987755556


Q ss_pred             ccEEEEec
Q 005236          295 QDLYIRMS  302 (706)
Q Consensus       295 ~dlylr~s  302 (706)
                      .++|||++
T Consensus        77 ~~~yiKv~   84 (84)
T cd01098          77 GTLYLRLA   84 (84)
T ss_pred             cEEEEEeC
Confidence            88999874

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.32  E-value=8.9e-12  Score=118.37  Aligned_cols=130  Identities=25%  Similarity=0.172  Sum_probs=97.5

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCccee-eeEeEEEeCCeeEEEEecCCCCChh
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV-KLLGCCIHGEEKLLIYEFMPNKSLD  471 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lV~e~~~~gsL~  471 (706)
                      +.|+.|.++.||+++.. ++.+++|....... ....+..|+..+..+.+.+++ +++..  .....++||||+++.++.
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l~   79 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSELL   79 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCccc
Confidence            67899999999999875 77899998754322 123467899999988765554 44443  234468999999999886


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          472 SFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS--RLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       472 ~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ...        .   ....++.+++++|+.||..+  ...++|+|++|.||+++ ++.++++|||.+..
T Consensus        80 ~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          80 TED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             ccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            430        0   11235678999999999876  23469999999999999 67899999998864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.30  E-value=3.7e-12  Score=139.97  Aligned_cols=147  Identities=20%  Similarity=0.204  Sum_probs=92.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhh----------------------------------HHHH
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQG----------------------------------LKEL  430 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~~~~  430 (706)
                      ...|.. +.||.|++|+||+|++++ |+.||||+++....+.                                  .+.+
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            456776 789999999999999987 9999999986532110                                  1112


Q ss_pred             ------HHHHHHHhhcC----CcceeeeEeEEEe-CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHH-HH
Q 005236          431 ------KNEIILFSKLQ----HRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA-RG  498 (706)
Q Consensus       431 ------~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia-~~  498 (706)
                            .+|+..+.+++    +.+.+.+-.++.+ ....+|||||++|+.+.++-.-..  ...+..   .++...+ .-
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~--~g~d~~---~la~~~v~~~  272 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA--AGTDMK---LLAERGVEVF  272 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh--cCCCHH---HHHHHHHHHH
Confidence                  23333333332    3333333333322 346789999999999987431111  111111   1222111 12


Q ss_pred             HHHHHhCCCCceEecccCCCcEEEcCCC----CeEEeeeccccccCC
Q 005236          499 LLYLHQDSRLRIIHRDLKASNVLLDQDM----NPKISDFGLARAFGG  541 (706)
Q Consensus       499 l~~LH~~~~~~ivH~Dikp~Nill~~~~----~~kl~Dfgla~~~~~  541 (706)
                      +..++..+   ++|+|+||.||+++.++    .++++|||++..+..
T Consensus       273 ~~Qif~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        273 FTQVFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HHHHHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            23344455   99999999999999988    999999999987643

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.24  E-value=8.3e-12  Score=133.61  Aligned_cols=248  Identities=22%  Similarity=0.308  Sum_probs=175.3

Q ss_pred             CCCccceecc--CCceeEEEEEe---CCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeE
Q 005236          388 NFSINKKLGE--GGFGPVYKGTL---ADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       388 ~~~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  459 (706)
                      .+-+.+.+|.  |.+|.||.+..   .++..+|+|+-+.  ..+.....=.+|+....+++ |+|.++.+..+..++..+
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            4556688999  99999999987   3477889998433  22233334456666666674 999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHH----HHHHHHhCCCCceEecccCCCcEEEcCC-CCeEEeeec
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR----GLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFG  534 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~----~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~Dfg  534 (706)
                      +-.|++. .+|..+.+..  ...++...++....+...    ||.++|+.+   ++|-|+||.||++..+ ..++++|||
T Consensus       195 iqtE~~~-~sl~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~  268 (524)
T KOG0601|consen  195 IQTELCG-ESLQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFG  268 (524)
T ss_pred             eeecccc-chhHHhhhcc--cccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcc
Confidence            9999885 7777776443  234566667777777777    999999987   9999999999999999 899999999


Q ss_pred             cccccCCCCCcc---cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh
Q 005236          535 LARAFGGDETEG---NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       535 la~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      +...++......   ......|...|++||.. ...++..+|+|++|.+..+-.+|......-...        .|...+
T Consensus       269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~--------~W~~~r  339 (524)
T KOG0601|consen  269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNS--------SWSQLR  339 (524)
T ss_pred             eeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCC--------Cccccc
Confidence            999886544222   11223577899999987 567788999999999999999987664321000        011111


Q ss_pred             cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          612 EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       612 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ...   +-+....+ .    ..++..++.++++.+|..|++.+.+..
T Consensus       340 ~~~---ip~e~~~~-~----s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  340 QGY---IPLEFCEG-G----SSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             ccc---CchhhhcC-c----chhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            111   11111110 0    112223677899999999999877653

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.14  E-value=1e-09  Score=118.71  Aligned_cols=166  Identities=16%  Similarity=0.232  Sum_probs=124.7

Q ss_pred             CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHH
Q 005236          409 ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR  488 (706)
Q Consensus       409 ~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~  488 (706)
                      .++.+|.|+.....+....+..++-+..++.++||||++++.........|+|+|-+.  .|..++.+      +.....
T Consensus        35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~~v  106 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKEEV  106 (690)
T ss_pred             ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHHHH
Confidence            4577888888766555445567788889999999999999999999999999999874  45555533      224555


Q ss_pred             HHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCC
Q 005236          489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF  568 (706)
Q Consensus       489 ~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  568 (706)
                      ..-+.||+.||.+||+.+  .++|++|.-..|+|++.|+-||++|.++........  .......-..|..|+.+.... 
T Consensus       107 ~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~-  181 (690)
T KOG1243|consen  107 CLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE-  181 (690)
T ss_pred             HHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc-
Confidence            667899999999999765  599999999999999999999999998865321111  111112233566666553222 


Q ss_pred             CcchhhHHHHHHHHHHHhCC
Q 005236          569 SVKSDVFSFGILLLEIVSGK  588 (706)
Q Consensus       569 s~~sDv~SlGvil~elltG~  588 (706)
                       -..|.|-||++++|++.|.
T Consensus       182 -~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  182 -WSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             -cchhhhhHHHHHHHHhCcc
Confidence             3569999999999999993

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.14  E-value=3.9e-10  Score=112.07  Aligned_cols=142  Identities=19%  Similarity=0.236  Sum_probs=109.2

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccch-hhHHHHHHHHHHHhhcCCc--ceeeeEeEEEeCC---eeEEEEecCC
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISE-QGLKELKNEIILFSKLQHR--NLVKLLGCCIHGE---EKLLIYEFMP  466 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~---~~~lV~e~~~  466 (706)
                      +.|+.|..+.||+++..+|+.+++|....... .....+..|+.++..+.+.  ++.+++.+.....   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            67899999999999987778999998754322 2356788999999999763  4566777765532   5689999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS----------------------------------------  506 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------  506 (706)
                      +.++.+.+..    ..++...+..++.++++.|.+||+..                                        
T Consensus        84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            9998876521    23566667777888888888887421                                        


Q ss_pred             -------------CCceEecccCCCcEEEcC--CCCeEEeeeccccc
Q 005236          507 -------------RLRIIHRDLKASNVLLDQ--DMNPKISDFGLARA  538 (706)
Q Consensus       507 -------------~~~ivH~Dikp~Nill~~--~~~~kl~Dfgla~~  538 (706)
                                   ...++|+|++|.||+++.  ++.+.|+||+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                         246899999999999998  66789999998864

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=7.2e-10  Score=101.98  Aligned_cols=131  Identities=19%  Similarity=0.278  Sum_probs=101.9

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEE-cCcc--ch-----hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKR-LSKI--SE-----QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~--~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ..+++|+-+.+|.+.+.+. .+++|. +++.  .+     -..+.-.+|+.++.+++--.|..-+-+..+.+...++|||
T Consensus         2 ~~i~~GAEa~i~~~~~~g~-~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGL-PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeeccCc-ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            4678999999999977443 466664 3331  11     1234567899999999766666555666788888999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++|..|.+.+...          ...++..+-.-+.-||..+   |+|+||+++||++..+. +.++||||+..
T Consensus        81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence            9999999888543          2456778888899999998   99999999999998776 99999999975

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.08  E-value=1.9e-09  Score=103.07  Aligned_cols=135  Identities=15%  Similarity=0.139  Sum_probs=97.1

Q ss_pred             ceeccCCceeEEEEEeCC-------CcEEEEEEcCcc-------------c---------hhhHHHH----HHHHHHHhh
Q 005236          393 KKLGEGGFGPVYKGTLAD-------EQEIAVKRLSKI-------------S---------EQGLKEL----KNEIILFSK  439 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~-------------~---------~~~~~~~----~~E~~~l~~  439 (706)
                      -.||.|--+.||.|...+       +..+|||+.+..             .         ....+.+    ++|+..|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            578999999999998653       478999976320             0         0012233    389999999


Q ss_pred             cCC--cceeeeEeEEEeCCeeEEEEecCCCCChhh-hhhcccccCCCCHHHHHHHHHHHHHHHHHH-HhCCCCceEeccc
Q 005236          440 LQH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDS-FIFDQERCKLLDWSKRFHIICGTARGLLYL-HQDSRLRIIHRDL  515 (706)
Q Consensus       440 l~h--~niv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~ia~~l~~L-H~~~~~~ivH~Di  515 (706)
                      +..  -++.+.+++    ...++||||+.+..+.. .+.+    ..++......+..+++.+|..| |..+   ++|+||
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDL  151 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADL  151 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence            864  355666654    56789999998764432 2211    1234455667788999999999 7777   999999


Q ss_pred             CCCcEEEcCCCCeEEeeecccccc
Q 005236          516 KASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       516 kp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      ++.|||++ ++.+.|+|||.+...
T Consensus       152 s~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         152 SEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             CHHHEEEE-CCcEEEEECCCceeC
Confidence            99999997 468999999988754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.07  E-value=1.9e-09  Score=98.56  Aligned_cols=143  Identities=24%  Similarity=0.295  Sum_probs=106.8

Q ss_pred             ccceeccCCceeEEEEEeCCCcEEEEEE-cCcc-------chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          391 INKKLGEGGFGPVYKGTLADEQEIAVKR-LSKI-------SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       391 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ....|-+|+-+.|+++.+. |+..+||. +.+.       ..-..++.++|+..+.++.--.|.--.-++.+...-.++|
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            4578999999999999984 55556663 3331       1123456788999999987666655555677777888999


Q ss_pred             ecCCC-CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC---eEEeeeccccc
Q 005236          463 EFMPN-KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARA  538 (706)
Q Consensus       463 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~---~kl~Dfgla~~  538 (706)
                      ||+++ .++.+++...-.....+ .....++..|-+.+.-||...   |+|+||..+||+|..++.   +.++|||++..
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EeccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence            99987 57888886543322222 223678889999999999887   999999999999987654   58999999875

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.01  E-value=3.3e-10  Score=121.51  Aligned_cols=248  Identities=19%  Similarity=0.175  Sum_probs=172.5

Q ss_pred             HhccCCCccceeccCCceeEEEEEe--CCCcEEEEEEcCccchhhHHH--HHHHHHHHhhc-CCcceeeeEeEEEeCCee
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTL--ADEQEIAVKRLSKISEQGLKE--LKNEIILFSKL-QHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  458 (706)
                      ....+|..+..||.|.|+.|++...  .++..+++|.+.+.......+  -..|+.+...+ .|.++++.+..+..-+..
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~  341 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG  341 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence            3456788999999999999999765  357789999876543332222  23466666555 588999988888888888


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-CCeEEeeecccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLAR  537 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~Dfgla~  537 (706)
                      ++=-||++++++...+   .-...++...++++..|++.++.++|+..   ++|+|+||+||++..+ +..++.|||.+.
T Consensus       342 ~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             cCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhcccccccc
Confidence            8999999999988766   22344777888999999999999999876   9999999999999886 889999999986


Q ss_pred             ccCCCCCcccccccccccCcc--CccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          538 AFGGDETEGNTNRVVGTYGYM--APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      .+.....     .....-+++  +|+......+-.+.|++|||.-+.|.++|..-.+....          +..+..+..
T Consensus       416 ~~~~~~~-----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~----------~~~i~~~~~  480 (524)
T KOG0601|consen  416 RLAFSSG-----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ----------SLTIRSGDT  480 (524)
T ss_pred             ccceecc-----cccccccccccchhhccccccccccccccccccccccccCcccCccccc----------ceeeecccc
Confidence            4321111     112233444  55556667888999999999999999998764211000          000011111


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ..     ..+.  .   .....+..-++..++..||.+.++..+.+-
T Consensus       481 p~-----~~~~--~---~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  481 PN-----LPGL--K---LQLQVLLKVMINPDRKRRPSAVELSLHSEF  517 (524)
T ss_pred             cC-----CCch--H---HhhhhhhhhhcCCccccchhhhhhcccchh
Confidence            11     1110  1   122234456788999999999888776653

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.94  E-value=2.2e-08  Score=105.16  Aligned_cols=170  Identities=22%  Similarity=0.317  Sum_probs=130.7

Q ss_pred             CceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe----CCeeEEEEecCCC-CChhh
Q 005236          399 GFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH----GEEKLLIYEFMPN-KSLDS  472 (706)
Q Consensus       399 ~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~e~~~~-gsL~~  472 (706)
                      --.+.||+.. .+|..|++|+++....+.......-++.++++.|+|+|++..++..    ...+++||+|.++ ++|.+
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d  367 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD  367 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence            3457899986 5799999999965444444444556788999999999999998873    3467899999986 57877


Q ss_pred             hhhccc------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          473 FIFDQE------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       473 ~l~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      +-+...            .....++..+|.++.|+..||.++|+.|   +.-+-|.|.+||++.+.+++|+..|....+.
T Consensus       368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~  444 (655)
T KOG3741|consen  368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQ  444 (655)
T ss_pred             HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeec
Confidence            665322            1123667889999999999999999998   8889999999999999999999888877654


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCC
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKN  590 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p  590 (706)
                      .+...                -+   +--.+-|.=.||.+++-|.||...
T Consensus       445 ~d~~~----------------~l---e~~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  445 EDPTE----------------PL---ESQQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             CCCCc----------------ch---hHHhhhhHHHHHHHHHHHhhcccc
Confidence            43311                01   112467899999999999999654

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.87  E-value=3.6e-08  Score=99.83  Aligned_cols=141  Identities=18%  Similarity=0.116  Sum_probs=101.1

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchh-hHH----------HHHHHHHHHhhcCCcce--eeeEeEEEeC----
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQ-GLK----------ELKNEIILFSKLQHRNL--VKLLGCCIHG----  455 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~----------~~~~E~~~l~~l~h~ni--v~l~~~~~~~----  455 (706)
                      +.+-.-....|+++.+ +|+.+.||+....... ..+          .+.+|...+.++...+|  ++.+++....    
T Consensus        28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~  106 (268)
T PRK15123         28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA  106 (268)
T ss_pred             cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence            3444444445677766 6778999977443211 111          47789999988854443  4455565432    


Q ss_pred             -CeeEEEEecCCCC-ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-------CC
Q 005236          456 -EEKLLIYEFMPNK-SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-------DM  526 (706)
Q Consensus       456 -~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-------~~  526 (706)
                       ...++|+|++++- +|.+++.+.. ....+...+..++.+++..+.-||..+   |+|+|++++|||++.       +.
T Consensus       107 ~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~  182 (268)
T PRK15123        107 TRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDL  182 (268)
T ss_pred             cceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCc
Confidence             3468999999986 8999885322 123455677789999999999999998   999999999999985       46


Q ss_pred             CeEEeeeccccc
Q 005236          527 NPKISDFGLARA  538 (706)
Q Consensus       527 ~~kl~Dfgla~~  538 (706)
                      .+.|+||+.++.
T Consensus       183 ~~~LIDl~r~~~  194 (268)
T PRK15123        183 KLSVIDLHRAQI  194 (268)
T ss_pred             eEEEEECCcccc
Confidence            899999998864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.84  E-value=5.3e-10  Score=125.83  Aligned_cols=206  Identities=21%  Similarity=0.271  Sum_probs=147.0

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeCC-CcEEEEE---EcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVK---RLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK---~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      ....+.+.+.+-+-+|.++.++.+.-.. +...+.|   ...+......+.+..+-.+.-..+||-+++...-+.-....
T Consensus       800 rsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~  879 (1205)
T KOG0606|consen  800 RSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPL  879 (1205)
T ss_pred             cCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCc
Confidence            3456788888899999999998775422 2222222   22222222334444444444445567777666555667788


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      +|+++|..+++|...|+...   ..+..-....+..+..+++|||...   +.|+|++|.|+++..+++.++.|||....
T Consensus       880 ~L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~  953 (1205)
T KOG0606|consen  880 PLVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSK  953 (1205)
T ss_pred             chhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccc
Confidence            99999999999999886543   2333344456667888999999876   89999999999999999999999985433


Q ss_pred             cCC---------------------CCCc--------ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCC
Q 005236          539 FGG---------------------DETE--------GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKK  589 (706)
Q Consensus       539 ~~~---------------------~~~~--------~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~  589 (706)
                      .+.                     ....        .......+|+.|.+||...+......+|.|++|++++|.++|.+
T Consensus       954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen  954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred             cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence            210                     0000        01223578999999999999999999999999999999999999


Q ss_pred             CCCCC
Q 005236          590 NRGFY  594 (706)
Q Consensus       590 p~~~~  594 (706)
                      |+...
T Consensus      1034 p~na~ 1038 (1205)
T KOG0606|consen 1034 PFNAE 1038 (1205)
T ss_pred             CCCCc
Confidence            97543

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.83  E-value=3.1e-08  Score=94.47  Aligned_cols=125  Identities=22%  Similarity=0.262  Sum_probs=82.4

Q ss_pred             eEEEEEeCCCcEEEEEEcCccc--------------h------------hhHHHHHHHHHHHhhcCCc--ceeeeEeEEE
Q 005236          402 PVYKGTLADEQEIAVKRLSKIS--------------E------------QGLKELKNEIILFSKLQHR--NLVKLLGCCI  453 (706)
Q Consensus       402 ~Vy~~~~~~~~~vavK~~~~~~--------------~------------~~~~~~~~E~~~l~~l~h~--niv~l~~~~~  453 (706)
                      .||.|...++..+|||......              .            ......++|...|.++..-  ++.+.+.+  
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~--   78 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY--   78 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence            3899999999999999763210              0            0123567899999999866  45666644  


Q ss_pred             eCCeeEEEEecCC--CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHH-HHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          454 HGEEKLLIYEFMP--NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY-LHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       454 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~-LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                        ....+||||++  |..+..+... .    ++......++.+++..+.. +|..+   |+|+||.+.|||++++ .+.|
T Consensus        79 --~~~~ivME~I~~~G~~~~~l~~~-~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~i  147 (188)
T PF01163_consen   79 --NRNVIVMEYIGEDGVPLPRLKDV-D----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYI  147 (188)
T ss_dssp             --ETTEEEEE--EETTEEGGCHHHC-G----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE
T ss_pred             --eCCEEEEEecCCCccchhhHHhc-c----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEE
Confidence              24579999998  5555443321 1    1123445677778885555 56776   9999999999999988 9999


Q ss_pred             eeecccccc
Q 005236          531 SDFGLARAF  539 (706)
Q Consensus       531 ~Dfgla~~~  539 (706)
                      +|||.+...
T Consensus       148 IDf~qav~~  156 (188)
T PF01163_consen  148 IDFGQAVDS  156 (188)
T ss_dssp             --GTTEEET
T ss_pred             EecCcceec
Confidence            999988754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.68  E-value=5.1e-07  Score=92.66  Aligned_cols=194  Identities=15%  Similarity=0.172  Sum_probs=128.6

Q ss_pred             CccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceee--------eEeEEEeCCeeEEE
Q 005236          390 SINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK--------LLGCCIHGEEKLLI  461 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------l~~~~~~~~~~~lV  461 (706)
                      ...+.||+|+-+.+|-.-.  -...+.|+.+........+...|  +...-.||-+-.        |+|- ..+...-+.
T Consensus        14 ~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aqk~a~--la~~p~~p~~~~rvaWPqa~L~G~-~~~~~iGfl   88 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQKVAE--LAATPDAPLLNYRVAWPQATLHGG-RRGKVIGFL   88 (637)
T ss_pred             CCCccccCCccceeeecch--hhchhheeecCCCchHHHHHHHH--hccCCCCcchhhhhcccHHHhhCC-CccceeEEe
Confidence            4558899999999995422  12235566655444333222222  122224554322        1111 111224577


Q ss_pred             EecCCCCC-hhhhhh---cccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          462 YEFMPNKS-LDSFIF---DQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       462 ~e~~~~gs-L~~~l~---~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      |..+++.- ...++.   +.......+|...++.+..+|.+.+.||++|   .+-+|+.++|+||.+++.+.|.|=..-.
T Consensus        89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfq  165 (637)
T COG4248          89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQ  165 (637)
T ss_pred             cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEccccee
Confidence            88777652 222221   2344566899999999999999999999998   8889999999999999999999844333


Q ss_pred             ccCCCCCcccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhC-CCCCCCC
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSG-KKNRGFY  594 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG-~~p~~~~  594 (706)
                      ..   .......-.+|...|.+||.-.     +..-+...|-|.||+++++++.| +.||...
T Consensus       166 i~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         166 IN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             ec---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            22   1122223357889999999764     33556789999999999999987 8998754

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.56  E-value=4.1e-07  Score=89.08  Aligned_cols=135  Identities=19%  Similarity=0.195  Sum_probs=94.9

Q ss_pred             CCccceeccCCceeEEEEEeCCCcEEEEEEcCcc--------------------c--hhhHHHHHHHHHHHhhcCCc--c
Q 005236          389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI--------------------S--EQGLKELKNEIILFSKLQHR--N  444 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--------------------~--~~~~~~~~~E~~~l~~l~h~--n  444 (706)
                      ..+.++||-|--+.||.|....|.++|||.=+..                    +  .-.....++|.+.|.+|.-.  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            4566899999999999999999999999953210                    0  01123467899999998755  5


Q ss_pred             eeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC
Q 005236          445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ  524 (706)
Q Consensus       445 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~  524 (706)
                      +.+.++.    +.-.+||||++|--|...-.     ..-+...   ++..|++-+..+-..|   |||+|+.+-||+|++
T Consensus       173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~-----~~en~~~---il~~il~~~~~~~~~G---iVHGDlSefNIlV~~  237 (304)
T COG0478         173 VPKPIAW----NRHAVVMEYIEGVELYRLRL-----DVENPDE---ILDKILEEVRKAYRRG---IVHGDLSEFNILVTE  237 (304)
T ss_pred             CCCcccc----ccceeeeehcccceeecccC-----cccCHHH---HHHHHHHHHHHHHHcC---ccccCCchheEEEec
Confidence            5555543    45689999999976654321     1122233   3334444444444445   999999999999999


Q ss_pred             CCCeEEeeeccccc
Q 005236          525 DMNPKISDFGLARA  538 (706)
Q Consensus       525 ~~~~kl~Dfgla~~  538 (706)
                      +|.+.++||-.+..
T Consensus       238 dg~~~vIDwPQ~v~  251 (304)
T COG0478         238 DGDIVVIDWPQAVP  251 (304)
T ss_pred             CCCEEEEeCccccc
Confidence            99999999987754

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.56  E-value=4.7e-07  Score=88.64  Aligned_cols=107  Identities=26%  Similarity=0.290  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHhhcCCcc--eeeeEeEEEeCC----eeEEEEecCCCC-ChhhhhhcccccCCCCHHHHHHHHHHHHHHH
Q 005236          427 LKELKNEIILFSKLQHRN--LVKLLGCCIHGE----EKLLIYEFMPNK-SLDSFIFDQERCKLLDWSKRFHIICGTARGL  499 (706)
Q Consensus       427 ~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~----~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l  499 (706)
                      .....+|...+..+....  ..+.+++.....    ..++|+|++++. +|.+++.....   .+......++.++++.+
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i  131 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLI  131 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHH
Confidence            346778888888886443  455666665532    348999999984 89998865332   55566788999999999


Q ss_pred             HHHHhCCCCceEecccCCCcEEEcCCC---CeEEeeecccccc
Q 005236          500 LYLHQDSRLRIIHRDLKASNVLLDQDM---NPKISDFGLARAF  539 (706)
Q Consensus       500 ~~LH~~~~~~ivH~Dikp~Nill~~~~---~~kl~Dfgla~~~  539 (706)
                      +-||..+   |+|+|+++.|||++.+.   .+.++||+-++..
T Consensus       132 ~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  132 AKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            9999998   99999999999999887   8999999988763

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.55  E-value=4.2e-07  Score=99.68  Aligned_cols=140  Identities=16%  Similarity=0.202  Sum_probs=90.9

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhh------------------------------HH----H------HHH
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG------------------------------LK----E------LKN  432 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------------------------~~----~------~~~  432 (706)
                      +-|+.++-|+||+|++++|+.||||+.+..-...                              .+    .      +..
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            6889999999999999999999999986532211                              01    1      223


Q ss_pred             HHHHHhhcC-----CcceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHH-HHHHHhCC
Q 005236          433 EIILFSKLQ-----HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG-LLYLHQDS  506 (706)
Q Consensus       433 E~~~l~~l~-----h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~-l~~LH~~~  506 (706)
                      |..-+.+++     .|++.--.-+..-.....|+|||++|-.+.+...-..  ...+.+.   ++..++++ +..+-..+
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~k~---ia~~~~~~f~~q~~~dg  285 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDRKE---LAELLVRAFLRQLLRDG  285 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCHHH---HHHHHHHHHHHHHHhcC
Confidence            333333331     2332211112223467799999999999988853222  2234332   33333332 22333344


Q ss_pred             CCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       507 ~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                         ++|.|.+|.||+++.+|++.+.|||+...+.
T Consensus       286 ---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         286 ---FFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             ---ccccCCCccceEEecCCcEEEEcCcceecCC
Confidence               9999999999999999999999999987764

>PRK09902 hypothetical protein; Provisional

Probab=98.48  E-value=1.7e-06  Score=82.90  Aligned_cols=140  Identities=14%  Similarity=0.113  Sum_probs=104.1

Q ss_pred             eccCCceeEEEEEeCCCcEEEEEEcCcc------chhhHHHHHHHHHHHhhcCCcc--eeeeEeEEEeC----CeeEEEE
Q 005236          395 LGEGGFGPVYKGTLADEQEIAVKRLSKI------SEQGLKELKNEIILFSKLQHRN--LVKLLGCCIHG----EEKLLIY  462 (706)
Q Consensus       395 lg~G~~g~Vy~~~~~~~~~vavK~~~~~------~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~----~~~~lV~  462 (706)
                      -|+||-+-|++.... |+.+.+|+-...      .+.....|.+|...+.++..-+  +.+.+.+....    ..-+||+
T Consensus        26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            356899999997764 447999987521      1345678999999999986433  44444222221    1357999


Q ss_pred             ecCCC-CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC--eEEeeecccccc
Q 005236          463 EFMPN-KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN--PKISDFGLARAF  539 (706)
Q Consensus       463 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~--~kl~Dfgla~~~  539 (706)
                      |-+++ .+|.+++.+.. ....+...+..++.++++.++-||..+   +.|+|+.+.||+++.++.  ++++||.-++..
T Consensus       105 e~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~~  180 (216)
T PRK09902        105 EDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR  180 (216)
T ss_pred             EeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence            97764 58988885432 234677778899999999999999998   999999999999987777  999999987753

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.47  E-value=2.7e-06  Score=84.38  Aligned_cols=140  Identities=17%  Similarity=0.190  Sum_probs=86.2

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc--eeeeEeEEEeCCeeEEEEecCCCCC-
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN--LVKLLGCCIHGEEKLLIYEFMPNKS-  469 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~~~~gs-  469 (706)
                      ..||+|..+.||+.   .+..+++|......  ......+|.++++.+..-.  +.+.+.+....+...+|||+++|.+ 
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~   81 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS   81 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence            68999999999984   24567888876533  3345788999999886444  4667777777777889999999974 


Q ss_pred             hhhhhh--------------c----ccc--cCCCCHHHHH-HHHH----------HHHH-HHHHHHh-CCCCceEecccC
Q 005236          470 LDSFIF--------------D----QER--CKLLDWSKRF-HIIC----------GTAR-GLLYLHQ-DSRLRIIHRDLK  516 (706)
Q Consensus       470 L~~~l~--------------~----~~~--~~~l~~~~~~-~i~~----------~ia~-~l~~LH~-~~~~~ivH~Dik  516 (706)
                      +...+.              +    -..  .......... ++..          .+.. ...+|.. .....++|+|+.
T Consensus        82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~  161 (226)
T TIGR02172        82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ  161 (226)
T ss_pred             hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence            221110              0    000  0001111100 0000          0011 1122221 123457999999


Q ss_pred             CCcEEEcCCCCeEEeeeccccc
Q 005236          517 ASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       517 p~Nill~~~~~~kl~Dfgla~~  538 (706)
                      |.||++++++ +.|+||+.+..
T Consensus       162 ~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       162 IGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CCcEEEcCCC-cEEEechhcCc
Confidence            9999999988 99999998753

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.47  E-value=6.3e-08  Score=105.55  Aligned_cols=152  Identities=17%  Similarity=0.258  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC------cc-cccccccccCccCccccc
Q 005236          492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET------EG-NTNRVVGTYGYMAPEYAS  564 (706)
Q Consensus       492 ~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~------~~-~~~~~~gt~~y~aPE~~~  564 (706)
                      +.+++.||.|+|...  .+||++|.|++|.++..+..||+.|+.+........      .. ..........|.|||++.
T Consensus       105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            345669999999865  699999999999999999999999999876543111      00 111123456899999999


Q ss_pred             cCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhc
Q 005236          565 DGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCV  643 (706)
Q Consensus       565 ~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl  643 (706)
                      ....+.++|+||+|+++|-+.. |+.-+..............     ..+.......    .... .   ++.+=+...+
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~-----~~~~~~~~~s----~~~p-~---el~~~l~k~l  249 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN-----LLNAGAFGYS----NNLP-S---ELRESLKKLL  249 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc-----cccccccccc----ccCc-H---HHHHHHHHHh
Confidence            9899999999999999999995 4444332221111111100     0000000000    0111 1   2233445789


Q ss_pred             CCCCCCCCChhHHHH
Q 005236          644 QQYPEDRPCMPSVIL  658 (706)
Q Consensus       644 ~~~p~~RPt~~ev~~  658 (706)
                      ..++.-||++.++..
T Consensus       250 ~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  250 NGDSAVRPTLDLLLS  264 (700)
T ss_pred             cCCcccCcchhhhhc
Confidence            999999998877753

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.42  E-value=2.8e-06  Score=81.78  Aligned_cols=138  Identities=15%  Similarity=0.138  Sum_probs=93.6

Q ss_pred             hccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHH---------HHHHHHHHhhcCC---cceeeeEeEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKE---------LKNEIILFSKLQH---RNLVKLLGCC  452 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h---~niv~l~~~~  452 (706)
                      ...+|.+.+++-......|.+... +|+.+++|..+.......+.         ..+++..+.+++.   ..+..++.+.
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~  107 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA  107 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence            346888888888888888888776 56889999876533322222         2234444444432   2233333332


Q ss_pred             Ee-----CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC
Q 005236          453 IH-----GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN  527 (706)
Q Consensus       453 ~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~  527 (706)
                      ..     ....+++|||++|..|.++..       ++.    .++..+++++.-||..|   ++|+|.+|.|+++.+++ 
T Consensus       108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-  172 (229)
T PF06176_consen  108 EKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-  172 (229)
T ss_pred             eeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-
Confidence            22     234568999999998876541       221    25566788899999998   99999999999998655 


Q ss_pred             eEEeeeccccc
Q 005236          528 PKISDFGLARA  538 (706)
Q Consensus       528 ~kl~Dfgla~~  538 (706)
                      ++++||+..+.
T Consensus       173 i~iID~~~k~~  183 (229)
T PF06176_consen  173 IRIIDTQGKRM  183 (229)
T ss_pred             EEEEECccccc
Confidence            99999987654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=98.40  E-value=5.3e-07  Score=73.10  Aligned_cols=72  Identities=40%  Similarity=0.804  Sum_probs=57.7

Q ss_pred             CceEEeeccCCCCCCccccccccCHhHHHHHHhh-cCccccccccccCCCCceeeeee-cccccccccCCCCccEEEE
Q 005236          225 DGFIKFTAMKLPDATPSWVSKSMNLKECREKCLE-NSSCMAYTNSDIRGGGSGCAMWF-GELIDMRDFPDGGQDLYIR  300 (706)
Q Consensus       225 ~~f~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~-~CsC~a~~~~~~~~~~~~c~~~~-~~l~d~~~~~~~~~dlylr  300 (706)
                      ..|++++++.+++..... ....++++|++.|++ +|+|.||.|.+   ++.+|.+|. +.+.+....+..+.++|.+
T Consensus         4 ~~f~~~~~~~l~~~~~~~-~~~~s~~~C~~~C~~~~~~C~s~~y~~---~~~~C~l~~~~~~~~~~~~~~~~~~~y~~   77 (78)
T smart00473        4 DCFVRLPNTKLPGFSRIV-ISVASLEECASKCLNSNCSCRSFTYNN---GTKGCLLWSESSLGDARLFPSGGVDLYEK   77 (78)
T ss_pred             ceeEEecCccCCCCccee-EcCCCHHHHHHHhCCCCCceEEEEEcC---CCCEEEEeeCCccccceecccCCceeEEe
Confidence            569999999999765532 457899999999999 99999999975   457899998 8888777555556667665

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.24  E-value=8.8e-06  Score=81.33  Aligned_cols=144  Identities=21%  Similarity=0.193  Sum_probs=86.4

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCc--ceeeeEeEEEeC---CeeEEEEecCC
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--NLVKLLGCCIHG---EEKLLIYEFMP  466 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lV~e~~~  466 (706)
                      ++.|+.|..+.||+....+ ..+++|.....  .....+..|..+++.+...  .+.+++......   ...+++|++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            3679999999999999977 69999987554  4556788899888888533  356666654333   34689999999


Q ss_pred             CCChhh----------------hhh---ccc-ccCCCCHHH---------HHHH------------HHHHHH-HHHHHHh
Q 005236          467 NKSLDS----------------FIF---DQE-RCKLLDWSK---------RFHI------------ICGTAR-GLLYLHQ  504 (706)
Q Consensus       467 ~gsL~~----------------~l~---~~~-~~~~l~~~~---------~~~i------------~~~ia~-~l~~LH~  504 (706)
                      +..+..                .+.   ... .........         ....            ...+.+ .+..++.
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (239)
T PF01636_consen   79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA  158 (239)
T ss_dssp             SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence            998877                111   110 000011100         0000            111222 2333332


Q ss_pred             ----CCCCceEecccCCCcEEEc-CCCCeEEeeeccccc
Q 005236          505 ----DSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARA  538 (706)
Q Consensus       505 ----~~~~~ivH~Dikp~Nill~-~~~~~kl~Dfgla~~  538 (706)
                          .....++|+|+.|.|||++ +++.+.|+||+.+..
T Consensus       159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             hhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence                2345699999999999999 666668999998754

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.20  E-value=8.2e-06  Score=89.24  Aligned_cols=138  Identities=15%  Similarity=0.200  Sum_probs=88.1

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhh-------------------------------HHH------HHHHHH
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG-------------------------------LKE------LKNEII  435 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------------------------------~~~------~~~E~~  435 (706)
                      +.||.-+.|.||+|++++|+.||||+-+..-+..                               .+.      |.+|++
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            7899999999999999999999999976532211                               011      233333


Q ss_pred             HHh----hcCCcc------eeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHH-HHh
Q 005236          436 LFS----KLQHRN------LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY-LHQ  504 (706)
Q Consensus       436 ~l~----~l~h~n------iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~-LH~  504 (706)
                      -..    .+.|-+      |.+++--  -...+.|+||||+|.-+.+.-.-..  ..++...   ++..+.++... +-.
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~---i~~~l~~~~~~qIf~  319 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAIDK--RGISPHD---ILNKLVEAYLEQIFK  319 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHHHH--cCCCHHH---HHHHHHHHHHHHHHh
Confidence            222    233444      3333222  2347899999999998876542111  1244443   33333333222 222


Q ss_pred             CCCCceEecccCCCcEEEcC----CCCeEEeeeccccccC
Q 005236          505 DSRLRIIHRDLKASNVLLDQ----DMNPKISDFGLARAFG  540 (706)
Q Consensus       505 ~~~~~ivH~Dikp~Nill~~----~~~~kl~Dfgla~~~~  540 (706)
                      .|   ++|+|-+|.||+++.    ++.+.+.|||+...+.
T Consensus       320 ~G---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  320 TG---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             cC---CccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            34   999999999999994    6789999999988753

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.19  E-value=1.8e-05  Score=79.78  Aligned_cols=141  Identities=15%  Similarity=0.119  Sum_probs=86.3

Q ss_pred             eeccCCc-eeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEecCCCCChh
Q 005236          394 KLGEGGF-GPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYEFMPNKSLD  471 (706)
Q Consensus       394 ~lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL~  471 (706)
                      .|..|.. ..||+.... +..++||+.....   ...+.+|+.++..+. +--+.+++.+....+..++|||+++|.+|.
T Consensus         5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~   80 (244)
T cd05150           5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA   80 (244)
T ss_pred             ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence            4555555 789998765 4678888875543   345677888888874 344567777776666789999999998876


Q ss_pred             hhhh-------------------cccc-cCCCC--HHHHHHHHH--------------------HHHHHHHHHHh----C
Q 005236          472 SFIF-------------------DQER-CKLLD--WSKRFHIIC--------------------GTARGLLYLHQ----D  505 (706)
Q Consensus       472 ~~l~-------------------~~~~-~~~l~--~~~~~~i~~--------------------~ia~~l~~LH~----~  505 (706)
                      ....                   .... .....  ....+....                    .+...+..|-.    .
T Consensus        81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (244)
T cd05150          81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE  160 (244)
T ss_pred             HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence            4421                   0000 00000  000000000                    01111222211    1


Q ss_pred             CCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       506 ~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ....++|+|+.|.|||++++....|+||+.+..
T Consensus       161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             CceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            234599999999999999988889999998753

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.15  E-value=9.2e-06  Score=77.86  Aligned_cols=105  Identities=22%  Similarity=0.219  Sum_probs=83.7

Q ss_pred             HHHHHHHhhcCC-cceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCc
Q 005236          431 KNEIILFSKLQH-RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR  509 (706)
Q Consensus       431 ~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~  509 (706)
                      ..|..+++.+++ +++++++|.|    ..++|.||...+++...-..-...-..+|..+.+||.++++.+.+|++.....
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            458888999976 6999999999    45789999998766422100011123689999999999999999999865555


Q ss_pred             eEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          510 IIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       510 ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +.-.|++|+|+-+++++++|++|...+...
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            888999999999999999999999877654

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.08  E-value=4.9e-07  Score=97.49  Aligned_cols=190  Identities=18%  Similarity=0.157  Sum_probs=134.6

Q ss_pred             HhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc-eeeeEeEEEeCCeeEEEE
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN-LVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~  462 (706)
                      ..+.-+......+++++++++|.+-...+...++.+...     ....-++++|.+++||| .++.++-+..++...+++
T Consensus       239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~  313 (829)
T KOG0576|consen  239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPM  313 (829)
T ss_pred             CCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhh
Confidence            334445555778999999999988755555556655332     45567899999999999 666666666677888999


Q ss_pred             ecCCCC-ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          463 EFMPNK-SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      +++..+ +-..-+...+  -.+.......+...-++++++||+..   -+|+|    ||+..+ +..|..||+....+..
T Consensus       314 ~i~s~~rs~~~~~~~se--~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~  383 (829)
T KOG0576|consen  314 RICSTGRSSALEMTVSE--IALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTR  383 (829)
T ss_pred             hhhcCCccccccCChhh--Hhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCc
Confidence            999877 2211110000  01112223345556677899999764   48888    777665 6789999999876643


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCC
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNR  591 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~  591 (706)
                      ..   ..+...+++.++|||++....+..+.|+|++|+-..++--|-+|-
T Consensus       384 ~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  384 TM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             cc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence            22   334467899999999999999999999999999878887777663

>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins

Probab=98.07  E-value=5e-06  Score=59.06  Aligned_cols=44  Identities=50%  Similarity=0.727  Sum_probs=39.9

Q ss_pred             CCCCCCCCCCCcccCCCCCCcCCCCCCC--CCCCcceeEeeeeccC
Q 005236          663 EIVLPQPKQPGYLADRKSTRLDSSLSMP--ESSSTNTITISELEGR  706 (706)
Q Consensus       663 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  706 (706)
                      ...+|+|++|+|+..+...+..++++..  +.+++|+||+|.|++|
T Consensus         3 ~~~LP~PKqPgF~~~r~~~e~~sSss~~~~~~~SvNevTiT~l~~R   48 (48)
T PF11883_consen    3 TATLPQPKQPGFFTGRSPSETDSSSSKQRDESCSVNEVTITMLEAR   48 (48)
T ss_pred             cccCCCCCCCCEEeEcCCCCcCCCcccccCCCCCeeeEEEEeEecC
Confidence            4679999999999999888888888776  8999999999999998

; GO: 0004674 protein serine/threonine kinase activity

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.00  E-value=7.3e-05  Score=72.86  Aligned_cols=150  Identities=19%  Similarity=0.221  Sum_probs=94.5

Q ss_pred             HHHHHHhccCCCccc---eeccCCceeEEEEEeCCCcEEEEEEcCccchhh-------------------HH-----HHH
Q 005236          379 LATIANATDNFSINK---KLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG-------------------LK-----ELK  431 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~---~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------------------~~-----~~~  431 (706)
                      ...+....+...+.+   .|..|--+.||+|...++..+|||+........                   .+     -..
T Consensus        37 ~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~  116 (268)
T COG1718          37 LETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWAR  116 (268)
T ss_pred             HHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHH
Confidence            444455555555544   456777889999998889999999875421110                   00     123


Q ss_pred             HHHHHHhhcC--CcceeeeEeEEEeCCeeEEEEecCCCCCh-hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 005236          432 NEIILFSKLQ--HRNLVKLLGCCIHGEEKLLIYEFMPNKSL-DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL  508 (706)
Q Consensus       432 ~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~e~~~~gsL-~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~  508 (706)
                      +|+.-|.++.  +-.+.+-+++    ..-.|||||+...-+ .-.|.+-    .+...+...+..++++.+.-|-...  
T Consensus       117 kEf~NL~R~~eAGVrvP~Pi~~----~~nVLvMEfIg~~g~pAP~LkDv----~~e~~e~~~~~~~~v~~~~~l~~~a--  186 (268)
T COG1718         117 KEFRNLKRAYEAGVRVPEPIAF----RNNVLVMEFIGDDGLPAPRLKDV----PLELEEAEGLYEDVVEYMRRLYKEA--  186 (268)
T ss_pred             HHHHHHHHHHHcCCCCCCceee----cCCeEEEEeccCCCCCCCCcccC----CcCchhHHHHHHHHHHHHHHHHHhc--
Confidence            4555555553  2223333333    245799999975421 1111111    1222245667777888888777622  


Q ss_pred             ceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          509 RIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       509 ~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      .+||+||..-|||+. ++.+.|+|||.|...
T Consensus       187 ~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~  216 (268)
T COG1718         187 GLVHGDLSEYNILVH-DGEPYIIDVSQAVTI  216 (268)
T ss_pred             CcccccchhhheEEE-CCeEEEEECcccccc
Confidence            399999999999999 899999999988764

>PLN02876 acyl-CoA dehydrogenase

Probab=97.98  E-value=0.0001  Score=87.54  Aligned_cols=79  Identities=14%  Similarity=0.312  Sum_probs=58.5

Q ss_pred             cceeccCCceeEEEEEeCCC---cEEEEEEcCccc-hhhHHHHHHHHHHHhhcC-Ccce--eeeEeEEEeC---CeeEEE
Q 005236          392 NKKLGEGGFGPVYKGTLADE---QEIAVKRLSKIS-EQGLKELKNEIILFSKLQ-HRNL--VKLLGCCIHG---EEKLLI  461 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lV  461 (706)
                      .+.|+.|.+..+|+....++   ..+++|+..... ......+.+|+.+++.+. |+++  .+++.+|.+.   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            47889999999999887554   467888764322 223456889999999995 6665  7788887664   357899


Q ss_pred             EecCCCCCh
Q 005236          462 YEFMPNKSL  470 (706)
Q Consensus       462 ~e~~~~gsL  470 (706)
                      |||++|..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999998754

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.93  E-value=7.3e-05  Score=74.94  Aligned_cols=73  Identities=14%  Similarity=0.240  Sum_probs=46.0

Q ss_pred             ceeccCCce-eEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCc---ceeeeEeEEEeC---CeeEEEEecC
Q 005236          393 KKLGEGGFG-PVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR---NLVKLLGCCIHG---EEKLLIYEFM  465 (706)
Q Consensus       393 ~~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~---~~~~lV~e~~  465 (706)
                      +.|+.|+.. .||+.    +..+++|..+...  ....+..|..++..+...   -+.+.++.....   ...+++|+++
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~~--~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSAAG--YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCccc--hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            567777776 58875    2357777654322  245788899998887532   234444433222   1348899999


Q ss_pred             CCCChh
Q 005236          466 PNKSLD  471 (706)
Q Consensus       466 ~~gsL~  471 (706)
                      +|.++.
T Consensus        77 ~G~~l~   82 (235)
T cd05155          77 EGETAT   82 (235)
T ss_pred             cCCCCC
Confidence            998774

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.82  E-value=0.00015  Score=66.90  Aligned_cols=129  Identities=21%  Similarity=0.255  Sum_probs=90.3

Q ss_pred             CccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCccee-eeEeEEEeCCeeEEEEecCCCC
Q 005236          390 SINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV-KLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      ...+.|++|++|.||+|.+.++ .+|+|+-...+  ....++.|++++..++-.++- +++.+.    .-.+.|||+.|-
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~   97 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRGG-EVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGR   97 (201)
T ss_pred             hhhhhhhcccccEEEEeeccCc-eEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCc
Confidence            4458899999999999999654 88888765433  346889999999999866653 344442    234459999998


Q ss_pred             ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccC-CCcEEEcCCCCeEEeeeccccc
Q 005236          469 SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLK-ASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       469 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik-p~Nill~~~~~~kl~Dfgla~~  538 (706)
                      .|.++-...      +.    +-+..+++.---|...+   |-|..|. |..++|-.++.+.|+||..|..
T Consensus        98 ~L~~~~~~~------~r----k~l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112          98 PLGKLEIGG------DR----KHLLRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             chhhhhhcc------cH----HHHHHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            887654211      11    22334555545555555   9999985 6666666666999999999874

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.80  E-value=0.00019  Score=71.83  Aligned_cols=141  Identities=21%  Similarity=0.256  Sum_probs=82.5

Q ss_pred             ceeccCCceeEEEEEeCC--CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcce-eeeEeEEEeCCeeEEEEecCCCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD--EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL-VKLLGCCIHGEEKLLIYEFMPNKS  469 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~~gs  469 (706)
                      +.|..|-...+|+....+  ++.+++|........ .-....|+.++..+...++ +++++.+.    ..+||||++|.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence            577888889999998764  678889976543221 1233468888888854444 44444322    247999999987


Q ss_pred             hhhh-------h----------hccccc--------CCCC-HHHHHHHHH----------------------HHH---HH
Q 005236          470 LDSF-------I----------FDQERC--------KLLD-WSKRFHIIC----------------------GTA---RG  498 (706)
Q Consensus       470 L~~~-------l----------~~~~~~--------~~l~-~~~~~~i~~----------------------~ia---~~  498 (706)
                      +...       +          +.....        .... +..+..+..                      .+.   ..
T Consensus        79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  158 (235)
T cd05157          79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW  158 (235)
T ss_pred             CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence            6422       1          110100        0111 122112111                      111   11


Q ss_pred             HH-HHHhC-CCCceEecccCCCcEEEcC-CCCeEEeeeccccc
Q 005236          499 LL-YLHQD-SRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARA  538 (706)
Q Consensus       499 l~-~LH~~-~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgla~~  538 (706)
                      |. .+... ....++|+|+.+.|||+++ ++.+.|+||..|..
T Consensus       159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            11 11111 2346999999999999998 57899999998764

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.80  E-value=0.00028  Score=67.99  Aligned_cols=131  Identities=16%  Similarity=0.282  Sum_probs=90.7

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCccc----------------hhhHHHHHHHHHHHhhcC------CcceeeeE
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS----------------EQGLKELKNEIILFSKLQ------HRNLVKLL  449 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv~l~  449 (706)
                      ...||+|+.-.||.  +++.....||+.....                ....++..+|+.....+.      +.+|.+++
T Consensus         6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            46899999999995  4555667888775544                223456667777666655      78899999


Q ss_pred             eEEEeCCeeEEEEecCCC------CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc
Q 005236          450 GCCIHGEEKLLIYEFMPN------KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD  523 (706)
Q Consensus       450 ~~~~~~~~~~lV~e~~~~------gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~  523 (706)
                      |...+....-+|+|.+.+      -+|.+++.+.    .++. ...+.   +-+-..||-+++   |+.+|++|.||++.
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~----~~~~-~~~~~---L~~f~~~l~~~~---Iv~~dl~~~NIv~~  152 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEG----GLTE-ELRQA---LDEFKRYLLDHH---IVIRDLNPHNIVVQ  152 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcC----CccH-HHHHH---HHHHHHHHHHcC---CeecCCCcccEEEE
Confidence            999999999999998743      3577777332    2444 33333   334445666555   99999999999996


Q ss_pred             CCC----CeEEee-ecc
Q 005236          524 QDM----NPKISD-FGL  535 (706)
Q Consensus       524 ~~~----~~kl~D-fgl  535 (706)
                      ...    .+.|+| ||-
T Consensus       153 ~~~~~~~~lvlIDG~G~  169 (199)
T PF10707_consen  153 RRDSGEFRLVLIDGLGE  169 (199)
T ss_pred             ecCCCceEEEEEeCCCC
Confidence            432    577777 443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.79  E-value=0.00014  Score=73.91  Aligned_cols=139  Identities=17%  Similarity=0.129  Sum_probs=79.7

Q ss_pred             eeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcce-eeeEeEEEeCCeeEEEEecCCCCChhh
Q 005236          394 KLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL-VKLLGCCIHGEEKLLIYEFMPNKSLDS  472 (706)
Q Consensus       394 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~~gsL~~  472 (706)
                      .+..|-...+|+... +++.+++|..........-...+|..+++.+....+ .+++...    ...+||||++|..+..
T Consensus         3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~----~~~~v~e~i~G~~~~~   77 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN----EHWLLVEWLEGEVITL   77 (256)
T ss_pred             cCCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe----CCEEEEEeccCccccc
Confidence            456688889998874 566888887654322211134678888888864433 3344332    2368999999977643


Q ss_pred             h-----------------hhcccc-cCCCCHHHH-HHHHHH---------HHHHHHHHHhC-----CCCceEecccCCCc
Q 005236          473 F-----------------IFDQER-CKLLDWSKR-FHIICG---------TARGLLYLHQD-----SRLRIIHRDLKASN  519 (706)
Q Consensus       473 ~-----------------l~~~~~-~~~l~~~~~-~~i~~~---------ia~~l~~LH~~-----~~~~ivH~Dikp~N  519 (706)
                      -                 |+.... ...++.... ..+..+         +...+..+-..     .+..++|+|+.|.|
T Consensus        78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N  157 (256)
T TIGR02721        78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN  157 (256)
T ss_pred             ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence            1                 111110 011121111 111111         11112222211     13458999999999


Q ss_pred             EEEcCCCCeEEeeeccccc
Q 005236          520 VLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       520 ill~~~~~~kl~Dfgla~~  538 (706)
                      |++++++ +.|+||+.+..
T Consensus       158 il~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       158 LVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             EEEeCCC-CEEEeccccCc
Confidence            9999877 78999998864

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK10593 hypothetical protein; Provisional

Probab=97.79  E-value=0.00039  Score=72.17  Aligned_cols=78  Identities=14%  Similarity=0.094  Sum_probs=57.1

Q ss_pred             CccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCC---cceeeeEeEEEeC---CeeEEEEe
Q 005236          390 SINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH---RNLVKLLGCCIHG---EEKLLIYE  463 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~---~~~~lV~e  463 (706)
                      .-.+.||.|..+.||+....++ .+++|..+...  ....+..|...++.|.-   ..+.++++.+..+   +..++|||
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE   93 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQG-NPMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE   93 (297)
T ss_pred             heeeecCCccceeEEEEEcCCC-CEEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence            3347899999999999877665 46666643211  23578899999988853   3578888877543   56899999


Q ss_pred             cCCCCCh
Q 005236          464 FMPNKSL  470 (706)
Q Consensus       464 ~~~~gsL  470 (706)
                      +++++++
T Consensus        94 ~i~G~~~  100 (297)
T PRK10593         94 RLRGVSV  100 (297)
T ss_pred             ccCCEec
Confidence            9998765

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.74  E-value=0.00045  Score=73.80  Aligned_cols=75  Identities=13%  Similarity=0.180  Sum_probs=54.8

Q ss_pred             ceeccCCceeEEEEEeCCC-cEEEEEEcCcc-------chhhHHHHHHHHHHHhhcC---CcceeeeEeEEEeCCeeEEE
Q 005236          393 KKLGEGGFGPVYKGTLADE-QEIAVKRLSKI-------SEQGLKELKNEIILFSKLQ---HRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV  461 (706)
                      +.||.|.+..||++...+| +.++||.-...       .+...+.+..|.+.|..+.   -.++++++.+  +.+..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            6899999999999999877 58999974321       1234567777888887763   2456667766  44667999


Q ss_pred             EecCCCCC
Q 005236          462 YEFMPNKS  469 (706)
Q Consensus       462 ~e~~~~gs  469 (706)
                      |||+++..
T Consensus       110 ME~L~~~~  117 (401)
T PRK09550        110 MEDLSDHK  117 (401)
T ss_pred             EecCCCcc
Confidence            99998743

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.63  E-value=0.00051  Score=79.87  Aligned_cols=200  Identities=20%  Similarity=0.187  Sum_probs=137.4

Q ss_pred             HHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE----EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHH
Q 005236          427 LKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL----LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL  502 (706)
Q Consensus       427 ~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~----lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~L  502 (706)
                      ......|...+.++.|+|++.++.+..++...-    +..|++..-++...+..   ...++....+.+..++.+||+|+
T Consensus       226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~---v~~i~~~~~r~~~~~~~~GL~~~  302 (1351)
T KOG1035|consen  226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS---VGSIPLETLRILHQKLLEGLAYL  302 (1351)
T ss_pred             HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh---ccccCHHHHHHHHHHHhhhHHHH
Confidence            334556777888999999999999987654433    44577888788777743   34578888888999999999999


Q ss_pred             HhCCCCceEecccCCC---cEEEcCCCCeEEe--eeccccccCCCCCcccccccccccCccCccccccCCCCc--chhhH
Q 005236          503 HQDSRLRIIHRDLKAS---NVLLDQDMNPKIS--DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV--KSDVF  575 (706)
Q Consensus       503 H~~~~~~ivH~Dikp~---Nill~~~~~~kl~--Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~--~sDv~  575 (706)
                      |+..   ..|.-+..+   +--++.++...++  ||+.++.+.......   ...-+..+.+||......+..  ..|+|
T Consensus       303 h~~~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~---~~~~~~~~~~~e~~~~~~~~~~r~~dL~  376 (1351)
T KOG1035|consen  303 HSLS---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF---SDLLAEIRNADEDLKENTAKKSRLTDLW  376 (1351)
T ss_pred             HHhc---cceeEEecccccccccCccceeecchhhhcccccCCCcccch---hhcCccccccccccccccchhhhhhHHH
Confidence            9985   666555555   5566777778877  999888764322211   123355678888877665554  47999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhH
Q 005236          576 SFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPS  655 (706)
Q Consensus       576 SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~e  655 (706)
                      .+|..+..+..|..+.....                  .+..+++.....        ...+....|+..++++|++..+
T Consensus       377 ~lgll~~~~~~~~~i~~~~~------------------~~~~~l~~~~~~--------~~~d~~~~~~~~~~~~Rl~~~~  430 (1351)
T KOG1035|consen  377 CLGLLLLQLSQGEDISEKSA------------------VPVSLLDVLSTS--------ELLDALPKCLDEDSEERLSALE  430 (1351)
T ss_pred             HHHHHHhhhhhcCccccccc------------------chhhhhccccch--------hhhhhhhhhcchhhhhccchhh
Confidence            99999999999877632110                  111111111100        2234566899999999999999


Q ss_pred             HHHHhc
Q 005236          656 VILMLG  661 (706)
Q Consensus       656 v~~~L~  661 (706)
                      ++...-
T Consensus       431 ll~~~f  436 (1351)
T KOG1035|consen  431 LLTHPF  436 (1351)
T ss_pred             hhhchh
Confidence            987653

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.55  E-value=0.00059  Score=70.97  Aligned_cols=143  Identities=20%  Similarity=0.191  Sum_probs=86.7

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc--eeeeEeE------EEeCCeeEEEEe
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN--LVKLLGC------CIHGEEKLLIYE  463 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~------~~~~~~~~lV~e  463 (706)
                      .+.|..|....+|+....+ ..+++|+...   ...+.+..|+.++..+.+.+  +.+++..      ....+..++|++
T Consensus        19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTDS-GRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeCC-CcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            4677788888999987644 4688888754   23456777888888775433  4444431      123445689999


Q ss_pred             cCCCCChhh----hh----------hccc-c-------cCCCCHHHHH----------HHHHHHHHHHHHHHh----CCC
Q 005236          464 FMPNKSLDS----FI----------FDQE-R-------CKLLDWSKRF----------HIICGTARGLLYLHQ----DSR  507 (706)
Q Consensus       464 ~~~~gsL~~----~l----------~~~~-~-------~~~l~~~~~~----------~i~~~ia~~l~~LH~----~~~  507 (706)
                      |++|..+..    .+          +... .       .....|....          .....+..++.++..    .-+
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            999987643    11          1000 0       0011221111          011123344455543    123


Q ss_pred             CceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          508 LRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       508 ~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ..++|+|+.|.||++++++.+.|+||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            4599999999999999988789999998754

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.47  E-value=0.0013  Score=62.87  Aligned_cols=125  Identities=26%  Similarity=0.362  Sum_probs=89.7

Q ss_pred             cCCCccceeccCCc-eeEEEEEeCCCcEEEEEEcCc---cch------------------hhHHHHHHHHHHHhhcC---
Q 005236          387 DNFSINKKLGEGGF-GPVYKGTLADEQEIAVKRLSK---ISE------------------QGLKELKNEIILFSKLQ---  441 (706)
Q Consensus       387 ~~~~~~~~lg~G~~-g~Vy~~~~~~~~~vavK~~~~---~~~------------------~~~~~~~~E~~~l~~l~---  441 (706)
                      .+++..+.||.|.- |.||++++ +|+.+|+|.+..   ...                  ....-|..|.+...+|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            78899999999999 99999999 566999999321   000                  11234778998888875   


Q ss_pred             Ccce--eeeEeEEEeC------------------CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHH
Q 005236          442 HRNL--VKLLGCCIHG------------------EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY  501 (706)
Q Consensus       442 h~ni--v~l~~~~~~~------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~  501 (706)
                      +.++  |+.+|+..-.                  ....||.||++...                .....-+.+|.+-|..
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------------~~~~~~~~~~~~dl~~  179 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------------PLQIRDIPQMLRDLKI  179 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------------ccchhHHHHHHHHHHH
Confidence            4456  8888887322                  12357788775533                1112345678888899


Q ss_pred             HHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       502 LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      +|..+   |+-+|+++.|..     .-||+|||.+
T Consensus       180 ~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  180 LHKLG---IVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHCC---eeeccCcccccc-----CCEEEecccC
Confidence            99888   999999999986     3489999864

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.46  E-value=0.00076  Score=70.37  Aligned_cols=141  Identities=26%  Similarity=0.352  Sum_probs=84.2

Q ss_pred             ceeccCCceeEEEEEeCC-------CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcce-eeeEeEEEeCCeeEEEEec
Q 005236          393 KKLGEGGFGPVYKGTLAD-------EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL-VKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~  464 (706)
                      +.|..|-...+|+....+       ++.+++|...... ........|..++..+....+ .++++++.    -.+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~----~~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFP----NGRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeC----CCchhhe
Confidence            566677778999988765       4788889865433 223455778888887754333 34555543    2358999


Q ss_pred             CCCCChhhhh-----------------hccccc--C----CC--CHHHHHH--------------------------HHH
Q 005236          465 MPNKSLDSFI-----------------FDQERC--K----LL--DWSKRFH--------------------------IIC  493 (706)
Q Consensus       465 ~~~gsL~~~l-----------------~~~~~~--~----~l--~~~~~~~--------------------------i~~  493 (706)
                      ++|..+....                 +.....  .    ..  -+..+..                          +..
T Consensus        79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (302)
T cd05156          79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE  158 (302)
T ss_pred             eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence            9988775321                 111100  0    00  0111111                          111


Q ss_pred             HHHHHHHHHHh------CCCCceEecccCCCcEEEcCC----CCeEEeeeccccc
Q 005236          494 GTARGLLYLHQ------DSRLRIIHRDLKASNVLLDQD----MNPKISDFGLARA  538 (706)
Q Consensus       494 ~ia~~l~~LH~------~~~~~ivH~Dikp~Nill~~~----~~~kl~Dfgla~~  538 (706)
                      .+.+.+..|..      ..+..++|+|+.|.|||++++    +.++++||..|..
T Consensus       159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            22223334432      235579999999999999985    8899999998854

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK05231 homoserine kinase; Provisional

Probab=97.25  E-value=0.0053  Score=64.59  Aligned_cols=142  Identities=20%  Similarity=0.214  Sum_probs=77.9

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc--eeeeEe------EEEeCCeeEEEEec
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN--LVKLLG------CCIHGEEKLLIYEF  464 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~------~~~~~~~~~lV~e~  464 (706)
                      +.|+.|....+|+....+| .+++|+.....   .+.+..|+.++..|...+  +.+.+.      +....+..++++||
T Consensus        28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~~---~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~  103 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQG-EYVLTLFERLT---AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF  103 (319)
T ss_pred             chhccccccceEEEEeCCC-cEEEEEeccCC---hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence            5677788889999887655 68889875222   233444555555553222  223332      12234567899999


Q ss_pred             CCCCChhh-----------hh---hcccc--------cCCCCH-HHHHH------------HHH-HHHHHHHHHHhC---
Q 005236          465 MPNKSLDS-----------FI---FDQER--------CKLLDW-SKRFH------------IIC-GTARGLLYLHQD---  505 (706)
Q Consensus       465 ~~~gsL~~-----------~l---~~~~~--------~~~l~~-~~~~~------------i~~-~ia~~l~~LH~~---  505 (706)
                      ++|..+..           .|   +....        ...+.| .....            .+. .+...+..+...   
T Consensus       104 l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  183 (319)
T PRK05231        104 LEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWP  183 (319)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccc
Confidence            99975421           11   11000        001111 11111            111 111222333211   


Q ss_pred             -CCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          506 -SRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       506 -~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                       -+..++|+|++|.||+++.+...-|+||+.+..
T Consensus       184 ~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        184 ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence             234699999999999999776668999998753

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.22  E-value=0.0036  Score=64.16  Aligned_cols=31  Identities=26%  Similarity=0.528  Sum_probs=26.2

Q ss_pred             CceEecccCCCcEEEcCCCC-eEEeeeccccc
Q 005236          508 LRIIHRDLKASNVLLDQDMN-PKISDFGLARA  538 (706)
Q Consensus       508 ~~ivH~Dikp~Nill~~~~~-~kl~Dfgla~~  538 (706)
                      ..++|+|++|.|||+++++. .-|+||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            45899999999999998565 56999998864

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02236 choline kinase

Probab=97.11  E-value=0.0038  Score=66.26  Aligned_cols=141  Identities=18%  Similarity=0.269  Sum_probs=82.8

Q ss_pred             ceeccCCceeEEEEEeCC-----CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcce-eeeEeEEEeCCeeEEEEecCC
Q 005236          393 KKLGEGGFGPVYKGTLAD-----EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL-VKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~  466 (706)
                      +.|-.|-...+|+....+     ++.+++|............ ..|..++..+...++ .++++.+..+    .|.||++
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR-~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~  116 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDR-DDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIH  116 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeech-HHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeC
Confidence            456567788999987533     3678888876544333333 678888888864444 3455555332    5899998


Q ss_pred             CCChhhh-----------------hhccc--c-cCCCCHHHHHHHHHHH-----------------HHHHHHH----Hh-
Q 005236          467 NKSLDSF-----------------IFDQE--R-CKLLDWSKRFHIICGT-----------------ARGLLYL----HQ-  504 (706)
Q Consensus       467 ~gsL~~~-----------------l~~~~--~-~~~l~~~~~~~i~~~i-----------------a~~l~~L----H~-  504 (706)
                      +.+|...                 +|...  . .....+.++.++..++                 ...+..|    .. 
T Consensus       117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~  196 (344)
T PLN02236        117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD  196 (344)
T ss_pred             CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence            8777522                 11111  0 0011223332332211                 1111122    21 


Q ss_pred             CCCCceEecccCCCcEEEcC-CCCeEEeeeccccc
Q 005236          505 DSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARA  538 (706)
Q Consensus       505 ~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgla~~  538 (706)
                      ..+..++|+|+++.|||+++ ++.+.|+||..+..
T Consensus       197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            22446999999999999986 47899999998864

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.09  E-value=0.0062  Score=63.66  Aligned_cols=144  Identities=24%  Similarity=0.219  Sum_probs=82.6

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc--eeeeEeE------EEeCCeeEEEEe
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN--LVKLLGC------CIHGEEKLLIYE  463 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~------~~~~~~~~lV~e  463 (706)
                      .+.++.|.-..+|+....++ .+++|+.....  ..+.+..|+.++..|....  +.+++..      ....+..++++|
T Consensus        27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e  103 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE  103 (307)
T ss_pred             ccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence            45677777789999876545 67788765421  1234556677776664322  3343331      112345689999


Q ss_pred             cCCCCChhhh--------------hhccccc---------CCCCHHHHH------------HHHHHHHHHHHHHHh----
Q 005236          464 FMPNKSLDSF--------------IFDQERC---------KLLDWSKRF------------HIICGTARGLLYLHQ----  504 (706)
Q Consensus       464 ~~~~gsL~~~--------------l~~~~~~---------~~l~~~~~~------------~i~~~ia~~l~~LH~----  504 (706)
                      |++|..+...              ++.....         ....|....            .....+.+.++++..    
T Consensus       104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~  183 (307)
T TIGR00938       104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR  183 (307)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence            9998654211              1110000         001111110            011123334555542    


Q ss_pred             CCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       505 ~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ..+..++|+|+++.||++++++...|+||+.+..
T Consensus       184 ~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       184 DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             cCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence            2235699999999999999988778999998753

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.05  E-value=0.00093  Score=67.42  Aligned_cols=136  Identities=15%  Similarity=0.173  Sum_probs=94.3

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcC--ccc------------------hh--hHHHHHHHHHHHhhcCC-c
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLS--KIS------------------EQ--GLKELKNEIILFSKLQH-R  443 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~------------------~~--~~~~~~~E~~~l~~l~h-~  443 (706)
                      --+.+.++||-|--+-||.+-..+|++.++|.-+  ..+                  ..  ..-...+|...|+.|.. -
T Consensus        92 ~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g  171 (465)
T KOG2268|consen   92 SVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG  171 (465)
T ss_pred             hhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence            3467889999999999999999999999888421  110                  00  01234578888888853 2


Q ss_pred             -ceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       444 -niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                       -+.+.++    .+..++|||++.+-.|...-+      ..+...+.   ..+..-+.-|..+|   +||+|..-=||+|
T Consensus       172 fpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~------v~d~~~ly---~~lm~~Iv~la~~G---lIHgDFNEFNimv  235 (465)
T KOG2268|consen  172 FPVPKPID----HNRHCVVMELVDGYPLRQVRH------VEDPPTLY---DDLMGLIVRLANHG---LIHGDFNEFNIMV  235 (465)
T ss_pred             CCCCCccc----ccceeeHHHhhcccceeeeee------cCChHHHH---HHHHHHHHHHHHcC---ceecccchheeEE
Confidence             2333443    345689999999988865431      12333333   33444455667777   9999999999999


Q ss_pred             cCCCCeEEeeeccccc
Q 005236          523 DQDMNPKISDFGLARA  538 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~  538 (706)
                      ++++.++++||-....
T Consensus       236 ~dd~~i~vIDFPQmvS  251 (465)
T KOG2268|consen  236 KDDDKIVVIDFPQMVS  251 (465)
T ss_pred             ecCCCEEEeechHhhc
Confidence            9999999999986543

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.02  E-value=0.0073  Score=62.38  Aligned_cols=139  Identities=15%  Similarity=0.217  Sum_probs=83.5

Q ss_pred             ccceeccCCceeEEEEEeCCCcEEEEEEcC-ccchhhHHHHHHHHHHHhhcCC--cceeeeEeEEEeCC--eeEEEEecC
Q 005236          391 INKKLGEGGFGPVYKGTLADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQH--RNLVKLLGCCIHGE--EKLLIYEFM  465 (706)
Q Consensus       391 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~-~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~--~~~lV~e~~  465 (706)
                      +.+++..|.--.+|..... ++++++.+-. ...........+|+.+++.+.-  .-..+.+++|.++.  ..+.||+|+
T Consensus        29 ~v~~~~~G~sn~t~~~~~~-~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~v  107 (321)
T COG3173          29 IVEEISGGWSNDTFRLGDT-GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWV  107 (321)
T ss_pred             eeeeccCCcccceEEEecC-CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEe
Confidence            3344544444445554443 7778887321 1233345566778888887753  23455667777666  669999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHH-HHHHHH---------------------------------------------
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIIC-GTARGL---------------------------------------------  499 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~-~ia~~l---------------------------------------------  499 (706)
                      +|..+...+....      ..  .+++. .+++.|                                             
T Consensus       108 eGe~~~~~~~~~~------~~--~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~  179 (321)
T COG3173         108 EGEVVWSALPPES------LG--RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPL  179 (321)
T ss_pred             cceeccCcCCccc------ch--HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCch
Confidence            9854333221100      00  01111 333333                                             


Q ss_pred             -----HHHHhC-----CCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          500 -----LYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       500 -----~~LH~~-----~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                           .+|+..     ++..++|+|+++.||+++.+.-+-++||+++..
T Consensus       180 ~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         180 ADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             HHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence                 333322     345799999999999999999999999999875

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.84  E-value=0.01  Score=60.92  Aligned_cols=75  Identities=19%  Similarity=0.221  Sum_probs=48.8

Q ss_pred             CccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC---CcceeeeEeEEEeCCeeEEEEecCC
Q 005236          390 SINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ---HRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      +-.+.|+.|.-..+|+.. .+++.+.||.-.   ......|..|..-|+.|.   --.+.+.+++....+..+|||||++
T Consensus        20 ~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred             eeeEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence            334788989999999987 577889999865   333456788888888773   4457788888888888899999998


Q ss_pred             CC
Q 005236          467 NK  468 (706)
Q Consensus       467 ~g  468 (706)
                      .+
T Consensus        96 ~~   97 (288)
T PF03881_consen   96 MG   97 (288)
T ss_dssp             --
T ss_pred             CC
Confidence            77

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.79  E-value=0.01  Score=62.09  Aligned_cols=74  Identities=12%  Similarity=0.149  Sum_probs=49.7

Q ss_pred             ceeccCCceeEEEEEeCCC-cEEEEEEcCc-------cchhhHHHHHHHHHHHhhcC--Ccc-eeeeEeEEEeCCeeEEE
Q 005236          393 KKLGEGGFGPVYKGTLADE-QEIAVKRLSK-------ISEQGLKELKNEIILFSKLQ--HRN-LVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~-------~~~~~~~~~~~E~~~l~~l~--h~n-iv~l~~~~~~~~~~~lV  461 (706)
                      +.||.|....||++...++ +.|+||.-..       ..+...++..-|...|+...  -|. +++++.+  +.+...+|
T Consensus         1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~v   78 (370)
T TIGR01767         1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTV   78 (370)
T ss_pred             CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceeh
Confidence            3589999999999998654 5899996422       12334556667777776653  343 4445544  55667799


Q ss_pred             EecCCCC
Q 005236          462 YEFMPNK  468 (706)
Q Consensus       462 ~e~~~~g  468 (706)
                      ||+++..
T Consensus        79 MEdL~~~   85 (370)
T TIGR01767        79 MEDLSHH   85 (370)
T ss_pred             HhhCccc
Confidence            9999653

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=96.76  E-value=0.0012  Score=52.48  Aligned_cols=49  Identities=16%  Similarity=0.359  Sum_probs=36.0

Q ss_pred             eeccCCCCCCccccccccCHhHHHHHHhhcCccccccccccCCCCceeeeeec
Q 005236          230 FTAMKLPDATPSWVSKSMNLKECREKCLENSSCMAYTNSDIRGGGSGCAMWFG  282 (706)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~~CsC~a~~~~~~~~~~~~c~~~~~  282 (706)
                      +.++.++.+..... ...+.++|+..|+.+|+|.||.|..   +...|.++..
T Consensus         9 ~~~~~~~g~d~~~~-~~~s~~~Cq~~C~~~~~C~afT~~~---~~~~C~lk~~   57 (73)
T cd01100           9 GSNVDFRGGDLSTV-FASSAEQCQAACTADPGCLAFTYNT---KSKKCFLKSS   57 (73)
T ss_pred             cCCCccccCCccee-ecCCHHHHHHHcCCCCCceEEEEEC---CCCeEEcccC
Confidence            35667766555433 3679999999999999999999974   2456777644

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.72  E-value=0.019  Score=61.24  Aligned_cols=73  Identities=11%  Similarity=0.095  Sum_probs=50.3

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCcc----c---hhhHHHHHHHHHHHhhcC---CcceeeeEeEEEeCCeeEEE
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKI----S---EQGLKELKNEIILFSKLQ---HRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~---~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV  461 (706)
                      .+.||.|....||+.... ++.++||.-...    .   +....+-..|+..|+.+.   ..++.+++.++.  +..+++
T Consensus        37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv  113 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG  113 (418)
T ss_pred             EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence            478999999999998874 557999975421    1   123444455566665553   246777888865  556888


Q ss_pred             EecCCC
Q 005236          462 YEFMPN  467 (706)
Q Consensus       462 ~e~~~~  467 (706)
                      ||++++
T Consensus       114 ME~L~~  119 (418)
T PLN02756        114 MRYLEP  119 (418)
T ss_pred             EeecCC
Confidence            999977

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.44  E-value=0.0015  Score=77.70  Aligned_cols=162  Identities=14%  Similarity=-0.021  Sum_probs=114.7

Q ss_pred             HHHHHHHHHHhhcCCcceeeeEeEEEe--CCeeEEEEecCCCCChhhhhhcccc-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 005236          428 KELKNEIILFSKLQHRNLVKLLGCCIH--GEEKLLIYEFMPNKSLDSFIFDQER-CKLLDWSKRFHIICGTARGLLYLHQ  504 (706)
Q Consensus       428 ~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~  504 (706)
                      +....|....+...|+++.....-...  ..+.+.+++|+..|.+.+.|-.... ...++...+...-.+......-.|.
T Consensus      1274 emll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1274 EMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred             HhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence            344556666677789998776554432  3466899999999999998865432 2333333333333332555555554


Q ss_pred             CC--CCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHH
Q 005236          505 DS--RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLL  582 (706)
Q Consensus       505 ~~--~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~  582 (706)
                      ..  ....+|+++|+-|.+|..+..+|+.++|+.+......  .......+++-|++|+....-.++.++|+|..|+.+|
T Consensus      1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~--sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly 1431 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVL--SFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLY 1431 (2724)
T ss_pred             cccCCccchhhhhhhhccceecCCcccccccccccccCchH--hhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            32  2347999999999999999999999999998432221  1222356788899999998889999999999999999


Q ss_pred             HHHhCCCCC
Q 005236          583 EIVSGKKNR  591 (706)
Q Consensus       583 elltG~~p~  591 (706)
                      +.--|..++
T Consensus      1432 ~rs~~n~~f 1440 (2724)
T KOG1826|consen 1432 LRSDGNAYF 1440 (2724)
T ss_pred             HHhcccHHH
Confidence            998887764

>PRK12396 5-methylribose kinase; Reviewed

Probab=96.41  E-value=0.01  Score=62.88  Aligned_cols=74  Identities=12%  Similarity=0.129  Sum_probs=51.3

Q ss_pred             cceeccCCceeEEEEEeCC-CcEEEEEEcCc------cchhhHHHHHHHHHHHhhcC--Ccc-eeeeEeEEEeCCeeEEE
Q 005236          392 NKKLGEGGFGPVYKGTLAD-EQEIAVKRLSK------ISEQGLKELKNEIILFSKLQ--HRN-LVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~------~~~~~~~~~~~E~~~l~~l~--h~n-iv~l~~~~~~~~~~~lV  461 (706)
                      .+.||.|.-..||++.+.. ++.|+||.-..      ..+-..++..-|.+.|+...  -|. +++++.+  +.+...+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence            4789999999999999843 56799986421      22445667777888877663  343 4555544  55667789


Q ss_pred             EecCCC
Q 005236          462 YEFMPN  467 (706)
Q Consensus       462 ~e~~~~  467 (706)
                      ||+++.
T Consensus       112 MEdL~~  117 (409)
T PRK12396        112 MEDLSD  117 (409)
T ss_pred             HHhCcc
Confidence            999864

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.25  E-value=0.029  Score=59.17  Aligned_cols=141  Identities=17%  Similarity=0.243  Sum_probs=80.6

Q ss_pred             ceeccCCceeEEEEEeCC----CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcce-eeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD----EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL-VKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      +.|..|-...+|+....+    +..|++|......... -.-.+|..+++.+..-++ .++++++. ..   +|.+|+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~-IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYV-IDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeE-echHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcC
Confidence            455557778899887543    2378888875533322 223568888888865555 35565552 22   58999988


Q ss_pred             CChhhh-------h----------hcccc---cCCCCHHHHHHHHHHH----------------------HH---HHHHH
Q 005236          468 KSLDSF-------I----------FDQER---CKLLDWSKRFHIICGT----------------------AR---GLLYL  502 (706)
Q Consensus       468 gsL~~~-------l----------~~~~~---~~~l~~~~~~~i~~~i----------------------a~---~l~~L  502 (706)
                      .+|..-       +          |....   ....-|..+.++..++                      .+   .+..+
T Consensus        95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  174 (330)
T PLN02421         95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI  174 (330)
T ss_pred             CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence            776321       1          11110   0011233322222221                      11   11111


Q ss_pred             H-h-CCCCceEecccCCCcEEEcC-CCCeEEeeeccccc
Q 005236          503 H-Q-DSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARA  538 (706)
Q Consensus       503 H-~-~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgla~~  538 (706)
                      . . ..+..+.|.|+.+.|||+++ ++.++++||..|-.
T Consensus       175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            1 1 12345899999999999975 57899999998854

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=96.12  E-value=0.031  Score=57.74  Aligned_cols=140  Identities=22%  Similarity=0.233  Sum_probs=93.1

Q ss_pred             ccceeccCCceeEEEEEeCCCcEEEEEEcCcc-----ch--------------------hhHH-HHHHHHHHHhhcCCcc
Q 005236          391 INKKLGEGGFGPVYKGTLADEQEIAVKRLSKI-----SE--------------------QGLK-ELKNEIILFSKLQHRN  444 (706)
Q Consensus       391 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-----~~--------------------~~~~-~~~~E~~~l~~l~h~n  444 (706)
                      +.-.|..|--+.||.++..+|..+|||+.+..     ..                    .-.+ -...|++-|.+|+...
T Consensus       148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG  227 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG  227 (520)
T ss_pred             cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            44678899999999999999999999986421     00                    0011 1345777777776554


Q ss_pred             eeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC
Q 005236          445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ  524 (706)
Q Consensus       445 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~  524 (706)
                      |.----...  ....|||+|+....-..   ..-+--.++...+..+-.|++.-|.-|-..+  .+||.||.--|+|+ .
T Consensus       228 IP~PePIlL--k~hVLVM~FlGrdgw~a---PkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Ly-h  299 (520)
T KOG2270|consen  228 IPCPEPILL--KNHVLVMEFLGRDGWAA---PKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLY-H  299 (520)
T ss_pred             CCCCCceee--ecceEeeeeccCCCCcC---cccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheE-E
Confidence            432111111  12368999996432211   1111123556677777788888888888877  49999999999998 4


Q ss_pred             CCCeEEeeeccccc
Q 005236          525 DMNPKISDFGLARA  538 (706)
Q Consensus       525 ~~~~kl~Dfgla~~  538 (706)
                      +|.+.|+|-+.+..
T Consensus       300 dG~lyiIDVSQSVE  313 (520)
T KOG2270|consen  300 DGKLYIIDVSQSVE  313 (520)
T ss_pred             CCEEEEEEcccccc
Confidence            57899999887654

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.01  E-value=0.012  Score=57.79  Aligned_cols=31  Identities=35%  Similarity=0.543  Sum_probs=22.3

Q ss_pred             CceEecccCCCcEEE-cCCCCeEEeeeccccc
Q 005236          508 LRIIHRDLKASNVLL-DQDMNPKISDFGLARA  538 (706)
Q Consensus       508 ~~ivH~Dikp~Nill-~~~~~~kl~Dfgla~~  538 (706)
                      ..+.|.|+.|.|||+ +.++.++|+||..|..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            458999999999999 8999999999998864

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=95.87  E-value=0.029  Score=49.20  Aligned_cols=37  Identities=19%  Similarity=0.234  Sum_probs=22.0

Q ss_pred             cCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCC
Q 005236           61 WKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGP   98 (706)
Q Consensus        61 w~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~   98 (706)
                      |.|....+.+.+.+.|+++|+..++--+ +.+.|.|..
T Consensus        78 W~S~~~~~~~~~~~~L~ddGnlvl~~~~-~~~~W~Sf~  114 (116)
T cd00028          78 WSSNTTRVNGNYVLVLLDDGNLVLYDSD-GNFLWQSFD  114 (116)
T ss_pred             EEecccCCCCceEEEEeCCCCEEEECCC-CCEEEcCCC
Confidence            4444433456778888888875544322 456776653

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=95.80  E-value=0.037  Score=53.16  Aligned_cols=139  Identities=14%  Similarity=0.141  Sum_probs=88.5

Q ss_pred             EEEEEEcCccchh-hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHH
Q 005236          413 EIAVKRLSKISEQ-GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI  491 (706)
Q Consensus       413 ~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i  491 (706)
                      ...+|++....-. ...-+..+..++++++  .|++|..-  .....-++.|+|..-..            ..    ..+
T Consensus        87 ~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i------------~~----~N~  146 (308)
T PF07387_consen   87 PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI------------NF----SNF  146 (308)
T ss_pred             hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc------------ch----hHH
Confidence            4567776554433 4456788888988875  57777632  34455688998833111            11    112


Q ss_pred             HHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcc
Q 005236          492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVK  571 (706)
Q Consensus       492 ~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~  571 (706)
                      +..=+++|.-.|+.+ ...+|+|-.|+||+-|..|.+||.|-+..-.              .+..|.--   .....|++
T Consensus       147 i~agi~~L~~fH~~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~--------------~~V~~vN~---~Y~~lT~~  208 (308)
T PF07387_consen  147 ITAGIKDLMDFHSEN-QHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE--------------NQVNMVNI---EYESLTQE  208 (308)
T ss_pred             HHHhHHHHHHhhccC-CCeecCCCChhheeecCCCCEEecChhhhhh--------------heeeEEee---eccccChH
Confidence            222256788888553 3699999999999999999999999664321              11122221   12345778


Q ss_pred             hhhHHHHHHHHHHHhCCC
Q 005236          572 SDVFSFGILLLEIVSGKK  589 (706)
Q Consensus       572 sDv~SlGvil~elltG~~  589 (706)
                      +.+=+|=.-++++.....
T Consensus       209 aE~~~fv~s~l~~v~~~~  226 (308)
T PF07387_consen  209 AEVKVFVKSCLKLVEKQR  226 (308)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            888888888888876543

The function of this family is unknown.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.74  E-value=0.12  Score=54.12  Aligned_cols=30  Identities=23%  Similarity=0.333  Sum_probs=25.9

Q ss_pred             CceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          508 LRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       508 ~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ..++|+|+++.||+++. +.+.|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            46899999999999988 6789999997653

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	706
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		9e-52
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-50
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-39
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-39
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-37
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		4e-37
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		4e-37
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-35
3a4o_X	286	Lyn Kinase Domain Length = 286		8e-23
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		8e-23
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		9e-23
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-22
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		2e-22
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		3e-22
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		3e-22
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-22
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		5e-22
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		5e-22
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		5e-22
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		5e-22
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-22
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-22
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		6e-22
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		7e-22
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		7e-22
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		7e-22
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		7e-22
2pl0_A	289	Lck Bound To Imatinib Length = 289		8e-22
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		8e-22
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		9e-22
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-21
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-21
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-21
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		4e-21
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		4e-21
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		5e-21
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		6e-21
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		8e-21
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		8e-21
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		8e-21
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-20
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-20
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-20
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-20
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-20
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-20
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-20
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-20
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-20
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		2e-20
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-20
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-20
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-20
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-20
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-20
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-20
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-20
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-20
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-20
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-20
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-20
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-20
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		3e-20
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-20
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-20
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		3e-20
4h58_A	275	Braf In Complex With Compound 3 Length = 275		3e-20
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		3e-20
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		4e-20
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		4e-20
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-20
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		4e-20
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		4e-20
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		4e-20
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		4e-20
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		4e-20
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		4e-20
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		4e-20
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		4e-20
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		5e-20
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		5e-20
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		5e-20
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-20
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-20
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-20
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-20
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-20
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		5e-20
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		5e-20
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		5e-20
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		5e-20
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		6e-20
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		6e-20
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		6e-20
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		6e-20
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		6e-20
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		6e-20
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		6e-20
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		6e-20
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		6e-20
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		7e-20
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		7e-20
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		8e-20
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-20
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		8e-20
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		9e-20
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		9e-20
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		9e-20
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		9e-20
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-20
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		9e-20
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-20
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		9e-20
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		1e-19
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-19
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		1e-19
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		1e-19
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		1e-19
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		1e-19
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		1e-19
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-19
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-19
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-19
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-19
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-19
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-19
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-19
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		2e-19
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-19
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-19
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-19
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-19
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-19
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		2e-19
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-19
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-19
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-19
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-19
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-19
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-19
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-19
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-19
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-19
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-19
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		3e-19
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		3e-19
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		3e-19
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		4e-19
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-19
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		6e-19
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		6e-19
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-19
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		9e-19
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		9e-19
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-18
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-18
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-18
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-18
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-18
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-18
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-18
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-18
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-18
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-18
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-18
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-18
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-18
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-18
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-18
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-18
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-18
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-18
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		3e-18
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		3e-18
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		3e-18
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		3e-18
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-18
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		3e-18
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-18
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-18
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-18
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		4e-18
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		5e-18
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		5e-18
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		5e-18
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		5e-18
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		6e-18
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		6e-18
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		6e-18
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		7e-18
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		7e-18
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-18
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-18
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-17
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-17
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-17
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-17
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		1e-17
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-17
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-17
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-17
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-17
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-17
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-17
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-17
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-17
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-17
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-17
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		2e-17
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-17
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-17
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-17
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-17
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-17
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-17
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-17
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-17
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		2e-17
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-17
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-17
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-17
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-17
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-17
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-17
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-17
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-17
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-17
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-17
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-17
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-17
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-17
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-17
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		3e-17
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-17
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		3e-17
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-17
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-17
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-17
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		3e-17
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-17
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		3e-17
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		3e-17
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		3e-17
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-17
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		3e-17
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-17
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		3e-17
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		3e-17
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		3e-17
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		3e-17
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-17
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-17
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-17
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		3e-17
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		3e-17
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		3e-17
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-17
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		3e-17
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-17
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-17
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-17
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-17
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		4e-17
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		4e-17
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		4e-17
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		4e-17
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-17
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		4e-17
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-17
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		5e-17
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-17
1fvr_A	327	Tie2 Kinase Domain Length = 327		5e-17
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-17
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		5e-17
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-17
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		5e-17
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		5e-17
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		5e-17
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-17
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		5e-17
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		5e-17
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		6e-17
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		6e-17
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		6e-17
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		6e-17
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		6e-17
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		6e-17
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		6e-17
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		6e-17
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		6e-17
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-17
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		6e-17
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		6e-17
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		6e-17
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		6e-17
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-17
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		7e-17
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		7e-17
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		7e-17
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		7e-17
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		7e-17
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		8e-17
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		8e-17
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		8e-17
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		9e-17
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		9e-17
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		9e-17
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-16
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		1e-16
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-16
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-16
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-16
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-16
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-16
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		1e-16
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-16
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		1e-16
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-16
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-16
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-16
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-16
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		1e-16
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-16
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-16
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-16
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-16
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-16
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		1e-16
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-16
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-16
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-16
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-16
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-16
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-16
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-16
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-16
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-16
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		2e-16
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		2e-16
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-16
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-16
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		2e-16
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-16
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-16
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-16
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-16
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-16
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-16
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		2e-16
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-16
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		2e-16
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-16
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		2e-16
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-16
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		2e-16
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		2e-16
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-16
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		2e-16
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-16
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-16
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		3e-16
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		3e-16
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-16
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-16
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		3e-16
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-16
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		3e-16
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-16
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-16
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		3e-16
4fie_A	423	Full-Length Human Pak4 Length = 423		4e-16
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		4e-16
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		4e-16
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-16
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-16
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		5e-16
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		5e-16
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		5e-16
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-16
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		5e-16
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		5e-16
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		5e-16
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		5e-16
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-16
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		5e-16
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		5e-16
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		5e-16
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		6e-16
3a7f_A	303	Human Mst3 Kinase Length = 303		6e-16
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		6e-16
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		6e-16
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		6e-16
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-16
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		6e-16
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		6e-16
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-16
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		6e-16
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		6e-16
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		6e-16
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		6e-16
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		7e-16
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		7e-16
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		8e-16
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		8e-16
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		9e-16
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		9e-16
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-15
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-15
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-15
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-15
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-15
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-15
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-15
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-15
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		2e-15
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-15
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-15
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-15
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-15
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		3e-15
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-15
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-15
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		4e-15
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		5e-15
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		6e-15
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		6e-15
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-15
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		6e-15
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		6e-15
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		6e-15
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		6e-15
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		6e-15
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		7e-15
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		7e-15
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		7e-15
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-15
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		7e-15
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		7e-15
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		8e-15
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		8e-15
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		8e-15
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		8e-15
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		8e-15
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		8e-15
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		9e-15
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		9e-15
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		9e-15
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		9e-15
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		9e-15
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		9e-15
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		9e-15
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		9e-15
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		9e-15
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		9e-15
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		9e-15
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-14
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-14
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-14
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		1e-14
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-14
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-14
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-14
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-14
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-14
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-14
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-14
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		2e-14
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-14
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-14
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-14
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-14
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-14
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-14
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		3e-14
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		3e-14
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		3e-14
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-14
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-14
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-14
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-14
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-14
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		3e-14
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-14
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-14
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-14
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		3e-14
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		4e-14
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		4e-14
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		4e-14
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		4e-14
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		4e-14
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-14
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		4e-14
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		4e-14
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		5e-14
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		5e-14
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		5e-14
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		5e-14
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		6e-14
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		6e-14
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		6e-14
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		7e-14
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		7e-14
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		7e-14
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		7e-14
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		7e-14
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		7e-14
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		8e-14
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		9e-14
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-13
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-13
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		1e-13
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-13
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-13
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		1e-13
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-13
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		2e-13
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-13
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		2e-13
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-13
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-13
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		3e-13
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		3e-13
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		3e-13
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		3e-13
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		3e-13
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		3e-13
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		3e-13
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-13
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		3e-13
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		3e-13
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		3e-13
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		4e-13
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		4e-13
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		4e-13
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		4e-13
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		4e-13
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		5e-13
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		5e-13
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		5e-13
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		5e-13
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		5e-13
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		6e-13
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		6e-13
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		6e-13
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-13
4fl3_A	635	Structural And Biophysical Characterization Of The		6e-13
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		6e-13
4fl2_A	636	Structural And Biophysical Characterization Of The		6e-13
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		7e-13
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		7e-13
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		7e-13
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-13
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		7e-13
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		8e-13
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		9e-13
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		9e-13
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-12
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-12
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-12
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		1e-12
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		1e-12
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		1e-12
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-12
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		1e-12
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		1e-12
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-12
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		1e-12
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		1e-12
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		1e-12
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		1e-12
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		1e-12
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		1e-12
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-12
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-12
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-12
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-12
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		2e-12
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-12
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		2e-12
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-12
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-12
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-12
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-12
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-12
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-12
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-12
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-12
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-12
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-12
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-12
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-12
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-12
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		3e-12
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		3e-12
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		4e-12
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		4e-12
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		4e-12
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		4e-12
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		4e-12
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		4e-12
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		4e-12
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		4e-12
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		5e-12
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		6e-12
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-12
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		6e-12
3kk8_A	284	Camkii Substrate Complex A Length = 284		6e-12
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		6e-12
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		7e-12
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		7e-12
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		7e-12
3kk9_A	282	Camkii Substrate Complex B Length = 282		7e-12
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		8e-12
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		8e-12
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		8e-12
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		8e-12
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		8e-12
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		8e-12
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		9e-12
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		9e-12
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		9e-12
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		9e-12
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		9e-12
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		9e-12
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		9e-12
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-11
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-11
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-11
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		1e-11
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-11
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-11
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-11
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		1e-11
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-11
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-11
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-11
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-11
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-11
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-11
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-11
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-11
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-11
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-11
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		1e-11
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-11
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-11
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-11
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-11
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-11
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-11
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-11
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-11
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-11
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-11
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-11
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-11
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-11
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-11
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-11
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-11
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-11
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-11
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-11
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-11
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-11
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-11
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-11
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-11
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-11
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-11
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-11
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-11
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-11
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-11
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-11
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-11
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-11
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-11
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-11
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-11
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-11
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-11
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-11
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-11
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-11
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-11
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-11
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-11
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		3e-11
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-11
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-11
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-11
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		3e-11
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-11
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-11
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-11
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		3e-11
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-11
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-11
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-11
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		3e-11
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-11
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-11
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		3e-11
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-11
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		3e-11
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		3e-11
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		3e-11
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		3e-11
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		3e-11
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		3e-11
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		3e-11
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		3e-11
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		3e-11
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-11
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-11
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-11
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-11
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-11
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		3e-11
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-11
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		4e-11
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-11
4exu_A	371	Mapk13, Inactive Form Length = 371		5e-11
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		6e-11
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		6e-11
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		6e-11
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-11
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		6e-11
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		7e-11
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		7e-11
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		7e-11
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		7e-11
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		7e-11
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-10
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-10
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		1e-10
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		1e-10
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-10
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		1e-10
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-10
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-10
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		1e-10
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		2e-10
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-10
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-10
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-10
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-10
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-10
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-10
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-10
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-10
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-10
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		2e-10
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-10
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-10
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		2e-10
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-10
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-10
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-10
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-10
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-10
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-10
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-10
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-10
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-10
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-10
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		3e-10
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		3e-10
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-10
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		3e-10
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-10
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-10
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-10
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-10
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		4e-10
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		4e-10
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		4e-10
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-10
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-10
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-10
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		5e-10
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		5e-10
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		5e-10
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		5e-10
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		6e-10
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		6e-10
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		6e-10
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-10
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		7e-10
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		7e-10
3soa_A	444	Full-Length Human Camkii Length = 444		7e-10
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		8e-10
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		8e-10
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		9e-10
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-09
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-09
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-09
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		1e-09
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-09
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		1e-09
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		1e-09
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		1e-09
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-09
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		1e-09
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		1e-09
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-09
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-09
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-09
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		2e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-09
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-09
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-09
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		2e-09
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-09
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-09
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-09
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		2e-09
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-09
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		2e-09
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-09
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-09
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-09
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		3e-09
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		3e-09
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-09
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		4e-09
4ae9_A	343	Structure And Function Of The Human Sperm-specific		4e-09
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-09
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		4e-09
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		5e-09
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		5e-09
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		5e-09
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		5e-09
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-09
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		5e-09
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		5e-09
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		5e-09
4ae6_A	343	Structure And Function Of The Human Sperm-specific		6e-09
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-09
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		6e-09
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		6e-09
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		6e-09
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		6e-09
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		6e-09
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-09
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		6e-09
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		6e-09
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		7e-09
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		7e-09
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		7e-09
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		8e-09
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		8e-09
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		8e-09
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		8e-09
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		9e-09
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		9e-09
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		9e-09
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		9e-09
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		9e-09
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		9e-09
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		9e-09
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		1e-08
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		1e-08
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-08
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		1e-08
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		1e-08
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		1e-08
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		1e-08
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-08
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-08
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-08
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-08
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-08
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-08
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-08
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-08
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-08
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-08
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-08
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-08
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-08
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-08
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		3e-08
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-08
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		3e-08
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		3e-08
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		3e-08
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-08
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-08
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		4e-08
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		4e-08
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-08
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-08
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		4e-08
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		5e-08
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-08
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-08
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		5e-08
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		5e-08
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		5e-08
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		5e-08
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		5e-08
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		5e-08
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		5e-08
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		5e-08
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		5e-08
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		5e-08
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		5e-08
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		5e-08
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		6e-08
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		6e-08
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		6e-08
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		6e-08
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		6e-08
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		6e-08
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		6e-08
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		6e-08
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		6e-08
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		6e-08
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		7e-08
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		7e-08
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		7e-08
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		7e-08
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		7e-08
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		7e-08
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		7e-08
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		7e-08
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		7e-08
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		7e-08
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		8e-08
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		8e-08
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		8e-08
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		8e-08
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		8e-08
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		9e-08
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		9e-08
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		9e-08
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		9e-08
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-07
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-07
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-07
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-07
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-07
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-07
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-07
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-07
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		2e-07
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		2e-07
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-07
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-07
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-07
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		2e-07
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		2e-07
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-07
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		2e-07
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-07
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-07
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		2e-07
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-07
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-07
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-07
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-07
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-07
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-07
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-07
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		2e-07
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-07
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-07
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-07
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-07
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-07
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-07
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-07
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		2e-07
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-07
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		2e-07
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-07
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-07
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		3e-07
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-07
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		3e-07
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		3e-07
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		4e-07
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		4e-07
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-07
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		5e-07
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		6e-07
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		7e-07
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		1e-06
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		1e-06
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		1e-06
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		1e-06
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		1e-06
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		2e-06
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		2e-06
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		2e-06
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-06

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  201 bits (512), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 176/302 (58%), Gaps = 8/302 (2%)
Query: 365 NEDQNIDL-DLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS 423
            ED  + L  L  F L  +  A+DNFS    LG GGFG VYKG LAD   +AVKRL +  
Sbjct: 15  EEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEER 74
Query: 424 EQGLK-ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ-ERCK 481
            QG + + + E+ + S   HRNL++L G C+   E+LL+Y +M N S+ S + ++ E   
Sbjct: 75  XQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 134
Query: 482 LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
            LDW KR  I  G+ARGL YLH     +IIHRD+KA+N+LLD++    + DFGLA+    
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-- 192
Query: 542 DETEGNTNRVV-GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKK--NRGFYHSDN 598
           D  + +    V GT G++APEY S G+ S K+DVF +G++LLE+++G++  +     +D+
Sbjct: 193 DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 252
Query: 599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL 658
            + L+     L  E     L+D   + ++   EV + I + LLC Q  P +RP M  V+ 
Sbjct: 253 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 312
Query: 659 ML 660
           ML
Sbjct: 313 ML 314

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  197 bits (502), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/302 (39%), Positives = 174/302 (57%), Gaps = 8/302 (2%)
Query: 365 NEDQNIDL-DLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS 423
            ED  + L  L  F L  +  A+DNF     LG GGFG VYKG LAD   +AVKRL +  
Sbjct: 7   EEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEER 66
Query: 424 EQGLK-ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ-ERCK 481
            QG + + + E+ + S   HRNL++L G C+   E+LL+Y +M N S+ S + ++ E   
Sbjct: 67  TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 482 LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
            LDW KR  I  G+ARGL YLH     +IIHRD+KA+N+LLD++    + DFGLA+    
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-- 184
Query: 542 DETEGNTNRVV-GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKK--NRGFYHSDN 598
           D  + +    V G  G++APEY S G+ S K+DVF +G++LLE+++G++  +     +D+
Sbjct: 185 DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244
Query: 599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL 658
            + L+     L  E     L+D   + ++   EV + I + LLC Q  P +RP M  V+ 
Sbjct: 245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304
Query: 659 ML 660
           ML
Sbjct: 305 ML 306

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 154/281 (54%), Gaps = 6/281 (2%)
Query: 379 LATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFS 438
           L  +  AT+NF     +G G FG VYKG L D  ++A+KR +  S QG++E + EI   S
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 439 KLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL-LDWSKRFHIICGTAR 497
             +H +LV L+G C    E +LIY++M N +L   ++  +   + + W +R  I  G AR
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV-GTYG 556
           GL YLH  +   IIHRD+K+ N+LLD++  PKI+DFG+++  G +  + +   VV GT G
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK-GTELDQTHLXXVVKGTLG 206
Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           Y+ PEY   G+ + KSDV+SFG++L E++  +           +NL   A +  N G   
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
           Q++D    D      + +     + C+    EDRP M  V+
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 154/281 (54%), Gaps = 6/281 (2%)
Query: 379 LATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFS 438
           L  +  AT+NF     +G G FG VYKG L D  ++A+KR +  S QG++E + EI   S
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 439 KLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL-LDWSKRFHIICGTAR 497
             +H +LV L+G C    E +LIY++M N +L   ++  +   + + W +R  I  G AR
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV-GTYG 556
           GL YLH  +   IIHRD+K+ N+LLD++  PKI+DFG+++  G +  + +   VV GT G
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK-GTELGQTHLXXVVKGTLG 206
Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           Y+ PEY   G+ + KSDV+SFG++L E++  +           +NL   A +  N G   
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
           Q++D    D      + +     + C+    EDRP M  V+
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  154 bits (388), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/219 (42%), Positives = 132/219 (60%), Gaps = 12/219 (5%)
Query: 376 LFELATIANATDNFSIN---KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKN 432
            +EL  + N  D   I+    K+GEGGFG VYKG + +   +AVK+L+ + +   +ELK 
Sbjct: 17  FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 75
Query: 433 ----EIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
               EI + +K QH NLV+LLG    G++  L+Y +MPN SL   +   +    L W  R
Sbjct: 76  QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 135
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
             I  G A G+ +LH++     IHRD+K++N+LLD+    KISDFGLARA          
Sbjct: 136 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +R+VGT  YMAPE A  G+ + KSD++SFG++LLEI++G
Sbjct: 193 SRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  153 bits (386), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/219 (42%), Positives = 131/219 (59%), Gaps = 12/219 (5%)
Query: 376 LFELATIANATDNFSIN---KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKN 432
            +EL  + N  D   I+    K+GEGGFG VYKG + +   +AVK+L+ + +   +ELK 
Sbjct: 11  FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 69
Query: 433 ----EIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
               EI + +K QH NLV+LLG    G++  L+Y +MPN SL   +   +    L W  R
Sbjct: 70  QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 129
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
             I  G A G+ +LH++     IHRD+K++N+LLD+    KISDFGLARA          
Sbjct: 130 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMX 186
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            R+VGT  YMAPE A  G+ + KSD++SFG++LLEI++G
Sbjct: 187 XRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  153 bits (386), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/219 (42%), Positives = 131/219 (59%), Gaps = 12/219 (5%)
Query: 376 LFELATIANATDNFSIN---KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKN 432
            +EL  + N  D   I+    K+GEGGFG VYKG + +   +AVK+L+ + +   +ELK 
Sbjct: 17  FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 75
Query: 433 ----EIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
               EI + +K QH NLV+LLG    G++  L+Y +MPN SL   +   +    L W  R
Sbjct: 76  QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMR 135
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
             I  G A G+ +LH++     IHRD+K++N+LLD+    KISDFGLARA          
Sbjct: 136 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            R+VGT  YMAPE A  G+ + KSD++SFG++LLEI++G
Sbjct: 193 XRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 129/219 (58%), Gaps = 12/219 (5%)
Query: 376 LFELATIANATDNFSIN---KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKN 432
            +EL  + N  D   I+    K GEGGFG VYKG + +   +AVK+L+ + +   +ELK 
Sbjct: 8   FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQ 66
Query: 433 ----EIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
               EI + +K QH NLV+LLG    G++  L+Y + PN SL   +   +    L W  R
Sbjct: 67  QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXR 126
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
             I  G A G+ +LH++     IHRD+K++N+LLD+    KISDFGLARA          
Sbjct: 127 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX 183
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +R+VGT  Y APE A  G+ + KSD++SFG++LLEI++G
Sbjct: 184 SRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score =  105 bits (262), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 102/200 (51%), Gaps = 6/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  + K+LG G FG V+ G   +  ++AVK L K     ++    E  L   LQH  LV
Sbjct: 13  ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 71
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M   SL  F+   E  K+L   K        A G+ Y+    
Sbjct: 72  RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE--- 127
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R   IHRDL+A+NVL+ + +  KI+DFGLAR    +E             + APE  + G
Sbjct: 128 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFG 186
Query: 567 QFSVKSDVFSFGILLLEIVS 586
            F++KSDV+SFGILL EIV+
Sbjct: 187 CFTIKSDVWSFGILLYEIVT 206

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score =  105 bits (262), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 6/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  + KKLG G FG V+ G   +  ++AVK L K     ++    E  L   LQH  LV
Sbjct: 12  ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLV 70
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I EFM   SL  F+   E  K+L   K        A G+ Y+    
Sbjct: 71  RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE--- 126
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R   IHRDL+A+NVL+ + +  KI+DFGLAR    +E             + APE  + G
Sbjct: 127 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFG 185
Query: 567 QFSVKSDVFSFGILLLEIVS 586
            F++KS+V+SFGILL EIV+
Sbjct: 186 CFTIKSNVWSFGILLYEIVT 205

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score =  105 bits (262), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 25/214 (11%)
Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISE--QGLKELKNEIILFSKLQHRNL 445
            ++ + +G GGFG VY+   + DE  +   R     +  Q ++ ++ E  LF+ L+H N+
Sbjct: 9   LTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDWSKRFHIICGTARGLLYL 502
           + L G C+      L+ EF     L+  +   +R     L++W+ +       ARG+ YL
Sbjct: 69  IALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVNWAVQI------ARGMNYL 121
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNP--------KISDFGLARAFGGDETEGNTNRVVGT 554
           H ++ + IIHRDLK+SN+L+ Q +          KI+DFGLAR +             G 
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRTTKMSAAGA 177
Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           Y +MAPE      FS  SDV+S+G+LL E+++G+
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 130/271 (47%), Gaps = 32/271 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  + KKLG G FG V+  T     ++AVK + K     ++    E  +   LQH  LV
Sbjct: 15  ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK-----LLDWSKRFHIICGTARGLLY 501
           KL    +  E   +I EFM   SL  F+   E  K     L+D+S +       A G+ +
Sbjct: 74  KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAF 126
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           + Q +    IHRDL+A+N+L+   +  KI+DFGLAR    +E             + APE
Sbjct: 127 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPE 182
Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
             + G F++KSDV+SFGILL+EIV+    R  Y   +   +IR   + +    P    + 
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIVT--YGRIPYPGMSNPEVIRALERGYRMPRP----EN 236
Query: 622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC 652
           C ++ +N         I + C +  PE+RP 
Sbjct: 237 CPEELYN---------IMMRCWKNRPEERPT 258

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 133/273 (48%), Gaps = 36/273 (13%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  + KKLG G FG V+  T     ++AVK + K     ++    E  +   LQH  LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK-----LLDWSKRFHIICGTARGLLY 501
           KL    +  E   +I EFM   SL  F+   E  K     L+D+S +       A G+ +
Sbjct: 247 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAF 299
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMA 559
           + Q +    IHRDL+A+N+L+   +  KI+DFGLAR    +E    T R    +   + A
Sbjct: 300 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY---TAREGAKFPIKWTA 353
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           PE  + G F++KSDV+SFGILL+EIV+    R  Y   +   +IR   + +    P    
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVT--YGRIPYPGMSNPEVIRALERGYRMPRP---- 407
Query: 620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + C ++ +N         I + C +  PE+RP 
Sbjct: 408 ENCPEELYN---------IMMRCWKNRPEERPT 431

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 109/218 (50%), Gaps = 24/218 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKGT---LADEQ---EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +N    K LG G FG V + T   L  E    ++AVK L   +    KE L +E+ + S 
Sbjct: 38  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-------FDQERCKLLDWSKRFHI 491
           L QH N+V LLG C HG   L+I E+     L +F+        D+E  + L+     H 
Sbjct: 98  LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNT 548
               A+G+ +L   +    IHRD+ A NVLL      KI DFGLAR    D     +GN 
Sbjct: 158 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              V    +MAPE   D  ++V+SDV+S+GILL EI S
Sbjct: 215 RLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 109/218 (50%), Gaps = 24/218 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKGT---LADEQ---EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +N    K LG G FG V + T   L  E    ++AVK L   +    KE L +E+ + S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-------FDQERCKLLDWSKRFHI 491
           L QH N+V LLG C HG   L+I E+     L +F+        D+E  + L+     H 
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNT 548
               A+G+ +L   +    IHRD+ A NVLL      KI DFGLAR    D     +GN 
Sbjct: 166 SSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              V    +MAPE   D  ++V+SDV+S+GILL EI S
Sbjct: 223 RLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 129
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYG 185
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 186 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 239
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 240 YQLMR---------LCWKERPEDRPT 256

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 19  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 77
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 78  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 135
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 136 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYG 191
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 192 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 245
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 246 YQLMR---------LCWKERPEDRPT 262

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 15  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 73
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 74  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 132 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYG 187
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 188 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 241
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 242 YQLMR---------LCWKERPEDRPT 258

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 21  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 79
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 80  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 137
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 138 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYG 193
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 194 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 247
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 248 YQLMR---------LCWKERPEDRPT 264

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 22  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 80
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 81  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 138
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 139 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYG 194
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 195 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 248
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 249 YQLMR---------LCWKERPEDRPT 265

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 129
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYG 185
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 186 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 239
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 240 YQLMR---------LCWKERPEDRPT 256

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 14  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 72
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 73  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 130
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 131 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYG 186
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 187 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 240
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 241 YQLMR---------LCWKERPEDRPT 257

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 143/291 (49%), Gaps = 29/291 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  + K+LG G FG V+ GT     ++A+K L K      +    E  +  KL+H  LV
Sbjct: 9   ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLV 67
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+ D E  + L       +    A G+ Y+    
Sbjct: 68  QLY-AVVSEEPIYIVTEYMNKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIE--- 122
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYAS 564
           R+  IHRDL+++N+L+   +  KI+DFGLAR    +E    T R    +   + APE A 
Sbjct: 123 RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEX---TARQGAKFPIKWTAPEAAL 179
Query: 565 DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK 624
            G+F++KSDV+SFGILL E+V+  K R  Y   N   ++    + +   MP      C +
Sbjct: 180 YGRFTIKSDVWSFGILLTELVT--KGRVPYPGMNNREVLEQVERGYR--MP------CPQ 229
Query: 625 D-SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK-QPG 673
           D   +L E++  IH    C ++ PE+RP    +   L       +P+ QPG
Sbjct: 230 DCPISLHELM--IH----CWKKDPEERPTFEYLQSFLEDYFTATEPQYQPG 274

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 19  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 77
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 78  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 135
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 136 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYG 191
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 192 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 245
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 246 YQLMR---------LCWKERPEDRPT 262

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 129
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYG 185
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 186 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 239
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 240 YQLMR---------LCWKERPEDRPT 256

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 110/221 (49%), Gaps = 26/221 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKGT---LADEQ---EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +N    K LG G FG V + T   L  E    ++AVK L   +    KE L +E+ + S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           L QH N+V LLG C HG   L+I E+     L +F+  + + ++L+    F I   TA  
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTAST 163
Query: 499 LLYLHQDSRL----------RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TE 545
              LH  S++            IHRD+ A NVLL      KI DFGLAR    D     +
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           GN    V    +MAPE   D  ++V+SDV+S+GILL EI S
Sbjct: 224 GNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score =  102 bits (254), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 18  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 76
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 77  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 134
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 135 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYG 190
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 191 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 244
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 245 YQLMR---------LCWKERPEDRPT 261

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score =  102 bits (254), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 23  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 81
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 82  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 139
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 140 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYG 195
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 196 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 249
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 250 YQLMR---------LCWKERPEDRPT 266

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 8   ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 66
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 67  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN 124
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 125 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYG 180
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 181 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 234
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 235 YQLMR---------LCWKERPEDRPT 251

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score =  102 bits (253), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 112/204 (54%), Gaps = 20/204 (9%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLV 446
           K LG G FG VYKG    E E     +A+K L++ +  +   E  +E ++ + + H +LV
Sbjct: 44  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTARGLLYL 502
           +LLG C+    +L + + MP+  L  ++ + +       LL+W  +       A+G++YL
Sbjct: 104 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 156
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +    R++HRDL A NVL+    + KI+DFGLAR   GDE E N +       +MA E 
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 563 ASDGQFSVKSDVFSFGILLLEIVS 586
               +F+ +SDV+S+G+ + E+++
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMT 237

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 19/229 (8%)
Query: 388 NFSINKKLGEGGFGPVYKG---TLADEQE---IAVKRLSKISEQGLKELKNEIILFSKLQ 441
           N  + ++LGEG FG V+      L  EQ+   +AVK L   S+   K+   E  L + LQ
Sbjct: 14  NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL----------LDWSKRFHI 491
           H ++VK  G C+ G+  ++++E+M +  L+ F+       +          L  S+  HI
Sbjct: 74  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G++YL   +    +HRDL   N L+ +++  KI DFG++R     +        
Sbjct: 134 AQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 190
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
           +    +M PE     +F+ +SDV+S G++L EI +  K   +  S+N++
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 112/204 (54%), Gaps = 20/204 (9%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLV 446
           K LG G FG VYKG    E E     +A+K L++ +  +   E  +E ++ + + H +LV
Sbjct: 21  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTARGLLYL 502
           +LLG C+    +L + + MP+  L  ++ + +       LL+W  +       A+G++YL
Sbjct: 81  RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 133
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +    R++HRDL A NVL+    + KI+DFGLAR   GDE E N +       +MA E 
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 563 ASDGQFSVKSDVFSFGILLLEIVS 586
               +F+ +SDV+S+G+ + E+++
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 9   ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 67
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 68  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN 125
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHR+L+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 126 ---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYG 181
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 182 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 235
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 236 YQLMR---------LCWKERPEDRPT 252

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 109/221 (49%), Gaps = 26/221 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKGT---LADEQ---EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +N    K LG G FG V + T   L  E    ++AVK L   +    KE L +E+ + S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           L QH N+V LLG C HG   L+I E+     L +F+  + + ++L+    F I   T   
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTLST 163
Query: 499 LLYLHQDSRL----------RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TE 545
              LH  S++            IHRD+ A NVLL      KI DFGLAR    D     +
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           GN    V    +MAPE   D  ++V+SDV+S+GILL EI S
Sbjct: 224 GNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 15/233 (6%)
Query: 371 DLDLPLFELATIANATD---------NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK 421
           D D+P  E      A D         + +I +K+G G FG V++       ++AVK L +
Sbjct: 12  DYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHG-SDVAVKILME 70
Query: 422 --ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQER 479
                + + E   E+ +  +L+H N+V  +G         ++ E++   SL   +     
Sbjct: 71  QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 480 CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 539
            + LD  +R  +    A+G+ YLH +    I+HR+LK+ N+L+D+    K+ DFGL+R  
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189
Query: 540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRG 592
               T  ++    GT  +MAPE   D   + KSDV+SFG++L E+ + ++  G
Sbjct: 190 AS--TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 42/271 (15%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  + KKLG G FG V+  T     ++AVK + K     ++    E  +   LQH  LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 240
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK-----LLDWSKRFHIICGTARGLLY 501
           KL    +  E   +I EFM   SL  F+   E  K     L+D+S +       A G+ +
Sbjct: 241 KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAF 293
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           + Q +    IHRDL+A+N+L+   +  KI+DFGLAR       +           + APE
Sbjct: 294 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK-----------WTAPE 339
Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
             + G F++KSDV+SFGILL+EIV+    R  Y   +   +IR   + +    P    + 
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVT--YGRIPYPGMSNPEVIRALERGYRMPRP----EN 393
Query: 622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC 652
           C ++ +N         I + C +  PE+RP 
Sbjct: 394 CPEELYN---------IMMRCWKNRPEERPT 415

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 15/233 (6%)
Query: 371 DLDLPLFELATIANATD---------NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK 421
           D D+P  E      A D         + +I +K+G G FG V++       ++AVK L +
Sbjct: 12  DYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHG-SDVAVKILME 70
Query: 422 --ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQER 479
                + + E   E+ +  +L+H N+V  +G         ++ E++   SL   +     
Sbjct: 71  QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 480 CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 539
            + LD  +R  +    A+G+ YLH +    I+HRDLK+ N+L+D+    K+ DFGL+R  
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK 189
Query: 540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRG 592
                   +    GT  +MAPE   D   + KSDV+SFG++L E+ + ++  G
Sbjct: 190 ASXFLX--SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 109/231 (47%), Gaps = 37/231 (16%)
Query: 387 DNFSINKKLGEGGFGPVYKGT---LADEQ---EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +N    K LG G FG V + T   L  E    ++AVK L   +    KE L +E+ + S 
Sbjct: 31  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI--------------------FDQE 478
           L QH N+V LLG C HG   L+I E+     L +F+                     D+E
Sbjct: 91  LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 479 RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
             + L+     H     A+G+ +L   +    IHRD+ A NVLL      KI DFGLAR 
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 539 FGGDE---TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              D     +GN    V    +MAPE   D  ++V+SDV+S+GILL EI S
Sbjct: 208 IMNDSNYIVKGNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 138/278 (49%), Gaps = 36/278 (12%)
Query: 391 INKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           ++ ++G G FG VYKG    +  + + ++   + +  +  +NE+ +  K +H N++  +G
Sbjct: 40  LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQER----CKLLDWSKRFHIICGTARGLLYLHQDS 506
                +   ++ ++    SL   +  QE      +L+D +++      TA+G+ YLH  +
Sbjct: 100 YMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ------TAQGMDYLHAKN 152
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLA----RAFGGDETEGNTNRVVGTYGYMAPEY 562
              IIHRD+K++N+ L + +  KI DFGLA    R  G  + E  T  V+    +MAPE 
Sbjct: 153 ---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL----WMAPEV 205
Query: 563 ---ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
                +  FS +SDV+S+GI+L E+++G+    + H +N+  +I    + +     S+L 
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTGE--LPYSHINNRDQIIFMVGRGYASPDLSKLY 263
Query: 620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
             C K    L            CV++  E+RP  P ++
Sbjct: 264 KNCPKAMKRLVAD---------CVKKVKEERPLFPQIL 292

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 125/266 (46%), Gaps = 22/266 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G  G V+ G      ++AVK L + S         E  L  +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++ + +
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 129
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR     E             + APE  + G
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPEAINYG 185
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+    R  Y       +I++  + +    P    D C ++ 
Sbjct: 186 TFTIKSDVWSFGILLTEIVT--HGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEEL 239
Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPC 652
           + L           LC ++ PEDRP 
Sbjct: 240 YQLMR---------LCWKERPEDRPT 256

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 8   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 67  QLYAV-VSEEPIXIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 121
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 122 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYG 180
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 181 RFTIKSDVWSFGILLTELTT 200

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 11  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 70  QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 124
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 125 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYG 183
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 184 RFTIKSDVWSFGILLTELTT 203

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 9   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 68  QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 122
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 123 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYG 181
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 182 RFTIKSDVWSFGILLTELTT 201

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 7   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 66  QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 120
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 121 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAALYG 179
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 180 RFTIKSDVWSFGILLTELTT 199

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 77  QLYAV-VSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYG 190
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 11/202 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 243 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 297
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYAS 564
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E    T R    +   + APE A 
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 354
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
            G+F++KSDV+SFGILL E+ +
Sbjct: 355 YGRFTIKSDVWSFGILLTELTT 376

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 11/202 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 243 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 297
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYAS 564
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E    T R    +   + APE A 
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 354
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
            G+F++KSDV+SFGILL E+ +
Sbjct: 355 YGRFTIKSDVWSFGILLTELTT 376

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 77  QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYG 190
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 77  QLYAV-VSEEPIYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYG 190
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 11/202 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 326 QLY-AVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 380
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYAS 564
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E    T R    +   + APE A 
Sbjct: 381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAAL 437
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
            G+F++KSDV+SFGILL E+ +
Sbjct: 438 YGRFTIKSDVWSFGILLTELTT 459

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 9/204 (4%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 25  QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
            +G      +  ++ ++    SL   +   E     +  K   I   TARG+ YLH  S 
Sbjct: 85  FMGYST-APQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE---YAS 564
             IIHRDLK++N+ L +D   KI DFGLA             ++ G+  +MAPE      
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 565 DGQFSVKSDVFSFGILLLEIVSGK 588
              +S +SDV++FGI+L E+++G+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ 222

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 35  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E+M N SLDSF+  ++        +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVG 151
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGLAR    D     T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLDWSKRFHIICGTARGLLYLH 503
            +G      +  ++ ++    SL   +       E  KL+D +++      TA+G+ YLH
Sbjct: 69  FMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY- 562
             S   IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE  
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 563 --ASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +S +SDV++FGI+L E+++G+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 77  QLYAV-VSEEPIYIVCEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYG 190
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 9/204 (4%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 13  QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 72
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
            +G      +  ++ ++    SL   +   E     +  K   I   TARG+ YLH  S 
Sbjct: 73  FMGYSTK-PQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKS- 128
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE---YAS 564
             IIHRDLK++N+ L +D   KI DFGLA             ++ G+  +MAPE      
Sbjct: 129 --IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 565 DGQFSVKSDVFSFGILLLEIVSGK 588
              +S +SDV++FGI+L E+++G+
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQ 210

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 8   AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +L     SK   
Sbjct: 68  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 128 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 238
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 239 ---MEGGLLDKPDNCPDMLLELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 283
Query: 671 QPGY 674
           +PG+
Sbjct: 284 EPGF 287

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 11/202 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 243 QLYAV-VSEEPIYIVGEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVE--- 297
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYAS 564
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E    T R    +   + APE A 
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAAL 354
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
            G+F++KSDV+SFGILL E+ +
Sbjct: 355 YGRFTIKSDVWSFGILLTELTT 376

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 17  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +L     SK   
Sbjct: 77  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 247
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 248 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 292
Query: 671 QPGY 674
           +PG+
Sbjct: 293 EPGF 296

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 15  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 74  QLYAV-VSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVE--- 128
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYG 187
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 188 RFTIKSDVWSFGILLTELTT 207

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 15  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 74  QLYAV-VSEEPIYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVE--- 128
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYG 187
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 188 RFTIKSDVWSFGILLTELTT 207

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 150/302 (49%), Gaps = 44/302 (14%)
Query: 373 DLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQG----- 426
           + P   L T+A+  +     K++G+GGFG V+KG L  D+  +A+K L     +G     
Sbjct: 7   EFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 427 --LKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD 484
              +E + E+ + S L H N+VKL G  +H   ++++ EF+P   L   + D  +   + 
Sbjct: 65  EKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRMVM-EFVPCGDLYHRLLD--KAHPIK 120
Query: 485 WSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMN----PKISDFGLARAF 539
           WS +  ++   A G+ Y+ Q+    I+HRDL++ N+ L   D N     K++DFGL++  
Sbjct: 121 WSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-- 177
Query: 540 GGDETEGNTNRVVGTYGYMAPEY--ASDGQFSVKSDVFSFGILLLEIVSGKK--NRGFYH 595
              ++  + + ++G + +MAPE   A +  ++ K+D +SF ++L  I++G+   +   Y 
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 596 SDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPS 655
               +N+IR       EG+   + + C     N+ E         LC    P+ RP    
Sbjct: 235 KIKFINMIR------EEGLRPTIPEDCPPRLRNVIE---------LCWSGDPKKRPHFSY 279
Query: 656 VI 657
           ++
Sbjct: 280 IV 281

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 21/224 (9%)
Query: 394 KLGEGGFGPVYKG---TLADEQE---IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           +LGEG FG V+      L  EQ+   +AVK L + SE   ++ + E  L + LQH+++V+
Sbjct: 25  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ-ERCKL-----------LDWSKRFHIICGT 495
             G C  G   L+++E+M +  L+ F+       KL           L   +   +    
Sbjct: 85  FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           A G++YL   + L  +HRDL   N L+ Q +  KI DFG++R     +      R +   
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            +M PE     +F+ +SDV+SFG++L EI +  K   +  S+ +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 245

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  K++H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 77  QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYG 190
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 77  QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 132 RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYG 190
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 9/204 (4%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 25  QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
            +G      +  ++ ++    SL   +   E     +  K   I   TARG+ YLH  S 
Sbjct: 85  FMGYSTK-PQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE---YAS 564
             IIHRDLK++N+ L +D   KI DFGLA             ++ G+  +MAPE      
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 565 DGQFSVKSDVFSFGILLLEIVSGK 588
              +S +SDV++FGI+L E+++G+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ 222

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 110/225 (48%), Gaps = 32/225 (14%)
Query: 387 DNFSINKKLGEGGFGPVYKGT---LADEQ---EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +N    K LG G FG V + T   L  E    ++AVK L   +    KE L +E+ + S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR---------- 488
           L QH N+V LLG C HG   L+I E+     L +F+  ++R   L++S            
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-RRKRPPGLEYSYNPSHNPEEQLS 164
Query: 489 ----FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE- 543
                H     A+G+ +L   +    IHRD+ A NVLL      KI DFGLAR    D  
Sbjct: 165 SRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 544 --TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +GN    V    +MAPE   D  ++V+SDV+S+GILL EI S
Sbjct: 222 YIVKGNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLDWSKRFHIICGTARGLLYLH 503
            +G      +  ++ ++    SL   +       E  KL+D +++      TA+G+ YLH
Sbjct: 69  FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY- 562
             S   IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE  
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 563 --ASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +S +SDV++FGI+L E+++G+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 34  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ YL   
Sbjct: 94  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 148
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E     N+        +MA E  
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 21/224 (9%)
Query: 394 KLGEGGFGPVYKG---TLADEQE---IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           +LGEG FG V+      L  EQ+   +AVK L + SE   ++ + E  L + LQH+++V+
Sbjct: 19  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ-ERCKL-----------LDWSKRFHIICGT 495
             G C  G   L+++E+M +  L+ F+       KL           L   +   +    
Sbjct: 79  FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           A G++YL   + L  +HRDL   N L+ Q +  KI DFG++R     +      R +   
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            +M PE     +F+ +SDV+SFG++L EI +  K   +  S+ +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 239

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 14  QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLDWSKRFHIICGTARGLLYLH 503
            +G      +  ++ ++    SL   +       E  KL+D +++      TA+G+ YLH
Sbjct: 74  FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 126
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-- 561
             S   IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE  
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 562 -YASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +S +SDV++FGI+L E+++G+
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 211

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 35  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E+M N SLDSF+  ++        +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVG 151
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 152 MLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 11  QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLDWSKRFHIICGTARGLLYLH 503
            +G      +  ++ ++    SL   +       E  KL+D +++      TA+G+ YLH
Sbjct: 71  FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 123
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY- 562
             S   IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE  
Sbjct: 124 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 563 --ASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +S +SDV++FGI+L E+++G+
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 208

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 6   VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E+M N SLDSF+   +        +   
Sbjct: 65  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVG 122
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 123 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 14  QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLDWSKRFHIICGTARGLLYLH 503
            +G      +  ++ ++    SL   +       E  KL+D +++      TA+G+ YLH
Sbjct: 74  FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 126
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-- 561
             S   IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE  
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 562 -YASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +S +SDV++FGI+L E+++G+
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 211

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 23  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E+M N SLDSF+   +        +   
Sbjct: 82  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVG 139
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 140 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 26/277 (9%)
Query: 394 KLGEGGFGPVYKG---TLADEQE---IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           +LGEG FG V+      L  EQ+   +AVK L + SE   ++ + E  L + LQH+++V+
Sbjct: 48  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ-ERCKL-----------LDWSKRFHIICGT 495
             G C  G   L+++E+M +  L+ F+       KL           L   +   +    
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           A G++YL   + L  +HRDL   N L+ Q +  KI DFG++R     +      R +   
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK-LNLIRHAWKLWN-EG 613
            +M PE     +F+ +SDV+SFG++L EI +  K   +  S+ + ++ I    +L     
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA 284
Query: 614 MPSQ---LIDACFKDSFNLAEVIRCIHIGLLCVQQYP 647
            P +   ++  C++        I+ +H  L  + Q P
Sbjct: 285 CPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 33  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E+M N SLDSF+   +        +   
Sbjct: 92  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVG 149
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 150 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 37  QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLDWSKRFHIICGTARGLLYLH 503
            +G      +  ++ ++    SL   +       E  KL+D +++      TA+G+ YLH
Sbjct: 97  FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 149
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-- 561
             S   IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE  
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 562 -YASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +S +SDV++FGI+L E+++G+
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 234

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 36  QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLDWSKRFHIICGTARGLLYLH 503
            +G      +  ++ ++    SL   +       E  KL+D +++      TA+G+ YLH
Sbjct: 96  FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 148
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-- 561
             S   IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE  
Sbjct: 149 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 562 -YASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +S +SDV++FGI+L E+++G+
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 233

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLDWSKRFHIICGTARGLLYLH 503
            +G      +  ++ ++    SL   +       E  KL+D +++      TA+G+ YLH
Sbjct: 69  FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY- 562
             S   IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE  
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 563 --ASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +S +SDV++FGI+L E+++G+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 26/234 (11%)
Query: 393 KKLGEGGFGPVYKGTL------ADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHRNL 445
           ++LGE  FG VYKG L         Q +A+K L   +E  L+E  ++E +L ++LQH N+
Sbjct: 32  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 446 VKLLGC-------------CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHII 492
           V LLG              C HG+    +    P+  + S   D+     L+     H++
Sbjct: 92  VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTNRV 551
              A G+ YL   S   ++H+DL   NVL+   +N KISD GL R  +  D  +   N +
Sbjct: 152 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIR 604
           +    +MAPE    G+FS+ SD++S+G++L E+ S G +    Y + + + +IR
Sbjct: 209 LPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 261

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 26/234 (11%)
Query: 393 KKLGEGGFGPVYKGTL------ADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHRNL 445
           ++LGE  FG VYKG L         Q +A+K L   +E  L+E  ++E +L ++LQH N+
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 446 VKLLGC-------------CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHII 492
           V LLG              C HG+    +    P+  + S   D+     L+     H++
Sbjct: 75  VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTNRV 551
              A G+ YL   S   ++H+DL   NVL+   +N KISD GL R  +  D  +   N +
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIR 604
           +    +MAPE    G+FS+ SD++S+G++L E+ S G +    Y + + + +IR
Sbjct: 192 LPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 244

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 35  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E+M N SLDSF+  ++        +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVG 151
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 35  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E+M N SLDSF+   +        +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVG 151
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 35  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E+M N SLDSF+   +        +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVG 151
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 35  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E+M N SLDSF+   +        +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVG 151
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 142/269 (52%), Gaps = 27/269 (10%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELK-NE 433
           L  + ++ +    ++  +K+G+G  G VY    +A  QE+A+++++ + +Q  KEL  NE
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 67
Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
           I++  + ++ N+V  L   + G+E  ++ E++   SL   +   E C  +D  +   +  
Sbjct: 68  ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 123
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              + L +LH +   ++IHRD+K+ N+LL  D + K++DFG       ++++ +T  +VG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVG 178
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           T  +MAPE  +   +  K D++S GI+ +E++ G+     Y ++N L   R  + +   G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPL---RALYLIATNG 232
Query: 614 MPS----QLIDACFKDSFNLAEVIRCIHI 638
            P     + + A F+D  N     RC+ +
Sbjct: 233 TPELQNPEKLSAIFRDFLN-----RCLDM 256

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M    L  F+   E  K L   +   +    A G+ Y+    
Sbjct: 77  QLYAV-VSEEPIYIVMEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYG 190
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLV 243
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+    
Sbjct: 244 QLYAV-VSEEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 298
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYMAPEYAS 564
           R+  +HRDL+A+N+L+ +++  K++DFGL R    +E    T R    +   + APE A 
Sbjct: 299 RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY---TARQGAKFPIKWTAPEAAL 355
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
            G+F++KSDV+SFGILL E+ +
Sbjct: 356 YGRFTIKSDVWSFGILLTELTT 377

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 19  RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI EF+P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 79  YKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 7/200 (3%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 18  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L    +  E   ++ E+M    L  F+   E  K L   +   +    A G+ Y+    
Sbjct: 77  QLYAV-VSEEPIYIVTEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE--- 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYG 190
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 29  QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLDWSKRFHIICGTARGLLYLH 503
            +G      +  ++ ++    SL   +       E  KL+D +++      TA+G+ YLH
Sbjct: 89  FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 141
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-- 561
             S   IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE  
Sbjct: 142 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 562 -YASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +S +SDV++FGI+L E+++G+
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 226

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 35  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E+M N SLDSF+  ++        +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVG 151
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL R    D     T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 54  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ YL   
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 168
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG--TYGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E     N+        +MA E  
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMT 251

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
             ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++ 
Sbjct: 37  QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLLDWSKRFHIICGTARGLLYLH 503
            +G      +  ++ ++    SL   +       E  KL+D +++      TA+G+ YLH
Sbjct: 97  FMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ------TAQGMDYLH 149
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-- 561
             S   IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE  
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 562 -YASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +S +SDV++FGI+L E+++G+
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQ 234

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ YL   
Sbjct: 90  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 144
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E     N+        +MA E  
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMT 227

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 53  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ YL   
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 167
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG--TYGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E     N+        +MA E  
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMT 250

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ YL   
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 149
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E     N+        +MA E  
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ YL   
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 149
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E     N+        +MA E  
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ YL   
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 146
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E     N+        +MA E  
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMT 229

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 27  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ YL   
Sbjct: 87  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 141
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E     N+        +MA E  
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMT 224

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 95.9 bits (237), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 34  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ YL   
Sbjct: 94  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 148
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E     N+        +MA E  
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT 231

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 33  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ YL   
Sbjct: 93  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYL--- 147
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E     N+        +MA E  
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ +L   
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 149
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E +   N+        +MA E  
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 36  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ +L   
Sbjct: 96  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 150
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E +   N+        +MA E  
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT 233

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 40  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ +L   
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 154
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E +   N+        +MA E  
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMT 237

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 35/287 (12%)
Query: 392 NKKLGEGGFGPVYKGTLA-----DEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHRNL 445
            K +G G FG VYKG L       E  +A+K L +  +E+   +   E  +  +  H N+
Sbjct: 49  QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           ++L G     +  ++I E+M N +LD F+  +E+       +   ++ G A G+ YL   
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMKYL--- 163
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNTNRVVGTYGYMAPEYAS 564
           + +  +HRDL A N+L++ ++  K+SDFGL+R    D E    T+       + APE  S
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 565 DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK 624
             +F+  SDV+SFGI++ E+++  +              R  W+L N       +     
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGE--------------RPYWELSNHE-----VMKAIN 264
Query: 625 DSFNLAEVIRC----IHIGLLCVQQYPEDRPCMPSVILMLGSEIVLP 667
           D F L   + C      + + C QQ    RP    ++ +L   I  P
Sbjct: 265 DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ +L   
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 149
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG--TYGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E +   N+        +MA E  
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 14  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +L     SK   
Sbjct: 74  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 133
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 134 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 244
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 245 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 289
Query: 671 QPGY 674
           +PG+
Sbjct: 290 EPGF 293

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ +L   
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 208
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG--TYGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E +   N+        +MA E  
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMT 291

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 17  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +L     SK   
Sbjct: 77  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 247
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 248 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 292
Query: 671 QPGY 674
           +PG+
Sbjct: 293 EPGF 296

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 33  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ +L   
Sbjct: 93  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 147
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E +   N+        +MA E  
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT 230

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 149/302 (49%), Gaps = 44/302 (14%)
Query: 373 DLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQG----- 426
           + P   L T+A+  +     K++G+GGFG V+KG L  D+  +A+K L     +G     
Sbjct: 7   EFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 427 --LKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD 484
              +E + E+ + S L H N+VKL G  +H   ++++ EF+P   L   + D  +   + 
Sbjct: 65  EKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRMVM-EFVPCGDLYHRLLD--KAHPIK 120
Query: 485 WSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMN----PKISDFGLARAF 539
           WS +  ++   A G+ Y+ Q+    I+HRDL++ N+ L   D N     K++DFG ++  
Sbjct: 121 WSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-- 177
Query: 540 GGDETEGNTNRVVGTYGYMAPEY--ASDGQFSVKSDVFSFGILLLEIVSGKK--NRGFYH 595
              ++  + + ++G + +MAPE   A +  ++ K+D +SF ++L  I++G+   +   Y 
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 596 SDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPS 655
               +N+IR       EG+   + + C     N+ E         LC    P+ RP    
Sbjct: 235 KIKFINMIR------EEGLRPTIPEDCPPRLRNVIE---------LCWSGDPKKRPHFSY 279
Query: 656 VI 657
           ++
Sbjct: 280 IV 281

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 16  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +L     SK   
Sbjct: 76  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 246
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 247 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 291
Query: 671 QPGY 674
           +PG+
Sbjct: 292 EPGF 295

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q   + +D  K         +G+ YL   
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYL--- 133
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 10  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +L     SK   
Sbjct: 70  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 240
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 241 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 285
Query: 671 QPGY 674
           +PG+
Sbjct: 286 EPGF 289

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 16  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +L     SK   
Sbjct: 76  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 246
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 247 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 291
Query: 671 QPGY 674
           +PG+
Sbjct: 292 EPGF 295

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 45  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +L     SK   
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 164
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 165 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 221
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 222 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 275
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 276 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 320
Query: 671 QPGY 674
           +PG+
Sbjct: 321 EPGF 324

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D        AVK L++I++ G + +   E I+     H N++
Sbjct: 36  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 447 KLLGCCIHGE-EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +    A+G+ +L   
Sbjct: 96  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFL--- 150
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT--YGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E +   N+        +MA E  
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT 233

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 23  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +L     SK   
Sbjct: 83  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 142
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 253
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 254 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 298
Query: 671 QPGY 674
           +PG+
Sbjct: 299 EPGF 302

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 6   VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E M N SLDSF+   +        +   
Sbjct: 65  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--AQFTVIQLVG 122
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 123 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 141/269 (52%), Gaps = 27/269 (10%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELK-NE 433
           L  + ++ +    ++  +K+G+G  G VY    +A  QE+A+++++ + +Q  KEL  NE
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 67
Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
           I++  + ++ N+V  L   + G+E  ++ E++   SL   +   E C  +D  +   +  
Sbjct: 68  ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 123
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              + L +LH +   ++IHRD+K+ N+LL  D + K++DFG       ++++   + +VG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVG 178
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           T  +MAPE  +   +  K D++S GI+ +E++ G+     Y ++N L   R  + +   G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPL---RALYLIATNG 232
Query: 614 MPS----QLIDACFKDSFNLAEVIRCIHI 638
            P     + + A F+D  N     RC+ +
Sbjct: 233 TPELQNPEKLSAIFRDFLN-----RCLEM 256

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 141/266 (53%), Gaps = 27/266 (10%)
Query: 379 LATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELK-NEIIL 436
           + ++ +    ++  +K+G+G  G VY    +A  QE+A+++++ + +Q  KEL  NEI++
Sbjct: 13  IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINEILV 71
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             + ++ N+V  L   + G+E  ++ E++   SL   +   E C  +D  +   +     
Sbjct: 72  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCRECL 127
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           + L +LH +   ++IHR++K+ N+LL  D + K++DFG       ++++ +T  +VGT  
Sbjct: 128 QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPY 182
Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           +MAPE  +   +  K D++S GI+ +E++ G+     Y ++N L   R  + +   G P 
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPL---RALYLIATNGTPE 236
Query: 617 ----QLIDACFKDSFNLAEVIRCIHI 638
               + + A F+D  N     RC+ +
Sbjct: 237 LQNPEKLSAIFRDFLN-----RCLEM 257

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 141/269 (52%), Gaps = 27/269 (10%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELK-NE 433
           L  + ++ +    ++  +K+G+G  G VY    +A  QE+A+++++ + +Q  KEL  NE
Sbjct: 10  LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 68
Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
           I++  + ++ N+V  L   + G+E  ++ E++   SL   +   E C  +D  +   +  
Sbjct: 69  ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 124
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              + L +LH +   ++IHRD+K+ N+LL  D + K++DFG       ++++   + +VG
Sbjct: 125 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVG 179
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           T  +MAPE  +   +  K D++S GI+ +E++ G+     Y ++N L   R  + +   G
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPL---RALYLIATNG 233
Query: 614 MPS----QLIDACFKDSFNLAEVIRCIHI 638
            P     + + A F+D  N     RC+ +
Sbjct: 234 TPELQNPEKLSAIFRDFLN-----RCLEM 257

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 21  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 81  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 135
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 13/200 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISE-QGLKELK-NEIILFSKLQHRNLVKLLG 450
           +K+GEG +G VYK   +  + +A+KR+   +E +G+      EI L  +L H N+V L+ 
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 451 CCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
             IH E  L L++EFM  K L   + D+ +  L D   + ++     RG+ + HQ    R
Sbjct: 87  V-IHSERCLTLVFEFM-EKDLKK-VLDENKTGLQDSQIKIYLY-QLLRGVAHCHQH---R 139
Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY-ASDGQF 568
           I+HRDLK  N+L++ D   K++DFGLARAF G      T+ VV T  Y AP+      ++
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKY 197
Query: 569 SVKSDVFSFGILLLEIVSGK 588
           S   D++S G +  E+++GK
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 141/269 (52%), Gaps = 27/269 (10%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELK-NE 433
           L  + ++ +    ++  +K+G+G  G VY    +A  QE+A+++++ + +Q  KEL  NE
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKELIINE 67
Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
           I++  + ++ N+V  L   + G+E  ++ E++   SL   +   E C  +D  +   +  
Sbjct: 68  ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETC--MDEGQIAAVCR 123
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              + L +LH +   ++IHRD+K+ N+LL  D + K++DFG       ++++   + +VG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVG 178
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           T  +MAPE  +   +  K D++S GI+ +E++ G+     Y ++N L   R  + +   G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPL---RALYLIATNG 232
Query: 614 MPS----QLIDACFKDSFNLAEVIRCIHI 638
            P     + + A F+D  N     RC+ +
Sbjct: 233 TPELQNPEKLSAIFRDFLN-----RCLDM 256

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 22  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 82  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 136
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 161
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 149/302 (49%), Gaps = 44/302 (14%)
Query: 373 DLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQG----- 426
           + P   L T+A+  +     K++G+GGFG V+KG L  D+  +A+K L     +G     
Sbjct: 7   EFPKSRLPTLAD--NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI 64
Query: 427 --LKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD 484
              +E + E+ + S L H N+VKL G  +H   ++++ EF+P   L   + D  +   + 
Sbjct: 65  EKFQEFQREVFIMSNLNHPNIVKLYG-LMHNPPRMVM-EFVPCGDLYHRLLD--KAHPIK 120
Query: 485 WSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMN----PKISDFGLARAF 539
           WS +  ++   A G+ Y+ Q+    I+HRDL++ N+ L   D N     K++DF L++  
Sbjct: 121 WSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-- 177
Query: 540 GGDETEGNTNRVVGTYGYMAPEY--ASDGQFSVKSDVFSFGILLLEIVSGKK--NRGFYH 595
              ++  + + ++G + +MAPE   A +  ++ K+D +SF ++L  I++G+   +   Y 
Sbjct: 178 ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 596 SDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPS 655
               +N+IR       EG+   + + C     N+ E         LC    P+ RP    
Sbjct: 235 KIKFINMIR------EEGLRPTIPEDCPPRLRNVIE---------LCWSGDPKKRPHFSY 279
Query: 656 VI 657
           ++
Sbjct: 280 IV 281

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 13/200 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISE-QGLKELK-NEIILFSKLQHRNLVKLLG 450
           +K+GEG +G VYK   +  + +A+KR+   +E +G+      EI L  +L H N+V L+ 
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 451 CCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
             IH E  L L++EFM  K L   + D+ +  L D   + ++     RG+ + HQ    R
Sbjct: 87  V-IHSERCLTLVFEFM-EKDLKK-VLDENKTGLQDSQIKIYLY-QLLRGVAHCHQH---R 139
Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY-ASDGQF 568
           I+HRDLK  N+L++ D   K++DFGLARAF G      T+ VV T  Y AP+      ++
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-TLWYRAPDVLMGSKKY 197
Query: 569 SVKSDVFSFGILLLEIVSGK 588
           S   D++S G +  E+++GK
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 20  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 80  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 134
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 35  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E M N SLDSF+   +        +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--AQFTVIQLVG 151
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 152 MLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 12/217 (5%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKEL 430
           + E A   +AT N SI+K +G G FG V  G L      E  +A+K L    +E+  ++ 
Sbjct: 35  VHEFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E  +  +  H N+++L G     +  +++ E M N SLDSF+   +        +   
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD--AQFTVIQLVG 151
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++ G A G+ YL   S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 551 VVGT-YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                  + +PE  +  +F+  SDV+S+GI+L E++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 15  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 75  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 129
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 14  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 74  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 128
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 23  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 83  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 137
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 111/216 (51%), Gaps = 10/216 (4%)
Query: 389 FSINKKLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           F + +KLGEG +G VYK    +  Q +A+K++    E  L+E+  EI +  +    ++VK
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVK 88
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
             G      +  ++ E+    S+   I  + R K L   +   I+  T +GL YLH    
Sbjct: 89  YYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLH---F 143
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
           +R IHRD+KA N+LL+ + + K++DFG+A      +     N V+GT  +MAPE   +  
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 568 FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
           ++  +D++S GI  +E+  GK      H    + +I
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 141/304 (46%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 10  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF----DQERCKLL---DWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++     + E   +L     SK   
Sbjct: 70  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N  + +D   KI DFG+ R     +      +
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 240
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 241 ---MEGGLLDKPDNCPDMLLELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 285
Query: 671 QPGY 674
           +PG+
Sbjct: 286 EPGF 289

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 13  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-------FDQERCKLLDWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++        +         SK   
Sbjct: 73  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 133 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 243
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 244 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 288
Query: 671 QPGY 674
           +PG+
Sbjct: 289 EPGF 292

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 38/304 (12%)
Query: 385 ATDNFSINKKLGEGGFGPVY----KGTLADEQE--IAVKRLSKISEQGLK-ELKNEIILF 437
           A +  +++++LG+G FG VY    KG + DE E  +A+K +++ +    + E  NE  + 
Sbjct: 23  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-------FDQERCKLLDWSKRFH 490
            +    ++V+LLG    G+  L+I E M    L S++        +         SK   
Sbjct: 83  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +    A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      +
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW 610
            +    +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R      
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV---- 253
Query: 611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK 670
              M   L+D        L E++R      +C Q  P+ RP    +I  +  E+      
Sbjct: 254 ---MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEM------ 298
Query: 671 QPGY 674
           +PG+
Sbjct: 299 EPGF 302

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 395 LGEGGFGPVYKGTLADEQEIAV-KRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCI 453
           LG+G FG   K T  +  E+ V K L +  E+  +    E+ +   L+H N++K +G   
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 454 HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHR 513
             +    I E++   +L   I   +      WS+R       A G+ YLH    + IIHR
Sbjct: 78  KDKRLNFITEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 514 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR------------VVGTYGYMAPE 561
           DL + N L+ ++ N  ++DFGLAR    ++T+    R            VVG   +MAPE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +   +  K DVFSFGI+L EI+
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII 216

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 22/232 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT------LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
           +  + ++LGEG FG V+           D+  +AVK L   +    K+ + E  L + LQ
Sbjct: 16  DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ 75
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI--FDQERCKLLD-----------WSKR 488
           H ++VK  G C  G+  ++++E+M +  L+ F+     +   L+D            S+ 
Sbjct: 76  HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
            HI    A G++YL   +    +HRDL   N L+  ++  KI DFG++R     +     
Sbjct: 136 LHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG 192
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
              +    +M PE     +F+ +SDV+SFG++L EI +  K   F  S+ ++
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 109/211 (51%), Gaps = 21/211 (9%)
Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI----SEQGLKELKNEIILFSK 439
           N  D + I  +LG+G FG VYK   A  +E +V   +K+    SE+ L++   EI + + 
Sbjct: 34  NPEDFWEIIGELGDGAFGKVYK---AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 90
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG-TARG 498
             H N+VKLL    +     ++ EF    ++D+ + + ER        +  ++C  T   
Sbjct: 91  CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDA 147
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L YLH +   +IIHRDLKA N+L   D + K++DFG++       T    +  +GT  +M
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQRRDSFIGTPYWM 202
Query: 559 APEY-----ASDGQFSVKSDVFSFGILLLEI 584
           APE      + D  +  K+DV+S GI L+E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 36/277 (12%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +++G G FG V+ G   ++ ++A+K  R   +SE+   E + E+++  KL H  LV+L G
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 69
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            C+      L++EFM +  L  ++  Q    L        +      G+ YL + S   +
Sbjct: 70  VCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAS---V 124
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDL A N L+ ++   K+SDFG+ R    D+   +T        + +PE  S  ++S 
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSS 183
Query: 571 KSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPS----QLIDACFKD 625
           KSDV+SFG+L+ E+ S GK       +   +  I   ++L+   + S    Q+++ C+K+
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 243
Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS 662
                                PEDRP    ++  L +
Sbjct: 244 R--------------------PEDRPAFSRLLRQLAA 260

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHRDL   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G FG VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 12  DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL + +
Sbjct: 71  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYN 185
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 92.0 bits (227), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYN 192
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 78  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQH N+VK
Sbjct: 17  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 448 LLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
             G C   G   L LI E++P  SL  ++  Q+  + +D  K         +G+ YL   
Sbjct: 77  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYL--- 131
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYAS 564
              R IHR+L   N+L++ +   KI DFGL +    D+              + APE  +
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           + +FSV SDV+SFG++L E+ +
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 76
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 77  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 135
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 136 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 191
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 192 KFSIKSDVWAFGVLLWEIAT 211

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 15  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 74  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 132
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 133 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYN 188
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 189 KFSIKSDVWAFGVLLWEIAT 208

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 75  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 189
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT 209

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 12  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL + +
Sbjct: 71  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYN 185
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 75  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 189
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT 209

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 27  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 85
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 86  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEKKN 144
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 145 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 200
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 201 KFSIKSDVWAFGVLLWEIAT 220

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL + +
Sbjct: 73  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL + +
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL + +
Sbjct: 73  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL + +
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL + +
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN 136
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 33  DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 91
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       ++ E+MP  +L  ++ +  R ++       ++    +  + YL + +
Sbjct: 92  QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-VVLLYMATQISSAMEYLEKKN 150
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 151 ---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 206
Query: 567 QFSVKSDVFSFGILLLEIVS 586
            FS+KSDV++FG+LL EI +
Sbjct: 207 TFSIKSDVWAFGVLLWEIAT 226

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 12  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL + +
Sbjct: 71  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAYN 185
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 15  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 74  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 132
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD              + APE  +  
Sbjct: 133 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYN 188
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 189 KFSIKSDVWAFGVLLWEIAT 208

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 21/211 (9%)
Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI----SEQGLKELKNEIILFSK 439
           N  D + I  +LG+G FG VYK   A  +E +V   +K+    SE+ L++   EI + + 
Sbjct: 34  NPEDFWEIIGELGDGAFGKVYK---AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 90
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG-TARG 498
             H N+VKLL    +     ++ EF    ++D+ + + ER        +  ++C  T   
Sbjct: 91  CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDA 147
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L YLH +   +IIHRDLKA N+L   D + K++DFG++            +  +GT  +M
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQRRDSFIGTPYWM 202
Query: 559 APEY-----ASDGQFSVKSDVFSFGILLLEI 584
           APE      + D  +  K+DV+S GI L+E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 21/211 (9%)
Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI----SEQGLKELKNEIILFSK 439
           N  D + I  +LG+G FG VYK   A  +E +V   +K+    SE+ L++   EI + + 
Sbjct: 34  NPEDFWEIIGELGDGAFGKVYK---AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 90
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG-TARG 498
             H N+VKLL    +     ++ EF    ++D+ + + ER        +  ++C  T   
Sbjct: 91  CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDA 147
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L YLH +   +IIHRDLKA N+L   D + K++DFG++            +  +GT  +M
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRXIQRRDXFIGTPYWM 202
Query: 559 APEY-----ASDGQFSVKSDVFSFGILLLEI 584
           APE      + D  +  K+DV+S GI L+E+
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEM 233

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 114/215 (53%), Gaps = 12/215 (5%)
Query: 379 LAT-IANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK--ISEQGL-KELKNE 433
           LAT I    ++F +   LG+G F  VY+  ++    E+A+K + K  + + G+ + ++NE
Sbjct: 2   LATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
           + +  +L+H ++++L           L+ E   N  ++ ++  + R K    ++  H + 
Sbjct: 62  VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMH 119
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
               G+LYLH      I+HRDL  SN+LL ++MN KI+DFGLA        +  T  + G
Sbjct: 120 QIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCG 174
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  Y++PE A+     ++SDV+S G +   ++ G+
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 75  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL A N L+ ++   K++DFGL+R   GD              + APE  +  
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYN 189
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT 209

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 14/228 (6%)
Query: 391 INKKLGEGGFGPVYKGTLA----DEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHRNL 445
           I + +G G FG V  G L      E  +A+K L S  +E+  ++  +E  +  +  H N+
Sbjct: 37  IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           + L G        ++I EFM N SLDSF+  ++        +   ++ G A G+ YL   
Sbjct: 97  IHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL--- 151
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG---TYGYMAPEY 562
           + +  +HRDL A N+L++ ++  K+SDFGL+R    D ++      +G      + APE 
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 563 ASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKL 609
               +F+  SDV+S+GI++ E++S G++      + + +N I   ++L
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL 259

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +++G G FG V+ G   ++ ++A+K  R   +SE+   E + E+++  KL H  LV+L G
Sbjct: 11  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 67
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            C+      L++EFM +  L  ++  Q    L        +      G+ YL +     +
Sbjct: 68  VCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDL A N L+ ++   K+SDFG+ R    D+   +T        + +PE  S  ++S 
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSS 181
Query: 571 KSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPS----QLIDACFKD 625
           KSDV+SFG+L+ E+ S GK       +   +  I   ++L+   + S    Q+++ C+K+
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 241
Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG 661
                                PEDRP    ++  L 
Sbjct: 242 R--------------------PEDRPAFSRLLRQLA 257

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +++G G FG V+ G   ++ ++A+K  R   +SE+   E + E+++  KL H  LV+L G
Sbjct: 13  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 69
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            C+      L++EFM +  L  ++  Q    L        +      G+ YL +     +
Sbjct: 70  VCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDL A N L+ ++   K+SDFG+ R    D+   +T        + +PE  S  ++S 
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSS 183
Query: 571 KSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPS----QLIDACFKD 625
           KSDV+SFG+L+ E+ S GK       +   +  I   ++L+   + S    Q+++ C+K+
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 243
Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG 661
                                PEDRP    ++  L 
Sbjct: 244 R--------------------PEDRPAFSRLLRQLA 259

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 30/246 (12%)
Query: 394 KLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLL 449
           K+GEG  G V    LA E+    ++AVK +    +Q  + L NE+++    QH N+V++ 
Sbjct: 52  KIGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC-GTARGLLYLHQDSRL 508
              + GEE  ++ EF+   +L   I  Q R       ++   +C    + L YLH     
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTD-IVSQVRLN----EEQIATVCEAVLQALAYLHAQG-- 161
Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF 568
            +IHRD+K+ ++LL  D   K+SDFG       D  +     +VGT  +MAPE  S   +
Sbjct: 162 -VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLY 218
Query: 569 SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFN 628
           + + D++S GI+++E+V G+     Y SD+ +     A K   +  P +L     K+S  
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPP---YFSDSPVQ----AMKRLRDSPPPKL-----KNSHK 266
Query: 629 LAEVIR 634
           ++ V+R
Sbjct: 267 VSPVLR 272

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 388 NFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSK-ISEQGLKELKNEIILFSKL 440
           N  + K LGEG FG V K T       A    +AVK L +  S   L++L +E  +  ++
Sbjct: 24  NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERC-------------KLLDWSK 487
            H +++KL G C      LLI E+    SL  F+ +  +                LD   
Sbjct: 84  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 488 RFHIICG--------TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 539
              +  G         ++G+ YL   + ++++HRDL A N+L+ +    KISDFGL+R  
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDN 598
             +++    ++      +MA E   D  ++ +SDV+SFG+LL EIV+ G         + 
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSV 656
             NL++   ++       +  D C ++ + L          L C +Q P+ RP    +
Sbjct: 261 LFNLLKTGHRM-------ERPDNCSEEMYRLM---------LQCWKQEPDKRPVFADI 302

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +++G G FG V+ G   ++ ++A+K  R   +SE+   E + E+++  KL H  LV+L G
Sbjct: 16  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 72
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            C+      L++EFM +  L  ++  Q    L        +      G+ YL +     +
Sbjct: 73  VCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDL A N L+ ++   K+SDFG+ R    D+   +T        + +PE  S  ++S 
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSS 186
Query: 571 KSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPS----QLIDACFKD 625
           KSDV+SFG+L+ E+ S GK       +   +  I   ++L+   + S    Q+++ C+++
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRE 246
Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG 661
                                PEDRP    ++  L 
Sbjct: 247 R--------------------PEDRPAFSRLLRQLA 262

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 140/283 (49%), Gaps = 23/283 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLS-KISEQGLKELKNEIILFSKLQHRN 444
           D++ + + +G G    V     A ++E +A+KR++ +  +  + EL  EI   S+  H N
Sbjct: 10  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD-----QERCKLLDWSKRFHIICGTARGL 499
           +V      +  +E  L+ + +   S+   I       + +  +LD S    I+     GL
Sbjct: 70  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGNTNRV-VGTYG 556
            YLH++ +   IHRD+KA N+LL +D + +I+DFG++   A GGD T     +  VGT  
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 557 YMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP 615
           +MAPE     + +  K+D++SFGI  +E+ +G      YH    + ++     L N+  P
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP---YHKYPPMKVL--MLTLQNDP-P 240
Query: 616 SQLIDACFKDSFNLAEVIRCIHIGL-LCVQQYPEDRPCMPSVI 657
           S  ++   +D   L +  +     + LC+Q+ PE RP    ++
Sbjct: 241 S--LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 29/267 (10%)
Query: 377 FELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIIL 436
            +L+ + +    F + + +G G +G VYKG      ++A  ++  ++    +E+K EI +
Sbjct: 14  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM 73
Query: 437 FSKL-QHRNLVKLLGCCIH------GEEKLLIYEFMPNKSLDSFIFDQERCKLL-DWSKR 488
             K   HRN+    G  I        ++  L+ EF    S+   I + +   L  +W   
Sbjct: 74  LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW--- 130
Query: 489 FHIIC-GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 547
              IC    RGL +LHQ    ++IHRD+K  NVLL ++   K+ DFG++     D T G 
Sbjct: 131 IAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGR 185
Query: 548 TNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL 602
            N  +GT  +MAPE  +     D  +  KSD++S GI  +E+  G       H    L L
Sbjct: 186 RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL 245
Query: 603 I------RHAWKLWNEGMPSQLIDACF 623
           I      R   K W++   S  I++C 
Sbjct: 246 IPRNPAPRLKSKKWSKKFQS-FIESCL 271

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 37  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL  C    E+      +  N  L  +I     FD E C       RF+       
Sbjct: 97  PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 148
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 149 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAG 235

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 388 NFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSK-ISEQGLKELKNEIILFSKL 440
           N  + K LGEG FG V K T       A    +AVK L +  S   L++L +E  +  ++
Sbjct: 24  NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERC-------------KLLDWSK 487
            H +++KL G C      LLI E+    SL  F+ +  +                LD   
Sbjct: 84  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 488 RFHIICG--------TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 539
              +  G         ++G+ YL   + ++++HRDL A N+L+ +    KISDFGL+R  
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDN 598
             +++    ++      +MA E   D  ++ +SDV+SFG+LL EIV+ G         + 
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSV 656
             NL++   ++       +  D C ++ + L          L C +Q P+ RP    +
Sbjct: 261 LFNLLKTGHRM-------ERPDNCSEEMYRLM---------LQCWKQEPDKRPVFADI 302

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 122/229 (53%), Gaps = 16/229 (6%)
Query: 391 INKKLGEGGFGPVYKGTLA----DEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNL 445
           I + +G G FG V +G L      E  +A+K L    +E+  +E  +E  +  + +H N+
Sbjct: 18  IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFI-FDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           ++L G   +    +++ EFM N +LDSF+  +  +  ++   +   ++ G A G+ YL +
Sbjct: 78  IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAE 134
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG---TYGYMAPE 561
              +  +HRDL A N+L++ ++  K+SDFGL+R    + ++      +G      + APE
Sbjct: 135 ---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKL 609
             +  +F+  SD +S+GI++ E++S G++      + + +N I   ++L
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL 240

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 140/283 (49%), Gaps = 23/283 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLS-KISEQGLKELKNEIILFSKLQHRN 444
           D++ + + +G G    V     A ++E +A+KR++ +  +  + EL  EI   S+  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD-----QERCKLLDWSKRFHIICGTARGL 499
           +V      +  +E  L+ + +   S+   I       + +  +LD S    I+     GL
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGNTNRV-VGTYG 556
            YLH++ +   IHRD+KA N+LL +D + +I+DFG++   A GGD T     +  VGT  
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 557 YMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP 615
           +MAPE     + +  K+D++SFGI  +E+ +G      YH    + ++     L N+  P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGA---APYHKYPPMKVL--MLTLQNDP-P 245
Query: 616 SQLIDACFKDSFNLAEVIRCIHIGL-LCVQQYPEDRPCMPSVI 657
           S  ++   +D   L +  +     + LC+Q+ PE RP    ++
Sbjct: 246 S--LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 24/206 (11%)
Query: 398 GGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE- 456
           G FG V+K  L +E  +AVK +  I ++   + + E+     ++H N+++ +G    G  
Sbjct: 35  GRFGCVWKAQLLNEY-VAVK-IFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 457 ---EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-------S 506
              +  LI  F    SL  F+    +  ++ W++  HI    ARGL YLH+D        
Sbjct: 93  VDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           +  I HRD+K+ NVLL  ++   I+DFGLA  F   ++ G+T+  VGT  YMAPE   +G
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL-EG 207
Query: 567 QFSVKSDVF------SFGILLLEIVS 586
             + + D F      + G++L E+ S
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWELAS 233

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 318
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + ++     ++    +  + YL + +
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEKKN 377
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHR+L A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 378 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 433
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 434 KFSIKSDVWAFGVLLWEIAT 453

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ-EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + ++  KLG G +G VY+G        +AVK L + + + ++E   E  +  +++H NLV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 279
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL + +
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEKKN 338
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHR+L A N L+ ++   K++DFGL+R   GD    +         + APE  +  
Sbjct: 339 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 394
Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +FS+KSDV++FG+LL EI +
Sbjct: 395 KFSIKSDVWAFGVLLWEIAT 414

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 122/229 (53%), Gaps = 16/229 (6%)
Query: 391 INKKLGEGGFGPVYKGTLA----DEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNL 445
           I + +G G FG V +G L      E  +A+K L    +E+  +E  +E  +  + +H N+
Sbjct: 20  IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFI-FDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           ++L G   +    +++ EFM N +LDSF+  +  +  ++   +   ++ G A G+ YL +
Sbjct: 80  IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAE 136
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG---TYGYMAPE 561
              +  +HRDL A N+L++ ++  K+SDFGL+R    + ++      +G      + APE
Sbjct: 137 ---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKL 609
             +  +F+  SD +S+GI++ E++S G++      + + +N I   ++L
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL 242

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +++G G FG V+ G   ++ ++A+K + +  +SE    E + E+++  KL H  LV+L G
Sbjct: 33  QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE-EAEVMM--KLSHPKLVQLYG 89
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            C+      L++EFM +  L  ++  Q    L        +      G+ YL +     +
Sbjct: 90  VCLEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDL A N L+ ++   K+SDFG+ R    D+   +T        + +PE  S  ++S 
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSS 203
Query: 571 KSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPS----QLIDACFKD 625
           KSDV+SFG+L+ E+ S GK       +   +  I   ++L+   + S    Q+++ C+K+
Sbjct: 204 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKE 263
Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG 661
                                PEDRP    ++  L 
Sbjct: 264 R--------------------PEDRPAFSRLLRQLA 279

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 388 NFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSK-ISEQGLKELKNEIILFSKL 440
           N  + K LGEG FG V K T       A    +AVK L +  S   L++L +E  +  ++
Sbjct: 24  NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERC-------------KLLDWSK 487
            H +++KL G C      LLI E+    SL  F+ +  +                LD   
Sbjct: 84  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 488 RFHIICG--------TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 539
              +  G         ++G+ YL   + + ++HRDL A N+L+ +    KISDFGL+R  
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDN 598
             +++    ++      +MA E   D  ++ +SDV+SFG+LL EIV+ G         + 
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
Query: 599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSV 656
             NL++   ++       +  D C ++ + L          L C +Q P+ RP    +
Sbjct: 261 LFNLLKTGHRM-------ERPDNCSEEMYRLM---------LQCWKQEPDKRPVFADI 302

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              NT        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SKL
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI + + L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SKL
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 130/279 (46%), Gaps = 47/279 (16%)
Query: 389 FSINKKLGEGGFGPVYK------GTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH 442
           + I  +LG+G FG VYK      G LA     A K +   SE+ L++   EI + +   H
Sbjct: 13  WEIVGELGDGAFGKVYKAKNKETGALA-----AAKVIETKSEEELEDYIVEIEILATCDH 67
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC-GTARGLLY 501
             +VKLLG   H  +  ++ EF P  ++D+ + + +R        +  ++C      L +
Sbjct: 68  PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNF 124
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           LH     RIIHRDLKA NVL+  + + +++DFG++      +T    +  +GT  +MAPE
Sbjct: 125 LHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPE 179
Query: 562 YA-----SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
                   D  +  K+D++S GI L+E+   +         ++LN +R   K+     P+
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH------HELNPMRVLLKIAKSDPPT 233
Query: 617 QLIDAC----FKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            L  +     F+D   +A            + + PE RP
Sbjct: 234 LLTPSKWSVEFRDFLKIA------------LDKNPETRP 260

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 391 INKKLGEGGFGPVYKGTL----ADEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHRNL 445
           I K +G G  G V  G L      +  +A+K L +  +E+  ++  +E  +  +  H N+
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           ++L G    G   +++ E+M N SLD+F+   +        +   ++ G   G+ YL   
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYL--- 167
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAP 560
           S L  +HRDL A NVL+D ++  K+SDFGL+R    D     T     T G     + AP
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT----TGGKIPIRWTAP 223
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID 620
           E  +   FS  SDV+SFG+++ E+++  +              R  W + N  + S +  
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGE--------------RPYWNMTNRDVISSV-- 267
Query: 621 ACFKDSFNLAEVIRCIH----IGLLCVQQYPEDRPCMPSVILMLGSEIVLPQ 668
              ++ + L   + C H    + L C  +    RP    ++ +L + I  P+
Sbjct: 268 ---EEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 37/274 (13%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVK 447
           + I  +LG+G FG VYK    +   +A  ++ +  SE+ L++   EI + +   H  +VK
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC-GTARGLLYLHQDS 506
           LLG   H  +  ++ EF P  ++D+ + + +R        +  ++C      L +LH   
Sbjct: 81  LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHSK- 136
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA--- 563
             RIIHRDLKA NVL+  + + +++DFG++      +T    +  +GT  +MAPE     
Sbjct: 137 --RIIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 564 --SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
              D  +  K+D++S GI L+E+   +         ++LN +R   K+     P+ L  +
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPPH------HELNPMRVLLKIAKSDPPTLLTPS 246
Query: 622 C----FKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
                F+D   +A            + + PE RP
Sbjct: 247 KWSVEFRDFLKIA------------LDKNPETRP 268

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 9/209 (4%)
Query: 383 ANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKL 440
           A   +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L
Sbjct: 1   APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
            H N+VK  G    G  + L  E+     L   I         D  + FH +     G++
Sbjct: 61  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 117
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           YLH    + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+AP
Sbjct: 118 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 561 EYASDGQFSVKS-DVFSFGILLLEIVSGK 588
           E     +F  +  DV+S GI+L  +++G+
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 203

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 36/276 (13%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +++G G FG V+ G   ++ ++A+K  R   +SE+   E + E+++  KL H  LV+L G
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE-EAEVMM--KLSHPKLVQLYG 70
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            C+      L+ EFM +  L  ++  Q    L        +      G+ YL +     +
Sbjct: 71  VCLEQAPICLVTEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDL A N L+ ++   K+SDFG+ R    D+   +T        + +PE  S  ++S 
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSS 184
Query: 571 KSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPS----QLIDACFKD 625
           KSDV+SFG+L+ E+ S GK       +   +  I   ++L+   + S    Q+++ C+++
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRE 244
Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG 661
                                PEDRP    ++  L 
Sbjct: 245 R--------------------PEDRPAFSRLLRQLA 260

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 391 INKKLGEGGFGPVYKGTL----ADEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHRNL 445
           I K +G G  G V  G L      +  +A+K L +  +E+  ++  +E  +  +  H N+
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           ++L G    G   +++ E+M N SLD+F+   +        +   ++ G   G+ YL   
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYL--- 167
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAP 560
           S L  +HRDL A NVL+D ++  K+SDFGL+R    D     T     T G     + AP
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT----TGGKIPIRWTAP 223
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID 620
           E  +   FS  SDV+SFG+++ E+++  +              R  W + N  + S +  
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLAYGE--------------RPYWNMTNRDVISSV-- 267
Query: 621 ACFKDSFNLAEVIRCIH----IGLLCVQQYPEDRPCMPSVILMLGSEIVLPQ 668
              ++ + L   + C H    + L C  +    RP    ++ +L + I  P+
Sbjct: 268 ---EEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 132/289 (45%), Gaps = 34/289 (11%)
Query: 389 FSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +I + +G G FG V  G L      E  +A+K L    +E+  ++   E  +  +  H 
Sbjct: 24  ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N++ L G     +  +++ E+M N SLD+F+  ++        +   ++ G + G+ YL 
Sbjct: 84  NIIHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISAGMKYL- 140
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT-YGYMAPEY 562
             S +  +HRDL A N+L++ ++  K+SDFGL+R    D     T R       + APE 
Sbjct: 141 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 198
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC 622
            +  +F+  SDV+S+GI++ E+VS  +              R  W++ N     Q +   
Sbjct: 199 IAFRKFTSASDVWSYGIVMWEVVSYGE--------------RPYWEMTN-----QDVIKA 239
Query: 623 FKDSFNLAEVIRC----IHIGLLCVQQYPEDRPCMPSVILMLGSEIVLP 667
            ++ + L   + C      + L C Q+    RP    ++ ML   I  P
Sbjct: 240 VEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRNP 288

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD-ETCT------RFYT-AEIVS 143
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++   S  SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 122
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 391 INKKLGEGGFGPVYKGTLA----DEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHRNL 445
           I + +G G FG V  G L      E  +A+K L S  +E+  ++  +E  +  +  H N+
Sbjct: 11  IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           + L G        ++I EFM N SLDSF+  ++        +   ++ G A G+ YL   
Sbjct: 71  IHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL--- 125
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG---TYGYMAPEY 562
           + +  +HR L A N+L++ ++  K+SDFGL+R    D ++      +G      + APE 
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 563 ASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKL 609
               +F+  SDV+S+GI++ E++S G++      + + +N I   ++L
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL 233

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 17  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 77  NPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 130 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 30/275 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +  ++ K+LG G FG V  G    + ++AVK + + S     E   E     KL H  LV
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLV 66
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           K  G C       ++ E++ N  L +++  +   K L+ S+   +      G+ +L    
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLESH- 123
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAPEYA 563
             + IHRDL A N L+D+D+  K+SDFG+ R    D+   +    VGT     + APE  
Sbjct: 124 --QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVF 177
Query: 564 SDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC 622
              ++S KSDV++FGIL+ E+ S GK     Y +   +  +    +L+   + S  I   
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTI--- 234
Query: 623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
                          I   C  + PE RP    ++
Sbjct: 235 -------------YQIMYSCWHELPEKRPTFQQLL 256

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRL-SKISEQGLKELKNEIILF 437
           D   + K LGEG FG V         K       ++AVK L S  +E+ L +L +E+ + 
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           F+         
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           S +  + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG +G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 34/271 (12%)
Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS---KISEQGLKELKNEIILFSKLQHRN 444
           FS  +++G G FG VY    + + + +A+K++S   K S +  +++  E+    KL+H N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
            ++  GC +      L+ E+    + D     ++  + ++ +   H   G  +GL YLH 
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH---GALQGLAYLHS 172
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY-- 562
            +   +IHRD+KA N+LL +    K+ DFG A            N  VGT  +MAPE   
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 223
Query: 563 -ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
              +GQ+  K DV+S GI  +E+   K       + N ++ + H  +  +  + S     
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNESPALQSGHWSE 280
Query: 622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC 652
            F++  +             C+Q+ P+DRP 
Sbjct: 281 YFRNFVD------------SCLQKIPQDRPT 299

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 30/298 (10%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKEL--KNEIILFSK 439
           IA+  + F+  +++G+G FG V+KG     Q++   ++  + E   +    + EI + S+
Sbjct: 18  IADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ 77
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
                + K  G  + G +  +I E++   S      D  R    D  +   ++    +GL
Sbjct: 78  CDSSYVTKYYGSYLKGSKLWIIMEYLGGGS----ALDLLRAGPFDEFQIATMLKEILKGL 133
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH + +   IHRD+KA+NVLL +  + K++DFG+A      +T+   N  VGT  +MA
Sbjct: 134 DYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVGTPFWMA 188
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           PE      +  K+D++S GI  +E+  G+      H    L LI        +  P  L+
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI-------PKNNPPTLV 241
Query: 620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGYLAD 677
              F  SF   E I        C+ + P  RP       +L  + ++   K+  YL +
Sbjct: 242 -GDFTKSFK--EFIDA------CLNKDPSFRPTAKE---LLKHKFIVKNSKKTSYLTE 287

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 20  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 80  NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 133 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 76  NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 129 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 26  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 86  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 138
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 139 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMT 224

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 17  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 77  NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 130 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 76  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 129 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 381 TIANATD------NFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK--ISEQGLKELK 431
           +I +ATD      N+ + K +G+G F  V     +   +E+AVK + K  ++   L++L 
Sbjct: 3   SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 432 NEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI 491
            E+ +   L H N+VKL       +   L+ E+     +  ++    R K  +   +F  
Sbjct: 63  REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ 122
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NR 550
           I    +   Y HQ     I+HRDLKA N+LLD DMN KI+DFG +  F    T GN  + 
Sbjct: 123 IVSAVQ---YCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF----TVGNKLDT 172
Query: 551 VVGTYGYMAPEYASDGQFS-VKSDVFSFGILLLEIVSG 587
             G+  Y APE     ++   + DV+S G++L  +VSG
Sbjct: 173 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 29/276 (10%)
Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS---KISEQGLKELKNEIILFSK 439
           N   NF I KK+G G F  VY+   L D   +A+K++     +  +   +   EI L  +
Sbjct: 29  NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI--FDQERCKLLDWS--KRFHIICGT 495
           L H N++K     I   E  ++ E      L   I  F +++  + + +  K F  +C  
Sbjct: 89  LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
                  H  SR R++HRD+K +NV +      K+ D GL R F    T  ++  +VGT 
Sbjct: 149 LE-----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTP 200
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP 615
            YM+PE   +  ++ KSD++S G LL E+ + +    FY   +K+NL     K+     P
Sbjct: 201 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS--PFY--GDKMNLYSLCKKIEQCDYP 256
Query: 616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
               D       + +E +R   +  +C+   PE RP
Sbjct: 257 PLPSD-------HYSEELR--QLVNMCINPDPEKRP 283

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 76  NPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 129 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 22  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 82  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 134
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 135 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMT 220

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 79  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 132 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 76  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 129 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 78  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 131 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 79  NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 132 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 78  NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 131 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 79  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 132 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 10  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 70  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 122
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 123 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMT 208

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 79  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 132 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 16/228 (7%)
Query: 384 NATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKELK-NEIILFSKLQ 441
           +++  F   +KLG G +  VYKG        +A+K +   SE+G       EI L  +L+
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPN---KSLDS-FIFDQERCKLLDWSKRFHIICGTA 496
           H N+V+L    IH E KL L++EFM N   K +DS  + +  R   L+  K F       
Sbjct: 62  HENIVRLYDV-IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQ--WQLL 118
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           +GL + H++   +I+HRDLK  N+L+++    K+ DFGLARAFG      ++  V  T  
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLW 173
Query: 557 YMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
           Y AP+     + +S   D++S G +L E+++GK      + + +L LI
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 31  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 91  NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 23  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 83  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 136 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 23  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 82
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 83  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 142
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 143 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 199
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 200 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 34/271 (12%)
Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS---KISEQGLKELKNEIILFSKLQHRN 444
           FS  +++G G FG VY    + + + +A+K++S   K S +  +++  E+    KL+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
            ++  GC +      L+ E+    + D     ++  + ++ +   H   G  +GL YLH 
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH---GALQGLAYLHS 133
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY-- 562
            +   +IHRD+KA N+LL +    K+ DFG A            N  VGT  +MAPE   
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVIL 184
Query: 563 -ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
              +GQ+  K DV+S GI  +E+   K       + N ++ + H  +  +  + S     
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNESPALQSGHWSE 241
Query: 622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC 652
            F++  +             C+Q+ P+DRP 
Sbjct: 242 YFRNFVD------------SCLQKIPQDRPT 260

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D  ++ K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 27  DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFIFDQ--ERCKLLDWSKRF----HI 491
              H N+V LLG C   G   ++I EF    +L +++  +  E     D  K F    H+
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 492 IC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
           IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D      
Sbjct: 147 ICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                   +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 31  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 91  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRN 444
           N+ + K +G+G F  V     +   +E+A+K + K  ++   L++L  E+ +   L H N
Sbjct: 13  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VKL       +   LI E+     +  ++    R K  +   +F  I    +   Y HQ
Sbjct: 73  IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCHQ 129
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS 564
               RI+HRDLKA N+LLD DMN KI+DFG +  F      G  +   G+  Y APE   
Sbjct: 130 K---RIVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDTFCGSPPYAAPELFQ 183
Query: 565 DGQF-SVKSDVFSFGILLLEIVSG 587
             ++   + DV+S G++L  +VSG
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSG 207

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 38  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 97
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 98  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 157
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 158 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 214
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 48  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 107
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 108 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 167
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 168 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 224
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 46  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 41  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 101 NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 153
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 154 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMT 239

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 34/215 (15%)
Query: 395 LGEGGFGPVYKGTLADE---QEIAVKRLSK-ISEQGLKELKNEIILFSKL-QHRNLVKLL 449
           +GEG FG V K  +  +    + A+KR+ +  S+   ++   E+ +  KL  H N++ LL
Sbjct: 23  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 450 GCCIHGEEKLLIYEFMPNKSL-------------DSFIFDQERCKLLDWSKRFHIICGTA 496
           G C H     L  E+ P+ +L              +F         L   +  H     A
Sbjct: 83  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           RG+ YL Q    + IHRDL A N+L+ ++   KI+DFGL+R        G    V  T G
Sbjct: 143 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--------GQEVYVKKTMG 191
Query: 557 -----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                +MA E  +   ++  SDV+S+G+LL EIVS
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 72  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF--GGDETEGNTNRV 551
            G  YL ++     IHRD+ A N LL         KI DFG+AR     G   +G    +
Sbjct: 192 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 248
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 249 --PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 46/295 (15%)
Query: 389 FSINKKLGEGGFGPVYKGTLA----DEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHR 443
             I K +G G FG V  G L      E  +A+K L +  +++  ++  +E  +  +  H 
Sbjct: 31  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 90
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC------GTAR 497
           N++ L G     +  ++I E+M N SLD+F+   +         RF +I       G   
Sbjct: 91  NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND--------GRFTVIQLVGMLRGIGS 142
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT-YG 556
           G+ YL   S +  +HRDL A N+L++ ++  K+SDFG++R    D     T R       
Sbjct: 143 GMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 199
Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           + APE  +  +F+  SDV+S+GI++ E++S  +              R  W + N     
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE--------------RPYWDMSN----- 240
Query: 617 QLIDACFKDSFNLAEVIRC---IHIGLL-CVQQYPEDRPCMPSVILMLGSEIVLP 667
           Q +    ++ + L   + C   +H  +L C Q+   DRP    ++ ML   I  P
Sbjct: 241 QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNP 295

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRN 444
           N+ + K +G+G F  V     +   +E+A+K + K  ++   L++L  E+ +   L H N
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VKL       +   LI E+     +  ++    R K  +   +F  I    +   Y HQ
Sbjct: 76  IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCHQ 132
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS 564
               RI+HRDLKA N+LLD DMN KI+DFG +  F      G  +   G   Y APE   
Sbjct: 133 K---RIVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDAFCGAPPYAAPELFQ 186
Query: 565 DGQF-SVKSDVFSFGILLLEIVSG 587
             ++   + DV+S G++L  +VSG
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSG 210

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 10  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 70  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 121
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 122 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 46/295 (15%)
Query: 389 FSINKKLGEGGFGPVYKGTLA----DEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHR 443
             I K +G G FG V  G L      E  +A+K L +  +++  ++  +E  +  +  H 
Sbjct: 10  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC------GTAR 497
           N++ L G     +  ++I E+M N SLD+F+   +         RF +I       G   
Sbjct: 70  NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND--------GRFTVIQLVGMLRGIGS 121
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT-YG 556
           G+ YL   S +  +HRDL A N+L++ ++  K+SDFG++R    D     T R       
Sbjct: 122 GMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 178
Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           + APE  +  +F+  SDV+S+GI++ E++S  +              R  W + N     
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE--------------RPYWDMSN----- 219
Query: 617 QLIDACFKDSFNLAEVIRC---IHIGLL-CVQQYPEDRPCMPSVILMLGSEIVLP 667
           Q +    ++ + L   + C   +H  +L C Q+   DRP    ++ ML   I  P
Sbjct: 220 QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNP 274

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 34/215 (15%)
Query: 395 LGEGGFGPVYKGTLADE---QEIAVKRLSK-ISEQGLKELKNEIILFSKL-QHRNLVKLL 449
           +GEG FG V K  +  +    + A+KR+ +  S+   ++   E+ +  KL  H N++ LL
Sbjct: 33  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 450 GCCIHGEEKLLIYEFMPNKSL-------------DSFIFDQERCKLLDWSKRFHIICGTA 496
           G C H     L  E+ P+ +L              +F         L   +  H     A
Sbjct: 93  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           RG+ YL Q    + IHRDL A N+L+ ++   KI+DFGL+R        G    V  T G
Sbjct: 153 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--------GQEVYVKKTMG 201
Query: 557 -----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                +MA E  +   ++  SDV+S+G+LL EIVS
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 58  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 117
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 118 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 177
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+AR              + 
Sbjct: 178 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 234
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSK-ISEQGLKELKNEIILFSK 439
           +  ++ ++LG+G FG VY+G   D      E  +AVK +++  S +   E  NE  +   
Sbjct: 17  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR--------FHI 491
               ++V+LLG    G+  L++ E M +  L S++    R +  +   R          +
Sbjct: 77  FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 135
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G+ YL+     + +HRDL A N ++  D   KI DFG+ R     +      + 
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKG 192
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +    +MAPE   DG F+  SD++SFG++L EI S
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 9   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 69  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 120
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 121 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 49  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 108
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 109 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 168
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAF--GGDETEGNTNRV 551
            G  YL ++     IHRD+ A N LL         KI DFG+AR     G   +G    +
Sbjct: 169 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 225
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 226 --PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 46/295 (15%)
Query: 389 FSINKKLGEGGFGPVYKGTLA----DEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHR 443
             I K +G G FG V  G L      E  +A+K L +  +++  ++  +E  +  +  H 
Sbjct: 16  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC------GTAR 497
           N++ L G     +  ++I E+M N SLD+F+   +         RF +I       G   
Sbjct: 76  NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKND--------GRFTVIQLVGMLRGIGS 127
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT-YG 556
           G+ YL   S +  +HRDL A N+L++ ++  K+SDFG++R    D     T R       
Sbjct: 128 GMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 184
Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           + APE  +  +F+  SDV+S+GI++ E++S  +              R  W + N     
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE--------------RPYWDMSN----- 225
Query: 617 QLIDACFKDSFNLAEVIRC---IHIGLL-CVQQYPEDRPCMPSVILMLGSEIVLP 667
           Q +    ++ + L   + C   +H  +L C Q+   DRP    ++ ML   I  P
Sbjct: 226 QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNP 280

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 7   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 67  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 118
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 119
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 120 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 13  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A 
Sbjct: 73  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AE 125
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 126 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMT 211

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSK-ISEQGLKELKNEIILFSK 439
           +  ++ ++LG+G FG VY+G   D      E  +AVK +++  S +   E  NE  +   
Sbjct: 14  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 73
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR--------FHI 491
               ++V+LLG    G+  L++ E M +  L S++    R +  +   R          +
Sbjct: 74  FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 132
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G+ YL+     + +HRDL A N ++  D   KI DFG+ R     +      + 
Sbjct: 133 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKG 189
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +    +MAPE   DG F+  SD++SFG++L EI S
Sbjct: 190 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSK-ISEQGLKELKNEIILFSK 439
           +  ++ ++LG+G FG VY+G   D      E  +AVK +++  S +   E  NE  +   
Sbjct: 17  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR--------FHI 491
               ++V+LLG    G+  L++ E M +  L S++    R +  +   R          +
Sbjct: 77  FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 135
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G+ YL+     + +HRDL A N ++  D   KI DFG+ R     +      + 
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKG 192
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +    +MAPE   DG F+  SD++SFG++L EI S
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 141
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 17/209 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQ----EIAVKRL---SKISEQGLKELKNEIILFSK 439
           + + I  KLG GG   VY   LA++     ++A+K +    +  E+ LK  + E+   S+
Sbjct: 11  ERYKIVDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ 67
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           L H+N+V ++      +   L+ E++   +L  +I   E    L      +       G+
Sbjct: 68  LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGI 124
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            + H    +RI+HRD+K  N+L+D +   KI DFG+A+A   + +   TN V+GT  Y +
Sbjct: 125 KHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTVQYFS 180
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE A        +D++S GI+L E++ G+
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRL-SKISEQGLKELKNEIILF 437
           D   + K LGEG FG V         K       ++AVK L S  +E+ L +L +E+ + 
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLL-----------DW 485
             + +H+N++ LLG C       +I E+    +L  ++  +E   L              
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           S +  + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 143
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 143
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 141
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 93  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 144
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 95  KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 143
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 89  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 140
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 141
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 14  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 74  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 125
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 126 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 95  KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 93  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 144
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 145 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 143
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 89  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 140
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 141 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
            +++ + + LGEG  G V        E+ +AVK +  K +    + +K EI +   L H 
Sbjct: 5   VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VK  G    G  + L  E+     L   I         D  + FH +     G++YLH
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH 121
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE  
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGK 588
              +F  +  DV+S GI+L  +++G+
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 35  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 95  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 146
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 147 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 92  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 143
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 144 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D   + K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRF-- 489
              H N+V LLG C   G   ++I EF    +L +++      F   +    D  K F  
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 490 --HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
             H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                       +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 387 DNFSINKKLGEGGFGP-VYKGTLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F   V    LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 30  EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTAR 497
              VKL       E+      +  N  L  +I     FD E C       RF+       
Sbjct: 90  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-ETCT------RFYT-AEIVS 141
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y
Sbjct: 142 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           ++PE  ++      SD+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 105/226 (46%), Gaps = 38/226 (16%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           DN  + + +G G +G VYKG+L DE+ +AVK  S  + Q     KN I     ++H N+ 
Sbjct: 13  DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIA 70
Query: 447 KLLGCCIHGEEK---------LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           +     I G+E+         LL+ E+ PN SL  ++         DW     +     R
Sbjct: 71  RF----IVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTR 122
Query: 498 GLLYLHQD------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD------ETE 545
           GL YLH +       +  I HRDL + NVL+  D    ISDFGL+    G+      E +
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 546 GNTNRVVGTYGYMAPEYAS------DGQFSVKS-DVFSFGILLLEI 584
                 VGT  YMAPE         D + ++K  D+++ G++  EI
Sbjct: 183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 33/229 (14%)
Query: 387 DNFSINKKLGEGGFGPVYK----GTLADE--QEIAVKRLSKISEQGLK-ELKNEIILFSK 439
           +N    + +GEG FG V++    G L  E    +AVK L + +   ++ + + E  L ++
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD---QERCKL-------------- 482
             + N+VKLLG C  G+   L++E+M    L+ F+        C L              
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 483 ----LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR- 537
               L  +++  I    A G+ YL   S  + +HRDL   N L+ ++M  KI+DFGL+R 
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            +  D  + + N  +    +M PE     +++ +SDV+++G++L EI S
Sbjct: 224 IYSADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRL-SKISEQGLKELKNEIILF 437
           D   + K LGEG FG V         K       ++AVK L S  +E+ L +L +E+ + 
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           ++         
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           S +  + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 70  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 181
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 234

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRL-SKISEQGLKELKNEIILF 437
           D   + K LGEG FG V         K       ++AVK L S  +E+ L +L +E+ + 
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           ++         
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           S +  + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 133 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D   + K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRF-- 489
              H N+V LLG C   G   ++I EF    +L +++      F   +    D  K F  
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 490 --HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
             H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                       +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRL-SKISEQGLKELKNEIILF 437
           D   + K LGEG FG V         K       ++AVK L S  +E+ L +L +E+ + 
Sbjct: 17  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           ++         
Sbjct: 77  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           S +  + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 137 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRL-SKISEQGLKELKNEIILF 437
           D   + K LGEG FG V         K       ++AVK L S  +E+ L +L +E+ + 
Sbjct: 21  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           ++         
Sbjct: 81  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           S +  + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 141 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRL-SKISEQGLKELKNEIILF 437
           D   + K LGEG FG V         K       ++AVK L S  +E+ L +L +E+ + 
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           ++         
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           S +  + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D   + K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRF-- 489
              H N+V LLG C   G   ++I EF    +L +++      F   +    D  K F  
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 490 --HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
             H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                       +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K L  G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 23  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 83  NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 136 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRL-SKISEQGLKELKNEIILF 437
           D   + K LGEG FG V         K       ++AVK L S  +E+ L +L +E+ + 
Sbjct: 20  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           ++         
Sbjct: 80  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           S +  + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 140 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 62  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAP 173
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 228

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 22  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 82  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 142 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 63  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 174
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   +I+DFGLAR     +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 20  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 80  NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFG A+  G +E E +         +
Sbjct: 133 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRL-SKISEQGLKELKNEIILF 437
           D   + K LGEG FG V         K       ++AVK L S  +E+ L +L +E+ + 
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           ++         
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           S +  + C    ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 189 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL 440
           N ++ + LG G FG VY+G ++         ++AVK L ++ SEQ   +   E ++ SK 
Sbjct: 32  NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTA 496
            H+N+V+ +G  +    + ++ E M    L SF+ +      +   L      H+    A
Sbjct: 92  NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVG 553
            G  YL ++     IHRD+ A N LL         KI DFG+A+              + 
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML 208
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K L  G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 16  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 76  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 129 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 27  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 87  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 147 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D   + K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRF-- 489
              H N+V LLG C   G   ++I EF    +L +++      F   +    D  K F  
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 490 --HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
             H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                       +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 24  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I E+    +L  ++           +D  R      
Sbjct: 84  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 144 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
              + + +G G FG V K      +++A+K++   SE+  K    E+   S++ H N+VK
Sbjct: 10  EIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVK 66
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L G C++     L+ E+    SL + +   E       +         ++G+ YLH    
Sbjct: 67  LYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 508 LRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
             +IHRDLK  N+LL       KI DFG A      +T    N+  G+  +MAPE     
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAAWMAPEVFEGS 179
Query: 567 QFSVKSDVFSFGILLLEIVSGKK 589
            +S K DVFS+GI+L E+++ +K
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRK 202

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 70  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 181
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 234

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 67  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 178
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 231

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
              + + +G G FG V K      +++A+K++   SE+  K    E+   S++ H N+VK
Sbjct: 9   EIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVK 65
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L G C++     L+ E+    SL + +   E       +         ++G+ YLH    
Sbjct: 66  LYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 508 LRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
             +IHRDLK  N+LL       KI DFG A      +T    N+  G+  +MAPE     
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAAWMAPEVFEGS 178
Query: 567 QFSVKSDVFSFGILLLEIVSGKK 589
            +S K DVFS+GI+L E+++ +K
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRK 201

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 63  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 174
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 63  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 174
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+  L +  S +  KE+ +E  + + + 
Sbjct: 50  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 110 NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 162
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 163 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMT 248

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 62  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 173
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 62  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 173
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 78  NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFG A+  G +E E +         +
Sbjct: 131 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K L  G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 23  EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 83  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFGLA+  G +E E +         +
Sbjct: 136 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 388 NFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRN 444
           N+ + K +G+G F  V     +   +E+AVK + K  ++   L++L  E+ +   L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VKL       +   L+ E+     +  ++    R K  +   +F  I    +   Y HQ
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQ 131
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGYMAPEYA 563
                I+HRDLKA N+LLD DMN KI+DFG +  F    T GN  +   G+  Y APE  
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELF 184
Query: 564 SDGQFS-VKSDVFSFGILLLEIVSG 587
              ++   + DV+S G++L  +VSG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 24/210 (11%)
Query: 395 LGEGGFGPVYKGTLADE---QEIAVKRLSK-ISEQGLKELKNEIILFSKL-QHRNLVKLL 449
           +GEG FG V K  +  +    + A+KR+ +  S+   ++   E+ +  KL  H N++ LL
Sbjct: 30  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 450 GCCIHGEEKLLIYEFMPNKSL-------------DSFIFDQERCKLLDWSKRFHIICGTA 496
           G C H     L  E+ P+ +L              +F         L   +  H     A
Sbjct: 90  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           RG+ YL Q    + IHR+L A N+L+ ++   KI+DFGL+R   G E             
Sbjct: 150 RGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVR 203
Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +MA E  +   ++  SDV+S+G+LL EIVS
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 78  NPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFG A+  G +E E +         +
Sbjct: 131 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSK-ISEQGLKELKNEIILFSK 439
           +  ++ ++LG+G FG VY+G   D      E  +AVK +++  S +   E  NE  +   
Sbjct: 17  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR--------FHI 491
               ++V+LLG    G+  L++ E M +  L S++    R +  +   R          +
Sbjct: 77  FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 135
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G+ YL+     + +HRDL A N ++  D   KI DFG+ R     +      + 
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 192
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +    +MAPE   DG F+  SD++SFG++L EI S
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 389 FSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHR 443
             I + +G G FG V  G L      +  +A+K L    +E+  ++   E  +  +  H 
Sbjct: 45  IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+V L G    G+  +++ EFM N +LD+F+   +        +   ++ G A G+ YL 
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD--GQFTVIQLVGMLRGIAAGMRYL- 161
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG------Y 557
             + +  +HRDL A N+L++ ++  K+SDFGL+R       E +   V  T G      +
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI-----EDDPEAVYTTTGGKIPVRW 214
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            APE     +F+  SDV+S+GI++ E++S
Sbjct: 215 TAPEAIQYRKFTSASDVWSYGIVMWEVMS 243

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 76  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFG A+  G +E E +         +
Sbjct: 129 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVK---RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+      RL   +E        EI L  +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 63  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 174
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVK---RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+      RL   +E        EI L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 62  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 173
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 388 NFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRN 444
           N+ + K +G+G F  V     +   +E+AVK + K  ++   L++L  E+ +   L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VKL       +   L+ E+     +  ++    R K  +   +F  I    +   Y HQ
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQ 131
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGYMAPEYA 563
                I+HRDLKA N+LLD DMN KI+DFG +  F    T GN  +   G+  Y APE  
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELF 184
Query: 564 SDGQFS-VKSDVFSFGILLLEIVSG 587
              ++   + DV+S G++L  +VSG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 78  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFG A+  G +E E +         +
Sbjct: 131 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D   + K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRF-- 489
              H N+V LLG C   G   ++I EF    +L +++      F   +    D  K F  
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 490 --HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
             H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                       +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 204 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + + 
Sbjct: 23  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTAR 497
           + ++ +LLG C+    +L I + MP   L  ++ + +       LL+W  +       A+
Sbjct: 83  NPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ YL +D RL  +HRDL A NVL+    + KI+DFG A+  G +E E +         +
Sbjct: 136 GMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E      ++ +SDV+S+G+ + E+++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLV 446
           K LG G FG VYKG    + E     +A+K L +  S +  KE+ +E  + + +    + 
Sbjct: 23  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTARGLLYL 502
           +LLG C+    +L + + MP   L   + +         LL+W  +       A+G+ YL
Sbjct: 83  RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYL 135
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
                +R++HRDL A NVL+    + KI+DFGLAR    DETE + +       +MA E 
Sbjct: 136 ED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 563 ASDGQFSVKSDVFSFGILLLEIVS 586
               +F+ +SDV+S+G+ + E+++
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT 216

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 63  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 174
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 26/222 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D  ++ K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 28  DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFIFDQERCKLL------DWSKRF-- 489
              H N+V LLG C   G   ++I EF    +L +++   +R + +      D  K F  
Sbjct: 88  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-RSKRNEFVPYKTPEDLYKDFLT 146
Query: 490 --HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
             H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                       +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 25/207 (12%)
Query: 398 GGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE- 456
           G FG V+K  L ++  +AVK      +Q  +  + EI     ++H NL++ +     G  
Sbjct: 26  GRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 457 ---EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-------- 505
              E  LI  F    SL  ++    +  ++ W++  H+    +RGL YLH+D        
Sbjct: 84  LEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
            +  I HRD K+ NVLL  D+   ++DFGLA  F   +  G+T+  VGT  YMAPE   +
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL-E 198
Query: 566 GQFSVKSDVF------SFGILLLEIVS 586
           G  + + D F      + G++L E+VS
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVS 225

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D   + K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRF-- 489
              H N+V LLG C   G   ++I EF    +L +++      F   +    D  K F  
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 490 --HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
             H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                       +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSK-ISEQGLKELKNEIILFSK 439
           +  ++ ++LG+G FG VY+G   D      E  +AVK +++  S +   E  NE  +   
Sbjct: 16  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR--------FHI 491
               ++V+LLG    G+  L++ E M +  L S++    R +  +   R          +
Sbjct: 76  FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 134
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G+ YL+     + +HRDL A N ++  D   KI DFG+ R     +      + 
Sbjct: 135 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 191
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +    +MAPE   DG F+  SD++SFG++L EI S
Sbjct: 192 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D   + K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRF-- 489
              H N+V LLG C   G   ++I EF    +L +++      F   +    D  K F  
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 490 --HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
             H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 138 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                       +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRN 444
           ++  + +++G G FG V+ G L AD   +AVK   +     LK +   E  +  +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +V+L+G C   +   ++ E +  +  D   F +     L       ++   A G+ YL  
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGNTNRVVGTYGYMAPEY 562
                 IHRDL A N L+ +    KISDFG++R  A G     G   +V     + APE 
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV--PVKWTAPEA 286
Query: 563 ASDGQFSVKSDVFSFGILLLEIVS 586
            + G++S +SDV+SFGILL E  S
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D   + K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 64  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRF-- 489
              H N+V LLG C   G   ++I EF    +L +++      F   +    D  K F  
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 490 --HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
             H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 184 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 240
Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                       +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSK-ISEQGLKELKNEIILFSK 439
           +  ++ ++LG+G FG VY+G   D      E  +AVK +++  S +   E  NE  +   
Sbjct: 17  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR--------FHI 491
               ++V+LLG    G+  L++ E M +  L S++    R +  +   R          +
Sbjct: 77  FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 135
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G+ YL+     + +HRDL A N ++  D   KI DFG+ R            + 
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKG 192
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +    +MAPE   DG F+  SD++SFG++L EI S
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 388 NFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRN 444
           N+ + K +G+G F  V     +   +E+AV+ + K  ++   L++L  E+ +   L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VKL       +   L+ E+     +  ++    R K  +   +F  I    +   Y HQ
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQ 131
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGYMAPEYA 563
                I+HRDLKA N+LLD DMN KI+DFG +  F    T GN  +   G+  Y APE  
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDEFCGSPPYAAPELF 184
Query: 564 SDGQFS-VKSDVFSFGILLLEIVSG 587
              ++   + DV+S G++L  +VSG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 388 NFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRN 444
           N+ + K +G+G F  V     +   +E+AVK + K  ++   L++L  E+ +   L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VKL       +   L+ E+     +  ++    R K  +   +F  I    +   Y HQ
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQ 131
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGYMAPEYA 563
                I+HRDLKA N+LLD DMN KI+DFG +  F    T GN  +   G   Y APE  
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPELF 184
Query: 564 SDGQFS-VKSDVFSFGILLLEIVSG 587
              ++   + DV+S G++L  +VSG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L +F+ D      +        +    +GL 
Sbjct: 64  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 175
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 230

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I  +    +L  ++           +D  R      
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 20/233 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           DNF    K+GEG  G V   T+ +  + +AVK++    +Q  + L NE+++    QH N+
Sbjct: 32  DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V++    + G+E  ++ EF+   +L   +        ++  +   +     + L  LH  
Sbjct: 89  VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 144
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
               +IHRD+K+ ++LL  D   K+SDFG       +        +VGT  +MAPE  S 
Sbjct: 145 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISR 199
Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
             +  + D++S GI+++E+V G+     Y ++  L     A K+  + +P +L
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRL 245

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 20/233 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           DNF    K+GEG  G V   T+ +  + +AVK++    +Q  + L NE+++    QH N+
Sbjct: 34  DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V++    + G+E  ++ EF+   +L   +        ++  +   +     + L  LH  
Sbjct: 91  VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 146
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
               +IHRD+K+ ++LL  D   K+SDFG       +        +VGT  +MAPE  S 
Sbjct: 147 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISR 201
Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
             +  + D++S GI+++E+V G+     Y ++  L     A K+  + +P +L
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRL 247

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 388 NFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRN 444
           N+ + K +G+G F  V     +   +E+AV+ + K  ++   L++L  E+ +   L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VKL       +   L+ E+     +  ++    R K  +   +F  I    +   Y HQ
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCHQ 131
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGYMAPEYA 563
                I+HRDLKA N+LLD DMN KI+DFG +  F    T GN  +   G+  Y APE  
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELF 184
Query: 564 SDGQFS-VKSDVFSFGILLLEIVSG 587
              ++   + DV+S G++L  +VSG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 20/233 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           DNF    K+GEG  G V   T+ +  + +AVK++    +Q  + L NE+++    QH N+
Sbjct: 23  DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V++    + G+E  ++ EF+   +L   +        ++  +   +     + L  LH  
Sbjct: 80  VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 135
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
               +IHRD+K+ ++LL  D   K+SDFG       +        +VGT  +MAPE  S 
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISR 190
Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
             +  + D++S GI+++E+V G+     Y ++  L     A K+  + +P +L
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRL 236

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 20/233 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           DNF    K+GEG  G V   T+    + +AVK++    +Q  + L NE+++    QH N+
Sbjct: 154 DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V++    + G+E  ++ EF+   +L   +        ++  +   +     + L  LH  
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 266
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
               +IHRD+K+ ++LL  D   K+SDFG       +        +VGT  +MAPE  S 
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISR 321
Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
             +  + D++S GI+++E+V G+     Y ++  L     A K+  + +P +L
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRL 367

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 20/233 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           DNF    K+GEG  G V   T+    + +AVK++    +Q  + L NE+++    QH N+
Sbjct: 77  DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V++    + G+E  ++ EF+   +L   +        ++  +   +     + L  LH  
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 189
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
               +IHRD+K+ ++LL  D   K+SDFG       +        +VGT  +MAPE  S 
Sbjct: 190 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISR 244
Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
             +  + D++S GI+++E+V G+     Y ++  L     A K+  + +P +L
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRL 290

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 20/233 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           DNF    K+GEG  G V   T+ +  + +AVK++    +Q  + L NE+++    QH N+
Sbjct: 27  DNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V++    + G+E  ++ EF+   +L   +        ++  +   +     + L  LH  
Sbjct: 84  VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 139
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
               +IHRD+K+ ++LL  D   K+SDFG       +        +VGT  +MAPE  S 
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKXLVGTPYWMAPELISR 194
Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
             +  + D++S GI+++E+V G+     Y ++  L     A K+  + +P +L
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLK----AMKMIRDNLPPRL 240

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRN 444
           ++  + +++G G FG V+ G L AD   +AVK   +     LK +   E  +  +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +V+L+G C   +   ++ E +  +  D   F +     L       ++   A G+ YL  
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGNTNRVVGTYGYMAPEY 562
                 IHRDL A N L+ +    KISDFG++R  A G     G   +V     + APE 
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV--PVKWTAPEA 286
Query: 563 ASDGQFSVKSDVFSFGILLLEIVS 586
            + G++S +SDV+SFGILL E  S
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 124/243 (51%), Gaps = 24/243 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMP---NKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           H N+VKLL   IH E KL L++EF+     K +D+         L+  S  F ++    +
Sbjct: 64  HPNIVKLLDV-IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-SYLFQLL----Q 117
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           GL + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y
Sbjct: 118 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWY 172
Query: 558 MAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
            APE     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P 
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 227
Query: 617 QLI 619
           +++
Sbjct: 228 EVV 230

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 64  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 175
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 230

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 63  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 174
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 229

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D   + K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 29  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFI------FDQERCKLLDWSKRF-- 489
              H N+V LLG C   G   ++I EF    +L +++      F   +    D  K F  
Sbjct: 89  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 490 --HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
             H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 149 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 205
Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                       +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 206 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 26/223 (11%)
Query: 387 DNFSINKKLGEGGFGPVY--------KGTLADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V         K    +   +AVK L    +E+ L +L +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDW 485
             + +H+N++ LLG C       +I  +    +L  ++           +D  R      
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 486 SKRFHIICG--TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           + +  + C    ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR     +
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               T        +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 16/208 (7%)
Query: 387 DNFSI-NKKLGEGGFGPVYKGTL---ADEQEIAVKRLSKISEQG-LKELKNEIILFSKLQ 441
           DN  I + +LG G FG V +G       + ++A+K L + +E+   +E+  E  +  +L 
Sbjct: 9   DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD 68
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF-DQERCKLLDWSKRFHIICGTARGLL 500
           +  +V+L+G C   E  +L+ E      L  F+   +E   + + ++  H +   + G+ 
Sbjct: 69  NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMK 124
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYM 558
           YL + +    +HRDL A NVLL      KISDFGL++A G D++   T R  G +   + 
Sbjct: 125 YLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWY 180
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVS 586
           APE  +  +FS +SDV+S+G+ + E +S
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALS 208

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 61  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 172
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSK-ISEQGLKELKNEIILFSK 439
           +  ++ ++LG+G FG VY+G   D      E  +AVK +++  S +   E  NE  +   
Sbjct: 17  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR--------FHI 491
               ++V+LLG    G+  L++ E M +  L S++    R +  +   R          +
Sbjct: 77  FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 135
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G+ YL+     + +HR+L A N ++  D   KI DFG+ R     +      + 
Sbjct: 136 AAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 192
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +    +MAPE   DG F+  SD++SFG++L EI S
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 64  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 175
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 230

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 124/243 (51%), Gaps = 24/243 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMP---NKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           H N+VKLL   IH E KL L++EF+     K +D+         L+  S  F ++    +
Sbjct: 62  HPNIVKLLDV-IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-SYLFQLL----Q 115
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           GL + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y
Sbjct: 116 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWY 170
Query: 558 MAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
            APE     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P 
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPD 225
Query: 617 QLI 619
           +++
Sbjct: 226 EVV 228

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 63  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 174
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 229

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 105/218 (48%), Gaps = 21/218 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D  ++ K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 27  DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFIFDQ--ERCKLLDWSKRF----HI 491
              H N+V LLG C   G   ++I EF    +L +++  +  E     D  K F    H+
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 492 IC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
           I      A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D      
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                   +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 19/215 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSK-ISEQGLKELKNEIILFSK 439
           +  ++ ++LG+G FG VY+G   D      E  +AVK +++  S +   E  NE  +   
Sbjct: 18  EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 77
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR--------FHI 491
               ++V+LLG    G+  L++ E M +  L S++    R +  +   R          +
Sbjct: 78  FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQM 136
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
               A G+ YL+     + +HR+L A N ++  D   KI DFG+ R     +      + 
Sbjct: 137 AAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 193
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +    +MAPE   DG F+  SD++SFG++L EI S
Sbjct: 194 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 61  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKDFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 172
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 383 ANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKEL--KNEIILFSKL 440
           A+  + F+  +K+G+G FG V+KG     Q++   ++  + E   +    + EI + S+ 
Sbjct: 18  ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
               + K  G  +   +  +I E++   S      D      LD ++   I+    +GL 
Sbjct: 78  DSPYVTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLD 133
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           YLH + +   IHRD+KA+NVLL +    K++DFG+A      +T+   N  VGT  +MAP
Sbjct: 134 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAP 188
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
           E      +  K+D++S GI  +E+  G+      H    L LI
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 393 KKLGEGGFGPVY------KGTLADEQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNL 445
           + LGEG FG V       +G    EQ +AVK L   S    + +LK EI +   L H N+
Sbjct: 15  RDLGEGHFGKVELCRYDPEGDNTGEQ-VAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 446 VKLLGCCIH--GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI-ICGTARGLLYL 502
           VK  G C    G    LI EF+P+ SL  ++   +    L    ++ + IC   +G+ YL
Sbjct: 74  VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC---KGMDYL 130
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT--NRVVGTYGYMAP 560
              SR + +HRDL A NVL++ +   KI DFGL +A   D+       +R    + Y AP
Sbjct: 131 --GSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-AP 186
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVS 586
           E     +F + SDV+SFG+ L E+++
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT 212

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 5   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 65  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 121
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 176
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 231

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 61  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 172
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 63  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 174
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 229

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 61  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 172
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 393 KKLGEGGFGPVY------KGTLADEQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNL 445
           + LGEG FG V       +G    EQ +AVK L   S    + +LK EI +   L H N+
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQ-VAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 446 VKLLGCCIH--GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI-ICGTARGLLYL 502
           VK  G C    G    LI EF+P+ SL  ++   +    L    ++ + IC   +G+ YL
Sbjct: 86  VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC---KGMDYL 142
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT--NRVVGTYGYMAP 560
              SR + +HRDL A NVL++ +   KI DFGL +A   D+       +R    + Y AP
Sbjct: 143 --GSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-AP 198
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVS 586
           E     +F + SDV+SFG+ L E+++
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 62  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 173
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 228

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 62  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 173
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 228

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 62  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y APE 
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEI 173
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 62  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y APE 
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEI 173
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL 
Sbjct: 61  HPNIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 172
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 227

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 39/256 (15%)
Query: 387 DNFSINKKLGEGGFGPVYKGT------LADEQEIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +N    K LG G FG V   T           ++AVK L + ++   +E L +E+ + ++
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----------FDQERCKLLDWSK 487
           L  H N+V LLG C       LI+E+     L +++            + E  K L+  +
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 488 RFHIIC---------GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
             +++            A+G+ +L   S    +HRDL A NVL+      KI DFGLAR 
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 539 FGGDE---TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKN--RGF 593
              D      GN    V    +MAPE   +G +++KSDV+S+GILL EI S   N   G 
Sbjct: 222 IMSDSNYVVRGNARLPVK---WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278
Query: 594 YHSDNKLNLIRHAWKL 609
               N   LI++ +K+
Sbjct: 279 PVDANFYKLIQNGFKM 294

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 394 KLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCC 452
           K+GEG  G V   T     +++AVK++    +Q  + L NE+++     H N+V +    
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
           + G+E  ++ EF+   +L   +        ++  +   +     R L YLH      +IH
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKS 572
           RD+K+ ++LL  D   K+SDFG       +  +     +VGT  +MAPE  S   +  + 
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 573 DVFSFGILLLEIVSGK 588
           D++S GI+++E++ G+
Sbjct: 223 DIWSLGIMVIEMIDGE 238

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 122/238 (51%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++E + ++ L +F+ D      +        +    +GL + 
Sbjct: 62  NIVKLLDV-IHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG       T+ VV T  Y APE 
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEI 173
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 226

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 18/238 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N+VKLL   IH E KL L++EF+ ++ L  F+ D      +        +    +GL + 
Sbjct: 64  NIVKLLDV-IHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y APE 
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEI 175
Query: 563 ASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
               + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 228

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 113/241 (46%), Gaps = 15/241 (6%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKEL--KNEIILFSKLQHRNLV 446
           F+   ++G+G FG VYKG     +E+   ++  + E   +    + EI + S+     + 
Sbjct: 21  FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +  G  +   +  +I E++   S      D  +   L+ +    I+    +GL YLH + 
Sbjct: 81  RYFGSYLKSTKLWIIMEYLGGGS----ALDLLKPGPLEETYIATILREILKGLDYLHSE- 135
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
             R IHRD+KA+NVLL +  + K++DFG+A      +T+   N  VGT  +MAPE     
Sbjct: 136 --RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 191
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS----QLIDAC 622
            +  K+D++S GI  +E+  G+      H    L LI        EG  S    + ++AC
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEAC 251
Query: 623 F 623
Sbjct: 252 L 252

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 23/220 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKG------TLADEQEIAVKRLSK-ISEQGLKELKNEI-ILFS 438
           D   + K LG G FG V +         A  + +AVK L +  +    + L +E+ IL  
Sbjct: 29  DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 439 KLQHRNLVKLLGCCIH-GEEKLLIYEFMPNKSLDSFIFDQER----CKLLDWSKRF---- 489
              H N+V LLG C   G   ++I EF    +L +++  +       K  D  K F    
Sbjct: 89  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 490 HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 546
           H+I      A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D    
Sbjct: 149 HLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                     +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ +  L  F+ D      +        +    +GL 
Sbjct: 64  HPNIVKLLDV-IHTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 175
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 230

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKEL--KNEIILFSKLQHRNLV 446
           F+  +K+G+G FG V+KG     Q++   ++  + E   +    + EI + S+     + 
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           K  G  +   +  +I E++   S      D      LD ++   I+    +GL YLH + 
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           +   IHRD+KA+NVLL +    K++DFG+A      +T+   N  VGT  +MAPE     
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
            +  K+D++S GI  +E+  G+      H    L LI
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKEL--KNEIILFSKLQHRNLV 446
           F+  +K+G+G FG V+KG     Q++   ++  + E   +    + EI + S+     + 
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           K  G  +   +  +I E++   S      D      LD ++   I+    +GL YLH + 
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           +   IHRD+KA+NVLL +    K++DFG+A      +T+   N  VGT  +MAPE     
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
            +  K+D++S GI  +E+  G+      H    L LI
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 18/240 (7%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N+VKLL   IH E KL L++EF+ +  L  F+ D      +        +    +GL 
Sbjct: 63  HPNIVKLLDV-IHTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV T  Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 174
Query: 561 EYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           E     + +S   D++S G +  E+V+    R  +  D++++ +   ++    G P +++
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--TLGTPDEVV 229

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 13/203 (6%)
Query: 392 NKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISE-QGLKELKNEIILFSKLQHRNLV 446
           ++ +G+G FG VY G   D+ +     A+K LS+I+E Q ++    E +L   L H N++
Sbjct: 26  DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 447 KLLGCCIHGEE-KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            L+G  +  E    ++  +M +  L  FI   +R   +     F +    ARG+ YL + 
Sbjct: 86  ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYLAEQ 143
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGNTNRVVGTYGYMAPEYA 563
              + +HRDL A N +LD+    K++DFGLAR     E  +            + A E  
Sbjct: 144 ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +F+ KSDV+SFG+LL E+++
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLT 223

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKEL--KNEIILFSKLQHRNLV 446
           F+  +K+G+G FG V+KG     Q++   ++  + E   +    + EI + S+     + 
Sbjct: 29  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           K  G  +   +  +I E++   S      D      LD ++   I+    +GL YLH + 
Sbjct: 89  KYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           +   IHRD+KA+NVLL +    K++DFG+A      +T+   N  VGT  +MAPE     
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQS 199
Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
            +  K+D++S GI  +E+  G+      H    L LI
Sbjct: 200 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 236

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 34/248 (13%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVK--RLSKISEQGLKELKNEIILFSKLQ 441
           + +NF   +K+GEG +G VYK       E+ A+K  RL   +E        EI L  +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--------I 492
           H N+VKLL   IH E KL L++E +          DQ+  K +D S    I        +
Sbjct: 64  HPNIVKLLDV-IHTENKLYLVFEHV----------DQDLKKFMDASALTGIPLPLIKSYL 112
Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
               +GL + H     R++HRDLK  N+L++ +   K++DFGLARAFG        + VV
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV 168
Query: 553 GTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN 611
            T  Y APE     + +S   D++S G +  E+V+    R  +  D++++ +   ++   
Sbjct: 169 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT---RRALFPGDSEIDQLFRIFR--T 222
Query: 612 EGMPSQLI 619
            G P +++
Sbjct: 223 LGTPDEVV 230

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 388 NFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRN 444
           N+ + K +G+G F  V     +   +E+AVK + K  ++   L++L  E+ +   L H N
Sbjct: 8   NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VKL       +   L+ E+     +  ++      K  +   +F  I    +   Y HQ
Sbjct: 68  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ---YCHQ 124
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGYMAPEYA 563
                I+HRDLKA N+LLD DMN KI+DFG +  F    T GN  +   G+  Y APE  
Sbjct: 125 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELF 177
Query: 564 SDGQFS-VKSDVFSFGILLLEIVSG 587
              ++   + DV+S G++L  +VSG
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSG 202

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 16/208 (7%)
Query: 387 DNFSI-NKKLGEGGFGPVYKGTL---ADEQEIAVKRLSKISEQG-LKELKNEIILFSKLQ 441
           DN  I + +LG G FG V +G       + ++A+K L + +E+   +E+  E  +  +L 
Sbjct: 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD 394
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIF-DQERCKLLDWSKRFHIICGTARGLL 500
           +  +V+L+G C   E  +L+ E      L  F+   +E   + + ++  H +   + G+ 
Sbjct: 395 NPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV---SMGMK 450
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY--GYM 558
           YL + +    +HR+L A NVLL      KISDFGL++A G D++   T R  G +   + 
Sbjct: 451 YLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY-YTARSAGKWPLKWY 506
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVS 586
           APE  +  +FS +SDV+S+G+ + E +S
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALS 534

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 105/209 (50%), Gaps = 28/209 (13%)
Query: 393 KKLGEGGFGPV----YKGTLADEQE-IAVKRL-SKISEQGLKELKNEIILFSKLQHRNLV 446
           + LGEG FG V    Y  T     E +AVK L +    Q     K EI +   L H +++
Sbjct: 20  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 447 KLLGCCI-HGEEKL-LIYEFMPNKSLDSFIFDQE--RCKLLDWSKRFHIICGTARGLLYL 502
           K  GCC   GE+ L L+ E++P  SL  ++        +LL ++++   IC    G+ YL
Sbjct: 80  KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---IC---EGMAYL 133
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----Y 557
           H       IHR+L A NVLLD D   KI DFGLA+A      EG+    V   G     +
Sbjct: 134 HSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPVFW 186
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            APE   + +F   SDV+SFG+ L E+++
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 31/208 (14%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +K+GEG +G VYK      +  A+K  RL K  E        EI +  +L+H N+VKL  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 451 CCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLD---------WSKRFHIICGTARGLL 500
             IH +++L L++E +          DQ+  KLLD          +K F  +     G+ 
Sbjct: 68  V-IHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIA 114
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           Y H     R++HRDLK  N+L++++   KI+DFGLARAF G      T+ VV T  Y AP
Sbjct: 115 YCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAP 169
Query: 561 EY-ASDGQFSVKSDVFSFGILLLEIVSG 587
           +      ++S   D++S G +  E+V+G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 31/208 (14%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +K+GEG +G VYK      +  A+K  RL K  E        EI +  +L+H N+VKL  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 451 CCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLD---------WSKRFHIICGTARGLL 500
             IH +++L L++E +          DQ+  KLLD          +K F  +     G+ 
Sbjct: 68  V-IHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIA 114
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           Y H     R++HRDLK  N+L++++   KI+DFGLARAF G      T+ VV T  Y AP
Sbjct: 115 YCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAP 169
Query: 561 EY-ASDGQFSVKSDVFSFGILLLEIVSG 587
           +      ++S   D++S G +  E+V+G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 105/209 (50%), Gaps = 28/209 (13%)
Query: 393 KKLGEGGFGPV----YKGTLADEQE-IAVKRL-SKISEQGLKELKNEIILFSKLQHRNLV 446
           + LGEG FG V    Y  T     E +AVK L +    Q     K EI +   L H +++
Sbjct: 20  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 447 KLLGCCI-HGEEKL-LIYEFMPNKSLDSFIFDQE--RCKLLDWSKRFHIICGTARGLLYL 502
           K  GCC   GE+ L L+ E++P  SL  ++        +LL ++++   IC    G+ YL
Sbjct: 80  KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---IC---EGMAYL 133
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----Y 557
           H       IHR+L A NVLLD D   KI DFGLA+A      EG+    V   G     +
Sbjct: 134 HAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPVFW 186
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            APE   + +F   SDV+SFG+ L E+++
Sbjct: 187 YAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 22/212 (10%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA-RAFGGDETEGNTNRVVGTYG 556
            L Y H     R+IHRD+K  N+LL      KI+DFG +  A     TE     + GT  
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTE-----LCGTLD 171
Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           Y+ PE         K D++S G+L  E + GK
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 31/208 (14%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           +K+GEG +G VYK      +  A+K  RL K  E        EI +  +L+H N+VKL  
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 451 CCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLD---------WSKRFHIICGTARGLL 500
             IH +++L L++E +          DQ+  KLLD          +K F  +     G+ 
Sbjct: 68  V-IHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNGIA 114
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           Y H     R++HRDLK  N+L++++   KI+DFGLARAF G      T+ +V T  Y AP
Sbjct: 115 YCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRAP 169
Query: 561 EY-ASDGQFSVKSDVFSFGILLLEIVSG 587
           +      ++S   D++S G +  E+V+G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRN 444
           N+ + K +G+G F  V     +   +E+AVK + K  ++   L++L  E+ +   L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VKL       +   L+ E+     +  ++    R K  +   +F  I    +   Y HQ
Sbjct: 75  IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ---YCHQ 131
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGYMAPEYA 563
                I+HRDLKA N+LLD D N KI+DFG +  F    T GN  +   G   Y APE  
Sbjct: 132 KF---IVHRDLKAENLLLDADXNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPELF 184
Query: 564 SDGQF-SVKSDVFSFGILLLEIVSG 587
              ++   + DV+S G++L  +VSG
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 7   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 64  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +         + + GT  Y
Sbjct: 121 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDY 173
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 172
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 21/199 (10%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCC 452
           + +G+G FG V  G     + +AVK +   ++   +    E  + ++L+H NLV+LLG  
Sbjct: 199 QTIGKGEFGDVMLGDYRGNK-VAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 453 IHGEEK---LLIYEFMPNKSLDSFIFDQERCKLL-DWSKRFHI-ICGTARGLLYLHQDSR 507
           +  EEK    ++ E+M   SL  ++  + R  L  D   +F + +C     + YL  ++ 
Sbjct: 256 V--EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC---EAMEYLEGNN- 309
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
              +HRDL A NVL+ +D   K+SDFGL +     +  G          + APE   + +
Sbjct: 310 --FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKK 362
Query: 568 FSVKSDVFSFGILLLEIVS 586
           FS KSDV+SFGILL EI S
Sbjct: 363 FSTKSDVWSFGILLWEIYS 381

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 393 KKLGEGGFGPV----YKGTLADEQE-IAVKRL-SKISEQGLKELKNEIILFSKLQHRNLV 446
           + LGEG FG V    Y  T     E +AVK L +    Q     K EI +   L H +++
Sbjct: 37  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 447 KLLGCCIH-GEEKL-LIYEFMPNKSLDSFIFDQE--RCKLLDWSKRFHIICGTARGLLYL 502
           K  GCC   G   L L+ E++P  SL  ++        +LL ++++   IC    G+ YL
Sbjct: 97  KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---IC---EGMAYL 150
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----Y 557
           H       IHRDL A NVLLD D   KI DFGLA+A      EG+    V   G     +
Sbjct: 151 HAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV----PEGHEXYRVREDGDSPVFW 203
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            APE   + +F   SDV+SFG+ L E+++
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 32  ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 88
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 89  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 146 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 198
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 9   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 175
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 32  ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 88
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 89  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +         + + GT  Y
Sbjct: 146 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDY 198
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDY 172
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCC 452
           + +G+G FG V  G     + +AVK +   ++   +    E  + ++L+H NLV+LLG  
Sbjct: 18  QTIGKGEFGDVMLGDYRGNK-VAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 453 IHGEEKL-LIYEFMPNKSLDSFIFDQERCKLL-DWSKRFHI-ICGTARGLLYLHQDSRLR 509
           +  +  L ++ E+M   SL  ++  + R  L  D   +F + +C     + YL  ++   
Sbjct: 75  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC---EAMEYLEGNN--- 128
Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFS 569
            +HRDL A NVL+ +D   K+SDFGL +     +  G          + APE   +  FS
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREAAFS 183
Query: 570 VKSDVFSFGILLLEIVS 586
            KSDV+SFGILL EI S
Sbjct: 184 TKSDVWSFGILLWEIYS 200

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 10  ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 66
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 67  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 123
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 176
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 9   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +         + + GT  Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDY 175
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 11  ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 68  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 177
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 23  ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 79
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 80  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 136
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 137 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 189
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 5   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 61
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 62  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 118
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 119 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 171
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 17/197 (8%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCC 452
           + +G+G FG V  G     + +AVK +   ++   +    E  + ++L+H NLV+LLG  
Sbjct: 27  QTIGKGEFGDVMLGDYRGNK-VAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 453 IHGEEKL-LIYEFMPNKSLDSFIFDQERCKLL-DWSKRFHI-ICGTARGLLYLHQDSRLR 509
           +  +  L ++ E+M   SL  ++  + R  L  D   +F + +C     + YL  ++   
Sbjct: 84  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC---EAMEYLEGNN--- 137
Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFS 569
            +HRDL A NVL+ +D   K+SDFGL +     +  G          + APE   + +FS
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFS 192
Query: 570 VKSDVFSFGILLLEIVS 586
            KSDV+SFGILL EI S
Sbjct: 193 TKSDVWSFGILLWEIYS 209

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 7   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 64  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 121 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDY 173
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDY 172
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 3   ALEDFEIGRPLGKGKFGNVY---LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQ 59
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 60  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 116
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 117 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 169
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 9   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 175
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 7   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 64  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 121 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDY 173
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 17/197 (8%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCC 452
           + +G+G FG V  G     + +AVK +   ++   +    E  + ++L+H NLV+LLG  
Sbjct: 12  QTIGKGEFGDVMLGDYRGNK-VAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 453 IHGEEKL-LIYEFMPNKSLDSFIFDQERCKLL-DWSKRFHI-ICGTARGLLYLHQDSRLR 509
           +  +  L ++ E+M   SL  ++  + R  L  D   +F + +C     + YL  ++   
Sbjct: 69  VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC---EAMEYLEGNN--- 122
Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFS 569
            +HRDL A NVL+ +D   K+SDFGL +     +  G          + APE   + +FS
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFS 177
Query: 570 VKSDVFSFGILLLEIVS 586
            KSDV+SFGILL EI S
Sbjct: 178 TKSDVWSFGILLWEIYS 194

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 11  ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 68  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 177
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 8   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 64
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 65  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 122 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDY 174
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 11  ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 68  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDY 177
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDY 172
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 21/202 (10%)
Query: 388 NFSINKKLGEGGFGPV---YKGTLADEQEIAV---KRLSKISEQGLKELKNEIILFSKLQ 441
           N+ I K LGEG FG V   Y  T   +  + +   K L+K   QG   ++ EI     L+
Sbjct: 5   NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 62
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H +++KL       +E +++ E+  N+  D +I  +++    +  + F  I        Y
Sbjct: 63  HPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVE---Y 118
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAP 560
            H   R +I+HRDLK  N+LLD+ +N KI+DFGL+       T+GN  +   G+  Y AP
Sbjct: 119 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAP 171
Query: 561 EYASDGQFS-VKSDVFSFGILL 581
           E  S   ++  + DV+S G++L
Sbjct: 172 EVISGKLYAGPEVDVWSCGVIL 193

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 21/202 (10%)
Query: 388 NFSINKKLGEGGFGPV---YKGTLADEQEIAV---KRLSKISEQGLKELKNEIILFSKLQ 441
           N+ I K LGEG FG V   Y  T   +  + +   K L+K   QG   ++ EI     L+
Sbjct: 15  NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 72
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H +++KL       +E +++ E+  N+  D +I  +++    +  + F  I        Y
Sbjct: 73  HPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVE---Y 128
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAP 560
            H   R +I+HRDLK  N+LLD+ +N KI+DFGL+       T+GN  +   G+  Y AP
Sbjct: 129 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAP 181
Query: 561 EYASDGQFS-VKSDVFSFGILL 581
           E  S   ++  + DV+S G++L
Sbjct: 182 EVISGKLYAGPEVDVWSCGVIL 203

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 21/202 (10%)
Query: 388 NFSINKKLGEGGFGPV---YKGTLADEQEIAV---KRLSKISEQGLKELKNEIILFSKLQ 441
           N+ I K LGEG FG V   Y  T   +  + +   K L+K   QG   ++ EI     L+
Sbjct: 14  NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 71
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H +++KL       +E +++ E+  N+  D +I  +++    +  + F  I        Y
Sbjct: 72  HPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVE---Y 127
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAP 560
            H   R +I+HRDLK  N+LLD+ +N KI+DFGL+       T+GN  +   G+  Y AP
Sbjct: 128 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAP 180
Query: 561 EYASDGQFS-VKSDVFSFGILL 581
           E  S   ++  + DV+S G++L
Sbjct: 181 EVISGKLYAGPEVDVWSCGVIL 202

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDY 172
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCI 453
           LG+G +G VY G  L+++  IA+K + +   +  + L  EI L   L+H+N+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 454 HGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDWSKRFHIICGTA-RGLLYLHQDSRLR 509
                 +  E +P  SL + +    R K   L D  +           GL YLH +   +
Sbjct: 90  ENGFIKIFMEQVPGGSLSALL----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 142
Query: 510 IIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ- 567
           I+HRD+K  NVL++      KISDFG ++   G      T    GT  YMAPE    G  
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPR 200
Query: 568 -FSVKSDVFSFGILLLEIVSGK 588
            +   +D++S G  ++E+ +GK
Sbjct: 201 GYGKAADIWSLGCTIIEMATGK 222

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 21/202 (10%)
Query: 388 NFSINKKLGEGGFGPV---YKGTLADEQEIAV---KRLSKISEQGLKELKNEIILFSKLQ 441
           N+ I K LGEG FG V   Y  T   +  + +   K L+K   QG   ++ EI     L+
Sbjct: 9   NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLR 66
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H +++KL       +E +++ E+  N+  D +I  +++    +  + F  I        Y
Sbjct: 67  HPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVE---Y 122
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAP 560
            H   R +I+HRDLK  N+LLD+ +N KI+DFGL+       T+GN  +   G+  Y AP
Sbjct: 123 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM----TDGNFLKTSCGSPNYAAP 175
Query: 561 EYASDGQFS-VKSDVFSFGILL 581
           E  S   ++  + DV+S G++L
Sbjct: 176 EVISGKLYAGPEVDVWSCGVIL 197

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 23/202 (11%)
Query: 395 LGEGGFGPVYKGTLADEQEI-AVKRLS---------KISEQGLKELKNEIILFSKLQHRN 444
           LGEG F  VYK    +  +I A+K++           I+   L+E+K    L  +L H N
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK----LLQELSHPN 73
Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           ++ LL    H     L+++FM    L+  I D          K + ++  T +GL YLHQ
Sbjct: 74  IIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQ 130
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS 564
                I+HRDLK +N+LLD++   K++DFGLA++FG        ++VV T  Y APE   
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS-PNRAYXHQVV-TRWYRAPELLF 185
Query: 565 DGQ-FSVKSDVFSFGILLLEIV 585
             + + V  D+++ G +L E++
Sbjct: 186 GARMYGVGVDMWAVGCILAELL 207

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 9   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDY 175
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 9   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDY 175
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDY 172
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCI 453
           LG+G +G VY G  L+++  IA+K + +   +  + L  EI L   L+H+N+V+ LG   
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 454 HGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDWSKRFHIICGTA-RGLLYLHQDSRLR 509
                 +  E +P  SL + +    R K   L D  +           GL YLH +   +
Sbjct: 76  ENGFIKIFMEQVPGGSLSALL----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 510 IIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ- 567
           I+HRD+K  NVL++      KISDFG ++   G      T    GT  YMAPE    G  
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPR 186
Query: 568 -FSVKSDVFSFGILLLEIVSGK 588
            +   +D++S G  ++E+ +GK
Sbjct: 187 GYGKAADIWSLGCTIIEMATGK 208

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 119/245 (48%), Gaps = 34/245 (13%)
Query: 359 RGTEQ-KNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQ----E 413
           RG+E+ +N+ +++ +D  L  L  I            LGEG FG V +G L  E     +
Sbjct: 17  RGSEELQNKLEDVVIDRNLLILGKI------------LGEGEFGSVMEGNLKQEDGTSLK 64
Query: 414 IAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK-----LLIYEFMP 466
           +AVK  +L   S++ ++E  +E        H N+++LLG CI    +     ++I  FM 
Sbjct: 65  VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 467 NKSLDSFIFD---QERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD 523
              L +++     +   K +        +   A G+ YL   S    +HRDL A N +L 
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLR 181
Query: 524 QDMNPKISDFGLARA-FGGD-ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
            DM   ++DFGL++  + GD   +G   ++     ++A E  +D  ++ KSDV++FG+ +
Sbjct: 182 DDMTVCVADFGLSKKIYSGDYYRQGRIAKM--PVKWIAIESLADRVYTSKSDVWAFGVTM 239
Query: 582 LEIVS 586
            EI +
Sbjct: 240 WEIAT 244

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 19/220 (8%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVY--KGTLADEQEIAVKRLSK--ISEQGLKE-L 430
           +F   + A  +D +   + LG+G FG V   K  +   QE AVK +SK  + ++  KE L
Sbjct: 21  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG-QECAVKVISKRQVKQKTDKESL 79
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E+ L  +L H N++KL           L+ E      L   I  ++R   +D ++   
Sbjct: 80  LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 136
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGN 547
           II     G+ Y+H++   +I+HRDLK  N+LL+   +D N +I DFGL+  F   E    
Sbjct: 137 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 190
Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
               +GT  Y+APE    G +  K DV+S G++L  ++SG
Sbjct: 191 MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 19/220 (8%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVY--KGTLADEQEIAVKRLSK--ISEQGLKE-L 430
           +F   + A  +D +   + LG+G FG V   K  +   QE AVK +SK  + ++  KE L
Sbjct: 15  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG-QECAVKVISKRQVKQKTDKESL 73
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E+ L  +L H N++KL           L+ E      L   I  ++R   +D ++   
Sbjct: 74  LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 130
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGN 547
           II     G+ Y+H++   +I+HRDLK  N+LL+   +D N +I DFGL+  F   E    
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 184
Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
               +GT  Y+APE    G +  K DV+S G++L  ++SG
Sbjct: 185 MKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 104/211 (49%), Gaps = 32/211 (15%)
Query: 393 KKLGEGGFGPV----YKGTLADEQE-IAVKRLSKISEQGLKE-LKNEIILFSKLQHRNLV 446
           + LGEG FG V    Y  T     E +AVK L +     L+   + EI +   L H ++V
Sbjct: 14  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 447 KLLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERC----KLLDWSKRFHIICGTARGLL 500
           K  GCC    EK   L+ E++P  SL  ++     C    +LL ++++   IC    G+ 
Sbjct: 74  KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQ---IC---EGMA 125
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG---- 556
           YLH       IHR L A NVLLD D   KI DFGLA+A      EG+    V   G    
Sbjct: 126 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPV 178
Query: 557 -YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            + APE   + +F   SDV+SFG+ L E+++
Sbjct: 179 FWYAPECLKECKFYYASDVWSFGVTLYELLT 209

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 104/211 (49%), Gaps = 32/211 (15%)
Query: 393 KKLGEGGFGPV----YKGTLADEQE-IAVKRLSKISEQGLKE-LKNEIILFSKLQHRNLV 446
           + LGEG FG V    Y  T     E +AVK L +     L+   + EI +   L H ++V
Sbjct: 15  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 447 KLLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERC----KLLDWSKRFHIICGTARGLL 500
           K  GCC    EK   L+ E++P  SL  ++     C    +LL ++++   IC    G+ 
Sbjct: 75  KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQLLLFAQQ---IC---EGMA 126
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG---- 556
           YLH       IHR L A NVLLD D   KI DFGLA+A      EG+    V   G    
Sbjct: 127 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV----PEGHEYYRVREDGDSPV 179
Query: 557 -YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            + APE   + +F   SDV+SFG+ L E+++
Sbjct: 180 FWYAPECLKECKFYYASDVWSFGVTLYELLT 210

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 8   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 64
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 65  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI++FG    +           + GT  Y
Sbjct: 122 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDY 174
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE------LKNEIILFSKLQ 441
           + I + LGEG FG V   T    +Q++A+K +S+   Q LK+      ++ EI     L+
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISR---QLLKKSDMHMRVEREISYLKLLR 67
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF--HIICGTARGL 499
           H +++KL        + +++ E+   +  D +I +++R    D  +RF   IIC      
Sbjct: 68  HPHIIKLYDVITTPTDIVMVIEYAGGELFD-YIVEKKRMTE-DEGRRFFQQIICAIE--- 122
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYM 558
            Y H   R +I+HRDLK  N+LLD ++N KI+DFGL+       T+GN  +   G+  Y 
Sbjct: 123 -YCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM----TDGNFLKTSCGSPNYA 174
Query: 559 APEYASDGQFS-VKSDVFSFGILLLEIVSGK 588
           APE  +   ++  + DV+S GI+L  ++ G+
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLS-KISEQGLKELKNEIILFSKLQHRNLV 446
           K LG G FG V+KG    E E     + +K +  K   Q  + + + ++    L H ++V
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL-----LDWSKRFHIICGTARGLLY 501
           +LLG C  G    L+ +++P  SL   +  Q R  L     L+W  +       A+G+ Y
Sbjct: 79  RLLGLC-PGSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQI------AKGMYY 130
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L +     ++HR+L A NVLL      +++DFG+A     D+ +   +       +MA E
Sbjct: 131 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
               G+++ +SDV+S+G+ + E+++
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMT 212

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 35/263 (13%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +  S  K LG G FG V + T            +AVK L   +    +E L +E+ + S 
Sbjct: 46  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEF--------MPNKSLDSFIFDQERCKLLDWSKRFH 490
           L  H N+V LLG C  G   L+I E+           +  DSFI  +    +++  +   
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 491 IICG-------TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
            +          A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D 
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 544 ---TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNK 599
               +GN    V    +MAPE   +  ++ +SDV+S+GI L E+ S G         D+K
Sbjct: 223 NYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
Query: 600 L-NLIRHAWKLWN-EGMPSQLID 620
              +I+  +++ + E  P+++ D
Sbjct: 280 FYKMIKEGFRMLSPEHAPAEMYD 302

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 19/220 (8%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVY--KGTLADEQEIAVKRLSK--ISEQGLKE-L 430
           +F   + A  +D +   + LG+G FG V   K  +   QE AVK +SK  + ++  KE L
Sbjct: 39  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG-QECAVKVISKRQVKQKTDKESL 97
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E+ L  +L H N++KL           L+ E      L   I  ++R   +D ++   
Sbjct: 98  LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 154
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGN 547
           II     G+ Y+H++   +I+HRDLK  N+LL+   +D N +I DFGL+  F   E    
Sbjct: 155 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 208
Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
               +GT  Y+APE    G +  K DV+S G++L  ++SG
Sbjct: 209 MKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 19/220 (8%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVY--KGTLADEQEIAVKRLSK--ISEQGLKE-L 430
           +F   + A  +D +   + LG+G FG V   K  +   QE AVK +SK  + ++  KE L
Sbjct: 38  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG-QECAVKVISKRQVKQKTDKESL 96
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
             E+ L  +L H N++KL           L+ E      L   I  ++R   +D ++   
Sbjct: 97  LREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 153
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGN 547
           II     G+ Y+H++   +I+HRDLK  N+LL+   +D N +I DFGL+  F   E    
Sbjct: 154 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 207
Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
               +GT  Y+APE    G +  K DV+S G++L  ++SG
Sbjct: 208 MKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 9   ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI++FG    +           + GT  Y
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDY 175
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 20/208 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILFSK 439
           ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + S 
Sbjct: 12  EDFDIGRPLGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A  L
Sbjct: 69  LRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            Y H     R+IHRD+K  N+LL  +   KI+DFG    +         + + GT  Y+ 
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLP 178
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE         K D++S G+L  E + G
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 33/218 (15%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHRNLVKLLGCC 452
           LG GGFG V++     D+   A+KR+   + +  +E +  E+   +KL+H  +V+     
Sbjct: 13  LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDW------------SKRFHIICGTAR 497
           +   EK    +  P+          + C+   L DW            S   HI    A 
Sbjct: 73  L---EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE----------GN 547
            + +LH      ++HRDLK SN+    D   K+ DFGL  A   DE E            
Sbjct: 130 AVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIV 585
               VGT  YM+PE      +S K D+FS G++L E++
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 35/263 (13%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +  S  K LG G FG V + T            +AVK L   +    +E L +E+ + S 
Sbjct: 46  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEF--------MPNKSLDSFIFDQERCKLLDWSKRFH 490
           L  H N+V LLG C  G   L+I E+           +  DSFI  +    +++  +   
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 491 IICG-------TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
            +          A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D 
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 544 ---TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNK 599
               +GN    V    +MAPE   +  ++ +SDV+S+GI L E+ S G         D+K
Sbjct: 223 NYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
Query: 600 L-NLIRHAWKLWN-EGMPSQLID 620
              +I+  +++ + E  P+++ D
Sbjct: 280 FYKMIKEGFRMLSPEHAPAEMYD 302

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 393 KKLGEGGFGPVYKGTLADEQE-----IAVKRLS-KISEQGLKELKNEIILFSKLQHRNLV 446
           K LG G FG V+KG    E E     + +K +  K   Q  + + + ++    L H ++V
Sbjct: 37  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL-----LDWSKRFHIICGTARGLLY 501
           +LLG C  G    L+ +++P  SL   +  Q R  L     L+W  +       A+G+ Y
Sbjct: 97  RLLGLC-PGSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQI------AKGMYY 148
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L +     ++HR+L A NVLL      +++DFG+A     D+ +   +       +MA E
Sbjct: 149 LEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
               G+++ +SDV+S+G+ + E+++
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMT 230

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 35/263 (13%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +  S  K LG G FG V + T            +AVK L   +    +E L +E+ + S 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEF--------MPNKSLDSFIFDQERCKLLDWSKRFH 490
           L  H N+V LLG C  G   L+I E+           +  DSFI  +    +++  +   
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 491 IICG-------TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
            +          A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D 
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 544 ---TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNK 599
               +GN    V    +MAPE   +  ++ +SDV+S+GI L E+ S G         D+K
Sbjct: 200 NYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256
Query: 600 L-NLIRHAWKLWN-EGMPSQLID 620
              +I+  +++ + E  P+++ D
Sbjct: 257 FYKMIKEGFRMLSPEHAPAEMYD 279

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQ----EIAVKRLSK--ISEQGLKELKNEIILFSKLQ 441
            F++ + LG+G FG V +  L  E     ++AVK L    I+   ++E   E     +  
Sbjct: 24  QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 442 HRNLVKLLGCCIHGEEK------LLIYEFMPNKSLDSFIFDQ---ERCKLLDWSKRFHII 492
           H ++ KL+G  +    K      ++I  FM +  L +F+      E    L        +
Sbjct: 84  HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGD-ETEGNTNR 550
              A G+ YL   S    IHRDL A N +L +DM   ++DFGL+R  + GD   +G  ++
Sbjct: 144 VDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +     ++A E  +D  ++V SDV++FG+ + EI++
Sbjct: 201 L--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 11  ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   +     + ++    D  +    I   A 
Sbjct: 68  SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYK---ELQKLSKFDEQRTATYITELAN 124
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDY 177
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 8/233 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           + +  K+LG G FG V  G    + ++A+K + + S     E   E  +   L H  LV+
Sbjct: 25  DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L G C       +I E+M N  L +++  +E        +   +       + YL     
Sbjct: 84  LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
            + +HRDL A N L++     K+SDFGL+R    DE   +         +  PE     +
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPV-RWSPPEVLMYSK 197
Query: 568 FSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           FS KSD+++FG+L+ EI S GK     + +      I    +L+   + S+ +
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 250

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 386 TDNFSINKKLGEGGFGPVYK-GTLADEQEIAVKRLSKISEQG--LKELKNEIILFSKLQH 442
            + ++I   LG+G FG V K      +QE AVK ++K S +      +  E+ L  KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N++KL           ++ E      L   I  ++R    D ++   II     G+ Y+
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYM 137
Query: 503 HQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           H+ +   I+HRDLK  N+LL   ++D + KI DFGL+  F   +        +GT  Y+A
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIA 191
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE    G +  K DV+S G++L  ++SG
Sbjct: 192 PEVLR-GTYDEKCDVWSAGVILYILLSG 218

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 386 TDNFSINKKLGEGGFGPVYK-GTLADEQEIAVKRLSKISEQG--LKELKNEIILFSKLQH 442
            + ++I   LG+G FG V K      +QE AVK ++K S +      +  E+ L  KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N++KL           ++ E      L   I  ++R    D ++   II     G+ Y+
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYM 137
Query: 503 HQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           H+ +   I+HRDLK  N+LL   ++D + KI DFGL+  F   +        +GT  Y+A
Sbjct: 138 HKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIA 191
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE    G +  K DV+S G++L  ++SG
Sbjct: 192 PEVLR-GTYDEKCDVWSAGVILYILLSG 218

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 35/263 (13%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +  S  K LG G FG V + T            +AVK L   +    +E L +E+ + S 
Sbjct: 39  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEF--------MPNKSLDSFIFDQERCKLLDWSKRFH 490
           L  H N+V LLG C  G   L+I E+           +  DSFI  +    +++  +   
Sbjct: 99  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 491 IICG-------TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
            +          A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D 
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 544 ---TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNK 599
               +GN    V    +MAPE   +  ++ +SDV+S+GI L E+ S G         D+K
Sbjct: 216 NYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 272
Query: 600 L-NLIRHAWKLWN-EGMPSQLID 620
              +I+  +++ + E  P+++ D
Sbjct: 273 FYKMIKEGFRMLSPEHAPAEMYD 295

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILFSK 439
           ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + S 
Sbjct: 12  EDFDIGRPLGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A  L
Sbjct: 69  LRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            Y H     R+IHRD+K  N+LL  +   KI+DFG    +           + GT  Y+ 
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLP 178
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE         K D++S G+L  E + G
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 35/263 (13%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKISEQGLKE-LKNEIILFSK 439
           +  S  K LG G FG V + T            +AVK L   +    +E L +E+ + S 
Sbjct: 41  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEF--------MPNKSLDSFIFDQERCKLLDWSKRFH 490
           L  H N+V LLG C  G   L+I E+           +  DSFI  +    +++  +   
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 491 IICG-------TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
            +          A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D 
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 544 ---TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNK 599
               +GN    V    +MAPE   +  ++ +SDV+S+GI L E+ S G         D+K
Sbjct: 218 NYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 274
Query: 600 L-NLIRHAWKLWN-EGMPSQLID 620
              +I+  +++ + E  P+++ D
Sbjct: 275 FYKMIKEGFRMLSPEHAPAEMYD 297

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSK----ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGF   ++ + AD +E+   ++      +     +++  EI +   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                +   ++ E    +SL       +R K L   +  + +     G  YLH++   R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV-GTYGYMAPEYASDGQFS 569
           IHRDLK  N+ L++D+  KI DFGLA      E +G   +V+ GT  Y+APE  S    S
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 570 VKSDVFSFGILLLEIVSGK 588
            + DV+S G ++  ++ GK
Sbjct: 220 FEVDVWSIGCIMYTLLVGK 238

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 389 FSINKKLGEGGFGPVYKGTLADE-QEIAVKRL-SKISEQGLKELKNEIILFSKLQHRNLV 446
           + + ++LG GGFG V +    D  +++A+K+   ++S +  +    EI +  KL H N+V
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 447 KL------LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
                   L      +  LL  E+     L  ++   E C  L       ++   +  L 
Sbjct: 76  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 501 YLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           YLH++   RIIHRDLK  N++L    Q +  KI D G A+     E        VGT  Y
Sbjct: 136 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQY 189
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE     +++V  D +SFG L  E ++G
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITG 219

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E++    +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 11  ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   +     + ++    D  +    I   A 
Sbjct: 68  SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYK---ELQKLSKFDEQRTATYITELAN 124
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     R+IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDY 177
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 389 FSINKKLGEGGFGPVYKGTLADE-QEIAVKRL-SKISEQGLKELKNEIILFSKLQHRNLV 446
           + + ++LG GGFG V +    D  +++A+K+   ++S +  +    EI +  KL H N+V
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 447 KL------LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
                   L      +  LL  E+     L  ++   E C  L       ++   +  L 
Sbjct: 77  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 501 YLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           YLH++   RIIHRDLK  N++L    Q +  KI D G A+     E        VGT  Y
Sbjct: 137 YLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQY 190
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE     +++V  D +SFG L  E ++G
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITG 220

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           + +  K+LG G FG V  G    + ++A+K + + S     E   E  +   L H  LV+
Sbjct: 9   DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L G C       +I E+M N  L +++  +E        +   +       + YL     
Sbjct: 68  LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 123
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
            + +HRDL A N L++     K+SDFGL+R    DE   +         +  PE     +
Sbjct: 124 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSK 181
Query: 568 FSVKSDVFSFGILLLEIVS 586
           FS KSD+++FG+L+ EI S
Sbjct: 182 FSSKSDIWAFGVLMWEIYS 200

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSK----ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGF   ++ + AD +E+   ++      +     +++  EI +   L H+++V   G
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                +   ++ E    +SL       +R K L   +  + +     G  YLH++   R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV-GTYGYMAPEYASDGQFS 569
           IHRDLK  N+ L++D+  KI DFGLA      E +G   +V+ GT  Y+APE  S    S
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 570 VKSDVFSFGILLLEIVSGK 588
            + DV+S G ++  ++ GK
Sbjct: 218 FEVDVWSIGCIMYTLLVGK 236

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 8/233 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           + +  K+LG G FG V  G    + ++A+K + + S     E   E  +   L H  LV+
Sbjct: 25  DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L G C       +I E+M N  L +++  +E        +   +       + YL     
Sbjct: 84  LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 139
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
            + +HRDL A N L++     K+SDFGL+R    DE   +         +  PE     +
Sbjct: 140 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSK 197
Query: 568 FSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           FS KSD+++FG+L+ EI S GK     + +      I    +L+   + S+ +
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 250

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           + +  K+LG G FG V  G    + ++A+K + + S     E   E  +   L H  LV+
Sbjct: 10  DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L G C       +I E+M N  L +++  +E        +   +       + YL     
Sbjct: 69  LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
            + +HRDL A N L++     K+SDFGL+R    DE   +         +  PE     +
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSK 182
Query: 568 FSVKSDVFSFGILLLEIVS 586
           FS KSD+++FG+L+ EI S
Sbjct: 183 FSSKSDIWAFGVLMWEIYS 201

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 8/233 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           + +  K+LG G FG V  G    + ++A+K + + S     E   E  +   L H  LV+
Sbjct: 5   DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L G C       +I E+M N  L +++  +E        +   +       + YL     
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 119
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
            + +HRDL A N L++     K+SDFGL+R    DE   +         +  PE     +
Sbjct: 120 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSK 177
Query: 568 FSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           FS KSD+++FG+L+ EI S GK     + +      I    +L+   + S+ +
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 230

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 374 LPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNE 433
           LPL    TIA       + K++G+G +G V+ G    E+ +AVK      E      + E
Sbjct: 27  LPLLVQRTIAK---QIQMVKQIGKGRYGEVWMGKWRGEK-VAVKVFFTTEEASWFR-ETE 81
Query: 434 IILFSKLQHRNLVKLLGCCIHGE----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
           I     ++H N++  +   I G     +  LI ++  N SL    +D  +   LD     
Sbjct: 82  IYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSML 137
Query: 490 HIICGTARGLLYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
            +   +  GL +LH +      +  I HRDLK+ N+L+ ++    I+D GLA  F  D  
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
Query: 545 EGNT--NRVVGTYGYMAPEYASDG------QFSVKSDVFSFGILLLEIV 585
           E +   N  VGT  YM PE   +       Q  + +D++SFG++L E+ 
Sbjct: 198 EVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           + +  K+LG G FG V  G    + ++A+K + + S     E   E  +   L H  LV+
Sbjct: 16  DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L G C       +I E+M N  L +++  +E        +   +       + YL     
Sbjct: 75  LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 130
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
            + +HRDL A N L++     K+SDFGL+R    DE   +         +  PE     +
Sbjct: 131 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSK 188
Query: 568 FSVKSDVFSFGILLLEIVS 586
           FS KSD+++FG+L+ EI S
Sbjct: 189 FSSKSDIWAFGVLMWEIYS 207

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSK----ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGF   ++ + AD +E+   ++      +     +++  EI +   L H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                +   ++ E    +SL       +R K L   +  + +     G  YLH++   R+
Sbjct: 83  FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 136
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV-GTYGYMAPEYASDGQFS 569
           IHRDLK  N+ L++D+  KI DFGLA      E +G   +V+ GT  Y+APE  S    S
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 570 VKSDVFSFGILLLEIVSGK 588
            + DV+S G ++  ++ GK
Sbjct: 194 FEVDVWSIGCIMYTLLVGK 212

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 395 LGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGF   Y+ T  D +E+     V +   +     +++  EI +   L + ++V   G
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                +   ++ E    +SL       +R K +   +  + +  T +G+ YLH +   R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDLK  N+ L+ DM+ KI DFGLA     D     T  + GT  Y+APE       S 
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSF 221
Query: 571 KSDVFSFGILLLEIVSGK 588
           + D++S G +L  ++ GK
Sbjct: 222 EVDIWSLGCILYTLLVGK 239

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           + +  K+LG G FG V  G    + ++A+K + + S     E   E  +   L H  LV+
Sbjct: 10  DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           L G C       +I E+M N  L +++  +E        +   +       + YL     
Sbjct: 69  LYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK-- 124
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
            + +HRDL A N L++     K+SDFGL+R    DE   +         +  PE     +
Sbjct: 125 -QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYSK 182
Query: 568 FSVKSDVFSFGILLLEIVS 586
           FS KSD+++FG+L+ EI S
Sbjct: 183 FSSKSDIWAFGVLMWEIYS 201

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI-----SEQGLKELKNEIILFSKLQ 441
           D F   +KLG G FG V+   L +E+   ++R+ K      S+  +++++ EI +   L 
Sbjct: 22  DLFIFKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPN-KSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N++K+           ++ E     + L+  +  Q R K L       ++      L 
Sbjct: 79  HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNP----KISDFGLARAFGGDETEGNTNRVVGTYG 556
           Y H      ++H+DLK  N+L  QD +P    KI DFGLA  F  DE   N     GT  
Sbjct: 139 YFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNA---AGTAL 191
Query: 557 YMAPE-YASDGQFSVKSDVFSFGILLLEIVSG 587
           YMAPE +  D  F  K D++S G+++  +++G
Sbjct: 192 YMAPEVFKRDVTF--KCDIWSAGVVMYFLLTG 221

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSK----ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGF   ++ + AD +E+   ++      +     +++  EI +   L H+++V   G
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                +   ++ E    +SL       +R K L   +  + +     G  YLH++   R+
Sbjct: 89  FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 142
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDLK  N+ L++D+  KI DFGLA     D     T  + GT  Y+APE  S    S 
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 200
Query: 571 KSDVFSFGILLLEIVSGK 588
           + DV+S G ++  ++ GK
Sbjct: 201 EVDVWSIGCIMYTLLVGK 218

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 395 LGEGGFGPVYK-GTLADEQEIAVKRLSKISEQG--LKELKNEIILFSKLQHRNLVKLLGC 451
           LG+G FG V K      +QE AVK ++K S +      +  E+ L  KL H N++KL   
Sbjct: 30  LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 452 CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRII 511
                   ++ E      L   I  ++R    D ++   II     G+ Y+H+ +   I+
Sbjct: 90  LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 512 HRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF 568
           HRDLK  N+LL   ++D + KI DFGL+  F   +        +GT  Y+APE    G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLR-GTY 199
Query: 569 SVKSDVFSFGILLLEIVSG 587
             K DV+S G++L  ++SG
Sbjct: 200 DEKCDVWSAGVILYILLSG 218

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 15/221 (6%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           A ++  +N+ LGEG FG VY+G   + +     +AVK   K      KE   +E ++   
Sbjct: 6   AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-FDQERCKLLDWSKRFHIICGTARG 498
           L H ++VKL+G  I  E   +I E  P   L  ++  ++   K+L        IC   + 
Sbjct: 66  LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC---KA 121
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           + YL     +  +HRD+   N+L+      K+ DFGL+R +  DE     +       +M
Sbjct: 122 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWM 177
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
           +PE  +  +F+  SDV+ F + + EI+S  K + F+  +NK
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEILSFGK-QPFFWLENK 217

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 33/265 (12%)
Query: 395 LGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGC-- 451
           +G GGFG V+K     D +   +KR+   +E+  +E+K      +KL H N+V   GC  
Sbjct: 19  IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK----ALAKLDHVNIVHYNGCWD 74
Query: 452 ------------CIHGEEKLLI--YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
                           + K L    EF    +L+ +I ++ R + LD      +     +
Sbjct: 75  GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQITK 133
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ Y+H     ++I+RDLK SN+ L      KI DFGL  +   D   G   R  GT  Y
Sbjct: 134 GVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRSKGTLRY 187
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIV----SGKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           M+PE  S   +  + D+++ G++L E++    +  +   F+ +D +  +I   +    + 
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF-TDLRDGIISDIFDKKEKT 246
Query: 614 MPSQLIDACFKDSFNLAEVIRCIHI 638
           +  +L+    +D  N +E++R + +
Sbjct: 247 LLQKLLSKKPEDRPNTSEILRTLTV 271

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 394 KLGEGGFGPV---YKGTLADEQE--IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           +LG+G FG V       L D     +AVK+L        ++ + EI +   L    +VK 
Sbjct: 14  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 449 LGCCI-HGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
            G     G  +L L+ E++P+  L  F+  Q     LD S+         +G+ YL   S
Sbjct: 74  RGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 129
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG--YMAPEYAS 564
           R R +HRDL A N+L++ + + KI+DFGLA+    D+ +    R  G     + APE  S
Sbjct: 130 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DXXVVREPGQSPIFWYAPESLS 187
Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
           D  FS +SDV+SFG++L E+ +
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT 209

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSK----ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGF   ++ + AD +E+   ++      +     +++  EI +   L H+++V   G
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                +   ++ E    +SL       +R K L   +  + +     G  YLH++   R+
Sbjct: 85  FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDLK  N+ L++D+  KI DFGLA     D     T  + GT  Y+APE  S    S 
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 571 KSDVFSFGILLLEIVSGK 588
           + DV+S G ++  ++ GK
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSK----ISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGF   ++ + AD +E+   ++      +     +++  EI +   L H+++V   G
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                +   ++ E    +SL       +R K L   +  + +     G  YLH++   R+
Sbjct: 85  FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           IHRDLK  N+ L++D+  KI DFGLA     D     T  + GT  Y+APE  S    S 
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 571 KSDVFSFGILLLEIVSGK 588
           + DV+S G ++  ++ GK
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 15/221 (6%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           A ++  +N+ LGEG FG VY+G   + +     +AVK   K      KE   +E ++   
Sbjct: 22  AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-FDQERCKLLDWSKRFHIICGTARG 498
           L H ++VKL+G  I  E   +I E  P   L  ++  ++   K+L        IC   + 
Sbjct: 82  LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC---KA 137
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           + YL     +  +HRD+   N+L+      K+ DFGL+R +  DE     +       +M
Sbjct: 138 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWM 193
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
           +PE  +  +F+  SDV+ F + + EI+S  K + F+  +NK
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEILSFGK-QPFFWLENK 233

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILF 437
           A ++F I + LG+G FG VY   LA E+     +A+K L  +++ + G++ +L+ E+ + 
Sbjct: 6   ALEDFEIGRPLGKGKFGNVY---LAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           S L+H N+++L G         LI E+ P   L +   + ++    D  +    I   A 
Sbjct: 63  SHLRHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L Y H     ++IHRD+K  N+LL      KI+DFG    +           + GT  Y
Sbjct: 120 ALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDY 172
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 15/221 (6%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKISEQGLKE-LKNEIILFSK 439
           A ++  +N+ LGEG FG VY+G   + +     +AVK   K      KE   +E ++   
Sbjct: 10  AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-FDQERCKLLDWSKRFHIICGTARG 498
           L H ++VKL+G  I  E   +I E  P   L  ++  ++   K+L        IC   + 
Sbjct: 70  LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC---KA 125
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           + YL     +  +HRD+   N+L+      K+ DFGL+R +  DE     +       +M
Sbjct: 126 MAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWM 181
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
           +PE  +  +F+  SDV+ F + + EI+S  K + F+  +NK
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILSFGK-QPFFWLENK 221

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 394 KLGEGGFGPV---YKGTLADEQE--IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           +LG+G FG V       L D     +AVK+L        ++ + EI +   L    +VK 
Sbjct: 17  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 449 LGCCI-HGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
            G     G + L L+ E++P+  L  F+  Q     LD S+         +G+ YL   S
Sbjct: 77  RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 132
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
           R R +HRDL A N+L++ + + KI+DFGLA+    D+       VV   G     + APE
Sbjct: 133 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAPE 187
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             SD  FS +SDV+SFG++L E+ +
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFT 212

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 394 KLGEGGFGPV---YKGTLADEQE--IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           +LG+G FG V       L D     +AVK+L        ++ + EI +   L    +VK 
Sbjct: 30  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 449 LGCCI-HGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
            G     G + L L+ E++P+  L  F+  Q     LD S+         +G+ YL   S
Sbjct: 90  RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 145
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
           R R +HRDL A N+L++ + + KI+DFGLA+    D+       VV   G     + APE
Sbjct: 146 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAPE 200
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             SD  FS +SDV+SFG++L E+ +
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFT 225

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 395 LGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGF   Y+ T  D +E+     V +   +     +++  EI +   L + ++V   G
Sbjct: 34  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                +   ++ E    +SL       +R K +   +  + +  T +G+ YLH +   R+
Sbjct: 94  FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 147
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR-VVGTYGYMAPEYASDGQFS 569
           IHRDLK  N+ L+ DM+ KI DFGLA      E +G   + + GT  Y+APE       S
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKDLCGTPNYIAPEVLCKKGHS 204
Query: 570 VKSDVFSFGILLLEIVSGK 588
            + D++S G +L  ++ GK
Sbjct: 205 FEVDIWSLGCILYTLLVGK 223

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 394 KLGEGGFGPV---YKGTLADEQE--IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           +LG+G FG V       L D     +AVK+L        ++ + EI +   L    +VK 
Sbjct: 18  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 449 LGCCI-HGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
            G     G + L L+ E++P+  L  F+  Q     LD S+         +G+ YL   S
Sbjct: 78  RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 133
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
           R R +HRDL A N+L++ + + KI+DFGLA+    D+       VV   G     + APE
Sbjct: 134 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DYYVVREPGQSPIFWYAPE 188
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             SD  FS +SDV+SFG++L E+ +
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFT 213

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 395 LGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGF   Y+ T  D +E+     V +   +     +++  EI +   L + ++V   G
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                +   ++ E    +SL       +R K +   +  + +  T +G+ YLH +   R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV-GTYGYMAPEYASDGQFS 569
           IHRDLK  N+ L+ DM+ KI DFGLA      E +G   + + GT  Y+APE       S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 570 VKSDVFSFGILLLEIVSGK 588
            + D++S G +L  ++ GK
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 395 LGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG+GGF   Y+ T  D +E+     V +   +     +++  EI +   L + ++V   G
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
                +   ++ E    +SL       +R K +   +  + +  T +G+ YLH +   R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN---RV 163
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR-VVGTYGYMAPEYASDGQFS 569
           IHRDLK  N+ L+ DM+ KI DFGLA      E +G   + + GT  Y+APE       S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKDLCGTPNYIAPEVLCKKGHS 220
Query: 570 VKSDVFSFGILLLEIVSGK 588
            + D++S G +L  ++ GK
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 19/243 (7%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSK---ISEQGLKELKNEIILF 437
           I    ++F ++K LG+G FG V+        Q  A+K L K   + +  ++    E  + 
Sbjct: 13  IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 438 SKLQHRNLVKLLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
           S       +  + C    +E L  + E++    L   ++  + C   D S+         
Sbjct: 73  SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEII 129
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTNRVVGTY 555
            GL +LH      I++RDLK  N+LLD+D + KI+DFG+ +    GD     TN   GT 
Sbjct: 130 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---AKTNEFCGTP 183
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP 615
            Y+APE     +++   D +SFG+LL E++ G+     +H  ++  L  H+ ++ N   P
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP---FHGQDEEELF-HSIRMDNPFYP 239
Query: 616 SQL 618
             L
Sbjct: 240 RWL 242

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 377 FELATIANATDNFSINKKLGEGGFGPVY--KGTLADEQEIAVKRLSK--ISEQGLKE-LK 431
           F   + A  +D +   + LG+G FG V   K  +   QE AVK +SK  + ++  KE L 
Sbjct: 16  FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITG-QECAVKVISKRQVKQKTDKESLL 74
Query: 432 NEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI 491
            E+ L  +L H N+ KL           L+ E      L   I  ++R   +D ++   I
Sbjct: 75  REVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---I 131
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNT 548
           I     G+ Y H++   +I+HRDLK  N+LL+   +D N +I DFGL+  F   E     
Sbjct: 132 IRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKX 185
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
              +GT  Y+APE    G +  K DV+S G++L  ++SG
Sbjct: 186 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 18/210 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   I + +G+G FG VY G    E  I +  + + +E  LK  K E++ + + +H N+V
Sbjct: 33  EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
             +G C+      +I      ++L S + D +   +LD +K   I     +G+ YLH   
Sbjct: 93  LFMGACMSPPHLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAKG 150
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG---YMAPE-- 561
              I+H+DLK+ NV  D +    I+DFGL    G  +     +++    G   ++APE  
Sbjct: 151 ---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206
Query: 562 --YASDGQ-----FSVKSDVFSFGILLLEI 584
              + D +     FS  SDVF+ G +  E+
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 118/286 (41%), Gaps = 31/286 (10%)
Query: 375 PLFELATIANATDNFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSK---ISEQGL 427
           PL  L  +    D   + +KLG+G FG V +G           +AVK L        + +
Sbjct: 7   PLQSLTCLIGEKD-LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM 65
Query: 428 KELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSK 487
            +   E+     L HRNL++L G  +    K+ + E  P  SL   +   +   LL    
Sbjct: 66  DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS 124
Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETE 545
           R+ +    A G+ YL      R IHRDL A N+LL      KI DFGL RA     D   
Sbjct: 125 RYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH 605
              +R V  + + APE      FS  SD + FG+ L E+ +  +          LN  + 
Sbjct: 180 MQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-----GLNGSQI 233
Query: 606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
             K+  EG      + C +D +N         + + C    PEDRP
Sbjct: 234 LHKIDKEGERLPRPEDCPQDIYN---------VMVQCWAHKPEDRP 270

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 19/243 (7%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSK---ISEQGLKELKNEIILF 437
           I    ++F ++K LG+G FG V+        Q  A+K L K   + +  ++    E  + 
Sbjct: 12  IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 438 SKLQHRNLVKLLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
           S       +  + C    +E L  + E++    L   ++  + C   D S+         
Sbjct: 72  SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEII 128
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTNRVVGTY 555
            GL +LH      I++RDLK  N+LLD+D + KI+DFG+ +    GD     TN   GT 
Sbjct: 129 LGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---AKTNXFCGTP 182
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP 615
            Y+APE     +++   D +SFG+LL E++ G+     +H  ++  L  H+ ++ N   P
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP---FHGQDEEELF-HSIRMDNPFYP 238
Query: 616 SQL 618
             L
Sbjct: 239 RWL 241

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 392 NKKLGEGGFGPVYKGTLADEQEIAVKRL----SKISEQGLK-ELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    ++ +    +    ++ ++  LK EL  E  +  +L +  +V
Sbjct: 16  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++      K  +  +  H +   + G+ YL + +
Sbjct: 76  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
               +HRDL A NVLL      KISDFGL++A   DE          T+G     + APE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ----THGKWPVKWYAPE 184
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +FS KSDV+SFG+L+ E  S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 118/286 (41%), Gaps = 31/286 (10%)
Query: 375 PLFELATIANATDNFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSK---ISEQGL 427
           PL  L  +    D   + +KLG+G FG V +G           +AVK L        + +
Sbjct: 7   PLQSLTCLIGEKD-LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM 65
Query: 428 KELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSK 487
            +   E+     L HRNL++L G  +    K+ + E  P  SL   +   +   LL    
Sbjct: 66  DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLS 124
Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETE 545
           R+ +    A G+ YL      R IHRDL A N+LL      KI DFGL RA     D   
Sbjct: 125 RYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH 605
              +R V  + + APE      FS  SD + FG+ L E+ +  +          LN  + 
Sbjct: 180 MQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-----GLNGSQI 233
Query: 606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
             K+  EG      + C +D +N         + + C    PEDRP
Sbjct: 234 LHKIDKEGERLPRPEDCPQDIYN---------VMVQCWAHKPEDRP 270

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 392 NKKLGEGGFGPVYKGTLADEQEIAVKRL----SKISEQGLK-ELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    ++ +    +    ++ ++  LK EL  E  +  +L +  +V
Sbjct: 32  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++      K  +  +  H +   + G+ YL + +
Sbjct: 92  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 147
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
               +HRDL A NVLL      KISDFGL++A   DE          T+G     + APE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 200
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +FS KSDV+SFG+L+ E  S
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 392 NKKLGEGGFGPVYKGTLADEQEIAVKRL----SKISEQGLK-ELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    ++ +    +    ++ ++  LK EL  E  +  +L +  +V
Sbjct: 32  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++      K  +  +  H +   + G+ YL + +
Sbjct: 92  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 147
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
               +HRDL A NVLL      KISDFGL++A   DE          T+G     + APE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 200
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +FS KSDV+SFG+L+ E  S
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 44/277 (15%)
Query: 395 LGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGC-- 451
           +G GGFG V+K     D +   ++R+   +E+  +E+K      +KL H N+V   GC  
Sbjct: 20  IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK----ALAKLDHVNIVHYNGCWD 75
Query: 452 -----CIHGEEKLLIYEFMPNKSLDS--------FI-------------FDQERCKLLDW 485
                    ++ L   ++ P  S +S        FI              ++ R + LD 
Sbjct: 76  GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 135
Query: 486 SKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE 545
                +     +G+ Y+H     ++IHRDLK SN+ L      KI DFGL  +   D   
Sbjct: 136 VLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND--- 189
Query: 546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIV----SGKKNRGFYHSDNKLN 601
           G   R  GT  YM+PE  S   +  + D+++ G++L E++    +  +   F+ +D +  
Sbjct: 190 GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF-TDLRDG 248
Query: 602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHI 638
           +I   +    + +  +L+    +D  N +E++R + +
Sbjct: 249 IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTV 285

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 392 NKKLGEGGFGPVYKGTLADEQEIAVKRL----SKISEQGLK-ELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    ++ +    +    ++ ++  LK EL  E  +  +L +  +V
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++      K  +  +  H +   + G+ YL + +
Sbjct: 82  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 137
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
               +HRDL A NVLL      KISDFGL++A   DE          T+G     + APE
Sbjct: 138 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 190
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +FS KSDV+SFG+L+ E  S
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFS 215

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 392 NKKLGEGGFGPVYKGTLADEQEIAVKRL----SKISEQGLK-ELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    ++ +    +    ++ ++  LK EL  E  +  +L +  +V
Sbjct: 30  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++      K  +  +  H +   + G+ YL + +
Sbjct: 90  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 145
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
               +HRDL A NVLL      KISDFGL++A   DE          T+G     + APE
Sbjct: 146 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 198
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +FS KSDV+SFG+L+ E  S
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFS 223

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 392 NKKLGEGGFGPVYKGTLADEQEIAVKRL----SKISEQGLK-ELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    ++ +    +    ++ ++  LK EL  E  +  +L +  +V
Sbjct: 10  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++      K  +  +  H +   + G+ YL + +
Sbjct: 70  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 125
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
               +HRDL A NVLL      KISDFGL++A   DE          T+G     + APE
Sbjct: 126 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 178
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +FS KSDV+SFG+L+ E  S
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFS 203

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 392 NKKLGEGGFGPVYKGTLADEQEIAVKRL----SKISEQGLK-ELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    ++ +    +    ++ ++  LK EL  E  +  +L +  +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++      K  +  +  H +   + G+ YL + +
Sbjct: 72  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 127
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
               +HRDL A NVLL      KISDFGL++A   DE          T+G     + APE
Sbjct: 128 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 180
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +FS KSDV+SFG+L+ E  S
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFS 205

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 392 NKKLGEGGFGPVYKGTLADEQEIAVKRL----SKISEQGLK-ELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    ++ +    +    ++ ++  LK EL  E  +  +L +  +V
Sbjct: 16  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++      K  +  +  H +   + G+ YL + +
Sbjct: 76  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 131
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
               +HRDL A NVLL      KISDFGL++A   DE          T+G     + APE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 184
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +FS KSDV+SFG+L+ E  S
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 31  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 89  LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 190
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G ++ E++ G
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   +   T  VV  Y
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPEVVTRY 190
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G ++ E++ G
Sbjct: 191 -YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 114/273 (41%), Gaps = 30/273 (10%)
Query: 388 NFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSK---ISEQGLKELKNEIILFSKL 440
           +  + +KLG+G FG V +G           +AVK L        + + +   E+     L
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
            HRNL++L G  +    K+ + E  P  SL   +   +   LL    R+ +    A G+ 
Sbjct: 69  DHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 125
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNRVVGTYGYM 558
           YL      R IHRDL A N+LL      KI DFGL RA     D      +R V  + + 
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWC 181
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE      FS  SD + FG+ L E+ +  +          LN  +   K+  EG     
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-----GLNGSQILHKIDKEGERLPR 236
Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            + C +D +N         + + C    PEDRP
Sbjct: 237 PEDCPQDIYN---------VMVQCWAHKPEDRP 260

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 114/273 (41%), Gaps = 30/273 (10%)
Query: 388 NFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSK---ISEQGLKELKNEIILFSKL 440
           +  + +KLG+G FG V +G           +AVK L        + + +   E+     L
Sbjct: 13  DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
            HRNL++L G  +    K+ + E  P  SL   +   +   LL    R+ +    A G+ 
Sbjct: 73  DHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 129
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNRVVGTYGYM 558
           YL      R IHRDL A N+LL      KI DFGL RA     D      +R V  + + 
Sbjct: 130 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWC 185
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE      FS  SD + FG+ L E+ +  +          LN  +   K+  EG     
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-----GLNGSQILHKIDKEGERLPR 240
Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            + C +D +N         + + C    PEDRP
Sbjct: 241 PEDCPQDIYN---------VMVQCWAHKPEDRP 264

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVVAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D    ++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G+++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK---ELKNE 433
            + T ++ +D + + + LG GG   V+    L D +++AVK L     +        + E
Sbjct: 3   HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 434 IILFSKLQHRNLVKLLGC----CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
               + L H  +V +          G    ++ E++   +L   +  +     +   +  
Sbjct: 63  AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 119
Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNT 548
            +I    + L + HQ+    IIHRD+K +N+L+      K+ DFG+ARA      +   T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             V+GT  Y++PE A       +SDV+S G +L E+++G+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D    ++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G+++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 44/253 (17%)
Query: 350 RYFRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLA 409
           ++   ++  R  + KN + NI L +            ++FS+++ +G GGFG VY    A
Sbjct: 164 KFIESDKFTRFCQWKNVELNIHLTM------------NDFSVHRIIGRGGFGEVYGCRKA 211
Query: 410 DEQEI-AVKRLSKIS---EQGLKELKNEIILFSKLQHRN--LVKLLGCCIHGEEKLLIYE 463
           D  ++ A+K L K     +QG     NE I+ S +   +   +  +    H  +KL    
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL---- 267
Query: 464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL--------HQDSRLRIIHRDL 515
                   SFI D      L +    H +   A    Y         H  +R  +++RDL
Sbjct: 268 --------SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDL 318
Query: 516 KASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDV 574
           K +N+LLD+  + +ISD GLA  F   +   +    VGT+GYMAPE    G  +   +D 
Sbjct: 319 KPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADW 374
Query: 575 FSFGILLLEIVSG 587
           FS G +L +++ G
Sbjct: 375 FSLGCMLFKLLRG 387

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 44/253 (17%)
Query: 350 RYFRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLA 409
           ++   ++  R  + KN + NI L +            ++FS+++ +G GGFG VY    A
Sbjct: 164 KFIESDKFTRFCQWKNVELNIHLTM------------NDFSVHRIIGRGGFGEVYGCRKA 211
Query: 410 DEQEI-AVKRLSKIS---EQGLKELKNEIILFSKLQHRN--LVKLLGCCIHGEEKLLIYE 463
           D  ++ A+K L K     +QG     NE I+ S +   +   +  +    H  +KL    
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL---- 267
Query: 464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL--------HQDSRLRIIHRDL 515
                   SFI D      L +    H +   A    Y         H  +R  +++RDL
Sbjct: 268 --------SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDL 318
Query: 516 KASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDV 574
           K +N+LLD+  + +ISD GLA  F   +   +    VGT+GYMAPE    G  +   +D 
Sbjct: 319 KPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADW 374
Query: 575 FSFGILLLEIVSG 587
           FS G +L +++ G
Sbjct: 375 FSLGCMLFKLLRG 387

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 114/273 (41%), Gaps = 30/273 (10%)
Query: 388 NFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSK---ISEQGLKELKNEIILFSKL 440
           +  + +KLG+G FG V +G           +AVK L        + + +   E+     L
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
            HRNL++L G  +    K+ + E  P  SL   +   +   LL    R+ +    A G+ 
Sbjct: 69  DHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 125
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNRVVGTYGYM 558
           YL      R IHRDL A N+LL      KI DFGL RA     D      +R V  + + 
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWC 181
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE      FS  SD + FG+ L E+ +  +          LN  +   K+  EG     
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-----GLNGSQILHKIDKEGERLPR 236
Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            + C +D +N         + + C    PEDRP
Sbjct: 237 PEDCPQDIYN---------VMVQCWAHKPEDRP 260

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 114/273 (41%), Gaps = 30/273 (10%)
Query: 388 NFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSK---ISEQGLKELKNEIILFSKL 440
           +  + +KLG+G FG V +G           +AVK L        + + +   E+     L
Sbjct: 13  DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
            HRNL++L G  +    K+ + E  P  SL   +   +   LL    R+ +    A G+ 
Sbjct: 73  DHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 129
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNRVVGTYGYM 558
           YL      R IHRDL A N+LL      KI DFGL RA     D      +R V  + + 
Sbjct: 130 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWC 185
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE      FS  SD + FG+ L E+ +  +          LN  +   K+  EG     
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-----GLNGSQILHKIDKEGERLPR 240
Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            + C +D +N         + + C    PEDRP
Sbjct: 241 PEDCPQDIYN---------VMVQCWAHKPEDRP 264

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 44/253 (17%)
Query: 350 RYFRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLA 409
           ++   ++  R  + KN + NI L +            ++FS+++ +G GGFG VY    A
Sbjct: 164 KFIESDKFTRFCQWKNVELNIHLTM------------NDFSVHRIIGRGGFGEVYGCRKA 211
Query: 410 DEQEI-AVKRLSKIS---EQGLKELKNEIILFSKLQHRN--LVKLLGCCIHGEEKLLIYE 463
           D  ++ A+K L K     +QG     NE I+ S +   +   +  +    H  +KL    
Sbjct: 212 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL---- 267
Query: 464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL--------HQDSRLRIIHRDL 515
                   SFI D      L +    H +   A    Y         H  +R  +++RDL
Sbjct: 268 --------SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDL 318
Query: 516 KASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDV 574
           K +N+LLD+  + +ISD GLA  F   +   +    VGT+GYMAPE    G  +   +D 
Sbjct: 319 KPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADW 374
Query: 575 FSFGILLLEIVSG 587
           FS G +L +++ G
Sbjct: 375 FSLGCMLFKLLRG 387

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 388 NFSINKKLGEGGFGPVYK-GTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQHR 443
           +F I + LG G FG V+   +  + +  A+K L K     LK+++   +E ++ S + H 
Sbjct: 7   DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
            ++++ G     ++  +I +++    L S +   +R    +   +F+        L YLH
Sbjct: 67  FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP--NPVAKFYA-AEVCLALEYLH 123
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
                 II+RDLK  N+LLD++ + KI+DFG A+          T  + GT  Y+APE  
Sbjct: 124 SKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDYIAPEVV 175
Query: 564 SDGQFSVKSDVFSFGILLLEIVSG 587
           S   ++   D +SFGIL+ E+++G
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAG 199

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V K        I  ++L  +  +    ++N+II   ++ H    
Sbjct: 16  DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNS 73
Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  + + +R       K   +     RGL YL
Sbjct: 74  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK---VSIAVLRGLAYL 130
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YMAPE 
Sbjct: 131 RE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAPER 184
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGR 210

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 392 NKKLGEGGFGPVYKGTLADEQEIAVKRL----SKISEQGLK-ELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    ++ +    +    ++ ++  LK EL  E  +  +L +  +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++      K  +  +  H +   + G+ YL + +
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 489
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
               +HRDL A NVLL      KISDFGL++A   DE          T+G     + APE
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 542
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +FS KSDV+SFG+L+ E  S
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFS 567

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 44/253 (17%)
Query: 350 RYFRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLA 409
           ++   ++  R  + KN + NI L +            ++FS+++ +G GGFG VY    A
Sbjct: 163 KFIESDKFTRFCQWKNVELNIHLTM------------NDFSVHRIIGRGGFGEVYGCRKA 210
Query: 410 DEQEI-AVKRLSKIS---EQGLKELKNEIILFSKLQHRN--LVKLLGCCIHGEEKLLIYE 463
           D  ++ A+K L K     +QG     NE I+ S +   +   +  +    H  +KL    
Sbjct: 211 DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL---- 266
Query: 464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL--------HQDSRLRIIHRDL 515
                   SFI D      L +    H +   A    Y         H  +R  +++RDL
Sbjct: 267 --------SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDL 317
Query: 516 KASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDV 574
           K +N+LLD+  + +ISD GLA  F   +   +    VGT+GYMAPE    G  +   +D 
Sbjct: 318 KPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAYDSSADW 373
Query: 575 FSFGILLLEIVSG 587
           FS G +L +++ G
Sbjct: 374 FSLGCMLFKLLRG 386

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 392 NKKLGEGGFGPVYKGTLADEQEIAVKRL----SKISEQGLK-ELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    ++ +    +    ++ ++  LK EL  E  +  +L +  +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++      K  +  +  H +   + G+ YL + +
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV---SMGMKYLEESN 490
Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-----YMAPE 561
               +HRDL A NVLL      KISDFGL++A   DE          T+G     + APE
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYAPE 543
Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +FS KSDV+SFG+L+ E  S
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFS 568

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 114/273 (41%), Gaps = 30/273 (10%)
Query: 388 NFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSK---ISEQGLKELKNEIILFSKL 440
           +  + +KLG+G FG V +G           +AVK L        + + +   E+     L
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
            HRNL++L G  +    K+ + E  P  SL   +   +   LL    R+ +    A G+ 
Sbjct: 69  DHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 125
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNRVVGTYGYM 558
           YL      R IHRDL A N+LL      KI DFGL RA     D      +R V  + + 
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWC 181
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE      FS  SD + FG+ L E+ +  +          LN  +   K+  EG     
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-----GLNGSQILHKIDKEGERLPR 236
Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            + C +D +N         + + C    PEDRP
Sbjct: 237 PEDCPQDIYN---------VMVQCWAHKPEDRP 260

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK---ELKNE 433
            + T ++ +D + + + LG GG   V+    L D +++AVK L     +        + E
Sbjct: 3   HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 434 IILFSKLQHRNLVKLLGC----CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
               + L H  +V +          G    ++ E++   +L   +  +     +   +  
Sbjct: 63  AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 119
Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD-ETEGNT 548
            +I    + L + HQ+    IIHRD+K +N+++      K+ DFG+ARA      +   T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             V+GT  Y++PE A       +SDV+S G +L E+++G+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK---ELKNE 433
            + T ++ +D + + + LG GG   V+    L D +++AVK L     +        + E
Sbjct: 3   HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 434 IILFSKLQHRNLVKLLGC----CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
               + L H  +V +          G    ++ E++   +L   +  +     +   +  
Sbjct: 63  AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 119
Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNT 548
            +I    + L + HQ+    IIHRD+K +N+++      K+ DFG+ARA      +   T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             V+GT  Y++PE A       +SDV+S G +L E+++G+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 33/218 (15%)
Query: 395 LGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQH----------- 442
           LG+G FG V K   A D +  A+K++ + +E+ L  + +E++L + L H           
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 443 --RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
             RN VK +          +  E+  N++L   I  +   +  D  + + +       L 
Sbjct: 73  ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD--EYWRLFRQILEALS 130
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD------------ETEGNT 548
           Y+H      IIHRDLK  N+ +D+  N KI DFGLA+                  +  N 
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 549 NRVVGTYGYMAPEYAS-DGQFSVKSDVFSFGILLLEIV 585
              +GT  Y+A E     G ++ K D++S GI+  E++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 32  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 89
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 90  LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 137
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 138 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMVPFVVTR 191
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G ++ E++ G
Sbjct: 192 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 24  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 82  LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 183
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 184 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 35  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 93  LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 140
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 141 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 194
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 195 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 12/214 (5%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADEQEIAV-KRLS--KISEQGLKELKNEIILFS 438
           + +  +++ +   +G G +G   K     + +I V K L    ++E   + L +E+ L  
Sbjct: 1   MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 439 KLQHRNLVKLLGCCIHGEEKLL--IYEFMPNKSLDSFIFD--QERCKLLDWSKRFHIICG 494
           +L+H N+V+     I      L  + E+     L S I    +ER + LD      ++  
Sbjct: 61  ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQ 119
Query: 495 TARGLLYLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
               L   H+  D    ++HRDLK +NV LD   N K+ DFGLAR    D +   T   V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FV 177
Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           GT  YM+PE  +   ++ KSD++S G LL E+ +
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 394 KLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNLVKLLGC 451
           KLGEG +  VYKG +   +  +A+K +    E+G       E+ L   L+H N+V L   
Sbjct: 9   KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 452 CIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
            IH E+ L L++E++ +K L  ++ D      +   K F  +    RGL Y H   R ++
Sbjct: 69  -IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLF--LFQLLRGLAYCH---RQKV 121
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YASDGQFS 569
           +HRDLK  N+L+++    K++DFGLARA     T+   N VV T  Y  P+       +S
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARA-KSIPTKTYDNEVV-TLWYRPPDILLGSTDYS 179
Query: 570 VKSDVFSFGILLLEIVSGK 588
            + D++  G +  E+ +G+
Sbjct: 180 TQIDMWGVGCIFYEMATGR 198

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   +C+ L      + +    RGL Y+H  +   ++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 253

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 23  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 81  LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 128
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 129 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 182
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 31  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 89  LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 190
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 68  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 126 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 227
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 24  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 82  LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 183
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 24  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 82  LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 183
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 13/222 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           D++ I+++LG G FG V++ T  A     A K +    E   + ++ EI   S L+H  L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF-HIICGTARGLLYLHQ 504
           V L        E ++IYEFM    L   + D+      D +  +   +C   +GL ++H+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC---KGLCHMHE 273
Query: 505 DSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           ++    +H DLK  N++     +   K+ DFGL       + + +     GT  + APE 
Sbjct: 274 NN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEV 327
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIR 604
           A        +D++S G+L   ++SG    G  + D  L  ++
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 369

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 107/216 (49%), Gaps = 20/216 (9%)
Query: 380 ATIANATDNFSINKKLGEGGFGPVYKG--TLADEQEIAVKRLS-KISEQGLKELK-NEII 435
           A  A + D +    KLGEG +G VYK   T+ +E  +A+KR+  +  E+G+      E+ 
Sbjct: 27  APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNET-VAIKRIRLEHEEEGVPGTAIREVS 85
Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           L  +LQHRN+++L     H     LI+E+  N  L  ++ D+     +   K F  +   
Sbjct: 86  LLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM-DKNPDVSMRVIKSF--LYQL 141
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNP--KISDFGLARAFGGDETEGNTNR 550
             G+ + H  SR R +HRDLK  N+LL   D    P  KI DFGLARAF G      T+ 
Sbjct: 142 INGVNFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHE 197
Query: 551 VVGTYGYMAPE-YASDGQFSVKSDVFSFGILLLEIV 585
           ++ T  Y  PE       +S   D++S   +  E++
Sbjct: 198 II-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 29  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 86
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 87  LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 134
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 135 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 188
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 189 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 31  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 89  LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 190
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V+K +      +  ++L  +  +    ++N+II   ++ H    
Sbjct: 9   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 66
Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R       K   +     +GL YL
Sbjct: 67  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 123
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 124 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYMSPER 177
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNR 591
                +SV+SD++S G+ L+E+  G+  R
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYPR 206

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D   C++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 190 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 42/247 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V     +    +IAVK+LS+  +  +  K    E+ L 
Sbjct: 45  TIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL 104
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P  SL+ F             + +  +C KL 
Sbjct: 105 KHMKHENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLT 152
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 153 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 207
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL 602
             G     V T  Y APE   +   +++  D++S G ++ E+++G   R  +   + +N 
Sbjct: 208 MTG----YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG---RTLFPGTDHINQ 260
Query: 603 IRHAWKL 609
           ++   +L
Sbjct: 261 LQQIMRL 267

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V+K +      +  ++L  +  +    ++N+II   ++ H    
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 63
Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R       K   +     +GL YL
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 174
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 68  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D   C++    LD  +  +++   
Sbjct: 126 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 227
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V+K +      +  ++L  +  +    ++N+II   ++ H    
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 63
Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R       K   +     +GL YL
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 174
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V+K +      +  ++L  +  +    ++N+II   ++ H    
Sbjct: 68  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 125
Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R       K   +     +GL YL
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 182
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 183 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 236
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGR 262

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V+K +      +  ++L  +  +    ++N+II   ++ H    
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 63
Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R       K   +     +GL YL
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 174
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V+K +      +  ++L  +  +    ++N+II   ++ H    
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 63
Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R       K   +     +GL YL
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 174
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V+K +      +  ++L  +  +    ++N+II   ++ H    
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 63
Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R       K   +     +GL YL
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 120
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 174
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D    ++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 12/214 (5%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADEQEIAV-KRLS--KISEQGLKELKNEIILFS 438
           + +  +++ +   +G G +G   K     + +I V K L    ++E   + L +E+ L  
Sbjct: 1   MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 439 KLQHRNLVKLLGCCIHGEEKLL--IYEFMPNKSLDSFIFD--QERCKLLDWSKRFHIICG 494
           +L+H N+V+     I      L  + E+     L S I    +ER + LD      ++  
Sbjct: 61  ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQ 119
Query: 495 TARGLLYLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
               L   H+  D    ++HRDLK +NV LD   N K+ DFGLAR    D  E      V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--EDFAKEFV 177
Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           GT  YM+PE  +   ++ KSD++S G LL E+ +
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 11/221 (4%)
Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           D++ I+++LG G FG V++ T  A     A K +    E   + ++ EI   S L+H  L
Sbjct: 51  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V L        E ++IYEFM    L   + D+      D +  +  +    +GL ++H++
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--MRQVCKGLCHMHEN 168
Query: 506 SRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
           +    +H DLK  N++     +   K+ DFGL       + + +     GT  + APE A
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVA 222
Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIR 604
                   +D++S G+L   ++SG    G  + D  L  ++
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 263

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 16/207 (7%)
Query: 388 NFSINKKLGEGGFGPVY---KGTLADEQEIAVKRLSKISEQGLKE---LKNEIILFSKLQ 441
           +F + K LG+G FG V+   K T  D   +   ++ K +   +++    K E  + + + 
Sbjct: 29  HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H  +VKL       E KL LI +F+  +  D F    +     +   +F++    A GL 
Sbjct: 89  HPFVVKL-HYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYL-AELALGLD 144
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           +LH    L II+RDLK  N+LLD++ + K++DFGL++     + E       GT  YMAP
Sbjct: 145 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--AIDHEKKAYSFCGTVEYMAP 199
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSG 587
           E  +    S  +D +S+G+L+ E+++G
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLTG 226

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 395 LGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQH----------- 442
           LG+G FG V K   A D +  A+K++ + +E+ L  + +E++L + L H           
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 443 --RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
             RN VK +          +  E+  N +L   I  +   +  D  + + +       L 
Sbjct: 73  ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD--EYWRLFRQILEALS 130
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD------------ETEGNT 548
           Y+H      IIHRDLK  N+ +D+  N KI DFGLA+                  +  N 
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 549 NRVVGTYGYMAPEYAS-DGQFSVKSDVFSFGILLLEIV 585
              +GT  Y+A E     G ++ K D++S GI+  E++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V+K +      +  ++L  +  +    ++N+II   ++ H    
Sbjct: 25  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 82
Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R       K   +     +GL YL
Sbjct: 83  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 139
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 140 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 193
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGR 219

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G  I      +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 70  HPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAY 126
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+  +   K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPE 182
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +  +F+  SDV+ FG+ + EI+
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR--- 443
           D+F    +LG G  G V+K +      +  ++L  +  +    ++N+II   ++ H    
Sbjct: 33  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK--PAIRNQIIRELQVLHECNS 90
Query: 444 -NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R       K   +     +GL YL
Sbjct: 91  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYL 147
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
            +  + +I+HRD+K SN+L++     K+ DFG++    G   +   N  VGT  YM+PE 
Sbjct: 148 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 201
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGR 227

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D    ++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 13/208 (6%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKL 440
             DNF   + LG+G FG V    + +  ++ AVK L K   + +  ++    E  + S  
Sbjct: 21  GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 441 QHRNLVKLLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           ++   +  L CC    ++L  + EF+    L   +F  ++ +  D ++           L
Sbjct: 81  RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEIISAL 137
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           ++LH      II+RDLK  NVLLD + + K++DFG+ +   G      T    GT  Y+A
Sbjct: 138 MFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKE--GICNGVTTATFCGTPDYIA 192
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE   +  +    D ++ G+LL E++ G
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCG 220

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G  I      +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 70  HPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 126
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+  +   K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 182
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +  +F+  SDV+ FG+ + EI+
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G  I      +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 70  HPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 126
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+  +   K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 182
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +  +F+  SDV+ FG+ + EI+
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 376 LFELATIANATDNFSINKK-------LGEGGFGPVYKGTLADEQE----IAVKRLSKISE 424
           L+    + ++T ++ I ++       +GEG FG V++G     +     +A+K     + 
Sbjct: 20  LYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS 79
Query: 425 QGLKE-LKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLL 483
             ++E    E +   +  H ++VKL+G  I      +I E      L SF+  Q R   L
Sbjct: 80  DSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSL 136
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D +         +  L YL      R +HRD+ A NVL+  +   K+ DFGL+R +  D 
Sbjct: 137 DLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDS 192
Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIV 585
           T    ++      +MAPE  +  +F+  SDV+ FG+ + EI+
Sbjct: 193 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 27/227 (11%)
Query: 375 PLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKEL 430
           P+F+     N  D+F I + +G+G FG V      D +++ A+K ++K   +    ++ +
Sbjct: 4   PVFDENEDVNF-DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNV 62
Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDW 485
             E+ +   L+H  LV L       E+  ++ + +    L   +     F +E  KL   
Sbjct: 63  FKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF-- 120
Query: 486 SKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE 545
                 IC     L YL      RIIHRD+K  N+LLD+  +  I+DF +A A    ET+
Sbjct: 121 ------ICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIA-AMLPRETQ 170
Query: 546 GNTNRVVGTYGYMAPEYASDGQ---FSVKSDVFSFGILLLEIVSGKK 589
             T  + GT  YMAPE  S  +   +S   D +S G+   E++ G++
Sbjct: 171 ITT--MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKISEQGLKELKN--EIILFSKLQHRNLVK 447
           + +G G +G V   Y   L   Q++AVK+LS+  +  +   +   E+ L   L+H N++ 
Sbjct: 26  RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 448 LL-----GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           LL        I    ++ +   +    L++ +    +C+ L       ++    RGL Y+
Sbjct: 84  LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYI 139
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H      IIHRDLK SNV +++D   +I DFGLAR    +E  G     V T  Y APE 
Sbjct: 140 HSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQ-ADEEMTG----YVATRWYRAPEI 191
Query: 563 ASD-GQFSVKSDVFSFGILLLEIVSGK 588
             +   ++   D++S G ++ E++ GK
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGK 218

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 12  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G  I      +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 72  HPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 128
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+  +   K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 129 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 184
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +  +F+  SDV+ FG+ + EI+
Sbjct: 185 SINFRRFTSASDVWMFGVCMWEIL 208

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G  I      +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 67  HPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 123
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+  +   K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 124 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 179
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +  +F+  SDV+ FG+ + EI+
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEIL 203

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 13  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G  I      +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 73  HPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 129
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+  +   K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 130 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 185
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +  +F+  SDV+ FG+ + EI+
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEIL 209

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G  I      +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 75  HPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 131
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+  +   K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 132 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 187
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +  +F+  SDV+ FG+ + EI+
Sbjct: 188 SINFRRFTSASDVWMFGVCMWEIL 211

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 12/214 (5%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADEQEIAV-KRLS--KISEQGLKELKNEIILFS 438
           + +  +++ +   +G G +G   K     + +I V K L    ++E   + L +E+ L  
Sbjct: 1   MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 439 KLQHRNLVKLLGCCIHGEEKLL--IYEFMPNKSLDSFIFD--QERCKLLDWSKRFHIICG 494
           +L+H N+V+     I      L  + E+     L S I    +ER + LD      ++  
Sbjct: 61  ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER-QYLDEEFVLRVMTQ 119
Query: 495 TARGLLYLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
               L   H+  D    ++HRDLK +NV LD   N K+ DFGLAR    D +       V
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--FV 177
Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           GT  YM+PE  +   ++ KSD++S G LL E+ +
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D    ++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D    ++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKISEQGLKELKN--EIILFSKLQHRNLVK 447
           + +G G +G V   Y   L   Q++AVK+LS+  +  +   +   E+ L   L+H N++ 
Sbjct: 34  RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 448 LL-----GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           LL        I    ++ +   +    L++ +    +C+ L       ++    RGL Y+
Sbjct: 92  LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYI 147
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H      IIHRDLK SNV +++D   +I DFGLAR    +E  G     V T  Y APE 
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQ-ADEEMTG----YVATRWYRAPEI 199
Query: 563 ASD-GQFSVKSDVFSFGILLLEIVSGK 588
             +   ++   D++S G ++ E++ GK
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK---ELKNE 433
            + T ++ +D + + + LG GG   V+    L   +++AVK L     +        + E
Sbjct: 3   HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 434 IILFSKLQHRNLVKLLGC----CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
               + L H  +V +          G    ++ E++   +L   +  +     +   +  
Sbjct: 63  AQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 119
Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNT 548
            +I    + L + HQ+    IIHRD+K +N+++      K+ DFG+ARA      +   T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             V+GT  Y++PE A       +SDV+S G +L E+++G+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 37/212 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  E+ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P KSL+ F        + D    ++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y APE      +    D++S G ++ E++ G
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 41/276 (14%)
Query: 393 KKLGEGGFG-PVYKGTLADEQEIAVKRL--SKISEQGLKELKNEIILFSKLQHRNLVKLL 449
           +K+GEG FG  +   +  D ++  +K +  S++S +  +E + E+ + + ++H N+V+  
Sbjct: 30  QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQ-----ERCKLLDWSKRFHIICGTARGLLYLHQ 504
                     ++ ++     L   I  Q     +  ++LDW   F  IC      L L  
Sbjct: 90  ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW---FVQIC------LALKH 140
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS 564
               +I+HRD+K+ N+ L +D   ++ DFG+AR    + T       +GT  Y++PE   
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEICE 198
Query: 565 DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK 624
           +  ++ KSD+++ G +L E+ +                ++HA++    G    L+     
Sbjct: 199 NKPYNNKSDIWALGCVLYELCT----------------LKHAFE---AGSMKNLVLKIIS 239
Query: 625 DSFNLAEVIRCIHIGLLCVQQY---PEDRPCMPSVI 657
            SF    +     +  L  Q +   P DRP + S++
Sbjct: 240 GSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 386 TDNFSINKKLGEGGFGPVYK---GTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH 442
           +DN+ + ++LG+G F  V +    T   E    +    K+S +  ++L+ E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+V+L           L+++ +    L   I  +E     D S   H I      + Y 
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 121
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           H +    I+HR+LK  N+LL         K++DFGLA      E     +   GT GY++
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLS 175
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      +S   D+++ G++L  ++ G
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 40/230 (17%)
Query: 378 ELA-TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNE 433
           ELA TI    + +     +G G +G V           +AVK+LS+  +  +  K    E
Sbjct: 8   ELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC 480
           + L   ++H N++ LL              F P +SL+ F             + +  +C
Sbjct: 68  LRLLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKC 115
Query: 481 -KLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 539
            KL D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR  
Sbjct: 116 AKLTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-- 169
Query: 540 GGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
               T+      V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 170 ---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 386 TDNFSINKKLGEGGFGPVYK---GTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH 442
           +DN+ + ++LG+G F  V +    T   E    +    K+S +  ++L+ E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+V+L           L+++ +    L   I  +E     D S   H I      + Y 
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 121
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           H +    I+HR+LK  N+LL         K++DFGLA      E     +   GT GY++
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLS 175
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      +S   D+++ G++L  ++ G
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK-ELKNEIILFSK 439
           D+F I + LG+G FG VY   LA E++    +A+K L  S+I ++G++ +L+ EI + + 
Sbjct: 23  DDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH 79
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFHIICG 494
           L H N+++L           LI E+ P   L      S  FD++R           I+  
Sbjct: 80  LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT--------IMEE 131
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
            A  L+Y H     ++IHRD+K  N+LL      KI+DFG    +           + GT
Sbjct: 132 LADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGT 184
Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
             Y+ PE       + K D++  G+L  E++ G
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 32/188 (17%)
Query: 414 IAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLD 471
           +AVK+LS+   ++   K    E++L   + H+N++ LL              F P K+L+
Sbjct: 52  VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLE 99
Query: 472 SF--------IFDQERCKL----LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASN 519
            F        + D   C++    LD  +  +++     G+ +LH      IIHRDLK SN
Sbjct: 100 EFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 156
Query: 520 VLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGI 579
           +++  D   KI DFGLAR      T       V T  Y APE      ++   D++S G 
Sbjct: 157 IVVKSDCTLKILDFGLARTAC---TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGC 213
Query: 580 LLLEIVSG 587
           ++ E+V G
Sbjct: 214 IMGELVKG 221

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 386 TDNFSINKKLGEGGFGPVYK---GTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH 442
           +DN+ + ++LG+G F  V +    T   E    +    K+S +  ++L+ E  +  KLQH
Sbjct: 4   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+V+L           L+++ +    L   I  +E     D S   H I      + Y 
Sbjct: 64  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 120
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           H +    I+HR+LK  N+LL         K++DFGLA      E     +   GT GY++
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLS 174
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      +S   D+++ G++L  ++ G
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVG 202

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G  I      +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 70  HPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAY 126
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+      K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 182
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +  +F+  SDV+ FG+ + EI+
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEIL 206

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 55/258 (21%)
Query: 414 IAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLD 471
           +AVK+LS+   ++   K    E++L   + H+N++ LL              F P K+L+
Sbjct: 50  VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLE 97
Query: 472 SF--------IFDQERCKL----LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASN 519
            F        + D   C++    LD  +  +++     G+ +LH      IIHRDLK SN
Sbjct: 98  EFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSN 154
Query: 520 VLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGI 579
           +++  D   KI DFGLAR      T       V T  Y APE      +    D++S G 
Sbjct: 155 IVVKSDCTLKILDFGLARTAS---TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 211
Query: 580 LLLEIVSGKKN-RGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHI 638
           ++ E+V G    +G  H D    +I         G PS    A  + +            
Sbjct: 212 IMGELVKGSVIFQGTDHIDQWNKVIEQL------GTPSAEFMAALQPT------------ 253
Query: 639 GLLCVQQYPEDRPCMPSV 656
               V+ Y E+RP  P +
Sbjct: 254 ----VRNYVENRPAYPGI 267

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 23  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D    ++    LD  +  +++   
Sbjct: 81  LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 128
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 129 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTR 182
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 86/174 (49%), Gaps = 28/174 (16%)
Query: 427 LKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF--------MPNKSLDSFIFDQE 478
           ++++  EI +  KL H N+VKL+       E  L   F        M   +L     DQ 
Sbjct: 80  IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 479 RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
           R    D  K          G+ YLH     +IIHRD+K SN+L+ +D + KI+DFG++  
Sbjct: 140 RFYFQDLIK----------GIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 539 F-GGDETEGNTNRVVGTYGYMAPEYASDGQ--FSVKS-DVFSFGILLLEIVSGK 588
           F G D    NT   VGT  +MAPE  S+ +  FS K+ DV++ G+ L   V G+
Sbjct: 187 FKGSDALLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 91  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 148 RDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 208 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 249

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLK-ELKNEIILFSKLQ 441
           D +     LG G F  V    LA+++     +A+K ++K + +G +  ++NEI +  K++
Sbjct: 18  DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 74
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N+V L      G    LI + +    L   I ++      D S+   +I      + Y
Sbjct: 75  HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKY 131
Query: 502 LHQDSRLRIIHRDLKASNVL---LDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGY 557
           LH    L I+HRDLK  N+L   LD+D    ISDFGL++     E  G+  +   GT GY
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGY 184
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE  +   +S   D +S G++   ++ G
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 386 TDNFSINKKLGEGGFGPVYK---GTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH 442
           +DN+ + ++LG+G F  V +    T   E    +    K+S +  ++L+ E  +  KLQH
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+V+L           L+++ +    L   I  +E     D S   H I      + Y 
Sbjct: 88  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS---HCIQQILESIAYC 144
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           H +    I+HR+LK  N+LL         K++DFGLA      E     +   GT GY++
Sbjct: 145 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLS 198
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      +S   D+++ G++L  ++ G
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILYILLVG 226

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 91  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 208 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 249

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D    ++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 91  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 148 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 208 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 249

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 91  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 208 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 249

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 93  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 210 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 251

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 12  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 72  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 120 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 174
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 175 MAG----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 39  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 99  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 155
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 156 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 215
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 216 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 257

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 91  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 147
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 148 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 207
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 208 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 249

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 168 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 227
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 228 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 269

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK---ELKNE 433
            + T ++ +D + + + LG GG   V+    L   +++AVK L     +        + E
Sbjct: 3   HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 434 IILFSKLQHRNLVKLLGC----CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
               + L H  +V +          G    ++ E++   +L   +  +     +   +  
Sbjct: 63  AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 119
Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNT 548
            +I    + L + HQ+    IIHRD+K +N+++      K+ DFG+ARA      +   T
Sbjct: 120 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             V+GT  Y++PE A       +SDV+S G +L E+++G+
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVK 447
           K +G G  G V   Y   L  ++ +A+K+LS+   ++   K    E++L   + H+N++ 
Sbjct: 30  KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKL----LDWSKRFHIICGT 495
           LL              F P K+L+ F        + D    ++    LD  +  +++   
Sbjct: 88  LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   T       V T 
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG---TSFMMTPYVVTR 189
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y APE      +    D++S G ++ E+V  K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 12  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 72  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 120 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 174
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 175 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLK-ELKNEIILFSKLQ 441
           D +     LG G F  V    LA+++     +A+K ++K + +G +  ++NEI +  K++
Sbjct: 18  DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N+V L      G    LI + +    L   I ++      D S+   +I      + Y
Sbjct: 75  HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKY 131
Query: 502 LHQDSRLRIIHRDLKASNVL---LDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGY 557
           LH    L I+HRDLK  N+L   LD+D    ISDFGL++     E  G+  +   GT GY
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGY 184
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE  +   +S   D +S G++   ++ G
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 19/200 (9%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSKI-SEQGLK---ELKNEIILFSKLQHRNLVKLLG 450
           LG G FG V+K    +E    +K  +KI   +G+K   E+KNEI + ++L H NL++L  
Sbjct: 97  LGGGRFGQVHK---CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 451 CCIHGEEKLLIYEFMPNKSL-DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
                 + +L+ E++    L D  I +      LD       IC    G+ ++HQ   + 
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC---EGIRHMHQ---MY 207
Query: 510 IIHRDLKASNVL-LDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
           I+H DLK  N+L +++D    KI DFGLAR +   E         GT  ++APE  +   
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVVNYDF 264
Query: 568 FSVKSDVFSFGILLLEIVSG 587
            S  +D++S G++   ++SG
Sbjct: 265 VSFPTDMWSVGVIAYMLLSG 284

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 22  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 82  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 130 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 184
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 185 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 36  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 96  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 143
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 144 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 198
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 199 MXGX----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MAG----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MAG----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 393 KKLGEGGFGPV---YKGTLADEQEIAVKRLSKISEQGLKELKN--EIILFSKLQHRNLVK 447
           + +G G +G V   Y   L   Q++AVK+LS+  +  +   +   E+ L   L+H N++ 
Sbjct: 34  RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 448 LL-----GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           LL        I    ++ +   +    L++ +  Q    L D   +F ++    RGL Y+
Sbjct: 92  LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ---ALSDEHVQF-LVYQLLRGLKYI 147
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H      IIHRDLK SNV +++D   +I DFGLAR    +E  G     V T  Y APE 
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQ-ADEEMTG----YVATRWYRAPEI 199
Query: 563 ASD-GQFSVKSDVFSFGILLLEIVSGK 588
             +   ++   D++S G ++ E++ GK
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLK-ELKNEIILFSKLQ 441
           D +     LG G F  V    LA+++     +A+K ++K + +G +  ++NEI +  K++
Sbjct: 18  DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N+V L      G    LI + +    L   I ++      D S+   +I      + Y
Sbjct: 75  HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKY 131
Query: 502 LHQDSRLRIIHRDLKASNVL---LDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGY 557
           LH    L I+HRDLK  N+L   LD+D    ISDFGL++     E  G+  +   GT GY
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGY 184
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE  +   +S   D +S G++   ++ G
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLK-ELKNEIILFSKLQ 441
           D +     LG G F  V    LA+++     +A+K ++K + +G +  ++NEI +  K++
Sbjct: 18  DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N+V L      G    LI + +    L   I ++      D S+   +I      + Y
Sbjct: 75  HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKY 131
Query: 502 LHQDSRLRIIHRDLKASNVL---LDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGY 557
           LH    L I+HRDLK  N+L   LD+D    ISDFGL++     E  G+  +   GT GY
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM----EDPGSVLSTACGTPGY 184
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE  +   +S   D +S G++   ++ G
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKELK-NEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 253

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 152 RDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 253

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLK---ELKNE 433
            + T ++ +D + + + LG GG   V+    L   +++AVK L     +        + E
Sbjct: 20  HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 79
Query: 434 IILFSKLQHRNLVKLLGC----CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
               + L H  +V +          G    ++ E++   +L   +  +     +   +  
Sbjct: 80  AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAI 136
Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNT 548
            +I    + L + HQ+    IIHRD+K +N+++      K+ DFG+ARA      +   T
Sbjct: 137 EVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             V+GT  Y++PE A       +SDV+S G +L E+++G+
Sbjct: 194 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 35  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 95  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 142
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR      
Sbjct: 143 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 193
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           T+      V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 194 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 395 LGEGGFGPVYKGTLADEQEI-AVKR-LSKISEQGLKELK-NEIILFSKLQHRNLVKLLGC 451
           +GEG +G V K    D   I A+K+ L    ++ +K++   EI L  +L+H NLV LL  
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 452 CIHGEEKLLIYEFMPNKSLDSF-IFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI 510
           C   +   L++EF+ +  LD   +F       +     F II G   G  + H      I
Sbjct: 93  CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI--GFCHSHN-----I 145
Query: 511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YASDGQFS 569
           IHRD+K  N+L+ Q    K+ DFG AR         +    V T  Y APE    D ++ 
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--VATRWYRAPELLVGDVKYG 203
Query: 570 VKSDVFSFGILLLEIVSGK 588
              DV++ G L+ E+  G+
Sbjct: 204 KAVDVWAIGCLVTEMFMGE 222

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 36  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 96  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 143
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR      
Sbjct: 144 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 194
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           T+      V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 195 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 28/235 (11%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++      
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 105
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI----IC----GTARGLLYLHQ 504
           I+   +    E M +  L + +   +  KLL   K  H+    IC       RGL Y+H 
Sbjct: 106 INDIIRAPTIEQMKDVYLVTHLMGADLYKLL---KTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYA 563
            +   ++HRDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE  
Sbjct: 163 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 564 SDGQFSVKS-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
            + +   KS D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 269

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 26  TIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 85
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 86  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 133
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 134 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 188
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 189 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 23  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 83  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 131 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE 185
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 186 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 23  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 83  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 131 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE 185
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 186 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LSK  +  +  K    E+ L 
Sbjct: 28  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLL 87
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 88  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR      
Sbjct: 136 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 186
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           T+      V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
Query: 393 KKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL 448
           + LG GGFG V+   +    ++     + +      +G +    E  + +K+  R +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFD-QERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
                   +  L+   M    +   I++  E        +          GL +LHQ + 
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN- 309
Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
             II+RDLK  NVLLD D N +ISD GLA      +T+  T    GT G+MAPE     +
Sbjct: 310 --IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEE 365
Query: 568 FSVKSDVFSFGILLLEIVSGK 588
           +    D F+ G+ L E+++ +
Sbjct: 366 YDFSVDYFALGVTLYEMIAAR 386

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 96  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 152
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 212
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 213 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 254

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 37  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 97  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 153
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 154 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 213
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 214 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 255

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 28  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 88  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 144
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 145 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 204
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 205 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 246

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 23  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 83  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 131 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE 185
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 186 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 253

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 388 NFSINKKLGEGGFGPVY---KGTLADEQEIAVKRLSKISEQGLKE---LKNEIILFSKLQ 441
            F + K LG+G FG V+   K + +D +++   ++ K +   +++    K E  +  ++ 
Sbjct: 25  QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H  +VKL       E KL LI +F+  +  D F    +     +   +F++    A  L 
Sbjct: 85  HPFIVKL-HYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYL-AELALALD 140
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           +LH    L II+RDLK  N+LLD++ + K++DFGL++     + E       GT  YMAP
Sbjct: 141 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAP 195
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSG 587
           E  +    +  +D +SFG+L+ E+++G
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 89  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 145
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 206 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 247

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 395 LGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG GGFG V+   +    ++     + +      +G +    E  + +K+  R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFD-QERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
                 +  L+   M    +   I++  E        +          GL +LHQ +   
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFS 569
           II+RDLK  NVLLD D N +ISD GLA      +T+  T    GT G+MAPE     ++ 
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYD 367
Query: 570 VKSDVFSFGILLLEIVSGK 588
              D F+ G+ L E+++ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 20/219 (9%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK- 428
           L E+       D+F I + LG+G FG VY   LA E++    +A+K L  S++ ++G++ 
Sbjct: 4   LAEMPKRKFTIDDFDIGRPLGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEH 60
Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
           +L+ EI + S L+H N++++       +   L+ EF P   L   +    R    D  + 
Sbjct: 61  QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRS 117
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
              +   A  L Y H+    ++IHRD+K  N+L+      KI+DFG    +         
Sbjct: 118 ATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRR 170
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
             + GT  Y+ PE         K D++  G+L  E + G
Sbjct: 171 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 395 LGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG GGFG V+   +    ++     + +      +G +    E  + +K+  R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFD-QERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
                 +  L+   M    +   I++  E        +          GL +LHQ +   
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFS 569
           II+RDLK  NVLLD D N +ISD GLA      +T+  T    GT G+MAPE     ++ 
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYD 367
Query: 570 VKSDVFSFGILLLEIVSGK 588
              D F+ G+ L E+++ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 393 KKLGEGGFGPVY---KGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLL 449
           KKLG G +G V          E+ I + R + +S     +L  E+ +   L H N++KL 
Sbjct: 43  KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
                     L+ E      L   I  + +   +D +    II     G+ YLH+ +   
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYLHKHN--- 156
Query: 510 IIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           I+HRDLK  N+LL   ++D   KI DFGL+  F   E +      +GT  Y+APE     
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPEVLRK- 212
Query: 567 QFSVKSDVFSFGILLLEIVSG 587
           ++  K DV+S G++L  +++G
Sbjct: 213 KYDEKCDVWSIGVILFILLAG 233

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 395 LGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           LG GGFG V+   +    ++     + +      +G +    E  + +K+  R +V L  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFIFD-QERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
                 +  L+   M    +   I++  E        +          GL +LHQ +   
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--- 309
Query: 510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFS 569
           II+RDLK  NVLLD D N +ISD GLA      +T+  T    GT G+MAPE     ++ 
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYD 367
Query: 570 VKSDVFSFGILLLEIVSGK 588
              D F+ G+ L E+++ +
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 21  TIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 81  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 129 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDE 183
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 184 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +    +H N++ +    
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 93  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 150 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 210 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 251

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V        +  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 51  IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 513 RDLKASNVLLDQDMNPKISDFGLAR-AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+L++   + KI DFGLAR A    +  G     V T  Y APE   + +   K
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTK 227
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 228 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 269

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 109/255 (42%), Gaps = 42/255 (16%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQ--GLKELKNEIILFS 438
           + N + +F +   LGEG +G V   T     EI A+K++    +    L+ L+ EI +  
Sbjct: 6   VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 439 KLQHRNLVKLLGC-----CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
             +H N++ +          +  E  +I E M    L   I  Q    +L      + I 
Sbjct: 65  HFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQ----MLSDDHIQYFIY 119
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF---GGDETE----- 545
            T R +  LH  +   +IHRDLK SN+L++ + + K+ DFGLAR       D +E     
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 546 GNTNRVVGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLE------IVSGKKNR------- 591
                 V T  Y APE   +  ++S   DV+S G +L E      I  G+  R       
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
Query: 592 ---GFYHSDNKLNLI 603
              G  HSDN L  I
Sbjct: 237 GIIGTPHSDNDLRCI 251

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 112/251 (44%), Gaps = 43/251 (17%)
Query: 360 GTEQKNEDQNIDLDLPLF---EL-ATIANATDNFSINKKLGEGGFGPVYKG-TLADEQEI 414
           GTE      N   + P F   EL  TI    + +     +G G +G V           +
Sbjct: 14  GTENLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRV 73
Query: 415 AVKRLSKISEQGL--KELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDS 472
           AVK+LS+  +  +  K    E+ L   ++H N++ LL              F P +SL+ 
Sbjct: 74  AVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPARSLEE 121
Query: 473 F-------------IFDQERC-KLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKAS 518
           F             + +  +C KL D   +F +I    RGL Y+H      IIHRDLK S
Sbjct: 122 FNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPS 177
Query: 519 NVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSF 577
           N+ +++D   KI DFGLAR    DE  G     V T  Y APE   +   ++   D++S 
Sbjct: 178 NLAVNEDCELKILDFGLAR-HTDDEMXG----YVATRWYRAPEIMLNWMHYNQTVDIWSV 232
Query: 578 GILLLEIVSGK 588
           G ++ E+++G+
Sbjct: 233 GCIMAELLTGR 243

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 109/255 (42%), Gaps = 42/255 (16%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQ--GLKELKNEIILFS 438
           + N + +F +   LGEG +G V   T     EI A+K++    +    L+ L+ EI +  
Sbjct: 6   VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 439 KLQHRNLVKLLGC-----CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
             +H N++ +          +  E  +I E M    L   I  Q    +L      + I 
Sbjct: 65  HFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQ----MLSDDHIQYFIY 119
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF---GGDETE----- 545
            T R +  LH  +   +IHRDLK SN+L++ + + K+ DFGLAR       D +E     
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 546 GNTNRVVGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLE------IVSGKKNR------- 591
                 V T  Y APE   +  ++S   DV+S G +L E      I  G+  R       
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
Query: 592 ---GFYHSDNKLNLI 603
              G  HSDN L  I
Sbjct: 237 GIIGTPHSDNDLRCI 251

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G  I      +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 450 HPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAY 506
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+  +   K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 507 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 562
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +  +F+  SDV+ FG+ + EI+
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEIL 586

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 211
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 253

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 96  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 152
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 153 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK 212
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 213 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 254

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLK---ELKNEIILFSKLQHR 443
           ++ +   LG G FG V  G       ++AVK L++   + L    ++K EI      +H 
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           +++KL        +  ++ E++    L  +I    R + ++  + F  I        Y H
Sbjct: 72  HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD---YCH 128
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
              R  ++HRDLK  NVLLD  MN KI+DFGL+      E   ++    G+  Y APE  
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVI 182
Query: 564 SDGQFS-VKSDVFSFGILLLEIVSG 587
           S   ++  + D++S G++L  ++ G
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCG 207

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 33/218 (15%)
Query: 395 LGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQH----------- 442
           LG+G FG V K   A D +  A+K++ + +E+ L  + +E+ L + L H           
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 443 --RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
             RN VK            +  E+  N++L   I  +   +  D  + + +       L 
Sbjct: 73  ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD--EYWRLFRQILEALS 130
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD------------ETEGNT 548
           Y+H      IIHR+LK  N+ +D+  N KI DFGLA+                  +  N 
Sbjct: 131 YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 549 NRVVGTYGYMAPEYAS-DGQFSVKSDVFSFGILLLEIV 585
              +GT  Y+A E     G ++ K D +S GI+  E +
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +    +H N++ +    
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 93  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 149
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 150 RDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 209
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 210 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 251

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 388 NFSINKKLGEGGFGPVY---KGTLADEQEIAVKRLSKISEQGLKE---LKNEIILFSKLQ 441
            F + K LG+G FG V+   K + +D +++   ++ K +   +++    K E  +  ++ 
Sbjct: 25  QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H  +VKL       E KL LI +F+  +  D F    +     +   +F++    A  L 
Sbjct: 85  HPFIVKL-HYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYL-AELALALD 140
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           +LH    L II+RDLK  N+LLD++ + K++DFGL++     + E       GT  YMAP
Sbjct: 141 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAP 195
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSG 587
           E  +    +  +D +SFG+L+ E+++G
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 21  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 81  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 129 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDE 183
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 184 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 12  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 72  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 120 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 174
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 175 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 388 NFSINKKLGEGGFGPVY---KGTLADEQEIAVKRLSKISEQGLKE---LKNEIILFSKLQ 441
            F + K LG+G FG V+   K + +D +++   ++ K +   +++    K E  +  ++ 
Sbjct: 26  QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H  +VKL       E KL LI +F+  +  D F    +     +   +F++    A  L 
Sbjct: 86  HPFIVKL-HYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYL-AELALALD 141
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           +LH    L II+RDLK  N+LLD++ + K++DFGL++     + E       GT  YMAP
Sbjct: 142 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE--SIDHEKKAYSFCGTVEYMAP 196
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSG 587
           E  +    +  +D +SFG+L+ E+++G
Sbjct: 197 EVVNRRGHTQSADWWSFGVLMFEMLTG 223

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 27  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 87  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 134
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR      
Sbjct: 135 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-----H 185
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           T+      V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 186 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTGX----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 22  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 82  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 130 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 184
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 185 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 21  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 81  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 129 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 183
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 184 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 14/215 (6%)
Query: 379 LATIANATDNFSINKKLGEGGFGPV---YKGTLADEQEIAVKRLSKISEQGLKELKNEII 435
           +AT    TD++ + ++LG+G F  V    K T   E    +    K+S +  ++L+ E  
Sbjct: 23  MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           +   L+H N+V+L           L+++ +    L   I  +E     D S   H I  +
Sbjct: 83  ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILES 142
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVV 552
                ++HQ     I+HRDLK  N+LL    +    K++DFGLA    G++         
Sbjct: 143 VN---HIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG--FA 194
Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           GT GY++PE      +    D+++ G++L  ++ G
Sbjct: 195 GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 393 KKLGEGGFGPVYKGTLADEQEI-AVKR--LSKISEQGLKELKNEIILFSKLQHRNLVKLL 449
           +K+GEG +G V+K    +  EI A+KR  L    E        EI L  +L+H+N+V+L 
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 450 GCCIHGEEKL-LIYEFMPN---KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
              +H ++KL L++EF      K  DS   D      LD       +    +GL + H  
Sbjct: 68  DV-LHSDKKLTLVFEFCDQDLKKYFDSCNGD------LDPEIVKSFLFQLLKGLGFCHSR 120
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
           +   ++HRDLK  N+L++++   K++DFGLARAFG       +  VV T  Y  P+    
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFG 175
Query: 566 GQ-FSVKSDVFSFGILLLEIVSGKK 589
            + +S   D++S G +  E+ +  +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAAR 200

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 110/255 (43%), Gaps = 42/255 (16%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQ--GLKELKNEIILFS 438
           + N + +F +   LGEG +G V   T     EI A+K++    +    L+ L+ EI +  
Sbjct: 6   VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 439 KLQHRNLVKLLGC-----CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
             +H N++ +          +  E  +I E M    L   I  Q    +L      + I 
Sbjct: 65  HFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQ----MLSDDHIQYFIY 119
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF---GGDETEGNTNR 550
            T R +  LH  +   +IHRDLK SN+L++ + + K+ DFGLAR       D +E    +
Sbjct: 120 QTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 551 -----VVGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLE------IVSGKKNR------- 591
                 V T  Y APE   +  ++S   DV+S G +L E      I  G+  R       
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
Query: 592 ---GFYHSDNKLNLI 603
              G  HSDN L  I
Sbjct: 237 GIIGTPHSDNDLRCI 251

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 13  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 73  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 121 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 175
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 176 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 18  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 78  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 126 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDE 180
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 181 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 13  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 73  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 121 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 175
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 176 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 14  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 74  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 121
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR      
Sbjct: 122 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 172
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           T+      V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 173 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 18  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 78  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 126 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 180
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 181 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 21  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 81  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 129 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 183
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 184 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 22  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 82  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 130 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 184
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 185 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 15  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 75  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 122
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 123 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 177
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 178 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 35  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 95  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 142
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR      
Sbjct: 143 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 193
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           T+      V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 194 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 23  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 83  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 131 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 185
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 186 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A++++S    Q   +    EI +  + +H N++ +    
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 95  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 151
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 152 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 211
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G PSQ
Sbjct: 212 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPSQ 253

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLK---ELKNEIILFSKLQHR 443
           ++ +   LG G FG V  G       ++AVK L++   + L    ++K EI      +H 
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           +++KL        +  ++ E++    L  +I    R + ++  + F  I        Y H
Sbjct: 72  HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD---YCH 128
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
              R  ++HRDLK  NVLLD  MN KI+DFGL+      E    +    G+  Y APE  
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPEVI 182
Query: 564 SDGQFS-VKSDVFSFGILLLEIVSG 587
           S   ++  + D++S G++L  ++ G
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCG 207

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 28  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 88  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 136 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 190
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 191 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 28  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 88  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 135
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 136 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 190
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 191 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 39  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 99  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 146
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR      
Sbjct: 147 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 197
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           T+      V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 198 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 22  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 82  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 129
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 130 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDE 184
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 185 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 36  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 96  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 143
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR      
Sbjct: 144 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 194
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           T+      V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 195 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 18  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 78  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 126 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 180
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 181 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQHR 443
           F   + LG G F  V    LA+E+      AVK + K + +G +  ++NEI +  K++H 
Sbjct: 24  FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+V L           L+ + +    L   I ++      D S    +I      + YLH
Sbjct: 81  NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST---LIRQVLDAVYYLH 137
Query: 504 QDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
              R+ I+HRDLK  N+L    D++    ISDFGL++  G  +     +   GT GY+AP
Sbjct: 138 ---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV---MSTACGTPGYVAP 191
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSG 587
           E  +   +S   D +S G++   ++ G
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCG 218

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 18  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 78  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 125
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    DE
Sbjct: 126 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDE 180
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 181 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 27  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 87  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 134
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR      
Sbjct: 135 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-----H 185
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           T+      V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 186 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 386 TDNFSINKKLGEGGFGPVY----KGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
           +D +   KKLG G +G V     K T A+     +K+ S  +      L +E+ +  +L 
Sbjct: 20  SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSL-DSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N++KL           L+ E      L D  I  Q+  ++        ++ GT     
Sbjct: 80  HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT---- 135
Query: 501 YLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           YLH+ +   I+HRDLK  N+LL+   +D   KI DFGL+  F   E  G     +GT  Y
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYY 189
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE     ++  K DV+S G++L  ++ G
Sbjct: 190 IAPEVLRK-KYDEKCDVWSCGVILYILLCG 218

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 20/219 (9%)
Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRL--SKISEQGLK- 428
           L E+       D+F I + LG+G FG VY   LA E++    +A+K L  S++ ++G++ 
Sbjct: 3   LAEMPKRKFTIDDFDIVRPLGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEH 59
Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
           +L+ EI + S L+H N++++       +   L+ EF P   L   +    R    D  + 
Sbjct: 60  QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRS 116
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
              +   A  L Y H+    ++IHRD+K  N+L+      KI+DFG    +         
Sbjct: 117 ATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRR 169
Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
             + GT  Y+ PE         K D++  G+L  E + G
Sbjct: 170 RXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 394 KLGEGGFGPVYKGTLADEQEI-AVKRL-SKISEQGLKELKNEI-ILFSKLQHRNLVKLLG 450
           ++G G +G V K       +I AVKR+ S + E+  K+L  ++ ++        +V+  G
Sbjct: 29  EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 451 CCIHGEEKLLIYEFMPNKSLDSF------IFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
                 +  +  E M + S D F      + D     ++       I   T + L +L +
Sbjct: 89  ALFREGDCWICMELM-STSFDKFYKYVYSVLDD----VIPEEILGKITLATVKALNHLKE 143
Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE--- 561
           +  L+IIHRD+K SN+LLD+  N K+ DFG++   G         R  G   YMAPE   
Sbjct: 144 N--LKIIHRDIKPSNILLDRSGNIKLCDFGIS---GQLVDSIAKTRDAGCRPYMAPERID 198
Query: 562 -YASDGQFSVKSDVFSFGILLLEIVSGK 588
             AS   + V+SDV+S GI L E+ +G+
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGR 226

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G  I      +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 450 HPHIVKLIGV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAY 506
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+      K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 507 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 562
Query: 562 YASDGQFSVKSDVFSFGILLLEIV 585
             +  +F+  SDV+ FG+ + EI+
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEIL 586

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 395 LGEGGFGPVYKGTLADEQE-IAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGC 451
           +G G +G V         E +A+K+LS+   SE   K    E++L   +QH N++ LL  
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 452 CIHGEEKLLIYEF---MPNKSLD-----SFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
                     Y+F   MP    D        F +E+ +        +++    +GL Y+H
Sbjct: 92  FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQ--------YLVYQMLKGLKYIH 143
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
                 ++HRDLK  N+ +++D   KI DFGLAR       +      V T  Y APE  
Sbjct: 144 SAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVI 195
Query: 564 -SDGQFSVKSDVFSFGILLLEIVSGK 588
            S   ++   D++S G ++ E+++GK
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGK 221

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLLGCC 452
           +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H N++ +    
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
                + +   ++    +++ ++   + + L      + +    RGL Y+H  +   ++H
Sbjct: 89  RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLH 145
Query: 513 RDLKASNVLLDQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVK 571
           RDLK SN+LL+   + KI DFGLAR    D    G     V T  Y APE   + +   K
Sbjct: 146 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK 205
Query: 572 S-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           S D++S G +L E++S   NR  +   + L+ + H   +   G P Q
Sbjct: 206 SIDIWSVGCILAEMLS---NRPIFPGKHYLDQLNHILGIL--GSPEQ 247

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 395 LGEGGFGPVYKGTLADEQE-IAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGC 451
           +G G +G V         E +A+K+LS+   SE   K    E++L   +QH N++ LL  
Sbjct: 50  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 452 CIHGEEKLLIYEF---MPNKSLD-----SFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
                     Y+F   MP    D        F +E+ +        +++    +GL Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQ--------YLVYQMLKGLKYIH 161
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
                 ++HRDLK  N+ +++D   KI DFGLAR       +      V T  Y APE  
Sbjct: 162 SAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVI 213
Query: 564 -SDGQFSVKSDVFSFGILLLEIVSGK 588
            S   ++   D++S G ++ E+++GK
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGK 239

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 393 KKLGEGGFGPVY---KGTLADEQEIAVKRLSKIS-----------EQGLKELKNEIILFS 438
           +KLG G +G V    +     E+ I V + S+             E+  +E+ NEI L  
Sbjct: 42  RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 439 KLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
            L H N++KL       +   L+ EF     L   I ++ +    D     +I+     G
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSG 158
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           + YLH+ +   I+HRD+K  N+LL+     +N KI DFGL+  F  D    +    +GT 
Sbjct: 159 ICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR---LGTA 212
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            Y+APE     +++ K DV+S G+++  ++ G
Sbjct: 213 YYIAPEVLK-KKYNEKCDVWSCGVIMYILLCG 243

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLK---ELKNEIILFSKLQHR 443
           ++ +   LG G FG V  G       ++AVK L++   + L    +++ EI      +H 
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           +++KL        +  ++ E++    L  +I    R   LD  +   +      G+ Y H
Sbjct: 77  HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCH 133
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
              R  ++HRDLK  NVLLD  MN KI+DFGL+      E    +    G+  Y APE  
Sbjct: 134 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVI 187
Query: 564 SDGQFS-VKSDVFSFGILLLEIVSG 587
           S   ++  + D++S G++L  ++ G
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCG 212

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 34/226 (15%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKN--EIILFSKLQ-HRN 444
           + + KKLG+G +G V+K       E+ AVK++    +      +   EI++ ++L  H N
Sbjct: 11  YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 445 LVKLLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           +V LL       ++   L++++M    L + I    R  +L+   + +++    + + YL
Sbjct: 71  IVNLLNVLRADNDRDVYLVFDYMET-DLHAVI----RANILEPVHKQYVVYQLIKVIKYL 125
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG-------------------DE 543
           H      ++HRD+K SN+LL+ + + K++DFGL+R+F                     D+
Sbjct: 126 HSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 544 TEGNTNRVVGTYGYMAPE-YASDGQFSVKSDVFSFGILLLEIVSGK 588
            +      V T  Y APE      +++   D++S G +L EI+ GK
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI D+GLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELKNEIILFSKLQH 442
           + F   + LG+GGFG V    +    ++     +++      +G     NE  +  K+  
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH---IICGTARGL 499
           R +V L       +   L+   M    L   I+   +    +    F+   I CG    L
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG----L 299
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR-VVGTYGYM 558
             LH   R RI++RDLK  N+LLD   + +ISD GLA        EG T +  VGT GYM
Sbjct: 300 EDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV----PEGQTIKGRVGTVGYM 352
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE   + +++   D ++ G LL E+++G+
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFG-GDETEGNTNRV 551
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA     G+E +     +
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----I 177
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 178 FGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSKISEQGL---KELKNEIIL---------FSKLQH 442
           +G+G +G V++G L   + +AVK  S   EQ      E+ N ++L          S +  
Sbjct: 16  VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           RN    L    H  E   +Y+F+  ++L+  +                +    A GL +L
Sbjct: 75  RNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL-------------ALRLAVSAACGLAHL 121
Query: 503 HQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTNRVVGTY 555
           H +      +  I HRD K+ NVL+  ++   I+D GLA   + G D  +   N  VGT 
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 556 GYMAPEYASDGQFSVK-------SDVFSFGILLLEI 584
            YMAPE   D Q           +D+++FG++L EI
Sbjct: 182 RYMAPEVL-DEQIRTDCFESYKWTDIWAFGLVLWEI 216

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 34/241 (14%)
Query: 374 LPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGL---KEL 430
           LP     T+A      ++ + +G+G +G V++G+   E  +AVK  S   E+      EL
Sbjct: 27  LPFLVQRTVAR---QITLLECVGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSWFRETEL 82
Query: 431 KNEIILFSKLQHRNLVKLLGCCI---HGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWS 486
            N ++L    +H N++  +   +   H   +L LI  +    SL    +D  +   LD  
Sbjct: 83  YNTVML----RHENILGFIASDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTV 134
Query: 487 KRFHIICGTARGLLYLH-----QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAF 539
               I+   A GL +LH        +  I HRDLK+ N+L+ ++    I+D GLA   + 
Sbjct: 135 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 194
Query: 540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSV-------KSDVFSFGILLLEIVSGKKNRG 592
             ++ +   N  VGT  YMAPE   D    V       + D+++FG++L E+     + G
Sbjct: 195 STNQLDVGNNPRVGTKRYMAPEVL-DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNG 253
Query: 593 F 593
Sbjct: 254 I 254

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELKNEIILFSKLQH 442
           + F   + LG+GGFG V    +    ++     +++      +G     NE  +  K+  
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH---IICGTARGL 499
           R +V L       +   L+   M    L   I+   +    +    F+   I CG    L
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG----L 299
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR-VVGTYGYM 558
             LH   R RI++RDLK  N+LLD   + +ISD GLA        EG T +  VGT GYM
Sbjct: 300 EDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV----PEGQTIKGRVGTVGYM 352
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE   + +++   D ++ G LL E+++G+
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 19/210 (9%)
Query: 386 TDNFSINKKLGEGGFGPVY----KGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
           +D +   KKLG G +G V     K T A+     +K+ S  +      L +E+ +  +L 
Sbjct: 3   SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSL-DSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           H N++KL           L+ E      L D  I  Q+  ++        ++ GT     
Sbjct: 63  HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT---- 118
Query: 501 YLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           YLH+ +   I+HRDLK  N+LL+   +D   KI DFGL+  F   E  G     +GT  Y
Sbjct: 119 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGTAYY 172
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE     ++  K DV+S G++L  ++ G
Sbjct: 173 IAPEVLRK-KYDEKCDVWSCGVILYILLCG 201

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF----------------IFDQERCK 481
             ++H N++ LL              F P +SL+ F                I   +  K
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQ--K 121
Query: 482 LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
           L D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTD 176
Query: 542 DETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           DE  G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 177 DEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DF LAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 479 RCKLLDWSKR--FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA 536
           RC L D       HI    A  + +LH      ++HRDLK SN+    D   K+ DFGL 
Sbjct: 155 RCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLV 211
Query: 537 RAFGGDETE----------GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIV 585
            A   DE E                VGT  YM+PE      +S K D+FS G++L E++
Sbjct: 212 TAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSKISEQGL---KELKNEIILFSKLQHRNLVKLLGC 451
           +G+G +G V++G+   E  +AVK  S   E+      EL N ++L    +H N++  +  
Sbjct: 16  VGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 452 CI---HGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH---- 503
            +   H   +L LI  +    SL    +D  +   LD      I+   A GL +LH    
Sbjct: 71  DMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 504 -QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTNRVVGTYGYMAP 560
               +  I HRDLK+ N+L+ ++    I+D GLA   +   ++ +   N  VGT  YMAP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 561 EYASDGQFSV-------KSDVFSFGILLLEIVSGKKNRGF 593
           E   D    V       + D+++FG++L E+     + G 
Sbjct: 187 EVL-DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 393 KKLGEGGFGPVYKGTLADEQEI-AVKR--LSKISEQGLKELKNEIILFSKLQHRNLVKLL 449
           +K+GEG +G V+K    +  EI A+KR  L    E        EI L  +L+H+N+V+L 
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 450 GCCIHGEEKL-LIYEFMPN---KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
              +H ++KL L++EF      K  DS   D      LD       +    +GL + H  
Sbjct: 68  DV-LHSDKKLTLVFEFCDQDLKKYFDSCNGD------LDPEIVKSFLFQLLKGLGFCHSR 120
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
           +   ++HRDLK  N+L++++   K+++FGLARAFG       +  VV T  Y  P+    
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFG 175
Query: 566 GQ-FSVKSDVFSFGILLLEIVSG 587
            + +S   D++S G +  E+ + 
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANA 198

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSKISEQGL---KELKNEIILFSKLQHRNLVKLLGC 451
           +G+G +G V++G+   E  +AVK  S   E+      EL N ++L    +H N++  +  
Sbjct: 16  VGKGRYGEVWRGSWQGEN-VAVKIFSSRDEKSWFRETELYNTVML----RHENILGFIAS 70
Query: 452 CI---HGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH---- 503
            +   H   +L LI  +    SL    +D  +   LD      I+   A GL +LH    
Sbjct: 71  DMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 504 -QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTNRVVGTYGYMAP 560
               +  I HRDLK+ N+L+ ++    I+D GLA   +   ++ +   N  VGT  YMAP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 561 EYASDGQFSV-------KSDVFSFGILLLEIVSGKKNRGF 593
           E   D    V       + D+++FG++L E+     + G 
Sbjct: 187 EVL-DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFG-GDETEGNTNRV 551
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA     G+E +     +
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----I 177
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 43/228 (18%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF----------------IFDQERCK 481
             ++H N++ LL              F P +SL+ F                I   +  K
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQ--K 121
Query: 482 LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
           L D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTD 176
Query: 542 DETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           DE  G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 177 DEMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 27/244 (11%)
Query: 374 LPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNE 433
           LPL    TIA       + + +G+G FG V++G    E E+AVK  S   E+     + E
Sbjct: 19  LPLLVQRTIAR---TIVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFR-EAE 73
Query: 434 IILFSKLQHRNLVKLLGCCIHGE----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
           I     L+H N++  +           +  L+ ++  + SL    FD      +      
Sbjct: 74  IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMI 129
Query: 490 HIICGTARGLLYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGD 542
            +   TA GL +LH +      +  I HRDLK+ N+L+ ++    I+D GLA       D
Sbjct: 130 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 189
Query: 543 ETEGNTNRVVGTYGYMAPEYASDG------QFSVKSDVFSFGILLLEIVSGKKNRGFYHS 596
             +   N  VGT  YMAPE   D       +   ++D+++ G++  EI   + + G  H 
Sbjct: 190 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHE 248
Query: 597 DNKL 600
           D +L
Sbjct: 249 DYQL 252

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 27/244 (11%)
Query: 374 LPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNE 433
           LPL    TIA       + + +G+G FG V++G    E E+AVK  S   E+     + E
Sbjct: 32  LPLLVQRTIAR---TIVLQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFR-EAE 86
Query: 434 IILFSKLQHRNLVKLLGCCIHGE----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
           I     L+H N++  +           +  L+ ++  + SL    FD      +      
Sbjct: 87  IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMI 142
Query: 490 HIICGTARGLLYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGD 542
            +   TA GL +LH +      +  I HRDLK+ N+L+ ++    I+D GLA       D
Sbjct: 143 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 202
Query: 543 ETEGNTNRVVGTYGYMAPEYASDG------QFSVKSDVFSFGILLLEIVSGKKNRGFYHS 596
             +   N  VGT  YMAPE   D       +   ++D+++ G++  EI   + + G  H 
Sbjct: 203 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHE 261
Query: 597 DNKL 600
           D +L
Sbjct: 262 DYQL 265

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS--KISEQGLKELKNEIILFSKLQH 442
           TD + + + +G+G F  V +   L    E A K ++  K+S +  ++L+ E  +   L+H
Sbjct: 3   TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+V+L           L+++ +    L   I  +E     D S   H I      +L+ 
Sbjct: 63  SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAVLHC 119
Query: 503 HQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           HQ   + ++HRDLK  N+LL    +    K++DFGLA    GD+         GT GY++
Sbjct: 120 HQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      +    D+++ G++L  ++ G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 7   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 67  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 124
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 125 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 175
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 176
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 176
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 7   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 67  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 124
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 125 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 175
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 176
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS--EQGLK-ELKNEIILFSKLQ 441
           AT  +    ++G G +G VYK            +  ++   E+GL      E+ L  +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 442 ---HRNLVKLLGCCIHGE-----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
              H N+V+L+  C         +  L++E + ++ L +++ D+     L       ++ 
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              RGL +LH +    I+HRDLK  N+L+      K++DFGLAR +     +   + VV 
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVV 173
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  Y APE      ++   D++S G +  E+   K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 490 HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 546
           H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D    
Sbjct: 192 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 248
Query: 547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                     +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 249 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 28/219 (12%)
Query: 386 TDNFSINKKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKISEQGLKELKNEIILF 437
            ++   N+ LG+G F  ++KG   +        E E+ +K L K      +       + 
Sbjct: 7   NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMM 66
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           SKL H++LV   G C+ G+E +L+ EF+   SLD+++   + C  + W  +  +    A 
Sbjct: 67  SKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAA 124
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDM-----NP---KISDFGLARAFGGDETEGNTN 549
            + +L +++   +IH ++ A N+LL ++      NP   K+SD G++      +      
Sbjct: 125 AMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI----- 176
Query: 550 RVVGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSG 587
            +     ++ PE   + +  ++ +D +SFG  L EI SG
Sbjct: 177 -LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 490 HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 546
           H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D    
Sbjct: 194 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 250
Query: 547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                     +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +SI K++G GG   V++     +Q  A+K   L +   Q L   +NEI   +KLQ     
Sbjct: 14  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---- 69
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD---WSKRFHIICGTARG----- 498
                  H ++ + +Y++   +  D +I+    C  +D   W K+   I    R      
Sbjct: 70  -------HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKN 119
Query: 499 -LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L  +H   +  I+H DLK +N L+   M  K+ DFG+A     D T    +  VGT  Y
Sbjct: 120 MLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 558 MAPEYASDGQFSVKS-----------DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA 606
           M PE   D   S ++           DV+S G +L  +  GK    F    N+++ + HA
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA 235
Query: 607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
             + +     +  D   KD   L +V++C      C+++ P+ R  +P ++
Sbjct: 236 --IIDPNHEIEFPDIPEKD---LQDVLKC------CLKRDPKQRISIPELL 275

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 490 HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 546
           H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D    
Sbjct: 199 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 255
Query: 547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                     +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 256 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 176
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 490 HIIC---GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 546
           H+IC     A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D    
Sbjct: 201 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 257
Query: 547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                     +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 258 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI  FGLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 176
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 176
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 176
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDM-NP--KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++  P  KI DFGLA    FG +        
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 176
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI D GLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 176
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 26/238 (10%)
Query: 393 KKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKL--- 448
           K LG GG G V+     D ++ +A+K++     Q +K    EI +  +L H N+VK+   
Sbjct: 17  KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 449 -----------LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
                      +G         ++ E+M     +      E+  LL+   R   +    R
Sbjct: 77  LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL----EQGPLLEEHARL-FMYQLLR 131
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGGDET-EGNTNRVVGTY 555
           GL Y+H  +   ++HRDLK +N+ ++ +D+  KI DFGLAR      + +G+ +  + T 
Sbjct: 132 GLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 556 GYMAPE-YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE 612
            Y +P    S   ++   D+++ G +  E+++GK      H   ++ LI  +  + +E
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +SI K++G GG   V++     +Q  A+K   L +   Q L   +NEI   +KLQ     
Sbjct: 58  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---- 113
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD---WSKRFHIICGTARG----- 498
                  H ++ + +Y++   +  D +I+    C  +D   W K+   I    R      
Sbjct: 114 -------HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKN 163
Query: 499 -LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L  +H   +  I+H DLK +N L+   M  K+ DFG+A     D T    +  VGT  Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 558 MAPEYASDGQFSVKS-----------DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA 606
           M PE   D   S ++           DV+S G +L  +  GK    F    N+++ + HA
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA 279
Query: 607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
             + +     +  D   KD   L +V++C      C+++ P+ R  +P ++
Sbjct: 280 --IIDPNHEIEFPDIPEKD---LQDVLKC------CLKRDPKQRISIPELL 319

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 386 TDNFSINKKLGEGGFGPVY----KGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
           +D F +  +LG G    VY    KGT   ++  A+K L K  ++  K ++ EI +  +L 
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGT---QKPYALKVLKKTVDK--KIVRTEIGVLLRLS 106
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N++KL        E  L+ E +    L   I ++      D +     I      + Y
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL---EAVAY 163
Query: 502 LHQDSRLRIIHRDLKASNVLLDQ---DMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           LH++    I+HRDLK  N+L      D   KI+DFGL++     E +     V GT GY 
Sbjct: 164 LHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYC 217
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSG 587
           APE      +  + D++S GI+   ++ G
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCG 246

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +SI K++G GG   V++     +Q  A+K   L +   Q L   +NEI   +KLQ     
Sbjct: 30  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---- 85
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD---WSKRFHIICGTARG----- 498
                  H ++ + +Y++   +  D +I+    C  +D   W K+   I    R      
Sbjct: 86  -------HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKN 135
Query: 499 -LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L  +H   +  I+H DLK +N L+   M  K+ DFG+A     D T    +  VGT  Y
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 194
Query: 558 MAPEYASDGQFSVKS-----------DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA 606
           M PE   D   S ++           DV+S G +L  +  GK    F    N+++ + HA
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA 251
Query: 607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
             + +     +  D   KD   L +V++C      C+++ P+ R  +P ++
Sbjct: 252 --IIDPNHEIEFPDIPEKD---LQDVLKC------CLKRDPKQRISIPELL 291

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +SI K++G GG   V++     +Q  A+K   L +   Q L   +NEI   +KLQ     
Sbjct: 10  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---- 65
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD---WSKRFHIICGTARG----- 498
                  H ++ + +Y++   +  D +I+    C  +D   W K+   I    R      
Sbjct: 66  -------HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKN 115
Query: 499 -LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L  +H   +  I+H DLK +N L+   M  K+ DFG+A     D T    +  VGT  Y
Sbjct: 116 MLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 558 MAPEYASDGQFSVKS-----------DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA 606
           M PE   D   S ++           DV+S G +L  +  GK    F    N+++ + HA
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA 231
Query: 607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
             + +     +  D   KD   L +V++C      C+++ P+ R  +P ++
Sbjct: 232 --IIDPNHEIEFPDIPEKD---LQDVLKC------CLKRDPKQRISIPELL 271

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI D GLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 384 NATDNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIIL 436
           N  D +   ++LG G F  V K       L    +   KR +K S +G+  ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDMNP---KISDFGLARA--FGGDETEGNTNR 550
            G+ YLH    L+I H DLK  N+ LLD+++     KI DFGLA    FG +        
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-----FKN 176
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 36/227 (15%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADE--QEIAVKRLS-KISEQG--LKELKNEIIL 436
           +  A   +    ++GEG +G V+K        + +A+KR+  +  E+G  L  ++   +L
Sbjct: 6   LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 437 --FSKLQHRNLVKLLGCCIHG----EEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
                 +H N+V+L   C       E KL L++E +          DQ+    LD     
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP 115
Query: 490 HIICGTA--------RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
            +   T         RGL +LH     R++HRDLK  N+L+      K++DFGLAR +  
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS- 171
Query: 542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
              +     VV T  Y APE      ++   D++S G +  E+   K
Sbjct: 172 --FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS--EQGLK-ELKNEIILFSKLQ 441
           AT  +    ++G G +G VYK            +  ++   E+GL      E+ L  +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 442 ---HRNLVKLLGCCIHGE-----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
              H N+V+L+  C         +  L++E + ++ L +++ D+     L       ++ 
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              RGL +LH +    I+HRDLK  N+L+      K++DFGLAR +     +     VV 
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAPVVV 173
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  Y APE      ++   D++S G +  E+   K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 387 DNFSINKKLGEGGFGPVY---KGTLADEQEI-AVKRLSKIS----EQGLKELKNEIILFS 438
           +NF + K LG G +G V+   K +  D  ++ A+K L K +     +  +  + E  +  
Sbjct: 54  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 439 KLQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
            ++    +  L      E KL LI +++    L + +  +ER           I  G   
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT----EHEVQIYVGEI- 168
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            +L L    +L II+RD+K  N+LLD + +  ++DFGL++ F  DETE   +   GT  Y
Sbjct: 169 -VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCGTIEY 226
Query: 558 MAPEYA--SDGQFSVKSDVFSFGILLLEIVSG 587
           MAP+     D       D +S G+L+ E+++G
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +SI K++G GG   V++     +Q  A+K   L +   Q L   +NEI   +KLQ     
Sbjct: 11  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---- 66
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD---WSKRFHIICGTARG----- 498
                  H ++ + +Y++   +  D +I+    C  +D   W K+   I    R      
Sbjct: 67  -------HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKN 116
Query: 499 -LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L  +H   +  I+H DLK +N L+   M  K+ DFG+A     D T    +  VGT  Y
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 558 MAPEYASDGQFSVKS-----------DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA 606
           M PE   D   S ++           DV+S G +L  +  GK    F    N+++ + HA
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA 232
Query: 607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
             + +     +  D   KD   L +V++C      C+++ P+ R  +P ++
Sbjct: 233 --IIDPNHEIEFPDIPEKD---LQDVLKC------CLKRDPKQRISIPELL 272

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +SI K++G GG   V++     +Q  A+K   L +   Q L   +NEI   +KLQ     
Sbjct: 58  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---- 113
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD---WSKRFHIICGTARG----- 498
                  H ++ + +Y++   +  D +I+    C  +D   W K+   I    R      
Sbjct: 114 -------HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKN 163
Query: 499 -LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L  +H   +  I+H DLK +N L+   M  K+ DFG+A     D T    +  VGT  Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 558 MAPEYASDGQFSVKS-----------DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA 606
           M PE   D   S ++           DV+S G +L  +  GK    F    N+++ + HA
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA 279
Query: 607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
             + +     +  D   KD   L +V++C      C+++ P+ R  +P ++
Sbjct: 280 --IIDPNHEIEFPDIPEKD---LQDVLKC------CLKRDPKQRISIPELL 319

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 36/227 (15%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADE--QEIAVKRLS-KISEQG--LKELKNEIIL 436
           +  A   +    ++GEG +G V+K        + +A+KR+  +  E+G  L  ++   +L
Sbjct: 6   LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 437 --FSKLQHRNLVKLLGCCIHG----EEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
                 +H N+V+L   C       E KL L++E +          DQ+    LD     
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP 115
Query: 490 HIICGTA--------RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
            +   T         RGL +LH     R++HRDLK  N+L+      K++DFGLAR +  
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS- 171
Query: 542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
              +     VV T  Y APE      ++   D++S G +  E+   K
Sbjct: 172 --FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERC-KLL 483
             ++H N++ LL              F P +SL+ F             + +  +C KL 
Sbjct: 76  KHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D   +F +I    RGL Y+H      IIHRDLK SN+ +++D   KI D GLAR    DE
Sbjct: 124 DDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-HTDDE 178
Query: 544 TEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
             G     V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 36/227 (15%)
Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADE--QEIAVKRLS-KISEQG--LKELKNEIIL 436
           +  A   +    ++GEG +G V+K        + +A+KR+  +  E+G  L  ++   +L
Sbjct: 6   LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 437 --FSKLQHRNLVKLLGCCIHG----EEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
                 +H N+V+L   C       E KL L++E +          DQ+    LD     
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVPEP 115
Query: 490 HIICGTA--------RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
            +   T         RGL +LH     R++HRDLK  N+L+      K++DFGLAR +  
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS- 171
Query: 542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
              +     VV T  Y APE      ++   D++S G +  E+   K
Sbjct: 172 --FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 405 KGTLADEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE 463
           K  L  +++       KIS +    + KNE+ + + +++   +   G   + +E  +IYE
Sbjct: 64  KSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYE 123
Query: 464 FMPNKSLDSF-----IFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKAS 518
           +M N S+  F     + D+     +       II        Y+H +    I HRD+K S
Sbjct: 124 YMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPS 181
Query: 519 NVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD--GQFSVKSDVFS 576
           N+L+D++   K+SDFG +      + +G+     GTY +M PE+ S+       K D++S
Sbjct: 182 NILMDKNGRVKLSDFGESEYMVDKKIKGSR----GTYEFMPPEFFSNESSYNGAKVDIWS 237
Query: 577 FGILL 581
            GI L
Sbjct: 238 LGICL 242

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGL--KELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+  +  +  K    E+ L 
Sbjct: 16  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 438 SKLQHRNLVKLLGCCIHGE------EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI 491
             ++H N++ LL             +  L+   M    L++ +  Q   KL D   +F +
Sbjct: 76  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKSQ---KLTDDHVQF-L 130
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
           I    RGL Y+H      IIHRDLK SN+ +++D   KI DFGL R    DE  G     
Sbjct: 131 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-HTDDEMTG----Y 182
Query: 552 VGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           V T  Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 388 NFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEI----ILFSKLQH 442
           +F   K +G+G FG V      A+E   AVK L K +    KE K+ +    +L   ++H
Sbjct: 39  DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LV L       ++   + +++    L  +   +ERC  L+   RF+     A  L YL
Sbjct: 99  PFLVGLHFSFQTADKLYFVLDYINGGEL-FYHLQRERC-FLEPRARFYA-AEIASALGYL 155
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L I++RDLK  N+LLD   +  ++DFGL +     E    T+   GT  Y+APE 
Sbjct: 156 HS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNSTTSTFCGTPEYLAPEV 210
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                +    D +  G +L E++ G
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYG 235

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 372 LDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQE---IAVKRLSKISEQGLK 428
           +DLP      I + +D + + K +G G FG      + D+Q    +AVK + +  E+  +
Sbjct: 10  MDLP------IMHDSDRYELVKDIGAGNFG--VARLMRDKQANELVAVKYIER-GEKIDE 60
Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
            +K EII    L+H N+V+     +      ++ E+     L   I +  R    +    
Sbjct: 61  NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFF 120
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEG 546
           F  +     G+ Y H    +++ HRDLK  N LLD    P  KI+DFG ++A        
Sbjct: 121 FQQLIS---GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA---SVLHS 171
Query: 547 NTNRVVGTYGYMAPEYASDGQFSVK-SDVFSFGILLLEIVSG 587
                VGT  Y+APE     ++  K +DV+S G+ L  ++ G
Sbjct: 172 QPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 386 TDNFSINKKLGEGGFGP----VYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
           +D + + + +G G +      V+K T     E AVK + K      +E++   IL    Q
Sbjct: 26  SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIE---ILLRYGQ 79
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N++ L      G+   L+ E M    L   I  Q+     + S   H I  T     Y
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVE---Y 136
Query: 502 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           LH      ++HRDLK SN+L +D+  NP   +I DFG A+    +   G       T  +
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN--GLLMTPCYTANF 191
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE      +    D++S GILL  +++G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 386 TDNFSINKKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKISEQGLKELKNEIILF 437
            ++   N+ LG+G F  ++KG   +        E E+ +K L K      +       + 
Sbjct: 7   NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMM 66
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           SKL H++LV   G C  G+E +L+ EF+   SLD+++   + C  + W  +  +    A 
Sbjct: 67  SKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAW 124
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDM-----NP---KISDFGLARAFGGDETEGNTN 549
            + +L +++   +IH ++ A N+LL ++      NP   K+SD G++      +      
Sbjct: 125 AMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI----- 176
Query: 550 RVVGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSG 587
            +     ++ PE   + +  ++ +D +SFG  L EI SG
Sbjct: 177 -LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 386 TDNFSINKKLGEGGFGP----VYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
           +D + + + +G G +      V+K T     E AVK + K      +E++   IL    Q
Sbjct: 26  SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIE---ILLRYGQ 79
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N++ L      G+   L+ E M    L   I  Q+     + S   H I  T     Y
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVE---Y 136
Query: 502 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           LH      ++HRDLK SN+L +D+  NP   +I DFG A+    +   G       T  +
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN--GLLMTPCYTANF 191
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE      +    D++S GILL  +++G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS--EQGLK-ELKNEIILFSKLQ 441
           AT  +    ++G G +G VYK            +  ++   E+GL      E+ L  +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 442 ---HRNLVKLLGCCIHGE-----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
              H N+V+L+  C         +  L++E + ++ L +++ D+     L       ++ 
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              RGL +LH +    I+HRDLK  N+L+      K++DFGLAR +     +     VV 
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVV 173
Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  Y APE      ++   D++S G +  E+   K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
            ARG+ +L   S  + IHRDL A N+LL ++   KI DFGLAR    +            
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS--GKKNRGFYHSDNKLNLIRHAWKLWNE 612
             +MAPE   D  +S KSDV+S+G+LL EI S  G    G    ++  + +R       E
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLR-------E 317
Query: 613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG 661
           GM  +  +      ++  E+ +   I L C  + P++RP    ++  LG
Sbjct: 318 GMRMRAPE------YSTPEIYQ---IMLDCWHRDPKERPRFAELVEKLG 357

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 384 NATDNFSINKKLGEGGFGPVYK------GTLADEQEIAVKRLSKISEQGL--KELKNEII 435
           +  D++ + ++LG G F  V K      G     + I  +RLS  S +G+  +E++ E+ 
Sbjct: 9   DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSS-SRRGVSREEIEREVN 67
Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           +  +++H N++ L     +  + +LI E +    L  F+ ++E    L   +    +   
Sbjct: 68  ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQI 124
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLARAFGGDETEGNTNRV 551
             G+ YLH     RI H DLK  N+ LLD+++ NP+I   DFG+A      E       +
Sbjct: 125 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNI 178
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 381 TIANATDNFSINKKLGEGGFGPVYK--GTLADEQEIA-VKRLSKISEQGLKELKNEIILF 437
           T    T+ + + ++LG+G F  V +    LA ++  A +    K+S +  ++L+ E  + 
Sbjct: 5   TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARIC 64
Query: 438 SKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
             L+H N+V+L           LI++ +    L   I  +E     D S   H I     
Sbjct: 65  RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILE 121
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTNR---V 551
            +L+ HQ   + ++HR+LK  N+LL   +     K++DFGLA      E EG        
Sbjct: 122 AVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-----IEVEGEQQAWFGF 173
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            GT GY++PE      +    D+++ G++L  ++ G
Sbjct: 174 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 394 KLGEGGFGPVYKGTLADE-QEIAVKR-LSKISEQGLKELK-NEIILFSKLQHRNLVKLLG 450
           K+GEG +G V+K    D  Q +A+K+ L    +  +K++   EI +  +L+H NLV LL 
Sbjct: 10  KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 451 CCIHGEEKLLIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
                    L++E+  +  L           +   K + W         T + + + H+ 
Sbjct: 70  VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHKH 121
Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YAS 564
           +    IHRD+K  N+L+ +    K+ DFG AR   G     +    V T  Y +PE    
Sbjct: 122 N---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVG 176
Query: 565 DGQFSVKSDVFSFGILLLEIVSG 587
           D Q+    DV++ G +  E++SG
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 22/213 (10%)
Query: 387 DNFSINKKLGEGGFGPVYK------GTLADEQEIAVKRLSKISEQGL--KELKNEIILFS 438
           D++ + ++LG G F  V K      G     + I  +RLS  S +G+  +E++ E+ +  
Sbjct: 5   DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSS-SRRGVSREEIEREVNILR 63
Query: 439 KLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           +++H N++ L     +  + +LI E +    L  F+ ++E     + ++    I     G
Sbjct: 64  EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---G 120
Query: 499 LLYLHQDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLARAFGGDETEGNTNRVVGT 554
           + YLH     RI H DLK  N+ LLD+++ NP+I   DFG+A      E       + GT
Sbjct: 121 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNIFGT 174
Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
             ++APE  +     +++D++S G++   ++SG
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 386 TDNFSINKKLGEGGFGP----VYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
           TD + + + +G G +      ++K T     E AVK + K      +E++   IL    Q
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKAT---NMEFAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N++ L      G+   ++ E M    L   I  Q+     + S     I  T     Y
Sbjct: 75  HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVE---Y 131
Query: 502 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           LH      ++HRDLK SN+L +D+  NP   +I DFG A+    +   G       T  +
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLMTPCYTANF 186
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE      +    D++S G+LL  +++G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTG 216

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 383 ANATDNFSINKKLGEGGFGPVY--KGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKL 440
            N    F   + LG G F  V+  K  L  +   A+K + K        L+NEI +  K+
Sbjct: 5   TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKL-FALKCIKKSPAFRDSSLENEIAVLKKI 63
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           +H N+V L           L+ + +    L   I ++      D S    +I      + 
Sbjct: 64  KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLSAVK 120
Query: 501 YLHQDSRLRIIHRDLKASNVL-LDQDMNPKI--SDFGLARAFGGDETEGNTNRVVGTYGY 557
           YLH++    I+HRDLK  N+L L  + N KI  +DFGL++     E  G  +   GT GY
Sbjct: 121 YLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGY 173
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE  +   +S   D +S G++   ++ G
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCG 203

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 30/210 (14%)
Query: 394 KLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQ------GLKELKNEIILFSKLQHRNLV 446
           K+G+G FG V+K       Q++A+K++   +E+       L+E+K    +   L+H N+V
Sbjct: 25  KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 447 KLLGCCIHGEEKL--------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
            L+  C               L+++F  +  L   + +      L   KR  ++     G
Sbjct: 81  NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 137
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGN--TNRVVGTY 555
           L Y+H++   +I+HRD+KA+NVL+ +D   K++DFGLARAF     ++ N   NRVV T 
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 193
Query: 556 GYMAPE-YASDGQFSVKSDVFSFGILLLEI 584
            Y  PE    +  +    D++  G ++ E+
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEM 223

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS--KISEQGLKELKNEIILFSKLQHRNL 445
           + + ++LG+G F  V +   +   QE A K ++  K+S +  ++L+ E  +   L+H N+
Sbjct: 24  YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V+L           LI++ +    L   I  +E     D S   H I      +L+ HQ 
Sbjct: 84  VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS---HCIQQILEAVLHCHQ- 139
Query: 506 SRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAFGGDETEGNTNR---VVGTYGYMA 559
             + ++HRDLK  N+LL   +     K++DFGLA      E EG         GT GY++
Sbjct: 140 --MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-----IEVEGEQQAWFGFAGTPGYLS 192
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      +    D+++ G++L  ++ G
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVG 220

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 106/262 (40%), Gaps = 37/262 (14%)
Query: 360 GTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRL 419
           G + K E    DL      +A +      +++ + +  G +G V  G  ++   +A+KR+
Sbjct: 1   GMQAKGEAAMRDL------IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRV 54
Query: 420 SKISEQG-----------LKELKNEIILFSKLQHRNLVKLLGCCIHGEE----KLLIYEF 464
                 G            K +  EI L +   H N++ L    +H EE    KL +   
Sbjct: 55  FNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE 114
Query: 465 MPNKSLDSFIFDQERCKLLDWSKRF--HIICGTARGLLYLHQDSRLRIIHRDLKASNVLL 522
           +    L   I DQ         + F  HI+ G       LH      ++HRDL   N+LL
Sbjct: 115 LMRTDLAQVIHDQRIVISPQHIQYFMYHILLG-------LHVLHEAGVVHRDLHPGNILL 167
Query: 523 DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ-FSVKSDVFSFGILL 581
             + +  I DF LAR    D  + N    V    Y APE     + F+   D++S G ++
Sbjct: 168 ADNNDITICDFNLARE---DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM 224
Query: 582 LEIVSGK---KNRGFYHSDNKL 600
            E+ + K   +   FY+  NK+
Sbjct: 225 AEMFNRKALFRGSTFYNQLNKI 246

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 393 KKLGEGGFGPVYKGTLADE-QEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLL 449
           + +G G +G V          ++A+K+L +   SE   K    E+ L   ++H N++ LL
Sbjct: 31  QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 450 GCCIHGEEKLLIYEFMPNKSLDSF--------IFDQERCKLLDWSK----RFH-IICGTA 496
                         F P+++LD F            +  KL+   K    R   ++    
Sbjct: 91  DV------------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML 138
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           +GL Y+H      IIHRDLK  N+ +++D   KI DFGLAR     + +      V T  
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRW 190
Query: 557 YMAPEYASD-GQFSVKSDVFSFGILLLEIVSGK 588
           Y APE   +  +++   D++S G ++ E+++GK
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 29/186 (15%)
Query: 394 KLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQ------GLKELKNEIILFSKLQHRNLV 446
           K+G+G FG V+K       Q++A+K++   +E+       L+E+K    +   L+H N+V
Sbjct: 24  KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 79
Query: 447 KLLGCCIHGEEKL--------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
            L+  C               L+++F  +  L   + +      L   KR  ++     G
Sbjct: 80  NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 136
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGN--TNRVVGTY 555
           L Y+H++   +I+HRD+KA+NVL+ +D   K++DFGLARAF     ++ N   NRVV T 
Sbjct: 137 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 192
Query: 556 GYMAPE 561
            Y  PE
Sbjct: 193 WYRPPE 198

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 126/291 (43%), Gaps = 51/291 (17%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +SI K++G GG   V++     +Q  A+K   L +   Q L   +NEI   +KLQ     
Sbjct: 58  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---- 113
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD---WSKRFHIICGTARG----- 498
                  H ++ + +Y++   +  D +I+    C  +D   W K+   I    R      
Sbjct: 114 -------HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKN 163
Query: 499 -LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L  +H   +  I+H DLK +N L+   M  K+ DFG+A     D T    +  VG   Y
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222
Query: 558 MAPEYASDGQFSVKS-----------DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA 606
           M PE   D   S ++           DV+S G +L  +  GK    F    N+++ + HA
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA 279
Query: 607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
             + +     +  D   KD   L +V++C      C+++ P+ R  +P ++
Sbjct: 280 --IIDPNHEIEFPDIPEKD---LQDVLKC------CLKRDPKQRISIPELL 319

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 45/275 (16%)
Query: 325 ALLAVVIAAGYLIHKSRRNIVVNIARYFRENRNNRGTEQKNEDQNIDLDLPLFELATIAN 384
            L ++V+   +   +  +NI   + RY +  +  RG + K ED                 
Sbjct: 34  GLNSLVLDLDFPALRKNKNIDNFLNRYEKIVKKIRGLQMKAED----------------- 76
Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKI-----SEQGLKELKNEIILFS 438
               + + K +G G FG V        Q++ A+K LSK      S+      + +I+ F+
Sbjct: 77  ----YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 132
Query: 439 KLQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
              +   V  L C    ++ L ++ E+MP   L + + + +  +   W+K +     TA 
Sbjct: 133 ---NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE--KWAKFY-----TAE 182
Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET-EGNTNRVVGTYG 556
            +L L     + +IHRD+K  N+LLD+  + K++DFG       DET   + +  VGT  
Sbjct: 183 VVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVGTPD 240
Query: 557 YMAPEY----ASDGQFSVKSDVFSFGILLLEIVSG 587
           Y++PE       DG +  + D +S G+ L E++ G
Sbjct: 241 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 126/291 (43%), Gaps = 51/291 (17%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +SI K++G GG   V++     +Q  A+K   L +   Q L   +NEI   +KLQ     
Sbjct: 30  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---- 85
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLD---WSKRFHIICGTARG----- 498
                  H ++ + +Y++   +  D +I+    C  +D   W K+   I    R      
Sbjct: 86  -------HSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKN 135
Query: 499 -LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L  +H   +  I+H DLK +N L+   M  K+ DFG+A     D      +  VGT  Y
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNY 194
Query: 558 MAPEYASDGQFSVKS-----------DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA 606
           M PE   D   S ++           DV+S G +L  +  GK    F    N+++ + HA
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKL-HA 251
Query: 607 WKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
             + +     +  D   KD   L +V++C      C+++ P+ R  +P ++
Sbjct: 252 --IIDPNHEIEFPDIPEKD---LQDVLKC------CLKRDPKQRISIPELL 291

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 30/210 (14%)
Query: 394 KLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQ------GLKELKNEIILFSKLQHRNLV 446
           K+G+G FG V+K       Q++A+K++   +E+       L+E+K    +   L+H N+V
Sbjct: 25  KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 447 KLLGCCIHGEEKL--------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
            L+  C               L+++F  +  L   + +      L   KR  ++     G
Sbjct: 81  NLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 137
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGN--TNRVVGTY 555
           L Y+H++   +I+HRD+KA+NVL+ +D   K++DFGLARAF     ++ N   NRVV T 
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 193
Query: 556 GYMAPE-YASDGQFSVKSDVFSFGILLLEI 584
            Y  PE    +  +    D++  G ++ E+
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEM 223

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG-----------LKELKNEIILF 437
           +++ + +  G +G V  G  ++   +A+KR+      G            K +  EI L 
Sbjct: 24  YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 438 SKLQHRNLVKLLGCCIHGEE----KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF--HI 491
           +   H N++ L    +H EE    KL +   +    L   I DQ         + F  HI
Sbjct: 84  NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHI 143
Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
           + G       LH      ++HRDL   N+LL  + +  I DF LAR    D  + N    
Sbjct: 144 LLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE---DTADANKTHY 193
Query: 552 VGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGK---KNRGFYHSDNKL 600
           V    Y APE     + F+   D++S G ++ E+ + K   +   FY+  NK+
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 30/210 (14%)
Query: 394 KLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQ------GLKELKNEIILFSKLQHRNLV 446
           K+G+G FG V+K       Q++A+K++   +E+       L+E+K    +   L+H N+V
Sbjct: 25  KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 447 KLLGCCIHGEEKL--------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
            L+  C               L+++F  +  L   + +      L   KR  ++     G
Sbjct: 81  NLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLNG 137
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGN--TNRVVGTY 555
           L Y+H++   +I+HRD+KA+NVL+ +D   K++DFGLARAF     ++ N   NRVV T 
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 193
Query: 556 GYMAPE-YASDGQFSVKSDVFSFGILLLEI 584
            Y  PE    +  +    D++  G ++ E+
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEM 223

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 372 LDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQE---IAVKRLSKISEQGLK 428
           +DLP      I + +D + + K +G G FG      + D+Q    +AVK + +  E+   
Sbjct: 10  MDLP------IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIAA 60
Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
            +K EII    L+H N+V+     +      ++ E+     L   I +  R    +   R
Sbjct: 61  NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEAR 118
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEG 546
           F        G+ Y H    +++ HRDLK  N LLD    P  KI DFG +++        
Sbjct: 119 F-FFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHS 171
Query: 547 NTNRVVGTYGYMAPEYASDGQFSVK-SDVFSFGILLLEIVSG 587
                VGT  Y+APE     ++  K +DV+S G+ L  ++ G
Sbjct: 172 QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LKE++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E+ P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+++DQ    K++DFGLA+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 389 FSINKKLGEGGFGPVY---KGTLADEQEI-AVKRLSKI----SEQGLKELKNEIILFSKL 440
           F + + LG+GG+G V+   K T A+  +I A+K L K     + +     K E  +  ++
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           +H  +V L+     G +  LI E++    L       ER  +         +   +  L 
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALG 135
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           +LHQ     II+RDLK  N++L+   + K++DFGL +    D T   T+   GT  YMAP
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEYMAP 190
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSG 587
           E       +   D +S G L+ ++++G
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTG 217

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 389 FSINKKLGEGGFGPVY---KGTLADEQEI-AVKRLSKI----SEQGLKELKNEIILFSKL 440
           F + + LG+GG+G V+   K T A+  +I A+K L K     + +     K E  +  ++
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
           +H  +V L+     G +  LI E++    L       ER  +         +   +  L 
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALG 135
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           +LHQ     II+RDLK  N++L+   + K++DFGL +    D T   T+   GT  YMAP
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAP 190
Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSG 587
           E       +   D +S G L+ ++++G
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTG 217

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 391 INKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           + + +G+G FG V++G    E E+AVK  S   E+     + EI     L+H N++  + 
Sbjct: 8   LQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 65
Query: 451 CCIHGE----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD- 505
                     +  L+ ++  + SL    FD      +       +   TA GL +LH + 
Sbjct: 66  ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 506 ----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTNRVVGTYGYMA 559
                +  I HRDLK+ N+L+ ++    I+D GLA       D  +   N  VGT  YMA
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 560 PEYASDG------QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
           PE   D       +   ++D+++ G++  EI + + + G  H D +L
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEI-ARRCSIGGIHEDYQL 227

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 388 NFSINKKLGEGGFGPVY----KGTLADEQEIAVKRLSK---ISEQGLKELKNEIILFSKL 440
           +F+    LG+G FG V     KGT   E+  A+K L K   I +  ++    E  + + L
Sbjct: 20  DFNFLMVLGKGSFGKVMLADRKGT---EELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 441 QHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
                +  L  C    ++L  + E++    L   I  Q+  K  +    F+     + GL
Sbjct: 77  DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYA-AEISIGL 133
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            +LH+     II+RDLK  NV+LD + + KI+DFG+ +    D     T    GT  Y+A
Sbjct: 134 FFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGTPDYIA 188
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE  +   +    D +++G+LL E+++G+
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 391 INKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           + + +G+G FG V++G    E E+AVK  S   E+     + EI     L+H N++  + 
Sbjct: 7   LQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 64
Query: 451 CCIHGE----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD- 505
                     +  L+ ++  + SL    FD      +       +   TA GL +LH + 
Sbjct: 65  ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 506 ----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTNRVVGTYGYMA 559
                +  I HRDLK+ N+L+ ++    I+D GLA       D  +   N  VGT  YMA
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 560 PEYASDG------QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
           PE   D       +   ++D+++ G++  EI + + + G  H D +L
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEI-ARRCSIGGIHEDYQL 226

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K +G G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E+MP   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    K++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 380 ATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS----EQGLKELKNEII 435
           A+ +    +F + + +G G +  V    L     I   R+ K      ++ +  ++ E  
Sbjct: 45  ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
           +F +  +   +  L  C   E +L  + E++    L      Q + KL +   RF+    
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYS-AE 161
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
            +  L YLH+     II+RDLK  NVLLD + + K++D+G+ +   G      T+   GT
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSTFCGT 216
Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y+APE      +    D ++ G+L+ E+++G+
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K +G G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E+MP   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    K++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 391 INKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           + + +G+G FG V++G    E E+AVK  S   E+     + EI     L+H N++  + 
Sbjct: 13  LQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 70
Query: 451 CCIHGE----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD- 505
                     +  L+ ++  + SL    FD      +       +   TA GL +LH + 
Sbjct: 71  ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 506 ----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTNRVVGTYGYMA 559
                +  I HRDLK+ N+L+ ++    I+D GLA       D  +   N  VGT  YMA
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 560 PEYASDG------QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
           PE   D       +   ++D+++ G++  EI   + + G  H D +L
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQL 232

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 27/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + F   K LG+G FG V          I VK  +      +K LK E+I+        L 
Sbjct: 148 NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 257
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH  S   +++RDLK  N++LD+D + KI+DFGL +   G +         GT 
Sbjct: 258 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKTFCGTP 313
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 355

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 391 INKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLG 450
           + + +G+G FG V++G    E E+AVK  S   E+     + EI     L+H N++  + 
Sbjct: 10  LQESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIA 67
Query: 451 CCIHGE----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD- 505
                     +  L+ ++  + SL    FD      +       +   TA GL +LH + 
Sbjct: 68  ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 506 ----SRLRIIHRDLKASNVLLDQDMNPKISDFGLA--RAFGGDETEGNTNRVVGTYGYMA 559
                +  I HRDLK+ N+L+ ++    I+D GLA       D  +   N  VGT  YMA
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 560 PEYASDG------QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
           PE   D       +   ++D+++ G++  EI   + + G  H D +L
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQL 229

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 27/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + F   K LG+G FG V          I VK  +      +K LK E+I+        L 
Sbjct: 151 NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 201 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 260
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH  S   +++RDLK  N++LD+D + KI+DFGL +   G +         GT 
Sbjct: 261 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKTFCGTP 316
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 358

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS--KISEQGLKELKNEIILFSKLQH 442
           TD + + ++LG+G F  V +   +   QE A K ++  K+S +  ++L+ E  +   L+H
Sbjct: 3   TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+V+L           L+++ +    L   I  +E     D S   H I      + + 
Sbjct: 63  PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVNHC 119
Query: 503 HQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           H +    I+HRDLK  N+LL    +    K++DFGLA    GD+         GT GY++
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      +    D+++ G++L  ++ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 22/218 (10%)
Query: 385 ATDNFSINKKLGEGGFGPVYK------GTLADEQEIAVKRLSKISEQGLKELKNEIILFS 438
           AT  +    ++G G +G VYK      G     + + V                E+ L  
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 439 KLQ---HRNLVKLLGCCIHGE-----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFH 490
           +L+   H N+V+L+  C         +  L++E + ++ L +++ D+     L       
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           ++    RGL +LH +    I+HRDLK  N+L+      K++DFGLAR +     +     
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALTP 178
Query: 551 VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           VV T  Y APE      ++   D++S G +  E+   K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 387 DNFSINKKLGEGGFGPV----YKGTLADEQEIAVKRLSK----ISEQGL--KELKNEIIL 436
           D++ + ++LG G F  V     KGT    +E A K + K     S +G+  +E++ E+ +
Sbjct: 26  DHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             +++H N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 83  LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD-- 140
Query: 497 RGLLYLHQDSRLRIIHRDLKASNV-LLDQDM-NPKIS--DFGLARAFGGDETEGNTNRVV 552
            G+ YLH     RI H DLK  N+ LLD+++ NP+I   DFG+A      E       + 
Sbjct: 141 -GVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---EAGNEFKNIF 193
Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           GT  ++APE  +     +++D++S G++   ++SG
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 96/232 (41%), Gaps = 28/232 (12%)
Query: 380 ATIANATDN-FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFS 438
             +A  T N F   K LG+G FG V          I VK  +      +K LK E+I+  
Sbjct: 1   GAMARVTMNEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAK 50
Query: 439 KLQHRNLV--KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSK 487
                 L   ++L    H     L Y F  +  L             F   R ++    +
Sbjct: 51  DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR 110
Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 547
                      L YLH  S   +++RDLK  N++LD+D + KI+DFGL +   G +    
Sbjct: 111 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGAT 166
Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
                GT  Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 167 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 216

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS--KISEQGLKELKNEIILFSKLQH 442
           TD + + ++LG+G F  V +   +   QE A K ++  K+S +  ++L+ E  +   L+H
Sbjct: 3   TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+V+L           L+++ +    L   I  +E     D S   H I      + + 
Sbjct: 63  PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS---HCIQQILESVNHC 119
Query: 503 HQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           H +    I+HRDLK  N+LL    +    K++DFGLA    GD+         GT GY++
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      +    D+++ G++L  ++ G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 27/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + F   K LG+G FG V          I VK  +      +K LK E+I+        L 
Sbjct: 10  NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 59
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 60  ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 119
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH  S   +++RDLK  N++LD+D + KI+DFGL +   G +         GT 
Sbjct: 120 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKXFCGTP 175
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 217

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 34  DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++P   + S +  +   +  +   RF+         
Sbjct: 91  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTF 147
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 148 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 199
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LKE++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E+ P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+++DQ    +++DFGLA+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 27/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + F   K LG+G FG V          I VK  +      +K LK E+I+        L 
Sbjct: 8   NEFEYLKLLGKGTFGKV----------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 57
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 58  ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 117
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH  S   +++RDLK  N++LD+D + KI+DFGL +   G +         GT 
Sbjct: 118 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE--GIKDGATMKXFCGTP 173
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 215

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 395 LGEGGFGPVYKGTLADEQEIAVKRLSKIS-------EQGLKELKNEIILFSKLQHRNLVK 447
           LGEG +G V +  + D + +  + +  +          G   +K EI L  +L+H+N+++
Sbjct: 13  LGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 448 LLGCCIHGEEKLLIYEFMP------NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           L+   ++ EEK  +Y  M        + LDS    ++R  +      F   C    GL Y
Sbjct: 71  LVDV-LYNEEKQKMYMVMEYCVCGMQEMLDSV--PEKRFPVCQAHGYF---CQLIDGLEY 124
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           LH      I+H+D+K  N+LL      KIS  G+A A      +       G+  +  PE
Sbjct: 125 LHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 562 YAS--DGQFSVKSDVFSFGILLLEIVSG 587
            A+  D     K D++S G+ L  I +G
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTG 209

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 380 ATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS----EQGLKELKNEII 435
           A+ +    +F + + +G G +  V    L     I   ++ K      ++ +  ++ E  
Sbjct: 13  ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
           +F +  +   +  L  C   E +L  + E++    L      Q + KL +   RF+    
Sbjct: 73  VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYS-AE 129
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
            +  L YLH+     II+RDLK  NVLLD + + K++D+G+ +   G      T+   GT
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGT 184
Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y+APE      +    D ++ G+L+ E+++G+
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++P   + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++P   + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++P   + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS----EQGLKELKNEIILFSKLQHR 443
           +F + + +G G +  V    L     I   ++ K      ++ +  ++ E  +F +  + 
Sbjct: 10  DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 444 NLVKLLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +  L  C   E +L  + E++    L      Q + KL +   RF+     +  L YL
Sbjct: 70  PFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYS-AEISLALNYL 126
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H+     II+RDLK  NVLLD + + K++D+G+ +   G      T+   GT  Y+APE 
Sbjct: 127 HERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEI 181
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +    D ++ G+L+ E+++G+
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGR 207

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS----EQGLKELKNEIILFSKLQHR 443
           +F + + +G G +  V    L     I   ++ K      ++ +  ++ E  +F +  + 
Sbjct: 6   DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 444 NLVKLLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +  L  C   E +L  + E++    L      Q + KL +   RF+     +  L YL
Sbjct: 66  PFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYS-AEISLALNYL 122
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H+     II+RDLK  NVLLD + + K++D+G+ +   G      T+   GT  Y+APE 
Sbjct: 123 HERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEI 177
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +    D ++ G+L+ E+++G+
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGR 203

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 373 DLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQE---IAVKRLSKISEQGLKE 429
           DLP      I + +D + + K +G G FG      + D+Q    +AVK + +  E+  + 
Sbjct: 10  DLP------IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIDEN 60
Query: 430 LKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
           +K EII    L+H N+V+     +      ++ E+     L   I +  R    +   RF
Sbjct: 61  VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARF 118
Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGN 547
                   G+ Y H    +++ HRDLK  N LLD    P  KI DFG +++         
Sbjct: 119 -FFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQ 171
Query: 548 TNRVVGTYGYMAPEYASDGQFSVK-SDVFSFGILLLEIVSG 587
               VGT  Y+APE     ++  K +DV+S G+ L  ++ G
Sbjct: 172 PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 34  DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++P   + S +  +   +  +   RF+         
Sbjct: 91  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 147
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 148 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 199
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 42  DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++P   + S +  +   +  +   RF+         
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 155
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E+ P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+++DQ    K++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 42  DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++P   + S +  +   +  +   RF+         
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 155
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 36/244 (14%)
Query: 362 EQKNEDQNIDLDLPLFELATIANATDN--FSINKKLGEGGFGPVYKGTLADEQEIAV--- 416
           E++N+ Q+   D+   E   +  + D      + ++G G F  VYKG L  E  + V   
Sbjct: 2   EERNQQQD---DIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKG-LDTETTVEVAWC 57
Query: 417 ----KRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGC---CIHGEE-KLLIYEFMPNK 468
               ++L+K   Q  KE   E      LQH N+V+        + G++  +L+ E   + 
Sbjct: 58  ELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSG 114
Query: 469 SLDSFI--FDQERCKLL-DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD 525
           +L +++  F   + K+L  W ++        +GL +LH  +   IIHRDLK  N+ +   
Sbjct: 115 TLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHTRTP-PIIHRDLKCDNIFITGP 167
Query: 526 MNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEI 584
               KI D GLA      +       V+GT  + APE   + ++    DV++FG   LE 
Sbjct: 168 TGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEX 222
Query: 585 VSGK 588
            + +
Sbjct: 223 ATSE 226

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 42  DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++P   + S +  +   +  +   RF+         
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 155
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++P   + S +  +   +  +   RF+          YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTFEYL 158
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 42  DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E+ P   + S +  +   +  +   RF+         
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 155
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+++DQ    K++DFG A+       +G T  + GT  Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 62  DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++P   + S +  +   +  +   RF+         
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 175
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 176 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 227
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K +G G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    K++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 37/243 (15%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGL--KELKNEIILFSKLQHR 443
           D + I   +G G +G V +     E+ + A+K++ ++ E  +  K +  EI + ++L H 
Sbjct: 53  DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI---ICGTARGLL 500
           ++VK+L   I  + +     ++  +  DS      R  +  +    HI   +     G+ 
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVK 170
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET----------EGNTNR 550
           Y+H      I+HRDLK +N L++QD + K+ DFGLAR     E           E + N 
Sbjct: 171 YVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 551 V---------------VGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGKKNRGFY 594
           V               V T  Y APE       ++   DV+S G +  E+++  K    Y
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287
Query: 595 HSD 597
           H+D
Sbjct: 288 HAD 290

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 386 TDNFSINKKLGEGGFGP----VYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
           TD + + + +G G +      ++K T     E AVK + K      +E++   IL    Q
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKAT---NXEFAVKIIDKSKRDPTEEIE---ILLRYGQ 74
Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N++ L      G+   ++ E      L   I  Q   K     +   ++    + + Y
Sbjct: 75  HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ---KFFSEREASAVLFTITKTVEY 131
Query: 502 LHQDSRLRIIHRDLKASNVL-LDQDMNP---KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           LH      ++HRDLK SN+L +D+  NP   +I DFG A+    +   G       T  +
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLXTPCYTANF 186
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           +APE      +    D++S G+LL   ++G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTG 216

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 415 AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI 474
           + + + ++ E  LKE+    IL     H N+++L           L+++ M    L  F 
Sbjct: 46  SAEEVQELREATLKEVD---ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FD 100
Query: 475 FDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 534
           +  E+  L +   R  I+      +  LH   +L I+HRDLK  N+LLD DMN K++DFG
Sbjct: 101 YLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 156
Query: 535 LARAFGGDETEGNTNRVVGTYGYMAPEY----ASDGQ--FSVKSDVFSFGILLLEIVSGK 588
            +      E       V GT  Y+APE      +D    +  + D++S G+++  +++G 
Sbjct: 157 FSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG- 212
Query: 589 KNRGFYHSDNKLNL 602
            +  F+H    L L
Sbjct: 213 -SPPFWHRKQMLML 225

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 27  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++P   + S +  +   +  +   RF+          YL
Sbjct: 87  PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 143
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 144 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEI 195
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAG 220

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLK-ELKNEIILFSKLQHRNL 445
           D + I ++LG G FG V++        + V +         K  +KNEI + ++L H  L
Sbjct: 51  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFI----FDQERCKLLDWSKRFHIICGTARGLLY 501
           + L        E +LI EF+    L   I    +     +++++ ++         GL +
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ------ACEGLKH 164
Query: 502 LHQDSRLRIIHRDLKASNVLLD--QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
           +H+ S   I+H D+K  N++ +  +  + KI DFGLA     DE    T     T  + A
Sbjct: 165 MHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT---TATAEFAA 218
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE          +D+++ G+L   ++SG
Sbjct: 219 PEIVDREPVGFYTDMWAIGVLGYVLLSG 246

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 386 TDNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRL-SKISEQGLKELKNEI-ILFSKLQH 442
            D+     +LG G +G V K   +   Q +AVKR+ + ++ Q  K L  ++ I    +  
Sbjct: 6   ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF---IFDQERCKLLDWSKRFHIICGTARGL 499
              V   G      +  +  E M + SLD F   + D+ +    D   +  I     + L
Sbjct: 66  PFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKAL 122
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            +LH  S+L +IHRD+K SNVL++     K+ DFG++  +  D+   + +   G   YMA
Sbjct: 123 EHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVDDVAKDID--AGCKPYMA 177
Query: 560 PEYA----SDGQFSVKSDVFSFGILLLEI 584
           PE      +   +SVKSD++S GI ++E+
Sbjct: 178 PERINPELNQKGYSVKSDIWSLGITMIEL 206

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++P   + S +  +   +  +   RF+          YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 158
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E+ P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+++DQ    K++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++P   + S +  +   +  +   RF+          YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 158
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEI 210
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 415 AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI 474
           + + + ++ E  LKE+    IL     H N+++L           L+++ M    L  F 
Sbjct: 59  SAEEVQELREATLKEVD---ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FD 113
Query: 475 FDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 534
           +  E+  L +   R  I+      +  LH   +L I+HRDLK  N+LLD DMN K++DFG
Sbjct: 114 YLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169
Query: 535 LARAFGGDETEGNTNRVVGTYGYMAPEY----ASDGQ--FSVKSDVFSFGILLLEIVSGK 588
            +      E       V GT  Y+APE      +D    +  + D++S G+++  +++G 
Sbjct: 170 FSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG- 225
Query: 589 KNRGFYHSDNKLNL 602
            +  F+H    L L
Sbjct: 226 -SPPFWHRKQMLML 238

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI------SEQGLKELKNEIILFSK 439
           D + I + +G G +G V         Q++A+K++         +++ L+ELK    +   
Sbjct: 55  DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK----ILKH 110
Query: 440 LQHRNLVK----LLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
            +H N++     L     +GE K   ++ + M    L   I   +   L       + + 
Sbjct: 111 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTL---EHVRYFLY 166
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN--TNRV 551
              RGL Y+H     ++IHRDLK SN+L++++   KI DFG+AR       E        
Sbjct: 167 QLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 223
Query: 552 VGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGKK 589
           V T  Y APE   S  +++   D++S G +  E+++ ++
Sbjct: 224 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 25/222 (11%)
Query: 380 ATIANATDNFSINK-------KLGEGGFGPVYK-GTLADEQEIAVKRL-SKISEQGLKEL 430
           A I+    NF +         +LG G +G V K   +   Q +AVKR+ + ++ Q  K L
Sbjct: 37  ACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL 96
Query: 431 KNEI-ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF---IFDQERCKLLDWS 486
             ++ I    +     V   G      +  +  E M + SLD F   + D+ +    D  
Sbjct: 97  LMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDIL 155
Query: 487 KRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 546
            +  I     + L +LH  S+L +IHRD+K SNVL++     K+ DFG++  +  D    
Sbjct: 156 GK--IAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVDSVAK 210
Query: 547 NTNRVVGTYGYMAPEYA----SDGQFSVKSDVFSFGILLLEI 584
             +   G   YMAPE      +   +SVKSD++S GI ++E+
Sbjct: 211 TID--AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG+GGFG V+ G  L D  ++A+K + +    G   L +      E+ L  K+
Sbjct: 32  EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 441 Q----HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
                H  +++LL      E  +L+ E  P  + D F +  E+  L +   R    C   
Sbjct: 92  GAGGGHPGVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPLGEGPSR----CFFG 146
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMN-PKISDFGLARAFGGDETEGNTNRVVGTY 555
           + +  +       ++HRD+K  N+L+D      K+ DFG + A   DE   + +   GT 
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFD---GTR 202
Query: 556 GYMAPEYASDGQF-SVKSDVFSFGILLLEIVSG 587
            Y  PE+ S  Q+ ++ + V+S GILL ++V G
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 387 DNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIILFSK 439
           D + I ++LG G F  V K       L    +   KR S+ S +G+  +E++ E+ +  +
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           + H N++ L     +  + +LI E +    L  F+  +E    L   +    I     G+
Sbjct: 72  VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGV 128
Query: 500 LYLHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTNRVVGTY 555
            YLH     +I H DLK  N+ LLD+++   + K+ DFGLA      E       + GT 
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTP 182
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            ++APE  +     +++D++S G++   ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 387 DNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIILFSK 439
           D + I ++LG G F  V K       L    +   KR S+ S +G+  +E++ E+ +  +
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           + H N++ L     +  + +LI E +    L  F+  +E    L   +    I     G+
Sbjct: 72  VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGV 128
Query: 500 LYLHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTNRVVGTY 555
            YLH     +I H DLK  N+ LLD+++   + K+ DFGLA      E       + GT 
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTP 182
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            ++APE  +     +++D++S G++   ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 415 AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI 474
           + + + ++ E  LKE+    IL     H N+++L           L+++ M    L  F 
Sbjct: 59  SAEEVQELREATLKEVD---ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL--FD 113
Query: 475 FDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG 534
           +  E+  L +   R  I+      +  LH   +L I+HRDLK  N+LLD DMN K++DFG
Sbjct: 114 YLTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169
Query: 535 LARAFGGDETEGNTNRVVGTYGYMAPEY----ASDGQ--FSVKSDVFSFGILLLEIVSGK 588
            +      E       V GT  Y+APE      +D    +  + D++S G+++  +++G 
Sbjct: 170 FSCQLDPGE---KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG- 225
Query: 589 KNRGFYHSDNKLNL 602
            +  F+H    L L
Sbjct: 226 -SPPFWHRKQMLML 238

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           +     + L YL +  +  +IHRD+K SN+LLD+    K+ DFG++     D+ +   +R
Sbjct: 129 MTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DR 183
Query: 551 VVGTYGYMAPEY-----ASDGQFSVKSDVFSFGILLLEIVSGK 588
             G   YMAPE       +   + +++DV+S GI L+E+ +G+
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 387 DNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIILFSK 439
           D + I ++LG G F  V K       L    +   KR S+ S +G+  +E++ E+ +  +
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           + H N++ L     +  + +LI E +    L  F+  +E    L   +    I     G+
Sbjct: 72  VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGV 128
Query: 500 LYLHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTNRVVGTY 555
            YLH     +I H DLK  N+ LLD+++   + K+ DFGLA      E       + GT 
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTP 182
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            ++APE  +     +++D++S G++   ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADE-QEIAVKRLSK---ISEQGL--KELKNEIILFSKL 440
           D + + + +G+G F  V +    +  Q+ AVK +      S  GL  ++LK E  +   L
Sbjct: 24  DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF--HIICGTARG 498
           +H ++V+LL          +++EFM    L   I  +     + +S+    H +      
Sbjct: 84  KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSEAVASHYMRQILEA 142
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP---KISDFGLARAFGGDETEGNTNRVVGTY 555
           L Y H ++   IIHRD+K  NVLL    N    K+ DFG+A   G  E+       VGT 
Sbjct: 143 LRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTP 197
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            +MAPE      +    DV+  G++L  ++SG
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 387 DNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIILFSK 439
           D + I ++LG G F  V K       L    +   KR S+ S +G+  +E++ E+ +  +
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           + H N++ L     +  + +LI E +    L  F+  +E    L   +    I     G+
Sbjct: 72  VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGV 128
Query: 500 LYLHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTNRVVGTY 555
            YLH     +I H DLK  N+ LLD+++   + K+ DFGLA      E       + GT 
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTP 182
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            ++APE  +     +++D++S G++   ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 387 DNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIILFSK 439
           D + I ++LG G F  V K       L    +   KR S+ S +G+  +E++ E+ +  +
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           + H N++ L     +  + +LI E +    L  F+  +E    L   +    I     G+
Sbjct: 72  VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGV 128
Query: 500 LYLHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTNRVVGTY 555
            YLH     +I H DLK  N+ LLD+++   + K+ DFGLA      E       + GT 
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTP 182
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            ++APE  +     +++D++S G++   ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 387 DNFSINKKLGEGGFGPVYK-----GTLADEQEIAVKRLSKISEQGL--KELKNEIILFSK 439
           D + I ++LG G F  V K       L    +   KR S+ S +G+  +E++ E+ +  +
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           + H N++ L     +  + +LI E +    L  F+  +E    L   +    I     G+
Sbjct: 72  VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGV 128
Query: 500 LYLHQDSRLRIIHRDLKASNV-LLDQDM---NPKISDFGLARAFGGDETEGNTNRVVGTY 555
            YLH     +I H DLK  N+ LLD+++   + K+ DFGLA      E       + GT 
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKNIFGTP 182
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            ++APE  +     +++D++S G++   ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             L KL           ++ E+ P   + S +  +   +  +   RF+          YL
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTFEYL 158
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+++DQ    K++DFG A+       +G T  + GT  Y+APE 
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 372 LDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQE---IAVKRLSKISEQGLK 428
           +DLP      I + +D + + K +G G FG      + D+Q    +AVK + +  E+  +
Sbjct: 10  MDLP------IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIDE 60
Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
            +K EII    L+H N+V+     +      ++ E+     L   I +  R    +   R
Sbjct: 61  NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEAR 118
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEG 546
           F        G+ Y H    +++ HRDLK  N LLD    P  KI  FG +++        
Sbjct: 119 F-FFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKS---SVLHS 171
Query: 547 NTNRVVGTYGYMAPEYASDGQFSVK-SDVFSFGILLLEIVSG 587
                VGT  Y+APE     ++  K +DV+S G+ L  ++ G
Sbjct: 172 QPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI------SEQGLKELKNEIILFSK 439
           D + I + +G G +G V         Q++A+K++         +++ L+ELK    +   
Sbjct: 54  DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK----ILKH 109
Query: 440 LQHRNLVK----LLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIIC 493
            +H N++     L     +GE K   ++ + M    L   I   +   L       + + 
Sbjct: 110 FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTL---EHVRYFLY 165
Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN--TNRV 551
              RGL Y+H     ++IHRDLK SN+L++++   KI DFG+AR       E        
Sbjct: 166 QLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 222
Query: 552 VGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGKK 589
           V T  Y APE   S  +++   D++S G +  E+++ ++
Sbjct: 223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 372 LDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQE---IAVKRLSKISEQGLK 428
           +DLP      I + +D + + K +G G FG      + D+Q    +AVK + +  E+  +
Sbjct: 10  MDLP------IMHDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER-GEKIDE 60
Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
            +K EII    L+H N+V+     +      ++ E+     L   I +  R    +   R
Sbjct: 61  NVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR--FSEDEAR 118
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEG 546
           F        G+ Y H    +++ HRDLK  N LLD    P  KI  FG +++        
Sbjct: 119 F-FFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK 174
Query: 547 NTNRVVGTYGYMAPEYASDGQFSVK-SDVFSFGILLLEIVSG 587
           +T   VGT  Y+APE     ++  K +DV+S G+ L  ++ G
Sbjct: 175 DT---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI----AVKRLSKISEQGLKELK---NEIILFSK 439
           D F   + LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 42  DQFERIRTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E+ P   + S +  +   +  +   RF+         
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 155
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    K++DFG A+       +G T  + GT  Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E+ P   + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+++DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             L KL           ++ E+ P   + S +  +   +  +   RF+          YL
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 158
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+++DQ    K++DFG A+       +G T  + GT  Y+APE 
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 42  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             L KL           ++ E+ P   + S +  +   +  +   RF+          YL
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 158
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+++DQ    K++DFG A+       +G T  + GT  Y+APE 
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 210
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 372 LDLPLFELATIANATDNFSINKKLGEGGFGP--VYKGTLADEQEIAVKRLSKISEQGLKE 429
           LD+P      I + +D +   K +G G FG   + +  L  E  +AVK + + +    + 
Sbjct: 11  LDMP------IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKEL-VAVKYIERGAAID-EN 62
Query: 430 LKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
           ++ EII    L+H N+V+     +      +I E+     L   I +  R    +    F
Sbjct: 63  VQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFF 122
Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGN 547
             +     G+ Y H    ++I HRDLK  N LLD    P  KI DFG +++         
Sbjct: 123 QQLLS---GVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS---SVLHSQ 173
Query: 548 TNRVVGTYGYMAPEYASDGQFSVK-SDVFSFGILLLEIVSG 587
               VGT  Y+APE     ++  K +DV+S G+ L  ++ G
Sbjct: 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSK--ISEQGLKE------LKNEI 434
           D + ++K LG G  G V    LA E    +++A+K +SK   +    +E      ++ EI
Sbjct: 10  DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
            +  KL H  ++K+       E+  ++ E M    L   +   +R K       F+ +  
Sbjct: 67  EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRV 551
             +   YLH++    IIHRDLK  NVLL   ++D   KI+DFG ++  G    E +  R 
Sbjct: 126 AVQ---YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRT 175
Query: 552 V-GTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  Y+APE         ++   D +S G++L   +SG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 377 FELATIANAT--DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGL--KELK 431
           F+ A I N    DN+ I   +G G +G VY     +  + +A+K+++++ E  +  K + 
Sbjct: 16  FQGAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL 75
Query: 432 NEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE--FMPNKSLDSFIFDQERCKLLDWSKRF 489
            EI + ++L+   +++L    I   E LL ++  ++  +  DS +    +  +    +  
Sbjct: 76  REITILNRLKSDYIIRLHDLII--PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHV 133
Query: 490 H-IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
             I+     G  ++H+     IIHRDLK +N LL+QD + KI DFGLAR    D+
Sbjct: 134 KTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSK--ISEQGLKE------LKNEI 434
           D + ++K LG G  G V    LA E    +++A+K +SK   +    +E      ++ EI
Sbjct: 10  DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
            +  KL H  ++K+       E+  ++ E M    L   +   +R K       F+ +  
Sbjct: 67  EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRV 551
             +   YLH++    IIHRDLK  NVLL   ++D   KI+DFG ++  G    E +  R 
Sbjct: 126 AVQ---YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRT 175
Query: 552 V-GTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  Y+APE         ++   D +S G++L   +SG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSK--ISEQGLKE------LKNEI 434
           D + ++K LG G  G V    LA E    +++A+K +SK   +    +E      ++ EI
Sbjct: 9   DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 65
Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
            +  KL H  ++K+       E+  ++ E M    L   +   +R K       F+ +  
Sbjct: 66  EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRV 551
             +   YLH++    IIHRDLK  NVLL   ++D   KI+DFG ++  G    E +  R 
Sbjct: 125 AVQ---YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRT 174
Query: 552 V-GTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  Y+APE         ++   D +S G++L   +SG
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSK--ISEQGLKE------LKNEI 434
           D + ++K LG G  G V    LA E    +++A+K +SK   +    +E      ++ EI
Sbjct: 10  DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
            +  KL H  ++K+       E+  ++ E M    L   +   +R K       F+ +  
Sbjct: 67  EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRV 551
             +   YLH++    IIHRDLK  NVLL   ++D   KI+DFG ++  G    E +  R 
Sbjct: 126 AVQ---YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRT 175
Query: 552 V-GTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  Y+APE         ++   D +S G++L   +SG
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++     QG K  KN E+ +  KL H N+
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNI 75
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 189
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 446 VKLLGCCIH-GEEKLLIY-----EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L       GE+K ++Y     +++P              + L        +    R L
Sbjct: 76  VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 189
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSK--ISEQGLKE------LKNEI 434
           D + ++K LG G  G V    LA E    +++A+K +SK   +    +E      ++ EI
Sbjct: 16  DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 72
Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
            +  KL H  ++K+       E+  ++ E M    L   +   +R K       F+ +  
Sbjct: 73  EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRV 551
             +   YLH++    IIHRDLK  NVLL   ++D   KI+DFG ++  G    E +  R 
Sbjct: 132 AVQ---YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRT 181
Query: 552 V-GTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  Y+APE         ++   D +S G++L   +SG
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++     QG K  KN E+ +  KL H N+
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNI 75
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 189
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++     QG K  KN E+ +  KL H N+
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNI 75
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 189
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 55  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 170 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 223
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 224 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 254

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 36  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 93  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTF 149
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 150 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 201
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAG 229

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 33  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 88  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 148 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 201
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 202 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 232

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 57  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 111
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 172 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 225
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 226 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 256

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           + + I + LG G FG V++      ++  + +  K+       +K EI + +  +HRN++
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR-----FHIICGTARGLLY 501
            L       EE ++I+EF+    LD  IF++      + ++R      H +C     L +
Sbjct: 65  HLHESFESMEELVMIFEFISG--LD--IFERINTSAFELNEREIVSYVHQVC---EALQF 117
Query: 502 LHQDSRLRIIHRDLKASNVLLD--QDMNPKISDFGLARAFGGDETEGNTNRVVGTY-GYM 558
           LH  +   I H D++  N++    +    KI +FG AR        G+  R++ T   Y 
Sbjct: 118 LHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP----GDNFRLLFTAPEYY 170
Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSG 587
           APE       S  +D++S G L+  ++SG
Sbjct: 171 APEVHQHDVVSTATDMWSLGTLVYVLLSG 199

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSK--ISEQGLKE------LKNEI 434
           D + ++K LG G  G V    LA E    +++A++ +SK   +    +E      ++ EI
Sbjct: 149 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 205
Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
            +  KL H  ++K+       E+  ++ E M    L   +   +R K       F+ +  
Sbjct: 206 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRV 551
             +   YLH++    IIHRDLK  NVLL   ++D   KI+DFG ++  G    E +  R 
Sbjct: 265 AVQ---YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRT 314
Query: 552 V-GTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  Y+APE         ++   D +S G++L   +SG
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 49  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 103
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 164 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 217
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 218 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 248

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 29  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 83
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 84  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 144 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 197
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 198 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 228

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 62  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYA-AQIVLTF 175
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 176 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 227
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 33  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 88  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 148 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 201
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 202 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 232

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 55  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 170 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 223
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 224 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 254

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 40  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 94
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 95  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 155 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 208
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 209 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 239

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 91/219 (41%), Gaps = 35/219 (15%)
Query: 391 INKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKL 448
           + + L EGGF  VY+   +   +E A+KRL    E+  + +  E+    KL  H N+V+ 
Sbjct: 32  VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 449 LGCCIHGEEK--------LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
                 G+E+        LL+ E    + L  F+   E    L       I   T R + 
Sbjct: 92  CSAASIGKEESDTGQAEFLLLTELCKGQ-LVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA---------------RAFGGDETE 545
           ++H+  +  IIHRDLK  N+LL      K+ DFG A               RA   +E  
Sbjct: 151 HMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT 209
Query: 546 GNTNRVVGTYGYMAPEYA---SDGQFSVKSDVFSFGILL 581
            NT     T  Y  PE     S+     K D+++ G +L
Sbjct: 210 RNT-----TPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 26  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 80
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 81  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 141 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 194
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 195 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 225

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSK--ISEQGLKE------LKNEI 434
           D + ++K LG G  G V    LA E    +++A++ +SK   +    +E      ++ EI
Sbjct: 135 DEYIMSKTLGSGACGEV---KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEI 191
Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
            +  KL H  ++K+       E+  ++ E M    L   +   +R K       F+ +  
Sbjct: 192 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRV 551
             +   YLH++    IIHRDLK  NVLL   ++D   KI+DFG ++  G    E +  R 
Sbjct: 251 AVQ---YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG----ETSLMRT 300
Query: 552 V-GTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIVSG 587
           + GT  Y+APE         ++   D +S G++L   +SG
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 59  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 113
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 174 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 227
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 228 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 258

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 154
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 215 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 268
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 269 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 299

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 189
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 189
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 25  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 79
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 80  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 140 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 193
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 194 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 224

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 394 KLGEGGFGPVYKGTLADEQ---EIAVKRLSKISEQGLKELK-NEIILFSKLQHRNLVKLL 449
           +LG G FG V++  + D+Q   + AVK++       L+  +  E++  + L    +V L 
Sbjct: 81  RLGRGSFGEVHR--MEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
           G    G    +  E +   SL   + +Q     L   +  + +     GL YLH  SR R
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQ---GCLPEDRALYYLGQALEGLEYLH--SR-R 186
Query: 510 IIHRDLKASNVLLDQD-MNPKISDFGLA-----RAFGGDETEGNTNRVVGTYGYMAPEYA 563
           I+H D+KA NVLL  D  +  + DFG A        G D   G+   + GT  +MAPE  
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY--IPGTETHMAPEVV 244
Query: 564 SDGQFSVKSDVFSFGILLLEIVSG 587
                  K DV+S   ++L +++G
Sbjct: 245 LGRSCDAKVDVWSSCCMMLHMLNG 268

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 34  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 88
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 89  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 149 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 202
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 203 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 233

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 22  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 76
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 77  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 137 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-YR 190
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 191 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 221

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 383 ANATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGL--KELKNEIILFSK 439
            +  DN+ I   +G G +G VY     + E+ +A+K+++++ E  +  K +  EI + ++
Sbjct: 22  VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 440 LQHRNLVKLLGCCIHGE-----EKLLIYEFMPN---KSLDSFIF-DQERCKLLDWSKRFH 490
           L+   +++L    I  +     E  ++ E   +   K   + IF  +E  K         
Sbjct: 82  LKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKT-------- 133
Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           I+     G  ++H+     IIHRDLK +N LL+QD + K+ DFGLAR      +E +TN 
Sbjct: 134 ILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTIN---SEKDTNI 187
Query: 551 V 551
           V
Sbjct: 188 V 188

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 388 NFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN-EIILFSKLQHRNL 445
           +++  K +G G FG VY+  L D  E +A+K++ +      K  KN E+ +  KL H N+
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 446 VKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +   Y Y 
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-YR 189
Query: 559 APEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
           APE    A+D   S+  DV+S G +L E++ G+
Sbjct: 190 APELIFGATDYTSSI--DVWSAGCVLAELLLGQ 220

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 413 EIAVKRLSKISEQGLKEL--KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL 470
           E+  +RLS    + ++E   +   IL     H +++ L+          L+++ M    L
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL 187
Query: 471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI 530
             F +  E+  L +   R  I+      + +LH ++   I+HRDLK  N+LLD +M  ++
Sbjct: 188 --FDYLTEKVALSEKETR-SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRL 241
Query: 531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEY------ASDGQFSVKSDVFSFGILLLEI 584
           SDFG +      E       + GT GY+APE        +   +  + D+++ G++L  +
Sbjct: 242 SDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
Query: 585 VSGKKNRGFYHSDNKLNL 602
           ++G     F+H    L L
Sbjct: 299 LAGSP--PFWHRRQILML 314

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 42  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 99  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 155
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 207
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 122
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 123 VRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 175
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++F   K LG+G FG V          I V+  +      +K L+ E+I+        + 
Sbjct: 10  NDFDYLKLLGKGTFGKV----------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 59
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 60  ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 119
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH      +++RD+K  N++LD+D + KI+DFGL +   G           GT 
Sbjct: 120 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKXFCGTP 174
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 216

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++F   K LG+G FG V          I V+  +      +K L+ E+I+        + 
Sbjct: 5   NDFDYLKLLGKGTFGKV----------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 55  ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH      +++RD+K  N++LD+D + KI+DFGL +   G           GT 
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKXFCGTP 169
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 211

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 22/202 (10%)
Query: 394 KLGEGGFGPVYKGTLADEQ---EIAVKRLSKISEQGLKELK-NEIILFSKLQHRNLVKLL 449
           +LG G FG V++  + D+Q   + AVK++       L+  +  E++  + L    +V L 
Sbjct: 100 RLGRGSFGEVHR--MEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
           G    G    +  E +   SL   + +Q     L   +  + +     GL YLH  SR R
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQ---GCLPEDRALYYLGQALEGLEYLH--SR-R 205
Query: 510 IIHRDLKASNVLLDQD-MNPKISDFGLARAFGGD---ETEGNTNRVVGTYGYMAPEYASD 565
           I+H D+KA NVLL  D  +  + DFG A     D   ++    + + GT  +MAPE    
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 566 GQFSVKSDVFSFGILLLEIVSG 587
                K DV+S   ++L +++G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNG 287

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           A GL +L       II+RDLK  NV+LD + + KI+DFG+ +    D     T    GT 
Sbjct: 452 AIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGTP 506
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y+APE  +   +    D ++FG+LL E+++G+
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 387 DNFSINKKLGEGGFGPVY-KGTLADEQEIAVKRLSKISEQGLKELK---NEIILFSKLQH 442
           D F   K LG G FG V     +      A+K L K     LK+++   NE  +   +  
Sbjct: 41  DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++    + S +  +   +  +   RF+          YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTFEYL 157
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+APE 
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 209
Query: 563 ASDGQFSVKSDVFSFGILLLEIVSG 587
                ++   D ++ G+L+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++F   K LG+G FG V          I V+  +      +K L+ E+I+        + 
Sbjct: 8   NDFDYLKLLGKGTFGKV----------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 57
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 58  ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 117
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH      +++RD+K  N++LD+D + KI+DFGL +   G           GT 
Sbjct: 118 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKTFCGTP 172
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 214

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++F   K LG+G FG V          I V+  +      +K L+ E+I+        + 
Sbjct: 5   NDFDYLKLLGKGTFGKV----------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 55  ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH      +++RD+K  N++LD+D + KI+DFGL +   G           GT 
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKTFCGTP 169
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 211

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++F   K LG+G FG V          I V+  +      +K L+ E+I+        + 
Sbjct: 5   NDFDYLKLLGKGTFGKV----------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 55  ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH      +++RD+K  N++LD+D + KI+DFGL +   G           GT 
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKTFCGTP 169
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 211

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 62  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 175
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 176 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLA 227
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++F   K LG+G FG V          I V+  +      +K L+ E+I+        + 
Sbjct: 5   NDFDYLKLLGKGTFGKV----------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 55  ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH      +++RD+K  N++LD+D + KI+DFGL +   G           GT 
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKXFCGTP 169
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 211

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 28/224 (12%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++F   K LG+G FG V          I V+  +      +K L+ E+I+        + 
Sbjct: 5   NDFDYLKLLGKGTFGKV----------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 447 --KLLGCCIHGEEKLLIYEFMPNKSL---------DSFIFDQERCKLLDWSKRFHIICGT 495
             ++L    H     L Y F  +  L             F   R ++    +        
Sbjct: 55  ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L YLH      +++RD+K  N++LD+D + KI+DFGL +   G           GT 
Sbjct: 115 VSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKE--GISDGATMKXFCGTP 169
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            Y+APE   D  +    D +  G+++ E++ G+    FY+ D++
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHE 211

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+++DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           A GL +L       II+RDLK  NV+LD + + KI+DFG+ +    D     T    GT 
Sbjct: 131 AIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGTP 185
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y+APE  +   +    D ++FG+LL E+++G+
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 10  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 70  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 127
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 128 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 180
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 23/227 (10%)
Query: 374 LPLFELATIANATDNFSINK-------KLGEGGFGPVYKGTLADEQEI-AVKRL-SKISE 424
           +P  E      A +NF +         +LG G +G V K       +I AVKR+ + ++ 
Sbjct: 14  IPTTENLYFQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS 73
Query: 425 QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF---IFDQERCK 481
           Q  K L  ++ +  +             +  E  + I   + + SLD F   + D+ +  
Sbjct: 74  QEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTI 133
Query: 482 LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
             D   +  I     + L +LH  S+L +IHRD+K SNVL++     K  DFG++  +  
Sbjct: 134 PEDILGK--IAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGIS-GYLV 188
Query: 542 DETEGNTNRVVGTYGYMAPEYA----SDGQFSVKSDVFSFGILLLEI 584
           D+   + +   G   Y APE      +   +SVKSD++S GI  +E+
Sbjct: 189 DDVAKDID--AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ ++ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAG 234

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 122
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 123 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 175
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 24  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 84  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 141
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 142 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 194
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 24  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 84  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 141
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 142 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 194
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 9   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 69  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 126
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 127 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 179
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 122
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 123 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 175
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 25  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 85  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 142
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 143 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 195
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 8   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 68  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 125
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 126 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 178
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 179 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 28  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 85  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 141
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+D+    +++DFG A+       +G T  + GT  Y+A
Sbjct: 142 EYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 193
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAG 221

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 10  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 70  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 127
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 128 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 180
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 25  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 85  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 142
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 143 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 195
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 25  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 85  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 142
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 143 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 195
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 37  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 97  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 154
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 155 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 207
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 52  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 169
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 170 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 222
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 38  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 98  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 155
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 156 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 208
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 37  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 97  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 154
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 155 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 207
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 44  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 161
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 162 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 214
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 38  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 98  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 155
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 156 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 208
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 10  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 70  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 127
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 128 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 180
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 38  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 98  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 155
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 156 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 208
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 37  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 97  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 154
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 155 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 207
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 394 KLGEGGFGPVYKGTLADEQ---EIAVKRLSKISEQGLKELK-NEIILFSKLQHRNLVKLL 449
           +LG G FG V++  + D+Q   + AVK++       L+  +  E++  + L    +V L 
Sbjct: 79  RLGRGSFGEVHR--MKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 130
Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
           G    G    +  E +   SL   I  Q  C  L   +  + +     GL YLH     R
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLI-KQMGC--LPEDRALYYLGQALEGLEYLHTR---R 184
Query: 510 IIHRDLKASNVLLDQDMN-PKISDFGLARAFGGD---ETEGNTNRVVGTYGYMAPEYASD 565
           I+H D+KA NVLL  D +   + DFG A     D   ++    + + GT  +MAPE    
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 566 GQFSVKSDVFSFGILLLEIVSG 587
                K D++S   ++L +++G
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNG 266

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 32  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 92  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 149
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 150 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 202
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 203 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 38  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 98  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 155
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 156 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 208
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 37  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 97  SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 154
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 155 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 207
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCC 452
           LGEG    V     L   QE AVK + K        +  E+ +  + Q HRN+++L+   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
              +   L++E M   S+ S I  +     L+ S    ++   A  L +LH      I H
Sbjct: 81  EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---IAH 134
Query: 513 RDLKASNVLLDQ--DMNP-KISDFGLARA--FGGDETEGNTNRVV---GTYGYMAPE--- 561
           RDLK  N+L +    ++P KI DFGL       GD +  +T  ++   G+  YMAPE   
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 562 -YASDGQ-FSVKSDVFSFGILLLEIVSG 587
            ++ +   +  + D++S G++L  ++SG
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSG 222

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 386 TDNFSINKKLGEGGFGPV----YKGTLADEQEIAVKRLSKI-----SEQGLKELKNEIIL 436
            +++ + K +G G FG V    +K T    +  A+K LSK      S+      + +I+ 
Sbjct: 68  AEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
           F+      +V+L           ++ E+MP   L + + + +  +   W+ RF+    TA
Sbjct: 125 FANSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KWA-RFY----TA 175
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
             +L L     +  IHRD+K  N+LLD+  + K++DFG        E     +  VGT  
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPD 234
Query: 557 YMAPEY----ASDGQFSVKSDVFSFGILLLEIVSG 587
           Y++PE       DG +  + D +S G+ L E++ G
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 52  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 169
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 170 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 222
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 386 TDNFSINKKLGEGGFGPV----YKGTLADEQEIAVKRLSKI-----SEQGLKELKNEIIL 436
            +++ + K +G G FG V    +K T    +  A+K LSK      S+      + +I+ 
Sbjct: 73  AEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
           F+      +V+L           ++ E+MP   L + + + +  +   W+ RF+    TA
Sbjct: 130 FANSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KWA-RFY----TA 180
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
             +L L     +  IHRD+K  N+LLD+  + K++DFG        E     +  VGT  
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPD 239
Query: 557 YMAPEY----ASDGQFSVKSDVFSFGILLLEIVSG 587
           Y++PE       DG +  + D +S G+ L E++ G
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 57  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E  P    D F F  ER  L +   R          
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEA 174
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 175 VRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 227
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 228 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 386 TDNFSINKKLGEGGFGPV----YKGTLADEQEIAVKRLSKI-----SEQGLKELKNEIIL 436
            +++ + K +G G FG V    +K T    +  A+K LSK      S+      + +I+ 
Sbjct: 73  AEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
           F+      +V+L           ++ E+MP   L + + + +  +   W+ RF+    TA
Sbjct: 130 FANSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KWA-RFY----TA 180
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
             +L L     +  IHRD+K  N+LLD+  + K++DFG        E     +  VGT  
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDTAVGTPD 239
Query: 557 YMAPEY----ASDGQFSVKSDVFSFGILLLEIVSG 587
           Y++PE       DG +  + D +S G+ L E++ G
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 393 KKLGEGGFGPV-YKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGC 451
           +KLGEGGF  V     L D    A+KR+    +Q  +E + E  +     H N+++L+  
Sbjct: 35  QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 452 CIH----GEEKLLIYEFMPNKSLDSFIFDQERCK----LLDWSKRFHIICGTARGLLYLH 503
           C+       E  L+  F    +L + I   ER K     L   +   ++ G  RGL  +H
Sbjct: 95  CLRERGAKHEAWLLLPFFKRGTLWNEI---ERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV--------GTY 555
                   HRDLK +N+LL  +  P + D G +        EG+   +          T 
Sbjct: 152 AKG---YAHRDLKPTNILLGDEGQPVLMDLG-SMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 556 GYMAPEYASDGQFSV---KSDVFSFGILLLEIVSGK 588
            Y APE  S     V   ++DV+S G +L  ++ G+
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 387 DNFSI--NKKLGEGGFGPVYKG-TLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQ 441
           +NF I  +K+LG G F  V +  + +  QE A K L K    +    E+ +EI +    +
Sbjct: 27  NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK 86
Query: 442 H-RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
               ++ L     +  E +LI E+     + S     E  +++  +    +I     G+ 
Sbjct: 87  SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLP-ELAEMVSENDVIRLIKQILEGVY 145
Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDM---NPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           YLHQ++   I+H DLK  N+LL       + KI DFG++R  G          ++GT  Y
Sbjct: 146 YLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH---ACELREIMGTPEY 199
Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS------GKKNRGFYHSDNKLNL 602
           +APE  +    +  +D+++ GI+   +++      G+ N+  Y + +++N+
Sbjct: 200 LAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV 250

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT  Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           P       ++   D ++ G+L+ E+ +G
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 24/235 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH-RN 444
           D++ + +KLG G +  V++   + + +++ VK L  + +    ++K EI +   L+   N
Sbjct: 37  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKN---KIKREIKILENLRGGPN 93
Query: 445 LVKLLGCCIHGEEKL--LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           ++ L         +   L++E + N       F Q    L D+  RF++     + L Y 
Sbjct: 94  IITLADIVKDPVSRTPALVFEHVNNTD-----FKQLYQTLTDYDIRFYM-YEILKALDYC 147
Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           H    + I+HRD+K  NV++D +    ++ D+GLA  +   + E N  RV   Y +  PE
Sbjct: 148 HS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-EYNV-RVASRY-FKGPE 201
Query: 562 YASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYH-SDNKLNLIRHAWKLWNEGM 614
              D Q +    D++S G +L  ++  K+   F+H  DN   L+R A  L  E +
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKE--PFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 22/219 (10%)
Query: 377 FELATIANATDNFSINKKLGEGGFG----PVYKGTLADEQEIAVKRLSKISEQGLKELKN 432
           F+ +T  +    +++   +G G +G     V KGT       A K++ K   + +   K 
Sbjct: 16  FQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRR---AAKKIPKYFVEDVDRFKQ 72
Query: 433 EIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHII 492
           EI +   L H N+++L        +  L+ E      L   +  +   +  D ++   I+
Sbjct: 73  EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IM 129
Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLL--DQDMNP-KISDFGLARAFGGDETEGNTN 549
                 + Y H   +L + HRDLK  N L   D   +P K+ DFGLA  F      G   
Sbjct: 130 KDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF----KPGKMM 182
Query: 550 RV-VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           R  VGT  Y++P+   +G +  + D +S G+++  ++ G
Sbjct: 183 RTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSKL 440
            + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K+
Sbjct: 9   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 441 QH--RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
                 +++LL      +  +LI E M     D F F  ER  L +   R          
Sbjct: 69  SSGFSGVIRLLDWFERPDSFVLILERM-EPVQDLFDFITERGALQEELAR-SFFWQVLEA 126
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGY 557
           + + H      ++HRD+K  N+L+D +    K+ DFG + A   D    + +   GT  Y
Sbjct: 127 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFD---GTRVY 179
Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSG 587
             PE+    ++  +S  V+S GILL ++V G
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 394 KLGEGGFGPVYKGTLADEQ---EIAVKRLSKISEQGLKELK-NEIILFSKLQHRNLVKLL 449
           ++G G FG V++  + D+Q   + AVK++       L+  +  E++  + L    +V L 
Sbjct: 65  RVGRGSFGEVHR--MKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 116
Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
           G    G    +  E +   SL   I  Q  C  L   +  + +     GL YLH     R
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLI-KQMGC--LPEDRALYYLGQALEGLEYLHTR---R 170
Query: 510 IIHRDLKASNVLLDQDMN-PKISDFGLARAFGGD---ETEGNTNRVVGTYGYMAPEYASD 565
           I+H D+KA NVLL  D +   + DFG A     D   ++    + + GT  +MAPE    
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 566 GQFSVKSDVFSFGILLLEIVSG 587
                K D++S   ++L +++G
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNG 252

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 394 KLGEGGFGPVYKGTLADEQ---EIAVKRLSKISEQGLKELK-NEIILFSKLQHRNLVKLL 449
           ++G G FG V++  + D+Q   + AVK++       L+  +  E++  + L    +V L 
Sbjct: 81  RVGRGSFGEVHR--MKDKQTGFQCAVKKVR------LEVFRVEELVACAGLSSPRIVPLY 132
Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLR 509
           G    G    +  E +   SL   I  Q  C  L   +  + +     GL YLH     R
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLI-KQMGC--LPEDRALYYLGQALEGLEYLHTR---R 186
Query: 510 IIHRDLKASNVLLDQDMN-PKISDFGLARAFGGD---ETEGNTNRVVGTYGYMAPEYASD 565
           I+H D+KA NVLL  D +   + DFG A     D   ++    + + GT  +MAPE    
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 566 GQFSVKSDVFSFGILLLEIVSG 587
                K D++S   ++L +++G
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNG 268

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKN-EIILFSKLQHRNLVKLLGC 451
           K +G G FG V++  L +  E+A+K++ +      K  KN E+ +   ++H N+V L   
Sbjct: 46  KVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 452 CIHGEEKL------LIYEFMPNK----SLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
                +K       L+ E++P      S       Q    LL     + ++    R L Y
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL----RSLAY 156
Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           +H    + I HRD+K  N+LLD      K+ DFG A+     E   N + +   Y Y AP
Sbjct: 157 IHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP--NVSXICSRY-YRAP 210
Query: 561 EYA-SDGQFSVKSDVFSFGILLLEIVSGK 588
           E       ++   D++S G ++ E++ G+
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQ 239

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKELK---NEIILFSK 439
           D F   K LG G FG V    L   +E     A+K L K     LK+++   NE  +   
Sbjct: 41  DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +    LVKL           ++ E++    + S +  +   +  +   RF+         
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYA-AQIVLTF 154
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT   +A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALA 206
Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSG 587
           PE      ++   D ++ G+L+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 380 ATIANATDNFSINKKLGEGGFG----PVYKGTLADEQEIAVKRLSKISEQGLKELKNEII 435
           +T  +    +++   +G G +G     V KGT       A K++ K   + +   K EI 
Sbjct: 2   STKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRR---AAKKIPKYFVEDVDRFKQEIE 58
Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           +   L H N+++L        +  L+ E      L   +  +   +  D ++   I+   
Sbjct: 59  IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDV 115
Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLL--DQDMNP-KISDFGLARAFGGDETEGNTNRV- 551
              + Y H   +L + HRDLK  N L   D   +P K+ DFGLA  F      G   R  
Sbjct: 116 LSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF----KPGKMMRTK 168
Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           VGT  Y++P+   +G +  + D +S G+++  ++ G
Sbjct: 169 VGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 134/325 (41%), Gaps = 50/325 (15%)
Query: 379 LATIAN---ATDNFSINKK-LGEGGFGPV-YKGTLADEQEIAVKR-LSKISEQGLKELKN 432
           +A I N   +  N  +++K LG G  G V ++G+    + +AVKR L    +  L E+K 
Sbjct: 21  IANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQG-RPVAVKRMLIDFCDIALMEIK- 78
Query: 433 EIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI----FDQERCKLLDWSKR 488
             +L     H N+++   C    +  L I   + N +L   +       E  KL      
Sbjct: 79  --LLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 135
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-------------QDMNPKISDFGL 535
             ++   A G+ +LH    L+IIHRDLK  N+L+              +++   ISDFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 536 ARAF--GGDETEGNTNRVVGTYGYMAPEYASDG---QFSVKSDVFSFGILLLEIVSGKKN 590
            +    G      N N   GT G+ APE   +    + +   D+FS G +   I+S  K+
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 591 RGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDR 650
                   + N+IR  + L  + M       C  D   +AE    I       Q    D 
Sbjct: 253 PFGDKYSRESNIIRGIFSL--DEM------KCLHDRSLIAEATDLIS------QMIDHDP 298
Query: 651 PCMPSVILMLGSEIVLPQPKQPGYL 675
              P+ + +L   +  P+ K+  +L
Sbjct: 299 LKRPTAMKVLRHPLFWPKSKKLEFL 323

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 386 TDNFSINKKLGEGGFGPVYKGTLADE-QEIAVKRLSK--------ISEQGLKELKNEIIL 436
           +  +S    LG G FG V+     ++ +E+ VK + K        I +  L ++  EI +
Sbjct: 23  SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
            S+++H N++K+L    +     L+ E      LD F F  +R   LD     +I     
Sbjct: 83  LSRVEHANIIKVLDIFENQGFFQLVME-KHGSGLDLFAF-IDRHPRLDEPLASYIFRQLV 140
Query: 497 RGLLYLHQDSRLR-IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
             + YL    RL+ IIHRD+K  N+++ +D   K+ DFG A      E         GT 
Sbjct: 141 SAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGTI 193
Query: 556 GYMAPEYASDGQF-SVKSDVFSFGILLLEIV 585
            Y APE      +   + +++S G+ L  +V
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 134/325 (41%), Gaps = 50/325 (15%)
Query: 379 LATIAN---ATDNFSINKK-LGEGGFGPV-YKGTLADEQEIAVKR-LSKISEQGLKELKN 432
           +A I N   +  N  +++K LG G  G V ++G+    + +AVKR L    +  L E+K 
Sbjct: 21  IANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQG-RPVAVKRMLIDFCDIALMEIK- 78
Query: 433 EIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI----FDQERCKLLDWSKR 488
             +L     H N+++   C    +  L I   + N +L   +       E  KL      
Sbjct: 79  --LLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 135
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-------------QDMNPKISDFGL 535
             ++   A G+ +LH    L+IIHRDLK  N+L+              +++   ISDFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 536 ARAF--GGDETEGNTNRVVGTYGYMAPEYASDG---QFSVKSDVFSFGILLLEIVSGKKN 590
            +    G      N N   GT G+ APE   +    + +   D+FS G +   I+S  K+
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 591 RGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDR 650
                   + N+IR  + L  + M       C  D   +AE    I       Q    D 
Sbjct: 253 PFGDKYSRESNIIRGIFSL--DEM------KCLHDRSLIAEATDLIS------QMIDHDP 298
Query: 651 PCMPSVILMLGSEIVLPQPKQPGYL 675
              P+ + +L   +  P+ K+  +L
Sbjct: 299 LKRPTAMKVLRHPLFWPKSKKLEFL 323

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 21/208 (10%)
Query: 395 LGEGGFGPVYKG-TLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCC 452
           LGEG    V     L   QE AVK + K        +  E+ +  + Q HRN+++L+   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 453 IHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIH 512
              +   L++E M   S+ S I  +     L+ S    ++   A  L +LH      I H
Sbjct: 81  EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---IAH 134
Query: 513 RDLKASNVLLDQ--DMNP-KISDFGLARA--FGGDETEGNTNRVV---GTYGYMAPE--- 561
           RDLK  N+L +    ++P KI DF L       GD +  +T  ++   G+  YMAPE   
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 562 -YASDGQ-FSVKSDVFSFGILLLEIVSG 587
            ++ +   +  + D++S G++L  ++SG
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSG 222

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 19/219 (8%)
Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILF 437
           E + +     +F     LG G  G +    + D +++AVKR   I  +       E+ L 
Sbjct: 15  ETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKR---ILPECFSFADREVQLL 71
Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
            +  +H N+++   C     +   I   +   +L  ++  ++   L    +   ++  T 
Sbjct: 72  RESDEHPNVIRYF-CTEKDRQFQYIAIELCAATLQEYVEQKDFAHL--GLEPITLLQQTT 128
Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQ-----DMNPKISDFGLARAFG-GDETEGNTNR 550
            GL +LH    L I+HRDLK  N+L+        +   ISDFGL +    G  +    + 
Sbjct: 129 SGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185
Query: 551 VVGTYGYMAPEYASDG---QFSVKSDVFSFGILLLEIVS 586
           V GT G++APE  S+      +   D+FS G +   ++S
Sbjct: 186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 19/235 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADE-QEIAVKRLSK---ISEQGL--KELKNEIILFSKL 440
           D + + + +G+G F  V +    +  Q+ AVK +      S  GL  ++LK E  +   L
Sbjct: 26  DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLL-DWSKRFHIICGTARGL 499
           +H ++V+LL          +++EFM    L   I  +     +   +   H +      L
Sbjct: 86  KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP---KISDFGLARAFGGDETEGNTNRVVGTYG 556
            Y H ++   IIHRD+K   VLL    N    K+  FG+A   G  E+       VGT  
Sbjct: 146 RYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPH 200
Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL--NLIRHAWKL 609
           +MAPE      +    DV+  G++L  ++SG     FY +  +L   +I+  +K+
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERLFEGIIKGKYKM 253

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 387 DNFSINKKLGEGGFGPVYKGTLADE-QEIAVKRLSK---ISEQGL--KELKNEIILFSKL 440
           D + + + +G+G F  V +    +  Q+ AVK +      S  GL  ++LK E  +   L
Sbjct: 24  DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF--HIICGTARG 498
           +H ++V+LL          +++EFM    L   I  +     + +S+    H +      
Sbjct: 84  KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSEAVASHYMRQILEA 142
Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP---KISDFGLARAFGGDETEGNTNRVVGTY 555
           L Y H ++   IIHRD+K   VLL    N    K+  FG+A   G  E+       VGT 
Sbjct: 143 LRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTP 197
Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
            +MAPE      +    DV+  G++L  ++SG
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 142/339 (41%), Gaps = 57/339 (16%)
Query: 379 LATIAN---ATDNFSINKK-LGEGGFGPV-YKGTLADEQEIAVKR-LSKISEQGLKELKN 432
           +A I N   +  N  +++K LG G  G V ++G+    + +AVKR L    +  L E+K 
Sbjct: 3   IANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQG-RPVAVKRMLIDFCDIALMEIK- 60
Query: 433 EIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI----FDQERCKLLDWSKR 488
             +L     H N+++   C    +  L I   + N +L   +       E  KL      
Sbjct: 61  --LLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 117
Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-------------QDMNPKISDFGL 535
             ++   A G+ +LH    L+IIHRDLK  N+L+              +++   ISDFGL
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 536 ARAF--GGDETEGNTNRVVGTYGYMAPEYASDG-------QFSVKSDVFSFGILLLEIVS 586
            +    G      N N   GT G+ APE   +        + +   D+FS G +   I+S
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 587 -GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQ 645
            GK   G  +S  + N+IR  + L  + M       C  D   +AE    I       Q 
Sbjct: 235 KGKHPFGDKYS-RESNIIRGIFSL--DEM------KCLHDRSLIAEATDLIS------QM 279
Query: 646 YPEDRPCMPSVILMLGSEIVLPQPKQPGYLADRKSTRLD 684
              D    P+ + +L   +  P+ K+  +L  + S RL+
Sbjct: 280 IDHDPLKRPTAMKVLRHPLFWPKSKKLEFLL-KVSDRLE 317
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	706
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-141
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-137
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-122
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-93
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-76
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-64
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-62
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-60
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-60
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-60
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-58
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-58
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-58
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	7e-55
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-52
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-52
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-51
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-50
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-49
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-46
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-45
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-45
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-45
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-45
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-45
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	5e-45
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	8e-45
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-44
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-44
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-44
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-44
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-44
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-44
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-44
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	8e-44
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-43
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-43
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-43
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-43
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-43
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-43
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-43
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-43
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-43
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-43
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-43
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-43
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	7e-43
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	7e-43
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	7e-43
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-43
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-43
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-42
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-42
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-42
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-42
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-42
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-42
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-42
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-42
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-42
2a19_B	284	Interferon-induced, double-stranded RNA-activated	8e-42
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	9e-42
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	9e-42
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-41
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-41
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-41
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-41
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-41
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-41
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-40
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-40
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	8e-40
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-39
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-39
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-38
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-38
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-38
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-38
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-38
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-37
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-37
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-36
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-36
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	6e-36
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-35
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-35
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-35
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-35
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-35
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-34
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-34
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-34
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-34
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-34
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-34
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-34
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-33
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-33
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-33
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-33
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-33
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-33
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-32
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-32
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-32
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-31
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-31
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-31
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-31
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-30
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-30
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-29
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-29
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-29
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	7e-29
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-28
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-28
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-28
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-28
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	8e-28
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	8e-28
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	8e-28
3niz_A	311	Rhodanese family protein; structural genomics, str	9e-28
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-27
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-27
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-27
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-27
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-27
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-27
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-27
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-27
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-27
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	6e-27
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	6e-27
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	9e-27
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-26
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-26
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-26
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-26
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	7e-26
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	8e-26
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	8e-26
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-26
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-25
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-25
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-25
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-25
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-25
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-25
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-25
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-24
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-24
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-24
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-24
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-24
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-24
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-24
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-24
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	8e-24
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	9e-24
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-23
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-23
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-23
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-23
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-23
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-23
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-23
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-23
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-23
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	5e-23
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-23
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-23
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-23
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-22
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-22
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-22
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-22
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-22
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	9e-22
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-21
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-21
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-21
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-21
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	5e-21
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	6e-21
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	5e-20
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	5e-20
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-20
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-20
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-19
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-19
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-19
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-19
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-19
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-19
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	6e-19
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-13
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-18
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-18
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-18
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-18
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-18
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-18
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-18
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-18
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-18
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-18
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	7e-18
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-17
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-17
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-17
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-17
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-17
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-17
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-17
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-17
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-16
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-15
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	6e-15
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	9e-15
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-14
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-12
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-11
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-10
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	2e-10
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	3e-09
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-09
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	8e-09
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	8e-09
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	9e-09
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	3e-08
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	4e-08
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	4e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  415 bits (1069), Expect = e-141
 Identities = 102/309 (33%), Positives = 160/309 (51%), Gaps = 22/309 (7%)

Query: 366 EDQNIDL---DLPLFELATIANATDNFS------INKKLGEGGFGPVYKGTLADEQEIAV 416
           E++++++       F    + N T+NF          K+GEGGFG VYKG + +   +AV
Sbjct: 1   ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59

Query: 417 KRLSKI----SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDS 472
           K+L+ +    +E+  ++   EI + +K QH NLV+LLG    G++  L+Y +MPN SL  
Sbjct: 60  KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119

Query: 473 FIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD 532
            +   +    L W  R  I  G A G+ +LH++     IHRD+K++N+LLD+    KISD
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISD 176

Query: 533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRG 592
           FGLARA         T+R+VGT  YMAPE    G+ + KSD++SFG++LLEI++G     
Sbjct: 177 FGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 235

Query: 593 FYHSDNKLNLIRHAWKLWNEGMP-SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            +       L+    ++ +E       ID    D  +   V     +   C+ +    RP
Sbjct: 236 EHREPQ--LLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRP 292

Query: 652 CMPSVILML 660
            +  V  +L
Sbjct: 293 DIKKVQQLL 301

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  403 bits (1039), Expect = e-137
 Identities = 119/306 (38%), Positives = 176/306 (57%), Gaps = 6/306 (1%)

Query: 366 EDQNIDLDLP-LFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISE 424
           ED  + L     F L  +  A+DNFS    LG GGFG VYKG LAD   +AVKRL +   
Sbjct: 8   EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT 67

Query: 425 QGLK-ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL- 482
           QG + + + E+ + S   HRNL++L G C+   E+LL+Y +M N S+ S + ++   +  
Sbjct: 68  QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 127

Query: 483 LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 542
           LDW KR  I  G+ARGL YLH     +IIHRD+KA+N+LLD++    + DFGLA+     
Sbjct: 128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187

Query: 543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKN--RGFYHSDNKL 600
           +T   T  V GT G++APEY S G+ S K+DVF +G++LLE+++G++        +D+ +
Sbjct: 188 DTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246

Query: 601 NLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
            L+     L  E     L+D   + ++   EV + I + LLC Q  P +RP M  V+ ML
Sbjct: 247 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306

Query: 661 GSEIVL 666
             + + 
Sbjct: 307 EGDGLA 312

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  366 bits (942), Expect = e-122
 Identities = 103/308 (33%), Positives = 160/308 (51%), Gaps = 6/308 (1%)

Query: 355 NRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEI 414
              N   +  +    +  +     L  +  AT+NF     +G G FG VYKG L D  ++
Sbjct: 7   KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66

Query: 415 AVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI 474
           A+KR +  S QG++E + EI   S  +H +LV L+G C    E +LIY++M N +L   +
Sbjct: 67  ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL 126

Query: 475 FDQERCKL-LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDF 533
           +  +   + + W +R  I  G ARGL YLH  +   IIHRD+K+ N+LLD++  PKI+DF
Sbjct: 127 YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDF 183

Query: 534 GLARAF-GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRG 592
           G+++     D+T  +T  V GT GY+ PEY   G+ + KSDV+SFG++L E++  +    
Sbjct: 184 GISKKGTELDQTHLST-VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242

Query: 593 FYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC 652
                  +NL   A +  N G   Q++D    D      + +     + C+    EDRP 
Sbjct: 243 QSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302

Query: 653 MPSVILML 660
           M  V+  L
Sbjct: 303 MGDVLWKL 310

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  290 bits (744), Expect = 7e-93
 Identities = 74/323 (22%), Positives = 128/323 (39%), Gaps = 33/323 (10%)

Query: 360 GTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRL 419
           G    +    +DL        ++        + +    G FG V+K  L   + +AVK  
Sbjct: 2   GHHHHHHSSGVDLGTENLYFQSM-----PLQLLEVKARGRFGCVWKAQL-LNEYVAVKIF 55

Query: 420 SKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE----EKLLIYEFMPNKSLDSFIF 475
               +Q   + + E+     ++H N+++ +G    G     +  LI  F    SL  F+ 
Sbjct: 56  PIQDKQS-WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL- 113

Query: 476 DQERCKLLDWSKRFHIICGTARGLLYLHQD-------SRLRIIHRDLKASNVLLDQDMNP 528
              +  ++ W++  HI    ARGL YLH+D        +  I HRD+K+ NVLL  ++  
Sbjct: 114 ---KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170

Query: 529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-----QFSVKSDVFSFGILLLE 583
            I+DFGLA  F   ++ G+T+  VGT  YMAPE             ++ D+++ G++L E
Sbjct: 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWE 230

Query: 584 IVSGKKNRGFYHSDNKLNLIRHAWKLWN-EGMPS----QLIDACFKDSFNLAEVIRCI-H 637
           + S          +  L       +  + E M      +      +D +     +  +  
Sbjct: 231 LASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCE 290

Query: 638 IGLLCVQQYPEDRPCMPSVILML 660
               C     E R     V   +
Sbjct: 291 TIEECWDHDAEARLSAGCVGERI 313

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  248 bits (635), Expect = 1e-76
 Identities = 73/322 (22%), Positives = 121/322 (37%), Gaps = 42/322 (13%)

Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN 444
             DN  + + +G G +G VYKG+L DE+ +AVK  S  + Q     K  I     ++H N
Sbjct: 11  DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEK-NIYRVPLMEHDN 68

Query: 445 LVKLLGCCIHGE-----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           + + +            E LL+ E+ PN SL  ++         DW     +     RGL
Sbjct: 69  IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGL 124

Query: 500 LYLHQD------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG------DETEGN 547
            YLH +       +  I HRDL + NVL+  D    ISDFGL+    G       E +  
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184

Query: 548 TNRVVGTYGYMAPEYASD-------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL 600
               VGT  YMAPE                + D+++ G++  EI     +     S  + 
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244

Query: 601 NLIRHAWKLWNEGMPSQLIDA-CFK-------DSFNLAEVIRCIHIGLL--CVQQYPEDR 650
            +     ++ N      +      +       +++    +        +  C  Q  E R
Sbjct: 245 QMA-FQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEAR 303

Query: 651 PCMPSVILMLGSEIVLPQPKQP 672
                    + +E+++   +  
Sbjct: 304 LTAQXAEERM-AELMMIWERNK 324

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  214 bits (548), Expect = 2e-64
 Identities = 71/287 (24%), Positives = 130/287 (45%), Gaps = 23/287 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRL--SKISEQGLKELKNEIILFSKLQHRN 444
            + +I +K+G G FG V++       ++AVK L       + + E   E+ +  +L+H N
Sbjct: 37  CDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +V  +G         ++ E++   SL   +      + LD  +R  +    A+G+ YLH 
Sbjct: 96  IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS 564
                I+HR+LK+ N+L+D+    K+ DFGL+R      T  ++    GT  +MAPE   
Sbjct: 156 -RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK--ASTFLSSKSAAGTPEWMAPEVLR 212

Query: 565 DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK 624
           D   + KSDV+SFG++L E+ + ++    +     LN  +    +  +    ++      
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQ---PWG---NLNPAQVVAAVGFKCKRLEIPRNLNP 266

Query: 625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS--EIVLPQP 669
               +A +I        C    P  RP   +++ +L    +  +P P
Sbjct: 267 Q---VAAIIE------GCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  210 bits (536), Expect = 1e-62
 Identities = 74/288 (25%), Positives = 122/288 (42%), Gaps = 26/288 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
               + + +G G FG V K      +++A+K++   SE   K    E+   S++ H N+V
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKWRA-KDVAIKQI--ESESERKAFIVELRQLSRVNHPNIV 64

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           KL G C+      L+ E+    SL + +   E       +         ++G+ YLH   
Sbjct: 65  KLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122

Query: 507 RLRIIHRDLKASNVLLDQDMN-PKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
              +IHRDLK  N+LL       KI DFG A      + + +     G+  +MAPE    
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEG 177

Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD 625
             +S K DVFS+GI+L E+++ +K    +  +      R  W + N   P  LI    K 
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRK---PF-DEIGGPAFRIMWAVHNGTRPP-LIKNLPKP 232

Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS-EIVLPQPKQP 672
              +  ++        C  + P  RP M  ++ ++       P   +P
Sbjct: 233 ---IESLMTR------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  203 bits (519), Expect = 2e-60
 Identities = 72/289 (24%), Positives = 135/289 (46%), Gaps = 38/289 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQG-------LKELKNEIILFS 438
           +     K++G+GGFG V+KG  + D+  +A+K L     +G        +E + E+ + S
Sbjct: 19  NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78

Query: 439 KLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
            L H N+VKL G         ++ EF+P   L   + D+     + WS +  ++   A G
Sbjct: 79  NLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALG 134

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQ-----DMNPKISDFGLARAFGGDETEGNTNRVVG 553
           + Y+       I+HRDL++ N+ L        +  K++DFGL++     ++  + + ++G
Sbjct: 135 IEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLG 188

Query: 554 TYGYMAPE--YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN 611
            + +MAPE   A +  ++ K+D +SF ++L  I++G+     +  +     I+    +  
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG---PF-DEYSYGKIKFINMIRE 244

Query: 612 EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
           EG+   + + C      L  VI       LC    P+ RP    ++  L
Sbjct: 245 EGLRPTIPEDCPPR---LRNVIE------LCWSGDPKKRPHFSYIVKEL 284

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  202 bits (517), Expect = 2e-60
 Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 36/282 (12%)

Query: 391 INKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQ----GLKELKNEIILFSKLQHRNLV 446
           + + +G GGFG VY+       E+AVK      ++     ++ ++ E  LF+ L+H N++
Sbjct: 11  LEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
            L G C+      L+ EF     L+  +      K +      +     ARG+ YLH ++
Sbjct: 70  ALRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYLHDEA 125

Query: 507 RLRIIHRDLKASNVLLDQDMNP--------KISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            + IIHRDLK+SN+L+ Q +          KI+DFGLAR +             G Y +M
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA----GAYAWM 181

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE      FS  SDV+S+G+LL E+++G+     +     ++ +  A+ +    +   +
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEV---PFRG---IDGLAVAYGVAMNKLALPI 235

Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
              C +     A+++        C    P  RP   +++  L
Sbjct: 236 PSTCPEP---FAKLME------DCWNPDPHSRPSFTNILDQL 268

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  204 bits (520), Expect = 3e-60
 Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 18/216 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
            +    + LG+G FG   K T     + + +K L +  E+  +    E+ +   L+H N+
Sbjct: 10  SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           +K +G     +    I E++   +L   I   +      WS+R       A G+ YLH  
Sbjct: 70  LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHS- 126

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR------------VVG 553
             + IIHRDL + N L+ ++ N  ++DFGLAR    ++T+    R            VVG
Sbjct: 127 --MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKK 589
              +MAPE  +   +  K DVFSFGI+L EI+    
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVN 220

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  199 bits (507), Expect = 1e-58
 Identities = 78/316 (24%), Positives = 143/316 (45%), Gaps = 44/316 (13%)

Query: 353 RENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQ 412
             + ++ G+    +D  I       ++          ++ +++G G FG VYKG      
Sbjct: 4   GHHHHHHGSRDAADDWEIPDG----QI----------TVGQRIGSGSFGTVYKGKW--HG 47

Query: 413 EIAVKRL--SKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL-LIYEFMPNKS 469
           ++AVK L  +  + Q L+  KNE+ +  K +H N++  +G       +L ++ ++    S
Sbjct: 48  DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--APQLAIVTQWCEGSS 105

Query: 470 LDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPK 529
           L   +   E     +  K   I   TARG+ YLH      IIHRDLK++N+ L +D   K
Sbjct: 106 LYHHLHASET--KFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVK 160

Query: 530 ISDFGLARAFGGDETEGNTNRVVGTYGYMAPE---YASDGQFSVKSDVFSFGILLLEIVS 586
           I DFGLA             ++ G+  +MAPE         +S +SDV++FGI+L E+++
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220

Query: 587 GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI--DACFKDSFNLAEVIRCIHIGLLCVQ 644
           G+    + + +N+  +I    +      P        C K    +  ++        C++
Sbjct: 221 GQ--LPYSNINNRDQIIEMVGR--GSLSPDLSKVRSNCPKR---MKRLMA------ECLK 267

Query: 645 QYPEDRPCMPSVILML 660
           +  ++RP  P ++  +
Sbjct: 268 KKRDERPSFPRILAEI 283

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  196 bits (501), Expect = 6e-58
 Identities = 59/281 (20%), Positives = 117/281 (41%), Gaps = 32/281 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRL--SKISEQGLKELKNEIILFSKLQHRN 444
              +   KL E   G ++KG      +I VK L     S +  ++   E        H N
Sbjct: 10  KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68

Query: 445 LVKLLGCCIHGEEKLL--IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           ++ +LG C          I  +MP  SL + + +     ++D S+        ARG+ +L
Sbjct: 69  VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFL 127

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE- 561
           H    L I    L + +V++D+DM  +IS   +  +F        +   +    ++APE 
Sbjct: 128 HTLEPL-IPRHALNSRSVMIDEDMTARISMADVKFSF-------QSPGRMYAPAWVAPEA 179

Query: 562 --YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
                +      +D++SF +LL E+V+ +     +     L+ +    K+  EG+   + 
Sbjct: 180 LQKKPEDTNRRSADMWSFAVLLWELVTREV---PFA---DLSNMEIGMKVALEGLRPTIP 233

Query: 620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
                 S +++++++      +C+ + P  RP    ++ +L
Sbjct: 234 PGI---SPHVSKLMK------ICMNEDPAKRPKFDMIVPIL 265

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  189 bits (483), Expect = 7e-55
 Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 37/284 (13%)

Query: 391 INKKLGEGGFGPVYKGTLADEQEIAVKRL--SKISEQGLKELKNEIILFSKLQHRNLVKL 448
           I + +G+G FG VY G      E+A++ +   + +E  LK  K E++ + + +H N+V  
Sbjct: 37  IGELIGKGRFGQVYHGRW--HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94

Query: 449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRL 508
           +G C+      +I      ++L S + D +   +LD +K   I     +G+ YLH     
Sbjct: 95  MGACMSPPHLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHA---K 149

Query: 509 RIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR---VVGTYGYMAPE---- 561
            I+H+DLK+ NV  D +    I+DFGL    G  +     ++     G   ++APE    
Sbjct: 150 GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208

Query: 562 -----YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
                      FS  SDVF+ G +  E+ + +     + +          W++     P+
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP---FKT---QPAEAIIWQMGTGMKPN 262

Query: 617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
                  K+   +++++        C     E+RP    ++ ML
Sbjct: 263 LSQIGMGKE---ISDILL------FCWAFEQEERPTFTKLMDML 297

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  183 bits (467), Expect = 2e-52
 Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 26/237 (10%)

Query: 373 DLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKN 432
            LPL    TIA       + K++G+G +G V+ G     +++AVK      E      + 
Sbjct: 26  GLPLLVQRTIA---KQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEA-SWFRET 80

Query: 433 EIILFSKLQHRNLVKLLGCCIHGEEK----LLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
           EI     ++H N++  +   I G        LI ++  N SL  ++    +   LD    
Sbjct: 81  EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSM 136

Query: 489 FHIICGTARGLLYLHQDSRLR-----IIHRDLKASNVLLDQDMNPKISDFGLARAF--GG 541
             +   +  GL +LH +         I HRDLK+ N+L+ ++    I+D GLA  F    
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDT 196

Query: 542 DETEGNTNRVVGTYGYMAPE------YASDGQFSVKSDVFSFGILLLEIVSGKKNRG 592
           +E +   N  VGT  YM PE        +  Q  + +D++SFG++L E+     + G
Sbjct: 197 NEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGG 253

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  181 bits (462), Expect = 4e-52
 Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 30/231 (12%)

Query: 381 TIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNE--IILFS 438
           T+A    + ++ + +G+G +G V++G+    + +AVK     S +  K    E  +    
Sbjct: 5   TVA---RDITLLECVGKGRYGEVWRGSW-QGENVAVK---IFSSRDEKSWFRETELYNTV 57

Query: 439 KLQHRNLVKLLGCCIHGEEK----LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
            L+H N++  +   +          LI  +    SL  ++    +   LD      I+  
Sbjct: 58  MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLS 113

Query: 495 TARGLLYLHQDSRLR-----IIHRDLKASNVLLDQDMNPKISDFGLAR--AFGGDETEGN 547
            A GL +LH +         I HRDLK+ N+L+ ++    I+D GLA   +   ++ +  
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173

Query: 548 TNRVVGTYGYMAPE------YASDGQFSVKSDVFSFGILLLEIVSGKKNRG 592
            N  VGT  YMAPE               + D+++FG++L E+     + G
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNG 224

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  177 bits (451), Expect = 3e-50
 Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 28/239 (11%)

Query: 374 LPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG-LKELKN 432
           LPL    TIA       + + +G+G FG V++G     +E+AVK  S   E+   +E   
Sbjct: 32  LPLLVQRTIA---RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREA-- 85

Query: 433 EIILFSKLQHRNLVKLLGCCIHGEEK----LLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
           EI     L+H N++  +              L+ ++  + SL  ++        +     
Sbjct: 86  EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGM 141

Query: 489 FHIICGTARGLLYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GG 541
             +   TA GL +LH +      +  I HRDLK+ N+L+ ++    I+D GLA       
Sbjct: 142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 201

Query: 542 DETEGNTNRVVGTYGYMAPE------YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFY 594
           D  +   N  VGT  YMAPE           +   ++D+++ G++  EI       G +
Sbjct: 202 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  175 bits (446), Expect = 5e-49
 Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 15/206 (7%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRL-SKISEQGLKELKNEIILFSKLQHRN 444
           ++  + +++G G FG V+ G L AD   +AVK     +      +   E  +  +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +V+L+G C   +   ++ E +      +F+  +     L       ++   A G+ YL  
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLES 231

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY----MAP 560
                 IHRDL A N L+ +    KISDFG++R    +E +G      G         AP
Sbjct: 232 ---KCCIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAP 284

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVS 586
           E  + G++S +SDV+SFGILL E  S
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFS 310

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  164 bits (418), Expect = 6e-46
 Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 32/224 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKISEQGLKELKNEIILFSKL 440
            +  + ++LGEG FG V+           D+  +AVK L   +    K+ + E  L + L
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERCKLLDWSK 487
           QH ++VK  G C  G+  ++++E+M +  L+ F                ++    L  S+
Sbjct: 75  QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134

Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 547
             HI    A G++YL   +    +HRDL   N L+  ++  KI DFG++R    D    +
Sbjct: 135 MLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTD 187

Query: 548 TNRVVGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
             R VG +      +M PE     +F+ +SDV+SFG++L EI +
Sbjct: 188 YYR-VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  164 bits (418), Expect = 1e-45
 Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 31/223 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKISEQGLKELKNEIILFSKL 440
            +  +  +LGEG FG V+           D+  +AVK L + SE   ++ + E  L + L
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF------------IFDQERCKLLDWSKR 488
           QH+++V+  G C  G   L+++E+M +  L+ F              +      L   + 
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
             +    A G++YL   + L  +HRDL   N L+ Q +  KI DFG++R    D    + 
Sbjct: 161 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR----DIYSTDY 213

Query: 549 NRVVGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            R VG        +M PE     +F+ +SDV+SFG++L EI +
Sbjct: 214 YR-VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  161 bits (411), Expect = 2e-45
 Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 13/203 (6%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +  ++ K+LG G FG V  G    + ++AVK + K       E   E     KL H  LV
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLV 66

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           K  G C       ++ E++ N  L +++  +   K L+ S+   +      G+ +L    
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFL---E 121

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAPEYA 563
             + IHRDL A N L+D+D+  K+SDFG+ R    D+        VGT     + APE  
Sbjct: 122 SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV----SSVGTKFPVKWSAPEVF 177

Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              ++S KSDV++FGIL+ E+ S
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFS 200

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  163 bits (415), Expect = 3e-45
 Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 29/281 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQ 441
            +    ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQ
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 100

Query: 442 HRNLVKLLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           H N+VK  G C     +   LI E++P  SL  ++  Q+  + +D  K         +G+
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 158

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG--- 556
            YL      R IHRDL   N+L++ +   KI DFGL +    D+        V   G   
Sbjct: 159 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY----YKVKEPGESP 211

Query: 557 --YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM 614
             + APE  ++ +FSV SDV+SFG++L E+ +  +      ++    +           M
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQM 267

Query: 615 PSQLIDACFKDSFNLAEVIRC---IH-IGLLCVQQYPEDRP 651
               +    K++  L     C   I+ I   C       RP
Sbjct: 268 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP 308

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  162 bits (411), Expect = 3e-45
 Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 13/203 (6%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
            + +  K+LG G FG V  G    + ++A+K + K       E   E  +   L H  LV
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLV 82

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L G C       +I E+M N  L +++  +E        +   +       + YL    
Sbjct: 83  QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYL---E 137

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAPEYA 563
             + +HRDL A N L++     K+SDFGL+R    DE        VG+     +  PE  
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT----SSVGSKFPVRWSPPEVL 193

Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
              +FS KSD+++FG+L+ EI S
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYS 216

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  161 bits (409), Expect = 4e-45
 Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 13/203 (6%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
              +  +++G G FG V+ G   ++ ++A+K + +      ++   E  +  KL H  LV
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLV 66

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L G C+      L+ EFM +  L  ++  + +  L        +      G+ YL    
Sbjct: 67  QLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYL---E 121

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAPEYA 563
              +IHRDL A N L+ ++   K+SDFG+ R    D+         GT     + +PE  
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT----SSTGTKFPVKWASPEVF 177

Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
           S  ++S KSDV+SFG+L+ E+ S
Sbjct: 178 SFSRYSSKSDVWSFGVLMWEVFS 200

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  162 bits (411), Expect = 5e-45
 Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 29/290 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSKISEQGLKELKNEIILFSKLQ 441
            +    ++LG+G FG V        Q+     +AVK+L   +E+ L++ + EI +   LQ
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69

Query: 442 HRNLVKLLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           H N+VK  G C     +   LI E++P  SL  ++  Q+  + +D  K         +G+
Sbjct: 70  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 127

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG--- 556
            YL      R IHRDL   N+L++ +   KI DFGL +    D+        V   G   
Sbjct: 128 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF----FKVKEPGESP 180

Query: 557 --YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM 614
             + APE  ++ +FSV SDV+SFG++L E+ +  +      ++    +           M
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQM 236

Query: 615 PSQLIDACFKDSFNLAEVIRC---IH-IGLLCVQQYPEDRPCMPSVILML 660
               +    K++  L     C   I+ I   C       RP    + L +
Sbjct: 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  161 bits (410), Expect = 8e-45
 Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 21/209 (10%)

Query: 390 SINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRN 444
             N+ +G G FG VY GTL D    +   AVK L++I     + +   E I+     H N
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87

Query: 445 LVKLLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           ++ LLG C+  E   L +  +M +  L +FI  +                  A+G+ YL 
Sbjct: 88  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL- 144

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG------Y 557
             +  + +HRDL A N +LD+    K++DFGLAR    D  +     V    G      +
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKW 198

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E     +F+ KSDV+SFG+LL E+++
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMT 227

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  161 bits (409), Expect = 2e-44
 Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 27/219 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSK 439
           +  +++++LG+G FG VY+G          E  +A+K +++  S +   E  NE  +  +
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------IFDQERCKLLDWSKRFHII 492
               ++V+LLG    G+  L+I E M    L S+       + +         SK   + 
Sbjct: 85  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
              A G+ YL   +  + +HRDL A N ++ +D   KI DFG+ R    D  E +  R  
Sbjct: 145 GEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYR-K 196

Query: 553 GTYGY-----MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           G  G      M+PE   DG F+  SDV+SFG++L EI +
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  159 bits (405), Expect = 2e-44
 Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 11/202 (5%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L K           E  L  +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLV 71

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      KL   +K   +    A G+ ++    
Sbjct: 72  RLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFI---E 126

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY--MAPEYAS 564
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E    T R    +     APE  +
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAIN 183

Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
            G F++KSDV+SFGILL EIV+
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  160 bits (406), Expect = 2e-44
 Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 17/206 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
            + ++  KLG G +G VY+G        +AVK L K     ++E   E  +  +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 71

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V+LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL   
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYL--- 127

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN-----RVVGTYGYMAP 560
            +   IHRDL A N L+ ++   K++DFGL+R   GD    +       +      + AP
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK------WTAP 181

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVS 586
           E  +  +FS+KSDV++FG+LL EI +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIAT 207

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  160 bits (408), Expect = 2e-44
 Identities = 76/338 (22%), Positives = 126/338 (37%), Gaps = 69/338 (20%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
            +     +LG+G FG V               +AVK+L        ++ + EI +   L 
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82

Query: 442 HRNLVKLLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
              +VK  G       +   L+ E++P+  L  F+  Q     LD S+         +G+
Sbjct: 83  SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGM 140

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG--- 556
            YL      R +HRDL A N+L++ + + KI+DFGLA+    D+       VV   G   
Sbjct: 141 EYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY----YVVREPGQSP 193

Query: 557 --YMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEG 613
             + APE  SD  FS +SDV+SFG++L E+ +   K+                    +  
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKS-------------------CSPS 234

Query: 614 MPSQLIDACFKDSFNLAEVIRCIHIG-----------------LLCVQQYPEDRPCMPSV 656
                +  C +D   L+ ++  +  G                  LC    P+DRP   ++
Sbjct: 235 AEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294

Query: 657 ILMLGSEIVLPQPKQPGYLADRKSTRLDSSLSMPESSS 694
              L               +  +     +  + PE   
Sbjct: 295 GPQLDM-----------LWSGSRGCETHAFTAHPEGKH 321

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  164 bits (416), Expect = 3e-44
 Identities = 70/202 (34%), Positives = 100/202 (49%), Gaps = 11/202 (5%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  + KKLG G FG V+  T     ++AVK + K     ++    E  +   LQH  LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLV 246

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           KL       E   +I EFM   SL  F+   E        K        A G+ ++    
Sbjct: 247 KLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFI---E 301

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY--MAPEYAS 564
           +   IHRDL+A+N+L+   +  KI+DFGLAR    +E    T R    +     APE  +
Sbjct: 302 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAIN 358

Query: 565 DGQFSVKSDVFSFGILLLEIVS 586
            G F++KSDV+SFGILL+EIV+
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVT 380

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  160 bits (407), Expect = 5e-44
 Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 23/215 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSK-ISEQGLKELKNEIILFSKL 440
             F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  + + +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
            + ++ +LLG C+      LI + MP   L  ++  +E    +      +     A+G+ 
Sbjct: 75  DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMN 131

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG---- 556
           YL      R++HRDL A NVL+    + KI+DFGLA+  G +E E +        G    
Sbjct: 132 YL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG-----GKVPI 183

Query: 557 -YMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKK 589
            +MA E      ++ +SDV+S+G+ + E+++ G K
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  159 bits (405), Expect = 6e-44
 Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 33/217 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRL-SKISEQGLKELKNEIILFSKLQ 441
               I K +G G  G V  G L      +  +A+K L +  +E+  ++  +E  +  +  
Sbjct: 49  SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N+++L G    G   +++ E+M N SLD+F+  +         +   ++ G   G+ Y
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRY 166

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY---- 557
           L   S L  +HRDL A NVL+D ++  K+SDFGL+R    D                   
Sbjct: 167 L---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP-----------DAAYTTT 212

Query: 558 --------MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                    APE  +   FS  SDV+SFG+++ E+++
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  159 bits (404), Expect = 8e-44
 Identities = 64/213 (30%), Positives = 90/213 (42%), Gaps = 24/213 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRL-SKISEQGLKELKNEIILFSKL 440
                 + LGEG FG V         +     +AVK L +    Q     K EI +   L
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL 90

Query: 441 QHRNLVKLLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
            H +++K  GCC         L+ E++P  SL  ++        +  ++          G
Sbjct: 91  YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEG 146

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-- 556
           + YLH       IHRDL A NVLLD D   KI DFGLA+A             V   G  
Sbjct: 147 MAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY----YRVREDGDS 199

Query: 557 ---YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              + APE   + +F   SDV+SFG+ L E+++
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  163 bits (415), Expect = 1e-43
 Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 7/201 (3%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
            + ++  KLG G +G VY+G        +AVK L K     ++E   E  +  +++H NL
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNL 278

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V+LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL   
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYL--- 334

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
            +   IHR+L A N L+ ++   K++DFGL+R   GD    +         + APE  + 
Sbjct: 335 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAY 393

Query: 566 GQFSVKSDVFSFGILLLEIVS 586
            +FS+KSDV++FG+LL EI +
Sbjct: 394 NKFSIKSDVWAFGVLLWEIAT 414

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  158 bits (402), Expect = 1e-43
 Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 21/208 (10%)

Query: 391 INKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNL 445
            ++ +G+G FG VY G   D      + A+K LS+I   Q ++    E +L   L H N+
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84

Query: 446 VKLLGCCIHGEE-KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           + L+G  +  E    ++  +M +  L  FI  +   +              ARG+ YL  
Sbjct: 85  LALIGIMLPPEGLPHVLLPYMCHGDLLQFI--RSPQRNPTVKDLISFGLQVARGMEYL-- 140

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG------YM 558
            +  + +HRDL A N +LD+    K++DFGLAR    D  +     V           + 
Sbjct: 141 -AEQKFVHRDLAARNCMLDESFTVKVADFGLAR----DILDREYYSVQQHRHARLPVKWT 195

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVS 586
           A E     +F+ KSDV+SFG+LL E+++
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLT 223

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  157 bits (399), Expect = 1e-43
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
               + + +G+G FG V  G      ++AVK +   +    +    E  + ++L+H NLV
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 77

Query: 447 KLLGCCIHGEEKLLI-YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           +LLG  +  +  L I  E+M   SL  ++  + R  +L               + YL   
Sbjct: 78  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYL--- 133

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG------YMA 559
                +HRDL A NVL+ +D   K+SDFGL +    + +                  + A
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASST-------QDTGKLPVKWTA 182

Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVS 586
           PE   + +FS KSDV+SFGILL EI S
Sbjct: 183 PEALREKKFSTKSDVWSFGILLWEIYS 209

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  158 bits (402), Expect = 2e-43
 Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 34/223 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL---ADEQEIAVKRL-SKISEQGLKELKNEIILFSKL-Q 441
           ++      +GEG FG V K  +       + A+KR+    S+   ++   E+ +  KL  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERCKLLDWSKR 488
           H N++ LLG C H     L  E+ P+ +L  F                      L   + 
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
            H     ARG+ YL   S+ + IHRDL A N+L+ ++   KI+DFGL+R  G +     T
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKT 199

Query: 549 N-----RVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                 R      +MA E  +   ++  SDV+S+G+LL EIVS
Sbjct: 200 MGRLPVR------WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  159 bits (405), Expect = 2e-43
 Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 21/209 (10%)

Query: 390 SINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRN 444
             N+ +G G FG VY GTL D    +   AVK L++I     + +   E I+     H N
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151

Query: 445 LVKLLGCCIHGEEKLL-IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           ++ LLG C+  E   L +  +M +  L +FI  +                  A+G+ +L 
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFL- 208

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG------Y 557
             +  + +HRDL A N +LD+    K++DFGLAR    D  +   + V    G      +
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVKW 262

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           MA E     +F+ KSDV+SFG+LL E+++
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMT 291

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  157 bits (400), Expect = 2e-43
 Identities = 68/296 (22%), Positives = 111/296 (37%), Gaps = 59/296 (19%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRL-SKISEQGLKELKNEIILFSKL 440
                 + LGEG FG V       E +     +AVK L  +     + +LK EI +   L
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80

Query: 441 QHRNLVKLLGCCIHGEEK--LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
            H N+VK  G C         LI EF+P+ SL  ++   +    ++  ++        +G
Sbjct: 81  YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKG 138

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG-- 556
           + YL      + +HRDL A NVL++ +   KI DFGL +A   D+        V      
Sbjct: 139 MDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY----YTVKDDRDS 191

Query: 557 ---YMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNE 612
              + APE     +F + SDV+SFG+ L E+++    +       + + L        + 
Sbjct: 192 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS------SPMALFLKMIGPTHG 245

Query: 613 GMPSQLIDACFKDSFNLAEVIRCIHIG-----------------LLCVQQYPEDRP 651
            M                 ++  +  G                   C +  P +R 
Sbjct: 246 QMTVT-------------RLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRT 288

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  157 bits (400), Expect = 3e-43
 Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 41/233 (17%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSK 439
            N  + K LGEG FG V K T            +AVK L +  S   L++L +E  +  +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERCKLLDWS 486
           + H +++KL G C      LLI E+    SL  F                      LD  
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142

Query: 487 KRFHIICGT--------ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
               +  G         ++G+ YL   + ++++HRDL A N+L+ +    KISDFGL+R 
Sbjct: 143 DERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR- 198

Query: 539 FGGDETEGNTNRVVGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              D  E ++     + G     +MA E   D  ++ +SDV+SFG+LL EIV+
Sbjct: 199 ---DVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  157 bits (399), Expect = 3e-43
 Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 27/219 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSK--ISEQGLKELKNEIILFSKL 440
           +   + K LGEG FG V +G L        ++AVK +     S++ ++E  +E       
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93

Query: 441 QHRNLVKLLGCCIHGE-----EKLLIYEFMPNKSLDSFI---FDQERCKLLDWSKRFHII 492
            H N+++LLG CI        + ++I  FM    L +++     +   K +        +
Sbjct: 94  SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
              A G+ YL   S    +HRDL A N +L  DM   ++DFGL++        G+  R  
Sbjct: 154 VDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK----KIYSGDYYR-Q 205

Query: 553 GTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           G        ++A E  +D  ++ KSDV++FG+ + EI +
Sbjct: 206 GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  158 bits (401), Expect = 3e-43
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 36/228 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKI-SEQGLKELKNEIILF 437
           D  ++ K LGEG FG V                  +AVK L    +E+ L +L +E+ + 
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERCKLL 483
             + +H+N++ LLG C       +I E+    +L  +               ++   + +
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154

Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
            +          ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR    D 
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DI 207

Query: 544 TEGNTNRVVGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +  +   T G     +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 208 NNIDYYK-KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  157 bits (399), Expect = 5e-43
 Identities = 67/219 (30%), Positives = 98/219 (44%), Gaps = 27/219 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSK 439
            N ++ + LG G FG VY+G +          ++AVK L ++ SEQ   +   E ++ SK
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI----FDQERCKLLDWSKRFHIICGT 495
             H+N+V+ +G  +    + ++ E M    L SF+        +   L      H+    
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVV 552
           A G  YL        IHRD+ A N LL         KI DFG+AR    D    +  R  
Sbjct: 150 ACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYR-K 201

Query: 553 GTYGY-----MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           G         M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  160 bits (407), Expect = 5e-43
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 17/203 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
               + + +G+G FG V  G      ++AVK +   +    +    E  + ++L+H NLV
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRG-NKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 249

Query: 447 KLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           +LLG  +  +  L ++ E+M   SL  ++  + R  +L               + YL   
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYL--- 305

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY--MAPEYA 563
                +HRDL A NVL+ +D   K+SDFGL +       E ++ +  G       APE  
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEAL 358

Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
            + +FS KSDV+SFGILL EI S
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYS 381

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  156 bits (396), Expect = 6e-43
 Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 33/225 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSK 439
                 ++LGE  FG VYKG L         Q +A+K L         +E ++E +L ++
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERCKLLDWS 486
           LQH N+V LLG     +   +I+ +  +  L  F               D+     L+  
Sbjct: 69  LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128

Query: 487 KRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 546
              H++   A G+ YL   S   ++H+DL   NVL+   +N KISD GL R    +    
Sbjct: 129 DFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAA 181

Query: 547 NTNRVVGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +  + +         +MAPE    G+FS+ SD++S+G++L E+ S
Sbjct: 182 DYYK-LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  158 bits (401), Expect = 7e-43
 Identities = 83/341 (24%), Positives = 143/341 (41%), Gaps = 72/341 (21%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
            N SI+K +G G FG V  G L      E  +A+K L    +E+  ++   E  +  +  
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N+++L G     +  +++ E+M N SLDSF+  ++        +   ++ G A G+ Y
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKY 162

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG----- 556
           L   S +  +HRDL A N+L++ ++  K+SDFGL R    D           T G     
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-----AYTTRGGKIPI 214

Query: 557 -YMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGM 614
            + +PE  +  +F+  SDV+S+GI+L E++S G++    Y                   M
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---Y-----------------WEM 254

Query: 615 PSQLIDACFKDSFNLAEVIRCIHIG-----------------LLCVQQYPEDRPCMPSVI 657
            +Q             +VI+ +  G                 L C Q+   +RP    ++
Sbjct: 255 SNQ-------------DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301

Query: 658 LMLGSEIVLPQPKQPGYLADRKSTRLDSSLSMPESSSTNTI 698
            +L   I  P   +    A  + + L    S  + ++  T 
Sbjct: 302 SILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTT 342

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  157 bits (398), Expect = 7e-43
 Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 30/215 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRL-SKISEQGLKELKNEIILFSKL 440
                 K LG G FG V+KG    E E     + +K +  K   Q  + + + ++    L
Sbjct: 13  TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERC----KLLDWSKRFHIICGTA 496
            H ++V+LLG C  G    L+ +++P  SL   +           LL+W          A
Sbjct: 73  DHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG------VQIA 125

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           +G+ YL       ++HR+L A NVLL      +++DFG+A     D+ +     ++ +  
Sbjct: 126 KGMYYL---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ-----LLYSEA 177

Query: 557 -----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                +MA E    G+++ +SDV+S+G+ + E+++
Sbjct: 178 KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  156 bits (397), Expect = 7e-43
 Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 28/220 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSK--ISEQGLKELKNEIILFSKL 440
             F++ + LG+G FG V +  L        ++AVK L    I+   ++E   E     + 
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82

Query: 441 QHRNLVKLLGCCIHGEEK------LLIYEFMPNKSLDSFIFD---QERCKLLDWSKRFHI 491
            H ++ KL+G  +    K      ++I  FM +  L +F+      E    L        
Sbjct: 83  DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142

Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
           +   A G+ YL   S    IHRDL A N +L +DM   ++DFGL+R        G+  R 
Sbjct: 143 MVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR----KIYSGDYYR- 194

Query: 552 VGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            G        ++A E  +D  ++V SDV++FG+ + EI++
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  158 bits (401), Expect = 7e-43
 Identities = 67/219 (30%), Positives = 97/219 (44%), Gaps = 27/219 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSK 439
            N ++ + LG G FG VY+G +          ++AVK L ++ SEQ   +   E ++ SK
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI----FDQERCKLLDWSKRFHIICGT 495
             H+N+V+ +G  +    + ++ E M    L SF+        +   L      H+    
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVV 552
           A G  YL        IHRD+ A N LL         KI DFG+AR    D       R  
Sbjct: 191 ACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYR-K 242

Query: 553 GTYGY-----MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           G         M PE   +G F+ K+D +SFG+LL EI S
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  157 bits (398), Expect = 8e-43
 Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 14/208 (6%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSK-ISEQGLKELKNEIILFSKL 440
              +  K +G G FG VYKG L       E  +A+K L    +E+   +   E  +  + 
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
            H N+++L G     +  ++I E+M N +LD F+  +E+       +   ++ G A G+ 
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMK 161

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY--M 558
           YL   + +  +HRDL A N+L++ ++  K+SDFGL+R    D+ E       G       
Sbjct: 162 YL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWT 217

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVS 586
           APE  S  +F+  SDV+SFGI++ E+++
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMT 245

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  157 bits (399), Expect = 1e-42
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 36/228 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD--------EQEIAVKRL-SKISEQGLKELKNEIILF 437
           D  ++ K LGEG FG V                  +AVK L    +E+ L +L +E+ + 
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140

Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-------------IFDQERCKLL 483
             + +H+N++ LLG C       +I E+    +L  +               ++   + +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200

Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
            +          ARG+ YL   +  + IHRDL A NVL+ ++   KI+DFGLAR    D 
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DI 253

Query: 544 TEGNTNRVVGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +  +   T G     +MAPE   D  ++ +SDV+SFG+L+ EI +
Sbjct: 254 NNIDYYK-KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  156 bits (397), Expect = 2e-42
 Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 41/233 (17%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSK 439
           +N    + +GEG FG V++              +AVK L +  S     + + E  L ++
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF---------------------IFDQE 478
             + N+VKLLG C  G+   L++E+M    L+ F                          
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166

Query: 479 RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
               L  +++  I    A G+ YL   S  + +HRDL   N L+ ++M  KI+DFGL+R 
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR- 222

Query: 539 FGGDETEGNTNRVVGTYGY-----MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              +    +  +            M PE     +++ +SDV+++G++L EI S
Sbjct: 223 ---NIYSADYYK-ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  159 bits (403), Expect = 2e-42
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 7/200 (3%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 242

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   ++ E+M   SL  F+  +   K L   +   +    A G+ Y+    
Sbjct: 243 QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYV---E 297

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYG 356

Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 357 RFTIKSDVWSFGILLTELTT 376

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  154 bits (392), Expect = 3e-42
 Identities = 66/229 (28%), Positives = 93/229 (40%), Gaps = 38/229 (16%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSK 439
           +  S  K LG G FG V + T            +AVK L         + L +E+ + S 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF---------------IFDQERCKLL 483
           L  H N+V LLG C  G   L+I E+     L +F                  ++    L
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR-AFGGD 542
           D           A+G+ +L   +    IHRDL A N+LL      KI DFGLAR      
Sbjct: 143 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199

Query: 543 ETEGNTN-----RVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                 N     +      +MAPE   +  ++ +SDV+S+GI L E+ S
Sbjct: 200 NYVVKGNARLPVK------WMAPESIFNCVYTFESDVWSYGIFLWELFS 242

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  155 bits (393), Expect = 3e-42
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 22/211 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRL-SKISEQGLKELKNEIILFSKL 440
             F   K LG G FG VYKG    E E     +A+K L    S +  KE+ +E  + + +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
            + ++ +LLG C+      LI + MP   L  ++  +E    +      +     A+G+ 
Sbjct: 75  DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNWCVQIAKGMN 131

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG---- 556
           YL      R++HRDL A NVL+    + KI+DFGLA+  G +E E +        G    
Sbjct: 132 YL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG-----GKVPI 183

Query: 557 -YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
            +MA E      ++ +SDV+S+G+ + E+++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  160 bits (405), Expect = 3e-42
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 7/200 (3%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L K      +    E  +  KL+H  LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLV 325

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   ++ E+M   SL  F+  +   K L   +   +    A G+ Y+    
Sbjct: 326 QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYV---E 380

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
           R+  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYG 439

Query: 567 QFSVKSDVFSFGILLLEIVS 586
           +F++KSDV+SFGILL E+ +
Sbjct: 440 RFTIKSDVWSFGILLTELTT 459

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  155 bits (393), Expect = 4e-42
 Identities = 75/224 (33%), Positives = 102/224 (45%), Gaps = 32/224 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRL-SKISEQGLKELKNEIILFSK 439
           +N    K LG G FG V + T           ++AVK L S       + L +E+ + S 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105

Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR---------- 488
           L QH N+V LLG C HG   L+I E+     L +F+  + R    D +            
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165

Query: 489 -FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN 547
             H     A+G+ +L   +    IHRD+ A NVLL      KI DFGLAR    D    +
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR----DIMNDS 218

Query: 548 TNRVVGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               V         +MAPE   D  ++V+SDV+S+GILL EI S
Sbjct: 219 NYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  155 bits (393), Expect = 6e-42
 Identities = 55/268 (20%), Positives = 120/268 (44%), Gaps = 25/268 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           + +   +K+GEG FG         D ++  +K   +S++S +  +E + E+ + + ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+V+            ++ ++     L   I + ++  L    +           L ++H
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQICLALKHVH 142

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
                +I+HRD+K+ N+ L +D   ++ DFG+AR              +GT  Y++PE  
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGTPYYLSPEIC 197

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF 623
            +  ++ KSD+++ G +L E+ + K     + + +  NL+    K+ +   P   +   +
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHA---FEAGSMKNLVL---KIISGSFPP--VSLHY 249

Query: 624 KDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
             S++L  ++          ++ P DRP
Sbjct: 250 --SYDLRSLVS------QLFKRNPRDRP 269

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  153 bits (388), Expect = 6e-42
 Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 38/222 (17%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL--------ADEQEIAVKRLSKISEQGLKELKNEIILFS 438
           ++   N+ LG+G F  ++KG            E E+ +K L K      +       + S
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67

Query: 439 KLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           KL H++LV   G C+ G+E +L+ EF+   SLD+++  ++    ++   +  +    A  
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAA 125

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNP--------KISDFGLARAFGGDETEGNTNR 550
           + +L       +IH ++ A N+LL ++ +         K+SD G++      +       
Sbjct: 126 MHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD------- 175

Query: 551 VVGTYGY-----MAPEYASDG-QFSVKSDVFSFGILLLEIVS 586
                       + PE   +    ++ +D +SFG  L EI S
Sbjct: 176 ----ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  152 bits (387), Expect = 8e-42
 Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 49/288 (17%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
            +F   + +G GGFG V+K     D +   +KR+   +E    + + E+   +KL H N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNI 66

Query: 446 VKLLGC---------------CIHGEEKLLIY-EFMPNKSLDSFIFDQERCKLLDWSKRF 489
           V   GC                    + L I  EF    +L+ +I ++ R + LD     
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLAL 125

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN 549
            +     +G+ Y+H     ++I+RDLK SN+ L      KI DFGL  +    + +G   
Sbjct: 126 ELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSL---KNDGKRT 179

Query: 550 RVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL 609
           R  GT  YM+PE  S   +  + D+++ G++L E++        + +      +R     
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT--AFETSKFFTDLRD---- 233

Query: 610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
                   +I   F        +++     LL  +  PEDRP    ++
Sbjct: 234 -------GIISDIF--DKKEKTLLQ----KLLSKK--PEDRPNTSEIL 266

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  153 bits (389), Expect = 9e-42
 Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 35/227 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRL-SKISEQGLKELKNEIILFSK 439
           D   + K LG G FG V +            + +AVK L    +    + L +E+ +   
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 440 L-QHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT-- 495
           +  H N+V LLG C      L +I EF    +L +++  +    +        +      
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146

Query: 496 -----------ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
                      A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR----DIY 199

Query: 545 EGNTNRVVGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +                +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 200 KDPDYV-RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  154 bits (391), Expect = 9e-42
 Identities = 69/233 (29%), Positives = 102/233 (43%), Gaps = 41/233 (17%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRL-SKISEQGLKELKNEIILFSK 439
           +N    K LG G FG V   T           ++AVK L  K      + L +E+ + ++
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSF-----------IFDQERCKLLDWSK 487
           L  H N+V LLG C       LI+E+     L ++             + E  K L+  +
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164

Query: 488 RFHIICGT---------ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
             +++            A+G+ +L        +HRDL A NVL+      KI DFGLAR 
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLAR- 220

Query: 539 FGGDETEGNTNRVVGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
              D    +    V         +MAPE   +G +++KSDV+S+GILL EI S
Sbjct: 221 ---DIMSDSNYV-VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  155 bits (393), Expect = 1e-41
 Identities = 70/229 (30%), Positives = 106/229 (46%), Gaps = 38/229 (16%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKI-SEQGLKELKNEIILF 437
           D   + K LGEG FG V                 ++AVK L    +E+ L +L +E+ + 
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128

Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT- 495
             + +H+N++ LLG C       +I E+    +L  ++    R   L++S          
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQ 187

Query: 496 -------------ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 542
                        ARG+ YL   +  + IHRDL A NVL+ +D   KI+DFGLAR    D
Sbjct: 188 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----D 240

Query: 543 ETEGNTNRVVGTYG-----YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               +  +   T G     +MAPE   D  ++ +SDV+SFG+LL EI +
Sbjct: 241 IHHIDYYK-KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  151 bits (384), Expect = 3e-41
 Identities = 58/214 (27%), Positives = 87/214 (40%), Gaps = 26/214 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRL---SKISEQGLKELKNEIILFSK 439
            +  + +KLG+G FG V +G           +AVK L        + + +   E+     
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQER----CKLLDWSKRFHIICGT 495
           L HRNL++L G  +      ++ E  P  SL   +   +       L  ++         
Sbjct: 78  LDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA------VQV 130

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT- 554
           A G+ YL      R IHRDL A N+LL      KI DFGL RA   ++            
Sbjct: 131 AEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE--HRK 185

Query: 555 --YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
             + + APE      FS  SD + FG+ L E+ +
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  150 bits (382), Expect = 3e-41
 Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 22/210 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSK-ISEQGLKELKNEIILFSKLQ 441
           +   + + +GEG FG V++G           +A+K      S+   ++   E +   +  
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G         +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 75  HPHIVKLIGVIT-ENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 131

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG----- 556
           L      R +HRD+ A NVL+  +   K+ DFGL+R                + G     
Sbjct: 132 L---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY------YKASKGKLPIK 182

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
           +MAPE  +  +F+  SDV+ FG+ + EI+ 
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILM 212

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  151 bits (383), Expect = 3e-41
 Identities = 65/289 (22%), Positives = 113/289 (39%), Gaps = 45/289 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHRN 444
            +F   + LG GGFG V++     D+   A+KR+     E   +++  E+   +KL+H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 445 LVKLLGCCIHGEE---------KLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFHII 492
           +V+     +             K+ +Y   +    ++L  ++  +   +  + S   HI 
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV- 551
              A  + +LH      ++HRDLK SN+    D   K+ DFGL  A   DE E       
Sbjct: 125 LQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181

Query: 552 ---------VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL 602
                    VGT  YM+PE      +S K D+FS G++L E++       F     ++  
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL-----YPFSTQMERVRT 236

Query: 603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
           +              L    +        +++     +L     P +RP
Sbjct: 237 LTDV----RNLKFPPLFTQKYPC---EYVMVQ----DMLSPS--PMERP 272

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  150 bits (381), Expect = 5e-41
 Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 18/208 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQ 441
           ++  +N+ LGEG FG VY+G       ++  +AVK   K  +    ++  +E ++   L 
Sbjct: 12  EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 71

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G     E   +I E  P   L  ++  +     L             + + Y
Sbjct: 72  HPHIVKLIGIIE-EEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAY 128

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYM 558
           L     +  +HRD+   N+L+      K+ DFGL+R    ++      +   T     +M
Sbjct: 129 L---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY----KASVTRLPIKWM 181

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVS 586
           +PE  +  +F+  SDV+ F + + EI+S
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILS 209

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  150 bits (380), Expect = 7e-41
 Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 33/212 (15%)

Query: 391 INKKLGEGGFGPVYKGTL---ADEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLV 446
            + +LG G FG V +G       + ++A+K L +   +   +E+  E  +  +L +  +V
Sbjct: 14  ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L+G C   E  +L+ E      L  F+    + + +  S    ++   + G+ YL    
Sbjct: 74  RLIGVCQ-AEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYL---E 127

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY--------- 557
               +HRDL A NVLL      KISDFGL++A G D++            Y         
Sbjct: 128 EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY-----------YTARSAGKWP 176

Query: 558 ---MAPEYASDGQFSVKSDVFSFGILLLEIVS 586
               APE  +  +FS +SDV+S+G+ + E +S
Sbjct: 177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  149 bits (379), Expect = 1e-40
 Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 23/206 (11%)

Query: 392 NKKLGEGGFGPVYKGTL---ADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG        + +AVK L           EL  E  +  +L +  +V
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++   ++ + +       ++   + G+ YL    
Sbjct: 82  RMIGICE-AESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL---E 134

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG------YMAP 560
               +HRDL A NVLL      KISDFGL++A   DE                   + AP
Sbjct: 135 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT-----HGKWPVKWYAP 189

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVS 586
           E  +  +FS KSDV+SFG+L+ E  S
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFS 215

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  148 bits (376), Expect = 2e-40
 Identities = 61/269 (22%), Positives = 117/269 (43%), Gaps = 31/269 (11%)

Query: 391 INKKLGEGGFGPVYKGTLADE-QEIAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVK 447
            + ++G G F  VYKG   +   E+A    +  K+++   +  K E  +   LQH N+V+
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR 89

Query: 448 LLGCCIH---GEEKLLIY-EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
                     G++ +++  E M + +L +++   +R K++             +GL +LH
Sbjct: 90  FYDSWESTVKGKKCIVLVTELMTSGTLKTYL---KRFKVMKIKVLRSWCRQILKGLQFLH 146

Query: 504 QDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
             +   IIHRDLK  N+ +     + KI D GLA      +       V+GT  +MAPE 
Sbjct: 147 TRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFMAPEM 201

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC 622
             +  +    DV++FG+ +LE+ + +      +  ++       ++    G+     D  
Sbjct: 202 YEEK-YDESVDVYAFGMCMLEMATSE------YPYSECQNAAQIYRRVTSGVKPASFDKV 254

Query: 623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
                 + E+I        C++Q  ++R 
Sbjct: 255 A--IPEVKEIIE------GCIRQNKDERY 275

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  147 bits (374), Expect = 8e-40
 Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 27/272 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRL---SKISEQGLKELKNEIILFSKLQH 442
            NF I KK+G G F  VY+   L D   +A+K++     +  +   +   EI L  +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 443 RNLVKLLGCCIHGEEKLLIY-EFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLL 500
            N++K     I  + +L I  E      L   I    ++ +L+     +         L 
Sbjct: 92  PNVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           ++H     R++HRD+K +NV +      K+ D GL R F    T  ++  +VGT  YM+P
Sbjct: 151 HMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSP 205

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFY-HSDNKLNLIRHAWKLWNEGMPSQLI 619
           E   +  ++ KSD++S G LL E+ + +    FY    N  +L +       +     L 
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYGDKMNLYSLCKKI----EQCDYPPLP 259

Query: 620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
              +  S  L +++       +C+   PE RP
Sbjct: 260 SDHY--SEELRQLVN------MCINPDPEKRP 283

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  146 bits (370), Expect = 4e-39
 Identities = 66/307 (21%), Positives = 119/307 (38%), Gaps = 46/307 (14%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++   +KLGEGGF  V     L D    A+KR+    +Q  +E + E  +     H N++
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89

Query: 447 KLLGCCI----HGEEKLLIYEFMPNKSLDSFIFD-QERCKLLDWSKRFHIICGTARGLLY 501
           +L+  C+       E  L+  F    +L + I   +++   L   +   ++ G  RGL  
Sbjct: 90  RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV-------GT 554
           +H        HRDLK +N+LL  +  P + D G                 +        T
Sbjct: 150 IHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206

Query: 555 YGYMAPE------YASDGQFSVKSDVFSFGILLLEIVSGKK--NRGFYHSDNKLNLIRHA 606
             Y APE      +    +   ++DV+S G +L  ++ G+   +  F   D+    +++ 
Sbjct: 207 ISYRAPELFSVQSHCVIDE---RTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263

Query: 607 WKL-WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV 665
             +  +    S L             ++      ++ V   P  RP +P ++  L   + 
Sbjct: 264 LSIPQSPRHSSALWQ-----------LLN----SMMTVD--PHQRPHIPLLLSQL-EALQ 305

Query: 666 LPQPKQP 672
            P P Q 
Sbjct: 306 PPAPGQH 312

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  144 bits (365), Expect = 7e-39
 Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +++ +   +G G +G   K    +D + +  K      ++E   + L +E+ L  +L+H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 444 NLVKLLGCCIHGEEKLL--IYEFMPNKSLDSFIFDQERCK-LLDWSKRFHIICGTARGLL 500
           N+V+     I      L  + E+     L S I    + +  LD      ++      L 
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125

Query: 501 YLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
             H+  D    ++HRDLK +NV LD   N K+ DFGLAR    D +   T   VGT  YM
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYM 183

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           +PE  +   ++ KSD++S G LL E+ +  
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALM 213

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  151 bits (382), Expect = 1e-38
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)

Query: 391 INKKLGEGGFGPVYKGTLADEQE---IAVKRL-SKISEQGLKELKNEIILFSKLQHRNLV 446
            + +LG G FG V +G     ++   +A+K L     +   +E+  E  +  +L +  +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L+G C   E  +L+ E      L  F+    + + +  S    ++   + G+ YL    
Sbjct: 400 RLIGVCQ-AEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYL---E 453

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT---YGYMAPEYA 563
               +HR+L A NVLL      KISDFGL++A G D++               + APE  
Sbjct: 454 EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR--SAGKWPLKWYAPECI 511

Query: 564 SDGQFSVKSDVFSFGILLLEIVS 586
           +  +FS +SDV+S+G+ + E +S
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALS 534

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  151 bits (383), Expect = 1e-38
 Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 12/205 (5%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRL-SKISEQGLKELKNEIILFSKLQ 441
           +   + + +GEG FG V++G           +A+K   +  S+   ++   E +   +  
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G         +I E      L SF+  Q R   LD +         +  L Y
Sbjct: 450 HPHIVKLIGVIT-ENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAY 506

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+  +   K+ DFGL+R          +   +    +MAPE
Sbjct: 507 L---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPE 562

Query: 562 YASDGQFSVKSDVFSFGILLLEIVS 586
             +  +F+  SDV+ FG+ + EI+ 
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILM 587

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  143 bits (364), Expect = 2e-38
 Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 25/233 (10%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKR--LSKISEQGLKELKNEIILFSKLQHRNL 445
            +SI K++G GG   V++     +Q  A+K   L +   Q L   +NEI   +KLQ  + 
Sbjct: 29  IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88

Query: 446 --VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
             ++L    I  +   ++ E   N  L+S++  ++    +D  +R          +  +H
Sbjct: 89  KIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIH 144

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-- 561
           Q     I+H DLK +N L+  D   K+ DFG+A     D T    +  VGT  YM PE  
Sbjct: 145 Q---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200

Query: 562 ---------YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH 605
                      S  + S KSDV+S G +L  +  GK    F    N+++ +  
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKLHA 251

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  143 bits (362), Expect = 3e-38
 Identities = 72/299 (24%), Positives = 121/299 (40%), Gaps = 60/299 (20%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN 444
             +F     LG+G FG V K     D +  A+K++   +E+ L  + +E++L + L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQY 63

Query: 445 LVKLLGC----------CIHGEEKLLIY---EFMPNKSLDSFIFDQ----ERCKLLDWSK 487
           +V+                  ++K  ++   E+  N +L   I  +    +R +      
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL-- 121

Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF-------- 539
            F  I      L Y+H      IIHRDLK  N+ +D+  N KI DFGLA+          
Sbjct: 122 -FRQIL---EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174

Query: 540 ----GGDETEGNTNRVVGTYGYMAPE-YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFY 594
                   +  N    +GT  Y+A E     G ++ K D++S GI+  E++       F 
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-----PFS 229

Query: 595 HSDNKLNLIRHAWKLWNE--GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
               ++N+++   KL +     P    D   K      ++IR     L+     P  RP
Sbjct: 230 TGMERVNILK---KLRSVSIEFPPDFDDNKMKV---EKKIIRL----LIDHD--PNKRP 276

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  142 bits (361), Expect = 4e-38
 Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 19/205 (9%)

Query: 393 KKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGC 451
             LG+G +G VY G     Q  IA+K + +   +  + L  EI L   L+H+N+V+ LG 
Sbjct: 28  VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87

Query: 452 CIHGEEKLLIY-EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR----GLLYLHQDS 506
                  + I+ E +P  SL + +  + +   L  ++    I    +    GL YLH + 
Sbjct: 88  FSE-NGFIKIFMEQVPGGSLSALL--RSKWGPLKDNE--QTIGFYTKQILEGLKYLHDN- 141

Query: 507 RLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE--YA 563
             +I+HRD+K  NVL++      KISDFG ++   G      T    GT  YMAPE    
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--FTGTLQYMAPEIIDK 197

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGK 588
               +   +D++S G  ++E+ +GK
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGK 222

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  144 bits (364), Expect = 1e-37
 Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 25/233 (10%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKR--LSKISEQGLKELKNEIILFSKLQHRNL 445
            +SI K++G GG   V++     +Q  A+K   L +   Q L   +NEI   +KLQ  + 
Sbjct: 57  IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116

Query: 446 --VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
             ++L    I  +   ++ E   N  L+S++  ++    +D  +R          +  +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIH 172

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-- 561
           Q     I+H DLK +N L+  D   K+ DFG+A     D T    +  VG   YM PE  
Sbjct: 173 Q---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228

Query: 562 ---------YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH 605
                      S  + S KSDV+S G +L  +  GK    F    N+++ +  
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQISKLHA 279

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  142 bits (360), Expect = 1e-37
 Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 25/233 (10%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNL 445
            +SI K++G GG   V++     +Q  A+K ++      Q L   +NEI   +KLQ  + 
Sbjct: 10  IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69

Query: 446 --VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
             ++L    I  +   ++ E   N  L+S++  ++    +D  +R          +  +H
Sbjct: 70  KIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIH 125

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-- 561
           Q     I+H DLK +N L+  D   K+ DFG+A     D T    +  VGT  YM PE  
Sbjct: 126 Q---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181

Query: 562 ---------YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH 605
                      S  + S KSDV+S G +L  +  GK    F    N+++ +  
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK--TPFQQIINQISKLHA 232

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  137 bits (347), Expect = 4e-36
 Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 10/214 (4%)

Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEI 434
           L E +      + F + +KLGEG +G VYK       Q +A+K++    E  L+E+  EI
Sbjct: 18  LDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKEI 75

Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICG 494
            +  +    ++VK  G      +  ++ E+    S+   I  + R K L   +   I+  
Sbjct: 76  SIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQS 133

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
           T +GL YLH     R IHRD+KA N+LL+ + + K++DFG+A      +T    N V+GT
Sbjct: 134 TLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGT 188

Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             +MAPE   +  ++  +D++S GI  +E+  GK
Sbjct: 189 PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  137 bits (346), Expect = 4e-36
 Identities = 55/217 (25%), Positives = 116/217 (53%), Gaps = 16/217 (7%)

Query: 376 LFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEI 434
           L  + ++ +    ++  +K+G+G  G VY    +A  QE+A+++++   +   + + NEI
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68

Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--I 492
           ++  + ++ N+V  L   + G+E  ++ E++   SL   +       +        I  +
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCM----DEGQIAAV 121

Query: 493 C-GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
           C    + L +LH +   ++IHRD+K+ N+LL  D + K++DFG       ++++ +T  +
Sbjct: 122 CRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--M 176

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           VGT  +MAPE  +   +  K D++S GI+ +E++ G+
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  137 bits (346), Expect = 6e-36
 Identities = 63/269 (23%), Positives = 97/269 (36%), Gaps = 32/269 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKL-QH 442
            +F    +LG G +G V+K     D +  AVKR        +       E+    K+ QH
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
              V+L      G    L  E     SL      +     L  ++ +  +  T   L +L
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELC-GPSLQQHC--EAWGASLPEAQVWGYLRDTLLALAHL 173

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H      ++H D+K +N+ L      K+ DFGL    G   T G      G   YMAPE 
Sbjct: 174 HS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG---TAGAGEVQEGDPRYMAPE- 226

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC 622
              G +   +DVFS G+ +LE+    +     H       +R           + L    
Sbjct: 227 LLQGSYGTAADVFSLGLTILEVACNME---LPHGGEGWQQLRQ--GYLPPEFTAGL---- 277

Query: 623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
              S  L  V+       + ++  P+ R 
Sbjct: 278 ---SSELRSVLV------MMLEPDPKLRA 297

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  136 bits (344), Expect = 2e-35
 Identities = 60/258 (23%), Positives = 102/258 (39%), Gaps = 30/258 (11%)

Query: 339 KSRRNIVVNIARYFRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEG 398
           K+  +    + R   E  +N G     + + +D +                +   ++G G
Sbjct: 18  KTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYE--------YREEVHWMTHQPRVGRG 69

Query: 399 GFGPVYKGTLADEQE-IAVK--RLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG 455
            FG V++          AVK  RL     +       E++  + L    +V L G    G
Sbjct: 70  SFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGAVREG 122

Query: 456 EEKLLIY-EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRD 514
              + I+ E +   SL   I   ++   L   +  + +     GL YLH     RI+H D
Sbjct: 123 -PWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGD 175

Query: 515 LKASNVLLDQDMNP-KISDFGLAR---AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV 570
           +KA NVLL  D +   + DFG A      G  ++    + + GT  +MAPE         
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 235

Query: 571 KSDVFSFGILLLEIVSGK 588
           K D++S   ++L +++G 
Sbjct: 236 KVDIWSSCCMMLHMLNGC 253

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  135 bits (343), Expect = 2e-35
 Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 16/239 (6%)

Query: 354 ENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQ 412
           +        Q     +      L  +    +         K+GEG  G V         +
Sbjct: 12  DLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGR 71

Query: 413 EIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDS 472
           ++AVK +    +Q  + L NE+++    QH N+V++    + GEE  ++ EF+   +L  
Sbjct: 72  QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD 131

Query: 473 FIFDQERCKLLDWSKRFHI--IC-GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPK 529
            +    + +L        I  +C    + L YLH      +IHRD+K+ ++LL  D   K
Sbjct: 132 IV---SQVRL----NEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVK 181

Query: 530 ISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           +SDFG       D  +  +  +VGT  +MAPE  S   ++ + D++S GI+++E+V G+
Sbjct: 182 LSDFGFCAQISKDVPKRKS--LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  134 bits (340), Expect = 3e-35
 Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 13/217 (5%)

Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIIL 436
            +    +  + + I  +LG+G FG VYK          A K +   SE+ L++   EI +
Sbjct: 10  HVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEI 69

Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
            +   H  +VKLLG   H  +  ++ EF P  ++D+ +   E  + L   +   +     
Sbjct: 70  LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM--LELDRGLTEPQIQVVCRQML 127

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
             L +LH     RIIHRDLKA NVL+  + + +++DFG++      +T    +  +GT  
Sbjct: 128 EALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN--LKTLQKRDSFIGTPY 182

Query: 557 YMAPE-----YASDGQFSVKSDVFSFGILLLEIVSGK 588
           +MAPE        D  +  K+D++S GI L+E+   +
Sbjct: 183 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  133 bits (338), Expect = 4e-35
 Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRL-SKISEQGLKELKNEI-ILFSKLQHR 443
           D+     +LG G +G V K       +I AVKR+ + ++ Q  K L  ++ I    +   
Sbjct: 7   DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF------HIICGTAR 497
             V   G      +  +  E M + SLD F       +++D  +         I     +
Sbjct: 67  FTVTFYGALFREGDVWICMELM-DTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVK 120

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L +LH  S+L +IHRD+K SNVL++     K+ DFG++   G    +   +   G   Y
Sbjct: 121 ALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS---GYLVDDVAKDIDAGCKPY 175

Query: 558 MAPE----YASDGQFSVKSDVFSFGILLLEIVSGK 588
           MAPE      +   +SVKSD++S GI ++E+   +
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  135 bits (341), Expect = 6e-35
 Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 23/210 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLS-KISEQGLKELKNEIILFSKLQHRN 444
           D+F    +LG G  G V+K +      + A K +  +I      ++  E+ +  +     
Sbjct: 33  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF------HIICGTARG 498
           +V   G      E  +  E M   SLD         ++L  + R        +     +G
Sbjct: 93  IVGFYGAFYSDGEISICMEHMDGGSLD---------QVLKKAGRIPEQILGKVSIAVIKG 143

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L YL    + +I+HRD+K SN+L++     K+ DFG++      ++  N+   VGT  YM
Sbjct: 144 LTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSF--VGTRSYM 197

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           +PE      +SV+SD++S G+ L+E+  G+
Sbjct: 198 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  132 bits (335), Expect = 2e-34
 Identities = 48/222 (21%), Positives = 86/222 (38%), Gaps = 24/222 (10%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
            +   + ++  LG+G    V++G         A+K  + IS     +    E  +  KL 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 442 HRNLVKLLGCCIHGEEKLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           H+N+VKL                 EF P  SL + + +      L  S+   ++     G
Sbjct: 66  HKNIVKLFAI-EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 499 LLYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
           + +L +     I+HR++K  N++     D     K++DFG AR    DE       + GT
Sbjct: 125 MNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSLYGT 178

Query: 555 YGYMAPE--------YASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y+ P+             ++    D++S G+      +G 
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  133 bits (336), Expect = 2e-34
 Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 18/209 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKE-LKNEIILFSKLQH 442
             +   + LG+GGF   ++ +    ++  A K + K  + +   +E +  EI +   L H
Sbjct: 41  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 100

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--ICGTARGL 499
           +++V   G      + + ++ E    +SL      + R  L +   R+++  I     G 
Sbjct: 101 QHVVGFHGF-FEDNDFVFVVLELCRRRSLLELH--KRRKALTEPEARYYLRQIVL---GC 154

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH+    R+IHRDLK  N+ L++D+  KI DFGLA     D        + GT  Y+A
Sbjct: 155 QYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIA 209

Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE  S    S + DV+S G ++  ++ GK
Sbjct: 210 PEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  132 bits (334), Expect = 2e-34
 Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 11/208 (5%)

Query: 383 ANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKL 440
           A+  + F+  +K+G+G FG V+KG     ++ +A+K +  + +E  +++++ EI + S+ 
Sbjct: 18  ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
               + K  G  +   +  +I E++   S      D      LD ++   I+    +GL 
Sbjct: 78  DSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL----DLLEPGPLDETQIATILREILKGLD 133

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           YLH +   + IHRD+KA+NVLL +    K++DFG+A      +T+   N  VGT  +MAP
Sbjct: 134 YLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAP 188

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSGK 588
           E      +  K+D++S GI  +E+  G+
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGE 216

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  131 bits (332), Expect = 3e-34
 Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 18/209 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKE-LKNEIILFSKLQH 442
             +   + LG+GGF   ++ +    ++  A K + K  + +   +E +  EI +   L H
Sbjct: 15  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 74

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--ICGTARGL 499
           +++V   G      + + ++ E    +SL      + R  L +   R+++  I     G 
Sbjct: 75  QHVVGFHGF-FEDNDFVFVVLELCRRRSLLELH--KRRKALTEPEARYYLRQIVL---GC 128

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            YLH   R R+IHRDLK  N+ L++D+  KI DFGLA     D        + GT  Y+A
Sbjct: 129 QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGTPNYIA 183

Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE  S    S + DV+S G ++  ++ GK
Sbjct: 184 PEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  130 bits (330), Expect = 4e-34
 Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 13/207 (6%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKE-LKNEIILFSKLQH 442
           ++F +   LG+G F  VY+   +    E+A+K + K  + + G+ + ++NE+ +  +L+H
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
            ++++L          + L+ E   N  ++ ++  + R K    ++  H +     G+LY
Sbjct: 71  PSILELYNY-FEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQIITGMLY 127

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           LH      I+HRDL  SN+LL ++MN KI+DFGLA        +  T  + GT  Y++PE
Sbjct: 128 LH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPE 182

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGK 588
            A+     ++SDV+S G +   ++ G+
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGR 209

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  132 bits (334), Expect = 5e-34
 Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 19/223 (8%)

Query: 373 DLPLFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS---KISEQGLK 428
           D  + EL    +    FS  +++G G FG VY    + + + +A+K++S   K S +  +
Sbjct: 40  DPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ 99

Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
           ++  E+    KL+H N ++  GC +      L+ E+    + D     +   K L   + 
Sbjct: 100 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD---LLEVHKKPLQEVEI 156

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
             +  G  +GL YLH      +IHRD+KA N+LL +    K+ DFG A          N+
Sbjct: 157 AAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA----SIMAPANS 209

Query: 549 NRVVGTYGYMAPE---YASDGQFSVKSDVFSFGILLLEIVSGK 588
              VGT  +MAPE      +GQ+  K DV+S GI  +E+   K
Sbjct: 210 --FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  130 bits (328), Expect = 2e-33
 Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 23/215 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRL-SKISEQGLKELKNEI-ILFSKLQHR 443
           ++     ++G G +G V K       +I AVKR+ S + E+  K+L  ++ ++       
Sbjct: 22  EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF------HIICGTAR 497
            +V+  G      +  +  E M + S D F                       I   T +
Sbjct: 82  YIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVL----DDVIPEEILGKITLATVK 136

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L +L     L+IIHRD+K SN+LLD+  N K+ DFG++      ++   T    G   Y
Sbjct: 137 ALNHLK--ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTR-DAGCRPY 191

Query: 558 MAPE----YASDGQFSVKSDVFSFGILLLEIVSGK 588
           MAPE     AS   + V+SDV+S GI L E+ +G+
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  131 bits (332), Expect = 2e-33
 Identities = 48/222 (21%), Positives = 86/222 (38%), Gaps = 24/222 (10%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
            +   + ++  LG+G    V++G         A+K  + IS     +    E  +  KL 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN 65

Query: 442 HRNLVKLLGCCIHGEEKLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           H+N+VKL                 EF P  SL + + +      L  S+   ++     G
Sbjct: 66  HKNIVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 499 LLYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
           + +L +     I+HR++K  N++     D     K++DFG AR    DE       + GT
Sbjct: 125 MNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---FVSLYGT 178

Query: 555 YGYMAPE--------YASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y+ P+             ++    D++S G+      +G 
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  128 bits (324), Expect = 3e-33
 Identities = 58/312 (18%), Positives = 113/312 (36%), Gaps = 58/312 (18%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKR--LSKISEQGLKELKNEIILFSKL-Q 441
           T  F   +K+G G FG V+K     D    A+KR           +    E+   + L Q
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 442 HRNLVKLLGCCIHGEEKLLIY-EFMPNKSLDSFIFDQER-CKLLDWSKRFHIICGTARGL 499
           H ++V+        +  +LI  E+    SL   I +  R       ++   ++    RGL
Sbjct: 70  HSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP-------------------KISDFGLARAFG 540
            Y+H      ++H D+K SN+ + +   P                   KI D G      
Sbjct: 129 RYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS 185

Query: 541 GDETEGNTNRVVGTYGYMAPE-YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
             + E       G   ++A E    +     K+D+F+  + ++     +       + ++
Sbjct: 186 SPQVE------EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP---LPRNGDQ 236

Query: 600 LNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM 659
            + IR       +G   ++       S    E+++      + +   PE R   PS + +
Sbjct: 237 WHEIR-------QGRLPRIPQVL---SQEFTELLK------VMIHPDPERR---PSAMAL 277

Query: 660 LGSEIVLPQPKQ 671
           +   ++L   ++
Sbjct: 278 VKHSVLLSASRK 289

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  129 bits (325), Expect = 4e-33
 Identities = 68/334 (20%), Positives = 117/334 (35%), Gaps = 90/334 (26%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQHRN 444
            +F   + +G GGFG V++     D+   A+KR+     E   +++  E+   +KL+H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 445 LVKLLGCCIHG----------------------------------EEKLL-------IYE 463
           +V+     +                                    + + +          
Sbjct: 66  IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125

Query: 464 FMPNKSLDSFIFDQ-ERCK---LLDWSKR------------FHIICGTARGLLYLHQDSR 507
            +   S   +++ Q + C+   L DW  R             HI    A  + +LH    
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS--- 182

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN----------RVVGTYGY 557
             ++HRDLK SN+    D   K+ DFGL  A   DE E                VGT  Y
Sbjct: 183 KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
           M+PE      +S K D+FS G++L E++       F     ++ +I     + N   P  
Sbjct: 243 MSPEQIHGNNYSHKVDIFSLGLILFELLY-----SFSTQMERVRIIT---DVRNLKFPLL 294

Query: 618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
                 +       +++        +   P +RP
Sbjct: 295 FT----QKYPQEHMMVQ------DMLSPSPTERP 318

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  129 bits (325), Expect = 5e-33
 Identities = 53/223 (23%), Positives = 86/223 (38%), Gaps = 23/223 (10%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNL 445
              + + L EGGF  VY+   +   +E A+KRL    E+  + +  E+    KL  H N+
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88

Query: 446 VKLLGCCI-------HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           V+              G+ + L+   +    L  F+   E    L       I   T R 
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR-------- 550
           + ++H+  +  IIHRDLK  N+LL      K+ DFG A           + +        
Sbjct: 149 VQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207

Query: 551 --VVGTYGYMAPE---YASDGQFSVKSDVFSFGILLLEIVSGK 588
                T  Y  PE     S+     K D+++ G +L  +   +
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  129 bits (325), Expect = 5e-33
 Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 20/225 (8%)

Query: 377 FELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEII 435
            +L+ + +    F + + +G G +G VYKG  +   Q  A+K +  ++    +E+K EI 
Sbjct: 14  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGDEEEEIKQEIN 72

Query: 436 LFSKL-QHRNLVKLLGCCIHG-----EEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
           +  K   HRN+    G  I       +++L L+ EF    S+   +    +   L     
Sbjct: 73  MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD-LIKNTKGNTLKEEWI 131

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
            +I     RGL +LHQ    ++IHRD+K  NVLL ++   K+ DFG++     D T G  
Sbjct: 132 AYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRR 186

Query: 549 NRVVGTYGYMAPE-----YASDGQFSVKSDVFSFGILLLEIVSGK 588
           N  +GT  +MAPE        D  +  KSD++S GI  +E+  G 
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  130 bits (328), Expect = 1e-32
 Identities = 59/282 (20%), Positives = 107/282 (37%), Gaps = 38/282 (13%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLV 446
           +F     LG G  G +    + D +++AVKR+     +       E+ L  +  +H N++
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILP---ECFSFADREVQLLRESDEHPNVI 81

Query: 447 KLLGCCIHGEEKLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           +        +++   Y   E     +L  ++  +++       +   ++  T  GL +LH
Sbjct: 82  RYFCTE---KDRQFQYIAIELCA-ATLQEYV--EQKDFAHLGLEPITLLQQTTSGLAHLH 135

Query: 504 QDSRLRIIHRDLKASNVLL-----DQDMNPKISDFGLARAFGGDETE-GNTNRVVGTYGY 557
               L I+HRDLK  N+L+        +   ISDFGL +            + V GT G+
Sbjct: 136 S---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192

Query: 558 MAPEY---ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM 614
           +APE          +   D+FS G +   ++S      F  S  +   I       +   
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS-HPFGKSLQRQANILLGACSLDCLH 251

Query: 615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSV 656
           P +  D   ++      +I         +   P+ RP    V
Sbjct: 252 PEKHEDVIARE------LIEK------MIAMDPQKRPSAKHV 281

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  132 bits (332), Expect = 3e-32
 Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 17/214 (7%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHR 443
              + + ++LG GGFG V +       +++A+K+  +      +E    EI +  KL H 
Sbjct: 13  CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72

Query: 444 NLVKLL------GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           N+V               +  LL  E+     L  ++   E C  L       ++   + 
Sbjct: 73  NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
            L YLH+    RIIHRDLK  N++L    Q +  KI D G A+     E        VGT
Sbjct: 133 ALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGT 186

Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y+APE     +++V  D +SFG L  E ++G 
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  124 bits (313), Expect = 7e-32
 Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 24/211 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSK--ISEQGLKE-LKNEIILFSK 439
           ++F I + LG+G FG VY   LA E      +A+K L K  + + G++  L+ E+ + S 
Sbjct: 9   EDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65

Query: 440 LQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           L+H N+++L G   H   ++ LI E+ P  ++   +   ++    D  +    I   A  
Sbjct: 66  LRHPNILRLYGY-FHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANA 121

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV-GTYGY 557
           L Y H     R+IHRD+K  N+LL      KI+DFG +          +    + GT  Y
Sbjct: 122 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV-----HAPSSRRTDLCGTLDY 173

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++S G+L  E + GK
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  125 bits (316), Expect = 1e-31
 Identities = 37/257 (14%), Positives = 75/257 (29%), Gaps = 25/257 (9%)

Query: 386 TDNFSINKKLGEGGFGPVYKGTLADE------QEIAVKRLSKISEQGLKELKNEIILFSK 439
           +    ++  LGEG F  VY+ T  D       Q+  +K     +          +     
Sbjct: 64  SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKP 123

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI--FDQERCKLLDWSKRFHIICGTAR 497
                 +K     +     +L+ E     +L + I  +     K++              
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLY 183

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLL-----------DQDMNPKISDFGLARAFGGDETEG 546
            +  +H      IIH D+K  N +L           D      + D G +          
Sbjct: 184 MIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT 240

Query: 547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA 606
                  T G+   E  S+  ++ + D F     +  ++ G        ++         
Sbjct: 241 IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM--KVKNEGGECKPEGL 298

Query: 607 WK-LWNEGMPSQLIDAC 622
           ++ L +  M ++     
Sbjct: 299 FRRLPHLDMWNEFFHVM 315

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  125 bits (316), Expect = 1e-31
 Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 41/246 (16%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADE--QEIAVKRLSK-----------------ISEQGL 427
           +++ I + L +G F  +    L ++  +  A+K+  K                   +   
Sbjct: 31  NDYRIIRTLNQGKFNKII---LCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87

Query: 428 KELKNEIILFSKLQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWS 486
            + KNE+ + + +++   +   G  I   +++ +IYE+M N S+  F          +++
Sbjct: 88  DDFKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYT 145

Query: 487 KRF------HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG 540
                     II        Y+H  +   I HRD+K SN+L+D++   K+SDFG +    
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM- 202

Query: 541 GDETEGNTNRVVGTYGYMAPE-YASDGQFS-VKSDVFSFGILLLEIVSGKKNRGFYHSDN 598
               +       GTY +M PE ++++  ++  K D++S GI L  +        F    +
Sbjct: 203 ---VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP--FSLKIS 257

Query: 599 KLNLIR 604
            + L  
Sbjct: 258 LVELFN 263

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  124 bits (313), Expect = 1e-31
 Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 16/210 (7%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRL-SKISEQGLKELKNEI-ILFSKLQHR 443
           ++     ++G G  G V+K         IAVK++    +++  K +  ++ ++       
Sbjct: 25  NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
            +V+  G  I   +  +  E M     +     +     +       +     + L YL 
Sbjct: 85  YIVQCFGTFITNTDVFIAMELM-GTCAEKLK--KRMQGPIPERILGKMTVAIVKALYYLK 141

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-- 561
              +  +IHRD+K SN+LLD+    K+ DFG++   G    +   +R  G   YMAPE  
Sbjct: 142 --EKHGVIHRDVKPSNILLDERGQIKLCDFGIS---GRLVDDKAKDRSAGCAAYMAPERI 196

Query: 562 ---YASDGQFSVKSDVFSFGILLLEIVSGK 588
                +   + +++DV+S GI L+E+ +G+
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  125 bits (314), Expect = 4e-31
 Identities = 43/225 (19%), Positives = 80/225 (35%), Gaps = 22/225 (9%)

Query: 379 LATIANATDNFSINKKLGEG--GFGPVYKGT-LADEQEIAVKR--LSKISEQGLKELKNE 433
           +++       + +   +G+G      V         + + V+R  L   S + +  L+ E
Sbjct: 17  MSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE 76

Query: 434 IILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI-- 491
           + +     H N+V      I   E  ++  FM   S    I       +        I  
Sbjct: 77  LHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGM----NELAIAY 132

Query: 492 IC-GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-- 548
           I  G  + L Y+H       +HR +KAS++L+  D    +S      +            
Sbjct: 133 ILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVH 189

Query: 549 ---NRVVGTYGYMAPE--YASDGQFSVKSDVFSFGILLLEIVSGK 588
                 V    +++PE    +   +  KSD++S GI   E+ +G 
Sbjct: 190 DFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH 234

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  121 bits (306), Expect = 1e-30
 Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 14/216 (6%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLS-KISEQGLKELKNEIILFSKLQ 441
              D++ + + +G G    V        ++++A+KR++ +  +  + EL  EI   S+  
Sbjct: 12  INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFHIICGTA 496
           H N+V      +  +E  L+ + +   S+           + +  +LD S    I+    
Sbjct: 72  HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL-ARAFGGDETEGNTNR--VVG 553
            GL YLH++     IHRD+KA N+LL +D + +I+DFG+ A    G +   N  R   VG
Sbjct: 132 EGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188

Query: 554 TYGYMAPE-YASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  +MAPE       +  K+D++SFGI  +E+ +G 
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  120 bits (302), Expect = 3e-30
 Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 25/209 (11%)

Query: 391 INKKLGEGGFGPVYKGTLADEQ---EIAVKRLS---KISEQGLKELKNEIILFSKLQHRN 444
           I  KLG GG   VY     D     ++A+K +    +  E+ LK  + E+   S+L H+N
Sbjct: 15  IVDKLGGGGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72

Query: 445 LVKLLGCCIH--GEEKLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +V      +    EE    Y   E++   +L  +I        L      +       G+
Sbjct: 73  IVS-----MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGI 124

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            + H    +RI+HRD+K  N+L+D +   KI DFG+A+A   + +   TN V+GT  Y +
Sbjct: 125 KHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTVQYFS 180

Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE A        +D++S GI+L E++ G+
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  117 bits (296), Expect = 1e-29
 Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 24/211 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADE----QEIAVKRLSK--ISEQGLKE-LKNEIILFSK 439
           D+F I + LG+G FG VY   LA E      +A+K L K  + ++G++  L+ EI + S 
Sbjct: 14  DDFDIGRPLGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH 70

Query: 440 LQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           L+H N++++     H  +++ L+ EF P   L   +  Q+  +  +       +   A  
Sbjct: 71  LRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSAT-FMEELADA 126

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-TNRVVGTYGY 557
           L Y H     ++IHRD+K  N+L+      KI+DFG +               + GT  Y
Sbjct: 127 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSV-----HAPSLRRRTMCGTLDY 178

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           + PE         K D++  G+L  E + G 
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  118 bits (297), Expect = 2e-29
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 25/209 (11%)

Query: 391 INKKLGEGGFGPVYKGTLADEQ---EIAVKRLSK--ISEQGLKE-LKNEIILFSKLQHRN 444
           + + +G GG G VY+    D      +A+K +S+   S+   +  ++ E     +LQ  +
Sbjct: 38  LRRLVGRGGMGDVYEAE--DTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPH 95

Query: 445 LVKLLGCCIH--GEEKLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           +V      IH  GE    +Y     +    L + +  Q     L   +   I+      L
Sbjct: 96  VVP-----IHDFGEIDGQLYVDMRLINGVDLAAMLRRQGP---LAPPRAVAIVRQIGSAL 147

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
              H        HRD+K  N+L+  D    + DFG+A A   DE        VGT  YMA
Sbjct: 148 DAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASA-TTDEKLTQLGNTVGTLYYMA 203

Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           PE  S+   + ++D+++   +L E ++G 
Sbjct: 204 PERFSESHATYRADIYALTCVLYECLTGS 232

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  121 bits (305), Expect = 3e-29
 Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 42/265 (15%)

Query: 353 RENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGT-LADE 411
             + ++ G E      ++     +F  +   + ++ +   KKLG G +G V         
Sbjct: 3   HHHHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTH 62

Query: 412 QEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKS 469
            E A+K + K  +S     +L  E+ +   L H N++KL       E+K   Y  M    
Sbjct: 63  VERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF---EDKRNYYLVM---- 115

Query: 470 LDSFIFDQERCK---LLDW---SKRF------HIICGTARGLLYLHQDSRLRIIHRDLKA 517
                   E  K   L D      +F       II     G+ YLH+     I+HRDLK 
Sbjct: 116 --------ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKP 164

Query: 518 SNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDV 574
            N+LL   ++D   KI DFGL+  F   +        +GT  Y+APE     ++  K DV
Sbjct: 165 ENLLLESKEKDALIKIVDFGLSAVFENQKK---MKERLGTAYYIAPE-VLRKKYDEKCDV 220

Query: 575 FSFGILLLEIVSGKKNRGFYHSDNK 599
           +S G++L  +++G     F    ++
Sbjct: 221 WSIGVILFILLAGY--PPFGGQTDQ 243

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  117 bits (295), Expect = 7e-29
 Identities = 33/314 (10%), Positives = 69/314 (21%), Gaps = 51/314 (16%)

Query: 373 DLPLFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK---ISEQGLK 428
           +      + ++       + + L  G    V+    +   ++ A+K  +     S   L+
Sbjct: 48  NAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELE 107

Query: 429 ELKNEIILFSKLQHRNLVKLLGCC--------------------------IHGEEKLLIY 462
            L       ++L   +  +                                     LL+ 
Sbjct: 108 RLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLM 167

Query: 463 EFMP---NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASN 519
                       +  F               +     R    L       ++H      N
Sbjct: 168 PAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDN 224

Query: 520 VLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY--ASDGQFSVKSDVFSF 577
           + +  D    + D       G                Y   E+  AS   F+   + +  
Sbjct: 225 LFIMPDGRLMLGDVSALWKVGTRGPA-----SSVPVTYAPREFLNASTATFTHALNAWQL 279

Query: 578 GILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIH 637
           G+ +  +        F      +        L   G  S    +C      +  +I    
Sbjct: 280 GLSIYRVWCLF--LPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIG--- 334

Query: 638 IGLLCVQQYPEDRP 651
              L        R 
Sbjct: 335 -RFLNFD--RRRRL 345

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  118 bits (297), Expect = 1e-28
 Identities = 57/229 (24%), Positives = 89/229 (38%), Gaps = 36/229 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEI-ILFSKLQHRNL 445
           +     K LG G  G V        + +AVKR+             EI +L     H N+
Sbjct: 15  NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNV 71

Query: 446 VKLLGCCIHGEEKL-LIYEFMPNKSLDSFI----FDQERCKLLDWSKRFHIICGTARGLL 500
           ++   C    +  L +  E   N +L   +       E  KL        ++   A G+ 
Sbjct: 72  IRYY-CSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129

Query: 501 YLHQDSRLRIIHRDLKASNVLLD-------------QDMNPKISDFGLARAFGGDET--E 545
           +LH    L+IIHRDLK  N+L+              +++   ISDFGL +     ++   
Sbjct: 130 HLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186

Query: 546 GNTNRVVGTYGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSG 587
            N N   GT G+ APE         +  + +   D+FS G +   I+S 
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  117 bits (295), Expect = 2e-28
 Identities = 49/390 (12%), Positives = 95/390 (24%), Gaps = 70/390 (17%)

Query: 353 RENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGT-LADE 411
                    +        +   P    + +            LG+       + T     
Sbjct: 44  TSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETG 103

Query: 412 QEIAVKRLSK---ISEQGLKELKNEIILFSKLQ----------------------HRNLV 446
           +   V             +K++K E++    L+                           
Sbjct: 104 ESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKK 163

Query: 447 KLLGCCIHGEEKLLIYEF--MPNKSLDSFIF------DQERCKLLDWSKRFHIICGTARG 498
           K++   +   +  ++  F   P    +   F           K L    R  +     R 
Sbjct: 164 KMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL 223

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           L  LH      ++H  L+  +++LDQ     ++ F       G        R        
Sbjct: 224 LASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD-GASAVSPIGRGFAPPETT 279

Query: 559 APE-----YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG 613
           A              +   D ++ G+ +  I                             
Sbjct: 280 AERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LPNTDDA---------------- 321

Query: 614 MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQ--PKQ 671
                 +  F+   N+ + +R +  G L      EDR      +     E +  +     
Sbjct: 322 -ALGGSEWIFRSCKNIPQPVRALLEGFLRYP--KEDRLLPLQAMETPEYEQLRTELSAAL 378

Query: 672 PGYLADRKSTRLD----SSLSMPESSSTNT 697
           P Y  D + TR      S  S P+ +    
Sbjct: 379 PLYQTDGEPTREGGAPPSGTSQPDEAGAAE 408

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  115 bits (289), Expect = 2e-28
 Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 28/215 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V            A+K L K   I E  +  +  E  + S+L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFH---IIC 493
              VKL       +EKL     +  N  L  +I     FD+          RF+   I+ 
Sbjct: 90  PFFVKLYFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-------RFYTAEIVS 141

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
                L YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VG
Sbjct: 142 A----LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 194

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  Y++PE  ++      SD+++ G ++ ++V+G 
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  113 bits (286), Expect = 6e-28
 Identities = 70/221 (31%), Positives = 114/221 (51%), Gaps = 32/221 (14%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQG-----LKELKNEIILF 437
           +++  F   +KLG G +  VYKG        +A+K +   SE+G     ++E    I L 
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIRE----ISLM 57

Query: 438 SKLQHRNLVKLLGCCIHGEEKL-LIYEFMPN--KSLDSFIFDQERCKLLDWSKRFHIICG 494
            +L+H N+V+L    IH E KL L++EFM N  K            + L+ +   +    
Sbjct: 58  KELKHENIVRLY-DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
             +GL + H++   +I+HRDLK  N+L+++    K+ DFGLARAF G      ++ VV T
Sbjct: 117 LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTFSSEVV-T 171

Query: 555 YGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y AP+       Y++    S+  D++S G +L E+++GK
Sbjct: 172 LWYRAPDVLMGSRTYST----SI--DIWSCGCILAEMITGK 206

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  117 bits (294), Expect = 8e-28
 Identities = 63/264 (23%), Positives = 108/264 (40%), Gaps = 51/264 (19%)

Query: 353 RENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGT-LADE 411
             + ++    +    Q I ++  ++         +++   +KLG G +G V         
Sbjct: 2   HHHHHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGH 61

Query: 412 QEIAVKRLSK-------------ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK 458
            E A+K + K               E+  +E+ NEI L   L H N++KL       E+K
Sbjct: 62  SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF---EDK 118

Query: 459 LLIYEFMPNKSLDSFIFDQERCK---LLDW---SKRF------HIICGTARGLLYLHQDS 506
              Y               E  +   L +      +F      +I+     G+ YLH+  
Sbjct: 119 KYFYLVT------------EFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK-- 164

Query: 507 RLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
              I+HRD+K  N+LL   +  +N KI DFGL+  F  D         +GT  Y+APE  
Sbjct: 165 -HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPE-V 219

Query: 564 SDGQFSVKSDVFSFGILLLEIVSG 587
              +++ K DV+S G+++  ++ G
Sbjct: 220 LKKKYNEKCDVWSCGVIMYILLCG 243

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  113 bits (286), Expect = 8e-28
 Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 43/221 (19%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQG-----LKELKNEIILFSKL 440
           + +    KLGEG +  VYKG       + A+K +    E+G     ++E+     L   L
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVS----LLKDL 57

Query: 441 QHRNLVKLLGCCIHGEEKL-LIYEFMPN---KSLDS--FIFDQERCKLLDWSKRFHIICG 494
           +H N+V L    IH E+ L L++E++     + LD    I +    KL  +         
Sbjct: 58  KHANIVTLH-DIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQ-------- 108

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
             RGL Y H+    +++HRDLK  N+L+++    K++DFGLARA     T+   N VV T
Sbjct: 109 LLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAK-SIPTKTYDNEVV-T 163

Query: 555 YGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y  P+       Y      S + D++  G +  E+ +G+
Sbjct: 164 LWYRPPDILLGSTDY------STQIDMWGVGCIFYEMATGR 198

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  113 bits (285), Expect = 8e-28
 Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 42/221 (19%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKN-----EIILFSKL 440
           + +    K+GEG +G V+K    D  +I A+K   K  E     +       EI +  +L
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIK---KFLESEDDPVIKKIALREIRMLKQL 59

Query: 441 QHRNLVKLLGCCIHGEEKL-LIYEFMPN---KSLDSF--IFDQERCKLLDWSKRFHIICG 494
           +H NLV LL      + +L L++E+  +     LD +     +   K + W         
Sbjct: 60  KHPNLVNLL-EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ-------- 110

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
           T + + + H+      IHRD+K  N+L+ +    K+ DFG AR      ++   + V  T
Sbjct: 111 TLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVA-T 165

Query: 555 YGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y +PE       Y       V  DV++ G +  E++SG 
Sbjct: 166 RWYRSPELLVGDTQYGP----PV--DVWAIGCVFAELLSGV 200

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  113 bits (285), Expect = 9e-28
 Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 43/221 (19%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQ------GLKELKNEIILFSKL 440
           + +   +K+GEG +G VYK   +  + +A+KR+   +E        ++E    I L  +L
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE----ISLLKEL 76

Query: 441 QHRNLVKLLGCCIHGEEKL-LIYEFMPN---KSLDSF--IFDQERCKLLDWSKRFHIICG 494
            H N+V L+   IH E  L L++EFM     K LD         + K+       + +  
Sbjct: 77  HHPNIVSLI-DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIY-----LYQLL- 129

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
             RG+ + HQ    RI+HRDLK  N+L++ D   K++DFGLARAF G      T+ VV T
Sbjct: 130 --RGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV-T 182

Query: 555 YGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y AP+       Y++    SV  D++S G +  E+++GK
Sbjct: 183 LWYRAPDVLMGSKKYST----SV--DIWSIGCIFAEMITGK 217

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  116 bits (292), Expect = 1e-27
 Identities = 68/221 (30%), Positives = 98/221 (44%), Gaps = 41/221 (18%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQ 441
           +D +   + LG+G FG V         QE AVK +SK     +   + L  E+ L  +L 
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDW---SKRF------ 489
           H N++KL       E+K   Y               E      L D     KRF      
Sbjct: 85  HPNIMKLYEFF---EDKGYFYLVG------------EVYTGGELFDEIISRKRFSEVDAA 129

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEG 546
            II     G+ Y+H+    +I+HRDLK  N+LL    +D N +I DFGL+  F   +   
Sbjct: 130 RIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-- 184

Query: 547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
                +GT  Y+APE    G +  K DV+S G++L  ++SG
Sbjct: 185 -MKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  112 bits (283), Expect = 2e-27
 Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 23/211 (10%)

Query: 391 INKKLGEGGFGPVYKGTLADEQ---EIAVK----RLSKISEQGLKELKNEIILFSKLQHR 443
           + + LG GG   V+     D +   ++AVK     L++         + E    + L H 
Sbjct: 16  LGEILGFGGMSEVHLAR--DLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHP 72

Query: 444 NLVKLL--GCCIHGEEKLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
            +V +   G         L Y   E++   +L   +  +     +   +   +I    + 
Sbjct: 73  AIVAVYDTGE-AETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQA 128

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE-TEGNTNRVVGTYGY 557
           L + H   +  IIHRD+K +N+++      K+ DFG+ARA      +   T  V+GT  Y
Sbjct: 129 LNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           ++PE A       +SDV+S G +L E+++G+
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  113 bits (285), Expect = 2e-27
 Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 29/216 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN-----EIILFSKL 440
             +     LGEG F  VYK       Q +A+K++        K+  N     EI L  +L
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69

Query: 441 QHRNLVKLLGCCIHGEEKL-LIYEFMPN---KSLDS--FIFDQERCKLLDWSKRFHIICG 494
            H N++ LL      +  + L+++FM       +     +      K             
Sbjct: 70  SHPNIIGLLDA-FGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM-------- 120

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
           T +GL YLHQ     I+HRDLK +N+LLD++   K++DFGLA++F G      T++VV T
Sbjct: 121 TLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYTHQVV-T 175

Query: 555 YGYMAPE--YASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y APE  + +   + V  D+++ G +L E++   
Sbjct: 176 RWYRAPELLFGAR-MYGVGVDMWAVGCILAELLLRV 210

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  116 bits (292), Expect = 2e-27
 Identities = 66/219 (30%), Positives = 98/219 (44%), Gaps = 34/219 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           D F   + LG GGFG V+   +    ++ A K+L+K      +G +    E  + +K+  
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMP---------NKSLDSFIFDQERCKLLDWSKRF--- 489
           R +V L       +  L L+   M          N   D+  F + R         F   
Sbjct: 245 RFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA-------IFYTA 296

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN 549
            I+ G    L +LHQ     II+RDLK  NVLLD D N +ISD GLA      +T+  T 
Sbjct: 297 QIVSG----LEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TK 347

Query: 550 RVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
              GT G+MAPE     ++    D F+ G+ L E+++ +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  115 bits (290), Expect = 2e-27
 Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 40/220 (18%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQH 442
            + ++I   LG+G FG V K      +QE AVK ++K     +    +  E+ L  KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDW---SKRF------H 490
            N++KL       E+    Y               E      L D     KRF       
Sbjct: 81  PNIMKLFEIL---EDSSSFYIVG------------ELYTGGELFDEIIKRKRFSEHDAAR 125

Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGN 547
           II     G+ Y+H+     I+HRDLK  N+LL   ++D + KI DFGL+  F  +     
Sbjct: 126 IIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--- 179

Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
               +GT  Y+APE    G +  K DV+S G++L  ++SG
Sbjct: 180 MKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  113 bits (286), Expect = 2e-27
 Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 40/222 (18%)

Query: 386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
              ++  K +G G FG V++  L +  E+A+K++ +      +EL+    +   ++H N+
Sbjct: 39  EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ----IMRIVKHPNV 94

Query: 446 VKLLGCCIH------GEEKL-LIYEFMP---NKSLDSF-----IFDQERCKLLDWSKRFH 490
           V L     +       E  L L+ E++P    ++   +            KL      + 
Sbjct: 95  VDLK-AFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY----MYQ 149

Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTN 549
           ++    R L Y+H    + I HRD+K  N+LLD      K+ DFG A+       E N +
Sbjct: 150 LL----RSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL--IAGEPNVS 200

Query: 550 RVVGTYGYMAPEY---ASDGQFSVKSDVFSFGILLLEIVSGK 588
            +   Y Y APE    A+   ++   D++S G ++ E++ G+
Sbjct: 201 YICSRY-YRAPELIFGAT--NYTTNIDIWSTGCVMAELMQGQ 239

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  113 bits (284), Expect = 2e-27
 Identities = 30/241 (12%), Positives = 65/241 (26%), Gaps = 54/241 (22%)

Query: 393 KKLGEGGFGPVYKGT-LADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQ------- 441
             LG+       + T     +   V             +K++K E++    L+       
Sbjct: 79  TVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 138

Query: 442 ------------------HRNLVKLLGCCIHGEEK--LLIYEFMPNKSLDSF--IFD-QE 478
                              + ++++              +Y  M +        +     
Sbjct: 139 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSS 198

Query: 479 RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
             K L    R  +     R L  LH      ++H  L+  +++LDQ     ++ F     
Sbjct: 199 THKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVR 255

Query: 539 FGGDETEGNTNRVVGTYGYMAPEYASD-----------GQFSVKSDVFSFGILLLEIVSG 587
            G             + G+  PE  +               +   D ++ G+++  I   
Sbjct: 256 DGARVV------SSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309

Query: 588 K 588
            
Sbjct: 310 D 310

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  110 bits (278), Expect = 4e-27
 Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 31/188 (16%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQ------GLKELKNEIILFSK 439
             +   +K+GEG +G V+K       + +A+KR+    +        L+E+     L  +
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC----LLKE 57

Query: 440 LQHRNLVKLLGCCIHGEEKL-LIYEFMPN---KSLDS--FIFDQERCKLLDWSKRFHIIC 493
           L+H+N+V+L    +H ++KL L++EF      K  DS     D E  K          + 
Sbjct: 58  LKHKNIVRLH-DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF-----LFQLL 111

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
              +GL + H      ++HRDLK  N+L++++   K+++FGLARAF G      +  VV 
Sbjct: 112 ---KGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVV- 163

Query: 554 TYGYMAPE 561
           T  Y  P+
Sbjct: 164 TLWYRPPD 171

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  115 bits (290), Expect = 6e-27
 Identities = 38/211 (18%), Positives = 79/211 (37%), Gaps = 34/211 (16%)

Query: 391 INKKLGEGGFGPVYKG--TLADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHRNLVK 447
           +   +  GG G +Y       + + + +K L    +   +     E    +++ H ++V+
Sbjct: 84  VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQ 143

Query: 448 LLGCCIH--GEE-----KLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
                I    E        + Y   E++  +SL       ++   L  ++    +     
Sbjct: 144 -----IFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--GQK---LPVAEAIAYLLEILP 193

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            L YLH    + +++ DLK  N++L ++   K+ D G                + GT G+
Sbjct: 194 ALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS------FGYLYGTPGF 243

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            APE       +V +D+++ G  L  +    
Sbjct: 244 QAPEIVR-TGPTVATDIYTVGRTLAALTLDL 273

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  110 bits (277), Expect = 6e-27
 Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 43/221 (19%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKE------LKNEIILFSKL 440
           + +   +K+GEG +G VYK      +  A+K++    E    E      ++ EI +  +L
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIR-EISILKEL 57

Query: 441 QHRNLVKLLGCCIHGEEKL-LIYEFMPN---KSLDS--FIFDQERCKLLDWSKRFHIICG 494
           +H N+VKL    IH +++L L++E +     K LD      +    K             
Sbjct: 58  KHSNIVKLY-DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ-------- 108

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
              G+ Y H     R++HRDLK  N+L++++   KI+DFGLARAF G      T+ +V T
Sbjct: 109 LLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-T 163

Query: 555 YGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y AP+       Y++    ++  D++S G +  E+V+G 
Sbjct: 164 LWYRAPDVLMGSKKYST----TI--DIWSVGCIFAEMVNGT 198

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  114 bits (287), Expect = 9e-27
 Identities = 65/217 (29%), Positives = 96/217 (44%), Gaps = 33/217 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           + F   + LG+GGFG V    +    ++ A K+L K      +G     NE  +  K+  
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSL-------DSFIFDQERCKLLDWSKRF---HI 491
           R +V L       ++ L L+   M    L           F + R         F    I
Sbjct: 244 RFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA-------VFYAAEI 295

Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
            CG    L  LH   R RI++RDLK  N+LLD   + +ISD GLA      +T       
Sbjct: 296 CCG----LEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGR 345

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           VGT GYMAPE   + +++   D ++ G LL E+++G+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  109 bits (274), Expect = 1e-26
 Identities = 67/218 (30%), Positives = 94/218 (43%), Gaps = 44/218 (20%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQH 442
            + ++I   LG+G FG V K      +QE AVK ++K     +    +  E+ L  KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDW---SKRF------H 490
            N++KL       E+    Y               E      L D     KRF       
Sbjct: 81  PNIMKLFEIL---EDSSSFYIVG------------ELYTGGELFDEIIKRKRFSEHDAAR 125

Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGN 547
           II     G+ Y+H+     I+HRDLK  N+LL   ++D + KI DFGL+  F  +     
Sbjct: 126 IIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--- 179

Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFG----ILL 581
               +GT  Y+APE    G +  K DV+S G    ILL
Sbjct: 180 MKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILL 216

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  110 bits (277), Expect = 1e-26
 Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 42/221 (19%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKN-----EIILFSKL 440
           + +     +GEG +G V K    D   I A+K   K  E    ++       EI L  +L
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK---KFLESDDDKMVKKIAMREIKLLKQL 81

Query: 441 QHRNLVKLLGCCIHGEEKL-LIYEFMPN---KSLDSF--IFDQERCKLLDWSKRFHIICG 494
           +H NLV LL      +++  L++EF+ +     L+ F    D +  +   +         
Sbjct: 82  RHENLVNLL-EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQ-------- 132

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
              G+ + H      IIHRD+K  N+L+ Q    K+ DFG AR       E   + V  T
Sbjct: 133 IINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVA-T 187

Query: 555 YGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y APE       Y      +V  DV++ G L+ E+  G+
Sbjct: 188 RWYRAPELLVGDVKYGK----AV--DVWAIGCLVTEMFMGE 222

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  114 bits (286), Expect = 2e-26
 Identities = 69/221 (31%), Positives = 103/221 (46%), Gaps = 40/221 (18%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNE-IIL--FSK 439
           ++FS+++ +G GGFG VY    AD  ++ A+K L K     +QG     NE I+L   S 
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248

Query: 440 LQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFH--- 490
                +V +     H  +KL  I + M    L   +     F +          RF+   
Sbjct: 249 GDCPFIVCM-SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-------RFYAAE 300

Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR 550
           II G    L ++H      +++RDLK +N+LLD+  + +ISD GLA  F   +       
Sbjct: 301 IILG----LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA---- 349

Query: 551 VVGTYGYMAPEYASDGQ---FSVKSDVFSFGILLLEIVSGK 588
            VGT+GYMAPE    G     S   D FS G +L +++ G 
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSA--DWFSLGCMLFKLLRGH 388

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  109 bits (273), Expect = 4e-26
 Identities = 56/259 (21%), Positives = 92/259 (35%), Gaps = 67/259 (25%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--------ISEQGLKELKNEIILFS 438
            +S    LG G FG V+        +E+ VK + K        I +  L ++  EI + S
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 439 KLQHRNLVKLLGCCIHGEEKLLIYEFMPNKS--------------LDSFIFDQERCKLLD 484
           +++H N++K+              +   N+               L +FI    R     
Sbjct: 85  RVEHANIIKV-------------LDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPL 131

Query: 485 WSKRFH-IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
            S  F  ++        YL       IIHRD+K  N+++ +D   K+ DFG A      E
Sbjct: 132 ASYIFRQLVSAVG----YLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---E 181

Query: 544 TEGNTNRVVGTYGYMAPEYAS----DGQFSVKSDVFSFGILLLEIVSG--------KKNR 591
                    GT  Y APE        G    + +++S G+ L  +V          +   
Sbjct: 182 RGKLFYTFCGTIEYCAPEVLMGNPYRGP---ELEMWSLGVTLYTLVFEENPFCELEETVE 238

Query: 592 GFYH-----SDNKLNLIRH 605
              H     S   ++L+  
Sbjct: 239 AAIHPPYLVSKELMSLVSG 257

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  111 bits (279), Expect = 7e-26
 Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 25/241 (10%)

Query: 353 RENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFS----INKKLGEGGFGPVYKGT- 407
            +    +GT   N D  +      +    +    D+      I+++LG G FG V++ T 
Sbjct: 119 GKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTE 178

Query: 408 LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN 467
            A     A K +    E   + ++ EI   S L+H  LV L        E ++IYEFM  
Sbjct: 179 RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 238

Query: 468 KSLDSFIFD---QERCKL--LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL 522
             L    F+    E  K+   +  +    +C    GL ++H+      +H DLK  N++ 
Sbjct: 239 GEL----FEKVADEHNKMSEDEAVEYMRQVCK---GLCHMHE---NNYVHLDLKPENIMF 288

Query: 523 DQDMNP--KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGIL 580
               +   K+ DFGL       +   +     GT  + APE A        +D++S G+L
Sbjct: 289 TTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345

Query: 581 L 581
            
Sbjct: 346 S 346

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  106 bits (267), Expect = 8e-26
 Identities = 71/251 (28%), Positives = 104/251 (41%), Gaps = 45/251 (17%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHRN 444
           +++ + + LGEG +G V        E+ +AVK +         E +K EI +   L H N
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66

Query: 445 LVKLLGCCIHGEEKLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFH-IICGTARGLL 500
           +VK  G   H  E  + Y   E+     L   I         D  + FH ++ G      
Sbjct: 67  VVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           YLH    + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176

Query: 561 EYAS----DGQFSVKSDVFSFGILLLEIVSG----------------KKNRGFYH----- 595
           E         +     DV+S GI+L  +++G                 K +  Y      
Sbjct: 177 ELLKRREFHAE---PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKK 233

Query: 596 -SDNKLNLIRH 605
                L L+  
Sbjct: 234 IDSAPLALLHK 244

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  108 bits (271), Expect = 8e-26
 Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 23/210 (10%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRL--SKISEQGLKELKNEIILFSKLQHRN 444
           N+ + K +G+G F  V     +   +E+A+K +  ++++   L++L  E+ +   L H N
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75

Query: 445 LVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFH-IICGTARGLLYL 502
           +VKL    I  E+ L LI E+     +  ++    R K  +   +F  I+        Y 
Sbjct: 76  IVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----YC 130

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H   + RI+HRDLKA N+LLD DMN KI+DFG +  F         +   G   Y APE 
Sbjct: 131 H---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---DAFCGAPPYAAPEL 184

Query: 563 AS----DGQFSVKSDVFSFGILLLEIVSGK 588
                 DG    + DV+S G++L  +VSG 
Sbjct: 185 FQGKKYDGP---EVDVWSLGVILYTLVSGS 211

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  107 bits (270), Expect = 9e-26
 Identities = 65/228 (28%), Positives = 100/228 (43%), Gaps = 52/228 (22%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE------LKNEIILFSK 439
           D +    KLGEG +G VYK       + +A+KR+    E   +E      ++ E+ L  +
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE---EEGVPGTAIR-EVSLLKE 89

Query: 440 LQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRF---HIICGT 495
           LQHRN+++L    IH   +L LI+E+           + +  K +D +       I    
Sbjct: 90  LQHRNIIELK-SVIHHNHRLHLIFEYA----------ENDLKKYMDKNPDVSMRVIKSFL 138

Query: 496 A---RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP-----KISDFGLARAFGGDETEGN 547
                G+ + H     R +HRDLK  N+LL           KI DFGLARAF G      
Sbjct: 139 YQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQF 194

Query: 548 TNRVVGTYGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
           T+ ++ T  Y  PE       Y++    SV  D++S   +  E++   
Sbjct: 195 THEII-TLWYRPPEILLGSRHYST----SV--DIWSIACIWAEMLMKT 235

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  106 bits (267), Expect = 1e-25
 Identities = 50/215 (23%), Positives = 83/215 (38%), Gaps = 38/215 (17%)

Query: 383 ANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
            +    +++   +G G +G V            A K++ K   + +   K EI +   L 
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDW---SKRF------ 489
           H N+++L       E+   IY  M            E C    L +     + F      
Sbjct: 65  HPNIIRLYETF---EDNTDIYLVM------------ELCTGGELFERVVHKRVFRESDAA 109

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEG 546
            I+      + Y H+   L + HRDLK  N L      D   K+ DFGLA  F   +   
Sbjct: 110 RIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-- 164

Query: 547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
                VGT  Y++P+   +G +  + D +S G+++
Sbjct: 165 -MRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMM 197

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  106 bits (268), Expect = 1e-25
 Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 30/218 (13%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK----ISEQGLKELKNEIILFSKLQH 442
            + +   LGEG +G V +          AVK L K        G   +K EI L  +L+H
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65

Query: 443 RNLVKLLGCCIHGEEKLLIY---EFMPNKSLDSFIFD---QERCKLLDWSKRFH-IICGT 495
           +N+++L+   ++ EEK  +Y   E+      +  + D   ++R  +      F  +I G 
Sbjct: 66  KNVIQLVDV-LYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHGYFCQLIDGL 122

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
                YLH      I+H+D+K  N+LL      KIS  G+A A      +       G+ 
Sbjct: 123 E----YLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175

Query: 556 GYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGK 588
            +  PE A+      G    K D++S G+ L  I +G 
Sbjct: 176 AFQPPEIANGLDTFSGF---KVDIWSAGVTLYNITTGL 210

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  107 bits (269), Expect = 3e-25
 Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 21/207 (10%)

Query: 383 ANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ 441
            +  D + I ++LG G FG V++    A  +    K ++         +KNEI + ++L 
Sbjct: 47  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH 106

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD---QERCKL--LDWSKRFHIICGTA 496
           H  L+ L        E +LI EF+    L    FD    E  K+   +        C   
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVINYMRQACE-- 160

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTNRVVGT 554
            GL ++H+     I+H D+K  N++ +       KI DFGLA     DE          T
Sbjct: 161 -GLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTAT 213

Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILL 581
             + APE          +D+++ G+L 
Sbjct: 214 AEFAAPEIVDREPVGFYTDMWAIGVLG 240

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  106 bits (266), Expect = 3e-25
 Identities = 71/251 (28%), Positives = 104/251 (41%), Gaps = 45/251 (17%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHRN 444
           +++ + + LGEG +G V        E+ +AVK +         E +K EI +   L H N
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66

Query: 445 LVKLLGCCIHGEEKLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRFH-IICGTARGLL 500
           +VK  G   H  E  + Y   E+     L   I         D  + FH ++ G      
Sbjct: 67  VVKFYG---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           YLH    + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176

Query: 561 EYAS----DGQFSVKSDVFSFGILLLEIVSG----------------KKNRGFYH----- 595
           E         +     DV+S GI+L  +++G                 K +  Y      
Sbjct: 177 ELLKRREFHAE---PVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKK 233

Query: 596 -SDNKLNLIRH 605
                L L+  
Sbjct: 234 IDSAPLALLHK 244

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  104 bits (263), Expect = 5e-25
 Identities = 55/216 (25%), Positives = 83/216 (38%), Gaps = 42/216 (19%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN 444
              F   + LG G F  V+        +  A+K + K        L+NEI +  K++H N
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDW---SKRF------HII 492
           +V L       E     Y  M            +      L D       +       +I
Sbjct: 68  IVTLEDIY---ESTTHYYLVM------------QLVSGGELFDRILERGVYTEKDASLVI 112

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTN 549
                 + YLH+     I+HRDLK  N+L    +++    I+DFGL++        G  +
Sbjct: 113 QQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ----NGIMS 165

Query: 550 RVVGTYGYMAPEYASDGQFSVKSDVFSFG----ILL 581
              GT GY+APE  +   +S   D +S G    ILL
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  106 bits (266), Expect = 5e-25
 Identities = 54/264 (20%), Positives = 93/264 (35%), Gaps = 51/264 (19%)

Query: 349 ARYFRENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGT- 407
           A   + N       +    Q++  +  L + A        +     +G G    V +   
Sbjct: 56  AEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVH 115

Query: 408 LADEQEIAVKRLSK--------ISEQGLKELKNEI-ILFSKLQHRNLVKLLGCCIHGEEK 458
            A   E AVK +            E+  +  + E  IL     H +++ L+      E  
Sbjct: 116 RATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY---ESS 172

Query: 459 LLIY---EFMPNKSLDSFIFD--------QERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
             ++   + M    L    FD         E+    +       +      + +LH    
Sbjct: 173 SFMFLVFDLMRKGEL----FDYLTEKVALSEK----ETRSIMRSLLE---AVSFLHA--- 218

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE------ 561
             I+HRDLK  N+LLD +M  ++SDFG +      E       + GT GY+APE      
Sbjct: 219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSM 275

Query: 562 YASDGQFSVKSDVFSFG----ILL 581
             +   +  + D+++ G     LL
Sbjct: 276 DETHPGYGKEVDLWACGVILFTLL 299

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  104 bits (261), Expect = 6e-25
 Identities = 54/216 (25%), Positives = 83/216 (38%), Gaps = 35/216 (16%)

Query: 383 ANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE-LKNEIILFSKL 440
               D F   +KLG G FG V+     +   E  +K ++K   Q   E ++ EI +   L
Sbjct: 18  GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL 77

Query: 441 QHRNLVKLLGCCIHGEEKLLIY------------EFMPNKSLDSFIFDQERCKLLDWSKR 488
            H N++K+       E+   +Y            E + +         +     L     
Sbjct: 78  DHPNIIKIFEVF---EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL----- 129

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETE 545
              +      L Y H      ++H+DLK  N+L          KI DFGLA  F  DE  
Sbjct: 130 MKQMMN---ALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH- 182

Query: 546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
             +    GT  YMAPE       + K D++S G+++
Sbjct: 183 --STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVM 215

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  106 bits (266), Expect = 1e-24
 Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 39/222 (17%)

Query: 386 TDNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKNEIILFSKLQHRN 444
             +++  K +G G FG VY+  L D  E+ A+K++ +      +EL+    +  KL H N
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHCN 108

Query: 445 LVKLLGCCIHGEEKL------LIYEFMPNKSLDSFI--FDQERCKLLDWSKRFHI--ICG 494
           +V+L        EK       L+ +++P +++      + + +  L     + ++  +  
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLF- 166

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVG 553
             R L Y+H      I HRD+K  N+LLD D    K+ DFG A+       E N + +  
Sbjct: 167 --RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICS 219

Query: 554 TYGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y Y APE       Y      +   DV+S G +L E++ G+
Sbjct: 220 RY-YRAPELIFGATDY------TSSIDVWSAGCVLAELLLGQ 254

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  104 bits (260), Expect = 2e-24
 Identities = 48/252 (19%), Positives = 86/252 (34%), Gaps = 52/252 (20%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVK-----RLSKISEQGLKELKNEIILFSK 439
              + +   +G+G +G V            A+K     ++ +I+ + ++ +K E+ L  K
Sbjct: 25  QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84

Query: 440 LQHRNLVKLLGC-----CIH--------GE------------------EKLLIYEFMPNK 468
           L H N+ +L         I         G                   + +        +
Sbjct: 85  LHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPE 144

Query: 469 SLDSFIFDQERCKLLDWSKRF------HIICGTARGLLYLHQDSRLRIIHRDLKASNVLL 522
             +  I                     +I+      L YLH      I HRD+K  N L 
Sbjct: 145 CNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLF 201

Query: 523 --DQDMNPKISDFGLARAFGGDETEGNT--NRVVGTYGYMAPE--YASDGQFSVKSDVFS 576
             ++    K+ DFGL++ F               GT  ++APE    ++  +  K D +S
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261

Query: 577 FGILLLEIVSGK 588
            G+LL  ++ G 
Sbjct: 262 AGVLLHLLLMGA 273

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  103 bits (260), Expect = 3e-24
 Identities = 61/237 (25%), Positives = 90/237 (37%), Gaps = 41/237 (17%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVK-----RLSKISEQGLKELKNEIILFSK 439
            D + + + +G+G F  V +       Q+ AVK     + +       ++LK E  +   
Sbjct: 23  EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82

Query: 440 LQHRNLVKLLGCCIHGEEKLLIY---EFMPNKSLDSFIFDQERCKLLDWSKRF------H 490
           L+H ++V+LL          ++Y   EFM    L       E  K  D    +      H
Sbjct: 83  LKHPHIVELLETY---SSDGMLYMVFEFMDGADL----CF-EIVKRADAGFVYSEAVASH 134

Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGN 547
            +      L Y H      IIHRD+K   VLL   +     K+  FG+A   G       
Sbjct: 135 YMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG 191

Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFG----ILLLEIVSGKKNRGFYHSDNKL 600
               VGT  +MAPE      +    DV+  G    ILL    SG     FY +  +L
Sbjct: 192 G--RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL----SGC--LPFYGTKERL 240

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  104 bits (261), Expect = 3e-24
 Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 27/213 (12%)

Query: 383 ANATDNFSINKK--LGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSK 439
                 ++++K   LG G FG V+K    A   ++A K +     +  +E+KNEI + ++
Sbjct: 83  GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQ 142

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD---QERCKL--LDWSKRFHIICG 494
           L H NL++L        + +L+ E++    L    FD    E   L  LD       IC 
Sbjct: 143 LDHANLIQLYDAFESKNDIVLVMEYVDGGEL----FDRIIDESYNLTELDTILFMKQICE 198

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLL-DQDMNP-KISDFGLARAFGGDETEGNTNRVV 552
              G+ ++HQ   + I+H DLK  N+L  ++D    KI DFGLAR +   E         
Sbjct: 199 ---GIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNF 249

Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFG----ILL 581
           GT  ++APE  +    S  +D++S G    +LL
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL 282

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  104 bits (262), Expect = 3e-24
 Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 18/185 (9%)

Query: 391 INKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHRNLVKLL 449
              K+G G +G VYK    D ++     L +I   G+      EI L  +L+H N++ L 
Sbjct: 25  EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQ 84

Query: 450 GCCI-HGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRF------HIICGTARGLLY 501
              + H + K+ L++++     L   I      K      +        ++     G+ Y
Sbjct: 85  KVFLSHADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 143

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNP----KISDFGLARAFGG-DETEGNTNRVVGTYG 556
           LH +    ++HRDLK +N+L+  +       KI+D G AR F    +   + + VV T+ 
Sbjct: 144 LHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 200

Query: 557 YMAPE 561
           Y APE
Sbjct: 201 YRAPE 205

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  102 bits (257), Expect = 4e-24
 Identities = 56/260 (21%), Positives = 98/260 (37%), Gaps = 67/260 (25%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK------ISEQGLKELKNEIILFSK 439
             + +   LG GGFG VY G  ++D   +A+K + K              +  E++L  K
Sbjct: 43  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102

Query: 440 LQHR--NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK----LLDW-------- 485
           +      +++L              ++      DSF+   ER +    L D+        
Sbjct: 103 VSSGFSGVIRL-------------LDWFERP--DSFVLILERPEPVQDLFDFITERGALQ 147

Query: 486 ---SKRF--HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAF 539
              ++ F   ++      + + H      ++HRD+K  N+L+D +    K+ DFG     
Sbjct: 148 EELARSFFWQVLEA----VRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 200

Query: 540 GGDETEGNTNRVVGTYGYMAPEYASDGQFS-VKSDVFSFGILLLEIVSG--------KKN 590
                +       GT  Y  PE+    ++    + V+S GILL ++V G        +  
Sbjct: 201 ----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 256

Query: 591 RGFYH-----SDNKLNLIRH 605
           RG        S    +LIR 
Sbjct: 257 RGQVFFRQRVSSECQHLIRW 276

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  103 bits (258), Expect = 4e-24
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 50/229 (21%)

Query: 387 DNFSINKKLGEGGFGPVYKG--TLADEQEIAVKRLSKISEQG------------LKELKN 432
             +    ++GEG +G V+K        + +A+KR+   + +             L+ L+ 
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70

Query: 433 EIILFSKLQHRNLVKLL----GCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSK 487
                   +H N+V+L           E KL L++E +          DQ+    LD   
Sbjct: 71  F-------EHPNVVRLFDVCTVSRTDRETKLTLVFEHV----------DQDLTTYLDKVP 113

Query: 488 RFHIICGTA--------RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF 539
              +   T         RGL +LH     R++HRDLK  N+L+      K++DFGLAR +
Sbjct: 114 EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170

Query: 540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
                   T+ VV T  Y APE      ++   D++S G +  E+   K
Sbjct: 171 SFQMAL--TSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  101 bits (254), Expect = 5e-24
 Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 41/217 (18%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQH 442
           +DN+ + ++LG+G F  V +        E A K ++   +S +  ++L+ E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 443 RNLVKLLGCCIHGEEKLLIY---EFMPNKSLDSFIFDQ--------ERCKLLDWSKRFHI 491
            N+V+L       +E+   Y   + +    L    F+         E     D S     
Sbjct: 65  PNIVRLHDSI---QEESFHYLVFDLVTGGEL----FEDIVAREFYSEA----DASHCIQQ 113

Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNT 548
           I      + Y H      I+HR+LK  N+LL    +    K++DFGLA      E     
Sbjct: 114 ILE---SIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---W 164

Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFG----ILL 581
           +   GT GY++PE      +S   D+++ G    ILL
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  101 bits (255), Expect = 8e-24
 Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 22/206 (10%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH 442
              + + I + LG G FG V++    + ++    K +          +K EI + +  +H
Sbjct: 2   ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARH 60

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD---QERCKL--LDWSKRFHIICGTAR 497
           RN++ L       EE ++I+EF+    +    F+       +L   +     H +C    
Sbjct: 61  RNILHLHESFESMEELVMIFEFISGLDI----FERINTSAFELNEREIVSYVHQVCE--- 113

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTNRVVGTY 555
            L +LH      I H D++  N++     +   KI +FG AR     +       +    
Sbjct: 114 ALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAP 167

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILL 581
            Y APE       S  +D++S G L+
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLV 193

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  101 bits (254), Expect = 9e-24
 Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 52/233 (22%)

Query: 385 ATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQG---------------LK 428
           AT  +    ++G G +G VYK         +A+K +   +  G               L+
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66

Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIH----GEEKL-LIYEFMPNKSLDSFIFDQERCKLL 483
            L+         +H N+V+L+  C       E K+ L++E +          DQ+    L
Sbjct: 67  RLEAF-------EHPNVVRLMDVCATSRTDREIKVTLVFEHV----------DQDLRTYL 109

Query: 484 DWSKRFHIICGTA--------RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL 535
           D +    +   T         RGL +LH +    I+HRDLK  N+L+      K++DFGL
Sbjct: 110 DKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGL 166

Query: 536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           AR +        T  VV T  Y APE      ++   D++S G +  E+   K
Sbjct: 167 ARIYSYQMA--LTPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  103 bits (258), Expect = 1e-23
 Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 25/211 (11%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--------ISEQGLKELKNEIIL 436
            D + ++K LG G  G V         +++A++ +SK                ++ EI +
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             KL H  ++K+       E+  ++ E M    L   +   +R K       F+ +    
Sbjct: 194 LKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL-- 250

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
             + YLH+     IIHRDLK  NVLL   ++D   KI+DFG ++  G          + G
Sbjct: 251 -AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCG 303

Query: 554 TYGYMAPE---YASDGQFSVKSDVFSFGILL 581
           T  Y+APE         ++   D +S G++L
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  101 bits (253), Expect = 1e-23
 Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 42/221 (19%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE---------LKNEI- 434
            +N+   + LG G    V +       +E AVK +                      E+ 
Sbjct: 16  YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75

Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ--------ERCKLLDWS 486
           IL     H N+++L           L+++ M    L    FD         E+    +  
Sbjct: 76  ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLTEKVTLSEK----ETR 127

Query: 487 KRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG 546
           K    +      +  LH+   L I+HRDLK  N+LLD DMN K++DFG +      E   
Sbjct: 128 KIMRALLE---VICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-- 179

Query: 547 NTNRVVGTYGYMAPE------YASDGQFSVKSDVFSFGILL 581
               V GT  Y+APE        +   +  + D++S G+++
Sbjct: 180 -LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  102 bits (256), Expect = 1e-23
 Identities = 49/230 (21%), Positives = 92/230 (40%), Gaps = 45/230 (19%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKN----EIILFS 438
              D F + +  G+G FG V  G        +A+K   K+ +      +N     +   +
Sbjct: 20  KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK---KVIQD--PRFRNRELQIMQDLA 74

Query: 439 KLQHRNLVKLLGCCIHGEEK-------LLIYEFMP---NKSLDSFIFDQERCKLLDWSKR 488
            L H N+V+L        E+        ++ E++P   ++   ++   + +        +
Sbjct: 75  VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYY--RRQVAPPPILIK 132

Query: 489 FHI--ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLARAFGGDETE 545
             +  +    R +  LH  S + + HRD+K  NVL+++     K+ DFG A+     E  
Sbjct: 133 VFLFQLI---RSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP- 187

Query: 546 GNTNRVVGTYGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
            N   +   Y Y APE       Y      +   D++S G +  E++ G+
Sbjct: 188 -NVAYICSRY-YRAPELIFGNQHY------TTAVDIWSVGCIFAEMMLGE 229

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  101 bits (255), Expect = 1e-23
 Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 62/237 (26%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKE------LKNEIILFSK 439
             +    K+G+G FG V+K       +  A+K++   +E   KE      L+ EI +   
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---KEGFPITALR-EIKILQL 72

Query: 440 LQHRNLVKLLGCCIHGEEKL--------LIYEFMPN---KSLDS--FIFDQERCK----- 481
           L+H N+V L+  C               L+++F  +     L +    F     K     
Sbjct: 73  LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 132

Query: 482 LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG 541
           LL              GL Y+H++   +I+HRD+KA+NVL+ +D   K++DFGLARAF  
Sbjct: 133 LL-------------NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL 176

Query: 542 DETEGN---TNRVVGTYGYMAPE-------YASDGQFSVKSDVFSFGILLLEIVSGK 588
            +       TNRVV T  Y  PE       Y          D++  G ++ E+ +  
Sbjct: 177 AKNSQPNRYTNRVV-TLWYRPPELLLGERDY------GPPIDLWGAGCIMAEMWTRS 226

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =   99 bits (250), Expect = 2e-23
 Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 20/210 (9%)

Query: 383 ANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK------ISEQGLKELKNEII 435
           +   D++ + ++LG G F  V K       +E A K + K            +E++ E+ 
Sbjct: 1   SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60

Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           +  +++H N++ L     +  + +LI E +    L  F+ ++E     + ++    I   
Sbjct: 61  ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD- 119

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLARAFGGDETEGNTNRV 551
             G+ YLH     RI H DLK  N++L      +   K+ DFG+A              +
Sbjct: 120 --GVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---FKNI 171

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
            GT  ++APE  +     +++D++S G++ 
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  101 bits (254), Expect = 2e-23
 Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 43/218 (19%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQH 442
           +DN+ + ++LG+G F  V +        E A K ++   +S +  ++L+ E  +  KLQH
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDW---SKRF------H 490
            N+V+L       +E+   Y               +      L +     + +      H
Sbjct: 88  PNIVRLHDSI---QEESFHYLVF------------DLVTGGELFEDIVAREFYSEADASH 132

Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGN 547
            I      + Y H      I+HR+LK  N+LL    +    K++DFGLA      E    
Sbjct: 133 CIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--- 186

Query: 548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFG----ILL 581
            +   GT GY++PE      +S   D+++ G    ILL
Sbjct: 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  100 bits (250), Expect = 3e-23
 Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 51/238 (21%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK------------------------- 421
            +++  ++G+G +G V       D    A+K LSK                         
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73

Query: 422 -ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY---EFMPNKSLDSFIFDQ 477
                 ++++  EI +  KL H N+VKL+   +    +  +Y   E +    +     + 
Sbjct: 74  IQPRGPIEQVYQEIAILKKLDHPNVVKLV-EVLDDPNEDHLYMVFELVNQGPV----MEV 128

Query: 478 ERCKLL--DWSKRFH--IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDF 533
              K L  D ++ +   +I G    + YLH     +IIHRD+K SN+L+ +D + KI+DF
Sbjct: 129 PTLKPLSEDQARFYFQDLIKG----IEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADF 181

Query: 534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSV---KSDVFSFGILLLEIVSGK 588
           G++  F G +   +    VGT  +MAPE  S+ +        DV++ G+ L   V G+
Sbjct: 182 GVSNEFKGSDALLSN--TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  100 bits (251), Expect = 3e-23
 Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 41/219 (18%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--------ISEQGLKELKNEIIL 436
            D + ++K LG G  G V         +++A+K +SK                ++ EI +
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFD--------QERCKLLDWSKR 488
             KL H  ++K+       E+  ++ E M    L    FD        +E          
Sbjct: 69  LKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGEL----FDKVVGNKRLKEA----TCKLY 119

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETE 545
           F+ +      + YLH      IIHRDLK  NVLL   ++D   KI+DFG ++  G     
Sbjct: 120 FYQMLL---AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 172

Query: 546 GNTNRVVGTYGYMAPE---YASDGQFSVKSDVFSFGILL 581
                + GT  Y+APE         ++   D +S G++L
Sbjct: 173 --MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 99.7 bits (249), Expect = 3e-23
 Identities = 54/262 (20%), Positives = 96/262 (36%), Gaps = 69/262 (26%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK------ISEQGLKELKNEI----I 435
             + +   LG+GGFG V+ G  L D  ++A+K + +                 E+     
Sbjct: 31  AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90

Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK----LLDW------ 485
           + +   H  +++L              ++   +  + F+   ER      L D+      
Sbjct: 91  VGAGGGHPGVIRL-------------LDWFETQ--EGFMLVLERPLPAQDLFDYITEKGP 135

Query: 486 -----SKRF--HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP-KISDFGLAR 537
                S+ F   ++      + + H      ++HRD+K  N+L+D      K+ DFG   
Sbjct: 136 LGEGPSRCFFGQVVAA----IQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGA 188

Query: 538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFS-VKSDVFSFGILLLEIVSG--------K 588
                  +       GT  Y  PE+ S  Q+  + + V+S GILL ++V G        +
Sbjct: 189 LL----HDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE 244

Query: 589 KNRGFYH-----SDNKLNLIRH 605
                 H     S +   LIR 
Sbjct: 245 ILEAELHFPAHVSPDCCALIRR 266

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  101 bits (254), Expect = 5e-23
 Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 42/224 (18%)

Query: 380 ATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIIL 436
            T    T+ + + ++LG+G F  V +   +   QE A   ++   +S +  ++L+ E  +
Sbjct: 4   ITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARI 63

Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDW---SKRF- 489
              L+H N+V+L        E+   Y               +      L +     + + 
Sbjct: 64  CRLLKHPNIVRLHDSI---SEEGHHYLIF------------DLVTGGELFEDIVAREYYS 108

Query: 490 -----HIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGG 541
                H I      +L+ HQ   + ++HR+LK  N+LL    +    K++DFGLA    G
Sbjct: 109 EADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165

Query: 542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFG----ILL 581
           ++         GT GY++PE      +    D+++ G    ILL
Sbjct: 166 EQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL 207

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 99.6 bits (249), Expect = 5e-23
 Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 20/209 (9%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK------ISEQGLKELKNEIIL 436
           N  D +   ++LG G F  V K    +   + A K + K            ++++ E+ +
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67

Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E     + ++    I    
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN-- 125

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLARAFGGDETEGNTNRVV 552
            G+ YLH    L+I H DLK  N++L          KI DFGLA              + 
Sbjct: 126 -GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 178

Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILL 581
           GT  ++APE  +     +++D++S G++ 
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVIT 207

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 99.6 bits (249), Expect = 5e-23
 Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 20/210 (9%)

Query: 383 ANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK------ISEQGLKELKNEII 435
               D + I ++LG G F  V K    +   E A K + K            +E++ E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           +  ++ H N++ L     +  + +LI E +    L  F+  +E     + +     I   
Sbjct: 68  ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD- 126

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP----KISDFGLARAFGGDETEGNTNRV 551
             G+ YLH     +I H DLK  N++L     P    K+ DFGLA              +
Sbjct: 127 --GVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNI 178

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
            GT  ++APE  +     +++D++S G++ 
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  100 bits (250), Expect = 6e-23
 Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 20/210 (9%)

Query: 383 ANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKIS------EQGLKELKNEII 435
               D + I ++LG G F  V K    +   E A K + K            +E++ E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           +  ++ H N++ L     +  + +LI E +    L  F+  +E     + +     I   
Sbjct: 68  ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD- 126

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLARAFGGDETEGNTNRV 551
             G+ YLH     +I H DLK  N++L        + K+ DFGLA              +
Sbjct: 127 --GVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNI 178

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
            GT  ++APE  +     +++D++S G++ 
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 98.9 bits (247), Expect = 1e-22
 Identities = 56/216 (25%), Positives = 85/216 (39%), Gaps = 43/216 (19%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN 444
           +D F +  +LG G    VY+      ++  A+K L K  ++  K ++ EI +  +L H N
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDW---SKRF------HII 492
           ++KL       E    I   +            E      L D       +        +
Sbjct: 110 IIKLKEIF---ETPTEISLVL------------ELVTGGELFDRIVEKGYYSERDAADAV 154

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTN 549
                 + YLH+     I+HRDLK  N+L      D   KI+DFGL++            
Sbjct: 155 KQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL---MK 208

Query: 550 RVVGTYGYMAPEYASDGQFSVKSDVFSFG----ILL 581
            V GT GY APE      +  + D++S G    ILL
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL 244

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 98.9 bits (247), Expect = 1e-22
 Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 40/213 (18%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN 444
           TD + + + +G G +    +    A   E AVK + K      +E++   IL    QH N
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHPN 77

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCK---LLDW---SKRF------HII 492
           ++ L       ++   +Y               E  K   LLD     K F       ++
Sbjct: 78  IITLKDVY---DDGKYVYVVT------------ELMKGGELLDKILRQKFFSEREASAVL 122

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLL-DQDMNP---KISDFGLARAFGGDETEGNT 548
               + + YLH      ++HRDLK SN+L  D+  NP   +I DFG A+    +     T
Sbjct: 123 FTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179

Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
                T  ++APE      +    D++S G+LL
Sbjct: 180 --PCYTANFVAPEVLERQGYDAACDIWSLGVLL 210

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 96.5 bits (241), Expect = 2e-22
 Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 30/214 (14%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKE-LKNEIILFSKLQHR 443
           ++ +   LG G FG V  G       ++AVK L++  I    +   +K EI      +H 
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71

Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFH-IICGTARGLLY 501
           +++KL    I       ++ E++    L  +I    R + ++  + F  I+        Y
Sbjct: 72  HIIKLYQV-ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD----Y 126

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNTNRVVGTYGYM 558
            H   R  ++HRDLK  NVLLD  MN KI+DFGL+      E   T        G+  Y 
Sbjct: 127 CH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT------SCGSPNYA 177

Query: 559 APEYAS----DGQFSVKSDVFSFGILLLEIVSGK 588
           APE  S     G    + D++S G++L  ++ G 
Sbjct: 178 APEVISGRLYAGP---EVDIWSCGVILYALLCGT 208

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 97.3 bits (243), Expect = 3e-22
 Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 38/220 (17%)

Query: 386 TDNFSINKK-LGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-H 442
            D + + +  LGEG    V     L   QE AVK + K        +  E+ +  + Q H
Sbjct: 11  EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH 70

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ--------ERCKLLDWSKRFHIICG 494
           RN+++L+      +   L++E M   S+               E     + S     +  
Sbjct: 71  RNVLELIEFFEEEDRFYLVFEKMRGGSI----LSHIHKRRHFNEL----EASVVVQDVAS 122

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAF--GGDETEGNTN 549
               L +LH      I HRDLK  N+L    +Q    KI DF L       GD +  +T 
Sbjct: 123 ---ALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176

Query: 550 R---VVGTYGYMAPE-----YASDGQFSVKSDVFSFGILL 581
                 G+  YMAPE           +  + D++S G++L
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 97.3 bits (243), Expect = 3e-22
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 19/229 (8%)

Query: 363 QKNEDQNIDLDLPLFELATIANATDNFSINKK-LGEGGFGPVYKGT-LADEQEIAVKRLS 420
             +    +DL        ++ N  + + +  K LG G F  V +    +  QE A K L 
Sbjct: 4   HHHHSSGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLK 63

Query: 421 K--ISEQGLKELKNEIILFSKLQHR-NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ 477
           K    +    E+ +EI +    +    ++ L     +  E +LI E+     + S    +
Sbjct: 64  KRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPE 123

Query: 478 ERCKL--LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISD 532
               +   D  +    I     G+ YLHQ     I+H DLK  N+LL       + KI D
Sbjct: 124 LAEMVSENDVIRLIKQILE---GVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVD 177

Query: 533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
           FG++R  G          ++GT  Y+APE  +    +  +D+++ GI+ 
Sbjct: 178 FGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 96.3 bits (240), Expect = 9e-22
 Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 35/212 (16%)

Query: 386 TDNFSINKK-LGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEI-ILFSKLQH 442
           TD++ ++K+ LG G  G V +       Q+ A+K L         + + E+   +     
Sbjct: 27  TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGG 81

Query: 443 RNLVKLLGCC---IHGEEKL-LIYEFMPNKSLDSFIFD--QERCKLL----DWSKRFHII 492
            ++V +L       HG+  L +I E M    L    F   QER        + ++    I
Sbjct: 82  PHIVCILDVYENMHHGKRCLLIIMECMEGGEL----FSRIQERGDQAFTEREAAEIMRDI 137

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTN 549
                 + +LH      I HRD+K  N+L    ++D   K++DFG A+      T+    
Sbjct: 138 GT---AIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET----TQNALQ 187

Query: 550 RVVGTYGYMAPEYASDGQFSVKSDVFSFGILL 581
               T  Y+APE     ++    D++S G+++
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 97.0 bits (242), Expect = 1e-21
 Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 34/228 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           D+F I + +G+G FG V      D +++ A+K ++K   +    ++ +  E+ +   L+H
Sbjct: 15  DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFHIICGTA 496
             LV L       EE + ++ + +    L      +  F +E  KL         IC   
Sbjct: 75  PFLVNLW-YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF--------ICELV 125

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
             L YL      RIIHRD+K  N+LLD+  +  I+DF +A     +        + GT  
Sbjct: 126 MALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKP 179

Query: 557 YMAPE-YASDGQ----FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
           YMAPE ++S       F+V  D +S G+   E++ G+  R ++   + 
Sbjct: 180 YMAPEMFSSRKGAGYSFAV--DWWSLGVTAYELLRGR--RPYHIRSST 223

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 95.0 bits (237), Expect = 2e-21
 Identities = 53/215 (24%), Positives = 97/215 (45%), Gaps = 27/215 (12%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ- 441
              D++ + +KLG G +  V++   + + +++ VK L  + +   K++K EI +   L+ 
Sbjct: 33  GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRG 89

Query: 442 HRNLVKLLGCCIHGEEK---LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--ICGTA 496
             N++ L    +         L++E + N              L D+  RF++  I    
Sbjct: 90  GPNIITLA-DIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEIL--- 140

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           + L Y H  S   I+HRD+K  NV++D +    ++ D+GLA        +    RV   Y
Sbjct: 141 KALDYCH--SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE--FYHPGQEYNVRVASRY 195

Query: 556 GYMAPEYASDGQFSVKS-DVFSFGILLLEIVSGKK 589
            +  PE   D Q    S D++S G +L  ++  K+
Sbjct: 196 -FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 229

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 94.3 bits (235), Expect = 4e-21
 Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 53/225 (23%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKE-LKNEIILFSKLQHR 443
            + I + LGEG FG V   T    +Q++A+K +S+  + +  +   ++ EI     L+H 
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKS------------LDSFIFDQERCKLLDWSKRFH- 490
           +++KL             Y+ +   +            L  +I +++R    +  + F  
Sbjct: 70  HIIKL-------------YDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQ 116

Query: 491 IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGN 547
           IIC       Y H   R +I+HRDLK  N+LLD ++N KI+DFGL+          T   
Sbjct: 117 IICAIE----YCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT--- 166

Query: 548 TNRVVGTYGYMAPEYAS----DGQFSVKSDVFSFGILLLEIVSGK 588
                G+  Y APE  +     G    + DV+S GI+L  ++ G+
Sbjct: 167 ---SCGSPNYAAPEVINGKLYAGP---EVDVWSCGIVLYVMLVGR 205

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 96.0 bits (239), Expect = 5e-21
 Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 30/214 (14%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKE-LKNEIILFSKLQHR 443
           ++ +   LG G FG V  G       ++AVK L++  I    +   ++ EI      +H 
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76

Query: 444 NLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFH-IICGTARGLLY 501
           +++KL    I     + ++ E++    L  +I    R    +  + F  I+ G      Y
Sbjct: 77  HIIKLYQV-ISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD----Y 131

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE---TEGNTNRVVGTYGYM 558
            H   R  ++HRDLK  NVLLD  MN KI+DFGL+      E   T        G+  Y 
Sbjct: 132 CH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT------SCGSPNYA 182

Query: 559 APEYAS----DGQFSVKSDVFSFGILLLEIVSGK 588
           APE  S     G    + D++S G++L  ++ G 
Sbjct: 183 APEVISGRLYAGP---EVDIWSSGVILYALLCGT 213

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 93.5 bits (233), Expect = 6e-21
 Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 32/203 (15%)

Query: 392 NKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLL 449
           +K LGEG F    K       Q  AVK +SK   +     + EI      + H N+VKL 
Sbjct: 16  DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLH 72

Query: 450 GCCIHGEEKLLIYEFMPNKSLDSFIFD--QERCKLLDWSKRF------HIICGTARGLLY 501
                     L+ E +    L    F+  +++       K F      +I+      + +
Sbjct: 73  EVFHDQLHTFLVMELLNGGEL----FERIKKK-------KHFSETEASYIMRKLVSAVSH 121

Query: 502 LHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           +H    + ++HRDLK  N+L    + ++  KI DFG AR    D     T     T  Y 
Sbjct: 122 MHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--PCFTLHYA 176

Query: 559 APEYASDGQFSVKSDVFSFGILL 581
           APE  +   +    D++S G++L
Sbjct: 177 APELLNQNGYDESCDLWSLGVIL 199

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 92.1 bits (229), Expect = 5e-20
 Identities = 43/206 (20%), Positives = 84/206 (40%), Gaps = 33/206 (16%)

Query: 391 INKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEI-ILFSKLQHRNLVKL 448
            ++ LG G  G V +      +++ A+K L         + + E+ + +   Q  ++V++
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRI 120

Query: 449 LGCC---IHGEEKL-LIYEFMPNKSLDSFIFD--QERCKLL----DWSKRFHIICGTARG 498
           +        G + L ++ E +    L    F   Q+R        + S+    I      
Sbjct: 121 VDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEA--- 173

Query: 499 LLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           + YLH    + I HRD+K  N+L      +   K++DFG A+      +         T 
Sbjct: 174 IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS---LTTPCYTP 227

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILL 581
            Y+APE     ++    D++S G+++
Sbjct: 228 YYVAPEVLGPEKYDKSCDMWSLGVIM 253

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 90.7 bits (226), Expect = 5e-20
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 32/217 (14%)

Query: 387 DNFSINKKLGEGGFGPVY---KGTLADEQEI-AVKRLSK--ISEQGLKELKNEIILFSKL 440
             F + K LG+G FG V+   K + +D +++ A+K L K  +  +     K E  +  ++
Sbjct: 24  SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83

Query: 441 QHRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFH---I 491
            H  +VKL       E KL LI +F+    L        +F +E         +F+   +
Sbjct: 84  NHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV-------KFYLAEL 135

Query: 492 ICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV 551
                  L +LH    L II+RDLK  N+LLD++ + K++DFGL++     E +  +   
Sbjct: 136 ALA----LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--F 186

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            GT  YMAPE  +    +  +D +SFG+L+ E+++G 
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 90.8 bits (226), Expect = 6e-20
 Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 24/213 (11%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQH 442
              +     +G G +G V         +++A+K+LS+   SE   K    E++L   +QH
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH 82

Query: 443 RNLVKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
            N++ LL                L+  FM    L   +      K  +   ++ ++    
Sbjct: 83  ENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIM----GLKFSEEKIQY-LVYQML 136

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           +GL Y+H      ++HRDLK  N+ +++D   KI DFGLAR    + T       V T  
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG-----YVVTRW 188

Query: 557 YMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGK 588
           Y APE   S   ++   D++S G ++ E+++GK
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 90.8 bits (226), Expect = 7e-20
 Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 35/224 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKEL---KNEIILFSKLQH 442
           D F   K LG G FG V      +     A+K L K     LK++    NE  +   +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFI-----FDQERCKLLDWSKRF---HIIC 493
             LVKL          L ++ E++    + S +     F +          RF    I+ 
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-------RFYAAQIVL 152

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
                  YLH    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + G
Sbjct: 153 T----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCG 200

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSD 597
           T   +APE      ++   D ++ G+L+ E+ +G     F+   
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP--FFADQ 242

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 90.2 bits (224), Expect = 2e-19
 Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 25/216 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           D+F I K +G G F  V    +    ++ A+K ++K   +    +   + E  +      
Sbjct: 61  DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFH---IICGTARG 498
           R + +L       E  L L+ E+     L + +         + + RF+   I+      
Sbjct: 121 RWITQLH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA-RFYLAEIVMA---- 174

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
           +  +H+   L  +HRD+K  N+LLD+  + +++DFG       D T   +   VGT  Y+
Sbjct: 175 IDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR-SLVAVGTPDYL 230

Query: 559 APE-------YASDGQFSVKSDVFSFGILLLEIVSG 587
           +PE           G +  + D ++ G+   E+  G
Sbjct: 231 SPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG 266

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 89.3 bits (222), Expect = 2e-19
 Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 32/214 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE-LKNEIILFSKLQHRN 444
           D +   K +G G FG          ++ +AVK + +     + E ++ EII    L+H N
Sbjct: 20  DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER--GAAIDENVQREIINHRSLRHPN 77

Query: 445 LVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFH-IICGTARGLLYL 502
           +V+     I     L +I E+     L   I +  R    +    F  ++ G +    Y 
Sbjct: 78  IVRFKEV-ILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVS----YC 132

Query: 503 HQDSRLRIIHRDLKASNVLLDQD--MNPKISDFGLARAFGGDE---TEGNTNRVVGTYGY 557
           H    ++I HRDLK  N LLD       KI DFG +++        +       VGT  Y
Sbjct: 133 H---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS------TVGTPAY 183

Query: 558 MAPEYAS----DGQFSVKSDVFSFGILLLEIVSG 587
           +APE       DG+    +DV+S G+ L  ++ G
Sbjct: 184 IAPEVLLRQEYDGK---IADVWSCGVTLYVMLVG 214

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 90.2 bits (224), Expect = 3e-19
 Identities = 52/240 (21%), Positives = 102/240 (42%), Gaps = 24/240 (10%)

Query: 362 EQKNEDQNIDLDLPLFELATIANAT-DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRL 419
            +KN  + ++   P            ++F I K +G G FG V    L +  ++ A+K L
Sbjct: 48  REKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKIL 107

Query: 420 SKISEQGLKEL---KNEIILFSKLQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFIF 475
           +K       E    + E  +      + +  L       +  L L+ ++     L + + 
Sbjct: 108 NKWEMLKRAETACFREERDVLVNGDSKWITTLH-YAFQDDNNLYLVMDYYVGGDLLTLLS 166

Query: 476 DQERCKLLDWSKRFH---IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD 532
             E     + + RF+   ++      +  +HQ   L  +HRD+K  N+L+D + + +++D
Sbjct: 167 KFEDRLPEEMA-RFYLAEMVIA----IDSVHQ---LHYVHRDIKPDNILMDMNGHIRLAD 218

Query: 533 FGLARAFGGDETEGNTNRVVGTYGYMAPE-----YASDGQFSVKSDVFSFGILLLEIVSG 587
           FG       D T   ++  VGT  Y++PE         G++  + D +S G+ + E++ G
Sbjct: 219 FGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 89.8 bits (223), Expect = 3e-19
 Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 23/212 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           + F   K LG+G FG V            A+K L K   +++  +     E  +    +H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFHIICGTA 496
             L  L        ++L  + E+     L        +F ++R        RF+      
Sbjct: 208 PFLTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA-------RFYGAE-IV 258

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
             L YLH  S   +++RDLK  N++LD+D + KI+DFGL +    D     T    GT  
Sbjct: 259 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPE 314

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           Y+APE   D  +    D +  G+++ E++ G+
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 88.0 bits (219), Expect = 4e-19
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 33/214 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKEL---KNEIILFSKLQH 442
            +F I + LG G FG V+           A+K L K     LK++    +E ++ S + H
Sbjct: 6   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSLDSFI-----FDQERCKLLDWSKRFH---IIC 493
             ++++ G      +++ +I +++    L S +     F            +F+   +  
Sbjct: 66  PFIIRMWGTF-QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA-------KFYAAEVCL 117

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
                L YLH      II+RDLK  N+LLD++ + KI+DFG A+          T  + G
Sbjct: 118 A----LEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAK-----YVPDVTYTLCG 165

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
           T  Y+APE  S   ++   D +SFGIL+ E+++G
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 88.6 bits (220), Expect = 5e-19
 Identities = 50/251 (19%), Positives = 97/251 (38%), Gaps = 61/251 (24%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQE-IAVKRLSKISEQGLKELKNEIILFSKLQH 442
            ++  +S+ K LG G FG V +    +  +  A+K++ +      +EL     +   L H
Sbjct: 4   TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELD----IMKVLDH 59

Query: 443 RNLVKLLGCCIHGEEKL---------------------------------------LIYE 463
            N++KL+    +                                            +I E
Sbjct: 60  VNIIKLV-DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118

Query: 464 FMPNKSLDSFI--FDQERCKLLDWSKRFHI--ICGTARGLLYLHQDSRLRIIHRDLKASN 519
           ++P  +L   +  F +    +       +I  +    R + ++H    L I HRD+K  N
Sbjct: 119 YVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLF---RAVGFIHS---LGICHRDIKPQN 171

Query: 520 VLLDQDMNP-KISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YASDGQFSVKSDVFSF 577
           +L++   N  K+ DFG A+      +E +   +   + Y APE      +++   D++S 
Sbjct: 172 LLVNSKDNTLKLCDFGSAKKL--IPSEPSVAYICSRF-YRAPELMLGATEYTPSIDLWSI 228

Query: 578 GILLLEIVSGK 588
           G +  E++ GK
Sbjct: 229 GCVFGELILGK 239

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 88.1 bits (218), Expect = 6e-19
 Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 11/95 (11%)

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT- 554
           A+G+ +L   +  + IHRDL A N+LL +    KI DFGLAR    D  +       G  
Sbjct: 203 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRKGDA 255

Query: 555 ---YGYMAPEYASDGQFSVKSDVFSFGILLLEIVS 586
                +MAPE   D  ++++SDV+SFG+LL EI S
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 72.3 bits (177), Expect = 1e-13
 Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 19/160 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRL-SKISEQGLKELKNEIILFSK 439
           D   + K LG G FG V +         A  + +AVK L    +    + L +E+ +   
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 440 L-QHRNLVKLLGCCI-HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           +  H N+V LLG C   G   ++I EF    +L +++           SKR   +    +
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL----------RSKRNEFVPYKTK 131

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR 537
           G  +      +  I  DLK     +    +   S F   +
Sbjct: 132 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 88.7 bits (220), Expect = 1e-18
 Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQH 442
              +   K +G G  G V        ++ +A+K+LS+   ++   K    E++L   + H
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120

Query: 443 RNLVKLL------GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
           +N++ LL            ++  L+ E M    L   I    + +L      + ++    
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVI----QMELDHERMSY-LLYQML 174

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
            G+ +LH      IIHRDLK SN+++  D   KI DFGLAR      +   T  VV T  
Sbjct: 175 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRY 228

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           Y APE      +    D++S G ++ E+V  K
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 86.4 bits (215), Expect = 2e-18
 Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 34/219 (15%)

Query: 387 DNFSINKKLGEGGFGPVY---KGTLADEQEI-AVKRLSK---ISEQGLKE-LKNEIILFS 438
           + F + + LG+GG+G V+   K T A+  +I A+K L K   +         K E  +  
Sbjct: 17  ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76

Query: 439 KLQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRF--- 489
           +++H  +V L+        KL LI E++    L        IF ++          F   
Sbjct: 77  EVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA-------CFYLA 128

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN 549
            I       L +LHQ     II+RDLK  N++L+   + K++DFGL +    D T  +T 
Sbjct: 129 EISMA----LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT- 180

Query: 550 RVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
              GT  YMAPE       +   D +S G L+ ++++G 
Sbjct: 181 -FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 87.0 bits (216), Expect = 2e-18
 Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 25/216 (11%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHR 443
              ++    +GEG +G V       ++  +A+K++S    Q   +    EI +  + +H 
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85

Query: 444 NLVKLLGCCIHGEEKL-----LIYEFMP---NKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           N++ +         +      ++ + M     K L +     +           + +   
Sbjct: 86  NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC--------YFLYQI 137

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN--TNRVVG 553
            RGL Y+H  S   ++HRDLK SN+LL+   + KI DFGLAR    D       T  V  
Sbjct: 138 LRGLKYIH--SA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA- 193

Query: 554 TYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGK 588
           T  Y APE   +   ++   D++S G +L E++S +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 86.5 bits (215), Expect = 2e-18
 Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 24/212 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LG+G FG V            A+K L K   I++  +     E  +    +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFHIICGTA 496
             L  L        ++L  + E+     L        +F +ER        RF+      
Sbjct: 65  PFLTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA-------RFYGAE-IV 115

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
             L YLH      +++RD+K  N++LD+D + KI+DFGL +    D     T    GT  
Sbjct: 116 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPE 170

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           Y+APE   D  +    D +  G+++ E++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 86.7 bits (215), Expect = 2e-18
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 21/212 (9%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQH 442
              +   K +G G  G V        E+ +A+K+LS+   ++   K    E++L   + H
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83

Query: 443 RNLVKLL------GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
           +N++ LL            ++  ++ E M   +L   I    + +L      + ++    
Sbjct: 84  KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI----QMELDHERMSY-LLYQML 137

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
            G+ +LH      IIHRDLK SN+++  D   KI DFGLAR      +   T  VV T  
Sbjct: 138 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVV-TRY 191

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           Y APE      +    D++S G ++ E++ G 
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 86.2 bits (214), Expect = 3e-18
 Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 30/222 (13%)

Query: 386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELK-----------NEI 434
              +++ + +  G +G V  G  ++   +A+KR+      G                 EI
Sbjct: 21  QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80

Query: 435 ILFSKLQHRNLVKLLGCCIHGEEKL-----LIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
            L +   H N++ L    +H EE       L+ E M    L   I DQ R  +     ++
Sbjct: 81  RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQ-RIVISPQHIQY 138

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE--TEGN 547
             +     GL  LH+     ++HRDL   N+LL  + +  I DF LAR    D   T   
Sbjct: 139 -FMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTH-- 192

Query: 548 TNRVVGTYGYMAPEY-ASDGQFSVKSDVFSFGILLLEIVSGK 588
               V    Y APE       F+   D++S G ++ E+ + K
Sbjct: 193 ---YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 86.2 bits (214), Expect = 3e-18
 Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 31/216 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNE-IILFSKLQ 441
            +F   K +G+G FG V       E+   AVK L K   + ++  K + +E  +L   ++
Sbjct: 38  SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97

Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRF---HII 492
           H  LV L        +KL  + +++    L         F + R        RF    I 
Sbjct: 98  HPFLVGLH-FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRA-------RFYAAEIA 149

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
                 L YLH    L I++RDLK  N+LLD   +  ++DFGL +     E    T+   
Sbjct: 150 SA----LGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNSTTSTFC 200

Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           GT  Y+APE      +    D +  G +L E++ G 
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 86.8 bits (215), Expect = 3e-18
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 21/193 (10%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGL--KELKNEIILFSKLQH 442
            D + I   +G G +G V +     +++ +A+K++ ++ E  +  K +  EI + ++L H
Sbjct: 52  PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH 111

Query: 443 RNLVKLLGCCI-HGEEKL----LIYEFMP---NKSLDSFIFDQERCKLLDWSKRFHIICG 494
            ++VK+L   I    EK     ++ E       K   + +       L +   +  ++  
Sbjct: 112 DHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV------YLTELHIKT-LLYN 164

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
              G+ Y+H  S   I+HRDLK +N L++QD + K+ DFGLAR     E   +   +   
Sbjct: 165 LLVGVKYVH--SA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPR 221

Query: 555 YGYMAPEYASDGQ 567
              M        +
Sbjct: 222 EDDMNLVTFPHTK 234

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 86.3 bits (214), Expect = 4e-18
 Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 32/217 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           +++ + K +G G FG V        +++ A+K LSK   I          E  + +    
Sbjct: 69  EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128

Query: 443 RNLVKLLGCCIHGEEKL-LIYEFMPN----KSLDSFIFDQERCKLLDWSKRFH---IICG 494
             +V+L       +  L ++ E+MP       + ++   ++         RF+   ++  
Sbjct: 129 PWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA-------RFYTAEVVLA 180

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
               L  +H    +  IHRD+K  N+LLD+  + K++DFG       +      +  VGT
Sbjct: 181 ----LDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR-CDTAVGT 232

Query: 555 YGYMAPE----YASDGQFSVKSDVFSFGILLLEIVSG 587
             Y++PE       DG +  + D +S G+ L E++ G
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 85.5 bits (212), Expect = 5e-18
 Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 23/213 (10%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQH 442
              +   + +G G +G V          ++A+K+L +   SE   K    E+ L   ++H
Sbjct: 24  RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH 83

Query: 443 RNLVKLLGCCIHGEEKL------LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
            N++ LL      E         L+  FM    L   +  +   KL +   +F ++    
Sbjct: 84  ENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE---KLGEDRIQF-LVYQML 138

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           +GL Y+H      IIHRDLK  N+ +++D   KI DFGLAR    + T       V T  
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTG-----YVVTRW 190

Query: 557 YMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGK 588
           Y APE   +  +++   D++S G ++ E+++GK
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 84.6 bits (210), Expect = 7e-18
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 40/224 (17%)

Query: 387 DNFSINKKLGEGGFGPVY---KGTLADEQEI-AVKRLSK---ISEQGLKE-LKNE-IILF 437
           +NF + K LG G +G V+   K +  D  ++ A+K L K   + +    E  + E  +L 
Sbjct: 54  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113

Query: 438 SKLQHRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFH- 490
              Q   LV L       E KL LI +++    L         F +          + + 
Sbjct: 114 HIRQSPFLVTLH-YAFQTETKLHLILDYINGGELFTHLSQRERFTEHEV-------QIYV 165

Query: 491 --IICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
             I+      L +LH+   L II+RD+K  N+LLD + +  ++DFGL++ F  DETE   
Sbjct: 166 GEIVLA----LEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER-A 217

Query: 549 NRVVGTYGYMAPEYASDGQ----FSVKSDVFSFGILLLEIVSGK 588
               GT  YMAP+    G      +V  D +S G+L+ E+++G 
Sbjct: 218 YDFCGTIEYMAPDIVRGGDSGHDKAV--DWWSLGVLMYELLTGA 259

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 86.2 bits (213), Expect = 1e-17
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 27/214 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNE-IILFSKLQ 441
            +F+    LG+G FG V         E+ AVK L K   I +  ++    E  +L    +
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400

Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFHIICGT 495
              L +L   C    ++L  + E++    L         F +           F+     
Sbjct: 401 PPFLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA-------VFYAAE-I 451

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTNRVVGT 554
           A GL +L       II+RDLK  NV+LD + + KI+DFG+ +       T   T    GT
Sbjct: 452 AIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT---TKTFCGT 505

Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             Y+APE  +   +    D ++FG+LL E+++G+
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 83.8 bits (208), Expect = 1e-17
 Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 33/217 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNE-IILFSKLQ 441
            +F+    LG+G FG V         E+ AVK L K   I +  ++    E  +L    +
Sbjct: 20  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79

Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFH---II 492
              L +L   C    ++L  + E++    L         F +           F+   I 
Sbjct: 80  PPFLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA-------VFYAAEIA 131

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA-FGGDETEGNTNRV 551
            G    L +L       II+RDLK  NV+LD + + KI+DFG+ +       T   T   
Sbjct: 132 IG----LFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT---TKTF 181

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            GT  Y+APE  +   +    D ++FG+LL E+++G+
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 83.9 bits (208), Expect = 1e-17
 Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 23/213 (10%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQH 442
            + +     +G G +G V           +AVK+LS+   S    K    E+ L   ++H
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87

Query: 443 RNLVKLL------GCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
            N++ LL             +  L+   M    L++ +  Q   KL D   +F +I    
Sbjct: 88  ENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQ---KLTDDHVQF-LIYQIL 142

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    + T       V T  
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG-----YVATRW 194

Query: 557 YMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGK 588
           Y APE   +   ++   D++S G ++ E+++G+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 83.4 bits (207), Expect = 2e-17
 Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 33/217 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNE-IILFSKLQ 441
            +F + + +G G +  V    L     I A+K + K     ++ +  ++ E  +      
Sbjct: 9   QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68

Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFH---II 492
           H  LV L   C   E +L  + E++    L           +E         RF+   I 
Sbjct: 69  HPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA-------RFYSAEIS 120

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF-GGDETEGNTNRV 551
                 L YLH+     II+RDLK  NVLLD + + K++D+G+ +      +T   T+  
Sbjct: 121 LA----LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSTF 170

Query: 552 VGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            GT  Y+APE      +    D ++ G+L+ E+++G+
Sbjct: 171 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 83.4 bits (207), Expect = 2e-17
 Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 25/213 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNE-IILFSKLQ 441
           DNF   + LG+G FG V    + +  ++ AVK L K   + +  ++    E  IL     
Sbjct: 23  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82

Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFHIICGT 495
           H  L +L  CC    ++L  + EF+    L      S  FD+ R        RF+     
Sbjct: 83  HPFLTQLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARA-------RFYAAE-I 133

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              L++LH      II+RDLK  NVLLD + + K++DFG+ +    +     T    GT 
Sbjct: 134 ISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT--FCGTP 188

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            Y+APE   +  +    D ++ G+LL E++ G 
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 82.3 bits (204), Expect = 3e-17
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 40/228 (17%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN---EIILFSKLQ 441
              +   K LG GG G V+       ++ +A+K   KI     + +K+   EI +  +L 
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALREIKIIRRLD 66

Query: 442 HRNLVKLL----------GCCIHGEEKL----LIYEFMP---NKSLDSFIFDQERCKLLD 484
           H N+VK+              +    +L    ++ E+M       L+     +E  +L  
Sbjct: 67  HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-- 124

Query: 485 WSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGGDE 543
                  +    RGL Y+H  +   ++HRDLK +N+ ++ +D+  KI DFGLAR      
Sbjct: 125 ------FMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHY 175

Query: 544 TEGN--TNRVVGTYGYMAPE-YASDGQFSVKSDVFSFGILLLEIVSGK 588
           +     +  +V T  Y +P    S   ++   D+++ G +  E+++GK
Sbjct: 176 SHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 82.6 bits (205), Expect = 3e-17
 Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 27/213 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNE-IILFSKLQ 441
           ++F ++K LG+G FG V+        +  A+K L K   + +  ++    E  +L    +
Sbjct: 17  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76

Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFHIICGT 495
           H  L  +  C    +E L  + E++    L         FD  R         F+     
Sbjct: 77  HPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA-------TFYAAE-I 127

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF-GGDETEGNTNRVVGT 554
             GL +LH      I++RDLK  N+LLD+D + KI+DFG+ +    GD     TN   GT
Sbjct: 128 ILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNTFCGT 181

Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSG 587
             Y+APE     +++   D +SFG+LL E++ G
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 83.2 bits (206), Expect = 3e-17
 Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 31/216 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSK---ISEQGLKELKNE-IILFSKLQ 441
            +F + + +G G +  V    L     I A++ + K     ++ +  ++ E  +      
Sbjct: 52  QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111

Query: 442 HRNLVKLLGCCIHGEEKL-LIYEFMPNKSL-----DSFIFDQERCKLLDWSKRFH---II 492
           H  LV L   C   E +L  + E++    L           +E         RF+   I 
Sbjct: 112 HPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA-------RFYSAEIS 163

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
                 L YLH+     II+RDLK  NVLLD + + K++D+G+ +          T+   
Sbjct: 164 LA----LNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFC 214

Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           GT  Y+APE      +    D ++ G+L+ E+++G+
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 78.8 bits (195), Expect = 6e-16
 Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 30/222 (13%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGL-KELKNEIILFSKLQHR 443
           + +F +   LGEG +G V   T     + +A+K++    +         EI +    +H 
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69

Query: 444 NLVKLL-----GCCIHGEEKLLIYEFMP---NKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           N++ +          +  E  +I E M    ++ + + +   +  +        + I  T
Sbjct: 70  NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ--------YFIYQT 121

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV---- 551
            R +  LH  +   +IHRDLK SN+L++ + + K+ DFGLAR       + +        
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178

Query: 552 ----VGTYGYMAPEY-ASDGQFSVKSDVFSFGILLLEIVSGK 588
               V T  Y APE   +  ++S   DV+S G +L E+   +
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 78.3 bits (193), Expect = 2e-15
 Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 23/194 (11%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGL--KELKNEIILFSKLQH 442
            DN+ I   +G G +G VY       E+ +A+K+++++ E  +  K +  EI + ++L+ 
Sbjct: 25  PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS 84

Query: 443 RNLVKLLGCCI-----HGEEKLLIYEFMP---NKSLDSFI-FDQERCKLLDWSKRFHIIC 493
             +++L    I       +E  ++ E       K   + I   +E  K         I+ 
Sbjct: 85  DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIK--------TILY 136

Query: 494 GTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVG 553
               G  ++H      IIHRDLK +N LL+QD + K+ DFGLAR    ++     N +  
Sbjct: 137 NLLLGENFIH--ES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEE 193

Query: 554 TYGYMAPEYASDGQ 567
                        Q
Sbjct: 194 NEEPGPHNKNLKKQ 207

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 75.0 bits (185), Expect = 6e-15
 Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 30/177 (16%)

Query: 375 PLFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNE 433
              ++   A   D    ++ LG G  G V +      +++ A+K L         + + E
Sbjct: 6   SGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARRE 60

Query: 434 I-ILFSKLQHRNLVKLLGCC---IHGEEKL-LIYEFMPNKSLDSFIFD--QERCKLL--- 483
           + + +   Q  ++V+++        G + L ++ E +    L    F   Q+R       
Sbjct: 61  VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTE 116

Query: 484 -DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLA 536
            + S+    I      + YLH    + I HRD+K  N+L      +   K++DFG A
Sbjct: 117 REASEIMKSIGEA---IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 75.3 bits (184), Expect = 9e-15
 Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 52/202 (25%)

Query: 385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRL--------SKISEQGLKELKNEIIL 436
            T+     +K+GEG FG V++   AD   +A+K +        +   ++  +E+  EII+
Sbjct: 18  PTEKLQRCEKIGEGVFGEVFQTI-ADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 437 FSKLQ---------HRNLVKLLGCCI-----------------------------HGEEK 458
             +L              + L                                    +++
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136

Query: 459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKAS 518
           L I        +D    +Q R KL   +    I+      L        LR  HRDL   
Sbjct: 137 LFIVLEFEFGGID---LEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHWG 191

Query: 519 NVLLDQDMNPKISDFGLARAFG 540
           NVLL +    K+      ++  
Sbjct: 192 NVLLKKTSLKKLHYTLNGKSST 213

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 75.5 bits (186), Expect = 1e-14
 Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 40/232 (17%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGL--KELKNEIILFSKLQ- 441
              + + KKLG+G +G V+K       + +AVK++    +     +    EI++ ++L  
Sbjct: 8   LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67

Query: 442 HRNLVKLLGCCI--HGEEKLLIYEFMP---NKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
           H N+V LL      +  +  L++++M    +  + + I +    +        +++    
Sbjct: 68  HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQ--------YVVYQLI 119

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV----- 551
           + + YLH  S   ++HRD+K SN+LL+ + + K++DFGL+R+F       N   +     
Sbjct: 120 KVIKYLH--SG-GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176

Query: 552 --------------VGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGK 588
                         V T  Y APE      +++   D++S G +L EI+ GK
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 66.7 bits (163), Expect = 4e-12
 Identities = 23/201 (11%), Positives = 53/201 (26%), Gaps = 45/201 (22%)

Query: 394 KLGEGGFGPVYKGTLADEQ---EIAVKRL---SKISEQGLKELKNEIILFSKLQHRNLVK 447
             G       ++    D     ++A+  +     + +  L+E  +  +  S++    + +
Sbjct: 38  FHGGVPPLQFWQAL--DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95

Query: 448 LLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSR 507
           +L         L++ E++   SL                     +   A      H   R
Sbjct: 96  VLDVVHTRAGGLVVAEWIRGGSLQEVA--DTS---PSPVGAIRAMQSLAAAADAAH---R 147

Query: 508 LRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ 567
             +       S V +  D        G                V+     M         
Sbjct: 148 AGVALSIDHPSRVRVSID--------GDV--------------VLAYPATMPDA------ 179

Query: 568 FSVKSDVFSFGILLLEIVSGK 588
            + + D+   G  L  ++  +
Sbjct: 180 -NPQDDIRGIGASLYALLVNR 199

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 65.1 bits (159), Expect = 2e-11
 Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 42/225 (18%)

Query: 391 INKKLGEGGFGPVYKGT-LADEQEIAVKRL---SKISEQGLKELK-------NEIILFSK 439
           + +KLG G F  V+    + +   +A+K +      +E    E+K        +      
Sbjct: 23  LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 82

Query: 440 LQHRNLVKLLGCCIH-GEEKL---LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--IC 493
           +   +++KLL    H G   +   +++E +  ++L + I   E        +   +  + 
Sbjct: 83  MGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-------HRGIPLIYVK 134

Query: 494 GTAR----GLLYLHQDSRLRIIHRDLKASNVLLDQDMNP------KISDFGLARAFGGDE 543
             ++    GL Y+H   R  IIH D+K  NVL++   +P      KI+D G A       
Sbjct: 135 QISKQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC----WY 188

Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
            E  TN +  T  Y +PE      +   +D++S   L+ E+++G 
Sbjct: 189 DEHYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 62.1 bits (151), Expect = 2e-10
 Identities = 38/233 (16%), Positives = 82/233 (35%), Gaps = 31/233 (13%)

Query: 354 ENRNNRGTEQKNEDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQE 413
            + ++             +  P  ++       + + + KK+G GGFG +Y     ++ E
Sbjct: 5   HHHSSGVDLGTENLYFQSMPFPEGKVLDDMEG-NQWVLGKKIGSGGFGLIYLAFPTNKPE 63

Query: 414 IAVKRLSKISEQGLKELKNEIILFSKLQHRNLV----KLLGCCIHGEEKLLIYEFMPNKS 469
              + + K+  Q    L +E+  + ++  ++ +    +       G            K 
Sbjct: 64  KDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKG 123

Query: 470 LDSFIFDQERC-----KLLDWSKRFHI--ICGTARGLL----YLHQDSRLRIIHRDLKAS 518
                   ER      K+   +  F    +      +L    Y+H++     +H D+KA+
Sbjct: 124 RSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAA 180

Query: 519 NVLLDQDMNPKI--SDFGLARAFGGDET-----EGNTNRVVGTYGYMAPEYAS 564
           N+LL      ++  +D+GL+  +  +       E       GT      E+ S
Sbjct: 181 NLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGT-----IEFTS 228

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 25/164 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH-RN 444
           + + + +K+G G FG +Y GT +A  +E+A+K     ++     L  E  ++  +Q    
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ--LHIESKIYKMMQGGVG 66

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--ICGTARGLL-- 500
           +  +  C   G+  +++ E +   SL+        C     S++F +  +   A  ++  
Sbjct: 67  IPTIRWCGAEGDYNVMVMELL-GPSLEDLF---NFC-----SRKFSLKTVLLLADQMISR 117

Query: 501 --YLHQDSRLRIIHRDLKASNVLLDQDMNPK---ISDFGLARAF 539
             Y+H  +    IHRD+K  N L+          I DFGLA+ +
Sbjct: 118 IEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 25/164 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           + F + +K+G G FG +Y GT +   +E+A+K  +  ++     L  E  ++  LQ    
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ--LLYESKIYRILQGGTG 64

Query: 446 V-KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--ICGTARGLL-- 500
           +  +    + G+  +L+ + +   SL+        C     S++  +  +   A  ++  
Sbjct: 65  IPNVRWFGVEGDYNVLVMDLL-GPSLEDLF---NFC-----SRKLSLKTVLMLADQMINR 115

Query: 501 --YLHQDSRLRIIHRDLKASNVLLDQDMNPK---ISDFGLARAF 539
             ++H  S    +HRD+K  N L+          I DFGLA+ +
Sbjct: 116 VEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 57.8 bits (140), Expect = 5e-09
 Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 54/226 (23%)

Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRL---SKISEQGLKELKNEIILFSKLQHR- 443
           + + K +G+G FG V K       Q +A+K +    +   Q  +E++   IL   L+ + 
Sbjct: 99  YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR---IL-EHLRKQD 154

Query: 444 -----NLVKLLGC-------CIHGEEKLL---IYEFMPNKSLDSFIFDQERCKLLDWSKR 488
                N++ +L         C+  E  LL   +YE +       F     R         
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFE--LLSMNLYELIKKNKFQGFSLPLVR--------- 203

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEG 546
                   + L  LH   + RIIH DLK  N+LL Q      K+ DFG +  +       
Sbjct: 204 -KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-CY------- 251

Query: 547 NTNRVVGTY----GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             ++ V TY     Y APE     ++ +  D++S G +L E+++G 
Sbjct: 252 -EHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 57.1 bits (138), Expect = 8e-09
 Identities = 39/212 (18%), Positives = 72/212 (33%), Gaps = 53/212 (25%)

Query: 388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLS--KISEQGLKELKNEIILFSKLQHRNL 445
            + +   +G+GGFG +Y   +   + +        K+       L  E+  + +      
Sbjct: 36  AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQ 95

Query: 446 V---------------KLLGCCIHGEEKLLIYEFMP----NKSLDSFIFDQERCKLLDW- 485
           +               K  G  +H +     Y FM        L          K+ +  
Sbjct: 96  IQKWIRTRKLKYLGVPKYWGSGLHDKNGKS-YRFMIMDRFGSDLQ---------KIYEAN 145

Query: 486 SKRFHI--ICGTARGLL----YLHQDSRLRIIHRDLKASNVLLDQDMNPKI--SDFGLAR 537
           +KRF    +   +  +L    Y+H+      +H D+KASN+LL+     ++   D+GLA 
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLAY 202

Query: 538 AFGGDET-----EGNTNRVVGTYGYMAPEYAS 564
            +  +               GT      E+ S
Sbjct: 203 RYCPEGVHKAYAADPKRCHDGT-----IEFTS 229

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 56.6 bits (137), Expect = 8e-09
 Identities = 33/166 (19%), Positives = 79/166 (47%), Gaps = 27/166 (16%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH-RN 444
            ++ + +++GEG FG +++GT L + Q++A+K   + S+     L++E   +  L     
Sbjct: 10  VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQ--LRDEYRTYKLLAGCTG 67

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--ICGTARGLL-- 500
           +  +      G   +L+ + +   SL+  +   + C      ++F +  +   A+ +L  
Sbjct: 68  IPNVYYFGQEGLHNVLVIDLLG-PSLEDLL---DLC-----GRKFSVKTVAMAAKQMLAR 118

Query: 501 --YLHQDSRLRIIHRDLKASNVLLDQDMNPK-----ISDFGLARAF 539
              +H+ S   +++RD+K  N L+ +  +       + DFG+ + +
Sbjct: 119 VQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 57.0 bits (138), Expect = 9e-09
 Identities = 49/227 (21%), Positives = 82/227 (36%), Gaps = 48/227 (21%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVK---RLSKISEQGLKELKNEIILFSKLQ 441
            D + I+  +G+G FG V K     +++ +A+K          Q   E++   +L   + 
Sbjct: 53  MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVR---LL-ELMN 108

Query: 442 HR------NLVKLLGCCIHGE------EKLLI--YEFMPNKSLDSFIFDQERCKLLDWSK 487
                    +V L    +         E L    Y+ + N +      +  R        
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR-------- 160

Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETE 545
                      LL+L     L IIH DLK  N+LL        KI DFG +    G    
Sbjct: 161 --KFAQQMCTALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS-CQLGQR-- 214

Query: 546 GNTNRVVGTY----GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
                 +  Y     Y +PE      + +  D++S G +L+E+ +G+
Sbjct: 215 ------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 55.5 bits (134), Expect = 3e-08
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)

Query: 388 NFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH-RNL 445
           NF + KK+G G FG +  G  L   + +A+K     S     +L  E   + +L     +
Sbjct: 10  NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA--PQLHLEYRFYKQLGSGDGI 67

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHI--ICGTARGLL--- 500
            ++      G+   ++ E +   SL+  +FD   C      + F +  +   A  L+   
Sbjct: 68  PQVYYFGPCGKYNAMVLELL-GPSLED-LFDL--C-----DRTFSLKTVLMIAIQLISRM 118

Query: 501 -YLHQDSRLRIIHRDLKASNVLLDQDMNPK-----ISDFGLARAF 539
            Y+H  +   +I+RD+K  N L+ +  N       I DF LA+ +
Sbjct: 119 EYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 54.7 bits (132), Expect = 4e-08
 Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 45/208 (21%)

Query: 388 NFSINKKLGEGGFGPVYKGT---------LADEQEIAVKRLSKISEQGLKELK------- 431
            + +         G +Y+              +Q+ ++K L     +   E         
Sbjct: 43  QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK-LDAKDGRLFNEQNFFQRAAK 101

Query: 432 -NEIILFSKLQHRNLV---KLLGCCIHGEEKLLIYEFMP----NKSLDSFIFDQERCKLL 483
             ++  + KL    L+     +G  +H ++    Y F+      +SL S   D     +L
Sbjct: 102 PLQVNKWKKLYSTPLLAIPTCMGFGVHQDK----YRFLVLPSLGRSLQS-ALDVSPKHVL 156

Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI--SDFGLARAFGG 541
                  + C     L +LH++     +H ++ A N+ +D +   ++  + +G A  +  
Sbjct: 157 SERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCP 213

Query: 542 DET-----EGNTNRVVGTYGYMAPEYAS 564
                   EG+ +   G       E+ S
Sbjct: 214 SGKHVAYVEGSRSPHEGD-----LEFIS 236

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 53.8 bits (129), Expect = 1e-07
 Identities = 55/279 (19%), Positives = 93/279 (33%), Gaps = 100/279 (35%)

Query: 386 TDNFSINKKLGEGGFGPVYKGTLA-DEQE---IAVKRLSKISEQGLKELKNEIILFSKLQ 441
              + + +KLG G F  V+   L+ D Q    +A+K + K +E   +   +EI L   ++
Sbjct: 36  NGRYHVIRKLGWGHFSTVW---LSWDIQGKKFVAMK-VVKSAEHYTETALDEIRLLKSVR 91

Query: 442 --------HRNLVKLLGC-CIHGEE---KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
                      +V+LL    I G       +++E +                LL W  + 
Sbjct: 92  NSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-------------GHHLLKWIIKS 138

Query: 490 -----------HIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---------------- 522
                       II    +GL YLH  ++ RIIH D+K  N+LL                
Sbjct: 139 NYQGLPLPCVKKIIQQVLQGLDYLH--TKCRIIHTDIKPENILLSVNEQYIRRLAAEATE 196

Query: 523 ---------------------------------DQDMNPKISDFGLARAFGGDETEGNTN 549
                                             + +  KI+D G A       TE    
Sbjct: 197 WQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTE---- 252

Query: 550 RVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
             + T  Y + E      ++  +D++S   +  E+ +G 
Sbjct: 253 -DIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGD 290

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 50.0 bits (120), Expect = 1e-06
 Identities = 51/243 (20%), Positives = 85/243 (34%), Gaps = 64/243 (26%)

Query: 386 TDNFSINKKLGEGGFGPVYKG--TLADEQEIAVK---RLSKISEQGLKELKNEIILFSKL 440
            + + I   LGEG FG V +       + ++A+K    + K  E    E+    +L  K+
Sbjct: 18  QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEIN---VL-KKI 73

Query: 441 QHR------NLVKLLGC-------CIHGEEKLL---IYEFMPNKSLDSFIFDQERCKLLD 484
           + +        V +          CI  E  LL    +EF+   +   +     R     
Sbjct: 74  KEKDKENKFLCVLMSDWFNFHGHMCIAFE--LLGKNTFEFLKENNFQPYPLPHVR----- 126

Query: 485 WSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP---------------- 528
                H+       L +LH     ++ H DLK  N+L                       
Sbjct: 127 -----HMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN 178

Query: 529 ---KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIV 585
              +++DFG A  F  +    +   +V T  Y  PE   +  ++   DV+S G +L E  
Sbjct: 179 TSIRVADFGSA-TFDHE----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 233

Query: 586 SGK 588
            G 
Sbjct: 234 RGF 236

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 48.4 bits (116), Expect = 4e-06
 Identities = 55/236 (23%), Positives = 86/236 (36%), Gaps = 56/236 (23%)

Query: 389 FSINKKLGEGGFGPVYKG--TLADEQEIAVK---RLSKISEQGLKELKNEIILFSKLQHR 443
           + I   LGEG FG V +     A  + +AVK    + +  E    E++   +L   L   
Sbjct: 16  YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQ---VL-EHLNTT 71

Query: 444 ------NLVKLLGC-------CIHGEEKLL---IYEFMPNKSLDSFIFDQERCKLLDWSK 487
                   V++L         CI  E  LL    Y+F+       F  D  R        
Sbjct: 72  DPNSTFRCVQMLEWFEHHGHICIVFE--LLGLSTYDFIKENGFLPFRLDHIR-------- 121

Query: 488 RFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA--------- 538
              +     + + +LH     ++ H DLK  N+L  Q    +  +  + R          
Sbjct: 122 --KMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI 176

Query: 539 ----FGG--DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
               FG    + E + + +V T  Y APE      +S   DV+S G +L+E   G 
Sbjct: 177 KVVDFGSATYDDE-HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 231

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 48.5 bits (116), Expect = 4e-06
 Identities = 54/239 (22%), Positives = 88/239 (36%), Gaps = 58/239 (24%)

Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVK---RLSKISEQGLKELKNEIILFSKLQHR- 443
           F + +K+G+G FG V     + +++  AVK    + K +     E     IL  K+Q+  
Sbjct: 37  FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEAD---IL-KKIQNDD 92

Query: 444 ----NLVKLLGC-------CIHGEEKLL---IYEFMPNKSLDSFIFDQERCKLLDWSKRF 489
               N+VK  G        C+  E   L   +YE +   + + F  +  +          
Sbjct: 93  INNNNIVKYHGKFMYYDHMCLIFE--PLGPSLYEIITRNNYNGFHIEDIK---------- 140

Query: 490 HIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN 549
                  + L YL    ++ + H DLK  N+LLD     K          G       T 
Sbjct: 141 LYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK 197

Query: 550 R--------------------VVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
                                ++ T  Y APE   +  + V SD++SFG +L E+ +G 
Sbjct: 198 STGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 3e-04
 Identities = 85/624 (13%), Positives = 162/624 (25%), Gaps = 183/624 (29%)

Query: 40  LLPGMKLGWDLK--TGLERRITSWKSPDD----PSPGNFT----WAVERQDNPELIMWKG 89
                   +D K    + + I S +  D         + T    W +  +        + 
Sbjct: 25  FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE------EM 78

Query: 90  SRKFYRSG-----PWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMN 144
            +KF          +          RQ  +    ++   D LY    +  K   SR+   
Sbjct: 79  VQKFVEEVLRINYKFLMSPIKTEQ-RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY 137

Query: 145 QTLYLRQRFTWKKATQNWELQLNVPRDLCDTYALCGDYGI---CIISDLPVCQCLKGFKP 201
             L            +   L+L   +++     + G  G     +  D  VC   K  + 
Sbjct: 138 LKL------------RQALLELRPAKNV----LIDGVLGSGKTWVALD--VCLSYK-VQC 178

Query: 202 KSRGYVDW-SQG-CVRDKSL-------------NY-SREDGFIK---------------F 230
           K    + W +   C   +++             N+ SR D                    
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 231 TAMKLP-------DATPSWVSKSMNLKECREKCL---ENSSCMAYTNSDIRGGGSGCAMW 280
            +           +   +    + NL  C  K L             +D     +   + 
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLS-C--KILLTTRFKQ-----VTDFLSAATTTHI- 289

Query: 281 FGELIDMRD-F-PDGGQDL---YIRMSASELGAKGEP--TTKIVLIVISTAALLAVVIAA 333
              L        PD  + L   Y+     +L     P          +S       +IA 
Sbjct: 290 --SLDHHSMTLTPDEVKSLLLKYLDCRPQDL-----PREVLTTNPRRLS-------IIAE 335

Query: 334 GYLIHKSRRNIVVNIARYFRENRNNRGT---EQKNEDQNIDLDLPLFELATIANATDNFS 390
                 +  +        ++    ++ T   E             +F+  ++      F 
Sbjct: 336 SIRDGLATWD-------NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV------FP 382

Query: 391 INKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS--EQGLKELKNEI--ILFSKLQHRNLV 446
            +  +       ++   +  +  + V +L K S  E+  KE    I  I           
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE 442

Query: 447 KLLGCCIHGEEKLLI--YEF--------MPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             L    H   + ++  Y          +    LD + +              HI  G  
Sbjct: 443 YAL----H---RSIVDHYNIPKTFDSDDLIPPYLDQYFY-------------SHI--G-- 478

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDETEGNTNRVVGTY 555
               + H    +    R      V LD   +  KI     A    G     NT + +  Y
Sbjct: 479 ----H-HL-KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL--NTLQQLKFY 530

Query: 556 -GYMAPEYASDGQFSVK-SDVFSF 577
             Y+     +D ++    + +  F
Sbjct: 531 KPYICD---NDPKYERLVNAILDF 551

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	706
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.92
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.88
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.85
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	99.79
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.76
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.66
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.36
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.17
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.1
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.98
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	98.94
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	98.93
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	98.93
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.9
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.6
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.48
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.45
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.4
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.34
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.29
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.02
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.98
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.77
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.71
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.69
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	97.6
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	97.48
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	97.46
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	97.45
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.44
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	97.41
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.39
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	97.37
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.33
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.27
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.24
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.22
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	97.2
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.19
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	97.19
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	97.14
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	97.14
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.01
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	96.96
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	96.83
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.73
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	96.68
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.65
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.3
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	96.25
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	96.11
3mes_A	424	Choline kinase; malaria, structural genomics, stru	95.84
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	95.26
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	94.48
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.75
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	89.29
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	87.72
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	81.95
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	81.85
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	81.13

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.6e-53  Score=445.86  Aligned_cols=261  Identities=27%  Similarity=0.423  Sum_probs=207.7

Q ss_pred             cCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|.+.++||+|+||+||+|++.      +++.||||+++.......++|.+|+.++++++|||||+++++|.+.+..+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            56788899999999999999864      367899999988777788899999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccc------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          461 IYEFMPNKSLDSFIFDQER------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      |||||++|+|.++|+....            ...++|.++++|+.|||+||+|||+.+   ||||||||+||||++++++
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence            9999999999999975421            245899999999999999999999987   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+|||+|+.+.............||+.|||||++.+..++.++|||||||+||||+| |+.||.....   .+.+....
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~~i~  274 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN---TEAIDCIT  274 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH---HHHHHHHH
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH---HHHHHHHH
Confidence            9999999997754444444445679999999999999999999999999999999999 8999864322   22222221


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCC
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVL  666 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~  666 (706)
                          .+.......     ..+    ..+.+|+.+||+.||++||||+||++.|+.+...
T Consensus       275 ----~g~~~~~p~-----~~~----~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          275 ----QGRELERPR-----ACP----PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             ----HTCCCCCCT-----TCC----HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             ----cCCCCCCcc-----ccc----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence                111111111     111    2466799999999999999999999999987543

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=9.7e-54  Score=441.46  Aligned_cols=258  Identities=28%  Similarity=0.456  Sum_probs=213.4

Q ss_pred             cCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|.+.++||+|+||+||+|++.      +++.||||+++.......++|.+|+.++++++|||||+++++|.+++..++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            57888999999999999999864      367899999988777778899999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhccc----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          461 IYEFMPNKSLDSFIFDQE----------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                      |||||++|+|.++|+...          ....++|..+++|+.|||+||+|||+++   |+||||||+||||++++++||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence            999999999999997532          2356999999999999999999999987   999999999999999999999


Q ss_pred             eeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHH
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKL  609 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~  609 (706)
                      +|||+|+...............||+.|||||++.+..++.++|||||||+||||+| |+.||.....   .+......  
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~~i~--  244 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVIECIT--  244 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---HHHHHHHH--
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHH--
Confidence            99999997654433333444679999999999999999999999999999999999 8999864332   22222221  


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                        .+.......     ..    ...+.+|+.+||+.||++||||+||++.|+.+
T Consensus       245 --~~~~~~~p~-----~~----~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~  287 (299)
T 4asz_A          245 --QGRVLQRPR-----TC----PQEVYELMLGCWQREPHMRKNIKGIHTLLQNL  287 (299)
T ss_dssp             --HTCCCCCCT-----TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --cCCCCCCCc-----cc----hHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence              222111111     11    12466899999999999999999999999875

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-52  Score=432.46  Aligned_cols=258  Identities=27%  Similarity=0.446  Sum_probs=201.1

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      +++++.++||+|+||+||+|++++  .||||+++.  ......+.|.+|+.++++++|||||++++++.+ +..+|||||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy  112 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW  112 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence            678899999999999999999754  599999864  345667889999999999999999999998854 578999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      |++|+|.++|+...  ..+++..+++|+.|||+||+|||+++   ||||||||+||||++++++||+|||+|+.......
T Consensus       113 ~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~  187 (307)
T 3omv_A          113 CEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG  187 (307)
T ss_dssp             CSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred             CCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence            99999999996543  45899999999999999999999987   99999999999999999999999999987654333


Q ss_pred             cccccccccccCccCcccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASD---GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      .......+||+.|||||++.+   ..|+.++|||||||+||||+||+.||......  .............+....+.. 
T Consensus       188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~-  264 (307)
T 3omv_A          188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIFMVGRGYASPDLSKLYK-  264 (307)
T ss_dssp             ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHTTCCCCCSTTSCT-
T ss_pred             ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--HHHHHHHhcCCCCCCcccccc-
Confidence            334455789999999999964   46899999999999999999999998543221  111111111111111111111 


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                          ..    ...+.+|+.+||+.||++||||.||++.|+.+
T Consensus       265 ----~~----~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l  298 (307)
T 3omv_A          265 ----NC----PKAMKRLVADCVKKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             ----TS----CHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred             ----cc----hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                11    13466789999999999999999999998754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=7.3e-53  Score=436.81  Aligned_cols=258  Identities=27%  Similarity=0.426  Sum_probs=210.8

Q ss_pred             cCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      +++++.++||+|+||+||+|++.      +++.||||+++.. .....++|.+|+.++++++|||||+++|+|.+.+..+
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            45677899999999999999863      4678999999753 3344678999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC
Q 005236          460 LIYEFMPNKSLDSFIFDQE-------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM  526 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~  526 (706)
                      +|||||++|+|.++|....             ....++|..+++|+.|||+||+|||+++   ||||||||+||||++++
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCC
Confidence            9999999999999996532             1245899999999999999999999988   99999999999999999


Q ss_pred             CeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHH
Q 005236          527 NPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRH  605 (706)
Q Consensus       527 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~  605 (706)
                      ++||+|||+|+.+.............||+.|||||++.+..++.++|||||||+||||+| |+.||.....   .+.+..
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~---~~~~~~  259 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QDVVEM  259 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH---HHHHHH
T ss_pred             CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH---HHHHHH
Confidence            999999999997654443334445689999999999999999999999999999999999 8999764332   222222


Q ss_pred             HHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       606 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                          +..+......+     ..    ...+.+|+.+||+.||.+||||+||++.|+..
T Consensus       260 ----i~~~~~~~~p~-----~~----~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          260 ----IRNRQVLPCPD-----DC----PAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             ----HHTTCCCCCCT-----TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             ----HHcCCCCCCcc-----cc----hHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                22222222111     11    13466899999999999999999999999854

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=7.5e-51  Score=425.68  Aligned_cols=250  Identities=21%  Similarity=0.349  Sum_probs=201.0

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.++||+|+||+||+|+.. +++.||||++..  ......+.+.+|+.++++++|||||++++++.+.+..|+|||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            68999999999999999999984 589999999864  345567789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      ||++|+|.++|.... ...+++..++.|+.||+.||+|||+++   |+||||||+||||++++++||+|||+|+.+... 
T Consensus       104 y~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-  178 (350)
T 4b9d_A          104 YCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-  178 (350)
T ss_dssp             CCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred             CCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC-
Confidence            999999999996543 345788899999999999999999998   999999999999999999999999999875321 


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                       .......+||+.|||||++.+..|+.++|||||||+||||++|+.||....   .......   ..... ...+.    
T Consensus       179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~---~~~~~~~---i~~~~-~~~~~----  246 (350)
T 4b9d_A          179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS---MKNLVLK---IISGS-FPPVS----  246 (350)
T ss_dssp             -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHH---HHHTC-CCCCC----
T ss_pred             -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC---HHHHHHH---HHcCC-CCCCC----
Confidence             112334679999999999999999999999999999999999999985422   2222222   22221 11111    


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ...+    ..+.+|+.+||+.||.+|||++|+++
T Consensus       247 -~~~s----~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          247 -LHYS----YDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             -TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -ccCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence             1111    24567899999999999999999986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.4e-50  Score=422.90  Aligned_cols=249  Identities=24%  Similarity=0.376  Sum_probs=206.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      +.|++.++||+|+||+||+|+.. +|+.||||++........+.+.+|+.++++++|||||++++++.+++..|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            56999999999999999999985 58999999997655555677899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++|+|.+++.+    ..+++..+..++.||+.||+|||+++   |+||||||+||||+.++++||+|||+|+.+....  
T Consensus       154 ~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--  224 (346)
T 4fih_A          154 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--  224 (346)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--
T ss_pred             CCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC--
Confidence            99999999854    34899999999999999999999998   9999999999999999999999999999864332  


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......+||+.|||||++.+..|+.++|||||||+||||++|+.||....   .........    ......+..  + .
T Consensus       225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~---~~~~~~~i~----~~~~~~~~~--~-~  294 (346)
T 4fih_A          225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP---PLKAMKMIR----DNLPPRLKN--L-H  294 (346)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC---HHHHHHHHH----HSSCCCCSC--G-G
T ss_pred             CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC---HHHHHHHHH----cCCCCCCCc--c-c
Confidence            22344789999999999999999999999999999999999999985422   222222221    111111100  0 0


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..+    ..+.+|+.+||+.||++|||++|+++
T Consensus       295 ~~s----~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          295 KVS----PSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             GSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111    24567899999999999999999876

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3e-51  Score=421.62  Aligned_cols=248  Identities=25%  Similarity=0.323  Sum_probs=207.9

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||+||+|+.. +++.||||++.+.   .....+.+.+|+.++++++|||||++++++.+.+..|+||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            57999999999999999999984 5889999999653   2344678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.++|.+.   ..+++..+..++.||+.||+|||+++   |+||||||+||||+.++++||+|||+|+.+...
T Consensus       112 Ey~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence            999999999999654   35899999999999999999999998   999999999999999999999999999987655


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .........+||+.|||||++.+..|+.++||||+||+||||++|+.||....   .........   .. .. .+    
T Consensus       186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~---~~~~~~~i~---~~-~~-~~----  253 (311)
T 4aw0_A          186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN---EGLIFAKII---KL-EY-DF----  253 (311)
T ss_dssp             TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHH---HT-CC-CC----
T ss_pred             CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHH---cC-CC-CC----
Confidence            44445556789999999999999999999999999999999999999985422   222222221   11 11 01    


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                       ....+    ..+.+|+.+||+.||.+|||++|++
T Consensus       254 -p~~~s----~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          254 -PEKFF----PKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             -CTTCC----HHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             -CcccC----HHHHHHHHHHccCCHhHCcChHHHc
Confidence             01112    2456799999999999999999963

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.8e-50  Score=426.22  Aligned_cols=268  Identities=28%  Similarity=0.410  Sum_probs=215.5

Q ss_pred             HHHHHHhccCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCC-cceeeeEe
Q 005236          379 LATIANATDNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQH-RNLVKLLG  450 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h-~niv~l~~  450 (706)
                      ..+.....++|++.++||+|+||+||+|++..      ++.||||++... .....+.|.+|+.++.+++| ||||++++
T Consensus        56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g  135 (353)
T 4ase_A           56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG  135 (353)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence            34444456889999999999999999998643      357999999763 34456789999999999965 89999999


Q ss_pred             EEEeC-CeeEEEEecCCCCChhhhhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccC
Q 005236          451 CCIHG-EEKLLIYEFMPNKSLDSFIFDQER-------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLK  516 (706)
Q Consensus       451 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik  516 (706)
                      +|.+. +..++|||||++|+|.++|+....             ...+++..++.++.|||+||+|||+++   |||||||
T Consensus       136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK  212 (353)
T 4ase_A          136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLA  212 (353)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCS
T ss_pred             EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccC
Confidence            99764 568999999999999999975432             245899999999999999999999988   9999999


Q ss_pred             CCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCC
Q 005236          517 ASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYH  595 (706)
Q Consensus       517 p~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~  595 (706)
                      |+||||++++.+||+|||+|+.+..+..........||+.|||||++.+..|+.++|||||||+||||+| |+.||....
T Consensus       213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~  292 (353)
T 4ase_A          213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  292 (353)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999998765554444555789999999999999999999999999999999998 899986433


Q ss_pred             CCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          596 SDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      ...  ....    .+..+......+     ..+    ..+.+++.+||+.||.+|||++||++.|+.+.
T Consensus       293 ~~~--~~~~----~i~~g~~~~~p~-----~~~----~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll  346 (353)
T 4ase_A          293 IDE--EFCR----RLKEGTRMRAPD-----YTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  346 (353)
T ss_dssp             CSH--HHHH----HHHHTCCCCCCT-----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHH--HHHH----HHHcCCCCCCCc-----cCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            221  1111    122222111111     111    24667899999999999999999999998653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=4.3e-50  Score=418.05  Aligned_cols=252  Identities=23%  Similarity=0.269  Sum_probs=203.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .+.|++.++||+|+||.||+|++. .|+.||||+++....     ..+|+.++++++|||||++++++.+++..+|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            356888899999999999999985 589999999865321     24699999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-CeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfgla~~~~~~~  543 (706)
                      |+||+|.++|.+.   ..+++..+..++.||+.||+|||+++   ||||||||+||||+.++ ++||+|||+|+.+..+.
T Consensus       132 ~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          132 LEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             CTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred             cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence            9999999999654   35899999999999999999999988   99999999999999988 69999999999875432


Q ss_pred             Ccc---cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC-cccc
Q 005236          544 TEG---NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP-SQLI  619 (706)
Q Consensus       544 ~~~---~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  619 (706)
                      ...   .....+||+.|||||++.+..++.++|||||||+||||++|+.||...........+.      ..... .++.
T Consensus       206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~------~~~~~~~~~~  279 (336)
T 4g3f_A          206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA------SEPPPIREIP  279 (336)
T ss_dssp             --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH------HSCCGGGGSC
T ss_pred             cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH------cCCCCchhcC
Confidence            211   2234679999999999999999999999999999999999999987544433322221      11111 1111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                           ...+    ..+.+++.+||+.||.+|||+.||++.|...
T Consensus       280 -----~~~s----~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          280 -----PSCA----PLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             -----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----ccCC----HHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence                 1111    2456788999999999999999999887643

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.5e-50  Score=416.84  Aligned_cols=268  Identities=23%  Similarity=0.277  Sum_probs=200.9

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC----eeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE----EKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV~  462 (706)
                      ++|.+.++||+|+||+||+|++ .|+.||||++...... ...++.|+..+.+++|||||++++++.+.+    .++|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            4678889999999999999998 5889999999654322 223345666778899999999999998764    579999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      |||++|+|.++|+..    .++|..+++++.|+++||+|||++     ..++|+||||||+||||++++++||+|||+|+
T Consensus        81 Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A           81 DYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             ECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             cCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence            999999999999643    489999999999999999999986     13359999999999999999999999999998


Q ss_pred             ccCCCCCc--ccccccccccCccCccccccC------CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc--------hh
Q 005236          538 AFGGDETE--GNTNRVVGTYGYMAPEYASDG------QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK--------LN  601 (706)
Q Consensus       538 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~--------~~  601 (706)
                      ........  ......+||+.|||||++.+.      .++.++|||||||+||||+||+.|+........        ..
T Consensus       157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~  236 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence            76443222  223346799999999999764      467899999999999999999887643221110        01


Q ss_pred             HHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..............+.-+..   ...+.+....+.+++.+||+.||++||||.||++.|+.+
T Consensus       237 ~~~~~~~~~~~~~~rp~~p~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l  295 (303)
T 3hmm_A          237 SVEEMRKVVCEQKLRPNIPN---RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             CHHHHHHHHTTSCCCCCCCG---GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHhcccCCCCCCc---cccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            11122222222222111111   112234556678899999999999999999999999865

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=3.2e-49  Score=404.71  Aligned_cols=246  Identities=24%  Similarity=0.384  Sum_probs=196.5

Q ss_pred             CccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe----CCeeEEEE
Q 005236          390 SINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH----GEEKLLIY  462 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~  462 (706)
                      ++.++||+|+||+||+|++. .++.||||++..  ......+.|.+|+.++++++|||||++++++.+    +...+|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            66788999999999999985 488999999864  345556789999999999999999999999875    34579999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-CCCCeEEeeeccccccCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~kl~Dfgla~~~~~  541 (706)
                      |||++|+|.++|.+.   ..+++..+..++.||+.||+|||+++ .+|+||||||+||||+ .++.+||+|||+|+....
T Consensus       109 Ey~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             ECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            999999999999653   45899999999999999999999875 3599999999999998 479999999999986432


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                          ......+||+.|||||++.+ .|+.++|||||||+||||+||+.||.....  ...    .......+..+..++.
T Consensus       185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~--~~~----~~~~i~~~~~~~~~~~  253 (290)
T 3fpq_A          185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQ----IYRRVTSGVKPASFDK  253 (290)
T ss_dssp             ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHH----HHHHHTTTCCCGGGGG
T ss_pred             ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--HHH----HHHHHHcCCCCCCCCc
Confidence                22334689999999998865 699999999999999999999999853221  111    1122222222111111


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                          ...    ..+.+|+.+||+.||.+|||++|+++
T Consensus       254 ----~~~----~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          254 ----VAI----PEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ----CCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----cCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence                111    13567899999999999999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.4e-49  Score=423.72  Aligned_cols=249  Identities=24%  Similarity=0.376  Sum_probs=206.6

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      +.|++.++||+|+||.||+|+.. +|+.||||++........+.+.+|+.+|++++|||||++++++.+++.+|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            57999999999999999999985 58999999997655555677899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++|+|.+++..    ..+++..+..++.||+.||+|||+++   ||||||||+||||+.+|++||+|||+|+.+....  
T Consensus       231 ~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--  301 (423)
T 4fie_A          231 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--  301 (423)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--
T ss_pred             CCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC--
Confidence            99999999854    34899999999999999999999998   9999999999999999999999999999864332  


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......+||+.|||||++.+..|+.++|||||||++|||++|+.||...   ..........    ......+..  + .
T Consensus       302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~---~~~~~~~~i~----~~~~~~~~~--~-~  371 (423)
T 4fie_A          302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---PPLKAMKMIR----DNLPPRLKN--L-H  371 (423)
T ss_dssp             CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS---CHHHHHHHHH----HSCCCCCSC--T-T
T ss_pred             ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc---CHHHHHHHHH----cCCCCCCcc--c-c
Confidence            2234578999999999999999999999999999999999999998532   2222222221    111111100  0 0


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..+    ..+.+|+.+||+.||.+|||++|+++
T Consensus       372 ~~s----~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          372 KVS----PSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             SSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111    24567899999999999999999876

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.1e-49  Score=402.48  Aligned_cols=246  Identities=24%  Similarity=0.369  Sum_probs=188.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||+||+|+.. +++.||||++.+.   .....+.+.+|+.++++++|||||++++++.+.+..++|
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            368999999999999999999974 5899999998653   233456799999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+ +|+|.++|.+.   ..+++..+..++.||+.||+|||+++   |+||||||+||||++++++||+|||+|+....
T Consensus        92 mEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             EECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred             EeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence            9999 68999998654   35899999999999999999999998   99999999999999999999999999987543


Q ss_pred             CCCcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ..   .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||...   .........    ...... + .
T Consensus       165 ~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~---~~~~~~~~i----~~~~~~-~-p  232 (275)
T 3hyh_A          165 GN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE---SIPVLFKNI----SNGVYT-L-P  232 (275)
T ss_dssp             -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS---SHHHHHHHH----HHTCCC-C-C
T ss_pred             CC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC---CHHHHHHHH----HcCCCC-C-C
Confidence            22   2234689999999999998876 57999999999999999999998532   222222221    111110 0 0


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                          ...+    ..+.+++.+||+.||++|||++|+++
T Consensus       233 ----~~~s----~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          233 ----KFLS----PGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             ----TTSC----HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ----CCCC----HHHHHHHHHHccCChhHCcCHHHHHc
Confidence                1112    24567899999999999999999987

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=9.2e-50  Score=410.65  Aligned_cols=247  Identities=24%  Similarity=0.296  Sum_probs=193.9

Q ss_pred             cCCCccceeccCCceeEEEEEeC----CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.++||+|+||+||+|+..    .++.||||++.+.  .......+.+|+.++++++|||||++++++.+.+..++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            57999999999999999999862    3678999998653  22334568889999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||++||+|.++|.+.   ..+++..+..++.||+.||+|||+++   |+||||||+|||+++++++||+|||+|+...
T Consensus       104 vmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             EECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             EEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            99999999999999654   35899999999999999999999998   9999999999999999999999999998653


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ...  ......+||+.|||||++.+..++.++|||||||+||||++|+.||....   .........   .. .. .+  
T Consensus       178 ~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~---~~~~~~~i~---~~-~~-~~--  245 (304)
T 3ubd_A          178 DHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD---RKETMTMIL---KA-KL-GM--  245 (304)
T ss_dssp             -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHH---HC-CC-CC--
T ss_pred             CCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC---HHHHHHHHH---cC-CC-CC--
Confidence            322  22334689999999999999999999999999999999999999985422   222222221   11 11 00  


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh-----hHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM-----PSVIL  658 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~-----~ev~~  658 (706)
                         ....+    ..+.+++.+||+.||++|||+     +|+++
T Consensus       246 ---p~~~s----~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          246 ---PQFLS----PEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             ---CTTSC----HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             ---CCcCC----HHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence               01112    245678999999999999985     56653

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=4.2e-48  Score=400.00  Aligned_cols=251  Identities=25%  Similarity=0.378  Sum_probs=190.8

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC--------
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE--------  456 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------  456 (706)
                      ++|++.+.||+|+||+||+|+.. +++.||||++... .....+.+.+|+.++++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            46899999999999999999984 5889999998653 3445578999999999999999999999987654        


Q ss_pred             ----eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          457 ----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       457 ----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                          ..++||||+++|+|.+++.........++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence                36899999999999999977665566777888999999999999999998   99999999999999999999999


Q ss_pred             eccccccCCCCCcc----------cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhH
Q 005236          533 FGLARAFGGDETEG----------NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL  602 (706)
Q Consensus       533 fgla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~  602 (706)
                      ||+|+.+.......          .....+||+.|||||++.+..|+.++|||||||++|||++   ||..     ..+.
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~-----~~~~  233 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST-----QMER  233 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS-----HHHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC-----ccHH
Confidence            99999875432211          1233579999999999999999999999999999999996   5431     1111


Q ss_pred             HHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       603 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .... ........+....         .....+.+++.+||+.||.+|||+.|+++
T Consensus       234 ~~~~-~~~~~~~~p~~~~---------~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          234 VRTL-TDVRNLKFPPLFT---------QKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHH-HHHHTTCCCHHHH---------HHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHH-HHHhcCCCCCCCc---------ccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1111 1112222221111         11123456889999999999999999987

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.3e-45  Score=388.34  Aligned_cols=285  Identities=35%  Similarity=0.596  Sum_probs=245.6

Q ss_pred             HHHHHHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          379 LATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      +.++...+++|++.+.||+|+||.||+|++.+++.||||++........+.+.+|+.++++++||||+++++++.+.+..
T Consensus        31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  110 (321)
T 2qkw_B           31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM  110 (321)
T ss_dssp             CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred             HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence            33445577899999999999999999999988999999999876666778899999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQER-CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      ++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  187 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK  187 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccccc
Confidence            999999999999999965432 235899999999999999999999988   9999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ...............||+.|+|||++.+..++.++||||||+++|||++|+.||......+......+.......+....
T Consensus       188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (321)
T 2qkw_B          188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ  267 (321)
T ss_dssp             ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS
T ss_pred             ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH
Confidence            75433333333445689999999999999999999999999999999999999977666666666666555555666667


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCC
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVL  666 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~  666 (706)
                      ++++.+...........+.+++.+||+.||++|||++||++.|+.+..+
T Consensus       268 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             SSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             hcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            7777776677778888899999999999999999999999999876443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-45  Score=393.79  Aligned_cols=261  Identities=20%  Similarity=0.317  Sum_probs=200.4

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEe------CCe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIH------GEE  457 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~  457 (706)
                      ++|++.++||+|+||+||+|+.. +|+.||||++...  .....+.+.+|+.+|++++|||||++++++..      ...
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            68999999999999999999984 5899999999653  34456778899999999999999999998764      357


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .|+|||||+ |+|.++|...   ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~  206 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR  206 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceee
Confidence            899999996 6799998543   45899999999999999999999998   9999999999999999999999999999


Q ss_pred             ccCCCCC--cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          538 AFGGDET--EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       538 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      .+.....  .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.....   ...............
T Consensus       207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~---~~~l~~I~~~~g~p~  283 (398)
T 4b99_A          207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY---VHQLQLIMMVLGTPS  283 (398)
T ss_dssp             CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH---HHHHHHHHHHHCCCC
T ss_pred             ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH---HHHHHHHHHhcCCCC
Confidence            7643322  2233457899999999998875 569999999999999999999999864332   222222222111111


Q ss_pred             Ccccccc------------cc-cCcCCHHH-----HHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          615 PSQLIDA------------CF-KDSFNLAE-----VIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       615 ~~~~~d~------------~~-~~~~~~~~-----~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      . .....            .. .....+..     ...+.+|+.+||+.||.+|||++|+++
T Consensus       284 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          284 P-AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             G-GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             h-HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0 00000            00 00111111     124678999999999999999999876

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.9e-44  Score=382.86  Aligned_cols=198  Identities=25%  Similarity=0.395  Sum_probs=170.0

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC----CCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCee
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  458 (706)
                      ...+.|++.++||+|+||+||+|+.+    .++.||||++....  ....+.+|+.+++.+ +|||||++++++.+.+..
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            45678999999999999999999863    46789999986543  345678999999998 699999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-CCeEEeeecccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLAR  537 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~Dfgla~  537 (706)
                      ++||||+++|+|.+++.      .+++.++..++.||+.||+|||+++   |+||||||+|||++.+ +.+||+|||+|+
T Consensus        96 ~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~  166 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQ  166 (361)
T ss_dssp             EEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence            99999999999999983      3889999999999999999999998   9999999999999877 799999999998


Q ss_pred             ccCCCCCc--------------------------ccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCC
Q 005236          538 AFGGDETE--------------------------GNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKN  590 (706)
Q Consensus       538 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p  590 (706)
                      ........                          ......+||+.|||||++.+. .++.++||||+||++|||++|+.|
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P  246 (361)
T 4f9c_A          167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP  246 (361)
T ss_dssp             ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred             ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence            65432111                          012235799999999999875 589999999999999999999999


Q ss_pred             CC
Q 005236          591 RG  592 (706)
Q Consensus       591 ~~  592 (706)
                      |.
T Consensus       247 f~  248 (361)
T 4f9c_A          247 FY  248 (361)
T ss_dssp             SS
T ss_pred             CC
Confidence            74

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=3.8e-44  Score=377.99  Aligned_cols=289  Identities=40%  Similarity=0.669  Sum_probs=243.3

Q ss_pred             CCcccHHHHHHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccch-hhHHHHHHHHHHHhhcCCcceeeeEeEE
Q 005236          374 LPLFELATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISE-QGLKELKNEIILFSKLQHRNLVKLLGCC  452 (706)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~  452 (706)
                      ...+++.++....++|++.+.||+|+||.||+|+..+++.||||++..... .....+.+|+.++++++||||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            445788899999999999999999999999999988899999999875432 2234689999999999999999999999


Q ss_pred             EeCCeeEEEEecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEe
Q 005236          453 IHGEEKLLIYEFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS  531 (706)
Q Consensus       453 ~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~  531 (706)
                      ......++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+....+|+||||||+|||++.++.+||+
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~  176 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG  176 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence            99999999999999999999997654 23458999999999999999999999822239999999999999999999999


Q ss_pred             eeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCC--CCCCchhHHHHHHHH
Q 005236          532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFY--HSDNKLNLIRHAWKL  609 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~--~~~~~~~~~~~~~~~  609 (706)
                      |||+++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...  ..........+....
T Consensus       177 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  255 (326)
T 3uim_A          177 DFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL  255 (326)
T ss_dssp             CCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred             cCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence            9999987643322 2233356999999999999999999999999999999999999998532  222333445555555


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ........+.+..+...........+.+++.+||+.||.+|||++||+++|++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            566666777777777778888888999999999999999999999999999875

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.7e-44  Score=406.26  Aligned_cols=252  Identities=23%  Similarity=0.330  Sum_probs=207.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.++||+|+||.||+|+.+ +|+.||||++........+.+.+|+.+|+.++|||||++++++.+....++||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            368999999999999999999985 5899999999776666778899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC--CCeEEeeeccccccCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD--MNPKISDFGLARAFGGD  542 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~--~~~kl~Dfgla~~~~~~  542 (706)
                      |++|+|.++|...  ...+++..+..++.||+.||+|||+++   |+||||||+|||++.+  +.+||+|||+|+.+...
T Consensus       236 ~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          236 MSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             CCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred             cCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence            9999999999543  245889999999999999999999998   9999999999999854  89999999999987433


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .   .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.....   ........    .... .+.+..
T Consensus       311 ~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~---~~~~~~i~----~~~~-~~~~~~  379 (573)
T 3uto_A          311 Q---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND---DETLRNVK----SCDW-NMDDSA  379 (573)
T ss_dssp             S---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH---HHHHHHHH----TTCC-CCCSGG
T ss_pred             C---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH---HHHHHHHH----hCCC-CCCccc
Confidence            2   23346799999999999999999999999999999999999999854322   22222111    1111 000111


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      + ...+    ..+.+|+.+||+.||.+|||+.|+++
T Consensus       380 ~-~~~s----~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          380 F-SGIS----EDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             G-TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             c-cCCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1 1111    24567899999999999999999987

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=9.5e-44  Score=396.96  Aligned_cols=249  Identities=25%  Similarity=0.307  Sum_probs=197.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHH---HHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKEL---KNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      .++|++.++||+|+||.||+|+.. +|+.||||++.+..   ......+   +.++.+++.++|||||++++++.+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            368999999999999999999985 58899999986521   1222233   3446677788999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      |+||||++||+|.++|.+.   ..+++..+..++.||+.||+|||+++   ||||||||+||||+.+|++||+|||+|+.
T Consensus       268 ylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~  341 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACD  341 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeee
Confidence            9999999999999999654   35899999999999999999999988   99999999999999999999999999997


Q ss_pred             cCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      +...    .....+||+.|||||++.. ..|+.++|||||||+||||++|+.||......+..........  .....+.
T Consensus       342 ~~~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~--~~~~~p~  415 (689)
T 3v5w_A          342 FSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MAVELPD  415 (689)
T ss_dssp             CSSC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH--CCCCCCT
T ss_pred             cCCC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC--CCCCCCc
Confidence            6433    2334689999999999975 5799999999999999999999999865433332222211111  0111111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVIL  658 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~  658 (706)
                              ..+    ..+.+|+..||+.||.+|++     ++||.+
T Consensus       416 --------~~S----~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          416 --------SFS----PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             --------TSC----HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             --------cCC----HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence                    112    24568999999999999998     566653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.1e-41  Score=356.06  Aligned_cols=284  Identities=35%  Similarity=0.551  Sum_probs=229.4

Q ss_pred             CCCcccHHHHHHhccCCCcc------ceeccCCceeEEEEEeCCCcEEEEEEcCcc----chhhHHHHHHHHHHHhhcCC
Q 005236          373 DLPLFELATIANATDNFSIN------KKLGEGGFGPVYKGTLADEQEIAVKRLSKI----SEQGLKELKNEIILFSKLQH  442 (706)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h  442 (706)
                      ....|.+.++..++++|...      +.||+|+||.||+|+. +++.||||++...    .....+.+.+|+.++++++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            34567888899999888776      8999999999999987 6789999998642    23446789999999999999


Q ss_pred             cceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       443 ~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                      |||+++++++.+.+..++||||+++++|.+++........+++..++.++.||+.||+|||+.+   |+||||||+||++
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili  166 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL  166 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence            9999999999999999999999999999999976555567999999999999999999999988   9999999999999


Q ss_pred             cCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhH
Q 005236          523 DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL  602 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~  602 (706)
                      ++++.+||+|||+++...............||+.|+|||.+.+ .++.++||||||+++|||++|+.||...........
T Consensus       167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  245 (307)
T 2nru_A          167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD  245 (307)
T ss_dssp             CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred             cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence            9999999999999987654333333344678999999998865 589999999999999999999999876544433332


Q ss_pred             HHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       603 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      +...... ........++..+. .........+.+++..||+.+|.+|||+.+|++.|+.+
T Consensus       246 ~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          246 IKEEIED-EEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHHHHHT-TSCCHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHhhh-hhhhhhhhcccccc-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            2221111 11112233333222 23445566788999999999999999999999999865

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.8e-42  Score=362.11  Aligned_cols=266  Identities=26%  Similarity=0.425  Sum_probs=204.2

Q ss_pred             hccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ..++|++.++||+|+||.||+|+. .++.||||++...  .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT  113 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence            347899999999999999999987 5788999998653  3455678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++........+++..++.++.||+.||+|||+.+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  192 (309)
T 3p86_A          114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST  192 (309)
T ss_dssp             ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred             ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence            99999999999976554455899999999999999999999874 24999999999999999999999999999864322


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .  .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .........   ......+.   
T Consensus       193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~---~~~~~~~~~---~~~~~~~~---  261 (309)
T 3p86_A          193 F--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP---AQVVAAVGF---KCKRLEIP---  261 (309)
T ss_dssp             -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH---HHHHHHHHH---SCCCCCCC---
T ss_pred             c--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHh---cCCCCCCC---
Confidence            1  122345789999999999999999999999999999999999999864322   111111111   11111111   


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCCCCC
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQP  669 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~~~p  669 (706)
                        ...+    ..+.+++.+||+.+|.+|||+++|++.|+.+.....|
T Consensus       262 --~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p  302 (309)
T 3p86_A          262 --RNLN----PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP  302 (309)
T ss_dssp             --TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred             --ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence              1111    2456789999999999999999999999987544333

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=5.4e-42  Score=367.64  Aligned_cols=259  Identities=28%  Similarity=0.425  Sum_probs=211.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeC--------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA--------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHG  455 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  455 (706)
                      .++|++.+.||+|+||.||+|+..        .+..||||++... .....+.+.+|+.+++++ +||||+++++++.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            468999999999999999999862        3457999999754 445567899999999999 899999999999999


Q ss_pred             CeeEEEEecCCCCChhhhhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQER-------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                      +..++||||+++|+|.+++.....             ...+++..++.++.||++||+|||+.+   |+||||||+||||
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence            999999999999999999975432             235789999999999999999999988   9999999999999


Q ss_pred             cCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchh
Q 005236          523 DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLN  601 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~  601 (706)
                      +.++.+||+|||+++.+.............+|+.|+|||++.+..++.++|||||||++|||++ |+.||......   .
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---~  313 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---E  313 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---G
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---H
Confidence            9999999999999997654443333444567889999999999999999999999999999999 99997643322   2


Q ss_pred             HHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .....    ..+.......     ..    ...+.+++..||+.+|.+||++.|+++.|+.+
T Consensus       314 ~~~~~----~~~~~~~~~~-----~~----~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i  362 (370)
T 2psq_A          314 LFKLL----KEGHRMDKPA-----NC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  362 (370)
T ss_dssp             HHHHH----HTTCCCCCCT-----TS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHH----hcCCCCCCCC-----CC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            22111    1111111110     11    12466789999999999999999999999875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.3e-42  Score=360.51  Aligned_cols=256  Identities=28%  Similarity=0.422  Sum_probs=209.9

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      ++|.+.++||+|+||.||+|+.. +++.||+|++........+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            67899999999999999999985 58899999998777778889999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++........
T Consensus        90 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  164 (310)
T 3s95_A           90 KGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ  164 (310)
T ss_dssp             TTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred             CCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence            999999999653  245899999999999999999999998   999999999999999999999999999876433221


Q ss_pred             c------------cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCch--hHHHHHHHHhh
Q 005236          546 G------------NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL--NLIRHAWKLWN  611 (706)
Q Consensus       546 ~------------~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~--~~~~~~~~~~~  611 (706)
                      .            ......||+.|+|||++.+..++.++||||||+++|||++|..|+.........  .........  
T Consensus       165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--  242 (310)
T 3s95_A          165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR--  242 (310)
T ss_dssp             ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH--
T ss_pred             ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc--
Confidence            1            111357999999999999999999999999999999999999987654332211  111111111  


Q ss_pred             cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          612 EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       612 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       .....         .+    ..+.+++.+||+.||++|||++||++.|+.+
T Consensus       243 -~~~~~---------~~----~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l  280 (310)
T 3s95_A          243 -YCPPN---------CP----PSFFPITVRCCDLDPEKRPSFVKLEHWLETL  280 (310)
T ss_dssp             -TCCTT---------CC----TTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -cCCCC---------CC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence             00100         00    1355788899999999999999999999876

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=2e-42  Score=364.12  Aligned_cols=265  Identities=26%  Similarity=0.378  Sum_probs=208.1

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC----eeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE----EKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV~  462 (706)
                      ++|++.++||+|+||.||+|+.. ++.||||++..... ....+..|+.++++++||||+++++++.+..    ..++||
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~  101 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT  101 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence            68999999999999999999885 78999999965433 3445667999999999999999999998754    369999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC----------CCCceEecccCCCcEEEcCCCCeEEee
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD----------SRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                      ||+++|+|.+++...    .+++..++.++.||+.||+|||+.          +   |+||||||+|||++.++.+||+|
T Consensus       102 e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~D  174 (322)
T 3soc_A          102 AFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIAD  174 (322)
T ss_dssp             ECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECC
T ss_pred             ecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEcc
Confidence            999999999999543    389999999999999999999987          6   99999999999999999999999


Q ss_pred             eccccccCCCCCcccccccccccCccCccccccC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHH----
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-----QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI----  603 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~----  603 (706)
                      ||+++.+.............||+.|+|||++.+.     .++.++||||||+++|||++|+.||............    
T Consensus       175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~  254 (322)
T 3soc_A          175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG  254 (322)
T ss_dssp             CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred             CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence            9999887654444344446799999999999863     5667899999999999999999998654332221111    


Q ss_pred             -----HHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          604 -----RHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       604 -----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                           ...............+...+.   .......+.+++.+||+.||++|||++||++.|+.+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l  316 (322)
T 3soc_A          255 QHPSLEDMQEVVVHKKKRPVLRDYWQ---KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM  316 (322)
T ss_dssp             SSCCHHHHHHHHTTSCCCCCCCGGGG---SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCchhhhhhhhhcccCCCCcccccc---ccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                 111111111111111111111   123445678899999999999999999999999865

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.4e-41  Score=351.58  Aligned_cols=251  Identities=23%  Similarity=0.404  Sum_probs=205.9

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.++||+|+||.||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            46899999999999999999997 56889999998765555567889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++...    .+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++........
T Consensus        99 ~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  171 (297)
T 3fxz_A           99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (297)
T ss_dssp             CTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             CCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence            9999999999543    4889999999999999999999998   99999999999999999999999999987643322


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ......   ............    
T Consensus       172 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~---~~~~~~~~~~~~----  239 (297)
T 3fxz_A          172 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP---LRALYL---IATNGTPELQNP----  239 (297)
T ss_dssp             --CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHH---HHHHCSCCCSCG----
T ss_pred             --ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH---HHhCCCCCCCCc----
Confidence              23345799999999999999999999999999999999999999854221   111111   111111110000    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ...    ...+.+++.+||+.||.+|||++|+++.
T Consensus       240 ~~~----~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          240 EKL----SAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             GGS----CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ccc----CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            011    1245678999999999999999999863

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.5e-41  Score=357.90  Aligned_cols=260  Identities=27%  Similarity=0.418  Sum_probs=207.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeC----CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      .++|++.+.||+|+||.||+|++.    .+..||||++... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            367899999999999999999984    3456999999763 45556789999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++++|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus       128 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             EEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            999999999999995432  45899999999999999999999988   9999999999999999999999999999865


Q ss_pred             CCCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          541 GDETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       541 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ...... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....   ........    .......
T Consensus       203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~---~~~~~~~~----~~~~~~~  275 (325)
T 3kul_A          203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN---RDVISSVE----EGYRLPA  275 (325)
T ss_dssp             ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH---HHHHHHHH----TTCCCCC
T ss_pred             cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHH----cCCCCCC
Confidence            432221 2223456788999999999999999999999999999999 9999754322   12221111    1111110


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCC
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVL  666 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~  666 (706)
                      .     ...    ...+.+++..||+.||.+|||+.+|++.|+.+...
T Consensus       276 ~-----~~~----~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          276 P-----MGC----PHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             C-----TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             C-----CCc----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            0     011    12466789999999999999999999999987543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.2e-41  Score=358.55  Aligned_cols=249  Identities=25%  Similarity=0.373  Sum_probs=204.8

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            346899999999999999999998 56899999998653  445567889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        93 ~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  166 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTV  166 (328)
T ss_dssp             ECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred             EECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence            9999999999999654   34889999999999999999999998   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFS-VKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ..   ......||+.|+|||++.+..++ .++|||||||++|||++|+.||.....   .......   . .+... +  
T Consensus       167 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~i---~-~~~~~-~--  233 (328)
T 3fe3_A          167 GG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---KELRERV---L-RGKYR-I--  233 (328)
T ss_dssp             SC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHH---H-HCCCC-C--
T ss_pred             CC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH---HHHHHHH---H-hCCCC-C--
Confidence            22   23446799999999999988875 799999999999999999999854321   1111111   1 11110 0  


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                         ....    ...+.+++.+||+.||.+|||++|+++.
T Consensus       234 ---p~~~----s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          234 ---PFYM----STDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             ---CTTS----CHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             ---CCCC----CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence               0011    1245678899999999999999999874

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3.6e-41  Score=354.34  Aligned_cols=263  Identities=24%  Similarity=0.356  Sum_probs=211.1

Q ss_pred             CCcccHHHHHHhccC----------CCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCC
Q 005236          374 LPLFELATIANATDN----------FSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQH  442 (706)
Q Consensus       374 ~~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h  442 (706)
                      .+.++..++..+++.          |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH  101 (321)
T ss_dssp             ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred             CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence            345666666666543          677789999999999999986 689999999976666667889999999999999


Q ss_pred             cceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       443 ~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                      |||+++++++...+..++||||+++++|.+++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||+
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll  174 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILL  174 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEE
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEE
Confidence            9999999999999999999999999999999853    34899999999999999999999988   9999999999999


Q ss_pred             cCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhH
Q 005236          523 DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL  602 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~  602 (706)
                      +.++.+||+|||++..+.....  ......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ....
T Consensus       175 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~---~~~~  249 (321)
T 2c30_A          175 TLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS---PVQA  249 (321)
T ss_dssp             CTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC---HHHH
T ss_pred             CCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHH
Confidence            9999999999999987643322  2234579999999999999999999999999999999999999975322   1122


Q ss_pred             HHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       603 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ....    .......+...   ...+    ..+.+++.+||+.||++|||++|+++.
T Consensus       250 ~~~~----~~~~~~~~~~~---~~~~----~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          250 MKRL----RDSPPPKLKNS---HKVS----PVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HHHH----HHSSCCCCTTG---GGSC----HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHH----hcCCCCCcCcc---ccCC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            2111    11111111100   0111    245678899999999999999999874

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-41  Score=363.74  Aligned_cols=269  Identities=29%  Similarity=0.410  Sum_probs=215.7

Q ss_pred             hccCCCccceeccCCceeEEEEEeC--------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA--------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIH  454 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  454 (706)
                      ..++|.+.++||+|+||.||+|+..        .+..||||++... .....+.+.+|+.+++++ +||||+++++++.+
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            3478999999999999999999862        2357999998653 455567899999999999 99999999999999


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEE
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQER-------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVL  521 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nil  521 (706)
                      .+..++||||+++|+|.+++.....             ...+++..++.++.||+.||+|||+.+   |+||||||+|||
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl  223 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL  223 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence            9999999999999999999975432             235899999999999999999999988   999999999999


Q ss_pred             EcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCch
Q 005236          522 LDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKL  600 (706)
Q Consensus       522 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~  600 (706)
                      |++++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....   .
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~---~  300 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---E  300 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---H
T ss_pred             EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH---H
Confidence            99999999999999987754443334444567899999999999999999999999999999999 9998753321   1


Q ss_pred             hHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCCCCCCCC
Q 005236          601 NLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQP  672 (706)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~~~p~~p  672 (706)
                      ...    ..+..........     ..    ...+.+++.+||+.+|.+|||++||++.|+.+.........
T Consensus       301 ~~~----~~~~~~~~~~~~~-----~~----~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~  359 (382)
T 3tt0_A          301 ELF----KLLKEGHRMDKPS-----NC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEM  359 (382)
T ss_dssp             HHH----HHHHTTCCCCCCS-----SC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC-
T ss_pred             HHH----HHHHcCCCCCCCc-----cC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCC
Confidence            111    1222221111111     11    12466789999999999999999999999987544433333

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.1e-41  Score=366.54  Aligned_cols=257  Identities=25%  Similarity=0.385  Sum_probs=207.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|.+.+.||+|+||.||+|++. +++.||||++... .....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            468899999999999999999986 6889999998753 33445678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++|+|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++......
T Consensus       193 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~  267 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV  267 (377)
T ss_dssp             CCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred             cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence            999999999996532  35889999999999999999999998   9999999999999999999999999998754322


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .........+++.|+|||.+....++.++||||||+++|||++ |+.||.....   .....    ....+.......  
T Consensus       268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~---~~~~~----~~~~~~~~~~~~--  338 (377)
T 3cbl_A          268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN---QQTRE----FVEKGGRLPCPE--  338 (377)
T ss_dssp             EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH---HHHHH----HHHTTCCCCCCT--
T ss_pred             eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHH----HHHcCCCCCCCC--
Confidence            2222222346788999999999999999999999999999998 9988754322   11111    111111111100  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                         ..    ...+.+++.+||+.||.+|||+++|++.|+.+
T Consensus       339 ---~~----~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          339 ---LC----PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             ---TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---CC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence               11    12456789999999999999999999999865

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.5e-41  Score=362.22  Aligned_cols=259  Identities=29%  Similarity=0.435  Sum_probs=207.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      .++|++.++||+|+||.||+|++.      .++.||||++... .......+.+|+.++++++||||+++++++.+....
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            367999999999999999999853      3668999999653 455566889999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhccc----ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC---CeEEe
Q 005236          459 LLIYEFMPNKSLDSFIFDQE----RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM---NPKIS  531 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~---~~kl~  531 (706)
                      ++||||+++|+|.+++....    ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence            99999999999999997543    2245889999999999999999999998   99999999999999555   59999


Q ss_pred             eeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHh
Q 005236          532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      |||+++.+.............+|+.|+|||++.+..++.++|||||||++|||++ |+.||....   .......    .
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~---~~~~~~~----i  299 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---NQEVLEF----V  299 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC---HHHHHHH----H
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHH----H
Confidence            9999986533333333344568999999999999999999999999999999998 999875422   1122211    1


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..........     ..    ...+.+++..||+.+|.+|||+.+|++.|+.+
T Consensus       300 ~~~~~~~~~~-----~~----~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          300 TSGGRMDPPK-----NC----PGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HTTCCCCCCT-----TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HcCCCCCCCc-----cC----CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            1111111111     11    12466789999999999999999999999765

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=5.3e-41  Score=360.22  Aligned_cols=257  Identities=28%  Similarity=0.441  Sum_probs=196.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC----CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.+.||+|+||.||+|++.    .+..||||++... .....+.+.+|+.++++++||||+++++++.+....++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            58999999999999999999875    4778999999753 455567899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus       125 ~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          125 TEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED  199 (373)
T ss_dssp             EECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence            9999999999999653  245899999999999999999999988   99999999999999999999999999987654


Q ss_pred             CCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          542 DETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       542 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ..... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.....   ...............     
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~---~~~~~~i~~~~~~~~-----  271 (373)
T 2qol_A          200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---QDVIKAVDEGYRLPP-----  271 (373)
T ss_dssp             --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH---HHHHHHHHTTEECCC-----
T ss_pred             CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCCCCC-----
Confidence            32211 1222345788999999999999999999999999999998 9999754321   122211111110000     


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                              .......+.+++.+||+.+|.+||++.+|+++|+.+.
T Consensus       272 --------~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          272 --------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI  308 (373)
T ss_dssp             --------CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --------CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence                    0011235668999999999999999999999998763

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=3.8e-41  Score=349.79  Aligned_cols=264  Identities=26%  Similarity=0.409  Sum_probs=205.1

Q ss_pred             ccCCCccceeccCCceeEEEEEe-----CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--Cee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  458 (706)
                      .++|++.++||+|+||.||+|+.     .+++.||||++........+.+.+|+.++++++||||+++++++...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            36899999999999999999984     35789999999887777788999999999999999999999998654  468


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++++|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             EEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            99999999999999996543  34899999999999999999999988   99999999999999999999999999987


Q ss_pred             cCCCCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCC---------CCchhHHHHHHH
Q 005236          539 FGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS---------DNKLNLIRHAWK  608 (706)
Q Consensus       539 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~---------~~~~~~~~~~~~  608 (706)
                      ....... .......++..|+|||.+.+..++.++||||||+++|||++|..|+.....         ............
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  243 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence            6443221 122334577889999999999999999999999999999999988653211         000111111112


Q ss_pred             HhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       609 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...........+     ..    ...+.+++..||+.||.+|||++||++.|+.+
T Consensus       244 ~~~~~~~~~~~~-----~~----~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l  289 (295)
T 3ugc_A          244 LLKNNGRLPRPD-----GC----PDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  289 (295)
T ss_dssp             HHHTTCCCCCCT-----TC----CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhccCcCCCCc-----Cc----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            222211111111     11    13466789999999999999999999999865

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2.6e-41  Score=361.33  Aligned_cols=269  Identities=29%  Similarity=0.426  Sum_probs=213.3

Q ss_pred             ccHHHHHHhccCCCccceeccCCceeEEEEEe------CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeee
Q 005236          377 FELATIANATDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKL  448 (706)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l  448 (706)
                      +.........++|++.+.||+|+||.||+|++      .+++.||||++... .....+.+.+|+.++.++ +||||+++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            34455556678999999999999999999974      34678999999763 444567899999999999 79999999


Q ss_pred             EeEEEeCCe-eEEEEecCCCCChhhhhhcccc------------------------------------------------
Q 005236          449 LGCCIHGEE-KLLIYEFMPNKSLDSFIFDQER------------------------------------------------  479 (706)
Q Consensus       449 ~~~~~~~~~-~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------  479 (706)
                      ++++.+.+. .++||||+++|+|.+++.....                                                
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK  171 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence            999987654 8999999999999999975432                                                


Q ss_pred             ---------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          480 ---------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       480 ---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                                     ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.....
T Consensus       172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~  248 (359)
T 3vhe_A          172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD  248 (359)
T ss_dssp             ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred             ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence                           122889999999999999999999998   99999999999999999999999999987654443


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      ........||+.|+|||++.+..++.++||||||+++|||++ |+.||.......  .....    ...........   
T Consensus       249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~----~~~~~~~~~~~---  319 (359)
T 3vhe_A          249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRR----LKEGTRMRAPD---  319 (359)
T ss_dssp             CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHHH----HHHTCCCCCCT---
T ss_pred             chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HHHHH----HHcCCCCCCCC---
Confidence            334445678999999999999999999999999999999998 999975433221  11111    11111111111   


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                        ..+    ..+.+++..||+.+|.+|||++||++.|+.+
T Consensus       320 --~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  353 (359)
T 3vhe_A          320 --YTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  353 (359)
T ss_dssp             --TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence              111    2466788999999999999999999999865

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=9.9e-41  Score=351.17  Aligned_cols=254  Identities=26%  Similarity=0.373  Sum_probs=201.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999985 68899999985432 2334678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+....
T Consensus        86 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  159 (323)
T 3tki_A           86 YCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  159 (323)
T ss_dssp             CCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             cCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence            99999999998543   34899999999999999999999988   9999999999999999999999999998764333


Q ss_pred             CcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .........||+.|+|||++.+..+ +.++||||||+++|||++|+.||......... ...+     ......  ..+ 
T Consensus       160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~-----~~~~~~--~~~-  230 (323)
T 3tki_A          160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDW-----KEKKTY--LNP-  230 (323)
T ss_dssp             EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH-HHHH-----HTTCTT--STT-
T ss_pred             cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH-HHHH-----hccccc--CCc-
Confidence            3333345679999999999988776 78999999999999999999998654332211 1111     111100  000 


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      . ...+    ..+.+++.+||+.||.+|||++|+++.
T Consensus       231 ~-~~~~----~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          231 W-KKID----SAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             G-GGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             c-ccCC----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            0 0111    235578899999999999999999865

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.9e-40  Score=346.29  Aligned_cols=272  Identities=20%  Similarity=0.272  Sum_probs=214.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC--eeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE--EKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV  461 (706)
                      .++|++.++||+|+||.||+|+... ++.||||++.... ....+.+.+|+.++++++||||+++++++....  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            3679999999999999999999864 8899999987533 344677889999999999999999999998765  77999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE----cCCCCeEEeeecccc
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLAR  537 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill----~~~~~~kl~Dfgla~  537 (706)
                      |||+++++|.+++........+++..++.++.||+.||+|||+.+   |+||||||+||||    +.++.+||+|||+++
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            999999999999987665556999999999999999999999998   9999999999999    788889999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccc--------cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc-hhHHHHHHH
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYAS--------DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK-LNLIRHAWK  608 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~-~~~~~~~~~  608 (706)
                      .+....   ......||+.|+|||++.        +..++.++||||||+++|||++|+.||........ .........
T Consensus       165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  241 (319)
T 4euu_A          165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (319)
T ss_dssp             ECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred             ecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence            764332   222356899999999986        57899999999999999999999999865443222 222222222


Q ss_pred             HhhcCCCccccc-----------ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          609 LWNEGMPSQLID-----------ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       609 ~~~~~~~~~~~d-----------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .........+..           ..............+.+++..||+.||++|||++|+++.....
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            111111111000           0011123344555677899999999999999999999988754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=4.2e-41  Score=354.86  Aligned_cols=255  Identities=26%  Similarity=0.414  Sum_probs=199.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-Cc----EEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQ----EIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.++||+|+||.||+|++.. ++    +||+|.+.. ......+.+.+|+.++++++||||+++++++.++. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            579999999999999999999743 33    368888754 33455678999999999999999999999998754 789


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |+||+++|+|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        94 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  168 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred             EEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence            999999999999996543  45899999999999999999999998   9999999999999999999999999999876


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......   .....    .........
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~~~----~~~~~~~~~  241 (327)
T 3poz_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSIL----EKGERLPQP  241 (327)
T ss_dssp             TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH----HTTCCCCCC
T ss_pred             CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HHHHH----HcCCCCCCC
Confidence            5444434444567889999999999999999999999999999999 999986543322   11111    111110000


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                               ......+.+++.+||+.+|.+||++.||++.|+.+
T Consensus       242 ---------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  276 (327)
T 3poz_A          242 ---------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             ---------TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred             ---------ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence                     01122466789999999999999999999999765

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=9.7e-41  Score=341.63  Aligned_cols=257  Identities=28%  Similarity=0.417  Sum_probs=209.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .++|++.+.||+|+||.||+|+..++..||||++.... ...+++.+|+.++.+++||||+++++++.+....++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            46899999999999999999999888899999986533 23467899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++....  ..+++..++.++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||+++........
T Consensus        86 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  160 (268)
T 3sxs_A           86 SNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV  160 (268)
T ss_dssp             TTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred             CCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence            9999999996542  35899999999999999999999988   999999999999999999999999999876443222


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                       ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......   ......    ........ .    
T Consensus       161 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~----~~~~~~~~-~----  227 (268)
T 3sxs_A          161 -SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS---EVVLKV----SQGHRLYR-P----  227 (268)
T ss_dssp             -ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHHH----HTTCCCCC-C----
T ss_pred             -cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH---HHHHHH----HcCCCCCC-C----
Confidence             2223456778999999999899999999999999999999 99997543221   111111    11111000 0    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      ...+    ..+.+++..||+.+|.+|||++|+++.|+.+.+
T Consensus       228 ~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          228 HLAS----DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             TTSC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             CcCh----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            0111    246678999999999999999999999998754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.3e-41  Score=344.52  Aligned_cols=254  Identities=26%  Similarity=0.429  Sum_probs=207.0

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|+.++++++||||+++++++.+....++||||++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            5789999999999999999999889999999996533 234678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++....  ..+++..++.++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||+++....... .
T Consensus        89 ~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  162 (269)
T 4hcu_A           89 HGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-T  162 (269)
T ss_dssp             TCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-H
T ss_pred             CCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccc-c
Confidence            999999995433  45899999999999999999999998   99999999999999999999999999987543221 1


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....   ........    ...... ..    .
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~---~~~~~~~~----~~~~~~-~~----~  230 (269)
T 4hcu_A          163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---SEVVEDIS----TGFRLY-KP----R  230 (269)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHHH----TTCCCC-CC----T
T ss_pred             cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH---HHHHHHHh----cCccCC-CC----C
Confidence            2223456788999999999999999999999999999999 8999754222   12221111    111100 00    0


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..    ...+.+++..||+.+|++|||++|+++.|+.+
T Consensus       231 ~~----~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l  264 (269)
T 4hcu_A          231 LA----STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  264 (269)
T ss_dssp             TS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cC----CHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence            11    12466788999999999999999999999865

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.5e-40  Score=350.97  Aligned_cols=253  Identities=24%  Similarity=0.359  Sum_probs=200.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE------  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------  457 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++.+...      
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            467999999999999999999986 6899999998643 33456789999999999999999999999876542      


Q ss_pred             ---------------------------------------------------eEEEEecCCCCChhhhhhcccccCCCCHH
Q 005236          458 ---------------------------------------------------KLLIYEFMPNKSLDSFIFDQERCKLLDWS  486 (706)
Q Consensus       458 ---------------------------------------------------~~lV~e~~~~gsL~~~l~~~~~~~~l~~~  486 (706)
                                                                         .++||||+++++|.+++.........++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                               79999999999999999877666667888


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc----------ccccccccccC
Q 005236          487 KRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE----------GNTNRVVGTYG  556 (706)
Q Consensus       487 ~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~----------~~~~~~~gt~~  556 (706)
                      .++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++........          .......||+.
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            89999999999999999988   999999999999999999999999999987543211          12233579999


Q ss_pred             ccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHH
Q 005236          557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCI  636 (706)
Q Consensus       557 y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  636 (706)
                      |+|||++.+..++.++||||||+++|||++|..|+.        .. .................         .....+.
T Consensus       242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~---------~~~~~~~  303 (332)
T 3qd2_B          242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM--------ER-VRIITDVRNLKFPLLFT---------QKYPQEH  303 (332)
T ss_dssp             GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH--------HH-HHHHHHHHTTCCCHHHH---------HHCHHHH
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh--------HH-HHHHHHhhccCCCcccc---------cCChhHH
Confidence            999999999999999999999999999999876621        11 11111111222111111         1122456


Q ss_pred             HHHHHhcCCCCCCCCChhHHHHH
Q 005236          637 HIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       637 ~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      +++.+||+.||.+|||++|+++.
T Consensus       304 ~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          304 MMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHccCCCCcCCCHHHHhhc
Confidence            78999999999999999999863

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.7e-40  Score=344.70  Aligned_cols=261  Identities=25%  Similarity=0.368  Sum_probs=205.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc---cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||.||+|+.. .++.||+|++..   ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            468999999999999999999974 588999998843   3445567899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus        90 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred             EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence            9999999999999654   35899999999999999999999998   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....      ............. .... 
T Consensus       164 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~-~~~~-  234 (294)
T 4eqm_A          164 TSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDSVP-NVTT-  234 (294)
T ss_dssp             ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSCCC-CHHH-
T ss_pred             ccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhccCC-Ccch-
Confidence            221 223345799999999999999999999999999999999999999754221      1111122222111 1100 


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCC-ChhHHHHHhcCCCC
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-CMPSVILMLGSEIV  665 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-t~~ev~~~L~~~~~  665 (706)
                      ......    ...+.+++.+||+.||.+|| +++++.+.|+....
T Consensus       235 ~~~~~~----~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          235 DVRKDI----PQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             HSCTTS----CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred             hcccCC----CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence            011111    12466789999999999999 99999999987644

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-41  Score=356.86  Aligned_cols=265  Identities=26%  Similarity=0.420  Sum_probs=212.9

Q ss_pred             HHHhccCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEe
Q 005236          382 IANATDNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIH  454 (706)
Q Consensus       382 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  454 (706)
                      +....++|++.+.||+|+||.||+|+..+      ++.||||++... .....+.+.+|+.++++++||||+++++++.+
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            34456899999999999999999999853      478999999764 44456789999999999999999999999999


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccc---------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEec
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQER---------------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHR  513 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~  513 (706)
                      .+..++||||+++++|.+++.....                     ...+++..++.++.||++||.|||+++   |+||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~  198 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR  198 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence            9999999999999999999975321                     256899999999999999999999998   9999


Q ss_pred             ccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCC
Q 005236          514 DLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRG  592 (706)
Q Consensus       514 Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~  592 (706)
                      ||||+|||++.++.+||+|||+++.+.............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus       199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  278 (343)
T 1luf_A          199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY  278 (343)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence            9999999999999999999999987643332233334568899999999999999999999999999999999 999975


Q ss_pred             CCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          593 FYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      ....   .....    ....+......+     ..+    ..+.+++..||+.+|.+||++.+|++.|+.+..
T Consensus       279 ~~~~---~~~~~----~~~~~~~~~~~~-----~~~----~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          279 GMAH---EEVIY----YVRDGNILACPE-----NCP----LELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             TSCH---HHHHH----HHHTTCCCCCCT-----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             CCCh---HHHHH----HHhCCCcCCCCC-----CCC----HHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            3221   11111    111222111111     111    246678999999999999999999999998744

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.9e-40  Score=346.59  Aligned_cols=264  Identities=27%  Similarity=0.440  Sum_probs=202.4

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.+.||+|+||.||+|+.. ++.||||++...  ...+.+.+|+.++++++||||+++++++.  +..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence            57889999999999999999985 678999998643  34578999999999999999999999876  45899999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC-eEEeeeccccccCCCCCc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN-PKISDFGLARAFGGDETE  545 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~-~kl~Dfgla~~~~~~~~~  545 (706)
                      +++|.+++........+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||++......   
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---  159 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---  159 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence            9999999977655556889999999999999999999943234999999999999998887 799999999765322   


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                        .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......  ..+  .+... .........     
T Consensus       160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~--~~~~~-~~~~~~~~~-----  227 (307)
T 2eva_A          160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--FRI--MWAVH-NGTRPPLIK-----  227 (307)
T ss_dssp             -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH--HHH--HHHHH-TTCCCCCBT-----
T ss_pred             --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH--HHH--HHHHh-cCCCCCccc-----
Confidence              223468999999999999999999999999999999999999986433221  111  11111 111111111     


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC-CCCCCCCCCc
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI-VLPQPKQPGY  674 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~-~~~~p~~p~~  674 (706)
                      ..+    ..+.+++.+||+.+|.+|||++||++.|+.+. ..+.+..|..
T Consensus       228 ~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~~~  273 (307)
T 2eva_A          228 NLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQ  273 (307)
T ss_dssp             TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSCCC
T ss_pred             ccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCccc
Confidence            111    24567899999999999999999999998763 3444444433

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=6e-41  Score=354.16  Aligned_cols=249  Identities=21%  Similarity=0.265  Sum_probs=203.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||.||+++.. +++.||||++.+.   .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            368999999999999999999985 5889999998653   233467789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++++||+|||+++....
T Consensus        84 ~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  157 (337)
T 1o6l_A           84 MEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence            9999999999998643   35889999999999999999999988   99999999999999999999999999986432


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ..  .......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ........   ... ... +   
T Consensus       158 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~---~~~~~~~i---~~~-~~~-~---  224 (337)
T 1o6l_A          158 DG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HERLFELI---LME-EIR-F---  224 (337)
T ss_dssp             TT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHH---HHC-CCC-C---
T ss_pred             CC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC---HHHHHHHH---HcC-CCC-C---
Confidence            22  22334679999999999999999999999999999999999999975322   11111111   111 110 0   


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~~  659 (706)
                        ....+    ..+.+++..||+.||.+||     +++||++.
T Consensus       225 --p~~~s----~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          225 --PRTLS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             --CTTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             --CCCCC----HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence              01111    2456788999999999999     89998753

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=7.4e-41  Score=368.89  Aligned_cols=259  Identities=31%  Similarity=0.449  Sum_probs=209.2

Q ss_pred             HhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ...++|.+.++||+|+||.||+|+++++..||||++.... ...+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e  262 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE  262 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence            3457899999999999999999999888999999997543 34678999999999999999999999986 667899999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++|+|.+++.... ...+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++......
T Consensus       263 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~  338 (454)
T 1qcf_A          263 FMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE  338 (454)
T ss_dssp             CCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred             ecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence            999999999996542 235788999999999999999999988   9999999999999999999999999998764321


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .. ......+|+.|+|||++....++.++||||||++||||++ |+.||.....   .+.............+       
T Consensus       339 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~---~~~~~~i~~~~~~~~~-------  407 (454)
T 1qcf_A          339 YT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---PEVIRALERGYRMPRP-------  407 (454)
T ss_dssp             HH-TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---HHHHHHHHHTCCCCCC-------
T ss_pred             ee-ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCCCCCC-------
Confidence            11 1222446789999999999999999999999999999999 9999754322   2222221111111110       


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                        ...    ...+.+++.+||+.||.+|||+++|++.|+.+..
T Consensus       408 --~~~----~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          408 --ENC----PEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             --TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             --CCC----CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence              011    1246678999999999999999999999998744

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=5.7e-41  Score=353.24  Aligned_cols=262  Identities=24%  Similarity=0.400  Sum_probs=194.0

Q ss_pred             hccCCCccceeccCCceeEEEEEeCCCc----EEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLADEQ----EIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~----~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      ..++|++.+.||+|+||.||+|++....    .||||++...  .....+.+.+|+.++++++||||+++++++......
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence            3468999999999999999999975532    7999998653  345567899999999999999999999999877655


Q ss_pred             ------EEEEecCCCCChhhhhhcccc---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeE
Q 005236          459 ------LLIYEFMPNKSLDSFIFDQER---CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPK  529 (706)
Q Consensus       459 ------~lV~e~~~~gsL~~~l~~~~~---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~k  529 (706)
                            ++||||+++++|.+++.....   ...+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+|
T Consensus       101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~k  177 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVC  177 (323)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEE
T ss_pred             cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEE
Confidence                  999999999999999965432   225899999999999999999999998   99999999999999999999


Q ss_pred             EeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHH
Q 005236          530 ISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWK  608 (706)
Q Consensus       530 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~  608 (706)
                      |+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......   ....... 
T Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~~~~-  253 (323)
T 3qup_A          178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA---EIYNYLI-  253 (323)
T ss_dssp             ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHHHH-
T ss_pred             EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH---HHHHHHh-
Confidence            999999987654433333334567889999999999999999999999999999999 89987643322   2221111 


Q ss_pred             HhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       609 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                         .........     ..    ...+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus       254 ---~~~~~~~~~-----~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          254 ---GGNRLKQPP-----EC----MEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             ---TTCCCCCCT-----TC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---cCCCCCCCC-----cc----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence               111111100     11    1246689999999999999999999999987743

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.2e-40  Score=348.68  Aligned_cols=263  Identities=26%  Similarity=0.335  Sum_probs=203.0

Q ss_pred             hccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ..++|++.++||+|+||.||+|+..+++.||||++...  .....+.+.+|+.++++++||||+++++++.++...++||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            34789999999999999999999988999999998653  2233567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++ +|.+++....  ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        99 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  172 (311)
T 3niz_A           99 EFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIP  172 (311)
T ss_dssp             ECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred             cCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence            99985 7887775432  45889999999999999999999988   999999999999999999999999999876422


Q ss_pred             CCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc---
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL---  618 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  618 (706)
                      .  .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+....+..   ..........   
T Consensus       173 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~  247 (311)
T 3niz_A          173 V--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS---ILGTPNPREWPQV  247 (311)
T ss_dssp             C--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHH---HHCCCCTTTSGGG
T ss_pred             c--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH---HHCCCChHHhhhh
Confidence            2  12233568999999999876 5689999999999999999999999876554443332222   2211111110   


Q ss_pred             ccc------c--ccCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          619 IDA------C--FKDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       619 ~d~------~--~~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .+.      .  ........     ....+.+++.+||+.||.+|||++|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            000      0  00000111     1124678999999999999999999987

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.5e-41  Score=356.27  Aligned_cols=256  Identities=23%  Similarity=0.344  Sum_probs=201.3

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcE----EEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQE----IAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.+.||+|+||.||+|++.. ++.    ||+|.+... .....+.+.+|+.++++++||||+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            579999999999999999999743 443    788877543 2333456788999999999999999999885 567899


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++|+|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        92 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             EEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             EEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccC
Confidence            99999999999999654  245888999999999999999999998   9999999999999999999999999999876


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ............+|..|+|||++.+..++.++||||||+++|||++ |+.||.......   ........ .........
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~-~~~~~~~~~  242 (325)
T 3kex_A          167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDLLEKG-ERLAQPQIC  242 (325)
T ss_dssp             CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHHHHTT-CBCCCCTTB
T ss_pred             cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHHHHcC-CCCCCCCcC
Confidence            5544444445678889999999999999999999999999999999 999986543222   11111111 011111111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      .            ..+.+++..||+.+|.+||+++||++.|+.+.
T Consensus       243 ~------------~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          243 T------------IDVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             C------------TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             c------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            1            12446888999999999999999999998764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.2e-40  Score=349.19  Aligned_cols=259  Identities=30%  Similarity=0.440  Sum_probs=210.9

Q ss_pred             ccCCCccceeccCCceeEEEEEe------CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      .++|.+.+.||+|+||.||+|+.      .+++.||||++... .....+.+.+|+.++++++||||+++++++.+.+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            46899999999999999999986      23578999998753 455567899999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccc---------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCC
Q 005236          459 LLIYEFMPNKSLDSFIFDQER---------------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKA  517 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp  517 (706)
                      ++||||+++++|.+++.....                     ...+++..++.++.||+.||+|||+++   |+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccch
Confidence            999999999999999976432                     134789999999999999999999988   99999999


Q ss_pred             CcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCC
Q 005236          518 SNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHS  596 (706)
Q Consensus       518 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~  596 (706)
                      +|||+++++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus       179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  258 (314)
T 2ivs_A          179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP  258 (314)
T ss_dssp             GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999987654443333344567889999999999999999999999999999999 9999764333


Q ss_pred             CCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          597 DNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       597 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..   .....    ..........     ..    ...+.+++.+||+.||.+||++.||++.|+.+
T Consensus       259 ~~---~~~~~----~~~~~~~~~~-----~~----~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          259 ER---LFNLL----KTGHRMERPD-----NC----SEEMYRLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             GG---HHHHH----HTTCCCCCCT-----TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HH---HHHHh----hcCCcCCCCc-----cC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            21   21111    1111111111     11    12466789999999999999999999999865

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=8.3e-41  Score=356.34  Aligned_cols=251  Identities=22%  Similarity=0.288  Sum_probs=203.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch------hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE------QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      .+.|.+.+.||+|+||.||+++.. +++.||+|.+.....      ...+.+.+|+.++++++||||+++++++.+....
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            468999999999999999999985 588999999865322      1357899999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC----CeEEeeec
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM----NPKISDFG  534 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~----~~kl~Dfg  534 (706)
                      ++||||+++|+|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++    .+||+|||
T Consensus        91 ~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG  164 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred             EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence            9999999999999999543   35899999999999999999999998   99999999999998877    79999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      +++.+....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||....   ........    ....
T Consensus       165 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~---~~~~~~~i----~~~~  234 (361)
T 2yab_A          165 LAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANI----TAVS  234 (361)
T ss_dssp             SCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS---HHHHHHHH----HTTC
T ss_pred             CceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHH----HhcC
Confidence            998764322   2234579999999999999999999999999999999999999985422   11221111    1111


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      . .+ ++......+    ..+.+++..||+.||.+|||+.|+++
T Consensus       235 ~-~~-~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          235 Y-DF-DEEFFSQTS----ELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             C-CC-CHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             C-CC-CchhccCCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1 00 000001111    24567899999999999999999985

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.8e-40  Score=345.53  Aligned_cols=261  Identities=23%  Similarity=0.320  Sum_probs=200.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhh--cCCcceeeeEeEEEeC----CeeE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSK--LQHRNLVKLLGCCIHG----EEKL  459 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~~  459 (706)
                      .++|++.+.||+|+||.||+|+. +++.||||++...   ..+.+..|.+++..  ++||||+++++++...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            46899999999999999999998 6889999998653   33455566666665  7999999999997653    4578


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCceEecccCCCcEEEcCCCCeEEe
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH--------QDSRLRIIHRDLKASNVLLDQDMNPKIS  531 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dikp~Nill~~~~~~kl~  531 (706)
                      +||||+++|+|.+++..    ..+++..+++++.||+.||+|||        +.+   |+||||||+|||++.++.+||+
T Consensus        83 lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~  155 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIA  155 (301)
T ss_dssp             EEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEEC
T ss_pred             EehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEe
Confidence            99999999999999943    35899999999999999999999        666   9999999999999999999999


Q ss_pred             eeccccccCCCCCcc--cccccccccCccCccccccC------CCCcchhhHHHHHHHHHHHhC----------CCCCCC
Q 005236          532 DFGLARAFGGDETEG--NTNRVVGTYGYMAPEYASDG------QFSVKSDVFSFGILLLEIVSG----------KKNRGF  593 (706)
Q Consensus       532 Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~s~~sDv~SlGvil~elltG----------~~p~~~  593 (706)
                      |||+++.........  ......||+.|+|||++.+.      .++.++||||||+++|||++|          +.||..
T Consensus       156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~  235 (301)
T 3q4u_A          156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD  235 (301)
T ss_dssp             CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence            999998764332221  22334799999999999876      456799999999999999999          777654


Q ss_pred             CCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          594 YHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ............. ..........+..    ..........+.+++.+||+.||.+|||++||++.|+.
T Consensus       236 ~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          236 VVPNDPSFEDMRK-VVCVDQQRPNIPN----RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             TSCSSCCHHHHHH-HHTTSCCCCCCCG----GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCCCcchhhhhH-HHhccCCCCCCCh----hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            4333222111111 1111111111111    11122345567889999999999999999999999975

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.5e-41  Score=351.27  Aligned_cols=252  Identities=21%  Similarity=0.283  Sum_probs=203.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.+.||+|+||.||+++.. +++.+|+|.+... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            478999999999999999999985 4788999998643 34456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC--CCCeEEeeeccccccCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ--DMNPKISDFGLARAFGGD  542 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~--~~~~kl~Dfgla~~~~~~  542 (706)
                      +++++|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.  ++.+||+|||+++.+...
T Consensus        83 ~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~  157 (321)
T 1tki_A           83 ISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence            9999999999543  235899999999999999999999998   999999999999997  789999999999876432


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .   ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ........   .....  .....
T Consensus       158 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~---~~~~~--~~~~~  226 (321)
T 1tki_A          158 D---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN---QQIIENIM---NAEYT--FDEEA  226 (321)
T ss_dssp             C---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHH---HTCCC--CCHHH
T ss_pred             C---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH---HHHHHHHH---cCCCC--CChhh
Confidence            2   22345789999999999998899999999999999999999999854221   12221111   11110  00000


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      + ...    ...+.+++.+||+.||.+|||+.|+++.
T Consensus       227 ~-~~~----s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          227 F-KEI----SIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             H-TTS----CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             h-ccC----CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            0 011    1246688999999999999999999873

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=3.3e-40  Score=343.06  Aligned_cols=261  Identities=15%  Similarity=0.215  Sum_probs=211.4

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.+.||+|+||.||+|+. .+++.||||++....  ..+.+.+|+.++.++ +|+|++++++++.+....++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            46799999999999999999997 568899999985432  234678899999999 79999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC-----eEEeeeccccc
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN-----PKISDFGLARA  538 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~-----~kl~Dfgla~~  538 (706)
                      |+ +++|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.     +||+|||+++.
T Consensus        87 ~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           87 LL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             CC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            99 999999996542  35899999999999999999999988   999999999999988776     99999999987


Q ss_pred             cCCCCCc-----ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          539 FGGDETE-----GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       539 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      .......     .......||+.|+|||++.+..++.++||||||+++|||++|+.||......................
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  240 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence            6543221     12334679999999999999999999999999999999999999987655444444333332222222


Q ss_pred             CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          614 MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       614 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ....+..     ..+    ..+.+++..||+.+|.+||++++|++.|+.+
T Consensus       241 ~~~~~~~-----~~~----~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          241 PLRELCA-----GFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             CHHHHTT-----TSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             cHHHHHh-----hCc----HHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            2111111     111    2466789999999999999999999999876

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2.5e-40  Score=349.46  Aligned_cols=260  Identities=18%  Similarity=0.209  Sum_probs=209.3

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.+.||+|+||.||+|+. .+++.||||++.....  .+.+.+|+.+++++ +||||+++++++..++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            36899999999999999999997 5688999999864322  24688999999999 99999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC-----eEEeeeccccc
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN-----PKISDFGLARA  538 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~-----~kl~Dfgla~~  538 (706)
                      |+ +++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.     +||+|||+++.
T Consensus        86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           86 LL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             eC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence            99 99999999653  246899999999999999999999998   999999999999999887     99999999997


Q ss_pred             cCCCCCcc-----cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          539 FGGDETEG-----NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       539 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      +.......     ......||+.|+|||++.+..++.++||||||+++|||++|+.||......................
T Consensus       160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~  239 (330)
T 2izr_A          160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT  239 (330)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred             eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence            64432211     1234679999999999999999999999999999999999999987655444433333322211111


Q ss_pred             CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          614 MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       614 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ....+     ....     ..+.+++..||+.+|.+||++++|++.|+.+
T Consensus       240 ~~~~~-----~~~~-----p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          240 PIEVL-----CENF-----PEMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             CHHHH-----TTTC-----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             CHHHH-----hccC-----hHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            11100     0001     1567789999999999999999999999644

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.1e-40  Score=360.69  Aligned_cols=259  Identities=18%  Similarity=0.211  Sum_probs=204.7

Q ss_pred             HHHHHhccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC
Q 005236          380 ATIANATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHG  455 (706)
Q Consensus       380 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  455 (706)
                      ..+....++|++.++||+|+||.||+|+... ++.||+|++.+..   ....+.+.+|+.+++.++|||||++++++.+.
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            3444556899999999999999999999864 7899999986521   12234578999999999999999999999999


Q ss_pred             CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                      ...++||||+++|+|.+++...    .+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~  214 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT  214 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             CEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccce
Confidence            9999999999999999998542    4789999999999999999999998   99999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCC----CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ----FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      ++....... ......+||+.|+|||++.+..    ++.++|||||||++|||++|+.||....   .............
T Consensus       215 a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~---~~~~~~~i~~~~~  290 (410)
T 3v8s_A          215 CMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS---LVGTYSKIMNHKN  290 (410)
T ss_dssp             CEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS---HHHHHHHHHTHHH
T ss_pred             eEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC---hhhHHHHHHhccc
Confidence            987643321 1233468999999999998765    8899999999999999999999985432   2222222211110


Q ss_pred             cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCC--CCChhHHHHH
Q 005236          612 EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPED--RPCMPSVILM  659 (706)
Q Consensus       612 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--RPt~~ev~~~  659 (706)
                      ....+..      ...+    ..+.+++..||+.+|.+  ||+++||++.
T Consensus       291 ~~~~p~~------~~~s----~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          291 SLTFPDD------NDIS----KEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HCCCCTT------CCCC----HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             cccCCCc------cccc----HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            1111100      0111    24567889999999988  9999999975

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=2.1e-40  Score=362.48  Aligned_cols=254  Identities=21%  Similarity=0.303  Sum_probs=202.5

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ..++|++.++||+|+||.||++... +++.+|+|++...  .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            4568999999999999999999874 5889999998643  344567889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc---CCCCeEEeeeccccc
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARA  538 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~---~~~~~kl~Dfgla~~  538 (706)
                      |||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++   .++.+||+|||+++.
T Consensus        89 ~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~  162 (444)
T 3soa_A           89 FDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIE  162 (444)
T ss_dssp             ECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred             EEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence            9999999999998654   34899999999999999999999998   99999999999998   568899999999987


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ......  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||....   .........    .+... .
T Consensus       163 ~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~---~~~~~~~i~----~~~~~-~  232 (444)
T 3soa_A          163 VEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED---QHRLYQQIK----AGAYD-F  232 (444)
T ss_dssp             CCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHHHH----HTCCC-C
T ss_pred             ecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHH----hCCCC-C
Confidence            643322  2233679999999999999999999999999999999999999975322   122222111    11110 0


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..+.+. ..+    ..+.+++..||+.||.+|||+.|+++.
T Consensus       233 ~~~~~~-~~s----~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          233 PSPEWD-TVT----PEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             CTTTTT-TSC----HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             Cccccc-cCC----HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            000000 111    245678999999999999999999874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=4.6e-40  Score=353.83  Aligned_cols=250  Identities=22%  Similarity=0.346  Sum_probs=196.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  460 (706)
                      .++|++.++||+|+||.||+|+.+. ++.||||++.+.   .....+.+..|..++.++ +||||+++++++.+.+..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            4689999999999999999999854 778999998653   223345688899999887 89999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++|+|..++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+++...
T Consensus       131 V~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~  204 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL  204 (396)
T ss_dssp             EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence            99999999999999654   34899999999999999999999998   9999999999999999999999999998632


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc--hhHHHHHHHHhhcCCCccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK--LNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  618 (706)
                      ..  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||........  ........+........ +
T Consensus       205 ~~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-~  281 (396)
T 4dc2_A          205 RP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-I  281 (396)
T ss_dssp             CT--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC-C
T ss_pred             cC--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC-C
Confidence            21  1233446899999999999999999999999999999999999999864322111  11111111111111110 0


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM  653 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~  653 (706)
                           ....+    ..+.+++..||+.||.+||++
T Consensus       282 -----p~~~s----~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          282 -----PRSLS----VKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             -----CTTSC----HHHHHHHHHHTCSCTTTSTTC
T ss_pred             -----CCcCC----HHHHHHHHHHhcCCHhHcCCC
Confidence                 01111    245678999999999999996

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2e-40  Score=369.02  Aligned_cols=258  Identities=26%  Similarity=0.414  Sum_probs=210.1

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ..++|++.++||+|+||.||+|++.. +..||||++.... ...+.|.+|+.++++++||||+++++++.+....++|||
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence            34678899999999999999999865 7899999996543 346789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++|+|.+++.... ...+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++......
T Consensus       297 ~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  372 (495)
T 1opk_A          297 FMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT  372 (495)
T ss_dssp             CCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred             ccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence            999999999996533 245889999999999999999999998   9999999999999999999999999998764332


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .. ......+++.|+|||++....++.++||||||++||||++ |+.||......   ......    ..........  
T Consensus       373 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~~~~----~~~~~~~~~~--  442 (495)
T 1opk_A          373 YT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYELL----EKDYRMERPE--  442 (495)
T ss_dssp             EE-CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHHH----HTTCCCCCCT--
T ss_pred             ee-ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HcCCCCCCCC--
Confidence            21 2223456789999999999999999999999999999999 88887643322   222111    1111111100  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                         ..    ...+.+++.+||+.+|.+|||+.+|++.|+.+.
T Consensus       443 ---~~----~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          443 ---GC----PEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             ---TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             ---CC----CHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence               11    134667899999999999999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-40  Score=351.91  Aligned_cols=263  Identities=30%  Similarity=0.433  Sum_probs=208.6

Q ss_pred             hccCCCccceeccCCceeEEEEEe------CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCC
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGE  456 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  456 (706)
                      ..++|.+.+.||+|+||.||+|+.      ..+..||||++... .....+.+.+|+.++.++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            447899999999999999999986      23568999998753 334457899999999999 8999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhccccc--------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccC
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERC--------------------KLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLK  516 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik  516 (706)
                      ..++||||+++|+|.+++......                    ..+++..++.++.||+.||+|||+.+   |+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence            999999999999999999754321                    34789999999999999999999988   9999999


Q ss_pred             CCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCC
Q 005236          517 ASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYH  595 (706)
Q Consensus       517 p~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~  595 (706)
                      |+|||++.++.+||+|||++..+.............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            9999999999999999999987654433333344567889999999999999999999999999999998 999986543


Q ss_pred             CCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          596 SDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      ....   ..   ............     ...    ...+.+++..||+.||.+|||+.||++.|+....
T Consensus       280 ~~~~---~~---~~~~~~~~~~~~-----~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          280 VDAN---FY---KLIQNGFKMDQP-----FYA----TEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             CSHH---HH---HHHHTTCCCCCC-----TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             cHHH---HH---HHHhcCCCCCCC-----CCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            3211   11   111111111110     011    1346678999999999999999999999987633

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.6e-40  Score=350.11  Aligned_cols=251  Identities=21%  Similarity=0.306  Sum_probs=202.7

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch------hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE------QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      +.|.+.+.||+|+||.||+++.. +++.||||++.....      ...+.+.+|+.++++++||||+++++++.+....+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            57999999999999999999985 588999999865322      23678999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC----CeEEeeecc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM----NPKISDFGL  535 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~----~~kl~Dfgl  535 (706)
                      +||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++    .+||+|||+
T Consensus        91 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  164 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL  164 (326)
T ss_dssp             EEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence            999999999999999543   45899999999999999999999988   99999999999999888    899999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      ++.+....   ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .......... .....
T Consensus       165 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~~~~~-~~~~~  237 (326)
T 2y0a_A          165 AHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---QETLANVSAV-NYEFE  237 (326)
T ss_dssp             CEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH---HHHHHHHHHT-CCCCC
T ss_pred             CeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH---HHHHHHHHhc-CCCcC
Confidence            98764322   22335799999999999999999999999999999999999999753221   1111111110 01111


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ...    . ...+    ..+.+++..||+.||.+|||++|+++.
T Consensus       238 ~~~----~-~~~~----~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          238 DEY----F-SNTS----ALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HHH----H-TTSC----HHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ccc----c-ccCC----HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            110    0 0111    245678999999999999999999874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.9e-40  Score=365.17  Aligned_cols=258  Identities=27%  Similarity=0.433  Sum_probs=203.2

Q ss_pred             hccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ..++|++.++||+|+||.||+|+++++..||||++.... ...+.+.+|+.++++++||||+++++++.+ +..++||||
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~  259 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  259 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence            346789999999999999999999888899999997543 335789999999999999999999999865 678999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++|+|.+++.... ...+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.......
T Consensus       260 ~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  335 (452)
T 1fmk_A          260 MSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  335 (452)
T ss_dssp             CTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             hcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence            99999999996432 245889999999999999999999988   99999999999999999999999999987643221


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      . ......++..|+|||++....++.++||||||+++|||++ |+.||.....   .+.....    ..+......    
T Consensus       336 ~-~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~---~~~~~~i----~~~~~~~~~----  403 (452)
T 1fmk_A          336 T-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REVLDQV----ERGYRMPCP----  403 (452)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHHHHH----HTTCCCCCC----
T ss_pred             e-cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH---HHHHHHH----HcCCCCCCC----
Confidence            1 1223456789999999999999999999999999999999 8998754322   1222111    111111110    


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                       ...    ...+.+++.+||+.+|++|||+++|++.|+....
T Consensus       404 -~~~----~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          404 -PEC----PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             -TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             -CCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence             011    1246678999999999999999999999998744

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=2.2e-40  Score=361.04  Aligned_cols=263  Identities=17%  Similarity=0.205  Sum_probs=206.1

Q ss_pred             HHHHHHhccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEe
Q 005236          379 LATIANATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIH  454 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  454 (706)
                      +.++....++|++.++||+|+||.||+|+... ++.||||++.+..   ....+.+.+|+.++..++||||+++++++.+
T Consensus        66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            34445566899999999999999999999865 7889999986522   1223348899999999999999999999999


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                      .+..++||||+++|+|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+|||
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFG  220 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFG  220 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchh
Confidence            99999999999999999999653  245899999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHH
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL  609 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  609 (706)
                      +++.+...... .....+||+.|+|||++.     ...++.++|||||||++|||++|+.||.....   ..........
T Consensus       221 la~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~---~~~~~~i~~~  296 (437)
T 4aw2_A          221 SCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL---VETYGKIMNH  296 (437)
T ss_dssp             TCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHHTH
T ss_pred             hhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh---hHHHHhhhhc
Confidence            99876433221 223367999999999997     56789999999999999999999999864322   2222222111


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCC--CCChhHHHHH
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPED--RPCMPSVILM  659 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--RPt~~ev~~~  659 (706)
                      ......+....     ..+    ..+.+++.+||+.+|.+  ||+++|+++.
T Consensus       297 ~~~~~~p~~~~-----~~s----~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          297 KERFQFPTQVT-----DVS----ENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HHHCCCCSSCC-----CSC----HHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             cccccCCcccc-----cCC----HHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            11111111100     111    24567888999888888  9999999864

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=5.7e-41  Score=356.71  Aligned_cols=247  Identities=25%  Similarity=0.336  Sum_probs=197.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  460 (706)
                      .++|++.++||+|+||.||+|+.. +++.||||++.+.   .....+.+..|..++..+ +||||+++++++.+.+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            478999999999999999999985 4889999998653   334456788999999988 79999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+++...
T Consensus       102 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~  175 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI  175 (353)
T ss_dssp             EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecc
Confidence            99999999999999654   34899999999999999999999998   9999999999999999999999999998642


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC-Ccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM-PSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  619 (706)
                      ..  .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ........   .... .+.  
T Consensus       176 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---~~~~~~i~---~~~~~~p~--  245 (353)
T 3txo_A          176 CN--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE---DDLFEAIL---NDEVVYPT--  245 (353)
T ss_dssp             C-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHH---HCCCCCCT--
T ss_pred             cC--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH---HHHHHHHH---cCCCCCCC--
Confidence            22  1233446799999999999999999999999999999999999999854322   22221111   1111 111  


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh------hHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM------PSVIL  658 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~------~ev~~  658 (706)
                            ..+    ..+.+++..||+.||.+||++      +|+++
T Consensus       246 ------~~~----~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          246 ------WLH----EDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             ------TSC----HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             ------CCC----HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence                  111    245678899999999999998      66664

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=7.3e-40  Score=348.72  Aligned_cols=253  Identities=23%  Similarity=0.287  Sum_probs=201.8

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-----hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-----EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.+.||+|+||.||+|+.. +++.||||++....     ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            57999999999999999999984 58899999985421     1246789999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC---eEEeeeccc
Q 005236          461 IYEFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLA  536 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~---~kl~Dfgla  536 (706)
                      ||||+++++|.+++.... ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.   +||+|||++
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            999999999998886543 2345899999999999999999999998   999999999999987655   999999999


Q ss_pred             cccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      +.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||...    ........    ......
T Consensus       181 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~----~~~~~~~i----~~~~~~  250 (351)
T 3c0i_A          181 IQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT----KERLFEGI----IKGKYK  250 (351)
T ss_dssp             EECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS----HHHHHHHH----HHTCCC
T ss_pred             eEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc----HHHHHHHH----HcCCCC
Confidence            87644322  223457999999999999999999999999999999999999998542    11111111    111110


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                        ..+......+    ..+.+++.+||+.||.+|||+.|+++
T Consensus       251 --~~~~~~~~~s----~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          251 --MNPRQWSHIS----ESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             --CCHHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --CCccccccCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              0000001111    24567899999999999999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=4.2e-41  Score=352.34  Aligned_cols=271  Identities=23%  Similarity=0.337  Sum_probs=200.1

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe----
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE----  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----  457 (706)
                      .++|++.+.||+|+||.||+++. .+++.||||++...   .....+.+.+|+.++++++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            47899999999999999999997 56889999998653   33445688999999999999999999999876654    


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             cEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence            39999999999999999653   35899999999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          538 AFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       538 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      .+...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ..   ............
T Consensus       165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---~~---~~~~~~~~~~~~  238 (311)
T 3ork_A          165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP---VS---VAYQHVREDPIP  238 (311)
T ss_dssp             -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---HH---HHHHHHHCCCCC
T ss_pred             cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---HH---HHHHHhcCCCCC
Confidence            76433221 223345789999999999999999999999999999999999999854221   11   111122221111


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH-HHhcCCCCCCCCCCCCcc
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI-LMLGSEIVLPQPKQPGYL  675 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~-~~L~~~~~~~~p~~p~~~  675 (706)
                      ..   ......+    ..+.+++.+||+.||.+||+..+++ ..|........|..|...
T Consensus       239 ~~---~~~~~~~----~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~~~  291 (311)
T 3ork_A          239 PS---ARHEGLS----ADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVL  291 (311)
T ss_dssp             HH---HHSTTCC----HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSCCCC
T ss_pred             cc---cccCCCC----HHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCCccc
Confidence            00   0001111    2456788999999999999766554 455444333334444443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=4.7e-40  Score=344.43  Aligned_cols=260  Identities=29%  Similarity=0.417  Sum_probs=210.4

Q ss_pred             ccCCCccceeccCCceeEEEEEe------CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  457 (706)
                      .++|++.+.||+|+||.||+|+.      ..++.||||++... .....+.+.+|+.+++++ +||||+++++++.+.+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            46899999999999999999985      34678999998754 334567899999999999 99999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccc---------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          458 KLLIYEFMPNKSLDSFIFDQER---------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                      .++||||+++|+|.+++.....               ...+++..++.++.||+.||.|||+.+   |+||||||+|||+
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence            9999999999999999975432               124899999999999999999999998   9999999999999


Q ss_pred             cCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchh
Q 005236          523 DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLN  601 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~  601 (706)
                      +.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||........  
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--  256 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK--  256 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH--
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH--
Confidence            9999999999999988755443333344567889999999999999999999999999999999 9999764432211  


Q ss_pred             HHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ......    ....... .    ...    ...+.+++.+||+.||.+|||+.||++.|+..
T Consensus       257 ~~~~~~----~~~~~~~-~----~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  305 (313)
T 1t46_A          257 FYKMIK----EGFRMLS-P----EHA----PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (313)
T ss_dssp             HHHHHH----HTCCCCC-C----TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHhc----cCCCCCC-c----ccC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            111111    1111000 0    011    12466789999999999999999999999865

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-40  Score=355.46  Aligned_cols=253  Identities=22%  Similarity=0.297  Sum_probs=205.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            468999999999999999999985 5889999998776666667899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC--CCCeEEeeeccccccCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ--DMNPKISDFGLARAFGGD  542 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~--~~~~kl~Dfgla~~~~~~  542 (706)
                      +++|+|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.  ++.+||+|||+++.+...
T Consensus       130 ~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          130 LSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             CCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            99999999985432  35889999999999999999999998   999999999999974  578999999999876433


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .   ......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ........... .........   
T Consensus       205 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~---~~~~~~~i~~~-~~~~~~~~~---  274 (387)
T 1kob_A          205 E---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED---DLETLQNVKRC-DWEFDEDAF---  274 (387)
T ss_dssp             S---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS---HHHHHHHHHHC-CCCCCSSTT---
T ss_pred             c---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC---HHHHHHHHHhC-CCCCCcccc---
Confidence            2   2233578999999999999999999999999999999999999985422   12222211111 000000110   


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        ...+    ..+.+++..||+.||.+|||+.|+++.
T Consensus       275 --~~~s----~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          275 --SSVS----PEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             --TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             --ccCC----HHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence              1111    246689999999999999999999874

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=4.8e-40  Score=340.47  Aligned_cols=260  Identities=28%  Similarity=0.448  Sum_probs=194.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.++||+|+||.||+|+...  .||||++..  ......+.+.+|+.++++++||||+++++++ .....++|||
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence            4689999999999999999998754  599999864  3455667899999999999999999999965 5667899999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++...  ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus       100 ~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  174 (289)
T 3og7_A          100 WCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS  174 (289)
T ss_dssp             CCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred             ecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccccc
Confidence            99999999999543  245899999999999999999999988   9999999999999999999999999998764333


Q ss_pred             CcccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      .........||+.|+|||.+.   ...++.++||||||+++|||++|+.||......  ..................+. 
T Consensus       175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~-  251 (289)
T 3og7_A          175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQIIEMVGRGSLSPDLSKVR-  251 (289)
T ss_dssp             ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--HHHHHHHHHTSCCCCTTSSC-
T ss_pred             ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--HHHHHHhcccccCcchhhcc-
Confidence            333334467999999999986   667899999999999999999999998543221  11111111111111111111 


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                          ...    ...+.+++..||+.+|.+|||+.+|++.|+.+.
T Consensus       252 ----~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          252 ----SNC----PKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             ----TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             ----ccC----CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence                111    135668899999999999999999999998763

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=5.1e-40  Score=347.72  Aligned_cols=262  Identities=27%  Similarity=0.421  Sum_probs=210.4

Q ss_pred             hccCCCccceeccCCceeEEEEEeC--------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA--------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIH  454 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  454 (706)
                      ..++|++.+.||+|+||.||+|+..        +++.||||++... .....+.+.+|+.+++++ +||||+++++++.+
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            3478999999999999999999863        4678999999753 445567899999999999 89999999999999


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEE
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQER-------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVL  521 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nil  521 (706)
                      .+..++||||+++++|.+++.....             ...+++..++.++.||+.||+|||+.+   |+||||||+|||
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl  189 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL  189 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence            9999999999999999999975432             234889999999999999999999998   999999999999


Q ss_pred             EcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCch
Q 005236          522 LDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKL  600 (706)
Q Consensus       522 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~  600 (706)
                      ++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....   .
T Consensus       190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~  266 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---E  266 (334)
T ss_dssp             ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH---H
T ss_pred             EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH---H
Confidence            99999999999999987654433333344567889999999999999999999999999999999 9998754321   1


Q ss_pred             hHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          601 NLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      .....    ..........     ...    ...+.+++.+||+.+|.+|||+.||++.|+.+..
T Consensus       267 ~~~~~----~~~~~~~~~~-----~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          267 ELFKL----LKEGHRMDKP-----ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             HHHHH----HHHTCCCCCC-----TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHH----HhcCCCCCCC-----ccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            11111    1111111111     111    1246678899999999999999999999987743

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=2.2e-40  Score=349.46  Aligned_cols=265  Identities=26%  Similarity=0.361  Sum_probs=209.7

Q ss_pred             cCCCccceeccCCceeEEEEEe-----CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe--CCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH--GEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~  459 (706)
                      ++|++.++||+|+||.||+++.     ..++.||||++........+.+.+|+.++++++||||+++++++..  ....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            6899999999999999999984     4578999999988777777889999999999999999999999874  45689


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +||||+++++|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus       103 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             EEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence            9999999999999996533  35899999999999999999999988   999999999999999999999999999876


Q ss_pred             CCCCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC--------CchhHHHHHHHHh
Q 005236          540 GGDETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSD--------NKLNLIRHAWKLW  610 (706)
Q Consensus       540 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~--------~~~~~~~~~~~~~  610 (706)
                      ...... .......+|+.|+|||++.+..++.++||||||+++|||++|+.|+......        .............
T Consensus       178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (327)
T 3lxl_A          178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL  257 (327)
T ss_dssp             CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred             ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence            433221 1233356888899999999999999999999999999999999986432110        0001111111121


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      ........         .......+.+++..||+.||.+|||++||++.|+.+..
T Consensus       258 ~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          258 EEGQRLPA---------PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             hcccCCCC---------CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            12111111         01112346678999999999999999999999987743

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.4e-40  Score=340.42  Aligned_cols=255  Identities=25%  Similarity=0.386  Sum_probs=204.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .++|++.+.||+|+||.||++...++..||||++..... ..+++.+|+.++.+++||||+++++++.+....++||||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            468999999999999999999999888999999975432 3467899999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++....  ..+++..++.++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++....... 
T Consensus       102 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~-  175 (283)
T 3gen_A          102 ANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-  175 (283)
T ss_dssp             TTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-
T ss_pred             CCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEcccccccccccccc-
Confidence            9999999996532  35899999999999999999999988   99999999999999999999999999987643211 


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                      .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......   .......    ....... .    
T Consensus       176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~----~~~~~~~-~----  243 (283)
T 3gen_A          176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETAEHIA----QGLRLYR-P----  243 (283)
T ss_dssp             HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHHHH----TTCCCCC-C----
T ss_pred             ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh---HHHHHHh----cccCCCC-C----
Confidence            12223456788999999999999999999999999999998 99997543321   1111111    1111000 0    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...    ...+.+++.+||+.+|.+|||++|+++.|+.+
T Consensus       244 ~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          244 HLA----SEKVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             TTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcC----CHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            011    12466789999999999999999999999764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=6.2e-40  Score=336.18  Aligned_cols=253  Identities=30%  Similarity=0.480  Sum_probs=195.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccc----hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS----EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||.||+|+.. ++.||||++....    ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            368999999999999999999985 7899999986532    23357889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC--------CCCeEEeee
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ--------DMNPKISDF  533 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~--------~~~~kl~Df  533 (706)
                      |||+++++|.+++..    ..+++..++.++.|++.||+|||+++..+|+||||||+|||++.        ++.+||+||
T Consensus        85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            999999999999843    35899999999999999999999987556899999999999986        778999999


Q ss_pred             ccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      |+++......    .....||+.|+|||.+.+..++.++||||||+++|||++|+.||.....   ...   ........
T Consensus       161 g~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~---~~~~~~~~  230 (271)
T 3dtc_A          161 GLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG---LAV---AYGVAMNK  230 (271)
T ss_dssp             CC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH---HHH---HHHHHTSC
T ss_pred             Cccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHH---HHhhhcCC
Confidence            9998654322    2235689999999999999999999999999999999999999854221   111   11111111


Q ss_pred             CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          614 MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       614 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      .......     ..    ...+.+++.+||+.+|.+|||+.|+++.|+.
T Consensus       231 ~~~~~~~-----~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          231 LALPIPS-----TC----PEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             CCCCCCT-----TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             CCCCCCc-----cc----CHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            1111111     11    1246678999999999999999999999975

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=2.5e-40  Score=353.45  Aligned_cols=252  Identities=23%  Similarity=0.355  Sum_probs=202.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||+|++..  ......+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            468999999999999999999985 588999999864  34455678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC---CeEEeeecccccc
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM---NPKISDFGLARAF  539 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~---~~kl~Dfgla~~~  539 (706)
                      ||+++|+|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++   .+||+|||+++..
T Consensus       108 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~  181 (362)
T 2bdw_A          108 DLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  181 (362)
T ss_dssp             CCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred             ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence            999999999998543   35889999999999999999999998   99999999999998654   5999999999876


Q ss_pred             CCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ....   ......||+.|+|||++.+..++.++|||||||++|||++|+.||....   .........    .+... ..
T Consensus       182 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~---~~~~~~~i~----~~~~~-~~  250 (362)
T 2bdw_A          182 NDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED---QHRLYAQIK----AGAYD-YP  250 (362)
T ss_dssp             TTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHH----HTCCC-CC
T ss_pred             cCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHH----hCCCC-CC
Confidence            4322   2233579999999999999999999999999999999999999975322   112221111    11110 00


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+.+ ...+    ..+.+++.+||+.||.+|||+.|+++.
T Consensus       251 ~~~~-~~~~----~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          251 SPEW-DTVT----PEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             TTGG-GGSC----HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             cccc-cCCC----HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0000 0111    245678999999999999999998754

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=2e-40  Score=348.87  Aligned_cols=264  Identities=27%  Similarity=0.438  Sum_probs=211.4

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG  455 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  455 (706)
                      ....++|++.+.||+|+||.||+|+..      .++.||||++... .......+.+|+.++++++||||+++++++.+.
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            345578999999999999999999864      3678999999753 344556789999999999999999999999999


Q ss_pred             CeeEEEEecCCCCChhhhhhcccc-------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQER-------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      +..++||||+++++|.+++.....       ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCE
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeE
Confidence            999999999999999999965322       245789999999999999999999998   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.|+.....   ......  
T Consensus       178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~--  252 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN---EQVLRF--  252 (322)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH---HHHHHH--
T ss_pred             EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH---HHHHHH--
Confidence            9999999987643332223334567889999999999999999999999999999999 8888754221   111111  


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                        ...........     ..    ...+.+++.+||+.+|.+|||+.|+++.|+....
T Consensus       253 --~~~~~~~~~~~-----~~----~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          253 --VMEGGLLDKPD-----NC----PDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             --HHTTCCCCCCT-----TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             --HHcCCcCCCCC-----CC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence              11111111111     11    1245678999999999999999999999997644

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.7e-39  Score=344.55  Aligned_cols=249  Identities=22%  Similarity=0.349  Sum_probs=198.6

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.+.||+|+||.||+++.. +++.||||++.+.   .....+.+.+|..++.++ +||||+++++++.+.+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            57999999999999999999985 4789999998653   344567788999999988 899999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+++....
T Consensus        89 ~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~  162 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  162 (345)
T ss_dssp             ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred             EeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence            9999999999999653   34899999999999999999999998   99999999999999999999999999986422


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc--hhHHHHHHHHhhcCCCcccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK--LNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ..  .......||+.|+|||++.+..++.++|||||||++|||++|+.||........  ..........+...... + 
T Consensus       163 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-~-  238 (345)
T 3a8x_A          163 PG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-I-  238 (345)
T ss_dssp             TT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC-C-
T ss_pred             CC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC-C-
Confidence            21  223346799999999999999999999999999999999999999864322111  01111111111111111 0 


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM  653 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~  653 (706)
                          ....+    ..+.+++.+||+.||.+||++
T Consensus       239 ----p~~~s----~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          239 ----PRSLS----VKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             ----CTTSC----HHHHHHHHHHTCSSTTTSTTC
T ss_pred             ----CCCCC----HHHHHHHHHHhcCCHhHCCCC
Confidence                01111    245678899999999999996

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=9.2e-40  Score=359.58  Aligned_cols=250  Identities=26%  Similarity=0.379  Sum_probs=203.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC-eeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE-EKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e~  464 (706)
                      .++|++.++||+|+||.||+|... ++.||||+++...  ..+.+.+|+.++++++||||+++++++.+.. ..++||||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~  268 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY  268 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence            467899999999999999999985 6799999997543  4578999999999999999999999988765 78999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++|+|.+++.... ...+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.....  
T Consensus       269 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--  342 (450)
T 1k9a_A          269 MAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--  342 (450)
T ss_dssp             CTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             cCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence            99999999997543 244789999999999999999999998   999999999999999999999999999864321  


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                         .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+.   .....    .+......+   
T Consensus       343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~---~~~i~----~~~~~~~p~---  409 (450)
T 1k9a_A          343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---VPRVE----KGYKMDAPD---  409 (450)
T ss_dssp             -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH---HHHHH----TTCCCCCCT---
T ss_pred             ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHH----cCCCCCCCC---
Confidence               122357889999999999999999999999999999998 9999865443322   21111    111111111   


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                        ..    ...+.+++..||+.||.+|||+.+|++.|+.+
T Consensus       410 --~~----~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          410 --GC----PPAVYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             --TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --cC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence              11    12466789999999999999999999999865

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.2e-40  Score=352.98  Aligned_cols=249  Identities=25%  Similarity=0.349  Sum_probs=201.4

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCee
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  458 (706)
                      ...++|.+.+.||+|+||.||+|+.+ +++.||||++++..   ....+.+..|..++..+ +||||+++++++.+.+..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            34579999999999999999999985 58899999986532   33456788899999887 899999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++++||+|||+++.
T Consensus        94 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence            9999999999999999653   34889999999999999999999998   99999999999999999999999999986


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   .........  .....+. 
T Consensus       168 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~~i~~--~~~~~p~-  239 (345)
T 1xjd_A          168 NMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE---EELFHSIRM--DNPFYPR-  239 (345)
T ss_dssp             CCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHH--CCCCCCT-
T ss_pred             cccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHh--CCCCCCc-
Confidence            43221  223446799999999999999999999999999999999999999854221   122211111  0111111 


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChh-HHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMP-SVI  657 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~-ev~  657 (706)
                             ..+    ..+.+++..||+.||.+||++. +|+
T Consensus       240 -------~~s----~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          240 -------WLE----KEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             -------TSC----HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             -------ccC----HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence                   111    2456789999999999999998 665

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-40  Score=345.97  Aligned_cols=245  Identities=24%  Similarity=0.338  Sum_probs=201.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||.||+++.. +++.||+|++.+..   ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            367999999999999999999985 58899999986532   23456788999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++++||+|||+++....
T Consensus        85 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           85 MDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             ECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             EeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            9999999999999653   34889999999999999999999988   99999999999999999999999999987532


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                           ......||+.|+|||++.+..++.++||||||+++|||++|+.||....   .......   .......  +   
T Consensus       159 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~---~~~~~~~---i~~~~~~--~---  222 (318)
T 1fot_A          159 -----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN---TMKTYEK---ILNAELR--F---  222 (318)
T ss_dssp             -----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS---HHHHHHH---HHHCCCC--C---
T ss_pred             -----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---HHHHHHH---HHhCCCC--C---
Confidence                 2234679999999999999999999999999999999999999985322   1121111   1111110  0   


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~  658 (706)
                        ....+    ..+.+++.+||+.||.+||     +++||++
T Consensus       223 --p~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          223 --PPFFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             --CTTSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             --CCCCC----HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence              01111    2456788999999999999     8888874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.3e-40  Score=342.70  Aligned_cols=261  Identities=24%  Similarity=0.349  Sum_probs=198.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.++||+|+||.||+|+...++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            5799999999999999999999889999999986532  23346788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++ +|.+++....  ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.......
T Consensus        82 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  155 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR  155 (288)
T ss_dssp             CSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             cCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence            986 8988885432  45889999999999999999999988   99999999999999999999999999987643211


Q ss_pred             cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc---cc--
Q 005236          545 EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS---QL--  618 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--  618 (706)
                        ......||+.|+|||++.+. .++.++||||||+++|||++|+.||.....   .................   ..  
T Consensus       156 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T 1ob3_A          156 --KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE---ADQLMRIFRILGTPNSKNWPNVTE  230 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             --ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHHCCCChhhchhhhc
Confidence              22235689999999999764 589999999999999999999999854322   22222222221111100   00  


Q ss_pred             ---cccccc-------CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          619 ---IDACFK-------DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       619 ---~d~~~~-------~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                         .++...       ..........+.+++.+||+.||.+|||++|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence               000000       0000001124568999999999999999999986

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.3e-39  Score=349.25  Aligned_cols=249  Identities=23%  Similarity=0.359  Sum_probs=202.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||+++... ++.||+|++...   .....+.+.+|+.+++.++|||||++++++.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            689999999999999999999854 788999998653   2334578889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+||||+.++++||+|||+++.+...
T Consensus        95 e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  168 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE  168 (384)
T ss_dssp             CCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence            999999999999653   34899999999999999999999998   999999999999999999999999999876432


Q ss_pred             CCcccccccccccCccCcccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASD---GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                         .......||+.|+|||++..   ..++.++|||||||++|||++|+.||..................  ....+.  
T Consensus       169 ---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~p~--  241 (384)
T 4fr4_A          169 ---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT--VVTYPS--  241 (384)
T ss_dssp             ---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC--CCCCCT--
T ss_pred             ---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc--ccCCCC--
Confidence               22334679999999999974   46899999999999999999999998654443333222221111  000111  


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-hhHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-MPSVIL  658 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-~~ev~~  658 (706)
                            ..+    ..+.+++..||+.||.+||+ +++|..
T Consensus       242 ------~~s----~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          242 ------AWS----QEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             ------TSC----HHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             ------cCC----HHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence                  111    24667899999999999999 677664

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.8e-40  Score=343.53  Aligned_cols=251  Identities=23%  Similarity=0.390  Sum_probs=202.8

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-C-------cEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-E-------QEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      ++|.+.+.||+|+||.||+|+... +       ..||+|++........+.+.+|+.++++++||||+++++++.+.+..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            679999999999999999998754 2       46999999877777778999999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC--------eEE
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN--------PKI  530 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~--------~kl  530 (706)
                      ++||||+++++|.+++....  ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.        +||
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl  162 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL  162 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred             EEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeee
Confidence            99999999999999996543  34889999999999999999999998   999999999999998887        999


Q ss_pred             eeeccccccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHH
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL  609 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  609 (706)
                      +|||++.....      .....+|+.|+|||++.+ ..++.++||||||+++|||++|..|+...  ......... .. 
T Consensus       163 ~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~--~~~~~~~~~-~~-  232 (289)
T 4fvq_A          163 SDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA--LDSQRKLQF-YE-  232 (289)
T ss_dssp             CCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT--SCHHHHHHH-HH-
T ss_pred             ccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc--cchHHHHHH-hh-
Confidence            99999875421      223568899999999987 77999999999999999999966553221  111111111 11 


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                       ..........            ..+.+++..||+.||.+|||++|+++.|+.+..
T Consensus       233 -~~~~~~~~~~------------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          233 -DRHQLPAPKA------------AELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             -TTCCCCCCSS------------CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             -ccCCCCCCCC------------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence             1111111111            134578889999999999999999999997644

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1e-39  Score=337.49  Aligned_cols=255  Identities=27%  Similarity=0.520  Sum_probs=200.4

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchh-------hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQ-------GLKELKNEIILFSKLQHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  457 (706)
                      .++|++.+.||+|+||.||+|++ .+++.||||++......       ..+.+.+|+.++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            36899999999999999999998 46889999998643221       1267899999999999999999999985544 


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC-----eEEee
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN-----PKISD  532 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~-----~kl~D  532 (706)
                       ++||||+++++|.+++....  ..+++..++.++.|++.||+|||+.+ .+|+||||||+|||++.++.     +||+|
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             -eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence             79999999999999886533  46899999999999999999999875 34999999999999988876     99999


Q ss_pred             eccccccCCCCCcccccccccccCccCcccc--ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYA--SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      ||+++....     ......||+.|+|||++  ....++.++||||||+++|||++|+.||........ .....   ..
T Consensus       173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~---~~  243 (287)
T 4f0f_A          173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFINM---IR  243 (287)
T ss_dssp             CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-HHHHH---HH
T ss_pred             CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-HHHHH---Hh
Confidence            999985422     22335789999999998  445678999999999999999999999865433221 11111   11


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .......+..     ..    ...+.+++..||+.||.+|||++||++.|+.+
T Consensus       244 ~~~~~~~~~~-----~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          244 EEGLRPTIPE-----DC----PPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HSCCCCCCCT-----TS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             ccCCCCCCCc-----cc----CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            1111111111     11    12466789999999999999999999999753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.7e-39  Score=336.80  Aligned_cols=262  Identities=22%  Similarity=0.293  Sum_probs=199.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.++||+|+||.||+|+.. +++.||||++...  .....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            57999999999999999999985 5889999998643  33445788899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++ +|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......
T Consensus        82 ~~~~-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  155 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             CCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred             cCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence            9986 555554332  245899999999999999999999998   9999999999999999999999999998764322


Q ss_pred             CcccccccccccCccCccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc---c
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL---I  619 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  619 (706)
                        .......||+.|+|||++.+.. ++.++||||||+++|||++|..|+..  .......................   .
T Consensus       156 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~  231 (292)
T 3o0g_A          156 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP--GNDVDDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             --SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC--CSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             --ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC--CCCHHHHHHHHHHHhCCCChhhhhhhc
Confidence              2223357899999999998765 89999999999999999999888532  22222333333322221111100   0


Q ss_pred             ---ccc---------ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          620 ---DAC---------FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       620 ---d~~---------~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                         +..         ............+.+++.+||+.||++|||++|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence               000         000000011234568999999999999999999986

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=346.54  Aligned_cols=252  Identities=27%  Similarity=0.361  Sum_probs=196.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCC--cceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQH--RNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||.||++...+++.||||++..  ......+.+.+|+.++.+++|  |||+++++++.+....++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            467999999999999999999998899999999854  345556789999999999986  9999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      || +.+++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++ ++.+||+|||+++.+..
T Consensus        88 ~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             EC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred             Ee-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence            99 5688999999653   35889999999999999999999998   99999999999997 67899999999987654


Q ss_pred             CCCcccccccccccCccCcccccc-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASD-----------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      ...........||+.|+|||++.+           ..++.++||||||+++|||++|+.||.....     .........
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~~  234 (343)
T 3dbq_A          160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAII  234 (343)
T ss_dssp             ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHH
T ss_pred             ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHHHHHHh
Confidence            433333445679999999999865           6789999999999999999999999853221     112222222


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .........+     ..    ...+.+++..||+.||.+|||+.|+++.
T Consensus       235 ~~~~~~~~~~-----~~----~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          235 DPNHEIEFPD-----IP----EKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             CTTSCCCCCC-----CS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cCCcccCCcc-----cC----CHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            1111111111     11    1245678999999999999999999865

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=4.4e-40  Score=349.63  Aligned_cols=244  Identities=22%  Similarity=0.247  Sum_probs=201.8

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||+++.. +++.||||++.+..   ....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            68999999999999999999985 58899999986532   234577889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus       121 e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~  194 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             ECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC
Confidence            999999999999654   34889999999999999999999988   999999999999999999999999999876432


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                           .....||+.|+|||++.+..++.++||||||+++|||++|+.||....   .........    .+... +    
T Consensus       195 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~---~~~~~~~i~----~~~~~-~----  257 (350)
T 1rdq_E          195 -----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ---PIQIYEKIV----SGKVR-F----  257 (350)
T ss_dssp             -----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHH----HCCCC-C----
T ss_pred             -----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC---HHHHHHHHH----cCCCC-C----
Confidence                 234679999999999999999999999999999999999999985322   112211111    11110 0    


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~  658 (706)
                       ....+    ..+.+++.+||+.||.+||+     ++||++
T Consensus       258 -p~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          258 -PSHFS----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -CTTCC----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -CCCCC----HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence             01111    24567899999999999998     888875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.8e-39  Score=337.67  Aligned_cols=249  Identities=26%  Similarity=0.369  Sum_probs=193.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch--------------------------hhHHHHHHHHHHHh
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE--------------------------QGLKELKNEIILFS  438 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~  438 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.....                          ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            478999999999999999999974 578999999864321                          12356889999999


Q ss_pred             hcCCcceeeeEeEEEe--CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccC
Q 005236          439 KLQHRNLVKLLGCCIH--GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLK  516 (706)
Q Consensus       439 ~l~h~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik  516 (706)
                      +++||||+++++++.+  ....++||||+++++|.+++.    ...+++..++.++.||+.||+|||+.+   |+|||||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlk  164 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIK  164 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCC
Confidence            9999999999999987  568899999999999988763    245899999999999999999999998   9999999


Q ss_pred             CCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCC---CCcchhhHHHHHHHHHHHhCCCCCCC
Q 005236          517 ASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ---FSVKSDVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       517 p~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~~sDv~SlGvil~elltG~~p~~~  593 (706)
                      |+|||++.++.+||+|||+++.+.....  ......||+.|+|||++.+..   ++.++||||||+++|||++|+.||..
T Consensus       165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          165 PSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            9999999999999999999987643321  223357999999999997765   47889999999999999999999753


Q ss_pred             CCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          594 YHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..   .......    ....... ...   ....+    ..+.+++.+||+.||++|||+.|+++
T Consensus       243 ~~---~~~~~~~----~~~~~~~-~~~---~~~~~----~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          243 ER---IMCLHSK----IKSQALE-FPD---QPDIA----EDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             SS---HHHHHHH----HHHCCCC-CCS---SSCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cc---HHHHHHH----HhcccCC-CCC---ccccC----HHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            21   1111111    1111110 000   01111    24667899999999999999999875

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=5.1e-40  Score=344.99  Aligned_cols=260  Identities=25%  Similarity=0.357  Sum_probs=188.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            368999999999999999999985 58899999986533 2334678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccc---ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          464 FMPNKSLDSFIFDQE---RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |++ ++|.+++....   ....+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 59999986532   1235889999999999999999999988   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC---CCc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG---MPS  616 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~  616 (706)
                      ....  ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......   .............   ...
T Consensus       160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE---EQLKLIFDIMGTPNESLWP  234 (317)
T ss_dssp             SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCSCCTTTCG
T ss_pred             CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCChhHhh
Confidence            3221  2233578999999999976 46899999999999999999999998643322   2222222211110   000


Q ss_pred             c---------------------cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          617 Q---------------------LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       617 ~---------------------~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .                     .+.+......    ...+.+++.+||+.||.+|||++|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPL----DGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCC----CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhhhhcccccccccchhHHHhhcccccccC----CHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            0                     0000001111    125678999999999999999999875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=7e-40  Score=350.87  Aligned_cols=267  Identities=18%  Similarity=0.227  Sum_probs=205.0

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCccchhhH-----------HHHHHHHHHHhhcCCcceee
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKISEQGL-----------KELKNEIILFSKLQHRNLVK  447 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~  447 (706)
                      ..++|++.++||+|+||.||+|++..      ++.||||++........           ..+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34689999999999999999998865      47899999865432211           12345666778889999999


Q ss_pred             eEeEEEeC----CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc
Q 005236          448 LLGCCIHG----EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD  523 (706)
Q Consensus       448 l~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~  523 (706)
                      +++++...    ...++||||+ +++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+||||+
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~  186 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLN  186 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEe
Confidence            99999875    4579999999 99999999653  245899999999999999999999998   99999999999999


Q ss_pred             --CCCCeEEeeeccccccCCCCCcc-----cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCC
Q 005236          524 --QDMNPKISDFGLARAFGGDETEG-----NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHS  596 (706)
Q Consensus       524 --~~~~~kl~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~  596 (706)
                        .++.+||+|||+++.+.......     ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~  266 (364)
T 3op5_A          187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK  266 (364)
T ss_dssp             SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred             cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence              88999999999998764322111     11334599999999999999999999999999999999999999864332


Q ss_pred             CCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          597 DNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       597 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..  .......... ......+++.++....-.   ..+.+++..||+.+|.+||++++|++.|+.+
T Consensus       267 ~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~  327 (364)
T 3op5_A          267 DP--KYVRDSKIRY-RENIASLMDKCFPAANAP---GEIAKYMETVKLLDYTEKPLYENLRDILLQG  327 (364)
T ss_dssp             CH--HHHHHHHHHH-HHCHHHHHHHHSCTTCCC---HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             CH--HHHHHHHHHh-hhhHHHHHHHhcccccCH---HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            21  1222111111 122334444443222111   2456788899999999999999999999866

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=5.6e-40  Score=352.10  Aligned_cols=246  Identities=24%  Similarity=0.286  Sum_probs=195.1

Q ss_pred             cceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          392 NKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      .+.||+|+||.||+|+.. +++.||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||+++++|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            578999999999999974 5889999999876666778899999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE--cCCCCeEEeeeccccccCCCCCcccc
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL--DQDMNPKISDFGLARAFGGDETEGNT  548 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill--~~~~~~kl~Dfgla~~~~~~~~~~~~  548 (706)
                      .+++....  ..+++..++.++.||++||+|||+.+   |+||||||+|||+  +.++.+||+|||+++.+.....   .
T Consensus       174 ~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~  245 (373)
T 2x4f_A          174 FDRIIDES--YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---L  245 (373)
T ss_dssp             HHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---C
T ss_pred             HHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---c
Confidence            99886432  35889999999999999999999988   9999999999999  6778999999999987643322   2


Q ss_pred             cccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCC
Q 005236          549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFN  628 (706)
Q Consensus       549 ~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  628 (706)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ........   .....  +....+ ...+
T Consensus       246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~---~~~~~~i~---~~~~~--~~~~~~-~~~~  316 (373)
T 2x4f_A          246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND---AETLNNIL---ACRWD--LEDEEF-QDIS  316 (373)
T ss_dssp             CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHH---HTCCC--SCSGGG-TTSC
T ss_pred             ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHH---hccCC--CChhhh-ccCC
Confidence            235699999999999999999999999999999999999999854321   12221111   11110  001111 1111


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          629 LAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       629 ~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                          ..+.+++.+||+.||.+|||++|+++
T Consensus       317 ----~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          317 ----EEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             ----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ----HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                24667899999999999999999987

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.5e-40  Score=353.85  Aligned_cols=207  Identities=27%  Similarity=0.335  Sum_probs=179.3

Q ss_pred             ccHHHHHHhccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-----CcceeeeEe
Q 005236          377 FELATIANATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-----HRNLVKLLG  450 (706)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~  450 (706)
                      +.+.+.....++|.+.++||+|+||.||+|+. .+++.||||++.. .....+.+..|+.+++.++     ||||+++++
T Consensus        25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence            44444455668999999999999999999998 4588999999864 3344567788999999997     999999999


Q ss_pred             EEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC------
Q 005236          451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ------  524 (706)
Q Consensus       451 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~------  524 (706)
                      ++...+..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.      
T Consensus       104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~  178 (360)
T 3llt_A          104 KFMYYDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKS  178 (360)
T ss_dssp             EEEETTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEE
T ss_pred             eeeECCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccccccc
Confidence            999999999999999 999999996543 235889999999999999999999988   999999999999976      


Q ss_pred             -------------------CCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHH
Q 005236          525 -------------------DMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIV  585 (706)
Q Consensus       525 -------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ell  585 (706)
                                         ++.+||+|||+++.....     .....||+.|+|||++.+..++.++|||||||++|||+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  253 (360)
T 3llt_A          179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY  253 (360)
T ss_dssp             EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred             ccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence                               889999999999864322     22357899999999999999999999999999999999


Q ss_pred             hCCCCCCCC
Q 005236          586 SGKKNRGFY  594 (706)
Q Consensus       586 tG~~p~~~~  594 (706)
                      +|+.||...
T Consensus       254 ~g~~pf~~~  262 (360)
T 3llt_A          254 TGSLLFRTH  262 (360)
T ss_dssp             HSSCSCCCS
T ss_pred             HCCCCCCCC
Confidence            999998643

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=8.9e-40  Score=336.56  Aligned_cols=255  Identities=31%  Similarity=0.465  Sum_probs=205.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .++|++.+.||+|+||.||+|+..+++.||||++.... ...+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence            36899999999999999999999888899999986533 34578999999999999999999999976 55689999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++++|.+++.... ...+++..++.++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++........
T Consensus        90 ~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T 1qpc_A           90 ENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT  165 (279)
T ss_dssp             TTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred             CCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence            9999999996432 235889999999999999999999998   999999999999999999999999999876433221


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                       ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.....   .......    ........ .    
T Consensus       166 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~~----~~~~~~~~-~----  232 (279)
T 1qpc_A          166 -AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN---PEVIQNL----ERGYRMVR-P----  232 (279)
T ss_dssp             -CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHHHHH----HTTCCCCC-C----
T ss_pred             -cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH---HHHHHHH----hcccCCCC-c----
Confidence             2223456789999999998999999999999999999999 8888754221   1222111    11111110 0    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...    ...+.+++..||+.+|++|||+.+|++.|+..
T Consensus       233 ~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  267 (279)
T 1qpc_A          233 DNC----PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (279)
T ss_dssp             TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccc----cHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            111    12466789999999999999999999999876

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.5e-40  Score=356.93  Aligned_cols=262  Identities=18%  Similarity=0.199  Sum_probs=204.4

Q ss_pred             HHHHHHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEe
Q 005236          379 LATIANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIH  454 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  454 (706)
                      +.+.....++|++.++||+|+||.||+++.+ +++.||||++.+..   ....+.+.+|..++..++||||+++++++.+
T Consensus        53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD  132 (412)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            3344455689999999999999999999985 58999999986532   2234468899999999999999999999999


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                      .+..++||||+++|+|.+++....  ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+|||
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFG  207 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFG  207 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeech
Confidence            999999999999999999996532  35889999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccc-------cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYAS-------DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~  607 (706)
                      +++.+..... ......+||+.|+|||++.       ...++.++|||||||++|||++|+.||.....   ........
T Consensus       208 la~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~---~~~~~~i~  283 (412)
T 2vd5_A          208 SCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST---AETYGKIV  283 (412)
T ss_dssp             TCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHH
T ss_pred             hheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH---HHHHHHHH
Confidence            9987643322 1223457999999999997       35789999999999999999999999854322   22222211


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCC---CChhHHHHH
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDR---PCMPSVILM  659 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R---Pt~~ev~~~  659 (706)
                      ........+.     .....+    ..+.+++.+||+ +|.+|   |+++|+++.
T Consensus       284 ~~~~~~~~p~-----~~~~~s----~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          284 HYKEHLSLPL-----VDEGVP----EEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             THHHHCCCC---------CCC----HHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             hcccCcCCCc-----cccCCC----HHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            1100111110     001111    245678899999 99998   688888753

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.5e-39  Score=345.77  Aligned_cols=253  Identities=23%  Similarity=0.292  Sum_probs=192.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.++||+|+||.||+++.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+....++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            468999999999999999999986 68899999986533 2236788999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC--eEEeeeccccccCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN--PKISDFGLARAFGGD  542 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~--~kl~Dfgla~~~~~~  542 (706)
                      +++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.  +||+|||+++.....
T Consensus        98 ~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~  171 (361)
T 3uc3_A           98 ASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH  171 (361)
T ss_dssp             CCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred             CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence            9999999999653   34899999999999999999999988   999999999999987775  999999999753221


Q ss_pred             CCcccccccccccCccCccccccCCCCcc-hhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVK-SDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~-sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                         .......||+.|+|||++.+..++.+ +||||||+++|||++|+.||............  ..........  +.. 
T Consensus       172 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~--~~~~~~~~~~--~~~-  243 (361)
T 3uc3_A          172 ---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKT--IQRILSVKYS--IPD-  243 (361)
T ss_dssp             ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHH--HHHHHTTCCC--CCT-
T ss_pred             ---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHH--HHHHhcCCCC--CCC-
Confidence               12233579999999999988888766 89999999999999999998654333222221  1111111110  000 


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .  ...    ...+.+++.+||+.||.+|||++|+++.
T Consensus       244 ~--~~~----s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          244 D--IRI----SPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             T--SCC----CHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             c--CCC----CHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            0  001    1245679999999999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=9.1e-40  Score=340.51  Aligned_cols=263  Identities=25%  Similarity=0.371  Sum_probs=204.5

Q ss_pred             cCCCccceeccCCceeEEEEEe-----CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--Cee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEK  458 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  458 (706)
                      +.|++.++||+|+||.||+|++     ..++.||||++... .....+.+.+|+.++++++||||+++++++.+.  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            5689999999999999999983     45889999998753 334567899999999999999999999999876  668


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++++|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccc
Confidence            99999999999999995433  45899999999999999999999998   99999999999999999999999999988


Q ss_pred             cCCCCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--------CCCchhHHHHHHHH
Q 005236          539 FGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYH--------SDNKLNLIRHAWKL  609 (706)
Q Consensus       539 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~--------~~~~~~~~~~~~~~  609 (706)
                      ....... .......+|..|+|||.+.+..++.++||||||+++|||++|+.|+....        ..............
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (302)
T 4e5w_A          176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT  255 (302)
T ss_dssp             CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred             ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence            6543321 22334568889999999999999999999999999999999998853210        00111111111122


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...........     ..    ...+.+++.+||+.||.+|||++||++.|+.+
T Consensus       256 ~~~~~~~~~~~-----~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          256 LKEGKRLPCPP-----NC----PDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             HHTTCCCCCCT-----TC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhccCCCCCCC-----CC----CHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            21211111100     11    13466899999999999999999999999764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.4e-40  Score=349.76  Aligned_cols=262  Identities=19%  Similarity=0.242  Sum_probs=199.8

Q ss_pred             HHHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-----chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC
Q 005236          382 IANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-----SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG  455 (706)
Q Consensus       382 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  455 (706)
                      +....++|++.+.||+|+||.||+|+.. +++.||+|++...     .....+.+.+|+.++++++||||+++++++.+.
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            3455678999999999999999999984 5788999998643     344567899999999999999999999999999


Q ss_pred             CeeEEEEecCCCCChhhhhhcccc-------------------------------------cCCCCHHHHHHHHHHHHHH
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQER-------------------------------------CKLLDWSKRFHIICGTARG  498 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------~~~l~~~~~~~i~~~ia~~  498 (706)
                      +..++||||+++|+|.+++.....                                     ...+++..++.++.||+.|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence            999999999999999999852110                                     1123567788899999999


Q ss_pred             HHHHHhCCCCceEecccCCCcEEEcCCC--CeEEeeeccccccCCCCC--cccccccccccCccCcccccc--CCCCcch
Q 005236          499 LLYLHQDSRLRIIHRDLKASNVLLDQDM--NPKISDFGLARAFGGDET--EGNTNRVVGTYGYMAPEYASD--GQFSVKS  572 (706)
Q Consensus       499 l~~LH~~~~~~ivH~Dikp~Nill~~~~--~~kl~Dfgla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~s~~s  572 (706)
                      |+|||+.+   |+||||||+|||++.++  .+||+|||+++.+.....  ........||+.|+|||++.+  ..++.++
T Consensus       181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  257 (345)
T 3hko_A          181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC  257 (345)
T ss_dssp             HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred             HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence            99999998   99999999999998776  899999999987533211  112334679999999999975  6789999


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC
Q 005236          573 DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC  652 (706)
Q Consensus       573 Dv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt  652 (706)
                      ||||||+++|||++|+.||.....   .....   ..........  .+... ..+    ..+.+++..||+.+|.+||+
T Consensus       258 DiwslG~il~el~~g~~pf~~~~~---~~~~~---~~~~~~~~~~--~~~~~-~~~----~~~~~li~~~l~~~p~~Rps  324 (345)
T 3hko_A          258 DAWSAGVLLHLLLMGAVPFPGVND---ADTIS---QVLNKKLCFE--NPNYN-VLS----PLARDLLSNLLNRNVDERFD  324 (345)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSH---HHHHH---HHHHCCCCTT--SGGGG-GSC----HHHHHHHHHHSCSCTTTSCC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCh---HHHHH---HHHhcccccC--Ccccc-cCC----HHHHHHHHHHcCCChhHCCC
Confidence            999999999999999999754322   11111   1211111110  01100 111    24567899999999999999


Q ss_pred             hhHHHHH
Q 005236          653 MPSVILM  659 (706)
Q Consensus       653 ~~ev~~~  659 (706)
                      +.|+++.
T Consensus       325 ~~~~l~h  331 (345)
T 3hko_A          325 AMRALQH  331 (345)
T ss_dssp             HHHHHHS
T ss_pred             HHHHhcC
Confidence            9999873

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=8.8e-40  Score=337.04  Aligned_cols=255  Identities=24%  Similarity=0.346  Sum_probs=194.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      .++|++.+.||+|+||.||+|+...    +..||+|++... .....+.+.+|+.++++++||||+++++++ ..+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence            3689999999999999999998743    456999998653 445567899999999999999999999997 4567899


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++++|.+++....  ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus        93 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME  167 (281)
T ss_dssp             EEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccC
Confidence            999999999999996432  35889999999999999999999988   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ..... ......+|+.|+|||++....++.++||||||+++|||++ |+.||......+   ......    ......+.
T Consensus       168 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~~i~----~~~~~~~~  239 (281)
T 1mp8_A          168 DSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRIE----NGERLPMP  239 (281)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHH----TTCCCCCC
T ss_pred             ccccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHHHHH----cCCCCCCC
Confidence            33221 2223456789999999999999999999999999999997 899976433222   221111    11111111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                           ...    ...+.+++..||+.||.+|||+.||++.|+.+
T Consensus       240 -----~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          240 -----PNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             -----TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                 111    12456789999999999999999999999864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.4e-39  Score=344.01  Aligned_cols=266  Identities=17%  Similarity=0.221  Sum_probs=200.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeC----CCcEEEEEEcCccchh-----------hHHHHHHHHHHHhhcCCcceeeeEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKISEQ-----------GLKELKNEIILFSKLQHRNLVKLLG  450 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~  450 (706)
                      .++|.+.+.||+|+||.||+|+..    .+..+|||++......           ....+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            368999999999999999999985    5778999998653221           1134667888999999999999999


Q ss_pred             EEEe----CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC
Q 005236          451 CCIH----GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM  526 (706)
Q Consensus       451 ~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~  526 (706)
                      ++..    ....++||||+ +++|.+++....   .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSS
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCC
Confidence            9988    67889999999 999999996543   6899999999999999999999998   99999999999999887


Q ss_pred             --CeEEeeeccccccCCCCCc-----ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005236          527 --NPKISDFGLARAFGGDETE-----GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK  599 (706)
Q Consensus       527 --~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~  599 (706)
                        .+||+|||+++.+......     .......||+.|+|||++.+..++.++||||||+++|||++|+.||....... 
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-  267 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP-  267 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-
T ss_pred             CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-
Confidence              9999999999876432211     11234579999999999999999999999999999999999999985322211 


Q ss_pred             hhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          600 LNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       600 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                       .................+.........    ...+.+++..||+.+|.+||++++|++.|+...
T Consensus       268 -~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          268 -VAVQTAKTNLLDELPQSVLKWAPSGSS----CCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             -HHHHHHHHHHHHTTTHHHHHHSCTTSC----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             -HHHHHHHHhhcccccHHHHhhcccccc----HHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence             112222222222222211110000011    124667889999999999999999999999863

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=8.3e-40  Score=343.04  Aligned_cols=267  Identities=29%  Similarity=0.420  Sum_probs=212.1

Q ss_pred             HHHHHHhccCCCccceeccCCceeEEEEEe------CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEe
Q 005236          379 LATIANATDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLG  450 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~  450 (706)
                      ........++|++.+.||+|+||.||+|+.      .+++.||||++... .....+.+.+|+.++.++ +||||+++++
T Consensus        19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   98 (316)
T 2xir_A           19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   98 (316)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence            344445568999999999999999999984      34678999998753 344567899999999999 7999999999


Q ss_pred             EEEeCC-eeEEEEecCCCCChhhhhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccC
Q 005236          451 CCIHGE-EKLLIYEFMPNKSLDSFIFDQER-------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLK  516 (706)
Q Consensus       451 ~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dik  516 (706)
                      ++...+ ..++||||+++++|.+++.....             ...+++..++.++.||+.||.|||+.+   |+|||||
T Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dik  175 (316)
T 2xir_A           99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLA  175 (316)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCS
T ss_pred             EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCc
Confidence            988755 58999999999999999975432             123788999999999999999999988   9999999


Q ss_pred             CCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCC
Q 005236          517 ASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYH  595 (706)
Q Consensus       517 p~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~  595 (706)
                      |+||+++.++.+||+|||+++.+.............+|+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus       176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~  255 (316)
T 2xir_A          176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  255 (316)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence            9999999999999999999987654433333444668899999999999999999999999999999998 999975433


Q ss_pred             CCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          596 SDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...  .....    ...........     ..+    ..+.+++.+||+.+|.+|||+.||++.|+.+
T Consensus       256 ~~~--~~~~~----~~~~~~~~~~~-----~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          256 IDE--EFCRR----LKEGTRMRAPD-----YTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             CSH--HHHHH----HHHTCCCCCCT-----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhH--HHHHH----hccCccCCCCC-----CCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            221  11111    11111111111     111    2466788999999999999999999999865

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=8.5e-40  Score=345.82  Aligned_cols=263  Identities=31%  Similarity=0.418  Sum_probs=209.9

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEe
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIH  454 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  454 (706)
                      ....++|.+.+.||+|+||.||+|+...      .+.||+|.+... .....+.+.+|+.+++++ +||||+++++++.+
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  121 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH  121 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence            3445789999999999999999999743      247999998754 344567899999999999 89999999999999


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccc-----------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQER-----------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD  523 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~  523 (706)
                      .+..++||||+++|+|.+++.....           ...+++..++.++.||+.||+|||+.+   |+||||||+|||++
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLT  198 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEE
T ss_pred             CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEEC
Confidence            9999999999999999999975432           245789999999999999999999988   99999999999999


Q ss_pred             CCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhH
Q 005236          524 QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNL  602 (706)
Q Consensus       524 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~  602 (706)
                      .++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |..||........  .
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~  276 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--F  276 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--H
T ss_pred             CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--H
Confidence            999999999999987644333333334567889999999999999999999999999999999 8888754332211  1


Q ss_pred             HHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       603 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...    ..........     ...    ...+.+++..||+.+|.+|||++||++.|+..
T Consensus       277 ~~~----~~~~~~~~~~-----~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          277 YKL----VKDGYQMAQP-----AFA----PKNIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             HHH----HHHTCCCCCC-----TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHH----HhcCCCCCCC-----CCC----CHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence            111    1111111000     001    12456789999999999999999999999754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.8e-40  Score=350.25  Aligned_cols=247  Identities=24%  Similarity=0.352  Sum_probs=200.0

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++....   ....+.+.+|+.+++.++||||+++++++......++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            46899999999999999999997 568899999986432   22245789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+ +|+|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++.....
T Consensus        88 ~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~  160 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTD  160 (336)
T ss_dssp             ECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred             EECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence            9999 78898888654   34899999999999999999999998   99999999999999999999999999987543


Q ss_pred             CCCcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ..   ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||...........+       .... .    
T Consensus       161 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i-------~~~~-~----  225 (336)
T 3h4j_B          161 GN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV-------NSCV-Y----  225 (336)
T ss_dssp             SB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC-------CSSC-C----
T ss_pred             Cc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH-------HcCC-C----
Confidence            22   2234579999999999988776 78999999999999999999998643322211100       0000 0    


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       .+....+    ..+.+++.+||+.||.+|||++|+++.
T Consensus       226 -~~p~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          226 -VMPDFLS----PGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             -CCCTTSC----HHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             -CCcccCC----HHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence             0011111    245678999999999999999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.6e-39  Score=351.30  Aligned_cols=206  Identities=20%  Similarity=0.266  Sum_probs=178.3

Q ss_pred             ccCCCccceeccC--CceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          386 TDNFSINKKLGEG--GFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      .++|++.++||+|  +||.||+|+.. +++.||||++...  .....+.+.+|+.++++++|||||++++++.+.+..++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            3689999999999  99999999986 5889999998653  34556788899999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++....
T Consensus       104 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~  179 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMI  179 (389)
T ss_dssp             EEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred             EEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence            999999999999996542 245899999999999999999999998   9999999999999999999999999987542


Q ss_pred             CCCC-----cccccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Q 005236          541 GDET-----EGNTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGKKNRGFYH  595 (706)
Q Consensus       541 ~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG~~p~~~~~  595 (706)
                      ....     ........||+.|+|||++.+  ..++.++|||||||++|||++|+.||....
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  241 (389)
T 3gni_B          180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP  241 (389)
T ss_dssp             ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence            2111     112223478999999999987  679999999999999999999999986543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.1e-39  Score=342.51  Aligned_cols=262  Identities=27%  Similarity=0.363  Sum_probs=204.5

Q ss_pred             cCC-CccceeccCCceeEEEEEe-----CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--Ce
Q 005236          387 DNF-SINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EE  457 (706)
Q Consensus       387 ~~~-~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~  457 (706)
                      ++| ++.++||+|+||.||++..     .+++.||||++... .....+.+.+|+.++++++||||+++++++.+.  ..
T Consensus        30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (318)
T 3lxp_A           30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS  109 (318)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred             HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence            344 8999999999999988864     25788999999764 345567899999999999999999999999884  57


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+++++|.+++...    .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~  182 (318)
T 3lxp_A          110 LQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAK  182 (318)
T ss_dssp             EEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             EEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccc
Confidence            89999999999999999543    3899999999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC--------CchhHHHHHHH
Q 005236          538 AFGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSD--------NKLNLIRHAWK  608 (706)
Q Consensus       538 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~--------~~~~~~~~~~~  608 (706)
                      ........ .......+|..|+|||++.+..++.++||||||+++|||++|+.|+......        ...........
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (318)
T 3lxp_A          183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE  262 (318)
T ss_dssp             ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred             cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence            86543221 1233356788899999999999999999999999999999999997532110        00001111111


Q ss_pred             HhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       609 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      ............     .    ....+.+++.+||+.||.+|||++||++.|+.+.
T Consensus       263 ~~~~~~~~~~~~-----~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  309 (318)
T 3lxp_A          263 LLERGERLPRPD-----K----CPAEVYHLMKNCWETEASFRPTFENLIPILKTVH  309 (318)
T ss_dssp             HHHTTCCCCCCT-----T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhcccCCCCCc-----c----ccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            111111111111     1    1235678899999999999999999999998763

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=7.2e-40  Score=334.83  Aligned_cols=254  Identities=26%  Similarity=0.424  Sum_probs=206.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            57899999999999999999998888999999975432 34678999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +++|.+++....  ..+++..++.++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++....... .
T Consensus        87 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~  160 (267)
T 3t9t_A           87 HGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-T  160 (267)
T ss_dssp             TCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-H
T ss_pred             CCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccc-c
Confidence            999999996532  45889999999999999999999998   99999999999999999999999999987543211 1


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......++..|+|||++.+..++.++||||||+++|||++ |+.||.....   .......    ....... ..    .
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~i----~~~~~~~-~~----~  228 (267)
T 3t9t_A          161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---SEVVEDI----STGFRLY-KP----R  228 (267)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHH----HTTCCCC-CC----T
T ss_pred             ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH---HHHHHHH----hcCCcCC-CC----c
Confidence            2223456788999999999999999999999999999999 8988754221   1111111    1111100 00    0


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..    ...+.+++.+||+.+|.+||+++++++.|+.+
T Consensus       229 ~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (267)
T 3t9t_A          229 LA----STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI  262 (267)
T ss_dssp             TS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cC----cHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            11    12456789999999999999999999999865

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.7e-40  Score=346.10  Aligned_cols=248  Identities=23%  Similarity=0.284  Sum_probs=191.4

Q ss_pred             ccCCCccceeccCCceeEEEEEe----CCCcEEEEEEcCccc----hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSKIS----EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  457 (706)
                      .++|++.+.||+|+||.||+++.    ..++.||+|++.+..    ......+.+|+.++++++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            36899999999999999999987    468899999987532    2345668899999999999999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             EEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccc
Confidence            99999999999999999643   34788999999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ......  .......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ...........  ......
T Consensus       170 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~i~~~--~~~~p~  242 (327)
T 3a62_A          170 ESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN---RKKTIDKILKC--KLNLPP  242 (327)
T ss_dssp             -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHHHHHT--CCCCCT
T ss_pred             ccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC---HHHHHHHHHhC--CCCCCC
Confidence            643221  12234579999999999999999999999999999999999999985422   12222221111  001111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVIL  658 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~  658 (706)
                              ..+    ..+.+++.+||+.||.+||     ++.|+++
T Consensus       243 --------~~~----~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          243 --------YLT----QEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             --------TSC----HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             --------CCC----HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence                    111    2456788999999999999     6677765

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=2.4e-39  Score=334.22  Aligned_cols=252  Identities=23%  Similarity=0.353  Sum_probs=202.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .++|++.+.||+|+||.||+|... +++.||+|++..  ......+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            478999999999999999999985 488999999854  34455678899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC---eEEeeecccccc
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAF  539 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~---~kl~Dfgla~~~  539 (706)
                      ||+++++|.+++...   ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.   +||+|||++...
T Consensus        85 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~  158 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  158 (284)
T ss_dssp             CCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             ecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence            999999999888654   35899999999999999999999998   999999999999987665   999999999876


Q ss_pred             CCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ....   ......||+.|+|||++.+..++.++||||||+++|+|++|+.||....   ............ ...+... 
T Consensus       159 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~---~~~~~~~~~~~~-~~~~~~~-  230 (284)
T 3kk8_A          159 NDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED---QHRLYAQIKAGA-YDYPSPE-  230 (284)
T ss_dssp             CSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHTC-CCCCTTT-
T ss_pred             ccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc---hhHHHHHHHhcc-ccCCchh-
Confidence            4322   2233578999999999999999999999999999999999999975322   111111111110 0001000 


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                         . ...+    ..+.+++..||+.||.+|||++|+++.
T Consensus       231 ---~-~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          231 ---W-DTVT----PEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             ---T-TTSC----HHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             ---h-cccC----HHHHHHHHHHcccChhhCCCHHHHhcC
Confidence               0 0111    245678999999999999999999873

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=5.7e-40  Score=348.78  Aligned_cols=249  Identities=23%  Similarity=0.295  Sum_probs=200.8

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  459 (706)
                      ..++|++.+.||+|+||.||+|+... ++.||||++.+.   .....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            34789999999999999999999865 788999998653   223456788999999988 8999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +||||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+++..
T Consensus        98 lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            999999999999999653   34889999999999999999999998   999999999999999999999999999864


Q ss_pred             CCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||....   .........   .. ... + 
T Consensus       172 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~---~~~~~~~i~---~~-~~~-~-  240 (353)
T 2i0e_A          172 IWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---EDELFQSIM---EH-NVA-Y-  240 (353)
T ss_dssp             CCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHH---HC-CCC-C-
T ss_pred             ccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC---HHHHHHHHH---hC-CCC-C-
Confidence            3221  22334679999999999999999999999999999999999999985422   222221111   11 110 0 


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh-----hHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM-----PSVIL  658 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~-----~ev~~  658 (706)
                          ....+    ..+.+++..||+.||.+||+.     ++|++
T Consensus       241 ----p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          241 ----PKSMS----KEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             ----CTTSC----HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             ----CCCCC----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence                01111    245678999999999999964     66654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.2e-40  Score=346.39  Aligned_cols=257  Identities=26%  Similarity=0.399  Sum_probs=197.9

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-Cc----EEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQ----EIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.++||+|+||.||+|++.. ++    +|++|.+.. ......+.+.+|+.++++++||||+++++++.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            689999999999999999999743 44    357787754 34455678999999999999999999999998654 889


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |+||+++|+|.+++....  ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus        94 v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             EECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             EEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            999999999999996543  45889999999999999999999998   9999999999999999999999999998865


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......   ......    ........
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~~----~~~~~~~~  241 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE----KGERLPQP  241 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHH----TTCCCCCC
T ss_pred             CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHHH----cCCCCCCC
Confidence            4433333334567889999999999999999999999999999999 999986543322   111111    11111100


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                           ...    ...+.+++..||+.||.+||+++||++.|+.+..
T Consensus       242 -----~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          242 -----PIC----TIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             -----TTB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             -----ccC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence                 011    1246678999999999999999999999987643

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=2.6e-39  Score=349.23  Aligned_cols=251  Identities=26%  Similarity=0.356  Sum_probs=196.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcC--CcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQ--HRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||.||++....++.||||++..  ......+.+.+|+.++.+++  ||||+++++++...+..++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            46999999999999999999998899999999854  34556788999999999996  599999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      | +.+++|.+++....   .+++..+..++.||+.||.|||+.+   |+||||||+|||++ ++.+||+|||+++.+...
T Consensus       136 E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~  207 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  207 (390)
T ss_dssp             E-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred             e-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence            9 67889999996543   5788899999999999999999988   99999999999995 589999999999876544


Q ss_pred             CCcccccccccccCccCcccccc-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASD-----------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      ..........||+.|+|||++.+           ..++.++|||||||++|||++|+.||.....     ..........
T Consensus       208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~~~  282 (390)
T 2zmd_A          208 TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIID  282 (390)
T ss_dssp             ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHHHC
T ss_pred             CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHHHHHHhC
Confidence            33333345679999999999865           4689999999999999999999999853221     1111122221


Q ss_pred             cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          612 EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       612 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ......+.     ...    ...+.+++..||+.||.+|||+.||++.
T Consensus       283 ~~~~~~~~-----~~~----~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          283 PNHEIEFP-----DIP----EKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             TTSCCCCC-----CCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccCCCC-----ccc----hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            11111110     011    1245678999999999999999999864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=6.8e-40  Score=368.04  Aligned_cols=258  Identities=27%  Similarity=0.431  Sum_probs=207.6

Q ss_pred             hccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ..++|++.++||+|+||.||+|++.++..||||++.... ...+.|.+|+.++++++||||+++++++.+ +..++||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            346789999999999999999999888899999997543 335789999999999999999999999865 678999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++|+|.++|.... ...+++..++.++.||+.||+|||+++   |+||||||+||||++++.+||+|||+++.+.....
T Consensus       343 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  418 (535)
T 2h8h_A          343 MSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  418 (535)
T ss_dssp             CTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred             hcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence            99999999996432 245889999999999999999999988   99999999999999999999999999987643211


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                       .......++..|+|||++....++.++||||||++||||++ |+.||.....   .+.....    ..+......    
T Consensus       419 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~---~~~~~~i----~~~~~~~~~----  486 (535)
T 2h8h_A          419 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REVLDQV----ERGYRMPCP----  486 (535)
T ss_dssp             -HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH---HHHHHHH----HTTCCCCCC----
T ss_pred             -ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHH----HcCCCCCCC----
Confidence             11222456789999999999999999999999999999999 8988754321   1222211    111111110    


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                       ...    ...+.+|+.+||+.||++|||+++|+++|+.+..
T Consensus       487 -~~~----~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          487 -PEC----PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             -TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             -CCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence             011    1246678999999999999999999999998744

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=8.4e-40  Score=336.37  Aligned_cols=251  Identities=20%  Similarity=0.300  Sum_probs=202.6

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ..++|++.+.||+|+||.||+|+... +..+|+|++........+.+.+|+.++++++||||+++++++.+....++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            34679999999999999999999855 67899999877655667889999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE---cCCCCeEEeeeccccccC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFG  540 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill---~~~~~~kl~Dfgla~~~~  540 (706)
                      |+++++|.+++...   ..+++..++.++.|++.||+|||+.+   |+||||||+|||+   +.++.+||+|||++..+.
T Consensus        87 ~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~  160 (277)
T 3f3z_A           87 LCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK  160 (277)
T ss_dssp             CCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             ccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence            99999999988653   34889999999999999999999998   9999999999999   888999999999998764


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ...   ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||.....   .......    ...... ...
T Consensus       161 ~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~~----~~~~~~-~~~  228 (277)
T 3f3z_A          161 PGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD---SEVMLKI----REGTFT-FPE  228 (277)
T ss_dssp             TTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHH----HHCCCC-CCH
T ss_pred             Ccc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH---HHHHHHH----HhCCCC-CCc
Confidence            332   22335689999999998654 99999999999999999999999754321   1111111    111110 000


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ... ...    ...+.+++..||+.||.+|||+.|+++
T Consensus       229 ~~~-~~~----~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          229 KDW-LNV----SPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHH-TTS----CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             hhh-hcC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000 011    124567899999999999999999975

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=2.4e-39  Score=361.19  Aligned_cols=253  Identities=26%  Similarity=0.338  Sum_probs=205.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.+.   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            467999999999999999999985 5899999998653   223456788999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++.... ...+++..+..++.||+.||+|||+++   |+||||||+||||+.++++||+|||+++.+..
T Consensus       263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            99999999999996543 234899999999999999999999998   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ..   ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.......... ..     
T Consensus       339 ~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~-~p-----  409 (576)
T 2acx_A          339 GQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE-YS-----  409 (576)
T ss_dssp             TC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCC-CC-----
T ss_pred             Cc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccccc-CC-----
Confidence            22   1223579999999999999999999999999999999999999987544333222222221111111 11     


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~  658 (706)
                         ...+    ..+.+++..||+.||.+||     +++||++
T Consensus       410 ---~~~s----~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          410 ---ERFS----PQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             ---TTSC----HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             ---ccCC----HHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence               1111    2456789999999999999     6788764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-39  Score=341.49  Aligned_cols=272  Identities=22%  Similarity=0.301  Sum_probs=201.3

Q ss_pred             HHHHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhh--cCCcceeeeEeEEEeC---
Q 005236          381 TIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSK--LQHRNLVKLLGCCIHG---  455 (706)
Q Consensus       381 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~---  455 (706)
                      ......++|++.++||+|+||.||+|+.. ++.||||++....   ...+..|.+++..  ++||||+++++++...   
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~  106 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGS  106 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence            33445578999999999999999999985 8899999985432   2344455555554  4899999999999987   


Q ss_pred             -CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCceEecccCCCcEEEcCCCCeE
Q 005236          456 -EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS-----RLRIIHRDLKASNVLLDQDMNPK  529 (706)
Q Consensus       456 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dikp~Nill~~~~~~k  529 (706)
                       ...++||||+++|+|.+++...    .+++..++.++.|++.||+|||+..     +.+|+||||||+|||++.++.+|
T Consensus       107 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k  182 (337)
T 3mdy_A          107 WTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC  182 (337)
T ss_dssp             GCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred             CCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence             6789999999999999999543    4889999999999999999999870     11399999999999999999999


Q ss_pred             EeeeccccccCCCCCcc--cccccccccCccCccccccCCCCcc------hhhHHHHHHHHHHHhC----------CCCC
Q 005236          530 ISDFGLARAFGGDETEG--NTNRVVGTYGYMAPEYASDGQFSVK------SDVFSFGILLLEIVSG----------KKNR  591 (706)
Q Consensus       530 l~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~~------sDv~SlGvil~elltG----------~~p~  591 (706)
                      |+|||+++.+.......  ......||+.|+|||++.+...+.+      +||||||+++|||++|          +.|+
T Consensus       183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~  262 (337)
T 3mdy_A          183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY  262 (337)
T ss_dssp             ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred             EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence            99999998764332221  1224579999999999988766665      9999999999999999          5555


Q ss_pred             CCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          592 GFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       592 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      ...........  ..............+...+   ........+.+++.+||+.||.+|||+.||++.|+.+.+
T Consensus       263 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  331 (337)
T 3mdy_A          263 HDLVPSDPSYE--DMREIVCIKKLRPSFPNRW---SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE  331 (337)
T ss_dssp             TTTSCSSCCHH--HHHHHHTTSCCCCCCCGGG---GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhcCCCCchh--hhHHHHhhhccCccccccc---hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence            44332222111  1111111111111111111   111345567889999999999999999999999987643

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=8.8e-40  Score=338.17  Aligned_cols=257  Identities=27%  Similarity=0.421  Sum_probs=209.6

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ..++|++.+.||+|+||.||+|++.. ++.||+|++... ....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            45789999999999999999999865 788999998653 3346788999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++.... ...+++..++.++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||++.......
T Consensus        90 ~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           90 FMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             CCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred             cCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence            999999999996543 345899999999999999999999998   9999999999999999999999999998764332


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      . .......+|+.|+|||.+.+..++.++||||||+++|+|++ |..||......   ...............       
T Consensus       166 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~~~~~~~~~~~~~~-------  234 (288)
T 3kfa_A          166 Y-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYELLEKDYRMERP-------  234 (288)
T ss_dssp             S-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHHHHTTCCCCCC-------
T ss_pred             c-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHhccCCCCCC-------
Confidence            2 22233567889999999999999999999999999999999 88887543322   222111111111111       


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                        ...    ...+.+++..||+.||.+|||++||++.|+..
T Consensus       235 --~~~----~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          235 --EGC----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             --TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCC----CHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence              011    12466789999999999999999999999764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=3.6e-39  Score=334.83  Aligned_cols=262  Identities=19%  Similarity=0.271  Sum_probs=204.0

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEE-EeCCeeEEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCC-IHGEEKLLIY  462 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~  462 (706)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++.....  .+.+.+|+.+++.++|++++..+..+ .+.+..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            457899999999999999999997 5688999998644322  24578899999999988877766655 6677889999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE---cCCCCeEEeeecccccc
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAF  539 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill---~~~~~~kl~Dfgla~~~  539 (706)
                      ||+ +++|.+++....  ..+++..++.++.||+.||.|||+.+   |+||||||+|||+   ++++.+||+|||+++..
T Consensus        85 e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             ECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             Ecc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            999 999999996432  35899999999999999999999998   9999999999999   78999999999999876


Q ss_pred             CCCCCc-----ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          540 GGDETE-----GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       540 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      ......     .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......................
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence            543321     122346789999999999999999999999999999999999999976555444444333322211111


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...+.     ...+    ..+.+++..||+.+|++|||+++|++.|+.+
T Consensus       239 ~~~~~-----~~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          239 IEVLC-----KGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHHT-----TTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             hhhhh-----ccCC----HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            11110     1111    2466789999999999999999999999875

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.4e-39  Score=340.73  Aligned_cols=266  Identities=24%  Similarity=0.303  Sum_probs=197.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .++|++.++||+|+||.||+|+... ++.||||++...  .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            3689999999999999999999854 889999988553  3344567889999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++...   ..+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||+++.....
T Consensus        82 e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  155 (311)
T 4agu_A           82 EYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGP  155 (311)
T ss_dssp             ECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence            999999999988543   34889999999999999999999998   999999999999999999999999999876432


Q ss_pred             CCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHH--------HhhcC
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK--------LWNEG  613 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~--------~~~~~  613 (706)
                      ..  ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+....+.....        .+...
T Consensus       156 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (311)
T 4agu_A          156 SD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN  233 (311)
T ss_dssp             ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred             cc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc
Confidence            21  2233578999999999976 6789999999999999999999999865433222221111100        00000


Q ss_pred             C-CcccccccccCcCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 M-PSQLIDACFKDSFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 ~-~~~~~d~~~~~~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      . .....-+........     .....+.+++..||+.||.+|||++|+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0 000000000000000     011246689999999999999999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=1.9e-39  Score=340.01  Aligned_cols=260  Identities=25%  Similarity=0.408  Sum_probs=196.4

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC----CcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe-
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE-  457 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-  457 (706)
                      ..++|.+.+.||+|+||.||+|+...    ++.||||++...  .....+.+.+|+.++++++||||+++++++.+... 
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            45789999999999999999998742    457999998643  44556789999999999999999999999987653 


Q ss_pred             ----eEEEEecCCCCChhhhhhcc---cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          458 ----KLLIYEFMPNKSLDSFIFDQ---ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       458 ----~~lV~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                          .++||||+++++|.+++...   .....+++..++.++.||++||.|||+.+   |+||||||+|||++.++.+||
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl  188 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCV  188 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEE
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEE
Confidence                49999999999999998543   23356899999999999999999999988   999999999999999999999


Q ss_pred             eeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHH
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKL  609 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~  609 (706)
                      +|||+++.+.............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......   .......  
T Consensus       189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~~--  263 (313)
T 3brb_A          189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---EMYDYLL--  263 (313)
T ss_dssp             CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHHHH--
T ss_pred             eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---HHHHHHH--
Confidence            99999987654333233334567889999999999999999999999999999999 88887543322   2222211  


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                        .........     ..    ...+.+++.+||+.+|.+|||+++|++.|+.+
T Consensus       264 --~~~~~~~~~-----~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l  306 (313)
T 3brb_A          264 --HGHRLKQPE-----DC----LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL  306 (313)
T ss_dssp             --TTCCCCCBT-----TC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --cCCCCCCCc-----cc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence              111111111     11    12466789999999999999999999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.6e-39  Score=350.38  Aligned_cols=272  Identities=20%  Similarity=0.269  Sum_probs=212.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC--eeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE--EKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV  461 (706)
                      .++|.+.++||+|+||.||+|++.. ++.||||++.... ....+.+.+|+.++++++||||+++++++....  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            3679999999999999999999864 8899999987533 344677889999999999999999999998765  67999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE----cCCCCeEEeeecccc
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL----DQDMNPKISDFGLAR  537 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill----~~~~~~kl~Dfgla~  537 (706)
                      |||+++|+|.+++........+++..++.++.||+.||+|||+.+   |+||||||+|||+    +.++.+||+|||+++
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            999999999999977655555899999999999999999999998   9999999999999    788889999999998


Q ss_pred             ccCCCCCcccccccccccCccCcccccc--------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC-chhHHHHHHH
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASD--------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN-KLNLIRHAWK  608 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~-~~~~~~~~~~  608 (706)
                      ......   ......||+.|+|||++..        ..++.++||||||+++|||++|+.||....... ..........
T Consensus       165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~  241 (396)
T 4eut_A          165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (396)
T ss_dssp             ECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred             EccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence            764322   2223568999999999865        567889999999999999999999986544322 2222222221


Q ss_pred             HhhcCCCcccc---------ccc--ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          609 LWNEGMPSQLI---------DAC--FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       609 ~~~~~~~~~~~---------d~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .........+.         ...  ............+.+++..||+.||++||++.|+++.|+.+
T Consensus       242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i  307 (396)
T 4eut_A          242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (396)
T ss_dssp             SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence            11111110000         000  01122344555677899999999999999999999888765

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=6.1e-39  Score=335.85  Aligned_cols=245  Identities=23%  Similarity=0.310  Sum_probs=192.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||+||+|++. +++.||||++...  .......+..|+..+.++ +||||+++++++.+++..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            57999999999999999999986 6899999998642  333444555666666555 8999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+ +++|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.....
T Consensus       137 e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~  210 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA  210 (311)
T ss_dssp             ECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred             ecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence            999 679998886543  45899999999999999999999988   999999999999999999999999999876432


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .   ......||+.|+|||++.+ .++.++||||||+++|||++|..++...      .    .+..+.......    .
T Consensus       211 ~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~------~----~~~~~~~~~~~~----~  272 (311)
T 3p1a_A          211 G---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG------E----GWQQLRQGYLPP----E  272 (311)
T ss_dssp             -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH------H----HHHHHTTTCCCH----H
T ss_pred             C---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc------c----HHHHHhccCCCc----c
Confidence            2   2233568999999999876 7999999999999999999997764321      1    111111111111    1


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      +....    ...+.+++.+||+.||++|||++|+++.
T Consensus       273 ~~~~~----~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          273 FTAGL----SSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             HHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccCC----CHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            11111    1346678999999999999999999863

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=6.1e-39  Score=357.18  Aligned_cols=251  Identities=26%  Similarity=0.372  Sum_probs=202.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|.+.+.||+|+||.||+++.. +++.||||++.+..   ....+.+.+|+.++++++||||+++++++.+....++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            368999999999999999999985 58999999986532   23456788999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          462 YEFMPNKSLDSFIFDQER-CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |||+++|+|.+++..... ...+++..++.++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+++.+.
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            999999999999975432 346899999999999999999999998   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+..  ..... .. .+  
T Consensus       341 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~--~i~~~-~~-~~--  412 (543)
T 3c4z_A          341 AGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ--RVLEQ-AV-TY--  412 (543)
T ss_dssp             TTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH--HHHHC-CC-CC--
T ss_pred             CCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH--HHhhc-cc-CC--
Confidence            3322  22335799999999999999999999999999999999999999865433222221111  11111 11 00  


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChh
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMP  654 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~  654 (706)
                         ....+    ..+.+++..||+.||.+||++.
T Consensus       413 ---p~~~s----~~~~~li~~lL~~dP~~R~~~~  439 (543)
T 3c4z_A          413 ---PDKFS----PASKDFCEALLQKDPEKRLGFR  439 (543)
T ss_dssp             ---CTTSC----HHHHHHHHHHSCSSGGGSCCCB
T ss_pred             ---CcccC----HHHHHHHHHhccCCHhHCCCCc
Confidence               01111    2456788999999999999763

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=4.6e-39  Score=337.49  Aligned_cols=262  Identities=22%  Similarity=0.264  Sum_probs=198.4

Q ss_pred             ccCCCcc-ceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSIN-KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .+.|.+. +.||+|+||.||+|+.. +++.||||++........+.+.+|+.++.++ +||||+++++++.+.+..++||
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            3578874 78999999999999974 6889999999766555677899999999885 7999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC---eEEeeecccccc
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDFGLARAF  539 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~---~kl~Dfgla~~~  539 (706)
                      ||+++++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.   +||+|||+++..
T Consensus        91 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A           91 EKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             ECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             EcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            999999999999654   35889999999999999999999998   999999999999998876   999999999865


Q ss_pred             CCCCC-----cccccccccccCccCcccccc-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchh--------
Q 005236          540 GGDET-----EGNTNRVVGTYGYMAPEYASD-----GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLN--------  601 (706)
Q Consensus       540 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~--------  601 (706)
                      .....     ........||+.|+|||++..     ..++.++||||||+++|||++|+.||......+...        
T Consensus       165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  244 (316)
T 2ac3_A          165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA  244 (316)
T ss_dssp             -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred             ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence            32211     111223469999999999975     568899999999999999999999986543322100        


Q ss_pred             HHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ........+...... +..... ...    ...+.+++.+||+.||.+|||++|+++.
T Consensus       245 ~~~~~~~~i~~~~~~-~~~~~~-~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          245 CQNMLFESIQEGKYE-FPDKDW-AHI----SCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHHHHCCCC-CCHHHH-TTS----CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHHhccCcc-cCchhc-ccC----CHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            001111111111110 000000 011    1246689999999999999999999984

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=339.68  Aligned_cols=264  Identities=22%  Similarity=0.304  Sum_probs=197.5

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc-----hhhHHHHHHHHHHHhhc---CCcceeeeEeEEEeC
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS-----EQGLKELKNEIILFSKL---QHRNLVKLLGCCIHG  455 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~  455 (706)
                      ..++|++.++||+|+||.||+|+. .+++.||||++....     ......+.+|+.+++++   +||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357999999999999999999997 458899999986422     11134566777776666   499999999999876


Q ss_pred             C-----eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          456 E-----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       456 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                      .     ..++||||++ ++|.+++..... ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEE
Confidence            5     4799999997 599999865432 34899999999999999999999998   999999999999999999999


Q ss_pred             eeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      +|||+++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ...........
T Consensus       162 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~  235 (308)
T 3g33_A          162 ADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE---ADQLGKIFDLI  235 (308)
T ss_dssp             CSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH---HHHHHHHHHHH
T ss_pred             eeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHh
Confidence            9999998754222   23346789999999999999999999999999999999999999854332   22222222222


Q ss_pred             hcCCCcccc------ccccc--CcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          611 NEGMPSQLI------DACFK--DSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       611 ~~~~~~~~~------d~~~~--~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .........      ...+.  ......     ....+.+++.+||+.||.+|||+.|+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            111110000      00000  000011     11356789999999999999999999863

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.6e-39  Score=334.40  Aligned_cols=256  Identities=25%  Similarity=0.335  Sum_probs=201.8

Q ss_pred             CCCccceeccCCceeEEEEEeCC----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee-EEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK-LLI  461 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lV  461 (706)
                      .|.+.++||+|+||.||+|+..+    +..+|+|++... .....+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            45667999999999999998633    236999998753 445567899999999999999999999999877665 999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+.+++|.+++...  ...+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus       102 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  176 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILD  176 (298)
T ss_dssp             ECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred             EecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence            9999999999999653  345789999999999999999999998   99999999999999999999999999987643


Q ss_pred             CCC--cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          542 DET--EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       542 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ...  ........+|+.|+|||.+.+..++.++||||||+++|||++|..|+..  ................... ..  
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~--~~~~~~~~~~~~~~~~~~~-~~--  251 (298)
T 3pls_A          177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR--HIDPFDLTHFLAQGRRLPQ-PE--  251 (298)
T ss_dssp             GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTT--TSCGGGHHHHHHTTCCCCC-CT--
T ss_pred             CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCc--cCCHHHHHHHhhcCCCCCC-Cc--
Confidence            321  1223345688999999999999999999999999999999996666422  1122222222111110000 00  


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                            ..    ...+.+++.+||+.+|.+|||++++++.|+.+
T Consensus       252 ------~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          252 ------YC----PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             ------TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------cc----hHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                  11    12466789999999999999999999999876

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.3e-39  Score=341.78  Aligned_cols=263  Identities=22%  Similarity=0.296  Sum_probs=204.6

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe----CCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH----GEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l  460 (706)
                      .++|++.+.||+|+||.||+++. .+++.||||++........+.+.+|+.++++++||||+++++++..    ....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            46899999999999999999998 5688999999877667777889999999999999999999999873    347799


Q ss_pred             EEecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          461 IYEFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      ||||+++++|.+++.... ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++...
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            999999999999996532 2356899999999999999999999998   999999999999999999999999998764


Q ss_pred             CCCCCcc-------cccccccccCccCccccccCC---CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHH
Q 005236          540 GGDETEG-------NTNRVVGTYGYMAPEYASDGQ---FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL  609 (706)
Q Consensus       540 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  609 (706)
                      .......       ......||+.|+|||++....   ++.++||||||+++|||++|+.||......... .....   
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~---  260 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-VALAV---  260 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-HHHHH---
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-hhHHh---
Confidence            3211110       112345799999999987654   789999999999999999999997532111111 11110   


Q ss_pred             hhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       610 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                       ........     ....    ...+.+++.+||+.||.+|||+++|++.|+.+..
T Consensus       261 -~~~~~~~~-----~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          261 -QNQLSIPQ-----SPRH----SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             -HCC--CCC-----CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             -hccCCCCc-----cccC----CHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence             11000000     0011    1246678999999999999999999999997643

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=4e-39  Score=342.65  Aligned_cols=252  Identities=24%  Similarity=0.331  Sum_probs=187.6

Q ss_pred             hccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ..++|++.+.||+|+||.||+|+... ++.||||++....  ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            34689999999999999999999864 7889999986533  34678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC---CCCeEEeeeccccccC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---DMNPKISDFGLARAFG  540 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl~Dfgla~~~~  540 (706)
                      |+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||+++...
T Consensus       129 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          129 LVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             CCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             eCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            99999999999643   34889999999999999999999988   999999999999975   8999999999998753


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ...   ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  ......   .. ..... ...
T Consensus       203 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~~---i~-~~~~~-~~~  272 (349)
T 2w4o_A          203 HQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD--QFMFRR---IL-NCEYY-FIS  272 (349)
T ss_dssp             -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH--HHHHHH---HH-TTCCC-CCT
T ss_pred             ccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc--HHHHHH---HH-hCCCc-cCC
Confidence            321   223457899999999999999999999999999999999999997532221  111111   11 11110 111


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      +.. ...+    ..+.+++.+||+.||++|||+.|+++.
T Consensus       273 ~~~-~~~~----~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          273 PWW-DEVS----LNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             TTT-TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             chh-hhCC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            111 1111    245678999999999999999999873

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.3e-39  Score=335.49  Aligned_cols=247  Identities=25%  Similarity=0.356  Sum_probs=198.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||.||+|+... ++.||||++....   ....+.+.+|+.++++++||||+++++++.+....++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            4689999999999999999998854 6789999985432   22356789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.....
T Consensus        88 ~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~  161 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS  161 (279)
T ss_dssp             ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred             EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence            9999999999999654   34889999999999999999999987   99999999999999999999999999865432


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      .    ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....   ......... . .......   
T Consensus       162 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~-~-~~~~~~~---  229 (279)
T 3fdn_A          162 S----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY---QETYKRISR-V-EFTFPDF---  229 (279)
T ss_dssp             ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHHH-T-CCCCCTT---
T ss_pred             c----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH---HHHHHHHHh-C-CCCCCCc---
Confidence            2    22335789999999999999999999999999999999999999753221   111111111 0 1111111   


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                           .    ...+.+++..||+.+|.+|||++||++.
T Consensus       230 -----~----~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          230 -----V----TEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             -----S----CHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             -----C----CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                 1    1245678899999999999999999974

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=2.9e-39  Score=340.29  Aligned_cols=251  Identities=24%  Similarity=0.264  Sum_probs=179.2

Q ss_pred             cceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEecCCCCC
Q 005236          392 NKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYEFMPNKS  469 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gs  469 (706)
                      .+.||+|+||.||+++.. +++.||||++...   ....+.+|+.++.++. ||||+++++++.+....++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            378999999999999985 5889999998543   3467788999999997 9999999999999999999999999999


Q ss_pred             hhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC---CeEEeeeccccccCCCCCcc
Q 005236          470 LDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM---NPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       470 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~---~~kl~Dfgla~~~~~~~~~~  546 (706)
                      |.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++   .+||+|||+++.......  
T Consensus        93 L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--  164 (325)
T 3kn6_A           93 LFERIKKK---KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--  164 (325)
T ss_dssp             HHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred             HHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--
Confidence            99999654   45899999999999999999999988   99999999999998766   899999999987543221  


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                      ......||+.|+|||++.+..++.++||||||+++|||++|+.||..................+..+... +....+. .
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~-~  242 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS-FEGEAWK-N  242 (325)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC-CCSHHHH-T
T ss_pred             cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC-CCccccc-C
Confidence            2234568999999999999999999999999999999999999986543322211122222222222211 0000000 0


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .    ...+.+++..||+.||.+|||++|+++.
T Consensus       243 ~----s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          243 V----SQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             S----CHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             C----CHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            1    1246689999999999999999998743

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=8.6e-39  Score=332.03  Aligned_cols=261  Identities=19%  Similarity=0.272  Sum_probs=206.4

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEE-EeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCC-IHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~e  463 (706)
                      .++|++.+.||+|+||.||+|+. .+++.||||++.....  .+.+.+|+.+++.++|++++..+..+ .+....++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            47899999999999999999997 5688999998754332  24688999999999998876666555 56778899999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE---cCCCCeEEeeeccccccC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFG  540 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill---~~~~~~kl~Dfgla~~~~  540 (706)
                      |+ +++|.+++....  ..+++..++.++.||+.||+|||+++   |+||||||+|||+   +.++.+||+|||+++...
T Consensus        86 ~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             CC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             ec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            99 999999996432  35899999999999999999999998   9999999999999   488999999999998765


Q ss_pred             CCCCcc-----cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          541 GDETEG-----NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       541 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      ......     ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........................
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  239 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence            433211     123467999999999999999999999999999999999999999765544433333332221111111


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..+.     ...+    ..+.+++.+||+.||.+|||+++|++.|+.+
T Consensus       240 ~~~~-----~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          240 EVLC-----KGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HHHT-----TTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             HHHH-----hhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence            1110     1111    2466789999999999999999999999876

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=2.2e-39  Score=339.01  Aligned_cols=262  Identities=25%  Similarity=0.380  Sum_probs=198.8

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc---cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||.||+|.. .+++.||||++..   ......+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            46799999999999999999997 4688999999864   2345567889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          462 YEFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |||+++++|.+++.... ....+++..++.++.||+.||.|||+.+   ++||||||+||+++.++.+||+|||+++...
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            99999999999996532 2355889999999999999999999998   9999999999999999999999999998754


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ....  ......|++.|+|||++.+..++.++||||||+++|||++|+.||..... .......    ............
T Consensus       188 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~----~~~~~~~~~~~~  260 (310)
T 2wqm_A          188 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCK----KIEQCDYPPLPS  260 (310)
T ss_dssp             -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-CHHHHHH----HHHTTCSCCCCT
T ss_pred             CCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-hHHHHHH----HhhcccCCCCcc
Confidence            3221  22235689999999999999999999999999999999999999753221 1111111    111111111111


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                          ...+    ..+.+++.+||+.||.+|||+.+|++.|+.+.+
T Consensus       261 ----~~~~----~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          261 ----DHYS----EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             ----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----cccC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence                1111    245678999999999999999999999988733

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.4e-40  Score=344.87  Aligned_cols=261  Identities=22%  Similarity=0.337  Sum_probs=194.0

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhh-HHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.++||+|+||.||+|+.. +++.||||++....... ...+.+|+.++++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57999999999999999999985 68899999986533221 22456799999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      ++ ++|.+++....  ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++...... 
T Consensus        82 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-  154 (324)
T 3mtl_A           82 LD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-  154 (324)
T ss_dssp             CS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred             cc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc-
Confidence            98 58988886532  45889999999999999999999998   9999999999999999999999999998653221 


Q ss_pred             cccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC---Cccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM---PSQLID  620 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d  620 (706)
                       .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......   ..............   ......
T Consensus       155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~  230 (324)
T 3mtl_A          155 -KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE---EQLHFIFRILGTPTEETWPGILS  230 (324)
T ss_dssp             ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             -cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCChHhchhhhc
Confidence             12233568999999999876 57899999999999999999999998653322   22222222221111   111110


Q ss_pred             cc-c-----c--CcCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          621 AC-F-----K--DSFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       621 ~~-~-----~--~~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .. .     .  .....     .....+.+++.+||+.||.+|||++|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            00 0     0  00000     01124568999999999999999999987

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.5e-39  Score=351.41  Aligned_cols=264  Identities=24%  Similarity=0.373  Sum_probs=192.9

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCC--ee
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGE--EK  458 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~  458 (706)
                      ..++|++.++||+|+||.||+|.+. +++.||||++..  ......+.+.+|+.++.++. ||||+++++++...+  ..
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            4578999999999999999999974 588999999864  34455677889999999997 999999999998654  68


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||++ ++|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.
T Consensus        87 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~  158 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRS  158 (388)
T ss_dssp             EEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence            99999998 589988854    35889999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCCC-------------------cccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 005236          539 FGGDET-------------------EGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN  598 (706)
Q Consensus       539 ~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~  598 (706)
                      +.....                   .......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....  
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~--  236 (388)
T 3oz6_A          159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST--  236 (388)
T ss_dssp             SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--
T ss_pred             ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH--
Confidence            632110                   111233579999999999986 6799999999999999999999999864332  


Q ss_pred             chhHHHHHHHHhhcCCCccc-----------cc----------ccccCcCC------------HHHHHHHHHHHHHhcCC
Q 005236          599 KLNLIRHAWKLWNEGMPSQL-----------ID----------ACFKDSFN------------LAEVIRCIHIGLLCVQQ  645 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~-----------~d----------~~~~~~~~------------~~~~~~~~~l~~~cl~~  645 (706)
                       .............+....+           +.          ......+.            ......+.+++.+||+.
T Consensus       237 -~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~  315 (388)
T 3oz6_A          237 -MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF  315 (388)
T ss_dssp             -HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred             -HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence             2222222221111110000           00          00000000            00112467899999999


Q ss_pred             CCCCCCChhHHHHH
Q 005236          646 YPEDRPCMPSVILM  659 (706)
Q Consensus       646 ~p~~RPt~~ev~~~  659 (706)
                      ||.+|||++|+++.
T Consensus       316 dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          316 NPNKRISANDALKH  329 (388)
T ss_dssp             SGGGSCCHHHHTTS
T ss_pred             CcccCCCHHHHhCC
Confidence            99999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-39  Score=345.78  Aligned_cols=254  Identities=23%  Similarity=0.307  Sum_probs=201.3

Q ss_pred             cCCCccceeccCCceeEEEEEe----CCCcEEEEEEcCccc----hhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSKIS----EQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  457 (706)
                      ++|++.++||+|+||.||+++.    ..++.||||++....    ....+.+.+|+.++.++ +||||+++++++.....
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            6899999999999999999997    368899999986532    23345677899999999 69999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             EEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            99999999999999999654   34889999999999999999999988   9999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      .+..... .......||+.|+|||++.+  ..++.++||||||+++|||++|+.||...........+..  ........
T Consensus       208 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~--~~~~~~~~  284 (355)
T 1vzo_A          208 EFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR--RILKSEPP  284 (355)
T ss_dssp             ECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH--HHHHCCCC
T ss_pred             ecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH--HHhccCCC
Confidence            7533222 12234579999999999986  3578999999999999999999999875443333222222  11111110


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHHHh
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVILML  660 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~~L  660 (706)
                        +     .....    ..+.+++.+||+.||.+||     +++|+++..
T Consensus       285 --~-----~~~~~----~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          285 --Y-----PQEMS----ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             --C-----CTTSC----HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             --C-----CcccC----HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence              0     01111    2456789999999999999     899998755

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=6.9e-39  Score=329.22  Aligned_cols=253  Identities=27%  Similarity=0.402  Sum_probs=203.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            367999999999999999999985 5889999998643 33446788999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++...   ..+++..++.++.||+.||+|||+.+   ++|+||||+||+++.++.+||+|||++..+....
T Consensus        86 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  159 (276)
T 2yex_A           86 YCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  159 (276)
T ss_dssp             CCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             ecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence            99999999998543   35889999999999999999999988   9999999999999999999999999998764332


Q ss_pred             CcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .........|++.|+|||.+.+..+ +.++||||||+++|||++|+.||........  ....    +......  ... 
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~----~~~~~~~--~~~-  230 (276)
T 2yex_A          160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSD----WKEKKTY--LNP-  230 (276)
T ss_dssp             EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--HHHH----HHTTCTT--STT-
T ss_pred             chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--HHHH----hhhcccc--cCc-
Confidence            2223344678999999999988765 7899999999999999999999865433221  1111    1111110  000 


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      . ...+    ..+.+++..||+.||.+|||++|+++
T Consensus       231 ~-~~~~----~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          231 W-KKID----SAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             G-GGSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             h-hhcC----HHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            0 0111    24567899999999999999999976

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=3.6e-39  Score=335.38  Aligned_cols=256  Identities=27%  Similarity=0.395  Sum_probs=199.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCC----CcEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe-CCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH-GEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~l  460 (706)
                      .+|++.++||+|+||.||+|+..+    ...+|+|.+.. ......+.+.+|+.++++++||||+++++++.+ ++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            568889999999999999998743    23589999875 344556789999999999999999999998654 557899


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++++|.+++...  ...+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       105 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMY  179 (298)
T ss_dssp             EEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred             EEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccccc
Confidence            99999999999999643  345789999999999999999999998   9999999999999999999999999998764


Q ss_pred             CCCCc--ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCC-CCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          541 GDETE--GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK-KNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       541 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      .....  .......+|+.|+|||.+.+..++.++||||||+++|||++|. +|+......   ........    .....
T Consensus       180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~~~~~~~----~~~~~  252 (298)
T 3f66_A          180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVYLLQ----GRRLL  252 (298)
T ss_dssp             CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT---THHHHHHT----TCCCC
T ss_pred             ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH---HHHHHHhc----CCCCC
Confidence            33221  1223356788999999999999999999999999999999954 454332222   22211111    11100


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      . .    ...+    ..+.+++..||+.+|.+|||++|+++.|+.+
T Consensus       253 ~-~----~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  289 (298)
T 3f66_A          253 Q-P----EYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAI  289 (298)
T ss_dssp             C-C----TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C-C----ccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            0 0    0111    2466789999999999999999999999876

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=5.9e-40  Score=347.28  Aligned_cols=257  Identities=24%  Similarity=0.288  Sum_probs=189.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEe--------C
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIH--------G  455 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--------~  455 (706)
                      ..+|++.++||+|+||.||+|+.. +++.||||++........+.+.+|+.++.++. ||||+++++++..        .
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            358999999999999999999974 68899999987766677788999999999996 9999999999953        3


Q ss_pred             CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecc
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGL  535 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgl  535 (706)
                      ...++||||++ |+|.+++........+++..++.++.||+.||.|||+.+ .+|+||||||+||||+.++.+||+|||+
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcc
Confidence            35789999996 799999876555566999999999999999999999864 3499999999999999999999999999


Q ss_pred             ccccCCCCCcc----------cccccccccCccCcccc---ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhH
Q 005236          536 ARAFGGDETEG----------NTNRVVGTYGYMAPEYA---SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL  602 (706)
Q Consensus       536 a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~  602 (706)
                      ++.........          ......||+.|+|||++   .+..++.++||||||+++|||++|+.||.......   .
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---~  261 (337)
T 3ll6_A          185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR---I  261 (337)
T ss_dssp             CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH---h
Confidence            98764332211          11134689999999998   56678999999999999999999999975322111   0


Q ss_pred             HHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       603 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .   ....... ...        ..    ...+.+++..||+.||.+|||+.|+++.|+.+
T Consensus       262 ~---~~~~~~~-~~~--------~~----~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~  306 (337)
T 3ll6_A          262 V---NGKYSIP-PHD--------TQ----YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI  306 (337)
T ss_dssp             -------CCCC-TTC--------CS----SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             h---cCcccCC-ccc--------cc----chHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            0   0000000 000        00    01245688899999999999999999999876

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=3.6e-39  Score=341.26  Aligned_cols=248  Identities=26%  Similarity=0.345  Sum_probs=203.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|.+.+.||+|+||.||+++..+ ++.+|+|++...   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            4689999999999999999999854 778999998643   345567889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus       120 ~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  193 (335)
T 2owb_A          120 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  193 (335)
T ss_dssp             ECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence            9999999999988543   35889999999999999999999998   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ...  ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .........  .......    
T Consensus       194 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~~~~--~~~~~~~----  262 (335)
T 2owb_A          194 DGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL---KETYLRIKK--NEYSIPK----  262 (335)
T ss_dssp             TTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHHH--TCCCCCT----
T ss_pred             Ccc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH---HHHHHHHhc--CCCCCCc----
Confidence            221  22335789999999999999999999999999999999999999854321   111111110  0111111    


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                          ..+    ..+.+++.+||+.||.+|||++|+++
T Consensus       263 ----~~~----~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          263 ----HIN----PVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             ----TSC----HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ----cCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence                111    23567889999999999999999986

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=3.8e-39  Score=329.99  Aligned_cols=253  Identities=23%  Similarity=0.352  Sum_probs=202.9

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC--CeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG--EEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||+|++. ++.||||++...  .....+.+.+|+.++++++||||+++++++.+.  ...++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            67999999999999999999985 788999998653  445567899999999999999999999999877  7889999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ ..++||||||+||+++.++.++|.|||++..... 
T Consensus        89 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-  165 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-  165 (271)
T ss_dssp             ECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred             cccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence            9999999999996543 235899999999999999999999864 3499999999999999999999999998764321 


Q ss_pred             CCcccccccccccCccCccccccCCCCc---chhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSV---KSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~---~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                            ....||+.|+|||.+.+..++.   ++||||||+++|||++|+.||.....   ...   ............+.
T Consensus       166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~---~~~~~~~~~~~~~~  233 (271)
T 3kmu_A          166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN---MEI---GMKVALEGLRPTIP  233 (271)
T ss_dssp             ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH---HHH---HHHHHHSCCCCCCC
T ss_pred             ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh---HHH---HHHHHhcCCCCCCC
Confidence                  2246899999999998765544   89999999999999999999854321   111   11122222211111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      .     ..+    ..+.+++..||+.||.+|||++|+++.|+.+.
T Consensus       234 ~-----~~~----~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          234 P-----GIS----PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             T-----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             C-----CCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            1     111    24667889999999999999999999998653

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=4.9e-39  Score=331.72  Aligned_cols=249  Identities=26%  Similarity=0.418  Sum_probs=203.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe----------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH----------  454 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------  454 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++....    +.+.+|+.++++++||||+++++++..          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            457999999999999999999985 68999999986543    356789999999999999999998864          


Q ss_pred             ------CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          455 ------GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       455 ------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                            ....++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+   |+||||||+|||+++++.+
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~  161 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQV  161 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEE
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCE
Confidence                  345799999999999999996543 346899999999999999999999988   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK  608 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  608 (706)
                      ||+|||+++......   ......||+.|+|||++.+..++.++||||||+++|||++|..|+..         ......
T Consensus       162 kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~---------~~~~~~  229 (284)
T 2a19_B          162 KIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE---------TSKFFT  229 (284)
T ss_dssp             EECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH---------HHHHHH
T ss_pred             EECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh---------HHHHHH
Confidence            999999998764432   22235689999999999999999999999999999999999987421         111111


Q ss_pred             HhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCCC
Q 005236          609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVL  666 (706)
Q Consensus       609 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~~  666 (706)
                      ..........        .+    ..+.+++.+||+.||.+|||+.|+++.|......
T Consensus       230 ~~~~~~~~~~--------~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          230 DLRDGIISDI--------FD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HHHTTCCCTT--------SC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             Hhhccccccc--------CC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            2222222211        12    1355788999999999999999999999876443

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.5e-39  Score=338.93  Aligned_cols=257  Identities=28%  Similarity=0.432  Sum_probs=199.3

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.+.||+|+||.||+|+...     +..||||++... .......+.+|+.++++++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            578888999999999999998743     235999998753 44456688999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++...
T Consensus       124 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          124 ITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE  198 (333)
T ss_dssp             EEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence            99999999999999653  245899999999999999999999998   9999999999999999999999999998764


Q ss_pred             CCCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          541 GDETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       541 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ...... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....   ......    ...+.....
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~---~~~~~~----~~~~~~~~~  271 (333)
T 1mqb_A          199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN---HEVMKA----INDGFRLPT  271 (333)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHH----HHTTCCCCC
T ss_pred             cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH---HHHHHH----HHCCCcCCC
Confidence            332211 2223456788999999999999999999999999999999 9999754321   111111    111111110


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      ..     .    ....+.+++.+||+.+|.+||++.+|++.|+.+.
T Consensus       272 ~~-----~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          272 PM-----D----CPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  308 (333)
T ss_dssp             CT-----T----CBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cc-----c----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            00     1    1124667899999999999999999999998763

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.5e-39  Score=331.14  Aligned_cols=255  Identities=27%  Similarity=0.413  Sum_probs=205.2

Q ss_pred             cCCCccc-eeccCCceeEEEEEeC---CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINK-KLGEGGFGPVYKGTLA---DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|.+.+ .||+|+||.||+|+..   .++.||||++... .....+.+.+|+.++++++||||+++++++ +.+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            4666666 9999999999999863   5778999999763 445677899999999999999999999999 56678999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...  ...+++..++.++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||+++....
T Consensus        88 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             EECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            9999999999999543  345899999999999999999999998   99999999999999999999999999988754


Q ss_pred             CCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          542 DETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       542 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      .... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....   ......    ........+.
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~~~~~----i~~~~~~~~~  235 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG---PEVMAF----IEQGKRMECP  235 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT---HHHHHH----HHTTCCCCCC
T ss_pred             CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH---HHHHHH----HhcCCcCCCC
Confidence            3322 12233456889999999998899999999999999999999 9999854332   111111    1111111111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                           ...    ...+.+++..||+.+|.+||++.+|++.|+.+
T Consensus       236 -----~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          236 -----PEC----PPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             -----TTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCc----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                 111    12466789999999999999999999999865

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.5e-39  Score=335.32  Aligned_cols=255  Identities=25%  Similarity=0.377  Sum_probs=201.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      .++|++.+.||+|+||.||+|+..+    +..||||.+... .....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence            4689999999999999999998643    346999998764 44556789999999999999999999999764 56789


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++++|.+++....  ..+++..++.++.||+.||.|||+.+   |+||||||+||+++.++.+||+|||+++...
T Consensus        90 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  164 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIE  164 (281)
T ss_dssp             EEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred             EEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence            999999999999996532  45889999999999999999999988   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ..... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   .......    .......
T Consensus       165 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~~~~~----~~~~~~~  236 (281)
T 3cc6_A          165 DEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIGVLEK----GDRLPKP  236 (281)
T ss_dssp             ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHHHHHH----TCCCCCC
T ss_pred             ccccc-ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHHHHhc----CCCCCCC
Confidence            33221 2223456889999999999999999999999999999998 999986433322   2211111    1110000


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                           ...+    ..+.+++.+||+.+|.+|||+.|+++.|+.+
T Consensus       237 -----~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          237 -----DLCP----PVLYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             -----TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCCC----HHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence                 0111    2466789999999999999999999999865

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.1e-38  Score=345.40  Aligned_cols=253  Identities=19%  Similarity=0.245  Sum_probs=190.2

Q ss_pred             ccCCCcc-ceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHh-hcCCcceeeeEeEEEe----CCee
Q 005236          386 TDNFSIN-KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFS-KLQHRNLVKLLGCCIH----GEEK  458 (706)
Q Consensus       386 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~  458 (706)
                      .++|.+. +.||+|+||.||+++.. +++.||||++...     ..+.+|+.++. ..+||||+++++++..    ....
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            3567776 78999999999999985 5889999998532     35677888774 4589999999999876    5678


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC---CCCeEEeeecc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---DMNPKISDFGL  535 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl~Dfgl  535 (706)
                      ++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||+
T Consensus       135 ~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccc
Confidence            99999999999999996543 245899999999999999999999988   999999999999998   78999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      ++......   ......||+.|+|||++.+..++.++|||||||++|||++|+.||.................   .+..
T Consensus       211 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~---~~~~  284 (400)
T 1nxk_A          211 AKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---MGQY  284 (400)
T ss_dssp             CEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---HTCC
T ss_pred             ccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---cCcc
Confidence            98754221   22346789999999999999999999999999999999999999865443322111111111   1110


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       .+..+.+ ...+    ..+.+++..||+.||.+|||+.||++.
T Consensus       285 -~~~~~~~-~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          285 -EFPNPEW-SEVS----EEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             -CCCTTTT-TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -cCCCccc-ccCC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence             0000000 0111    246678999999999999999999975

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.4e-39  Score=356.45  Aligned_cols=247  Identities=25%  Similarity=0.390  Sum_probs=202.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|.+.+.||+|+||.||+|+.. +|+.||||++....   ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            368999999999999999999985 68999999986532   23356789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++....
T Consensus        95 ~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~  168 (476)
T 2y94_A           95 MEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  168 (476)
T ss_dssp             EECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred             EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence            9999999999999643   45899999999999999999999988   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ..   ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....   .......    ..+... .  
T Consensus       169 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---~~~~~~i----~~~~~~-~--  235 (476)
T 2y94_A          169 GE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV---PTLFKKI----CDGIFY-T--  235 (476)
T ss_dssp             TC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS---HHHHHHH----HTTCCC-C--
T ss_pred             cc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH---HHHHHHH----hcCCcC-C--
Confidence            22   2234579999999999988776 6899999999999999999999854322   2222211    111110 0  


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                         ....+    ..+.+++..||+.||.+|||++|+++
T Consensus       236 ---p~~~s----~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          236 ---PQYLN----PSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             ---CTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---CccCC----HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence               00111    24567899999999999999999987

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=2.3e-39  Score=341.51  Aligned_cols=261  Identities=22%  Similarity=0.317  Sum_probs=203.0

Q ss_pred             HHHHHHhccCCCcc-ceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcC-CcceeeeEeEEE
Q 005236          379 LATIANATDNFSIN-KKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQ-HRNLVKLLGCCI  453 (706)
Q Consensus       379 ~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~  453 (706)
                      +.......+.|.+. ++||+|+||.||+|+.. +++.||||++...  .......+.+|+.++.++. ||||+++++++.
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~   99 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE   99 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence            34445556778887 89999999999999985 5889999998653  2334678899999999995 699999999999


Q ss_pred             eCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC---CCCeEE
Q 005236          454 HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---DMNPKI  530 (706)
Q Consensus       454 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl  530 (706)
                      +....++||||+++|+|.+++... ....+++..++.++.||+.||+|||+.+   |+||||||+|||++.   ++.+||
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL  175 (327)
T 3lm5_A          100 NTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKI  175 (327)
T ss_dssp             CSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEE
T ss_pred             eCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEE
Confidence            999999999999999999998543 2356899999999999999999999998   999999999999998   789999


Q ss_pred             eeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      +|||+++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .......... 
T Consensus       176 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~~~-  248 (327)
T 3lm5_A          176 VDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN---QETYLNISQV-  248 (327)
T ss_dssp             CCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHT-
T ss_pred             eeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hHHHHHHHhc-
Confidence            9999998764322   22335789999999999999999999999999999999999999754222   1111111111 


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..........     ..    ...+.+++.+||+.||.+|||++|+++.
T Consensus       249 ~~~~~~~~~~-----~~----~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          249 NVDYSEETFS-----SV----SQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             CCCCCTTTTT-----TS----CHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             ccccCchhhc-----cc----CHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            1111111111     11    1245678999999999999999999864

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=2.1e-39  Score=340.91  Aligned_cols=252  Identities=22%  Similarity=0.287  Sum_probs=203.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch------hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE------QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.....      ...+.+.+|+.++++++||||+++++++.+....
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            367999999999999999999985 588999999865322      1367899999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC----CeEEeeec
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM----NPKISDFG  534 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~----~~kl~Dfg  534 (706)
                      ++||||+++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++    .+||+|||
T Consensus        91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg  164 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred             EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCc
Confidence            9999999999999999643   34789999999999999999999998   99999999999999888    79999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      +++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||....   ........    ....
T Consensus       165 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~~~~~~i----~~~~  234 (321)
T 2a2a_A          165 LAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANI----TSVS  234 (321)
T ss_dssp             TCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS---HHHHHHHH----HTTC
T ss_pred             cceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC---HHHHHHHH----Hhcc
Confidence            998764322   2233568999999999999999999999999999999999999975322   11111111    1111


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      . . .++......+    ..+.+++.+||+.||.+|||++|+++.
T Consensus       235 ~-~-~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          235 Y-D-FDEEFFSHTS----ELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             C-C-CCHHHHTTCC----HHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             c-c-cChhhhcccC----HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            1 0 0100111111    245678999999999999999999873

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=5.9e-40  Score=361.10  Aligned_cols=248  Identities=21%  Similarity=0.259  Sum_probs=192.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.++||+|+||.||+|+.. +++.||||++...   .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            467999999999999999999974 5889999998653   334456778899999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      |||+++|+|.+++...   ..+++..+..++.||+.||+|||+ .+   |+||||||+||||+.++.+||+|||+++...
T Consensus       227 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          227 MEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             ECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             EeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            9999999999998653   358999999999999999999998 77   9999999999999999999999999998643


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ...  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   .........  .....+.   
T Consensus       301 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~~i~~--~~~~~p~---  370 (446)
T 4ejn_A          301 KDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELILM--EEIRFPR---  370 (446)
T ss_dssp             C-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHH--CCCCCCT---
T ss_pred             CCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---HHHHHHHHh--CCCCCCc---
Confidence            222  223346799999999999999999999999999999999999999854221   111111111  1111111   


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVIL  658 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~  658 (706)
                           ..+    ..+.+++..||+.||.+||     +++|+++
T Consensus       371 -----~~~----~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          371 -----TLG----PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             -----TSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -----cCC----HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                 111    2456789999999999999     9999986

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=8.4e-40  Score=349.97  Aligned_cols=247  Identities=23%  Similarity=0.274  Sum_probs=190.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccc---hhhHHHHHHHHHH-HhhcCCcceeeeEeEEEeCCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKIS---EQGLKELKNEIIL-FSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      .++|++.+.||+|+||.||+++.+. ++.||||++.+..   ....+.+..|..+ ++.++||||+++++++.+.+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            4689999999999999999999854 7889999986532   2334556677776 577899999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++|+|.+++...   ..+++..+..++.||+.||+|||+++   |+||||||+||||+.++++||+|||+++...
T Consensus       117 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~  190 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENI  190 (373)
T ss_dssp             EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred             EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence            99999999999999653   34788899999999999999999988   9999999999999999999999999998643


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ...  ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....   ........   ... .. .+  
T Consensus       191 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~---~~~~~~~i---~~~-~~-~~--  258 (373)
T 2r5t_A          191 EHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN---TAEMYDNI---LNK-PL-QL--  258 (373)
T ss_dssp             CCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB---HHHHHHHH---HHS-CC-CC--
T ss_pred             cCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC---HHHHHHHH---Hhc-cc-CC--
Confidence            221  22344679999999999999999999999999999999999999985322   11221111   111 11 00  


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                         ....+    ..+.+++..||+.||.+||++.+.+
T Consensus       259 ---~~~~~----~~~~~li~~lL~~dp~~R~~~~~~~  288 (373)
T 2r5t_A          259 ---KPNIT----NSARHLLEGLLQKDRTKRLGAKDDF  288 (373)
T ss_dssp             ---CSSSC----HHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred             ---CCCCC----HHHHHHHHHHcccCHHhCCCCCCCH
Confidence               01111    2456788999999999999986433

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=4.6e-39  Score=339.28  Aligned_cols=259  Identities=29%  Similarity=0.436  Sum_probs=202.9

Q ss_pred             ccCCCccceeccCCceeEEEEEe------CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      .++|++.+.||+|+||.||+|+.      .+++.||||++... .......+.+|+.++++++||||+++++++.+....
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            36899999999999999999984      34678999999653 455567889999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC---CCCeEEe
Q 005236          459 LLIYEFMPNKSLDSFIFDQER----CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---DMNPKIS  531 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl~  531 (706)
                      ++||||+++++|.+++.....    ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.   +..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence            999999999999999976432    245889999999999999999999998   999999999999994   4569999


Q ss_pred             eeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHh
Q 005236          532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      |||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....   ......    .
T Consensus       186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~~~~~----~  258 (327)
T 2yfx_A          186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN---QEVLEF----V  258 (327)
T ss_dssp             CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---HHHHHH----H
T ss_pred             ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH---HHHHHH----H
Confidence            9999986543333333334567899999999999999999999999999999998 8888753221   111111    1


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .........     ...+    ..+.+++..||+.||.+||++.+|++.|+..
T Consensus       259 ~~~~~~~~~-----~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          259 TSGGRMDPP-----KNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HTTCCCCCC-----TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcCCCCCCC-----CCCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            111111110     1111    2456789999999999999999999999865

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=9.4e-39  Score=334.12  Aligned_cols=262  Identities=19%  Similarity=0.261  Sum_probs=198.3

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      ...++|++.+.||+|+||.||+|+.. +++.||||++...   .....+.+.+|+.++++++||||+++++++...+..+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence            34578999999999999999999985 5889999998653   2334578999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +||||+++++|.+++...   ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++...
T Consensus       111 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~  184 (309)
T 2h34_A          111 VDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASAT  184 (309)
T ss_dssp             EEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred             EEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence            999999999999999653   35889999999999999999999998   999999999999999999999999999875


Q ss_pred             CCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC-ccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP-SQL  618 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  618 (706)
                      ..... .......|++.|+|||++.+..++.++||||||+++|||++|+.||.....    ..   .......... ...
T Consensus       185 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~---~~~~~~~~~~~~~~  256 (309)
T 2h34_A          185 TDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL----SV---MGAHINQAIPRPST  256 (309)
T ss_dssp             -------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH----HH---HHHHHHSCCCCGGG
T ss_pred             ccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH----HH---HHHHhccCCCCccc
Confidence            43221 122335689999999999999999999999999999999999999753221    11   1111111111 111


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCC-ChhHHHHHhcCCCCCC
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-CMPSVILMLGSEIVLP  667 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-t~~ev~~~L~~~~~~~  667 (706)
                      ..    ...+    ..+.+++.+||+.||.+|| +++++++.|+......
T Consensus       257 ~~----~~~~----~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~  298 (309)
T 2h34_A          257 VR----PGIP----VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA  298 (309)
T ss_dssp             TS----TTCC----THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred             cC----CCCC----HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence            11    1111    1455788999999999999 9999999999774433

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.8e-39  Score=339.78  Aligned_cols=264  Identities=27%  Similarity=0.417  Sum_probs=207.1

Q ss_pred             ccCCCccceeccCCceeEEEEEe-----CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC--ee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-----ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE--EK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~  458 (706)
                      .++|++.+.||+|+||.||+++.     .+++.||||++........+.+.+|+.++++++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            35789999999999999999984     458899999998776677788999999999999999999999987654  78


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++++|.+++....  ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhh
Confidence            99999999999999996542  35889999999999999999999988   99999999999999999999999999988


Q ss_pred             cCCCCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--------CCCc-hhHHHHHHH
Q 005236          539 FGGDETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYH--------SDNK-LNLIRHAWK  608 (706)
Q Consensus       539 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~--------~~~~-~~~~~~~~~  608 (706)
                      ....... .......++..|+|||.+.+..++.++||||||+++|||++|+.|+....        .... .........
T Consensus       195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (326)
T 2w1i_A          195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  274 (326)
T ss_dssp             CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence            6543221 11223457788999999999899999999999999999999998864211        0000 011111111


Q ss_pred             HhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       609 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...........     ...    ...+.+++.+||+.||.+|||+.||++.|+.+
T Consensus       275 ~~~~~~~~~~~-----~~~----~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          275 LLKNNGRLPRP-----DGC----PDEIYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             HHHTTCCCCCC-----TTC----CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhhcCCCCCCC-----Ccc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            22111111111     111    13466799999999999999999999999864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-39  Score=349.32  Aligned_cols=256  Identities=27%  Similarity=0.424  Sum_probs=192.1

Q ss_pred             CCCccceeccCCceeEEEEEeCC----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEe-CCeeEEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIH-GEEKLLI  461 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV  461 (706)
                      .|.+.++||+|+||.||+|++.+    +..||||.+... .....+.+.+|+.++++++||||+++++++.+ .+..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            46778999999999999998732    236899998653 34556789999999999999999999998765 4578999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++...  ...+++..++.++.||++||+|||+.+   |+||||||+||||++++.+||+|||+++.+..
T Consensus       170 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             EECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccccc
Confidence            9999999999999643  245788999999999999999999998   99999999999999999999999999987643


Q ss_pred             CCCcc--cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          542 DETEG--NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       542 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      .....  ......+|+.|+|||++.+..++.++||||||+++|||++ |.+||......+   ......    .+.....
T Consensus       245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~~~----~~~~~~~  317 (373)
T 3c1x_A          245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLL----QGRRLLQ  317 (373)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHHHH----TTCCCCC
T ss_pred             cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHHHH----cCCCCCC
Confidence            32211  2233457889999999999999999999999999999999 666665433322   211111    1111000


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                       .    ...+    ..+.+++.+||+.+|.+|||++||++.|+.+.
T Consensus       318 -p----~~~~----~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          318 -P----EYCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             -C----TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -C----CCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence             0    0111    24667889999999999999999999998763

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=6.7e-39  Score=343.43  Aligned_cols=253  Identities=16%  Similarity=0.145  Sum_probs=202.1

Q ss_pred             HhccCCCccceeccCCceeEEEEE------eCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC---CcceeeeEeEEEe
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGT------LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ---HRNLVKLLGCCIH  454 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~  454 (706)
                      ...++|.+.++||+|+||.||+|+      ...++.||||++....   ..++..|+.++.+++   |+||+++++++..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345789999999999999999994      3558899999997643   346777888887776   9999999999999


Q ss_pred             CCeeEEEEecCCCCChhhhhhccc--ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC--------
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQE--RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ--------  524 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~--------  524 (706)
                      .+..++||||+++|+|.+++....  ....+++..++.++.||+.||+|||+.+   |+||||||+||||+.        
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~  215 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDE  215 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC---
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccc
Confidence            999999999999999999997532  2356999999999999999999999988   999999999999998        


Q ss_pred             ---CCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005236          525 ---DMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLN  601 (706)
Q Consensus       525 ---~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~  601 (706)
                         ++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.......   
T Consensus       216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---  292 (365)
T 3e7e_A          216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE---  292 (365)
T ss_dssp             ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---
T ss_pred             ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---
Confidence               89999999999976543322333344679999999999999999999999999999999999999974322110   


Q ss_pred             HHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCC-CChhHHHHHhcCC
Q 005236          602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDR-PCMPSVILMLGSE  663 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R-Pt~~ev~~~L~~~  663 (706)
                                     ..+...+......+   .+.+++..|++.+|.+| |+++++.+.|+..
T Consensus       293 ---------------~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~  337 (365)
T 3e7e_A          293 ---------------CKPEGLFRRLPHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV  337 (365)
T ss_dssp             ---------------EEECSCCTTCSSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred             ---------------eeechhccccCcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence                           00111111112222   33467789999999988 6788888888764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=4.9e-39  Score=354.43  Aligned_cols=259  Identities=24%  Similarity=0.285  Sum_probs=195.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC------C
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG------E  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~  456 (706)
                      .++|++.++||+|+||.||+|+.. .++.||||++...  .....+.+.+|+.+++.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            478999999999999999999874 5889999998653  445567889999999999999999999999754      3


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      ..++||||++++ |.+.+.     ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       141 ~~~lv~E~~~~~-l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a  211 (464)
T 3ttj_A          141 DVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  211 (464)
T ss_dssp             EEEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred             eEEEEEeCCCCC-HHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEee
Confidence            569999999865 555552     23889999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC-
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP-  615 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-  615 (706)
                      +.....   .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ................ 
T Consensus       212 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~---~~~~~~i~~~lg~p~~~  285 (464)
T 3ttj_A          212 RTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY---IDQWNKVIEQLGTPCPE  285 (464)
T ss_dssp             -----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHHHCSCCHH
T ss_pred             eecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhcCCCCHH
Confidence            876432   223346799999999999999999999999999999999999999854332   2222222111111000 


Q ss_pred             ------------------------cccccccccCcCC---HHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 ------------------------SQLIDACFKDSFN---LAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ------------------------~~~~d~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                                              ...+...+.....   ......+.+|+.+||+.||.+|||++|+++.
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                                    0000000000000   0113457889999999999999999999874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=6.4e-39  Score=331.35  Aligned_cols=252  Identities=24%  Similarity=0.345  Sum_probs=196.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|.+.++||+|+||.||+++.. +++.+|+|++.... ....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            367999999999999999999984 58899999986532 3346789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE---cCCCCeEEeeecccccc
Q 005236          464 FMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAF  539 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill---~~~~~~kl~Dfgla~~~  539 (706)
                      |+++++|.+++.... ....+++..++.++.||+.||+|||+.+   |+||||||+|||+   +.++.+||+|||+++.+
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            999999999986532 3356899999999999999999999988   9999999999999   45688999999999875


Q ss_pred             CCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ....   ......||+.|+|||.+. ..++.++||||||+++|||++|+.||.....   ...... .. ..........
T Consensus       178 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~---~~~~~~-~~-~~~~~~~~~~  248 (285)
T 3is5_A          178 KSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL---EEVQQK-AT-YKEPNYAVEC  248 (285)
T ss_dssp             ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHH-HH-HCCCCCCC--
T ss_pred             CCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH---HHHHhh-hc-cCCccccccc
Confidence            4322   223456899999999885 5789999999999999999999999754321   111111 11 1111111000


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                           ...    ...+.+++.+||+.||.+|||++||++
T Consensus       249 -----~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          249 -----RPL----TPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             -----CCC----CHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             -----CcC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                 001    124567899999999999999999985

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.5e-39  Score=334.79  Aligned_cols=250  Identities=26%  Similarity=0.458  Sum_probs=182.2

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence            346899999999999999999998 468899999986432   2235778999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++++|.+++...  ...+++..++.++.||+.||+|||+.+   ++||||||+||+++.++.+||+|||++....
T Consensus        89 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A           89 VLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             EEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence            99999999999999643  245899999999999999999999998   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ....  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..........      ..    .....  
T Consensus       164 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~----~~~~~--  229 (278)
T 3cok_A          164 MPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN------KV----VLADY--  229 (278)
T ss_dssp             ------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------C----CSSCC--
T ss_pred             CCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH------HH----hhccc--
Confidence            2221  2223568999999999999999999999999999999999999986533221110      00    00000  


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ......+    ..+.+++.+||+.||.+|||+++|++
T Consensus       230 -~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          230 -EMPSFLS----IEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             -CCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -CCccccC----HHHHHHHHHHcccCHhhCCCHHHHhc
Confidence             0111111    24567899999999999999999886

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=4.4e-39  Score=335.78  Aligned_cols=250  Identities=22%  Similarity=0.319  Sum_probs=199.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|.+.+.||+|+||.||+++.. +++.||+|++........+.+.+|+.++++++||||+++++++.+....++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            467999999999999999999985 6889999999765554556789999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE---cCCCCeEEeeeccccccCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill---~~~~~~kl~Dfgla~~~~~  541 (706)
                      +++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+||++   ++++.+||+|||+++....
T Consensus        88 ~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           88 VSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             CCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             CCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            9999999998653   34889999999999999999999988   9999999999999   7889999999999976432


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      .    ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .......    ..+... ...+
T Consensus       162 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~i----~~~~~~-~~~~  229 (304)
T 2jam_A          162 G----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE---SKLFEKI----KEGYYE-FESP  229 (304)
T ss_dssp             B----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHHH----HHCCCC-CCTT
T ss_pred             C----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHH----HcCCCC-CCcc
Confidence            1    22335689999999999999999999999999999999999999754221   1221111    111110 0000


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      . ....+    ..+.+++.+||+.||.+|||++|+++
T Consensus       230 ~-~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          230 F-WDDIS----ESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             T-TTTSC----HHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             c-cccCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0 01111    24667899999999999999999986

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=4.8e-39  Score=340.42  Aligned_cols=266  Identities=27%  Similarity=0.383  Sum_probs=194.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHH--HhhcCCcceeeeEeEEEe-----CCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIIL--FSKLQHRNLVKLLGCCIH-----GEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~~  458 (706)
                      .++|++.++||+|+||.||+|+. +++.||||++.....   ..+..|.++  +..++||||+++++.+..     ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            47899999999999999999987 678999999864332   334444444  556899999999986653     2256


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC---------CCCceEecccCCCcEEEcCCCCeE
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD---------SRLRIIHRDLKASNVLLDQDMNPK  529 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------~~~~ivH~Dikp~Nill~~~~~~k  529 (706)
                      ++||||+++|+|.+++....    .++..++.++.||++||+|||+.         +   |+||||||+||||+.++.+|
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~k  160 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCV  160 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEE
T ss_pred             EEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEE
Confidence            89999999999999995433    48889999999999999999988         6   99999999999999999999


Q ss_pred             EeeeccccccCCCCC------cccccccccccCccCcccccc-------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCC
Q 005236          530 ISDFGLARAFGGDET------EGNTNRVVGTYGYMAPEYASD-------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHS  596 (706)
Q Consensus       530 l~Dfgla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~s~~sDv~SlGvil~elltG~~p~~~~~~  596 (706)
                      |+|||+++.+.....      ........||+.|+|||++.+       ..++.++||||||+++|||++|..|+.....
T Consensus       161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~  240 (336)
T 3g2f_A          161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES  240 (336)
T ss_dssp             ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred             EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence            999999987643321      112223569999999999976       4567899999999999999999877533222


Q ss_pred             CCch-hH----------HHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          597 DNKL-NL----------IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       597 ~~~~-~~----------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      .... ..          ...............-+...+..  .......+.+++.+||+.||++|||++||++.|+.+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKE--NSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCC--CSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccccc--ccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            1111 00          00111111111111111111111  1123446778999999999999999999999998764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=9.6e-39  Score=363.87  Aligned_cols=254  Identities=26%  Similarity=0.397  Sum_probs=199.0

Q ss_pred             CCCccc-eeccCCceeEEEEEeC---CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          388 NFSINK-KLGEGGFGPVYKGTLA---DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       388 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++.+.+ +||+|+||.||+|.+.   ++..||||+++.. .....+.+.+|+.++++++|||||++++++.. +..++||
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~  414 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM  414 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence            444444 8999999999999874   4567999999764 33457889999999999999999999999976 5689999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+||||++++.+||+|||+++.+...
T Consensus       415 E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          415 EMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             ECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred             EeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence            999999999999643  345899999999999999999999988   999999999999999999999999999876433


Q ss_pred             CCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          543 ETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       543 ~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      .... ......+|+.|+|||++....++.++|||||||+||||++ |+.||......   +....    +..+.......
T Consensus       490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~~~----i~~~~~~~~p~  562 (613)
T 2ozo_A          490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAF----IEQGKRMECPP  562 (613)
T ss_dssp             ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---HHHHH----HHTTCCCCCCT
T ss_pred             CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHHH----HHcCCCCCCCC
Confidence            2211 1222346789999999999999999999999999999998 99998654322   22211    11221111111


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                           ..    ...+.+++..||+.+|.+||++.+|++.|+..
T Consensus       563 -----~~----~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          563 -----EC----PPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             -----TC----CHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             -----cC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence                 11    13566789999999999999999999999865

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=9.3e-39  Score=341.97  Aligned_cols=258  Identities=21%  Similarity=0.336  Sum_probs=204.3

Q ss_pred             HHHHHHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--------hhhHHHHHHHHHHHhhc-CCcceeee
Q 005236          379 LATIANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--------EQGLKELKNEIILFSKL-QHRNLVKL  448 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l  448 (706)
                      ........++|.+.+.||+|+||.||+|++. +|+.||||++....        ....+.+.+|+.++.++ +||||+++
T Consensus        86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  165 (365)
T 2y7j_A           86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL  165 (365)
T ss_dssp             HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            3444555678999999999999999999985 68999999885432        12245688999999999 79999999


Q ss_pred             EeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          449 LGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       449 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      ++++......++||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+
T Consensus       166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~i  239 (365)
T 2y7j_A          166 IDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQI  239 (365)
T ss_dssp             EEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCE
T ss_pred             EEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCE
Confidence            99999999999999999999999999643   35899999999999999999999988   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCcccccc------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL  602 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~  602 (706)
                      ||+|||++..+....   ......||+.|+|||++.+      ..++.++||||||+++|||++|+.||....   ....
T Consensus       240 kl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~---~~~~  313 (365)
T 2y7j_A          240 RLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR---QILM  313 (365)
T ss_dssp             EECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS---HHHH
T ss_pred             EEEecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC---HHHH
Confidence            999999998764332   2234679999999999863      368899999999999999999999975322   1111


Q ss_pred             HHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       603 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ....    ...... ...+.+. ..    ...+.+++.+||+.||.+|||+.|+++
T Consensus       314 ~~~i----~~~~~~-~~~~~~~-~~----~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          314 LRMI----MEGQYQ-FSSPEWD-DR----SSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHHH----HHTCCC-CCHHHHS-SS----CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHH----HhCCCC-CCCcccc-cC----CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1111    111110 0000010 11    124667899999999999999999987

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=3.1e-39  Score=341.20  Aligned_cols=261  Identities=25%  Similarity=0.355  Sum_probs=197.7

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.+.||+|+||.||+|+... ++.||||++...  .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            689999999999999999999854 889999988543  33445678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+....
T Consensus       105 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  178 (331)
T 4aaa_A          105 FVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  178 (331)
T ss_dssp             CCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             cCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence            99999999887543   34899999999999999999999998   9999999999999999999999999998754322


Q ss_pred             CcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc----------
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE----------  612 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~----------  612 (706)
                      .  ......||+.|+|||++.+. .++.++||||||+++|||++|+.||......+   ...........          
T Consensus       179 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  253 (331)
T 4aaa_A          179 E--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID---QLYHIMMCLGNLIPRHQELFN  253 (331)
T ss_dssp             -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCHHHHHHHH
T ss_pred             c--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCCCChhhhhHhh
Confidence            1  22335689999999999875 78999999999999999999999975433221   11111111000          


Q ss_pred             -C-CCcccccccccCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          613 -G-MPSQLIDACFKDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       613 -~-~~~~~~d~~~~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       . .......+.+.......     ....+.+++.+||+.||.+|||++|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence             0 00000000111111111     1235678999999999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.4e-38  Score=337.73  Aligned_cols=269  Identities=22%  Similarity=0.283  Sum_probs=207.4

Q ss_pred             HHHHHHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhh--cCCcceeeeEeEEEeCC
Q 005236          379 LATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSK--LQHRNLVKLLGCCIHGE  456 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~  456 (706)
                      ........++|++.+.||+|+||.||+|+. .++.||||++...   ..+.+.+|++++..  ++||||+++++++....
T Consensus        34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN  109 (342)
T ss_dssp             HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred             eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence            333445567899999999999999999998 5889999998643   34567788888877  78999999999998876


Q ss_pred             ----eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCceEecccCCCcEEEcC
Q 005236          457 ----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH--------QDSRLRIIHRDLKASNVLLDQ  524 (706)
Q Consensus       457 ----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dikp~Nill~~  524 (706)
                          ..++||||+++|+|.+++...    .+++..++.++.||+.||+|||        +.+   |+||||||+||||+.
T Consensus       110 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~  182 (342)
T 1b6c_B          110 GTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKK  182 (342)
T ss_dssp             SSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECT
T ss_pred             CccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECC
Confidence                789999999999999999543    4889999999999999999999        666   999999999999999


Q ss_pred             CCCeEEeeeccccccCCCCCcc--cccccccccCccCccccccC------CCCcchhhHHHHHHHHHHHhC---------
Q 005236          525 DMNPKISDFGLARAFGGDETEG--NTNRVVGTYGYMAPEYASDG------QFSVKSDVFSFGILLLEIVSG---------  587 (706)
Q Consensus       525 ~~~~kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~s~~sDv~SlGvil~elltG---------  587 (706)
                      ++.+||+|||+++.........  ......||+.|+|||++.+.      .++.++||||||+++|||++|         
T Consensus       183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~  262 (342)
T 1b6c_B          183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED  262 (342)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred             CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence            9999999999998764432211  22345799999999999775      334789999999999999999         


Q ss_pred             -CCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          588 -KKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       588 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       +.||.........  ................+...   .........+.+++.+||+.||.+|||++||++.|+.+
T Consensus       263 ~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          263 YQLPYYDLVPSDPS--VEEMRKVVCEQKLRPNIPNR---WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             CCCTTTTTSCSSCC--HHHHHHHHTTSCCCCCCCGG---GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccCccccCcCccc--HHHHHHHHHHHHhCCCCccc---ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence             6666543322211  11111222122111111111   12234556778899999999999999999999999875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.2e-38  Score=330.37  Aligned_cols=254  Identities=28%  Similarity=0.398  Sum_probs=201.0

Q ss_pred             cCCCccc-eeccCCceeEEEEEe---CCCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINK-KLGEGGFGPVYKGTL---ADEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|.+.+ .||+|+||.||+|.+   ..++.||||++....  ....+.+.+|+.++++++||||+++++++ +.+..++
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l   94 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML   94 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence            5788887 999999999999965   236789999986532  33467899999999999999999999999 6678899


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+++++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||+++...
T Consensus        95 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  168 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR  168 (291)
T ss_dssp             EEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence            99999999999999653   34889999999999999999999998   9999999999999999999999999998764


Q ss_pred             CCCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          541 GDETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       541 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....   ....    ...........
T Consensus       169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~----~~~~~~~~~~~  241 (291)
T 1xbb_A          169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG---SEVT----AMLEKGERMGC  241 (291)
T ss_dssp             TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHH----HHHHTTCCCCC
T ss_pred             cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHH----HHHHcCCCCCC
Confidence            433221 1222456789999999999899999999999999999999 9999754322   1111    11111111111


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .     ...    ...+.+++..||+.||.+||++.+|++.|+..
T Consensus       242 ~-----~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          242 P-----AGC----PREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             C-----TTC----CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             C-----CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            1     111    12466789999999999999999999999865

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2.8e-39  Score=341.18  Aligned_cols=264  Identities=23%  Similarity=0.302  Sum_probs=192.9

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      ....++|++.++||+|+||.||+|+.. +++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            445578999999999999999999874 68899999986533  233567789999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-----CCCCeEEeeec
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-----QDMNPKISDFG  534 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-----~~~~~kl~Dfg  534 (706)
                      +||||+++ +|.+++....   .+++..+..++.||+.||+|||+.+   |+||||||+|||++     +++.+||+|||
T Consensus       110 lv~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg  182 (329)
T 3gbz_A          110 LIFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFG  182 (329)
T ss_dssp             EEEECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred             EEEecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCC
Confidence            99999985 9999986543   4889999999999999999999998   99999999999994     55569999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      +++.+....  .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.....   ..............
T Consensus       183 ~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~~~~~~~~~  257 (329)
T 3gbz_A          183 LARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE---IDQLFKIFEVLGLP  257 (329)
T ss_dssp             HHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHHHCCC
T ss_pred             CccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH---HHHHHHHHHHhCCC
Confidence            998764322  122335689999999999874 589999999999999999999999754322   22222222211111


Q ss_pred             C---Cccccc-cccc------CcCCHH------HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          614 M---PSQLID-ACFK------DSFNLA------EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       614 ~---~~~~~d-~~~~------~~~~~~------~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .   ...... +.+.      ......      ....+.+++.+||+.||.+|||++|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            1   000000 0000      000111      1135678999999999999999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=4.6e-39  Score=331.90  Aligned_cols=250  Identities=20%  Similarity=0.302  Sum_probs=199.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch------hhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE------QGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      ++|++.+.||+|+||.||+++.. +++.||+|.+.....      ...+.+.+|+.++++++||||+++++++.+....+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            57999999999999999999986 588999999864321      23678999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC----CeEEeeecc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM----NPKISDFGL  535 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~----~~kl~Dfgl  535 (706)
                      +||||+++++|.+++...   ..+++..++.++.||+.||.|||+.+   ++||||||+||+++.++    .+||+|||+
T Consensus        85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~  158 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI  158 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence            999999999999999643   35899999999999999999999988   99999999999999887    899999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      +.......   ......|++.|+|||++.+..++.++||||||+++|||++|+.||.....   ......    +.....
T Consensus       159 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~----~~~~~~  228 (283)
T 3bhy_A          159 AHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK---QETLTN----ISAVNY  228 (283)
T ss_dssp             CEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHH----HHTTCC
T ss_pred             ceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch---HHHHHH----hHhccc
Confidence            98764322   12335689999999999999999999999999999999999999754221   111111    111111


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      . . ........    ...+.+++.+||+.||.+|||+.|+++
T Consensus       229 ~-~-~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          229 D-F-DEEYFSNT----SELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             C-C-CHHHHTTC----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             C-C-cchhcccC----CHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence            0 0 00000111    124567899999999999999999987

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=6.2e-39  Score=332.96  Aligned_cols=249  Identities=24%  Similarity=0.344  Sum_probs=203.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|.+.+.||+|+||.||+++... ++.+|+|++...   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            4689999999999999999999864 778999988543   344567889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...   ..+++..++.++.||++||+|||+.+   ++||||||+||+++.++.+||+|||++.....
T Consensus        94 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  167 (294)
T 2rku_A           94 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  167 (294)
T ss_dssp             EECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence            9999999999988543   35889999999999999999999998   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ...  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......   ....   . ...... .+   
T Consensus       168 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~---~-~~~~~~-~~---  234 (294)
T 2rku_A          168 DGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK---ETYL---R-IKKNEY-SI---  234 (294)
T ss_dssp             TTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHH---H-HHTTCC-CC---
T ss_pred             Ccc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHH---H-HhhccC-CC---
Confidence            221  223356899999999999999999999999999999999999998543211   1111   1 111111 00   


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        ....+    ..+.+++.+||+.||.+|||++|+++.
T Consensus       235 --~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          235 --PKHIN----PVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             --CTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             --ccccC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence              01111    245678899999999999999999874

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.1e-38  Score=338.77  Aligned_cols=246  Identities=28%  Similarity=0.456  Sum_probs=198.1

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      +.|++.+.||+|+||.||+|+. .+++.||||++...   .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4588899999999999999997 56889999998643   3344567899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||++ |+|.+++...  ...+++..+..++.|+++||.|||+.+   |+||||||+|||++.++.+||+|||+++.... 
T Consensus       134 e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-  206 (348)
T 1u5q_A          134 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-  206 (348)
T ss_dssp             ECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred             ecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC-
Confidence            9997 6788877543  245899999999999999999999998   99999999999999999999999999986532 


Q ss_pred             CCcccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                           .....||+.|+|||++.   ...++.++||||||+++|||++|+.||.....   ....   ......... ...
T Consensus       207 -----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~---~~~~---~~~~~~~~~-~~~  274 (348)
T 1u5q_A          207 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---MSAL---YHIAQNESP-ALQ  274 (348)
T ss_dssp             -----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHH---HHHHHSCCC-CCC
T ss_pred             -----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh---HHHH---HHHHhcCCC-CCC
Confidence                 22357899999999985   56789999999999999999999999753221   1111   112222111 111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .    ...+    ..+.+++..||+.+|.+|||++++++.
T Consensus       275 ~----~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          275 S----GHWS----EYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             C----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             C----CCCC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            1    1111    235678899999999999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1e-38  Score=340.13  Aligned_cols=268  Identities=22%  Similarity=0.296  Sum_probs=200.7

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-------  455 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------  455 (706)
                      .++|++.++||+|+||.||+|+. .+++.||||++....  ......+.+|+.++++++||||+++++++...       
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            36899999999999999999998 568899999985532  23345778999999999999999999999873       


Q ss_pred             -CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          456 -EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       456 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                       +..++||||+++ +|.+.+....  ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg  169 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFG  169 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccch
Confidence             468999999985 7777664432  34899999999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCCC--cccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh
Q 005236          535 LARAFGGDET--EGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       535 la~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      +++.+.....  ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||...........+........
T Consensus       170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  249 (351)
T 3mi9_A          170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT  249 (351)
T ss_dssp             TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            9987643222  122334578999999999876 4689999999999999999999999864332222222222111111


Q ss_pred             cCCCcccccccc--------cCcCCHHH-------HHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          612 EGMPSQLIDACF--------KDSFNLAE-------VIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       612 ~~~~~~~~d~~~--------~~~~~~~~-------~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ............        .......+       ...+.+++.+||+.||.+|||++|+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            111111100000        00111111       1236789999999999999999999874

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=8.3e-39  Score=338.84  Aligned_cols=252  Identities=22%  Similarity=0.343  Sum_probs=198.2

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ..++|++.+.||+|+||.||+++.+ +++.||||++.....    ...+|++++.++ +||||+++++++.++...++||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            3468999999999999999999985 588999999865432    235688888887 7999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC----CCeEEeeeccccc
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD----MNPKISDFGLARA  538 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~----~~~kl~Dfgla~~  538 (706)
                      ||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+.++    +.+||+|||+++.
T Consensus        96 E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           96 ELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             CCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             eCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            999999999999654   35899999999999999999999998   9999999999998543    3599999999987


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      +.....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||...............    ..+... +
T Consensus       170 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i----~~~~~~-~  242 (342)
T 2qr7_A          170 LRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI----GSGKFS-L  242 (342)
T ss_dssp             CBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH----HHCCCC-C
T ss_pred             CcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH----ccCCcc-c
Confidence            643322  223457899999999998888999999999999999999999998654333322222221    111111 0


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ....+ ...+    ..+.+++..||+.||.+|||+.|+++
T Consensus       243 ~~~~~-~~~s----~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          243 SGGYW-NSVS----DTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             CSTTT-TTSC----HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             Ccccc-ccCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00000 1111    24567899999999999999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=1.1e-38  Score=341.04  Aligned_cols=197  Identities=26%  Similarity=0.378  Sum_probs=174.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.+.||+|+||.||+++.. +++.||+|++... .....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            67999999999999999999985 5889999998653 445567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      +++++|.+++...   ..+++..+..++.|++.||.|||+. +   |+||||||+|||++.++.+||+|||++...... 
T Consensus       113 ~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-  185 (360)
T 3eqc_A          113 MDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-  185 (360)
T ss_dssp             CTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred             CCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence            9999999999654   3488999999999999999999985 6   999999999999999999999999999764211 


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~  593 (706)
                         ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus       186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred             ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence               22335789999999999999999999999999999999999999864

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=9.6e-39  Score=328.76  Aligned_cols=259  Identities=25%  Similarity=0.332  Sum_probs=203.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe--CCeeEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH--GEEKLL  460 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l  460 (706)
                      .++|++.+.||+|+||.||+++.. +++.||+|++..  ......+.+.+|+.++++++||||+++++++..  ....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            468999999999999999999985 588999999864  244556789999999999999999999998865  567899


Q ss_pred             EEecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          461 IYEFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDS--RLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      ||||+++++|.+++.... ....+++..++.++.||+.||+|||+.+  ..+|+||||||+||+++.++.+||+|||+++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            999999999999997543 2345899999999999999999999875  1349999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      .......  ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....   ......    +..+....
T Consensus       165 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~----i~~~~~~~  235 (279)
T 2w5a_A          165 ILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KELAGK----IREGKFRR  235 (279)
T ss_dssp             HC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHH----HHHTCCCC
T ss_pred             eeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---HHHHHH----Hhhccccc
Confidence            7643221  12235689999999999999999999999999999999999999764321   111111    11222211


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      +.     ...+    ..+.+++.+||+.+|.+||+++||++.+..
T Consensus       236 ~~-----~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          236 IP-----YRYS----DELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             CC-----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             CC-----cccC----HHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            11     1111    246678899999999999999999998764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=6e-39  Score=339.26  Aligned_cols=243  Identities=23%  Similarity=0.308  Sum_probs=199.6

Q ss_pred             hccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc--------hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS--------EQGLKELKNEIILFSKLQHRNLVKLLGCCIHG  455 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  455 (706)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++....        ....+.+.+|+.++++++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            457899999999999999999997 458889999986532        11344677899999999999999999999999


Q ss_pred             CeeEEEEecCCCC-ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          456 EEKLLIYEFMPNK-SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       456 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                      +..++||||+.+| +|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg  175 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFG  175 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCT
T ss_pred             CEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecc
Confidence            9999999999777 999998654   34899999999999999999999998   9999999999999999999999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      +++.+....   ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||........           ...
T Consensus       176 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-----------~~~  241 (335)
T 3dls_A          176 SAAYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE-----------AAI  241 (335)
T ss_dssp             TCEECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTT-----------TCC
T ss_pred             cceECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHh-----------hcc
Confidence            998764332   2233578999999999988877 8899999999999999999999853211000           000


Q ss_pred             CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ....        ..+    ..+.+++..||+.||.+|||++|+++.
T Consensus       242 ~~~~--------~~~----~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          242 HPPY--------LVS----KELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             CCSS--------CCC----HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             CCCc--------ccC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0000        111    245678999999999999999999985

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.1e-38  Score=336.36  Aligned_cols=256  Identities=28%  Similarity=0.449  Sum_probs=201.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcE--EEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQE--IAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.+.||+|+||.||+|+.. ++..  +|||++... .....+.+.+|+.+++++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            68999999999999999999975 4554  499988653 344556789999999999 899999999999999999999


Q ss_pred             EecCCCCChhhhhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          462 YEFMPNKSLDSFIFDQE-------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      |||+++++|.+++....             ....+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence            99999999999996542             2346899999999999999999999988   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+|||+++....   ........+++.|+|||++.+..++.++||||||+++|||++ |+.||.....   ...    .
T Consensus       182 kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~---~~~----~  251 (327)
T 1fvr_A          182 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AEL----Y  251 (327)
T ss_dssp             EECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHH----H
T ss_pred             EEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH---HHH----H
Confidence            9999999975321   112223456889999999999899999999999999999998 9999754321   111    1


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      ............     ...    ...+.+++.+||+.+|.+|||++|+++.|+.+.
T Consensus       252 ~~~~~~~~~~~~-----~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  299 (327)
T 1fvr_A          252 EKLPQGYRLEKP-----LNC----DDEVYDLMRQCWREKPYERPSFAQILVSLNRML  299 (327)
T ss_dssp             HHGGGTCCCCCC-----TTB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhhcCCCCCCC-----CCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            111111111100     011    124667899999999999999999999998763

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=3.3e-38  Score=327.50  Aligned_cols=253  Identities=26%  Similarity=0.411  Sum_probs=198.6

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      ++|.....||+|+||.||+|+. .+++.||||++........+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            4455567999999999999997 457899999997766666788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-CCCeEEeeeccccccCCCCC
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgla~~~~~~~~  544 (706)
                      ++++|.+++........+++..+..++.||+.||.|||+.+   ++|+||||+||+++. ++.+||+|||+++...... 
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-  177 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-  177 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence            99999999976544455778889999999999999999988   999999999999987 8999999999998764322 


Q ss_pred             cccccccccccCccCccccccCC--CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQ--FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                       .......|++.|+|||++.+..  ++.++||||||+++|||++|+.||......  ...... ....  .....+    
T Consensus       178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~-~~~~--~~~~~~----  247 (295)
T 2clq_A          178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP--QAAMFK-VGMF--KVHPEI----  247 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH--HHHHHH-HHHH--CCCCCC----
T ss_pred             -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch--hHHHHh-hccc--cccccc----
Confidence             1223356899999999997653  889999999999999999999997532211  111111 1111  111111    


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ....+    ..+.+++.+||+.||++||++.|+++
T Consensus       248 -~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          248 -PESMS----AEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             -CTTSC----HHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             -cccCC----HHHHHHHHHHccCChhhCCCHHHHhc
Confidence             11111    24567889999999999999999985

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=2.4e-38  Score=326.99  Aligned_cols=246  Identities=21%  Similarity=0.308  Sum_probs=197.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++...  .......+.+|+..+.++ +||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            467999999999999999999985 6899999998653  334456788999999999 999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC---------------
Q 005236          462 YEFMPNKSLDSFIFDQER-CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD---------------  525 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~---------------  525 (706)
                      |||+++++|.+++..... ...+++..++.++.||+.||.|||+++   |+||||||+|||++.+               
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            999999999999975432 256899999999999999999999998   9999999999999844               


Q ss_pred             ----CCeEEeeeccccccCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCch
Q 005236          526 ----MNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL  600 (706)
Q Consensus       526 ----~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~  600 (706)
                          ..+||+|||++.......      ...||+.|+|||.+.+. .++.++||||||+++|||++|.+++...      
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------  234 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------  234 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS------
T ss_pred             cCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch------
Confidence                479999999998764322      23589999999999776 6678999999999999999998774321      


Q ss_pred             hHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          601 NLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       601 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ...    ..........+.     ...+    ..+.+++..||+.||.+|||+.|+++.
T Consensus       235 ~~~----~~~~~~~~~~~~-----~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          235 DQW----HEIRQGRLPRIP-----QVLS----QEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             HHH----HHHHTTCCCCCS-----SCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             hHH----HHHHcCCCCCCC-----cccC----HHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence            111    111122221111     1111    245678999999999999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=2.4e-38  Score=349.19  Aligned_cols=261  Identities=19%  Similarity=0.278  Sum_probs=207.7

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCC-cceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH-RNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.++||+|+||.||+|+. .+++.||||++.....  ...+..|+.+++.++| ++|..+..++.+.+..++|||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46899999999999999999997 5688999998754322  2357889999999987 556666777778889999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE---cCCCCeEEeeeccccccC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARAFG  540 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill---~~~~~~kl~Dfgla~~~~  540 (706)
                      |+ +++|.+++....  ..+++..++.|+.||+.||+|||+.+   |+||||||+||||   +.++.+||+|||+++.+.
T Consensus        84 ~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             CC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             CC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            99 999999996432  35899999999999999999999998   9999999999999   688999999999999865


Q ss_pred             CCCCcc-----cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          541 GDETEG-----NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       541 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      ......     ......||+.|+|||++.+..++.++|||||||+||||++|+.||...........+............
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  237 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI  237 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence            433211     222467999999999999999999999999999999999999999766555444444333322222221


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..+..     ..    ...+.+++..||+.+|.+||++++|+++|+.+
T Consensus       238 ~~l~~-----~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          238 EALCR-----GY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHHHT-----TS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHhc-----CC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            11111     11    12567889999999999999999999998754

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=6e-39  Score=342.01  Aligned_cols=261  Identities=16%  Similarity=0.223  Sum_probs=204.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC---------CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceee---------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD---------EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK---------  447 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------  447 (706)
                      .++|++.+.||+|+||.||+|+...         ++.||||.+...     +.+.+|+.++++++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            3689999999999999999999864         789999998643     46789999999999999988         


Q ss_pred             ------eEeEEEe-CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcE
Q 005236          448 ------LLGCCIH-GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNV  520 (706)
Q Consensus       448 ------l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Ni  520 (706)
                            +++++.. ....++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+++   |+||||||+||
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NI  190 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENI  190 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHE
Confidence                  6777776 67889999999 999999997542 346899999999999999999999998   99999999999


Q ss_pred             EEcCCC--CeEEeeeccccccCCCCCc-----ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 005236          521 LLDQDM--NPKISDFGLARAFGGDETE-----GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGF  593 (706)
Q Consensus       521 ll~~~~--~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~  593 (706)
                      |++.++  .+||+|||+++.+......     .......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus       191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  270 (352)
T 2jii_A          191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN  270 (352)
T ss_dssp             EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            999998  9999999999876432211     112335799999999999999999999999999999999999999865


Q ss_pred             CCCCCchhHHHHHHHHhhcCCCccccccccc-CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          594 YHSDNKLNLIRHAWKLWNEGMPSQLIDACFK-DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .....  ..+......+... ...+.+.... ...+    ..+.+++..||+.||.+||++++|++.|+.+
T Consensus       271 ~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  334 (352)
T 2jii_A          271 CLPNT--EDIMKQKQKFVDK-PGPFVGPCGHWIRPS----ETLQKYLKVVMALTYEEKPPYAMLRNNLEAL  334 (352)
T ss_dssp             GTTCH--HHHHHHHHHHHHS-CCCEECTTSCEECCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             CCcCH--HHHHHHHHhccCC-hhhhhhhccccCCCc----HHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence            43221  2222222222111 1122221111 0111    2466788999999999999999999999876

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=7.9e-39  Score=329.36  Aligned_cols=250  Identities=26%  Similarity=0.381  Sum_probs=195.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-CeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-EEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e~  464 (706)
                      .++|++.+.||+|+||.||+++.. ++.||||++....  ..+.+.+|+.++++++||||+++++++.+. +..++||||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            368999999999999999999884 7899999986543  457889999999999999999999997655 478999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++.... ...+++..++.++.|++.||+|||+.+   ++||||||+||+++.++.+||+|||+++.....  
T Consensus        97 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--  170 (278)
T 1byg_A           97 MAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--  170 (278)
T ss_dssp             CTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred             CCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence            99999999996542 234788999999999999999999988   999999999999999999999999999864322  


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                         .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......   .....    ..........    
T Consensus       171 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~~----~~~~~~~~~~----  236 (278)
T 1byg_A          171 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPR----VEKGYKMDAP----  236 (278)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHHH----HTTTCCCCCC----
T ss_pred             ---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HhcCCCCCCc----
Confidence               122457889999999999999999999999999999998 99997643322   11111    1111111111    


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       ...    ...+.+++..||+.||.+|||+.|+++.|+.+
T Consensus       237 -~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          237 -DGC----PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             -TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -ccC----CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence             111    12466788999999999999999999999865

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=6.1e-38  Score=326.95  Aligned_cols=249  Identities=26%  Similarity=0.448  Sum_probs=204.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .+.|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            357999999999999999999874 5889999998643 23456789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++..    ..+++..+..++.||+.||.|||+.+   |+|+||||+||+++.++.+||+|||++.......
T Consensus       101 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A          101 YLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             CCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred             eCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc
Confidence            9999999999853    35899999999999999999999998   9999999999999999999999999998764332


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      .  ......||+.|+|||++.+..++.++||||||+++|||++|+.|+.....   ......    ........+     
T Consensus       174 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~----~~~~~~~~~-----  239 (303)
T 3a7i_A          174 I--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP---MKVLFL----IPKNNPPTL-----  239 (303)
T ss_dssp             C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHH----HHHSCCCCC-----
T ss_pred             c--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH---HHHHHH----hhcCCCCCC-----
Confidence            2  22345789999999999999999999999999999999999999754321   111111    111111111     


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ....+    ..+.+++..||+.+|.+|||+.||++.
T Consensus       240 ~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          240 EGNYS----KPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             CSSCC----HHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             ccccC----HHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            11112    246678999999999999999999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=3.4e-38  Score=329.07  Aligned_cols=252  Identities=22%  Similarity=0.302  Sum_probs=197.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc----hhhHHHHHHHHHHHhhcCCcceeeeEeEEE--eCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS----EQGLKELKNEIILFSKLQHRNLVKLLGCCI--HGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~  458 (706)
                      .++|.+.+.||+|+||.||++... +++.||||++....    ....+.+.+|+.++++++||||+++++++.  +....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            478999999999999999999984 57899999986532    234678999999999999999999999985  44578


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||++++ |.+++.... ...+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++..
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence            9999999987 767665432 346899999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCCCcccccccccccCccCccccccCC--CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQ--FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      ..............||+.|+|||++.+..  ++.++||||||+++|||++|+.||....   ......    .+..... 
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~----~i~~~~~-  230 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN---IYKLFE----NIGKGSY-  230 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHH----HHHHCCC-
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch---HHHHHH----HHhcCCC-
Confidence            65433333334457899999999997654  4789999999999999999999975422   111111    1111111 


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+     ....+    ..+.+++.+||+.||.+|||++|+++.
T Consensus       231 ~~-----~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          231 AI-----PGDCG----PPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             CC-----CSSSC----HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             CC-----CCccC----HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            00     01111    245678899999999999999999964

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=8.7e-39  Score=330.11  Aligned_cols=246  Identities=24%  Similarity=0.332  Sum_probs=201.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            368999999999999999999985 47789999986432   22356789999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...   ..+++..++.++.||+.||.|||+.+   ++||||||+||+++.++.+||+|||++.....
T Consensus        93 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  166 (284)
T 2vgo_A           93 LEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS  166 (284)
T ss_dssp             ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred             EEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence            9999999999999654   34889999999999999999999988   99999999999999999999999999976532


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      .    ......|++.|+|||++.+..++.++||||||+++|||++|+.||.....   .....   ... .... .    
T Consensus       167 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~---~~~-~~~~-~----  230 (284)
T 2vgo_A          167 L----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH---TETHR---RIV-NVDL-K----  230 (284)
T ss_dssp             S----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHH---HHH-TTCC-C----
T ss_pred             c----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH---hHHHH---HHh-cccc-C----
Confidence            2    12335689999999999999999999999999999999999999754321   11111   111 1111 0    


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       +....+    ..+.+++.+||+.+|.+||+++|+++
T Consensus       231 -~~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          231 -FPPFLS----DGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             -CCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -CCCcCC----HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence             001111    24567899999999999999999986

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=2.4e-38  Score=345.00  Aligned_cols=254  Identities=23%  Similarity=0.328  Sum_probs=190.8

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--------hhhHHHHHHHHHHHhhcCCcceeeeEeEEEe
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--------EQGLKELKNEIILFSKLQHRNLVKLLGCCIH  454 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  454 (706)
                      ...++|.+.++||+|+||.||+|... +++.||||++....        ......+.+|+.++++++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            34578999999999999999999985 47899999986421        122335889999999999999999999975 


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC---CeEEe
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM---NPKIS  531 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~---~~kl~  531 (706)
                      .+..++||||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++   .+||+
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~  284 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT  284 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred             cCceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEe
Confidence            55689999999999999988543   45899999999999999999999988   99999999999997544   59999


Q ss_pred             eeccccccCCCCCcccccccccccCccCcccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHH
Q 005236          532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD---GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK  608 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  608 (706)
                      |||+++.....   .......||+.|+|||++.+   ..++.++||||||+++|||++|+.||........  .....  
T Consensus       285 DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~i--  357 (419)
T 3i6u_A          285 DFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQI--  357 (419)
T ss_dssp             CSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHHHH--
T ss_pred             ecccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHHHH--
Confidence            99999876432   12234679999999999863   6788999999999999999999999865333222  11111  


Q ss_pred             HhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       609 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        ...... .....+ ...    ...+.+++.+||+.||.+|||++|+++.
T Consensus       358 --~~~~~~-~~~~~~-~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          358 --TSGKYN-FIPEVW-AEV----SEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             --HTTCCC-CCHHHH-TTS----CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             --hcCCCC-CCchhh-ccc----CHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence              111111 000000 011    1246688999999999999999999863

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-38  Score=339.14  Aligned_cols=266  Identities=27%  Similarity=0.317  Sum_probs=197.1

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchh-----hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQ-----GLKELKNEIILFSKLQHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  457 (706)
                      ...++|++.+.||+|+||.||+|+.. +++.||||++......     ..+.+.+|+.++++++||||+++++++.+...
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            34578999999999999999999985 4889999998643221     12467899999999999999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+++ +|.+++...  ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK  160 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred             eEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccce
Confidence            9999999986 888888543  245788899999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      .+....  .......||+.|+|||++.+. .++.++||||||+++|||++|.+||....   ..................
T Consensus       161 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~---~~~~~~~i~~~~~~~~~~  235 (346)
T 1ua2_A          161 SFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS---DLDQLTRIFETLGTPTEE  235 (346)
T ss_dssp             TTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHHHCCCCTT
T ss_pred             eccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC---HHHHHHHHHHHcCCCChh
Confidence            764322  122335789999999999764 58999999999999999999999875432   222222222222111111


Q ss_pred             ccc------cccc---cCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHHh
Q 005236          617 QLI------DACF---KDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILML  660 (706)
Q Consensus       617 ~~~------d~~~---~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L  660 (706)
                      ...      +...   .......     ....+.+++..||+.||.+|||++|+++.-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~  293 (346)
T 1ua2_A          236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK  293 (346)
T ss_dssp             TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred             hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence            000      0000   0001111     113567899999999999999999998753

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.1e-39  Score=348.87  Aligned_cols=242  Identities=16%  Similarity=0.165  Sum_probs=188.8

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc---cchhhHHHHHHHH---HHHhhcCCcceeeeE-------eE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK---ISEQGLKELKNEI---ILFSKLQHRNLVKLL-------GC  451 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~  451 (706)
                      .++|++.+.||+|+||.||+|+. .+++.||||++..   ......+.+.+|+   .++++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46899999999999999999997 4589999999863   3444567899999   555666899999998       66


Q ss_pred             EEeCC-----------------eeEEEEecCCCCChhhhhhccccc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCce
Q 005236          452 CIHGE-----------------EKLLIYEFMPNKSLDSFIFDQERC----KLLDWSKRFHIICGTARGLLYLHQDSRLRI  510 (706)
Q Consensus       452 ~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~~~----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i  510 (706)
                      +...+                 ..++||||+ +|+|.+++......    ..+++..++.++.||+.||+|||+++   |
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            65543                 278999999 68999999754321    12335888899999999999999998   9


Q ss_pred             EecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccC-----------CCCcchhhHHHHH
Q 005236          511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-----------QFSVKSDVFSFGI  579 (706)
Q Consensus       511 vH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~~sDv~SlGv  579 (706)
                      +||||||+||||+.++.+||+|||+++....     ......| +.|+|||++.+.           .++.++|||||||
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            9999999999999999999999999986322     2233567 999999999887           8999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          580 LLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       580 il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ++|||++|+.||..........               .+....  ...+    ..+.+++.+||+.||.+|||+.|+++
T Consensus       302 il~elltg~~Pf~~~~~~~~~~---------------~~~~~~--~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          302 VIYWIWCADLPITKDAALGGSE---------------WIFRSC--KNIP----QPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHHHHSSCCC------CCSG---------------GGGSSC--CCCC----HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHHHHCCCCCcccccccchh---------------hhhhhc--cCCC----HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            9999999999985433222111               111100  1111    24567899999999999999999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=2.3e-38  Score=361.54  Aligned_cols=248  Identities=29%  Similarity=0.407  Sum_probs=195.2

Q ss_pred             ceeccCCceeEEEEEeC---CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLA---DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      ++||+|+||.||+|.+.   .++.||||+++..  .....+++.+|+.++++++|||||++++++. .+..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence            47999999999999653   4678999999753  3344688999999999999999999999986 4568899999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc-c
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE-G  546 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~-~  546 (706)
                      |+|.+++...   ..+++..++.++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+++.+...... .
T Consensus       454 g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~  527 (635)
T 4fl3_A          454 GPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  527 (635)
T ss_dssp             EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred             CCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence            9999999543   45889999999999999999999998   999999999999999999999999999987543322 2


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......+|+.|+|||++.+..++.++|||||||+||||++ |+.||......   ....    .+..+.......     
T Consensus       528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~~----~i~~~~~~~~p~-----  595 (635)
T 4fl3_A          528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTA----MLEKGERMGCPA-----  595 (635)
T ss_dssp             -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHH----HHHTTCCCCCCT-----
T ss_pred             cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCCCCCC-----
Confidence            2233457889999999999999999999999999999998 99997543221   1111    111221111111     


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..    ...+.+++..||+.||++||++++|++.|+..
T Consensus       596 ~~----~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          596 GC----PREMYDLMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             TC----CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CC----CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            11    13466789999999999999999999999753

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.7e-39  Score=341.98  Aligned_cols=256  Identities=24%  Similarity=0.354  Sum_probs=194.0

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE------  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  456 (706)
                      .++|++.+.||+|+||.||+|+. .+++.||||++..  ......+.+.+|+.++++++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46899999999999999999998 4589999999854  34445678899999999999999999999997653      


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      ..++||||+ +++|.+++..    ..+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecc
Confidence            459999999 8899999854    34889999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      +.....     .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.....   ............. ..
T Consensus       176 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~l~~i~~~~g~-~~  246 (367)
T 1cm8_A          176 RQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH---LDQLKEIMKVTGT-PP  246 (367)
T ss_dssp             EECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHHHCC-CC
T ss_pred             cccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhcCC-CC
Confidence            875322     233578999999999987 6899999999999999999999999864332   1222211111100 00


Q ss_pred             cccc-------------------cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 SQLI-------------------DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ~~~~-------------------d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+++                   ...+.... ......+.+++.+||+.||.+|||++|+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          247 AEFVQRLQSDEAKNYMKGLPELEKKDFASIL-TNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTC-TTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHC-CCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence            0000                   00000000 0011246688999999999999999999984

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.4e-37  Score=322.11  Aligned_cols=249  Identities=24%  Similarity=0.377  Sum_probs=197.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe----CCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH----GEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~  459 (706)
                      +.|.+.+.||+|+||.||+|... ++..||+|++..  ......+.+.+|+.++++++||||+++++++..    ....+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            45788899999999999999985 477899999864  345567789999999999999999999999875    35689


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-CCCCeEEeeeccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARA  538 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~kl~Dfgla~~  538 (706)
                      +||||+++++|.+++...   ..+++..++.++.||+.||.|||+.+ .+|+||||||+|||++ +++.+||+|||++..
T Consensus       106 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence            999999999999999653   45889999999999999999999874 2499999999999998 889999999999976


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ....    ......||+.|+|||++. ..++.++||||||+++|+|++|+.||.....  ....    ............
T Consensus       182 ~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~----~~~~~~~~~~~~  250 (290)
T 1t4h_A          182 KRAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQI----YRRVTSGVKPAS  250 (290)
T ss_dssp             CCTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHH----HHHHTTTCCCGG
T ss_pred             cccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc--HHHH----HHHHhccCCccc
Confidence            4322    223356899999999886 4599999999999999999999999754221  1111    111112211111


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .+.    ...    ..+.+++..||+.||.+|||++||++
T Consensus       251 ~~~----~~~----~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          251 FDK----VAI----PEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             GGG----CCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCC----CCC----HHHHHHHHHHccCChhhCCCHHHHhh
Confidence            111    111    24667899999999999999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.6e-38  Score=353.54  Aligned_cols=252  Identities=26%  Similarity=0.360  Sum_probs=200.3

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ..++|++.++||+|+||.||+++.. +++.||||++...  .....+.+.+|+.++++++||||+++++++.+....++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            3468999999999999999999985 6889999998642  233467889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc---CCCCeEEeeeccccc
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARA  538 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~---~~~~~kl~Dfgla~~  538 (706)
                      |||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++   .++.+||+|||+++.
T Consensus       100 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  173 (486)
T 3mwu_A          100 GELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (486)
T ss_dssp             ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred             EEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence            9999999999988654   35899999999999999999999998   99999999999995   556799999999987


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      +....   ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||....   .........    .+.....
T Consensus       174 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~~i~----~~~~~~~  242 (486)
T 3mwu_A          174 FQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN---EYDILKRVE----TGKYAFD  242 (486)
T ss_dssp             BCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHH----HTCCCSC
T ss_pred             CCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHH----hCCCCCC
Confidence            64322   2233579999999999875 59999999999999999999999975422   122222211    1111100


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       .+.+. ..+    ..+.+++..||+.+|.+|||+.|+++.
T Consensus       243 -~~~~~-~~s----~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          243 -LPQWR-TIS----DDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             -SGGGG-GSC----HHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             -CcccC-CCC----HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             00111 111    245688999999999999999999874

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.3e-38  Score=327.34  Aligned_cols=248  Identities=24%  Similarity=0.376  Sum_probs=194.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++....   ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            468999999999999999999985 68899999986532   23456889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   ++|+||||+||+++.++.+||+|||++.....
T Consensus        90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A           90 MEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred             EeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCC
Confidence            9999999999999654   34889999999999999999999998   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ..   ......+++.|+|||.+.+..+ +.++||||||+++|||++|+.||.....   ......    ....... +  
T Consensus       164 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~----~~~~~~~-~--  230 (276)
T 2h6d_A          164 GE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV---PTLFKK----IRGGVFY-I--  230 (276)
T ss_dssp             ----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHH----HHHCCCC-C--
T ss_pred             Cc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH---HHHHHH----hhcCccc-C--
Confidence            22   1223568999999999988765 6899999999999999999999754221   111111    1111110 0  


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                         ....+    ..+.+++.+||+.||.+|||++||++.
T Consensus       231 ---~~~~~----~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          231 ---PEYLN----RSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             ---CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             ---chhcC----HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence               01111    245678999999999999999999974

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=4.1e-38  Score=327.36  Aligned_cols=254  Identities=21%  Similarity=0.314  Sum_probs=201.0

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---------hhhHHHHHHHHHHHhhcC-CcceeeeEeE
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---------EQGLKELKNEIILFSKLQ-HRNLVKLLGC  451 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~  451 (706)
                      ....++|++.+.||+|+||.||+|+.. +++.||||++....         ....+.+.+|+.+++++. ||||++++++
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (298)
T 1phk_A           13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT   92 (298)
T ss_dssp             --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence            344578999999999999999999985 57899999985432         223467889999999996 9999999999


Q ss_pred             EEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEe
Q 005236          452 CIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS  531 (706)
Q Consensus       452 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~  531 (706)
                      +......++||||+++++|.+++...   ..+++..++.++.||+.||.|||+.+   ++|+||||+||+++.++.+||+
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~  166 (298)
T 1phk_A           93 YETNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLT  166 (298)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEEC
T ss_pred             eccCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEe
Confidence            99999999999999999999999653   35899999999999999999999998   9999999999999999999999


Q ss_pred             eeccccccCCCCCcccccccccccCccCccccc------cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHH
Q 005236          532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS------DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH  605 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~  605 (706)
                      |||++..+....   ......+++.|+|||++.      ...++.++||||||+++|||++|+.||.....   ......
T Consensus       167 dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~  240 (298)
T 1phk_A          167 DFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ---MLMLRM  240 (298)
T ss_dssp             CCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHH
T ss_pred             cccchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH---HHHHHH
Confidence            999998764322   223356899999999985      45789999999999999999999999753221   111111


Q ss_pred             HHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       606 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..    ..... ...+... ..    ...+.+++.+||+.||.+|||+.|+++
T Consensus       241 ~~----~~~~~-~~~~~~~-~~----~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          241 IM----SGNYQ-FGSPEWD-DY----SDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HH----HTCCC-CCTTTGG-GS----CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             Hh----cCCcc-cCccccc-cc----CHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            11    11111 0000000 11    124667899999999999999999975

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=5.5e-38  Score=346.80  Aligned_cols=196  Identities=27%  Similarity=0.432  Sum_probs=155.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-----Ce
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-----EE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  457 (706)
                      .++|++.++||+|+||.||+|+.. +++.||||++..  ......+.+.+|+.++++++||||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            468999999999999999999875 588999999865  3445567899999999999999999999998543     46


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+ +++|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR  204 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEecc-ccchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccch
Confidence            89999998 57899888543   45899999999999999999999998   9999999999999999999999999998


Q ss_pred             ccCCCCCc-------------------------ccccccccccCccCcccc-ccCCCCcchhhHHHHHHHHHHHhCC
Q 005236          538 AFGGDETE-------------------------GNTNRVVGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGK  588 (706)
Q Consensus       538 ~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~s~~sDv~SlGvil~elltG~  588 (706)
                      ........                         ......+||+.|+|||++ ....++.++|||||||+||||++|.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~  281 (458)
T 3rp9_A          205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI  281 (458)
T ss_dssp             CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred             hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence            76432111                         122345789999999986 5667999999999999999999943

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=4.5e-38  Score=327.71  Aligned_cols=252  Identities=26%  Similarity=0.438  Sum_probs=197.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            468999999999999999999986 4889999999776666778899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++++|.+++....  ..+++..+..++.||+.||.|||+.+   ++||||||+||+++.++.+||+|||++......  
T Consensus        98 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--  170 (302)
T 2j7t_A           98 CPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--  170 (302)
T ss_dssp             CTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--
T ss_pred             CCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc--
Confidence            99999999986532  45899999999999999999999988   999999999999999999999999997643111  


Q ss_pred             cccccccccccCccCcccc-----ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          545 EGNTNRVVGTYGYMAPEYA-----SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~-----~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ........||+.|+|||++     ....++.++||||||+++|||++|+.|+.....   ....   .............
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~---~~~~~~~~~~~~~  244 (302)
T 2j7t_A          171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP---MRVL---LKIAKSDPPTLLT  244 (302)
T ss_dssp             HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHH---HHHHHSCCCCCSS
T ss_pred             ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH---HHHH---HHHhccCCcccCC
Confidence            1112235689999999998     366789999999999999999999999754322   1111   1111111111111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..    ..+    ..+.+++.+||+.||.+|||+.++++
T Consensus       245 ~~----~~~----~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          245 PS----KWS----VEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             GG----GSC----HHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             cc----ccC----HHHHHHHHHHcccChhhCCCHHHHhc
Confidence            11    111    24567899999999999999999875

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=2.3e-38  Score=353.04  Aligned_cols=250  Identities=26%  Similarity=0.352  Sum_probs=195.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .++|++.++||+|+||.||+|+.. .+..||||++....  ....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            357999999999999999999985 57899999986532  334577899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC---CCeEEeeecccccc
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLARAF  539 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~---~~~kl~Dfgla~~~  539 (706)
                      ||+++|+|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++..   +.+||+|||+++.+
T Consensus       116 e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~  189 (494)
T 3lij_A          116 ECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF  189 (494)
T ss_dssp             ECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             ecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence            999999999988654   34889999999999999999999998   9999999999999764   55999999999876


Q ss_pred             CCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ....   ......||+.|+|||++. ..++.++|||||||++|+|++|+.||.....   ........    .+... ..
T Consensus       190 ~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~----~~~~~-~~  257 (494)
T 3lij_A          190 ENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD---QEILRKVE----KGKYT-FD  257 (494)
T ss_dssp             BTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHH----HTCCC-CC
T ss_pred             CCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHH----hCCCC-CC
Confidence            4332   223357999999999886 5799999999999999999999999854322   22222211    11110 00


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .+.+. ..+    ..+.+++..||+.+|.+|||++|+++
T Consensus       258 ~~~~~-~~s----~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          258 SPEWK-NVS----EGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             SGGGT-TSC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             chhcc-cCC----HHHHHHHHHHCCCChhhCccHHHHhc
Confidence            11111 111    24567899999999999999999985

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2.1e-38  Score=330.25  Aligned_cols=265  Identities=25%  Similarity=0.403  Sum_probs=186.1

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ...++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            34578999999999999999999874 58899999986532 34456788999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcc-----cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          462 YEFMPNKSLDSFIFDQ-----ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      |||+++++|.+++...     .....+++..++.++.||+.||.|||+.+   ++||||||+||+++.++.+||+|||++
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccch
Confidence            9999999999998642     12345899999999999999999999988   999999999999999999999999999


Q ss_pred             cccCCCCC---cccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc
Q 005236          537 RAFGGDET---EGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE  612 (706)
Q Consensus       537 ~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~  612 (706)
                      ..+.....   ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||.......   ...........
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~  245 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK---VLMLTLQNDPP  245 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---HHHHHHTSSCC
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh---HHHHHhccCCC
Confidence            87643221   112233578999999999876 578999999999999999999999986543321   11111111000


Q ss_pred             CCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       613 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .......+.......+    ..+.+++.+||+.||.+|||+.|+++
T Consensus       246 ~~~~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          246 SLETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             CTTC-----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccccccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhh
Confidence            0001111111111112    24567889999999999999999986

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=7.7e-38  Score=338.96  Aligned_cols=261  Identities=21%  Similarity=0.283  Sum_probs=201.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcC--------CcceeeeEeEEE---
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQ--------HRNLVKLLGCCI---  453 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~---  453 (706)
                      .++|++.++||+|+||.||+|+.. +++.||||++... ....+.+.+|+.+++.++        ||||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            478999999999999999999874 5788999999643 445678889999999985        788999999988   


Q ss_pred             -eCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCC-----
Q 005236          454 -HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDM-----  526 (706)
Q Consensus       454 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~-----  526 (706)
                       .....++||||+ +++|.+++.... ...+++..++.++.||+.||+|||++ +   |+||||||+||||+.++     
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~  189 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRR  189 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHH
T ss_pred             CCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhh
Confidence             456789999999 556666654432 24589999999999999999999998 7   99999999999999775     


Q ss_pred             --------------------------------------------CeEEeeeccccccCCCCCcccccccccccCccCccc
Q 005236          527 --------------------------------------------NPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY  562 (706)
Q Consensus       527 --------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~  562 (706)
                                                                  .+||+|||+++.....     .....||+.|+|||+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~  264 (397)
T 1wak_A          190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEV  264 (397)
T ss_dssp             HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHH
T ss_pred             hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChh
Confidence                                                        8999999999875422     223578999999999


Q ss_pred             cccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhH---HHHHHHHhhcCCCcc----------cccc--------
Q 005236          563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL---IRHAWKLWNEGMPSQ----------LIDA--------  621 (706)
Q Consensus       563 ~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~----------~~d~--------  621 (706)
                      +.+..++.++|||||||++|||++|+.||...........   .......... .+..          .+..        
T Consensus       265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~  343 (397)
T 1wak_A          265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK-VPRKLIVAGKYSKEFFTKKGDLKHIT  343 (397)
T ss_dssp             HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCS-CCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCC-CChHHhhcccccccccCCcccccccc
Confidence            9999999999999999999999999999876544332211   1111111111 1100          0000        


Q ss_pred             ----------cc-cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          622 ----------CF-KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       622 ----------~~-~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                                .. ...........+.+|+.+||+.||.+|||++||++
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          344 KLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             ccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                      00 01123445567889999999999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=2.5e-38  Score=327.73  Aligned_cols=257  Identities=26%  Similarity=0.374  Sum_probs=195.4

Q ss_pred             cCCCccceeccCCceeEEEEEeC--CCc--EEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA--DEQ--EIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      ++|++.+.||+|+||.||+|++.  +++  .||||++...   .....+.+.+|+.++++++||||+++++++.... .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            68999999999999999999863  233  6899988653   3345678999999999999999999999987654 88


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +||||+++++|.+++....  ..+++..+..++.||+.||.|||+.+   ++|+||||+||+++.++.+||+|||+++..
T Consensus        97 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccc
Confidence            9999999999999996542  45889999999999999999999998   999999999999999999999999999876


Q ss_pred             CCCCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          540 GGDETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       540 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ...... .......+|..|+|||++.+..++.++||||||+++|||++ |+.||.....   ......   .........
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~---~~~~~~~~~  245 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---SQILHK---IDKEGERLP  245 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHH---HHTSCCCCC
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH---HHHHHH---HHccCCCCC
Confidence            443221 12233467889999999999899999999999999999999 9999754321   111111   111111111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      ..     ...    ...+.+++.+||+.+|.+|||+.++++.|+...
T Consensus       246 ~~-----~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          246 RP-----EDC----PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             CC-----TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CC-----cCc----CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            10     111    134667899999999999999999999998764

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.4e-38  Score=365.73  Aligned_cols=249  Identities=24%  Similarity=0.294  Sum_probs=201.8

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  459 (706)
                      ..++|++.++||+|+||.||+|+.. +++.||||++.+.   .....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            4578999999999999999999985 4778999998653   233456788899999987 7999999999999999999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +||||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++++||+|||+++..
T Consensus       419 lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~  492 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  492 (674)
T ss_dssp             EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred             EEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence            999999999999999654   34899999999999999999999998   999999999999999999999999999864


Q ss_pred             CCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ....  .......||+.|+|||++.+..++.++|||||||+||||++|+.||....   ........   . .... .+ 
T Consensus       493 ~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~---~~~~~~~i---~-~~~~-~~-  561 (674)
T 3pfq_A          493 IWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---EDELFQSI---M-EHNV-AY-  561 (674)
T ss_dssp             CCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHH---H-SSCC-CC-
T ss_pred             ccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC---HHHHHHHH---H-hCCC-CC-
Confidence            3222  22344689999999999999999999999999999999999999985422   22222211   1 1111 00 


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCCh-----hHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM-----PSVIL  658 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~-----~ev~~  658 (706)
                          ....+    ..+.+|+..||+.||.+||++     +||++
T Consensus       562 ----p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          562 ----PKSMS----KEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             ----CTTSC----HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             ----CccCC----HHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence                01111    246678999999999999998     66653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=2.2e-38  Score=342.63  Aligned_cols=261  Identities=20%  Similarity=0.261  Sum_probs=195.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe------eE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE------KL  459 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~~  459 (706)
                      ..+|++.++||+|+||.||+|+...+..+|+|++.....    ...+|+.+++.++||||+++++++.....      .+
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            357999999999999999999998877899998854322    22469999999999999999999976443      78


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-CCCCeEEeeeccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARA  538 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~kl~Dfgla~~  538 (706)
                      +||||++++.+............+++..+..++.||++||+|||+.+   |+||||||+||||+ .++.+||+|||+++.
T Consensus       115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            99999988655544433333456899999999999999999999998   99999999999999 799999999999987


Q ss_pred             cCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC----
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG----  613 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~----  613 (706)
                      +.....   .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+   ............    
T Consensus       192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~l~~i~~~~g~p~~~~  265 (394)
T 4e7w_A          192 LIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID---QLVEIIKVLGTPSREQ  265 (394)
T ss_dssp             CCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCHHH
T ss_pred             ccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHH
Confidence            643222   2235689999999998765 58999999999999999999999986433222   222111111100    


Q ss_pred             -----------CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 -----------MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 -----------~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                                 ....+....+...+.......+.+++.+||+.||.+|||+.|+++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence                       0000000000000011112356789999999999999999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=3.6e-38  Score=352.24  Aligned_cols=252  Identities=26%  Similarity=0.346  Sum_probs=199.1

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch-------------hhHHHHHHHHHHHhhcCCcceeeeEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE-------------QGLKELKNEIILFSKLQHRNLVKLLG  450 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~  450 (706)
                      ..++|.+.++||+|+||.||+|+.. .++.||||++.....             ...+.+.+|+.++++++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            4578999999999999999999985 478999999865321             33578899999999999999999999


Q ss_pred             EEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC---C
Q 005236          451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM---N  527 (706)
Q Consensus       451 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~---~  527 (706)
                      ++.+....++||||+++|+|.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++   .
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~  187 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN  187 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSS
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCcc
Confidence            999999999999999999999998654   34899999999999999999999998   99999999999999776   6


Q ss_pred             eEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH
Q 005236          528 PKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       528 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~  607 (706)
                      +||+|||+++.+....   ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.....   ........
T Consensus       188 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~  260 (504)
T 3q5i_A          188 IKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND---QDIIKKVE  260 (504)
T ss_dssp             EEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHH
T ss_pred             EEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHH
Confidence            9999999998764332   223457999999999986 5699999999999999999999999864322   12221111


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                          .+.... ..+.+ ...+    ..+.+++..||+.||.+|||++|+++.
T Consensus       261 ----~~~~~~-~~~~~-~~~s----~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          261 ----KGKYYF-DFNDW-KNIS----DEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             ----HCCCCC-CHHHH-TTSC----HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ----cCCCCC-Ccccc-CCCC----HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                111100 00000 0111    246678999999999999999999853

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.2e-38  Score=354.73  Aligned_cols=251  Identities=27%  Similarity=0.353  Sum_probs=202.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.++||+|+||.||+++.. +++.||||++...   .....+.+.+|+.++++++||||+++++++.+....++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            357999999999999999999985 6889999998542   234567899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE---cCCCCeEEeeeccccc
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---DQDMNPKISDFGLARA  538 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill---~~~~~~kl~Dfgla~~  538 (706)
                      |||+.+++|.+++...   ..+++..+..++.||+.||.|||+++   |+||||||+|||+   +.++.+||+|||+++.
T Consensus       105 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  178 (484)
T 3nyv_A          105 GEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH  178 (484)
T ss_dssp             ECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred             EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence            9999999999998654   34889999999999999999999998   9999999999999   5678999999999987


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      +....   ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||....   .........    .+.... 
T Consensus       179 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~~i~----~~~~~~-  246 (484)
T 3nyv_A          179 FEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN---EYDILKKVE----KGKYTF-  246 (484)
T ss_dssp             BCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHH----HCCCCC-
T ss_pred             ccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHH----cCCCCC-
Confidence            64332   2234579999999999876 69999999999999999999999985432   222222211    111110 


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..+.+. ..+    ..+.+++..||+.+|.+|||+.|+++.
T Consensus       247 ~~~~~~-~~s----~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          247 ELPQWK-KVS----ESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             CSGGGG-GSC----HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCcccc-cCC----HHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence            001111 111    245678999999999999999999863

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=7.2e-38  Score=330.53  Aligned_cols=255  Identities=19%  Similarity=0.290  Sum_probs=197.0

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEe--CCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIH--GEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lV~  462 (706)
                      ++|++.++||+|+||.||+|+. .+++.||||++....   .+.+.+|+.++++++ ||||+++++++.+  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            6899999999999999999987 568899999986433   467899999999997 9999999999988  56789999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-CeEEeeeccccccCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfgla~~~~~  541 (706)
                      ||+++++|.+++.      .+++..+..++.||+.||+|||+.+   |+||||||+|||++.++ .+||+|||+++....
T Consensus       113 e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  183 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  183 (330)
T ss_dssp             ECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             eccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence            9999999999883      3788899999999999999999998   99999999999999777 899999999987643


Q ss_pred             CCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh---------h
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW---------N  611 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~---------~  611 (706)
                      ..   ......++..|+|||++.+ ..++.++||||||+++|||++|+.||.....  ............         .
T Consensus       184 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~--~~~~l~~~~~~~~~~~~~~~~~  258 (330)
T 3nsz_A          184 GQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD--NYDQLVRIAKVLGTEDLYDYID  258 (330)
T ss_dssp             TC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS--HHHHHHHHHHHHCHHHHHHHHH
T ss_pred             CC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCc--hHHHHHHHHHhcCCchhhhHHH
Confidence            32   2233578999999999977 6799999999999999999999999743222  111111111100         0


Q ss_pred             cCC--------------CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          612 EGM--------------PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       612 ~~~--------------~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ...              ....................+.+++..||+.||.+|||++|+++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            000              00000000000000001235678999999999999999999987

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=6e-38  Score=343.42  Aligned_cols=199  Identities=27%  Similarity=0.444  Sum_probs=167.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-----Ce
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-----EE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  457 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++..  ......+.+.+|+.++++++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            468999999999999999999985 478899999965  3445567899999999999999999999999776     56


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||++ ++|.+++...   ..+++..+..++.||++||+|||+.+   |+||||||+||||+.++.+||+|||+++
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence            899999987 5999998543   45899999999999999999999998   9999999999999999999999999999


Q ss_pred             ccCCCCCc--------------------ccccccccccCccCcccc-ccCCCCcchhhHHHHHHHHHHHhCCCCC
Q 005236          538 AFGGDETE--------------------GNTNRVVGTYGYMAPEYA-SDGQFSVKSDVFSFGILLLEIVSGKKNR  591 (706)
Q Consensus       538 ~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~s~~sDv~SlGvil~elltG~~p~  591 (706)
                      ........                    ......+||+.|+|||++ ....++.++|||||||++|||++|..|+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            76433211                    122456799999999986 5567999999999999999999866554

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=6.7e-38  Score=324.30  Aligned_cols=252  Identities=26%  Similarity=0.384  Sum_probs=186.4

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .++|++.+.||+|+||.||+|+. .+++.||||++...  .....+.+.++...++.++||||+++++++.+++..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            46899999999999999999998 46889999998653  2223344555666688899999999999999999999999


Q ss_pred             ecCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          463 EFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       463 e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||++ |+|.+++... .....+++..++.++.||+.||+|||++ +   |+||||||+||+++.++.+||+|||+++...
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            9997 4888877542 2335689999999999999999999997 7   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCcccc----ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYA----SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      ...   ......||+.|+|||++    ....++.++||||||+++|||++|+.||.....  .....   ..........
T Consensus       162 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~---~~~~~~~~~~  233 (290)
T 3fme_A          162 DDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT--PFQQL---KQVVEEPSPQ  233 (290)
T ss_dssp             -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC--HHHHH---HHHHHSCCCC
T ss_pred             ccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc--hHHHH---HHHhccCCCC
Confidence            322   22234689999999996    556789999999999999999999999853221  11111   1122222111


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ...    ...+    ..+.+++.+||+.||.+|||++|+++
T Consensus       234 -~~~----~~~~----~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          234 -LPA----DKFS----AEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             -CCT----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -ccc----ccCC----HHHHHHHHHHhhcChhhCcCHHHHHh
Confidence             111    1111    24567899999999999999999976

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.2e-38  Score=341.12  Aligned_cols=268  Identities=21%  Similarity=0.276  Sum_probs=198.1

Q ss_pred             HHHHHHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccc-----------hhhHHHHHHHHHHHhhcCCcceee
Q 005236          379 LATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS-----------EQGLKELKNEIILFSKLQHRNLVK  447 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~E~~~l~~l~h~niv~  447 (706)
                      ..++....++|++.+.||+|+||.||+|+..+++.||||++....           ....+.+.+|+.++++++||||++
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            456777889999999999999999999999889999999985421           223478999999999999999999


Q ss_pred             eEeEEEeC-----CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          448 LLGCCIHG-----EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       448 l~~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                      +++++...     ...++||||++ |+|.+++...  ...+++..+..++.||+.||.|||+.+   |+||||||+|||+
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~  167 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILL  167 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEE
T ss_pred             eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEE
Confidence            99998653     25799999998 6888888543  345899999999999999999999998   9999999999999


Q ss_pred             cCCCCeEEeeeccccccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 005236          523 DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLN  601 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~  601 (706)
                      +.++.+||+|||+++.....   .......+|+.|+|||++.+ ..++.++||||||+++|||++|+.||.....   ..
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~  241 (362)
T 3pg1_A          168 ADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF---YN  241 (362)
T ss_dssp             CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HH
T ss_pred             cCCCCEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH---HH
Confidence            99999999999999854322   22234578999999999877 6799999999999999999999999864332   12


Q ss_pred             HHHHHHHHhhcCCCc-------------------ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          602 LIRHAWKLWNEGMPS-------------------QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ...............                   ......+. .........+.+++..||+.||.+|||++|+++.
T Consensus       242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWT-AVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHH-HHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHH-hhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            222221111111100                   00000000 0000011246689999999999999999999864

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.7e-38  Score=338.24  Aligned_cols=257  Identities=24%  Similarity=0.343  Sum_probs=183.6

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC------C
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG------E  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~  456 (706)
                      .++|++.+.||+|+||.||+|+. .+++.||||++..  ......+.+.+|+.+++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            47899999999999999999987 4588999999865  3344567888999999999999999999998754      5


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      ..++|+||+ +++|.+++..    ..+++..+..++.||++||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a  179 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA  179 (367)
T ss_dssp             CCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC----
T ss_pred             eEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecccc
Confidence            679999999 7899998854    35899999999999999999999988   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      +.....     .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....   .............. .
T Consensus       180 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~l~~i~~~~g~p-~  250 (367)
T 2fst_X          180 RHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH---IDQLKLILRLVGTP-G  250 (367)
T ss_dssp             ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCSC-C
T ss_pred             cccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCC-C
Confidence            875322     233578999999999987 6899999999999999999999999864332   22222222211110 0


Q ss_pred             ccccccc------------c-cCcCCHHH-----HHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 SQLIDAC------------F-KDSFNLAE-----VIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ~~~~d~~------------~-~~~~~~~~-----~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+.+...            . ........     ...+.+|+.+||+.||.+|||+.|+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            0000000            0 00011111     1246789999999999999999999874

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.9e-38  Score=340.57  Aligned_cols=254  Identities=11%  Similarity=0.057  Sum_probs=180.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhc--CCcceeeeE-------eEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELKNEIILFSKL--QHRNLVKLL-------GCC  452 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~  452 (706)
                      ..+|.+.++||+|+||.||+|++. +++.||||++....   ....+.+.+|+.+++.+  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            346899999999999999999975 68899999987633   34456778886555555  699988755       444


Q ss_pred             EeC-----------------CeeEEEEecCCCCChhhhhhcccccCCCCHHHH------HHHHHHHHHHHHHHHhCCCCc
Q 005236          453 IHG-----------------EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR------FHIICGTARGLLYLHQDSRLR  509 (706)
Q Consensus       453 ~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~  509 (706)
                      ...                 ...++||||++ |+|.+++.....  .+.+..+      +.++.||+.||+|||+++   
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---  214 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSKG---  214 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---
Confidence            433                 33799999999 899999976432  3455555      778899999999999998   


Q ss_pred             eEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhC
Q 005236          510 IIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSG  587 (706)
Q Consensus       510 ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG  587 (706)
                      |+||||||+||||+.++.+||+|||+++.....     .....+|+.|+|||++.+  ..++.++|||||||++|||++|
T Consensus       215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg  289 (371)
T 3q60_A          215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL  289 (371)
T ss_dssp             EEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred             CccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence            999999999999999999999999999875321     113567799999999987  6899999999999999999999


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          588 KKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       588 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +.||..............   ............+.. ...    ...+.+++.+||+.||++|||+.|+++
T Consensus       290 ~~Pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~----~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          290 FLPFGLVTPGIKGSWKRP---SLRVPGTDSLAFGSC-TPL----PDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             SCSTTBCCTTCTTCCCBC---CTTSCCCCSCCCTTS-SCC----CHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCCCCCcCcccccchhhh---hhhhccccccchhhc-cCC----CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            999865433211100000   000000000000000 011    234667899999999999999999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.1e-38  Score=340.44  Aligned_cols=261  Identities=20%  Similarity=0.252  Sum_probs=193.8

Q ss_pred             HhccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-------
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-------  455 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------  455 (706)
                      ...++|++.+.||+|+||.||+|+. .+++.||||++.....    ...+|+.+++.++||||+++++++...       
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~   79 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP   79 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence            4567899999999999999999997 5689999999854322    234799999999999999999998543       


Q ss_pred             -------------------------------CeeEEEEecCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHH
Q 005236          456 -------------------------------EEKLLIYEFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLH  503 (706)
Q Consensus       456 -------------------------------~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH  503 (706)
                                                     ...++||||++ ++|.+.+... .....+++..+..++.||++||+|||
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  158 (383)
T 3eb0_A           80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH  158 (383)
T ss_dssp             ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                                           34789999998 5888777542 23356899999999999999999999


Q ss_pred             hCCCCceEecccCCCcEEEc-CCCCeEEeeeccccccCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHH
Q 005236          504 QDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILL  581 (706)
Q Consensus       504 ~~~~~~ivH~Dikp~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil  581 (706)
                      +.+   |+||||||+|||++ .++.+||+|||+++.+....   ......+|+.|+|||++.+. .++.++||||+||++
T Consensus       159 ~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  232 (383)
T 3eb0_A          159 SLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF  232 (383)
T ss_dssp             TTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence            988   99999999999998 68999999999998764332   22335689999999998775 589999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC---------------CcccccccccCcCCHHHHHHHHHHHHHhcCCC
Q 005236          582 LEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM---------------PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQY  646 (706)
Q Consensus       582 ~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~  646 (706)
                      |||++|+.||......   ..............               ...+....+...........+.+++.+||+.|
T Consensus       233 ~ell~g~~pf~~~~~~---~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  309 (383)
T 3eb0_A          233 GELILGKPLFSGETSI---DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE  309 (383)
T ss_dssp             HHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred             HHHHhCCCCCCCCChH---HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence            9999999998643322   22222221111110               00000000100011111224678999999999


Q ss_pred             CCCCCChhHHHH
Q 005236          647 PEDRPCMPSVIL  658 (706)
Q Consensus       647 p~~RPt~~ev~~  658 (706)
                      |.+|||+.|+++
T Consensus       310 P~~R~t~~e~l~  321 (383)
T 3eb0_A          310 PDLRINPYEAMA  321 (383)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             hhhCCCHHHHhc
Confidence            999999999984

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.5e-37  Score=339.55  Aligned_cols=198  Identities=23%  Similarity=0.305  Sum_probs=171.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhc------CCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKL------QHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~  458 (706)
                      ..+|++.++||+|+||.||+|+... ++.||||++... ....+.+.+|+.+++.+      +|+||+++++++......
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            4679999999999999999998854 789999999653 34456778888888877      577999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC--eEEeeeccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN--PKISDFGLA  536 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~--~kl~Dfgla  536 (706)
                      ++||||+. ++|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.  +||+|||++
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             EEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccc
Confidence            99999996 68999886543 244899999999999999999999998   999999999999999987  999999999


Q ss_pred             cccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFY  594 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~  594 (706)
                      +.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       250 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          250 CYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             EETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             eecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            764322     22357899999999999999999999999999999999999997643

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=3e-37  Score=323.44  Aligned_cols=251  Identities=27%  Similarity=0.443  Sum_probs=197.6

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++....  ..+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4578999999999999999999985 48899999986532  34678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++++|.+++...  ...+++..++.++.||+.||.|||+.+   ++|+||||+||+++.++.+||+|||++.......
T Consensus       105 ~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (314)
T 3com_A          105 YCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM  179 (314)
T ss_dssp             CCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred             cCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence            99999999998532  345899999999999999999999988   9999999999999999999999999998764322


Q ss_pred             CcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      .  ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....   ....   ...... ....+..+  
T Consensus       180 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~---~~~~~~-~~~~~~~~--  248 (314)
T 3com_A          180 A--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP---MRAI---FMIPTN-PPPTFRKP--  248 (314)
T ss_dssp             S--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH---HHHH---HHHHHS-CCCCCSSG--
T ss_pred             c--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh---HHHH---HHHhcC-CCcccCCc--
Confidence            1  22335689999999999999999999999999999999999999754321   1111   111111 11111000  


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ...    ...+.+++..||+.||.+|||+.++++
T Consensus       249 -~~~----~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          249 -ELW----SDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             -GGS----CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -ccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence             011    124567899999999999999999976

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=7.9e-38  Score=335.69  Aligned_cols=259  Identities=23%  Similarity=0.282  Sum_probs=191.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE------  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  456 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++..  ......+.+.+|+.+++.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            478999999999999999999874 588999999864  23455678889999999999999999999997654      


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      ..++||||+++ +|.+++.     ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  174 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  174 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred             ceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecc
Confidence            67999999975 7877773     23788999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC---
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG---  613 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---  613 (706)
                      +......   ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..............   
T Consensus       175 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~  248 (371)
T 2xrw_A          175 RTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH---IDQWNKVIEQLGTPCPE  248 (371)
T ss_dssp             ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHC-CCCCCHH
T ss_pred             ccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCCHH
Confidence            8753221   22335789999999999999999999999999999999999999854322   11111111110000   


Q ss_pred             ---------------CC-------cccccccccCcCC---HHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 ---------------MP-------SQLIDACFKDSFN---LAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 ---------------~~-------~~~~d~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                                     ..       ..++.........   ......+.+++.+||+.||.+|||++|+++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          249 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                           00       0000000000000   1123467889999999999999999999874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=3.1e-37  Score=330.34  Aligned_cols=263  Identities=22%  Similarity=0.321  Sum_probs=200.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-----Cee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-----EEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  458 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++.+++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            368999999999999999999975 5788999998753 344457889999999999999999999999765     367


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||++ ++|.+++..    ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.
T Consensus       106 ~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             EEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEe
Confidence            99999998 589998854    34899999999999999999999998   99999999999999999999999999987


Q ss_pred             cCCCCCcc-cccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          539 FGGDETEG-NTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       539 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      ........ ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+....+   ..........
T Consensus       178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i---~~~~~~~~~~  254 (364)
T 3qyz_A          178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI---LGILGSPSQE  254 (364)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHH---HHHHCSCCHH
T ss_pred             cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHH---HHHhCCCCHH
Confidence            64332211 2234579999999998754 45899999999999999999999998654433322222   1111111000


Q ss_pred             cc---cc--------ccc-cCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          617 QL---ID--------ACF-KDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       617 ~~---~d--------~~~-~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+   .+        ... .......     ....+.+++.+||+.||.+|||++|+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00   00        000 0000000     11246789999999999999999999863

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.7e-37  Score=325.24  Aligned_cols=255  Identities=26%  Similarity=0.348  Sum_probs=196.5

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcC--CcceeeeEeEEEeCCee
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQ--HRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~  458 (706)
                      ....++|++.+.||+|+||.||+++..+++.||||++..  ......+.+.+|+.++.+++  ||||+++++++.+.+..
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~  103 (313)
T 3cek_A           24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI  103 (313)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred             eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence            344578999999999999999999998899999999854  34556688999999999997  59999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||| +.+++|.+++...   ..+++..++.++.||++||.|||+.+   |+||||||+|||+++ +.+||+|||+++.
T Consensus       104 ~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~  175 (313)
T 3cek_A          104 YMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQ  175 (313)
T ss_dssp             EEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred             EEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeecccccc
Confidence            99999 6788999999653   35889999999999999999999998   999999999999964 8999999999987


Q ss_pred             cCCCCCcccccccccccCccCcccccc-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASD-----------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ..............||+.|+|||.+.+           ..++.++||||||+++|||++|+.||.....     ......
T Consensus       176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~  250 (313)
T 3cek_A          176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLH  250 (313)
T ss_dssp             --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHH
T ss_pred             ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHH
Confidence            654433333344578999999999875           4788999999999999999999999853221     111111


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..........+.+     ..    ...+.+++.+||+.||.+||+++|+++.
T Consensus       251 ~~~~~~~~~~~~~-----~~----~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          251 AIIDPNHEIEFPD-----IP----EKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             HHHCTTSCCCCCC-----CS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHhcccccCCcc-----cc----hHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence            2221111111111     11    1245678899999999999999999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.3e-37  Score=329.54  Aligned_cols=259  Identities=22%  Similarity=0.303  Sum_probs=202.3

Q ss_pred             ccCCCccceeccCCceeEEEEEe--CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc------eeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL--ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN------LVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~  457 (706)
                      .++|++.+.||+|+||.||+|..  .+++.||||++... ....+.+.+|+.+++.++|++      ++++++++.+.+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            36899999999999999999987  35789999998653 344677889999999987665      9999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-------------
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-------------  524 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-------------  524 (706)
                      .++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.             
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             EEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccc
Confidence            99999999 899999986543 245889999999999999999999998   999999999999987             


Q ss_pred             ------CCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 005236          525 ------DMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN  598 (706)
Q Consensus       525 ------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~  598 (706)
                            ++.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  241 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE  241 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred             ccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence                  678999999999874322     223578999999999999999999999999999999999999986543322


Q ss_pred             chhHHHHHHHHhhcCCCccccc------------------------------ccc-cCcCCHHHHHHHHHHHHHhcCCCC
Q 005236          599 KLNLIRHAWKLWNEGMPSQLID------------------------------ACF-KDSFNLAEVIRCIHIGLLCVQQYP  647 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~d------------------------------~~~-~~~~~~~~~~~~~~l~~~cl~~~p  647 (706)
                      ....+..   .. ...+.....                              +.. ...........+.+++.+||+.||
T Consensus       242 ~~~~~~~---~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  317 (339)
T 1z57_A          242 HLAMMER---IL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP  317 (339)
T ss_dssp             HHHHHHH---HH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred             HHHHHHH---Hh-CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence            1111111   11 111110000                              000 001112334567889999999999


Q ss_pred             CCCCChhHHHHH
Q 005236          648 EDRPCMPSVILM  659 (706)
Q Consensus       648 ~~RPt~~ev~~~  659 (706)
                      .+|||++||++.
T Consensus       318 ~~Rpt~~ell~h  329 (339)
T 1z57_A          318 AKRITLREALKH  329 (339)
T ss_dssp             TTSCCHHHHTTS
T ss_pred             ccccCHHHHhcC
Confidence            999999999753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.2e-38  Score=330.44  Aligned_cols=256  Identities=27%  Similarity=0.436  Sum_probs=196.2

Q ss_pred             HHHHhccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEe----
Q 005236          381 TIANATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIH----  454 (706)
Q Consensus       381 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----  454 (706)
                      .+....++|++.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++++ +||||+++++++..    
T Consensus        18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   96 (326)
T 2x7f_A           18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP   96 (326)
T ss_dssp             CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred             hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence            3344568999999999999999999998 468899999986432 3346788999999999 79999999999987    


Q ss_pred             --CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          455 --GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       455 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                        ....++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+   |+|+||||+|||++.++.+||+|
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~D  172 (326)
T 2x7f_A           97 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVD  172 (326)
T ss_dssp             CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECC
T ss_pred             cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEee
Confidence              467899999999999999996543 345889999999999999999999998   99999999999999999999999


Q ss_pred             eccccccCCCCCcccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||++.......  .......||+.|+|||++.     ...++.++||||||+++|||++|+.||.....   ....   .
T Consensus       173 fg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~---~  244 (326)
T 2x7f_A          173 FGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP---MRAL---F  244 (326)
T ss_dssp             CTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH---HHHH---H
T ss_pred             CcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH---HHHH---H
Confidence            99998753221  1223357899999999997     56789999999999999999999999753221   1111   1


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ....... .....    ...+    ..+.+++.+||+.||.+||++.++++
T Consensus       245 ~~~~~~~-~~~~~----~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          245 LIPRNPA-PRLKS----KKWS----KKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHSCC-CCCSC----SCSC----HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HhhcCcc-ccCCc----cccC----HHHHHHHHHHhccChhhCCCHHHHhh
Confidence            1111111 11111    1111    24567889999999999999999987

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=326.88  Aligned_cols=262  Identities=22%  Similarity=0.302  Sum_probs=193.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEE-----------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCI-----------  453 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-----------  453 (706)
                      .++|++.+.||+|+||.||+|+... ++.||||++........+.+.+|+.++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            3689999999999999999999865 8899999997777777888999999999999999999999873           


Q ss_pred             ---eCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-CCCCeE
Q 005236          454 ---HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPK  529 (706)
Q Consensus       454 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~k  529 (706)
                         +....++||||++ |+|.+++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++ +++.+|
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEE
Confidence               3467899999998 699999843    34889999999999999999999998   99999999999997 567999


Q ss_pred             EeeeccccccCCCCC-cccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH
Q 005236          530 ISDFGLARAFGGDET-EGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       530 l~Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~  607 (706)
                      |+|||+++....... ........+|..|+|||.+.. ..++.++||||||+++|||++|+.||......   .......
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~~~  238 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL---EQMQLIL  238 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH---HHHHHHH
Confidence            999999987643221 122334567999999998865 68899999999999999999999998643321   1111111


Q ss_pred             HHhhcC----------CCcccccccc-cCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          608 KLWNEG----------MPSQLIDACF-KDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       608 ~~~~~~----------~~~~~~d~~~-~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ......          .....+.... .......     ....+.+++.+||+.||.+|||++|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            110000          0000000000 0000000     1234678999999999999999999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.6e-37  Score=326.73  Aligned_cols=251  Identities=24%  Similarity=0.318  Sum_probs=193.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--------hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--------EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  456 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++....        ......+.+|+.++++++||||+++++++....
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            468999999999999999999985 47899999986432        122345889999999999999999999987654


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC---eEEeee
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDF  533 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~---~kl~Df  533 (706)
                       .++||||+++++|.+++...   ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.   +||+||
T Consensus        89 -~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Df  161 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDF  161 (322)
T ss_dssp             -EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred             -eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccC
Confidence             89999999999999988543   45889999999999999999999988   999999999999987665   999999


Q ss_pred             ccccccCCCCCcccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      |+++......   ......||+.|+|||++.   ...++.++||||||+++|||++|+.||........  ......   
T Consensus       162 g~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~---  233 (322)
T 2ycf_A          162 GHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQIT---  233 (322)
T ss_dssp             TTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHHHH---
T ss_pred             ccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHHHH---
Confidence            9998764221   123356899999999974   56789999999999999999999999865433222  111111   


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ..... .... .....    ...+.+++.+||+.||.+||++.|+++
T Consensus       234 -~~~~~-~~~~-~~~~~----~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          234 -SGKYN-FIPE-VWAEV----SEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             -HTCCC-CCHH-HHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -hCccc-cCch-hhhhc----CHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence             11110 0000 00111    124668899999999999999999974

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=4e-38  Score=335.03  Aligned_cols=258  Identities=22%  Similarity=0.321  Sum_probs=202.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhh-----------------HHHHHHHHHHHhhcCCcceeee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQG-----------------LKELKNEIILFSKLQHRNLVKL  448 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l  448 (706)
                      .++|++.+.||+|+||.||+|+. +++.||||++.......                 .+.+.+|+.++++++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            47899999999999999999999 89999999986432211                 2789999999999999999999


Q ss_pred             EeEEEeCCeeEEEEecCCCCChhhh------hhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecccCCCcEE
Q 005236          449 LGCCIHGEEKLLIYEFMPNKSLDSF------IFDQERCKLLDWSKRFHIICGTARGLLYLHQ-DSRLRIIHRDLKASNVL  521 (706)
Q Consensus       449 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dikp~Nil  521 (706)
                      ++++.+.+..++||||+++++|.++      +... ....+++..++.++.||+.||.|||+ .+   |+||||||+||+
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil  184 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNIL  184 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEE
Confidence            9999999999999999999999998      4321 24568999999999999999999998 77   999999999999


Q ss_pred             EcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccC-CCCc-chhhHHHHHHHHHHHhCCCCCCCCCCCCc
Q 005236          522 LDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSV-KSDVFSFGILLLEIVSGKKNRGFYHSDNK  599 (706)
Q Consensus       522 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~-~sDv~SlGvil~elltG~~p~~~~~~~~~  599 (706)
                      ++.++.+||+|||++......    ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||......  
T Consensus       185 ~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--  258 (348)
T 2pml_X          185 MDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--  258 (348)
T ss_dssp             ECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--
T ss_pred             EcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--
Confidence            999999999999999876432    23345789999999999887 6766 999999999999999999998643321  


Q ss_pred             hhHHHHHHHHhhcCCCcc------cccccccC---cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          600 LNLIRHAWKLWNEGMPSQ------LIDACFKD---SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       600 ~~~~~~~~~~~~~~~~~~------~~d~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ......    +.......      ........   .........+.+++.+||+.||.+|||++|+++
T Consensus       259 ~~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          259 VELFNN----IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHHHHH----HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHH----HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            111111    11111100      00000000   000011235668999999999999999999987

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=6.4e-38  Score=341.74  Aligned_cols=259  Identities=22%  Similarity=0.269  Sum_probs=191.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC------eeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE------EKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~  459 (706)
                      .+|++.+.||+|+||.||+|++. +++.||||++....    ....+|+.++++++|||||++++++....      ..+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            46899999999999999999985 58999999985432    22347999999999999999999986421      357


Q ss_pred             EEEecCCCCChhhhhhcc-cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-CCeEEeeecccc
Q 005236          460 LIYEFMPNKSLDSFIFDQ-ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLAR  537 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-~~~kl~Dfgla~  537 (706)
                      +||||+++ +|.+.+... .....+++..+..++.||++||+|||+.+   |+||||||+||||+.+ +.+||+|||+++
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            89999986 565555432 23356899999999999999999999988   9999999999999965 568999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC---
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG---  613 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---  613 (706)
                      .+.....   .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.....   ...+..........   
T Consensus       206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~---~~~l~~i~~~lg~p~~~  279 (420)
T 1j1b_A          206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG---VDQLVEIIKVLGTPTRE  279 (420)
T ss_dssp             ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHHHCSCCHH
T ss_pred             hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCCHH
Confidence            7643221   2235789999999999765 799999999999999999999999864322   22222222111110   


Q ss_pred             -------CCccccccc-----ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 -------MPSQLIDAC-----FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 -------~~~~~~d~~-----~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                             ...++.-+.     +...+.......+.+|+.+||+.||.+|||+.|+++.
T Consensus       280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence                   001110000     0000011112356789999999999999999999853

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=4e-38  Score=336.66  Aligned_cols=269  Identities=20%  Similarity=0.238  Sum_probs=188.7

Q ss_pred             HHHHHhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe-
Q 005236          380 ATIANATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE-  457 (706)
Q Consensus       380 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-  457 (706)
                      .......++|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+|+..+..++||||+++++++..... 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            344566789999999999999999999985 58899999885432 233456778888999999999999999976443 


Q ss_pred             ------eEEEEecCCCCChhhhhh-cccccCCCCHHHHHHHHHHHHHHHHHHH--hCCCCceEecccCCCcEEEcC-CCC
Q 005236          458 ------KLLIYEFMPNKSLDSFIF-DQERCKLLDWSKRFHIICGTARGLLYLH--QDSRLRIIHRDLKASNVLLDQ-DMN  527 (706)
Q Consensus       458 ------~~lV~e~~~~gsL~~~l~-~~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~Dikp~Nill~~-~~~  527 (706)
                            .++||||++++ |...+. .......+++..+..++.|++.||.|||  +.+   |+||||||+||||+. ++.
T Consensus        95 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~  170 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGT  170 (360)
T ss_dssp             CTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTE
T ss_pred             cccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCc
Confidence                  78999999874 444333 2234456889999999999999999999  777   999999999999997 899


Q ss_pred             eEEeeeccccccCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHH
Q 005236          528 PKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA  606 (706)
Q Consensus       528 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~  606 (706)
                      +||+|||+++.+.....   .....||+.|+|||++.+. .++.++||||||+++|||++|+.||......   ......
T Consensus       171 ~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~~~  244 (360)
T 3e3p_A          171 LKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA---GQLHEI  244 (360)
T ss_dssp             EEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHH
T ss_pred             EEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH---HHHHHH
Confidence            99999999987643322   2235689999999998665 4899999999999999999999998643322   222222


Q ss_pred             HHHhhcCC-----------C-ccccc------ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          607 WKLWNEGM-----------P-SQLID------ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       607 ~~~~~~~~-----------~-~~~~d------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ........           . ....+      ..............+.+++.+||+.||.+|||+.|+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            21111100           0 00000      000001111123467789999999999999999999864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=5.9e-38  Score=329.49  Aligned_cols=258  Identities=28%  Similarity=0.422  Sum_probs=198.3

Q ss_pred             hccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ..++|++.+.||+|+||.||+|+..+  .+|+|++...  .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~  108 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT  108 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence            35789999999999999999999854  4999998643  2333456788999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++...  ...+++..++.++.||+.||+|||+.+   |+||||||+|||++ ++.+||+|||+++.....
T Consensus       109 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~  182 (319)
T 2y4i_B          109 SLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL  182 (319)
T ss_dssp             BCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred             ecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence            999999999999653  245889999999999999999999998   99999999999998 689999999998765322


Q ss_pred             CC---cccccccccccCccCcccccc---------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          543 ET---EGNTNRVVGTYGYMAPEYASD---------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       543 ~~---~~~~~~~~gt~~y~aPE~~~~---------~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      ..   ........|++.|+|||++..         ..++.++||||||+++|||++|+.||.....   .....   .. 
T Consensus       183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~---~~-  255 (319)
T 2y4i_B          183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA---EAIIW---QM-  255 (319)
T ss_dssp             -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH---HHHHH---HH-
T ss_pred             cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHH---Hh-
Confidence            11   122233568999999999874         4578999999999999999999999754321   11111   11 


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      ...........    ..+    ..+.+++..||+.+|.+|||+.+|+++|+.+..
T Consensus       256 ~~~~~~~~~~~----~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~  302 (319)
T 2y4i_B          256 GTGMKPNLSQI----GMG----KEISDILLFCWAFEQEERPTFTKLMDMLEKLPK  302 (319)
T ss_dssp             HTTCCCCCCCS----SCC----TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred             ccCCCCCCCcC----CCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            11111111110    011    135578889999999999999999999998743

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=7.4e-37  Score=328.47  Aligned_cols=266  Identities=22%  Similarity=0.308  Sum_probs=201.1

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-----------CcceeeeEeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-----------HRNLVKLLGCCI  453 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~  453 (706)
                      .++|++.+.||+|+||.||+|+. .+++.||||++.. .....+.+.+|+.++++++           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC-CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            36899999999999999999997 4688999999864 3344567889999998886           899999999998


Q ss_pred             eCC----eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEc-----
Q 005236          454 HGE----EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLD-----  523 (706)
Q Consensus       454 ~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~-----  523 (706)
                      ...    ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++ +   |+||||||+||||+     
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCC
Confidence            654    789999999 9999999965432 3488999999999999999999997 7   99999999999994     


Q ss_pred             -CCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc---
Q 005236          524 -QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK---  599 (706)
Q Consensus       524 -~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~---  599 (706)
                       ..+.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||........   
T Consensus       172 ~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  246 (373)
T 1q8y_A          172 ENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD  246 (373)
T ss_dssp             TTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred             cCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence             4458999999999875322     2235789999999999999999999999999999999999999875433221   


Q ss_pred             hhHHHHHHHHhhcCCCcccc----------------c-----------ccc--cCcCCHHHHHHHHHHHHHhcCCCCCCC
Q 005236          600 LNLIRHAWKLWNEGMPSQLI----------------D-----------ACF--KDSFNLAEVIRCIHIGLLCVQQYPEDR  650 (706)
Q Consensus       600 ~~~~~~~~~~~~~~~~~~~~----------------d-----------~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~R  650 (706)
                      ...+......... .+..+.                .           ..+  ...........+.+++..||+.||.+|
T Consensus       247 ~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  325 (373)
T 1q8y_A          247 DDHIAQIIELLGE-LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR  325 (373)
T ss_dssp             HHHHHHHHHHHCS-CCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred             HHHHHHHHHhcCC-CCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence            1112121111111 000000                0           000  012234455677899999999999999


Q ss_pred             CChhHHHH--HhcCC
Q 005236          651 PCMPSVIL--MLGSE  663 (706)
Q Consensus       651 Pt~~ev~~--~L~~~  663 (706)
                      ||++||++  .+.+.
T Consensus       326 pt~~ell~hp~f~~~  340 (373)
T 1q8y_A          326 ADAGGLVNHPWLKDT  340 (373)
T ss_dssp             BCHHHHHTCGGGTTC
T ss_pred             CCHHHHhhChhhhcc
Confidence            99999987  34443

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.3e-37  Score=354.59  Aligned_cols=257  Identities=23%  Similarity=0.324  Sum_probs=202.0

Q ss_pred             HhccCCCccceeccCCceeEEEEEeCC----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      ...++|++.+.||+|+||.||+|++..    +..||||++... .....+.+.+|+.++++++||||+++++++. .+..
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~  465 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV  465 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence            345789999999999999999998743    457999998653 4445678999999999999999999999984 5678


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++|+|.+++...  ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus       466 ~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~  540 (656)
T 2j0j_A          466 WIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY  540 (656)
T ss_dssp             EEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred             EEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCee
Confidence            9999999999999999643  235889999999999999999999988   99999999999999999999999999987


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ...... .......+|+.|+|||++.+..++.++||||||+++|||++ |..||.....   ........    ......
T Consensus       541 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~---~~~~~~i~----~~~~~~  612 (656)
T 2j0j_A          541 MEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---NDVIGRIE----NGERLP  612 (656)
T ss_dssp             CCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHHH----HTCCCC
T ss_pred             cCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHH----cCCCCC
Confidence            643322 12223456789999999999999999999999999999997 8988754322   12222211    111111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      +..     ..    ...+.+++.+||+.||.+|||+.||++.|+.+
T Consensus       613 ~~~-----~~----~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          613 MPP-----NC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             CCT-----TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCc-----cc----cHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            111     11    12466789999999999999999999999864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1e-36  Score=328.41  Aligned_cols=202  Identities=23%  Similarity=0.352  Sum_probs=171.1

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-Cc-----ceeeeEeEEEeCC
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HR-----NLVKLLGCCIHGE  456 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~  456 (706)
                      ...++|++.++||+|+||.||+|+.. +++.||||++... ....+++..|+.++..++ |+     +|+++++++...+
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            34579999999999999999999985 5788999999643 344567788998888885 44     4999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc--CCCCeEEeeec
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD--QDMNPKISDFG  534 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~--~~~~~kl~Dfg  534 (706)
                      ..++||||++ ++|.+++.... ...+++..+..++.||+.||.|||++ ..+|+||||||+||||+  .++.+||+|||
T Consensus       130 ~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG  206 (382)
T 2vx3_A          130 HLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG  206 (382)
T ss_dssp             EEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred             ceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence            9999999996 59999986543 24589999999999999999999953 12499999999999995  57889999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFY  594 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~  594 (706)
                      +++.....     .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       207 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          207 SSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             TCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             Cceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99876432     22357899999999999999999999999999999999999998643

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.4e-37  Score=321.53  Aligned_cols=252  Identities=25%  Similarity=0.361  Sum_probs=200.4

Q ss_pred             HhccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          384 NATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       384 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ...++|++.+.||+|+||.||+|+.. +++.||||++...  .....+.+.+|+.++++++||||+++++++.+....++
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            34578999999999999999999985 6889999998543  23456789999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC---CCeEEeeecccc
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD---MNPKISDFGLAR  537 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~---~~~kl~Dfgla~  537 (706)
                      ||||+++++|.+++...   ..+++..++.++.||+.||.|||+.+   ++|+||||+||+++.+   +.+||+|||++.
T Consensus        99 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A           99 VGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             EEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            99999999999988654   34889999999999999999999988   9999999999999764   469999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ......   ......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||.....   ......    +..+....
T Consensus       173 ~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~----~~~~~~~~  241 (287)
T 2wei_A          173 CFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE---YDILKR----VETGKYAF  241 (287)
T ss_dssp             TBCCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHH----HHHCCCCC
T ss_pred             eecCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH---HHHHHH----HHcCCCCC
Confidence            764322   2223468999999999865 489999999999999999999999754321   111111    11111110


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ... .. ...+    ..+.+++.+||+.+|.+|||+.|+++
T Consensus       242 ~~~-~~-~~~~----~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          242 DLP-QW-RTIS----DDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             CSG-GG-TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             Cch-hh-hhcC----HHHHHHHHHHcccChhhCcCHHHHhc
Confidence            000 00 0111    24567899999999999999999987

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.1e-37  Score=328.41  Aligned_cols=262  Identities=22%  Similarity=0.320  Sum_probs=197.3

Q ss_pred             hccCCCccceeccCCceeEEEEEe--CCCcEEEEEEcCccc--hhhHHHHHHHHHHHhhc---CCcceeeeEeEEE----
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTL--ADEQEIAVKRLSKIS--EQGLKELKNEIILFSKL---QHRNLVKLLGCCI----  453 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~----  453 (706)
                      ..++|++.+.||+|+||.||+|+.  .+++.||||++....  ......+.+|+.+++.+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457899999999999999999998  457889999986432  12223556777777666   8999999999987    


Q ss_pred             -eCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          454 -HGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       454 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                       .....++||||++ |+|.+++..... ..+++..+..++.||+.||.|||+.+   |+||||||+||+++.++.+||+|
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~D  163 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLAD  163 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECS
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEec
Confidence             4567899999998 699999865432 34889999999999999999999998   99999999999999999999999


Q ss_pred             eccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE  612 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~  612 (706)
                      ||+++.....   .......||+.|+|||++.+..++.++||||||+++|||++|+.||.....   .............
T Consensus       164 fg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~  237 (326)
T 1blx_A          164 FGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD---VDQLGKILDVIGL  237 (326)
T ss_dssp             CCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCC
T ss_pred             CcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHHHcCC
Confidence            9999865322   122345789999999999999999999999999999999999999764332   2222222221111


Q ss_pred             CCCccc----------cc----ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          613 GMPSQL----------ID----ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       613 ~~~~~~----------~d----~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ......          ..    ..+. .........+.+++.+||+.||.+|||+.|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          238 PGEEDWPRDVALPRQAFHSKSAQPIE-KFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGG-GTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCcccCccccccchhhhcccCcchhh-hccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            100000          00    0000 000011124567899999999999999999985

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=3.6e-37  Score=334.70  Aligned_cols=267  Identities=21%  Similarity=0.328  Sum_probs=183.4

Q ss_pred             cCCCc-cceeccCCceeEEEEEeC---CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe--CCeeEE
Q 005236          387 DNFSI-NKKLGEGGFGPVYKGTLA---DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH--GEEKLL  460 (706)
Q Consensus       387 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l  460 (706)
                      +.|.+ .++||+|+||.||+|+..   +++.||||++.....  .+.+.+|+.++++++||||+++++++..  ....++
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            34555 468999999999999975   478899999965322  2467899999999999999999999965  568899


Q ss_pred             EEecCCCCChhhhhhccc------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE----cCCCCeEE
Q 005236          461 IYEFMPNKSLDSFIFDQE------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL----DQDMNPKI  530 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill----~~~~~~kl  530 (706)
                      ||||+++ +|.+++....      ....+++..++.++.||+.||+|||+.+   |+||||||+||||    +.++.+||
T Consensus        98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A           98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEE
Confidence            9999974 7877775322      1234899999999999999999999998   9999999999999    77899999


Q ss_pred             eeeccccccCCCCC-cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC------chhH
Q 005236          531 SDFGLARAFGGDET-EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN------KLNL  602 (706)
Q Consensus       531 ~Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~------~~~~  602 (706)
                      +|||+++.+..... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||.....+.      ....
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  253 (405)
T 3rgf_A          174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ  253 (405)
T ss_dssp             CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred             EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence            99999987643221 1223346789999999999874 58999999999999999999999986433211      1122


Q ss_pred             HHHHHHHhhcCCCc---ccc---------ccccc---CcCCHHH---------HHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          603 IRHAWKLWNEGMPS---QLI---------DACFK---DSFNLAE---------VIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       603 ~~~~~~~~~~~~~~---~~~---------d~~~~---~~~~~~~---------~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +.............   .+.         .....   .......         ...+.+|+..||+.||.+|||++|+++
T Consensus       254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            22222222111110   000         00000   0000000         124678999999999999999999987


Q ss_pred             H
Q 005236          659 M  659 (706)
Q Consensus       659 ~  659 (706)
                      .
T Consensus       334 h  334 (405)
T 3rgf_A          334 D  334 (405)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=2.4e-37  Score=329.66  Aligned_cols=262  Identities=23%  Similarity=0.296  Sum_probs=197.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-----Cee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-----EEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  458 (706)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++... .......+.+|+.++++++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            478999999999999999999985 5889999998653 344566788999999999999999999998764     678


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||++ ++|.+++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.
T Consensus        90 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccccc
Confidence            99999997 589988854    35899999999999999999999988   99999999999999999999999999987


Q ss_pred             cCCCCCcc--------cccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHH
Q 005236          539 FGGDETEG--------NTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL  609 (706)
Q Consensus       539 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~  609 (706)
                      +.......        ......||+.|+|||++.. ..++.++||||||+++|||++|+.||......   .........
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~  238 (353)
T 2b9h_A          162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR---HQLLLIFGI  238 (353)
T ss_dssp             CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHH
T ss_pred             cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHHH
Confidence            64322111        1223468999999998765 78999999999999999999999998643321   111111111


Q ss_pred             hhcCCCcc----cccc--------ccc-CcCCH-----HHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          610 WNEGMPSQ----LIDA--------CFK-DSFNL-----AEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       610 ~~~~~~~~----~~d~--------~~~-~~~~~-----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ........    +...        ... .....     .....+.+++.+||+.||.+|||++|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            11110000    0000        000 00000     01124668999999999999999999987

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=4.8e-37  Score=319.68  Aligned_cols=253  Identities=25%  Similarity=0.411  Sum_probs=190.6

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe----------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH----------  454 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------  454 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.. .....+.+.+|+.++++++||||+++++++.+          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            467999999999999999999974 688999999854 34456789999999999999999999999865          


Q ss_pred             ---CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEe
Q 005236          455 ---GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKIS  531 (706)
Q Consensus       455 ---~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~  531 (706)
                         ....++||||+++++|.+++....  ..+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEEC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEe
Confidence               356789999999999999996532  34678889999999999999999998   9999999999999999999999


Q ss_pred             eeccccccCCCCC------------cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 005236          532 DFGLARAFGGDET------------EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN  598 (706)
Q Consensus       532 Dfgla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~  598 (706)
                      |||+++.......            ........||+.|+|||++.+. .++.++||||||+++|||++   |+..  .  
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~--~--  231 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST--G--  231 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS--H--
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC--c--
Confidence            9999987643210            1122345689999999999865 78999999999999999998   3321  1  


Q ss_pred             chhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       .... ........... .+ .+    .........+.+++.+||+.||.+|||+.++++.
T Consensus       232 -~~~~-~~~~~~~~~~~-~~-~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          232 -MERV-NILKKLRSVSI-EF-PP----DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             -HHHH-HHHHHHHSTTC-CC-CT----TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             -hhHH-HHHHhcccccc-cc-Cc----cccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence             1111 11111111111 00 01    1111122345678999999999999999999874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3.7e-37  Score=325.85  Aligned_cols=258  Identities=20%  Similarity=0.255  Sum_probs=173.2

Q ss_pred             hccCCCccc-eeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe----CCee
Q 005236          385 ATDNFSINK-KLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH----GEEK  458 (706)
Q Consensus       385 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~  458 (706)
                      ..++|.+.+ .||+|+||.||+|+.. +++.||||++.... .   ...+....++.++||||+++++++..    ....
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-K---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-H---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-H---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            346888855 6999999999999986 58899999985422 1   22223334667799999999999976    4458


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC---CCCeEEeeecc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---DMNPKISDFGL  535 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl~Dfgl  535 (706)
                      ++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||+
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecccc
Confidence            99999999999999997543 246899999999999999999999998   999999999999986   45599999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      ++.....    ......+|+.|+|||++....++.++||||||+++|||++|+.||........................
T Consensus       178 ~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  253 (336)
T 3fhr_A          178 AKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFP  253 (336)
T ss_dssp             CEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCC
T ss_pred             ceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccC
Confidence            9865322    223356899999999999889999999999999999999999998643332211110000000000000


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH--HhcCC
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL--MLGSE  663 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~--~L~~~  663 (706)
                          .+.. ...    ...+.+++..||+.||.+|||++|+++  .+...
T Consensus       254 ----~~~~-~~~----~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          254 ----NPEW-SEV----SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             ----TTTS-TTC----CHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             ----chhh-ccC----CHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence                0000 011    124567899999999999999999997  44443

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=8.7e-38  Score=335.37  Aligned_cols=256  Identities=22%  Similarity=0.328  Sum_probs=195.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee----
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK----  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----  458 (706)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++...  .....+.+.+|+.+++.++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            468999999999999999999975 5889999998653  444567889999999999999999999999877655    


Q ss_pred             --EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          459 --LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       459 --~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                        ++||||++ ++|.+++.     ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       121 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a  191 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA  191 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred             eEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCcc
Confidence              99999998 68887772     23889999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      +.....     .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||.....   .............. .
T Consensus       192 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~-~  262 (371)
T 4exu_A          192 RHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY---LDQLTQILKVTGVP-G  262 (371)
T ss_dssp             -------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCC-C
T ss_pred             cccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCC-c
Confidence            865322     233568999999999987 7899999999999999999999999854322   12222211111100 0


Q ss_pred             cccccc------------ccc-CcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 SQLIDA------------CFK-DSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ~~~~d~------------~~~-~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .+....            ... ......     ....+.+++..||+.||.+|||++|+++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            000000            000 000000     12356789999999999999999999864

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=3e-37  Score=329.04  Aligned_cols=256  Identities=23%  Similarity=0.316  Sum_probs=194.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe-----
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE-----  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  457 (706)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++...  .....+.+.+|+.++++++||||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            368999999999999999999984 5889999998653  34446788999999999999999999999987654     


Q ss_pred             -eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          458 -KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       458 -~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                       .++||||++ ++|.+++.     ..+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||++
T Consensus       103 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~  173 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA  173 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred             eEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccc
Confidence             499999998 58888773     23889999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      +.....     .....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||.....   ................
T Consensus       174 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~~~  245 (353)
T 3coi_A          174 RHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY---LDQLTQILKVTGVPGT  245 (353)
T ss_dssp             TC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH---HHHHHHHHHHHCBCCH
T ss_pred             cCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCCH
Confidence            865322     223578999999999877 6889999999999999999999999864332   1222211111100000


Q ss_pred             ------------------cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 ------------------SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ------------------~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                                        .......+.. ........+.+++.+||+.||.+|||++|+++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHHTTCSCHHHHHHHHTSCBCSSCCTTT-TCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHhhHHHHHHHHhCcCCCCccHHH-hcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                              0000000000 000112356788999999999999999999863

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=9.6e-37  Score=325.04  Aligned_cols=258  Identities=20%  Similarity=0.293  Sum_probs=198.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-C-cEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc------eeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-E-QEIAVKRLSKISEQGLKELKNEIILFSKLQHRN------LVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~  457 (706)
                      .++|++.+.||+|+||.||+|+... + +.||||++... ....+.+.+|+.++++++|++      ++.+++++.....
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            4789999999999999999999743 3 68999998643 344577889999999998766      9999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE---------------
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL---------------  522 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill---------------  522 (706)
                      .++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+.+   |+||||||+|||+               
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~  171 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSC  171 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred             EEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccc
Confidence            99999999 667777665432 245899999999999999999999987   9999999999999               


Q ss_pred             ----cCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 005236          523 ----DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN  598 (706)
Q Consensus       523 ----~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~  598 (706)
                          +.++.+||+|||+++.....     .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+
T Consensus       172 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  246 (355)
T 2eu9_A          172 EEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE  246 (355)
T ss_dssp             CEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             cccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                67889999999999864322     223578999999999999999999999999999999999999986433222


Q ss_pred             chhHHHHHHHHhhcCCCcccccc------------cc-------------------cCcCCHHHHHHHHHHHHHhcCCCC
Q 005236          599 KLNLIRHAWKLWNEGMPSQLIDA------------CF-------------------KDSFNLAEVIRCIHIGLLCVQQYP  647 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~d~------------~~-------------------~~~~~~~~~~~~~~l~~~cl~~~p  647 (706)
                         ......... ...+......            .+                   ...........+.+++.+||+.||
T Consensus       247 ---~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  322 (355)
T 2eu9_A          247 ---HLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP  322 (355)
T ss_dssp             ---HHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred             ---HHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence               111111111 1111100000            00                   001112234467789999999999


Q ss_pred             CCCCChhHHHH
Q 005236          648 EDRPCMPSVIL  658 (706)
Q Consensus       648 ~~RPt~~ev~~  658 (706)
                      .+|||+.|+++
T Consensus       323 ~~Rpt~~e~l~  333 (355)
T 2eu9_A          323 AQRITLAEALL  333 (355)
T ss_dssp             TTSCCHHHHTT
T ss_pred             hhCcCHHHHhc
Confidence            99999999974

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=4.7e-37  Score=323.94  Aligned_cols=255  Identities=27%  Similarity=0.373  Sum_probs=177.0

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHH-HHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEII-LFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++... .......+..|+. +++.++||||+++++++.+.+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            378999999999999999999985 6889999998653 3334455566665 778889999999999999999999999


Q ss_pred             ecCCCCChhhhhhcc--cccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          463 EFMPNKSLDSFIFDQ--ERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       463 e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      ||+++ +|.+++...  .....+++..+..++.|++.||.|||+. +   |+||||||+|||++.++.+||+|||+++.+
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99985 887777532  1235688999999999999999999998 7   999999999999999999999999999876


Q ss_pred             CCCCCcccccccccccCccCcccc----ccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYA----SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      ....   ......||+.|+|||++    .+..++.++||||||+++|||++|+.||.......     ..... ......
T Consensus       177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~-~~~~~~  247 (327)
T 3aln_A          177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----DQLTQ-VVKGDP  247 (327)
T ss_dssp             --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CC-CCCSCC
T ss_pred             cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----HHHHH-HhcCCC
Confidence            4322   12234689999999998    45678999999999999999999999986432110     00000 011111


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..+... .....    ...+.+++.+||+.||.+|||+.||++
T Consensus       248 ~~~~~~-~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          248 PQLSNS-EEREF----SPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCCCC-SSCCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCc-ccccC----CHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            111110 00111    124667899999999999999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.2e-36  Score=333.14  Aligned_cols=253  Identities=24%  Similarity=0.282  Sum_probs=185.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      +.|.+.+.||+|+||+||.+...+|+.||||++...   ..+.+.+|+.++.++ +||||+++++++.+....++||||+
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            345567889999999998776678999999998543   245678899999886 8999999999999999999999999


Q ss_pred             CCCChhhhhhcccccC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC-------------CCe
Q 005236          466 PNKSLDSFIFDQERCK----LLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD-------------MNP  528 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~----~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~-------------~~~  528 (706)
                      + |+|.+++.......    ...+..++.++.||+.||+|||+.+   |+||||||+||||+.+             +.+
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEE
Confidence            6 69999997543221    1233456789999999999999988   9999999999999754             489


Q ss_pred             EEeeeccccccCCCCCcc--cccccccccCccCcccccc-------CCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCC
Q 005236          529 KISDFGLARAFGGDETEG--NTNRVVGTYGYMAPEYASD-------GQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDN  598 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~  598 (706)
                      ||+|||+++.+.......  ......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||...... 
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-  246 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-  246 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-
Confidence            999999999875433221  2234579999999999976       678999999999999999999 89997532211 


Q ss_pred             chhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                         .........   .....     ...........+.+++.+||+.||.+|||+.||++
T Consensus       247 ---~~~i~~~~~---~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          247 ---ESNIIRGIF---SLDEM-----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             ---HHHHHHTCC---CCCCC-----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---HHHHhcCCC---Ccccc-----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence               111111110   11110     11112233456778999999999999999999985

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.7e-36  Score=317.36  Aligned_cols=245  Identities=24%  Similarity=0.389  Sum_probs=188.8

Q ss_pred             HHHhccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccch------hhHHHHHHHHHHHhhc----CCcceeeeEe
Q 005236          382 IANATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISE------QGLKELKNEIILFSKL----QHRNLVKLLG  450 (706)
Q Consensus       382 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~~  450 (706)
                      .....++|++.+.||+|+||.||+|+. .+++.||||++.....      .....+.+|+.++.++    +||||+++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            344567899999999999999999987 4588999999865322      1233466799999998    8999999999


Q ss_pred             EEEeCCeeEEEEec-CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-CCCCe
Q 005236          451 CCIHGEEKLLIYEF-MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNP  528 (706)
Q Consensus       451 ~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~  528 (706)
                      ++...+..++|||| +.+++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+||+++ +++.+
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~  179 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCA  179 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEE
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeE
Confidence            99999999999999 8999999999653   34899999999999999999999998   99999999999999 88999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFS-VKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+|||+++......    .....|+..|+|||++.+..+. .++||||||+++|||++|+.||...      ..+    
T Consensus       180 kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~----  245 (312)
T 2iwi_A          180 KLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEI----  245 (312)
T ss_dssp             EECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHH----
T ss_pred             EEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh------HHH----
Confidence            999999998764322    2335689999999999877764 5899999999999999999997531      000    


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                        ... .. .+     ....+    ..+.+++.+||+.+|++|||++|+++.
T Consensus       246 --~~~-~~-~~-----~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          246 --LEA-EL-HF-----PAHVS----PDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             --HHT-CC-CC-----CTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             --hhh-cc-CC-----cccCC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              000 00 00     01111    245678999999999999999999974

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=2.4e-36  Score=317.04  Aligned_cols=251  Identities=22%  Similarity=0.359  Sum_probs=177.4

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      .++|++.+.||+|+||.||+|+.. +++.||||++....  ....+.+.++..+++.++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            368999999999999999999985 68899999986532  222344555556788889999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      ||+ ++.+..++...  ...+++..+..++.||+.||.|||+. +   |+||||||+|||++.++.+||+|||++..+..
T Consensus       104 e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A          104 ELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             CCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             ecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence            999 44555544322  24588999999999999999999985 7   99999999999999999999999999976543


Q ss_pred             CCCcccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      ..   ......||+.|+|||++.     ...++.++||||||+++|||++|+.||.....  .......   ...... .
T Consensus       178 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~---~~~~~~-~  248 (318)
T 2dyl_A          178 DK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT--DFEVLTK---VLQEEP-P  248 (318)
T ss_dssp             ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS--HHHHHHH---HHHSCC-C
T ss_pred             Cc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc--cHHHHHH---HhccCC-C
Confidence            22   222356899999999994     55788999999999999999999999754221  1122211   111111 1


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .+...   ...+    ..+.+++.+||+.||.+||+++|+++
T Consensus       249 ~~~~~---~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          249 LLPGH---MGFS----GDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CCCSS---SCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCcc---CCCC----HHHHHHHHHHccCChhHCcCHHHHhh
Confidence            11000   0111    24567889999999999999999975

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=5.7e-37  Score=322.23  Aligned_cols=244  Identities=24%  Similarity=0.381  Sum_probs=196.8

Q ss_pred             HHhccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccch------hhHHHHHHHHHHHhhcC--CcceeeeEeEEE
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISE------QGLKELKNEIILFSKLQ--HRNLVKLLGCCI  453 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~l~~~~~  453 (706)
                      ....++|++.+.||+|+||.||+|+. .+++.||||++.....      ...+.+.+|+.++++++  ||||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            34557899999999999999999987 4588999999865321      12245678999999996  599999999999


Q ss_pred             eCCeeEEEEecCCC-CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-CCCCeEEe
Q 005236          454 HGEEKLLIYEFMPN-KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPKIS  531 (706)
Q Consensus       454 ~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~kl~  531 (706)
                      +.+..++|||++.+ ++|.+++...   ..+++..++.++.||+.||+|||+.+   |+||||||+|||++ +++.+||+
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~  192 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLI  192 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEEC
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEe
Confidence            99999999999986 8999999653   35889999999999999999999988   99999999999999 78999999


Q ss_pred             eeccccccCCCCCcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHh
Q 005236          532 DFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLW  610 (706)
Q Consensus       532 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~  610 (706)
                      |||+++.....    ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||....      .      ..
T Consensus       193 Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~------~~  256 (320)
T 3a99_A          193 DFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------E------II  256 (320)
T ss_dssp             CCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------H------HH
T ss_pred             eCccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------h------hh
Confidence            99999876432    1223568999999999987776 688999999999999999999975311      0      01


Q ss_pred             hcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          611 NEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       611 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .....       .....+    ..+.+++.+||+.||.+|||++||++.
T Consensus       257 ~~~~~-------~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          257 RGQVF-------FRQRVS----SECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             HCCCC-------CSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ccccc-------ccccCC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            11100       001111    245678999999999999999999873

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.9e-36  Score=326.79  Aligned_cols=249  Identities=22%  Similarity=0.306  Sum_probs=184.3

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      .+|.+.++||+|+||+||.....+++.||||++.....   ..+.+|+.+++++ +|||||++++++.+....++||||+
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~  100 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC  100 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence            46889999999999997665566789999999865322   2356799999999 7999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-----CCCeEEeeeccccccC
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-----DMNPKISDFGLARAFG  540 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-----~~~~kl~Dfgla~~~~  540 (706)
                      + |+|.+++.....  ......++.++.||+.||+|||+.+   |+||||||+||||+.     ...+||+|||+++.+.
T Consensus       101 ~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~  174 (432)
T 3p23_A          101 A-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA  174 (432)
T ss_dssp             S-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred             C-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence            6 599999965432  2444556789999999999999998   999999999999953     2358899999998764


Q ss_pred             CCCC-cccccccccccCccCccccc---cCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          541 GDET-EGNTNRVVGTYGYMAPEYAS---DGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       541 ~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      .... ........||+.|+|||++.   ...++.++|||||||++|||++ |..||.....    ....   ........
T Consensus       175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~----~~~~---~~~~~~~~  247 (432)
T 3p23_A          175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ----RQAN---ILLGACSL  247 (432)
T ss_dssp             -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT----HHHH---HHTTCCCC
T ss_pred             CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH----HHHH---HHhccCCc
Confidence            3321 12233467999999999997   4577889999999999999999 8888743211    1111   11111111


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ....      ........+.+++.+||+.||.+|||++||++
T Consensus       248 -~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          248 -DCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             -TTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -cccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence             1111      01122334668999999999999999999984

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.1e-36  Score=342.78  Aligned_cols=266  Identities=23%  Similarity=0.299  Sum_probs=196.4

Q ss_pred             hccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEe------CC
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIH------GE  456 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~  456 (706)
                      ..++|++.++||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++..      .+
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            3478999999999999999999984 5889999998653 45556789999999999999999999998765      66


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCC---eEEeee
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMN---PKISDF  533 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~---~kl~Df  533 (706)
                      ..++||||+++|+|.+++........+++..++.++.||+.||+|||+.+   |+||||||+||+++.++.   +||+||
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DF  168 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDL  168 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccc
Confidence            78999999999999999977655556889999999999999999999988   999999999999997765   999999


Q ss_pred             ccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCch-h-H-HHHHHHHh
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKL-N-L-IRHAWKLW  610 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~-~-~-~~~~~~~~  610 (706)
                      |+++......   ......||+.|+|||++.+..++.++||||||+++|||++|+.||......... . . ........
T Consensus       169 G~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~  245 (676)
T 3qa8_A          169 GYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV  245 (676)
T ss_dssp             CCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CC
T ss_pred             cccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhh
Confidence            9998764332   223457899999999999999999999999999999999999998532110000 0 0 00000000


Q ss_pred             hcCCCcc--cccccc--cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHH
Q 005236          611 NEGMPSQ--LIDACF--KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSV  656 (706)
Q Consensus       611 ~~~~~~~--~~d~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev  656 (706)
                      .......  .....+  ...........+.+++..||+.||++|||++|+
T Consensus       246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            0000000  000000  011122234467789999999999999999773

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1e-35  Score=344.28  Aligned_cols=237  Identities=19%  Similarity=0.294  Sum_probs=190.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC--CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCe-----e
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA--DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEE-----K  458 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~  458 (706)
                      ++|++.++||+|+||.||+|.+.  +++.||||++... .....+.+.+|+.++++++||||+++++++.+.+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            68999999999999999999985  5889999998643 44556788999999999999999999999987665     6


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++++|.+++..     .+++..++.++.||+.||.|||+++   |+||||||+||||+.+ .+||+|||+++.
T Consensus       160 ~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             EEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchh
Confidence            999999999999987743     5899999999999999999999998   9999999999999986 999999999987


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      ....      ....||+.|+|||++.+.. +.++||||||+++|||++|..|+.......               ...  
T Consensus       231 ~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~---------------~~~--  286 (681)
T 2pzi_A          231 INSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG---------------LPE--  286 (681)
T ss_dssp             TTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS---------------CCT--
T ss_pred             cccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc---------------ccc--
Confidence            6432      3357999999999987654 899999999999999999988764311110               000  


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-hhHHHHHhcC
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-MPSVILMLGS  662 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-~~ev~~~L~~  662 (706)
                            ..........+.+++.+||+.||.+||+ ++++...|..
T Consensus       287 ------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          287 ------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             ------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence                  0000111235667999999999999995 5556555543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.5e-34  Score=298.37  Aligned_cols=230  Identities=11%  Similarity=0.063  Sum_probs=181.2

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||.||+|+... ++.||||++...   .....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            679999999999999999999854 889999999753   2445678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++++|.+++...     ....++.+++.||+.||+|||+++   |+||||||+||||+.++.+||++++        
T Consensus       111 e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~--------  174 (286)
T 3uqc_A          111 EWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA--------  174 (286)
T ss_dssp             ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred             EecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc--------
Confidence            999999999999432     355578889999999999999998   9999999999999999999997443        


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                                    |++|       ++.++||||||+++|||++|+.||.............   ..... ....  ...
T Consensus       175 --------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~---~~~~~-~~~~--~~~  227 (286)
T 3uqc_A          175 --------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE---RDTAG-QPIE--PAD  227 (286)
T ss_dssp             --------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---BCTTS-CBCC--HHH
T ss_pred             --------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---HHhcc-CCCC--hhh
Confidence                          3333       6889999999999999999999986543322110000   00000 0000  000


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      .....+    ..+.+++.+||+.||.+| |+.|+++.|+...
T Consensus       228 ~~~~~~----~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~  264 (286)
T 3uqc_A          228 IDRDIP----FQISAVAARSVQGDGGIR-SASTLLNLMQQAT  264 (286)
T ss_dssp             HCTTSC----HHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred             cccCCC----HHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence            011111    246678999999999999 9999999998763

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.1e-34  Score=301.60  Aligned_cols=228  Identities=20%  Similarity=0.270  Sum_probs=176.2

Q ss_pred             ccCCCcc-ceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHH-hhcCCcceeeeEeEEEe----CCee
Q 005236          386 TDNFSIN-KKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILF-SKLQHRNLVKLLGCCIH----GEEK  458 (706)
Q Consensus       386 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~  458 (706)
                      .++|.+. +.||+|+||.||+++. .+++.||||++..     ...+.+|+.++ +.++||||+++++++..    ....
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   90 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   90 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence            3577777 7899999999999998 4588999999854     24567788887 56699999999999987    6678


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC---CCCeEEeeecc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---DMNPKISDFGL  535 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl~Dfgl  535 (706)
                      ++||||+++++|.+++.... ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||+
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccc
Confidence            99999999999999997643 245899999999999999999999998   999999999999998   78999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      +....                        +..++.++||||||+++|||++|+.||.........           ....
T Consensus       167 a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----------~~~~  211 (299)
T 3m2w_A          167 AKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----------PGMK  211 (299)
T ss_dssp             CEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSC
T ss_pred             ccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----------HHHH
Confidence            87532                        234678999999999999999999998543221100           0000


Q ss_pred             cccccccccCcCCH----HHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 SQLIDACFKDSFNL----AEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ~~~~d~~~~~~~~~----~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ..+.....  ....    .....+.+++..||+.||.+|||++|+++.
T Consensus       212 ~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          212 TRIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             CSSCTTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHhhccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            00000000  0000    012246678999999999999999999973

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=6.7e-35  Score=317.16  Aligned_cols=241  Identities=16%  Similarity=0.180  Sum_probs=176.6

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCC-cce----------e----
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQH-RNL----------V----  446 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h-~ni----------v----  446 (706)
                      ...|.+.+.||+|+||.||+|++ .+++.||||++...   .....+.+++|+.+++.++| +|.          +    
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            34678889999999999999996 46889999998742   22336789999999999987 221          1    


Q ss_pred             -e------eEeEEEe-----CCeeEEEEecCCCCChhhhhhcc----cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCce
Q 005236          447 -K------LLGCCIH-----GEEKLLIYEFMPNKSLDSFIFDQ----ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRI  510 (706)
Q Consensus       447 -~------l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i  510 (706)
                       .      +..++..     ....+++|+++ +++|.+++...    .....+++..++.++.||++||+|||+++   |
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence             1      1111111     12346667655 68999888421    22345778899999999999999999998   9


Q ss_pred             EecccCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCcccc----------ccCCCCcchhhHHHHHH
Q 005236          511 IHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA----------SDGQFSVKSDVFSFGIL  580 (706)
Q Consensus       511 vH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~s~~sDv~SlGvi  580 (706)
                      +||||||+||||+.++.+||+|||+++.....     .....| +.|+|||++          ....++.++|||||||+
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi  306 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA  306 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence            99999999999999999999999999875322     233567 999999999          55568899999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          581 LLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       581 l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                      +|||++|+.||..........               .++....  ..+    ..+.+++..||+.||.+||++.+++
T Consensus       307 l~elltg~~Pf~~~~~~~~~~---------------~~~~~~~--~~~----~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          307 IYWIWCADLPNTDDAALGGSE---------------WIFRSCK--NIP----QPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             HHHHHHSSCCCCTTGGGSCSG---------------GGGSSCC--CCC----HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HHHHHHCCCCCCCcchhhhHH---------------HHHhhcc--cCC----HHHHHHHHHHccCChhhCcCHHHHH
Confidence            999999999986433221111               1111000  111    3466789999999999999976664

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1e-34  Score=307.27  Aligned_cols=242  Identities=17%  Similarity=0.134  Sum_probs=181.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccc--------hhhHHHHHHHHHHHhhcC---------Ccceeee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS--------EQGLKELKNEIILFSKLQ---------HRNLVKL  448 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l  448 (706)
                      .++|++.++||+|+||.||+|+. +++.||||++....        ....+.+.+|+.++++++         |||||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            46799999999999999999998 67999999986532        233578899999998886         7777777


Q ss_pred             EeEEE-----------------e-------------CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHH
Q 005236          449 LGCCI-----------------H-------------GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG  498 (706)
Q Consensus       449 ~~~~~-----------------~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~  498 (706)
                      .+++.                 +             ....++||||+++|++.+.+.+    ..+++..+..++.||+.|
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence            76643                 2             6789999999999977666633    457899999999999999


Q ss_pred             HHHHH-hCCCCceEecccCCCcEEEcCCC--------------------CeEEeeeccccccCCCCCcccccccccccCc
Q 005236          499 LLYLH-QDSRLRIIHRDLKASNVLLDQDM--------------------NPKISDFGLARAFGGDETEGNTNRVVGTYGY  557 (706)
Q Consensus       499 l~~LH-~~~~~~ivH~Dikp~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y  557 (706)
                      |+||| +.+   |+||||||+||||+.++                    .+||+|||+|+....       ....||+.|
T Consensus       174 L~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y  243 (336)
T 2vuw_A          174 LAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVS  243 (336)
T ss_dssp             HHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCT
T ss_pred             HHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecc
Confidence            99999 888   99999999999999887                    899999999987642       135799999


Q ss_pred             cCccccccCCCCcchhhHHHHHH-HHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHH
Q 005236          558 MAPEYASDGQFSVKSDVFSFGIL-LLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCI  636 (706)
Q Consensus       558 ~aPE~~~~~~~s~~sDv~SlGvi-l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  636 (706)
                      +|||++.+.. +.++||||++++ .+++++|..||...     .....................    ..........+.
T Consensus       244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~  313 (336)
T 2vuw_A          244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-----LWLHYLTDKMLKQMTFKTKCN----TPAMKQIKRKIQ  313 (336)
T ss_dssp             TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-----HHHHHHHHHHHHTCCCSSCCC----SHHHHHHHHHHH
T ss_pred             cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-----hhhhHHHHhhhhhhccCcccc----hhhhhhcCHHHH
Confidence            9999998766 899999998777 78888898885210     000001111111111110000    000112334678


Q ss_pred             HHHHHhcCCCCCCCCChhHHH
Q 005236          637 HIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       637 ~l~~~cl~~~p~~RPt~~ev~  657 (706)
                      +|+.+||+.|     |++|++
T Consensus       314 dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          314 EFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHGGGSS-----SHHHHH
T ss_pred             HHHHHHhccC-----CHHHHH
Confidence            8999999976     889888

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=2.3e-29  Score=283.07  Aligned_cols=186  Identities=18%  Similarity=0.159  Sum_probs=131.0

Q ss_pred             ceeccCCceeEEEEEe-CCCcEEEEEEcCcc----------chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEE
Q 005236          393 KKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI----------SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  460 (706)
                      ..++.|+.|.+..++. --|+.+++|.+.+.          .+...++|.+|+++|+++ .|+||++++++++++...||
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL  319 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL  319 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence            3456677776666543 23778999998542          234457899999999999 79999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||++|++|.++|.+..   .++..   +|+.||+.||+|||+++   ||||||||+||||+++|++||+|||+|+...
T Consensus       320 VMEyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~  390 (569)
T 4azs_A          320 VMEKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTP  390 (569)
T ss_dssp             EEECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred             EEecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence            999999999999996543   35543   58899999999999998   9999999999999999999999999998764


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCC
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKN  590 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p  590 (706)
                      .+..  .....+||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus       391 ~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          391 QDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             ---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             CCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            3322  2334689999999999875 467789999999999988776543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.92  E-value=7.2e-26  Score=253.23  Aligned_cols=185  Identities=17%  Similarity=0.199  Sum_probs=146.0

Q ss_pred             CccceeccCCceeEEEEEeCCCcEEEEEEcCccc--------hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          390 SINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS--------EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ...++||+|+||.||+|+. .++.+++|+.....        ....+.+.+|+.++++++||||+++..++...+..++|
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            3457999999999999954 56788888754311        11245689999999999999999777777788888999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++++|.+++..           +..++.||++||+|||+++   |+||||||+|||+++  .+||+|||+++....
T Consensus       418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~  481 (540)
T 3en9_A          418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNL  481 (540)
T ss_dssp             EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred             EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence            999999999999854           4579999999999999988   999999999999999  999999999998643


Q ss_pred             CCCcc-----cccccccccCccCcccccc--CCCCcchhhHHHHHHHHHHHhCCCCC
Q 005236          542 DETEG-----NTNRVVGTYGYMAPEYASD--GQFSVKSDVFSFGILLLEIVSGKKNR  591 (706)
Q Consensus       542 ~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~s~~sDv~SlGvil~elltG~~p~  591 (706)
                      .....     ......||+.|||||++..  ..|+..+|+|+..+-..+.+.++.++
T Consensus       482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            22111     1234679999999999987  67888899999999999988887764

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.88  E-value=5.4e-23  Score=210.82  Aligned_cols=152  Identities=19%  Similarity=0.142  Sum_probs=122.9

Q ss_pred             HHHHHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccch------------------hhHHHHHHHHHHHhhcC
Q 005236          380 ATIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISE------------------QGLKELKNEIILFSKLQ  441 (706)
Q Consensus       380 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~  441 (706)
                      ..+......|.+.+.||+|+||.||+|+..+++.||||.++....                  .....+.+|+.++++++
T Consensus        83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~  162 (282)
T 1zar_A           83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ  162 (282)
T ss_dssp             HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence            344455567778899999999999999997799999999864221                  23567899999999999


Q ss_pred             CcceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEE
Q 005236          442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVL  521 (706)
Q Consensus       442 h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nil  521 (706)
                        | +++.+++. .+..++||||+++++|.+ +..         .....++.||+.||.|||+.+   |+||||||+|||
T Consensus       163 --~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NIL  225 (282)
T 1zar_A          163 --G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVL  225 (282)
T ss_dssp             --T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEE
T ss_pred             --C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEE
Confidence              4 66666543 356799999999999988 411         234569999999999999988   999999999999


Q ss_pred             EcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccc
Q 005236          522 LDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS  564 (706)
Q Consensus       522 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~  564 (706)
                      |+ ++.+||+|||+++.               +..++|||++.
T Consensus       226 l~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~  252 (282)
T 1zar_A          226 VS-EEGIWIIDFPQSVE---------------VGEEGWREILE  252 (282)
T ss_dssp             EE-TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred             EE-CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence            99 99999999999864               34578999874

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.85  E-value=2e-21  Score=196.20  Aligned_cols=143  Identities=16%  Similarity=0.181  Sum_probs=104.4

Q ss_pred             ceEEEEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcc
Q 005236            4 LSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPE   83 (706)
Q Consensus         4 ~~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~   83 (706)
                      +++|+|+|+|||||++  +    .+||||  |||||||||||||.+.++|..  |   ++.+||++|.|++.|+++|.  
T Consensus       111 ~~~a~L~d~GNlVl~~--~----~~lWqS--~ptdtlLpg~~~~~~l~~g~~--L---~S~~dps~G~fsl~l~~dGn--  175 (276)
T 3m7h_A          111 RTHLVLQDDGNIVLVD--S----LALWNG--TPAIPLVPGAIDSLLLAPGSE--L---VQGVVYGAGASKLVFQGDGN--  175 (276)
T ss_dssp             HEEEEECTTSCEEEEE--E----EEEEES--CTTSCCCCSCTTCEEECSSEE--E---CTTCEEEETTEEEEECTTSC--
T ss_pred             ceEEEEeCCCCEEecC--C----ceeeCc--ccccccccccccccccccCcc--c---ccCCCCCCceEEEeecCCce--
Confidence            5689999999999997  2    799999  999999999999999998865  6   67899999999999999995  


Q ss_pred             eEEee-CCceeeeeCCCCCCccccccccccCcceeEEeecCC-eeEEEEEccCCceEEEEEEecccceEEEEEEeccCcc
Q 005236           84 LIMWK-GSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSED-ELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQN  161 (706)
Q Consensus        84 ~~~~~-~~~~yw~sg~w~g~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~w~~~~~~  161 (706)
                      +++++ ++.+||++|+|++.. ....+....  .+.+.++.. ....++.  ......|++|+.|| +++.|.|   ...
T Consensus       176 lvLy~~~~~~yW~Sgt~~~~~-~~l~l~~dG--nLvl~d~~~~~vWsS~t--~~~~~~rl~Ld~dG-nLvly~~---~~~  246 (276)
T 3m7h_A          176 LVAYGPNGAATWNAGTQGKGA-VRAVFQGDG--NLVVYGAGNAVLWHSHT--GGHASAVLRLQANG-SIAILDE---KPV  246 (276)
T ss_dssp             EEEECTTSSEEEECCCTTTTC-CEEEECTTS--CEEEECTTSCEEEECSC--TTCTTCEEEECTTS-CEEEEEE---EEE
T ss_pred             EEEEeCCCeEEEECCCCCCcc-EEEEEcCCC--eEEEEeCCCcEEEEecC--CCCCCEEEEEcCCc-cEEEEcC---CCe
Confidence            45555 468999999997643 111122111  222333332 2222222  22334799999999 8899998   346


Q ss_pred             eEEEEeccC
Q 005236          162 WELQLNVPR  170 (706)
Q Consensus       162 W~~~~~~p~  170 (706)
                      |..++..|.
T Consensus       247 Wqsf~~~P~  255 (276)
T 3m7h_A          247 WARFGFQPT  255 (276)
T ss_dssp             EESSSCCTT
T ss_pred             EEccCccCC
Confidence            777766665

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=99.79  E-value=4.1e-19  Score=176.42  Aligned_cols=131  Identities=8%  Similarity=0.090  Sum_probs=96.2

Q ss_pred             eEEEEecCCcEEEEecCCCCCceEEEeecCCCcccc-cCCCccccee-ecCC-----ceEEEecCCCCCCCCCceEEEEe
Q 005236            5 SFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTL-LPGMKLGWDL-KTGL-----ERRITSWKSPDDPSPGNFTWAVE   77 (706)
Q Consensus         5 ~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtl-Lpgqklg~~~-~tg~-----~~~L~Sw~s~~dps~G~fsl~~~   77 (706)
                      ..|+|+|+|||||++       .++||||||||||+ ||+|  |.|. .+|+     ++.|+|   .+||++|.|++.++
T Consensus        90 ~~~~l~d~Gnlvl~~-------~~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~L~s---~~d~s~G~~~l~l~  157 (236)
T 1dlp_A           90 YVLVLQPDRTVTIYG-------PGLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQTLHA---TQSLQLSPYRLSME  157 (236)
T ss_dssp             CEEEECSSSCEEEEC-------SEEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCEECS---SCCCBCSSCEEEEE
T ss_pred             EEEEEeCCCCEEEec-------CCEEECCCCCCcccccCCc--cceEEecCCcCCCccceEEc---CcEeecCcEEEEEC
Confidence            479999999999994       28999999999888 6776  6665 6665     667875   78999999999999


Q ss_pred             eCCCcceEEeeCCceeeeeCCCCCCcccccc-ccccCcceeEEeecCCeeEEEEEccCCceEEEEEEecccceEEEE
Q 005236           78 RQDNPELIMWKGSRKFYRSGPWNGLRFSAAT-LRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRF  153 (706)
Q Consensus        78 ~~g~~~~~~~~~~~~yw~sg~w~g~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~  153 (706)
                      ++|  +++++++..+||++++|++. +...+ +..... .+.+..+..+.+.+|..... ...|++|+.+| ++++|
T Consensus       158 ~dG--~LvL~~~~~~~W~s~~~~~~-~~~~~~L~~~Gn-l~ly~~~~~~vw~s~~~~~~-~~~rl~Ld~dG-~l~ly  228 (236)
T 1dlp_A          158 TDC--NLVLFDRDDRVWSTNTAGKG-TGCRAVLQPNGR-MDVLTNQNIAVWTSGNSRSA-GRYVFVLQPDR-NLAIY  228 (236)
T ss_dssp             TTT--EEEEEBTTBCCSCCCCCSSC-SSCEEEEETTTE-EEEEETTTEEEEECCCCCSS-SCCEEEECSSS-CEEEE
T ss_pred             CCC--cEEEEcCCEeEEeCCCcCCC-CceEEEECCCCc-EEEEeCCCcEEEEeCCCCCC-CCEEEEEcCCC-cEEEe
Confidence            998  58888888999999999764 44444 332221 12223344445555554333 46899999999 88877

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.76  E-value=1e-18  Score=176.70  Aligned_cols=137  Identities=15%  Similarity=0.153  Sum_probs=106.9

Q ss_pred             CCCccceeccCCceeEEEEEe-CCCcE--EEEEEcCccch------------------------hhHHHHHHHHHHHhhc
Q 005236          388 NFSINKKLGEGGFGPVYKGTL-ADEQE--IAVKRLSKISE------------------------QGLKELKNEIILFSKL  440 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~E~~~l~~l  440 (706)
                      -|.+.+.||+|+||.||+|.. .+|+.  ||||+++....                        .....+.+|+..+.++
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            367889999999999999998 67888  99998643211                        1123678999999999


Q ss_pred             CCcce--eeeEeEEEeCCeeEEEEecCCC-C----ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHH-hCCCCceEe
Q 005236          441 QHRNL--VKLLGCCIHGEEKLLIYEFMPN-K----SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH-QDSRLRIIH  512 (706)
Q Consensus       441 ~h~ni--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH  512 (706)
                      +|+++  +.++..    ...++||||+.+ |    +|.+++..      .++..+..++.||+.+|.||| +.+   |+|
T Consensus       128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~g---ivH  194 (258)
T 1zth_A          128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEAE---LVH  194 (258)
T ss_dssp             HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTSC---EEC
T ss_pred             HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHCC---EEe
Confidence            88864  334432    367899999942 4    56555422      224466789999999999999 887   999


Q ss_pred             cccCCCcEEEcCCCCeEEeeecccccc
Q 005236          513 RDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       513 ~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      |||||.|||+++  .++|+|||+|...
T Consensus       195 rDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCCCHHHEEEcC--cEEEEECcccccC
Confidence            999999999998  9999999999764

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.66  E-value=4.8e-17  Score=170.86  Aligned_cols=142  Identities=13%  Similarity=0.154  Sum_probs=101.4

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccc--------------hhhHHH--------HHHHHHHHhhc
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS--------------EQGLKE--------LKNEIILFSKL  440 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------------~~~~~~--------~~~E~~~l~~l  440 (706)
                      ....--|++..+||+|+||.||+|...+|+.||||+++...              ......        ...|...|.++
T Consensus        91 ~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL  170 (397)
T 4gyi_A           91 AARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL  170 (397)
T ss_dssp             HHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence            33334489999999999999999999999999999864310              000111        23455666666


Q ss_pred             CCcceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcE
Q 005236          441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNV  520 (706)
Q Consensus       441 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Ni  520 (706)
                      .+.++.-...+..  ...+|||||+++++|..+..         ......++.||+.+|.+||..+   ||||||||.||
T Consensus       171 ~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NI  236 (397)
T 4gyi_A          171 YEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLAKHG---LIHGDFNEFNI  236 (397)
T ss_dssp             HHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSE
T ss_pred             HhcCCCCCeeeec--cCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHE
Confidence            5444321111111  23379999999998876541         1233567899999999999988   99999999999


Q ss_pred             EEcCCCC----------eEEeeeccccc
Q 005236          521 LLDQDMN----------PKISDFGLARA  538 (706)
Q Consensus       521 ll~~~~~----------~kl~Dfgla~~  538 (706)
                      ||++++.          +.|+||+.+..
T Consensus       237 Ll~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          237 LIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             EEeCCCCcccccccccceEEEEeCCccc
Confidence            9998873          89999998765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.36  E-value=2.7e-12  Score=129.89  Aligned_cols=147  Identities=16%  Similarity=0.071  Sum_probs=116.3

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEE
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV  461 (706)
                      ....++|++...++.|+.+.||++... ++.+++|+...........+.+|+.+++.+. |..+.++++++...+..++|
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv   88 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence            445578988899999999999999864 6789999986532223346889999999885 67788999999988899999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC------------------------------------
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD------------------------------------  505 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------  505 (706)
                      |||++|.+|.+.+.        +......++.+++++|..||+.                                    
T Consensus        89 ~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T 3tm0_A           89 MSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred             EEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence            99999999987631        1122346888999999999981                                    


Q ss_pred             --------------------CCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          506 --------------------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       506 --------------------~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                                          .+..++|+|++|.|||++++..+.|+||+.+..
T Consensus       161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                114599999999999998766677999998753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.17  E-value=3e-11  Score=121.71  Aligned_cols=139  Identities=17%  Similarity=0.131  Sum_probs=103.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc--eeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN--LVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e  463 (706)
                      ..++.+....+.|..+.||++...+|..+++|.....   ....+..|+.+++.+.+.+  +.+++++...++..++|||
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e   95 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG   95 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred             cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence            3455554444466679999998877888999987543   2246788999999886544  5568888887778899999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS-------------------------------------  506 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------  506 (706)
                      |++|.+|.  ...      .+   ...++.++++.|..||+..                                     
T Consensus        96 ~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (264)
T 1nd4_A           96 EVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG  164 (264)
T ss_dssp             CCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred             ecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence            99999884  211      11   2256777888888888643                                     


Q ss_pred             ------------------CCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          507 ------------------RLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       507 ------------------~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                                        +..++|+|++|.|||+++++.+.|+||+.+..
T Consensus       165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                              12399999999999998876678999998754

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.10  E-value=2.4e-10  Score=98.78  Aligned_cols=60  Identities=20%  Similarity=0.396  Sum_probs=47.8

Q ss_pred             ceEEEEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcc
Q 005236            4 LSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPE   83 (706)
Q Consensus         4 ~~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~   83 (706)
                      .+.|+|+++|||||++ ++    .++||||                               ++|++|.|++.++++|+  
T Consensus        51 ~~~l~l~~~GNLvl~d-~~----~~~W~S~-------------------------------~~~~~g~~~l~l~~dGn--   92 (112)
T 1xd5_A           51 GCVLKMQNDGNLVIYS-GS----RAIWASN-------------------------------TNRQNGNYYLILQRDRN--   92 (112)
T ss_dssp             SEEEEECTTSCEEEEE-TT----EEEEECC-------------------------------CCCSCCCCEEEECTTSC--
T ss_pred             CEEEEEeCCCCEEEEc-CC----EEEEECC-------------------------------ccCCCCCEEEEEeCCCc--
Confidence            3568888888888887 33    6888888                               35578899999999998  


Q ss_pred             eEEee-CCceeeeeCCCCC
Q 005236           84 LIMWK-GSRKFYRSGPWNG  101 (706)
Q Consensus        84 ~~~~~-~~~~yw~sg~w~g  101 (706)
                      ++++. ...+||+|++|+|
T Consensus        93 lvl~~~~~~~~W~S~~~~g  111 (112)
T 1xd5_A           93 VVIYDNSNNAIWATHTNVG  111 (112)
T ss_dssp             EEEECTTSCEEEECCCCCC
T ss_pred             EEEECCCCceEEECCCccC
Confidence            56665 5689999999987

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.98  E-value=1.6e-09  Score=114.79  Aligned_cols=142  Identities=16%  Similarity=0.209  Sum_probs=107.3

Q ss_pred             ccceeccCCceeEEEEEeCCCcEEEEEEcC--ccc-hhhHHHHHHHHHHHhhcC--CcceeeeEeEEEeC---CeeEEEE
Q 005236          391 INKKLGEGGFGPVYKGTLADEQEIAVKRLS--KIS-EQGLKELKNEIILFSKLQ--HRNLVKLLGCCIHG---EEKLLIY  462 (706)
Q Consensus       391 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lV~  462 (706)
                      ..+.|+.|.++.||+....+ ..+++|+..  ... ......+.+|+.+++.+.  +..+++++.++.+.   +..++||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            35789999999999998754 678888775  321 123457788999999997  45578888888766   3479999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS------------------------------------  506 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------  506 (706)
                      ||++|..+.+..     ...++...+..++.++++.|..||...                                    
T Consensus       121 e~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (359)
T 3dxp_A          121 EFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP  195 (359)
T ss_dssp             ECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred             EecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence            999998885422     123677788889999999999999731                                    


Q ss_pred             -------------------CCceEecccCCCcEEEcCCCC--eEEeeeccccc
Q 005236          507 -------------------RLRIIHRDLKASNVLLDQDMN--PKISDFGLARA  538 (706)
Q Consensus       507 -------------------~~~ivH~Dikp~Nill~~~~~--~kl~Dfgla~~  538 (706)
                                         +..++|+|++|.|||++.++.  +.|+||+.+..
T Consensus       196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                               256999999999999997753  68999999865

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=98.94  E-value=1.7e-09  Score=94.14  Aligned_cols=55  Identities=15%  Similarity=0.317  Sum_probs=43.8

Q ss_pred             eEEEEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcce
Q 005236            5 SFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPEL   84 (706)
Q Consensus         5 ~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~   84 (706)
                      +.++|+++|||||++.++    .++||||                               ++|++|.|++.++++|+  +
T Consensus        63 ~~l~l~~dGNLVl~d~~~----~~lW~S~-------------------------------~~~~~g~~~l~l~~~Gn--l  105 (119)
T 1b2p_A           63 CRAVLQPDGVLVVITNEN----VTVWQSP-------------------------------VAGKAGHYVLVLQPDRN--V  105 (119)
T ss_dssp             CEEEECTTSCEEEECTTC----CEEEECS-------------------------------CCCCSSCEEEEECTTSC--E
T ss_pred             eEEEEccCCEEEEEeCCC----cEEEcCC-------------------------------CCCCCCCEEEEEECCCc--E
Confidence            468888888888886533    6888888                               46678999999999998  5


Q ss_pred             EEeeCCceeeeeCC
Q 005236           85 IMWKGSRKFYRSGP   98 (706)
Q Consensus        85 ~~~~~~~~yw~sg~   98 (706)
                      ++++  .+||+||+
T Consensus       106 vl~~--~~~W~Sg~  117 (119)
T 1b2p_A          106 VIYG--DALWATQT  117 (119)
T ss_dssp             EEEE--SEEEECCC
T ss_pred             EEEC--ccEeCCCC
Confidence            6666  49999986

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=98.93  E-value=1.8e-09  Score=93.58  Aligned_cols=59  Identities=17%  Similarity=0.390  Sum_probs=46.8

Q ss_pred             eEEEEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcce
Q 005236            5 SFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPEL   84 (706)
Q Consensus         5 ~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~   84 (706)
                      +.++|+++|||||++.++    .++||||++                               |++|.|++.++++|+  +
T Consensus        53 ~~l~l~~~GnLvl~d~~~----~~vW~S~~~-------------------------------~~~g~~~l~l~~dGn--l   95 (115)
T 2dpf_A           53 CRLTLLSDGNLVIYDHNN----NDVWGSACW-------------------------------GDNGKYALVLQKDGR--F   95 (115)
T ss_dssp             CEEEECTTSCEEEECTTC----CEEEECCCC-------------------------------CSSSCCEEEECTTSC--E
T ss_pred             eEEEECCCCcEEEECCCc----eEEEEcCCC-------------------------------CCCCCEEEEEeCCCe--E
Confidence            468888888888887533    688888887                               457889999999998  6


Q ss_pred             EEeeCCceeeeeCCCCCC
Q 005236           85 IMWKGSRKFYRSGPWNGL  102 (706)
Q Consensus        85 ~~~~~~~~yw~sg~w~g~  102 (706)
                      ++++.  +||+|++|...
T Consensus        96 vl~~~--~~W~S~~~~~~  111 (115)
T 2dpf_A           96 VIYGP--VLWSLGPNGCR  111 (115)
T ss_dssp             EEECS--EEECSSTTCBC
T ss_pred             EEECC--CEEECCCCCCc
Confidence            66654  89999999654

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=98.93  E-value=2.2e-09  Score=92.24  Aligned_cols=31  Identities=6%  Similarity=0.330  Sum_probs=25.7

Q ss_pred             CCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCC
Q 005236           65 DDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPW   99 (706)
Q Consensus        65 ~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w   99 (706)
                      +++++|.|++.++++|+  +++++.  +||+|+++
T Consensus        78 t~~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~  108 (110)
T 3a0c_A           78 TNGKEDHYVLVLQQDRN--VVIYGP--VVWATGSG  108 (110)
T ss_dssp             CCCSSSCCEEEECTTSC--EEEECS--EEEECSCC
T ss_pred             CCCCCCCEEEEEeCCcc--EEEECC--CEecCCCc
Confidence            56788999999999998  566665  89999975

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.90  E-value=1.2e-09  Score=112.80  Aligned_cols=185  Identities=18%  Similarity=0.213  Sum_probs=121.1

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-Ccc--eeeeEeEEEeCC---eeEEEEecCC
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRN--LVKLLGCCIHGE---EKLLIYEFMP  466 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lV~e~~~  466 (706)
                      +.++.|....||+..    ..+++|+....  .....+.+|..+++.+. +..  +.+.+......+   ..++|||+++
T Consensus        26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~   99 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK   99 (304)
T ss_dssp             CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred             EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence            569999999999864    56889986432  34567899999998884 333  344444433333   3488999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-----------------------------------------  505 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----------------------------------------  505 (706)
                      |.+|.....     ..++..++..++.++++.|..||..                                         
T Consensus       100 G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  174 (304)
T 3sg8_A          100 GVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD  174 (304)
T ss_dssp             CEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred             CeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence            999875432     2356677778888888888888861                                         


Q ss_pred             --------------CCCceEecccCCCcEEEcC--CCCeEEeeeccccccCCCCCccccc------------ccccccCc
Q 005236          506 --------------SRLRIIHRDLKASNVLLDQ--DMNPKISDFGLARAFGGDETEGNTN------------RVVGTYGY  557 (706)
Q Consensus       506 --------------~~~~ivH~Dikp~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~~~------------~~~gt~~y  557 (706)
                                    ....++|+|++|.||++++  ...+.|+||+.+..-..........            ......+.
T Consensus       175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~  254 (304)
T 3sg8_A          175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH  254 (304)
T ss_dssp             HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence                          1245899999999999998  5568899999987531110000000            00000011


Q ss_pred             cC-ccccccCCCCcchhhHHHHHHHHHHHhCCCC
Q 005236          558 MA-PEYASDGQFSVKSDVFSFGILLLEIVSGKKN  590 (706)
Q Consensus       558 ~a-PE~~~~~~~s~~sDv~SlGvil~elltG~~p  590 (706)
                      .. |+....  .....+.|+++.++|.+.+|..+
T Consensus       255 ~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~  286 (304)
T 3sg8_A          255 KDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMD  286 (304)
T ss_dssp             SCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHH
T ss_pred             CCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHH
Confidence            12 222211  12236899999999999999876

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.45  E-value=1.8e-06  Score=88.97  Aligned_cols=136  Identities=22%  Similarity=0.162  Sum_probs=93.9

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCc---ceeeeEeEEE-eCCeeEEEEecCCC
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR---NLVKLLGCCI-HGEEKLLIYEFMPN  467 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~e~~~~  467 (706)
                      .+.++.|....||+.    +..++||+..  .......+..|..+++.+.+.   .+.+.+.+.. ..+..++||||++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            367888999999987    5678888853  233456789999999999753   3566666664 34457899999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD------------------------------------------  505 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------  505 (706)
                      .+|.....     ..++......++.++++.|..||..                                          
T Consensus        98 ~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l  172 (306)
T 3tdw_A           98 QILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL  172 (306)
T ss_dssp             EECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             eECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence            98876321     1123334444444444444444432                                          


Q ss_pred             ---------------CCCceEecccCCCcEEEcC---CCC-eEEeeeccccc
Q 005236          506 ---------------SRLRIIHRDLKASNVLLDQ---DMN-PKISDFGLARA  538 (706)
Q Consensus       506 ---------------~~~~ivH~Dikp~Nill~~---~~~-~kl~Dfgla~~  538 (706)
                                     .+..++|+|++|.||+++.   ++. +.|+||+.+..
T Consensus       173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                           2335799999999999998   455 48999998865

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.40  E-value=2.6e-06  Score=85.96  Aligned_cols=136  Identities=16%  Similarity=0.138  Sum_probs=98.4

Q ss_pred             ceeccCCce-eEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeEEEEecCCCCC
Q 005236          393 KKLGEGGFG-PVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKLLIYEFMPNKS  469 (706)
Q Consensus       393 ~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gs  469 (706)
                      +.+..|..+ .||+.... ++..++||+-...   ....+..|...++.+. +--+.++++++.+.+..++|||+++|.+
T Consensus        30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            455556655 68988764 4567899976432   3456788999988884 3346788899999999999999999998


Q ss_pred             hhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------------------
Q 005236          470 LDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD--------------------------------------------  505 (706)
Q Consensus       470 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~--------------------------------------------  505 (706)
                      +.+.....       ......+..++++.|..||..                                            
T Consensus       107 ~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (272)
T 4gkh_A          107 AFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV  179 (272)
T ss_dssp             HHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred             ccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence            87755321       122334566667777777642                                            


Q ss_pred             -----------CCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          506 -----------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       506 -----------~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                                 ....++|+|+++.|||+++++.+-|+||+.+..
T Consensus       180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                       112489999999999999887778999998754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.29  E-value=1.3e-06  Score=92.18  Aligned_cols=81  Identities=6%  Similarity=0.019  Sum_probs=56.5

Q ss_pred             ccee-ccCCceeEEEEEeC-------CCcEEEEEEcCccc---hhhHHHHHHHHHHHhhcCC---cceeeeEeEEEeC--
Q 005236          392 NKKL-GEGGFGPVYKGTLA-------DEQEIAVKRLSKIS---EQGLKELKNEIILFSKLQH---RNLVKLLGCCIHG--  455 (706)
Q Consensus       392 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~--  455 (706)
                      .+.| +.|....+|+....       +++.+++|+.....   ......+..|+.+++.+..   ..+.+++.++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            3677 88999999998764       26678898765422   1012456788888887742   3467788777654  


Q ss_pred             -CeeEEEEecCCCCChhh
Q 005236          456 -EEKLLIYEFMPNKSLDS  472 (706)
Q Consensus       456 -~~~~lV~e~~~~gsL~~  472 (706)
                       ...++||||++|.++.+
T Consensus       105 ~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             TSSCEEEEECCCCBCCCB
T ss_pred             cCCceEEEEecCCCChhh
Confidence             34689999999987654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.02  E-value=2.2e-05  Score=83.91  Aligned_cols=75  Identities=9%  Similarity=0.173  Sum_probs=50.3

Q ss_pred             cceeccCCceeEEEEEeC-CCcEEEEEEcCccch-------hhHHHHHHHHHHHhhcCC--cc-eeeeEeEEEeCCeeEE
Q 005236          392 NKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE-------QGLKELKNEIILFSKLQH--RN-LVKLLGCCIHGEEKLL  460 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l  460 (706)
                      .+.||.|..+.||+++.. +++.++||.......       ...+.+..|..+++.+..  |. +.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            468999999999999764 467899997643211       123456778888887742  44 4455543  4556789


Q ss_pred             EEecCCCC
Q 005236          461 IYEFMPNK  468 (706)
Q Consensus       461 V~e~~~~g  468 (706)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999874

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.98  E-value=3.5e-05  Score=80.36  Aligned_cols=141  Identities=18%  Similarity=0.243  Sum_probs=80.8

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-----CcceeeeE-e--EEEeCCeeEEEEec
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-----HRNLVKLL-G--CCIHGEEKLLIYEF  464 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~-~--~~~~~~~~~lV~e~  464 (706)
                      +.|+.|..+.||+....++ .+++|+.... .   ..+..|+.++..|.     .|.++... +  +....+..++||||
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            4566677899999987655 5899988652 2   33344555555443     24443310 1  22346678999999


Q ss_pred             CCCCChh-----------h---hhhcccc-c----------CCCCHHHHH------------------------------
Q 005236          465 MPNKSLD-----------S---FIFDQER-C----------KLLDWSKRF------------------------------  489 (706)
Q Consensus       465 ~~~gsL~-----------~---~l~~~~~-~----------~~l~~~~~~------------------------------  489 (706)
                      ++|..+.           .   .++.... .          ....|...+                              
T Consensus       113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  192 (346)
T 2q83_A          113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI  192 (346)
T ss_dssp             CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred             ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence            9987653           0   1111110 0          011232110                              


Q ss_pred             -HHHHHHHHHHHHHHh----------CCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          490 -HIICGTARGLLYLHQ----------DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       490 -~i~~~ia~~l~~LH~----------~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                       .+...+.+++.+|+.          ..+..++|+|+++.|||++.++.+.|+||+.+..
T Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence             111223445666663          1245699999999999998888999999998753

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.77  E-value=9.6e-05  Score=75.07  Aligned_cols=79  Identities=16%  Similarity=0.188  Sum_probs=58.2

Q ss_pred             CCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCc---ceeeeEeEEEeCCeeEEEEec
Q 005236          388 NFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHR---NLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ...-.+.+|.|..+.||+.+..+|+.++||+...........+..|+..|+.|.-.   -+++.++.    +..++||||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence            34456889999999999999999999999987654444445678899998888422   24445543    234789999


Q ss_pred             CCCCCh
Q 005236          465 MPNKSL  470 (706)
Q Consensus       465 ~~~gsL  470 (706)
                      ++++..
T Consensus        92 l~~~~~   97 (288)
T 3f7w_A           92 VDERPP   97 (288)
T ss_dssp             CCCCCC
T ss_pred             ecccCC
Confidence            987754

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.71  E-value=0.00016  Score=77.73  Aligned_cols=79  Identities=13%  Similarity=0.042  Sum_probs=49.8

Q ss_pred             CCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccccccc-ccccCccCccccccC---CCCcchhhHHHHHHHH
Q 005236          507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRV-VGTYGYMAPEYASDG---QFSVKSDVFSFGILLL  582 (706)
Q Consensus       507 ~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~---~~s~~sDv~SlGvil~  582 (706)
                      ...++|+|++|.|||++.++ ++|+||+.+..-..  ........ .-...|++|+.....   .-....++......+|
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p--~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPM--GFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW  307 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECH--HHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCch--HHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence            45699999999999999877 99999998875210  00000000 012356677655321   1123456678888888


Q ss_pred             HHHhCC
Q 005236          583 EIVSGK  588 (706)
Q Consensus       583 elltG~  588 (706)
                      +.++++
T Consensus       308 ~~y~~~  313 (420)
T 2pyw_A          308 NLFNKR  313 (420)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887764

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.69  E-value=0.00041  Score=71.05  Aligned_cols=138  Identities=16%  Similarity=0.128  Sum_probs=92.8

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC---CcceeeeEeEEEeCCeeEEEEecCCCC
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ---HRNLVKLLGCCIHGEEKLLIYEFMPNK  468 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e~~~~g  468 (706)
                      .+.|+.|....+|+... +++.++||+....   ....+..|...++.|.   ...+++.+.++...+..++||||+++.
T Consensus        41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            47899999999999886 4678889986532   3567888999888874   356888888888888899999999998


Q ss_pred             Chhh-----------hhhcccc---cC----------------CCCHHHHH---HHHH----------------HHHHH-
Q 005236          469 SLDS-----------FIFDQER---CK----------------LLDWSKRF---HIIC----------------GTARG-  498 (706)
Q Consensus       469 sL~~-----------~l~~~~~---~~----------------~l~~~~~~---~i~~----------------~ia~~-  498 (706)
                      .+..           .|+....   ..                .-+|....   ++..                .++.. 
T Consensus       117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l  196 (312)
T 3jr1_A          117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV  196 (312)
T ss_dssp             CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence            7531           1222111   00                12454322   1111                11111 


Q ss_pred             HHHHHh-CCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          499 LLYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       499 l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                      ...|.. ..++.++|+|+.+.|++++.++ +.|+||.
T Consensus       197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            223421 2356799999999999999888 8899974

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=97.60  E-value=7.9e-05  Score=63.60  Aligned_cols=27  Identities=7%  Similarity=0.214  Sum_probs=21.0

Q ss_pred             CCCceEEEEeeCCCcceEEeeCCceeeeeCC
Q 005236           68 SPGNFTWAVERQDNPELIMWKGSRKFYRSGP   98 (706)
Q Consensus        68 s~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~   98 (706)
                      ..|.|.+.++.+|+..++  .  .++|.+++
T Consensus        83 ~~~~~~l~Lq~dGNlvly--~--~~~W~s~t  109 (111)
T 3mez_A           83 VRGNYAATLGPDQHVTIY--G--PAIWSTPA  109 (111)
T ss_dssp             CSSCCEEEECTTSCEEEE--C--SEEEECCC
T ss_pred             CCcCEEEEECCCCeEEEe--c--cCEEccCC
Confidence            457899999999986554  3  78998875

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=97.48  E-value=0.0002  Score=61.35  Aligned_cols=83  Identities=12%  Similarity=0.108  Sum_probs=51.0

Q ss_pred             ceEEEEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCcccce------eecCCceEEEecCCCCCCCCCceEEEEe
Q 005236            4 LSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWD------LKTGLERRITSWKSPDDPSPGNFTWAVE   77 (706)
Q Consensus         4 ~~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~------~~tg~~~~L~Sw~s~~dps~G~fsl~~~   77 (706)
                      ...+.|.++|||||++..   .+.++|.|=-+-..   ++.++...      ...+.+.  +-|.|.+.-..|.|.+.++
T Consensus        25 ~~~L~~q~dGNLvL~~~~---~~~~vWssnt~~~~---~~~~l~l~~dGNLVl~d~~~~--~iW~S~t~~~~~~~~~~L~   96 (113)
T 3mez_B           25 DYSLVMRDDCNLVLTKGS---KTNIVWESGTSGRG---QHCFMRLGHSGELDITDDRLN--TVFVSNTVGQEGDYVLILQ   96 (113)
T ss_dssp             TEEEEECTTSCEEEEETT---TTEEEEECCCTTSC---SSCEEEECTTSCEEEECTTSC--EEEECSCCCSSSCCEEEEC
T ss_pred             CEEEEEcCCCEEEEEECC---CCEEEEECCcccCC---cCEEEEEeCCCcEEEECCCCC--EEEECCCcCCCCCEEEEEc
Confidence            346788999999999752   23799997432111   22222111      0011111  2477776555678999999


Q ss_pred             eCCCcceEEeeCCceeeeeCC
Q 005236           78 RQDNPELIMWKGSRKFYRSGP   98 (706)
Q Consensus        78 ~~g~~~~~~~~~~~~yw~sg~   98 (706)
                      .+|+..++  .  .+.|.||+
T Consensus        97 ~dGnlvly--~--~~~W~s~~  113 (113)
T 3mez_B           97 INGQAVVY--G--PAVWSTAA  113 (113)
T ss_dssp             TTSCEEEE--C--SEEEESCC
T ss_pred             CCceEEEe--c--CCEecCCC
Confidence            99986544  3  68898875

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=97.46  E-value=0.00027  Score=60.08  Aligned_cols=82  Identities=17%  Similarity=0.212  Sum_probs=46.8

Q ss_pred             ceEEEEecCCcEEEEecCCCCCceEEEeecCCCcc-----cccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEee
Q 005236            4 LSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSD-----TLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVER   78 (706)
Q Consensus         4 ~~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtD-----tlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~   78 (706)
                      -..+.|.++|||||++. +    +++|.|=-...+     +|...-.|-.-  .+.+  -+-|.|.+....+.|.+.+++
T Consensus        20 ~~~L~~q~dGnLvly~~-~----~~vW~snt~~~~~~~~l~l~~dGNLvl~--~~~~--~~~W~S~t~~~~~~~~~~L~d   90 (109)
T 3dzw_A           20 RYVFIMQEDCNLVLYDV-D----KPIWATNTGGLDRRCHLSMQSDGNLVVY--SPRN--NPIWASNTGGENGNYVCVLQK   90 (109)
T ss_dssp             TEEEEECTTSCEEEEET-T----EEEEECCCTTSSSSCEEEECTTSCEEEE--CTTS--CEEEECCCCCSSSCEEEEECT
T ss_pred             CEEEEEcCCCcEEEEeC-C----EEEEECCcccCCCCEEEEEeCCCCEEEE--CCCC--CEEEECCCCCCCCCEEEEEeC
Confidence            34577888888888865 2    688887432111     11111112110  1111  135666665555778999999


Q ss_pred             CCCcceEEeeCCceeeeeCC
Q 005236           79 QDNPELIMWKGSRKFYRSGP   98 (706)
Q Consensus        79 ~g~~~~~~~~~~~~yw~sg~   98 (706)
                      +|+..++  +.  +.|.||.
T Consensus        91 dGNlvly--~~--~~W~s~t  106 (109)
T 3dzw_A           91 DRNVVIY--GT--ARWATGT  106 (109)
T ss_dssp             TSCEEEE--ES--CCCCCCC
T ss_pred             CCEEEEE--CC--CEEeCCC
Confidence            9985444  43  7787774

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=97.45  E-value=0.00023  Score=60.55  Aligned_cols=34  Identities=9%  Similarity=0.336  Sum_probs=22.3

Q ss_pred             cCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCC
Q 005236           61 WKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGP   98 (706)
Q Consensus        61 w~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~   98 (706)
                      |.|.+....|.|.+.++.+|+..++  +  .+.|.+|+
T Consensus        77 W~S~t~~~~~~~~~~L~~dGNlvly--~--~~~W~t~~  110 (110)
T 3r0e_B           77 WSSRSSSKQGEYVLILQDDGFGVIY--G--PAIFETSS  110 (110)
T ss_dssp             EECCCCCSSSCCEEEECTTSCEEEE--C--SEEEESCC
T ss_pred             EEcCCcCCCCCEEEEEcCCccEEEe--c--CCEecCCC
Confidence            4444333356689999999985544  3  47888763

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.44  E-value=0.00039  Score=71.71  Aligned_cols=143  Identities=16%  Similarity=0.113  Sum_probs=80.1

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc--eeeeEeE------EEeCCeeEEEEec
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN--LVKLLGC------CIHGEEKLLIYEF  464 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~------~~~~~~~~lV~e~  464 (706)
                      +.|+.|....+|+....++ .+++|.....  ...+.+..|+.++..+...+  +.+++..      ....+..+++|+|
T Consensus        28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~  104 (322)
T 2ppq_A           28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF  104 (322)
T ss_dssp             EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred             eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence            5677788899999987655 6888987652  11234556777776664222  2333321      1234567899999


Q ss_pred             CCCCChhh----h----------hhccc-c---c--CC---CCHHHHHH------------HHHHHHHHHHHHHhC----
Q 005236          465 MPNKSLDS----F----------IFDQE-R---C--KL---LDWSKRFH------------IICGTARGLLYLHQD----  505 (706)
Q Consensus       465 ~~~gsL~~----~----------l~~~~-~---~--~~---l~~~~~~~------------i~~~ia~~l~~LH~~----  505 (706)
                      ++|..+..    .          ++... .   .  ..   ..|...+.            +...+.+.++.++..    
T Consensus       105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~  184 (322)
T 2ppq_A          105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD  184 (322)
T ss_dssp             CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred             CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence            99876421    0          11110 0   0  00   11221110            011234455555532    


Q ss_pred             CCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       506 ~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      .+..++|+|+++.|||++++..+.|+||+.+..
T Consensus       185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             SCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            234699999999999999876668999998753

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=97.41  E-value=0.00041  Score=58.86  Aligned_cols=95  Identities=16%  Similarity=0.126  Sum_probs=52.8

Q ss_pred             cccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCCCCCccccccccccCcce
Q 005236           37 SDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFN  116 (706)
Q Consensus        37 tDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w~g~~~s~~~~~~~~~~~  116 (706)
                      +|||+|||.|..+      ..|         +.|.|.|.|+.+|+..+  ++   .||.++......-....+.....  
T Consensus         3 ~dtL~~gq~L~~g------~~L---------~~g~~~L~~q~dGNLvl--~~---~~Wssnt~~~~~~~~l~l~~dGn--   60 (109)
T 3r0e_A            3 TNYLLSGQTLDTE------GHL---------KNGDFDLVMQDDCNLVL--YN---GNWQSNTANNGRDCKLTLTDYGE--   60 (109)
T ss_dssp             CSEEETTCEECTT------CEE---------EETTEEEEECTTSCEEE--ET---TTEECCCTTSCSSCEEEECTTSC--
T ss_pred             cCCcCCCCCcCCC------CEe---------ECCCEEEEEecCCeEEE--Ee---CeEEcCCCCCCCcEEEEEcCCCe--
Confidence            6999999999433      235         46999999999998544  33   38988764321100001111111  


Q ss_pred             eEEeecCCeeEEEEEccCCceEEEEEEecccceEEEEE
Q 005236          117 FSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFT  154 (706)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~  154 (706)
                      +.+.+..................+++|..|| +++.|.
T Consensus        61 Lvl~d~~~~~vWss~t~~~~~~~~~~L~~dG-Nlvly~   97 (109)
T 3r0e_A           61 LVIKNGDGSTVWKSGAQSVKGNYAAVVHPDG-RLVVFG   97 (109)
T ss_dssp             EEEECTTSCEEEECCCCCSSSCCEEEEETTT-EEEEEC
T ss_pred             EEEEeCCCCEEEcCCCcCCCcCEEEEEcCCC-eEEEEe
Confidence            1111222223332222222345689999999 888773

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.39  E-value=0.00029  Score=75.81  Aligned_cols=73  Identities=19%  Similarity=0.318  Sum_probs=49.9

Q ss_pred             ceeccCCceeEEEEEeCC--------CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcce-eeeEeEEEeCCeeEEEEe
Q 005236          393 KKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL-VKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e  463 (706)
                      +.|+.|....||+....+        ++.+++|+.....  ..+.+..|..+++.+...++ .++++.+.  +  .+|+|
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e  152 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE  152 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence            678889999999998753        4788898874321  11445578888888753334 56666543  2  38999


Q ss_pred             cCCCCChh
Q 005236          464 FMPNKSLD  471 (706)
Q Consensus       464 ~~~~gsL~  471 (706)
                      |++|.+|.
T Consensus       153 ~l~G~~l~  160 (429)
T 1nw1_A          153 YIPSRPLS  160 (429)
T ss_dssp             CCCEEECC
T ss_pred             EeCCcccC
Confidence            99875553

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=97.37  E-value=0.00058  Score=58.05  Aligned_cols=97  Identities=12%  Similarity=0.128  Sum_probs=53.9

Q ss_pred             cccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCCCCCccccccccccCcce
Q 005236           37 SDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFN  116 (706)
Q Consensus        37 tDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w~g~~~s~~~~~~~~~~~  116 (706)
                      +|||+|||.|..+      ..|+|         |.|.|.|+.+|+.  ++++. .+||.++..+...-....+.....+ 
T Consensus         6 ~dtL~~gq~L~~g------~~L~s---------g~~~L~~q~dGnL--vl~~~-~~vW~snt~~~~~~~~l~l~~dGNL-   66 (110)
T 3r0e_B            6 NNLLFSGQVLYGD------GRLTA---------KNHQLVMQGDCNL--VLYGG-KYGWQSNTHGNGEHCFLRLNHKGEL-   66 (110)
T ss_dssp             TTEEETTCEEETT------EEEEC---------SSCEEEECTTSCE--EEECS-SSCEECCCTTSSSSCEEEECTTSCE-
T ss_pred             cCEECCCCEecCC------CEEEe---------CCEEEEEcCCCeE--EEECC-eEEEECCCcCCCcCEEEEEeCCCcE-
Confidence            6999999999433      34753         7899999999974  44555 6899887643110000111111111 


Q ss_pred             eEEeecCCeeEEEEEccCCceEEEEEEecccceEEEEE
Q 005236          117 FSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFT  154 (706)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~  154 (706)
                       .+.+........-.......-.+++|..|| +++.|.
T Consensus        67 -vl~d~~~~~iW~S~t~~~~~~~~~~L~~dG-Nlvly~  102 (110)
T 3r0e_B           67 -IIKDDDFKTIWSSRSSSKQGEYVLILQDDG-FGVIYG  102 (110)
T ss_dssp             -EEECTTCCEEEECCCCCSSSCCEEEECTTS-CEEEEC
T ss_pred             -EEEeCCCCEEEEcCCcCCCCCEEEEEcCCc-cEEEec
Confidence             112222223222222112223678999999 888774

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.33  E-value=0.00054  Score=72.13  Aligned_cols=141  Identities=19%  Similarity=0.269  Sum_probs=83.0

Q ss_pred             ceeccCCceeEEEEEeCC--------CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc-eeeeEeEEEeCCeeEEEEe
Q 005236          393 KKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN-LVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~e  463 (706)
                      +.|..|-...+|+....+        ++.+++|+.... ........+|..+++.+.-.+ ..++++.+.+    -+|||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            677778889999988742        468899886332 223456668999888874222 3566666533    29999


Q ss_pred             cCCCCChhhh-h----------------hccc--ccCCCC--HHHHHHHHHHHHH-------------------HHHH--
Q 005236          464 FMPNKSLDSF-I----------------FDQE--RCKLLD--WSKRFHIICGTAR-------------------GLLY--  501 (706)
Q Consensus       464 ~~~~gsL~~~-l----------------~~~~--~~~~l~--~~~~~~i~~~ia~-------------------~l~~--  501 (706)
                      |++|.+|..- +                +...  -.+...  +.++.++..++..                   .+..  
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9998776421 1                1100  011122  3444444433321                   1222  


Q ss_pred             --HHhC-CCCceEecccCCCcEEEcCC----CCeEEeeeccccc
Q 005236          502 --LHQD-SRLRIIHRDLKASNVLLDQD----MNPKISDFGLARA  538 (706)
Q Consensus       502 --LH~~-~~~~ivH~Dikp~Nill~~~----~~~kl~Dfgla~~  538 (706)
                        |... ....++|+|+.+.|||++.+    +.+.|+||..+..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence              2221 23469999999999999877    7899999998864

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.27  E-value=0.00057  Score=69.79  Aligned_cols=138  Identities=12%  Similarity=0.088  Sum_probs=76.5

Q ss_pred             cceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcce-eeeEeEEEeCCeeEEEEecC-CCCC
Q 005236          392 NKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL-VKLLGCCIHGEEKLLIYEFM-PNKS  469 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~-~~gs  469 (706)
                      .+.|+.|....+|+.     +.+++|+........ .....|+.+++.+...++ .++++.  ..+.-++|+||+ ++.+
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence            588999999999998     568888875432211 122457777776643233 455543  344567899999 6666


Q ss_pred             hhhhh------------------hcccc--cCCCC-HHHHHHHHH--------------HHHHHH----HHHHh-CCCCc
Q 005236          470 LDSFI------------------FDQER--CKLLD-WSKRFHIIC--------------GTARGL----LYLHQ-DSRLR  509 (706)
Q Consensus       470 L~~~l------------------~~~~~--~~~l~-~~~~~~i~~--------------~ia~~l----~~LH~-~~~~~  509 (706)
                      |....                  +....  ....+ +.....+..              .+.+.+    ..|.. ..+..
T Consensus        95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~  174 (301)
T 3dxq_A           95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA  174 (301)
T ss_dssp             CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred             CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence            54210                  11000  00001 111111100              011111    11111 22345


Q ss_pred             eEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          510 IIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       510 ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++|+|+.+.||+ ..++.+.|+||..+..
T Consensus       175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          175 ACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            899999999999 5667889999998764

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.24  E-value=0.0012  Score=71.30  Aligned_cols=74  Identities=15%  Similarity=0.115  Sum_probs=48.5

Q ss_pred             ceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcce-eeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          393 KKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL-VKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      +.|+.|-...+|+....+ +..+++|+......... .-..|..++..|...++ .++++.+  .+  .+||||++|.+|
T Consensus       114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l  188 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL  188 (458)
T ss_dssp             EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred             EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence            678889999999998865 47788887643221111 12578888888865555 5677665  22  359999998665


Q ss_pred             h
Q 005236          471 D  471 (706)
Q Consensus       471 ~  471 (706)
                      .
T Consensus       189 ~  189 (458)
T 2qg7_A          189 S  189 (458)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.22  E-value=0.0016  Score=67.36  Aligned_cols=141  Identities=13%  Similarity=0.067  Sum_probs=73.5

Q ss_pred             ceeccCCcee-EEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCC--cceeeeEeEEEeCCeeEEEEecCCCCC
Q 005236          393 KKLGEGGFGP-VYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH--RNLVKLLGCCIHGEEKLLIYEFMPNKS  469 (706)
Q Consensus       393 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~~gs  469 (706)
                      +.|+.|.... +|+....+++.+++|.......   +.+..|+.++..+..  -.+.+++.+..  ..-+++||++.+.+
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~--~~g~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEH--ARGLLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEET--TTTEEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecC--CCCEEEEeeCCCcc
Confidence            4565555444 6677654467777876543211   234556666666632  23455666532  22378999998877


Q ss_pred             hhhhhhccc-----------------------ccCCCCHHHHH-------HH-------------HHHHHHHHHHHH---
Q 005236          470 LDSFIFDQE-----------------------RCKLLDWSKRF-------HI-------------ICGTARGLLYLH---  503 (706)
Q Consensus       470 L~~~l~~~~-----------------------~~~~l~~~~~~-------~i-------------~~~ia~~l~~LH---  503 (706)
                      +.+++....                       ....++.....       .+             ...+...+..|.   
T Consensus        99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~  178 (333)
T 3csv_A           99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ  178 (333)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence            755442110                       00111111100       00             001112222221   


Q ss_pred             hCCCCceEecccCCCcEEEcCC----CCeEEeeeccccc
Q 005236          504 QDSRLRIIHRDLKASNVLLDQD----MNPKISDFGLARA  538 (706)
Q Consensus       504 ~~~~~~ivH~Dikp~Nill~~~----~~~kl~Dfgla~~  538 (706)
                      ......++|+|+++.|||++.+    +.+.|+||+.+..
T Consensus       179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            1224569999999999999875    6899999998865

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=97.20  E-value=0.0013  Score=55.82  Aligned_cols=97  Identities=9%  Similarity=0.121  Sum_probs=55.1

Q ss_pred             ccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCCCCCccccccccccCccee
Q 005236           38 DTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNF  117 (706)
Q Consensus        38 DtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w~g~~~s~~~~~~~~~~~~  117 (706)
                      +||+|||.|..    |  ..|+         .|.|.|.|+.+|+.  ++++...++|.++......-....+.....  +
T Consensus         2 ntL~~gq~L~~----g--~~L~---------~g~~~L~~q~dGnL--vly~~~~~vW~snt~~~~~~~~l~l~~dGN--L   62 (109)
T 3dzw_A            2 NILYSGETLSP----G--EFLN---------NGRYVFIMQEDCNL--VLYDVDKPIWATNTGGLDRRCHLSMQSDGN--L   62 (109)
T ss_dssp             CEEETTEEECT----T--CEEE---------ETTEEEEECTTSCE--EEEETTEEEEECCCTTSSSSCEEEECTTSC--E
T ss_pred             CCcCCCCEeCC----C--CEEE---------CCCEEEEEcCCCcE--EEEeCCEEEEECCcccCCCCEEEEEeCCCC--E
Confidence            69999999932    2  2352         69999999999974  455667899998764321000011111111  1


Q ss_pred             EEeecCCeeEEEEEccCCceEEEEEEecccceEEEEE
Q 005236          118 SFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFT  154 (706)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~  154 (706)
                      .+.+........-.........+++|..|| +++.|.
T Consensus        63 vl~~~~~~~~W~S~t~~~~~~~~~~L~ddG-Nlvly~   98 (109)
T 3dzw_A           63 VVYSPRNNPIWASNTGGENGNYVCVLQKDR-NVVIYG   98 (109)
T ss_dssp             EEECTTSCEEEECCCCCSSSCEEEEECTTS-CEEEEE
T ss_pred             EEECCCCCEEEECCCCCCCCCEEEEEeCCC-EEEEEC
Confidence            112222223332222223334689999999 887764

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.19  E-value=0.0027  Score=65.42  Aligned_cols=142  Identities=15%  Similarity=0.145  Sum_probs=82.2

Q ss_pred             ceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc--eeeeEeE-----EEeCCeeEEEEecC
Q 005236          393 KKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN--LVKLLGC-----CIHGEEKLLIYEFM  465 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lV~e~~  465 (706)
                      +.|+ |....||+....+|+.+++|...... ...+.+..|..++..+....  +++++..     ....+..++||||+
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            4566 88889999887777789999985321 12356667888877774222  3444432     22345567899999


Q ss_pred             CCCChhh----h----------hhccc------ccCCCCHHHH----HHH---------------HHHHHHHHHHHHh--
Q 005236          466 PNKSLDS----F----------IFDQE------RCKLLDWSKR----FHI---------------ICGTARGLLYLHQ--  504 (706)
Q Consensus       466 ~~gsL~~----~----------l~~~~------~~~~l~~~~~----~~i---------------~~~ia~~l~~LH~--  504 (706)
                      +|..+..    .          ++...      ....+++...    ..+               ...+.+.++.+..  
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9865431    1          11100      0111222211    000               1111122223322  


Q ss_pred             --CCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          505 --DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       505 --~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                        ..+..++|+|+++.|||++ + .+.|+||+.+..
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence              1244589999999999999 4 899999998754

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=97.19  E-value=0.0011  Score=56.66  Aligned_cols=97  Identities=7%  Similarity=0.105  Sum_probs=54.0

Q ss_pred             cccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeC--CceeeeeCCCCCCccccccccccCc
Q 005236           37 SDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKG--SRKFYRSGPWNGLRFSAATLRQNPV  114 (706)
Q Consensus        37 tDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~--~~~yw~sg~w~g~~~s~~~~~~~~~  114 (706)
                      .|||+|||.|..+      ..|+         .|.|.|.|+.+|+.  ++++.  ..+||.++......-....+.....
T Consensus         6 ~~tL~~gq~L~~g------~~L~---------~g~~~L~~q~dGNL--vL~~~~~~~~vWssnt~~~~~~~~l~l~~dGN   68 (113)
T 3mez_B            6 RNVLFSSQVMYDN------AQLA---------TRDYSLVMRDDCNL--VLTKGSKTNIVWESGTSGRGQHCFMRLGHSGE   68 (113)
T ss_dssp             SSEEETTCEEETT------CEEE---------ETTEEEEECTTSCE--EEEETTTTEEEEECCCTTSCSSCEEEECTTSC
T ss_pred             CCEeCCCCEECCC------CEeE---------cCCEEEEEcCCCEE--EEEECCCCEEEEECCcccCCcCEEEEEeCCCc
Confidence            5899999999433      2353         48999999999974  44554  5799998764211100011111111


Q ss_pred             ceeEEeecCCeeEEEEEccCCceEEEEEEecccceEEEE
Q 005236          115 FNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRF  153 (706)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~  153 (706)
                        +.+.+........-.......-.+++|..|| +++.|
T Consensus        69 --LVl~d~~~~~iW~S~t~~~~~~~~~~L~~dG-nlvly  104 (113)
T 3mez_B           69 --LDITDDRLNTVFVSNTVGQEGDYVLILQING-QAVVY  104 (113)
T ss_dssp             --EEEECTTSCEEEECSCCCSSSCCEEEECTTS-CEEEE
T ss_pred             --EEEECCCCCEEEECCCcCCCCCEEEEEcCCc-eEEEe
Confidence              1111222222222222112223689999999 88877

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=97.14  E-value=0.0027  Score=53.35  Aligned_cols=96  Identities=13%  Similarity=0.131  Sum_probs=56.6

Q ss_pred             ccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCCCCCcc-ccccccccCcce
Q 005236           38 DTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRF-SAATLRQNPVFN  116 (706)
Q Consensus        38 DtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w~g~~~-s~~~~~~~~~~~  116 (706)
                      |||+|||.|.    .|  .+|+|         |.|+|.|+.+|+  ++++....++|.++..+.... ....+.....  
T Consensus         2 n~L~~g~~L~----~g--~~L~s---------g~y~l~~q~DgN--Lvly~~~~~vW~ant~~~~~~~~~L~l~~dGn--   62 (105)
T 4h3o_A            2 NILDNNEGLY----AG--QSLDV---------EPYHFIMQDDCN--LVLYDHSTSTWASNTEIGGKSGCSAVLQSDGN--   62 (105)
T ss_dssp             CEECTTEEEC----TT--CEEEE---------TTEEEEECTTSC--EEEEETTEEEEECCCCCTTCCSCEEEECTTSC--
T ss_pred             CCcCCCCEEc----CC--CEEEE---------CCEEEEECCCCe--EEEEECCEEEEEecCCCCCCccEEEEEeCCcc--
Confidence            7899999993    23  35754         889999999998  566778889998876432211 1111111111  


Q ss_pred             eEEeecCCeeEEEEEccCCceEEEEEEecccceEEEE
Q 005236          117 FSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRF  153 (706)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~  153 (706)
                      +...+.......+........-.++.|..+| ++..|
T Consensus        63 LvL~d~~~~~vWss~t~~~~~~~~l~L~ddG-NlVly   98 (105)
T 4h3o_A           63 FVVYDSSGRSLWASHSTRGSGNYILILQDDG-NVIIY   98 (105)
T ss_dssp             EEEECTTCCEEEECCCCCCSSCEEEEECTTS-CEEEE
T ss_pred             EEEECCCcEEEEEecCCCCCCCEEEEEeCCC-eEEEE
Confidence            1122223333333333333334578899999 77766

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=97.14  E-value=0.00079  Score=57.08  Aligned_cols=35  Identities=23%  Similarity=0.562  Sum_probs=25.4

Q ss_pred             cCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCC
Q 005236           61 WKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPW   99 (706)
Q Consensus        61 w~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w   99 (706)
                      |.+.+....+.|.+.++++|+..++  .  .+.|.+++|
T Consensus        72 Wss~t~~~~~~~~~~L~~dGNlvly--~--~~~W~s~t~  106 (109)
T 3r0e_A           72 WKSGAQSVKGNYAAVVHPDGRLVVF--G--PSVFKIDPW  106 (109)
T ss_dssp             EECCCCCSSSCCEEEEETTTEEEEE--C--SEEEEECTT
T ss_pred             EcCCCcCCCcCEEEEEcCCCeEEEE--e--cCEECCCCc
Confidence            5554444456789999999985544  3  689999987

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.01  E-value=0.0011  Score=69.89  Aligned_cols=73  Identities=15%  Similarity=0.208  Sum_probs=44.3

Q ss_pred             ceeccCCceeEEEEEeCC---------CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc-eeeeEeEEEeCCeeEEEE
Q 005236          393 KKLGEGGFGPVYKGTLAD---------EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN-LVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~  462 (706)
                      +.|+.|....+|+....+         ++.+++|+....... ......|..+++.+...+ ..++++..  .  -++||
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~  113 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE  113 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence            577888889999998754         267888876543221 112356788877775333 34566543  2  37899


Q ss_pred             ecCCCCCh
Q 005236          463 EFMPNKSL  470 (706)
Q Consensus       463 e~~~~gsL  470 (706)
                      ||++|.++
T Consensus       114 e~i~G~~l  121 (369)
T 3c5i_A          114 EWLYGDPL  121 (369)
T ss_dssp             ECCCSEEC
T ss_pred             EEecCCcC
Confidence            99998654

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=96.96  E-value=0.0009  Score=65.60  Aligned_cols=82  Identities=20%  Similarity=0.267  Sum_probs=47.2

Q ss_pred             ceEEEEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCcccceeecC-------CceEEEecCCCCCCCCCceEEEE
Q 005236            4 LSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTG-------LERRITSWKSPDDPSPGNFTWAV   76 (706)
Q Consensus         4 ~~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~~~tg-------~~~~L~Sw~s~~dps~G~fsl~~   76 (706)
                      ...+.+...|||||++.     .+++|.+=....    .+-+|... ..|       .+.  +-|.|.+..+.|.|.+.+
T Consensus        27 ~f~l~f~~~gnl~ly~~-----~~~vW~an~~~~----~~~~l~l~-~dGnLvl~d~~~~--~vW~s~~~~~~~~~~~~l   94 (236)
T 1dlp_A           27 SFRFTMQSDCNLVLFDS-----DVRVWASNTAGA----TGCRAVLQ-SDGLLVILTAQNT--IRWSSGTKGSIGNYVLVL   94 (236)
T ss_dssp             TEEEEECTTSCEEEEES-----SSEEECCCCCSC----SCCBCCBC-SSSCBCCBCTTTC--CSCCCCCCCCSSCCEEEE
T ss_pred             CEEEEECCCCcEEEEEC-----CEEEEECCCCCC----CCeEEEEc-CCCcEEEEcCCCc--EEEeCCccccCCcEEEEE
Confidence            34455667777777764     257777643211    22222111 011       111  236666655678899999


Q ss_pred             eeCCCcceEEeeCCceeeeeCCCCC
Q 005236           77 ERQDNPELIMWKGSRKFYRSGPWNG  101 (706)
Q Consensus        77 ~~~g~~~~~~~~~~~~yw~sg~w~g  101 (706)
                      +.+|+..++  .  ..+|.|..+..
T Consensus        95 ~d~Gnlvl~--~--~~~W~S~~~p~  115 (236)
T 1dlp_A           95 QPDRTVTIY--G--PGLWDSGTSNK  115 (236)
T ss_dssp             CSSSCEEEE--C--SEEEECSCCCS
T ss_pred             eCCCCEEEe--c--CCEEECCCCCC
Confidence            999985443  2  28999887753

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=96.83  E-value=0.0021  Score=54.60  Aligned_cols=97  Identities=9%  Similarity=0.069  Sum_probs=53.2

Q ss_pred             cccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCCCCCccccccccccCcce
Q 005236           37 SDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFN  116 (706)
Q Consensus        37 tDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w~g~~~s~~~~~~~~~~~  116 (706)
                      +|||+|||.|..+      ..|         +.|.|.|.|+.+|+.  ++.+... +|.++......-....+.....+ 
T Consensus         2 ~~~l~~gq~L~~g------~~L---------~~g~~~L~~q~dGnL--vl~~~~~-vW~snt~~~~~~~~l~l~~dGNL-   62 (111)
T 3mez_A            2 NNVLLTGDVIHTD------NQL---------SYESAAFVMQGDCNL--VLYNEAG-GFQSNTHGRGVDCTLRLNNRGQL-   62 (111)
T ss_dssp             TTEEETTCEECTT------CEE---------EETTEEEEECTTSCE--EEECSSC-CEECCCTTSCSSCEEEECTTSCE-
T ss_pred             cCEeCCCCEeCCC------CEE---------ecCCEEEEEccCCeE--EEECCCC-EEECCcccCCcCEEEEEcCCCcE-
Confidence            5899999999432      235         469999999999975  4455555 99887532111000011111111 


Q ss_pred             eEEeecCC-eeEEEEEc--cCCceEEEEEEecccceEEEEE
Q 005236          117 FSFVSSED-ELYYTFDL--IDKAVFSRIVMNQTLYLRQRFT  154 (706)
Q Consensus       117 ~~~~~~~~-~~~~~~~~--~~~~~~~~~~l~~~G~~~~~~~  154 (706)
                       .+.+... .....-..  .......+++|..|| +++.|.
T Consensus        63 -Vl~~~~~~~~vW~S~t~~~~~~~~~~l~Lq~dG-Nlvly~  101 (111)
T 3mez_A           63 -EIHSANSNTPVWVYPRSVNTVRGNYAATLGPDQ-HVTIYG  101 (111)
T ss_dssp             -EEECSSCSSCSEEESSSCCCCSSCCEEEECTTS-CEEEEC
T ss_pred             -EEEeCCCCEEEEEeccccCCCCcCEEEEECCCC-eEEEec
Confidence             1111111 11222221  122235689999999 888774

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.73  E-value=0.0047  Score=64.06  Aligned_cols=32  Identities=25%  Similarity=0.366  Sum_probs=28.3

Q ss_pred             CCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       507 ~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      +..++|+|+.+.||++++++.+.|+||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            35699999999999999888999999988764

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=96.68  E-value=0.0067  Score=51.58  Aligned_cols=46  Identities=24%  Similarity=0.427  Sum_probs=34.9

Q ss_pred             cccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCC
Q 005236           37 SDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPW   99 (706)
Q Consensus        37 tDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w   99 (706)
                      ||||+|||.|..    |.  .|         ..|.|.|.++.+|+..  +++...++|.++..
T Consensus         1 tdtl~~gq~L~~----g~--~L---------~~~~~~L~~~~dgnlv--l~~~~~~vW~sn~~   46 (112)
T 1xd5_A            1 SDRLNSGHQLDT----GG--SL---------AEGGYLFIIQNDCNLV--LYDNNRAVWASGTN   46 (112)
T ss_dssp             CCEEETTEEECT----TC--EE---------EETTEEEEECTTSCEE--EEETTEEEEECCCT
T ss_pred             CCCCCCCCEECC----CC--EE---------eCCCEEEEEcCCCcEE--EEECCEEEEeCCCc
Confidence            799999999943    22  35         2588999999999754  45557899998764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.30  E-value=0.031  Score=52.93  Aligned_cols=103  Identities=13%  Similarity=0.070  Sum_probs=66.9

Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCccc
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN  547 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~  547 (706)
                      -+|.+.|...  ..++++.++|.++.|.+++|.-+-... .+ ..+=+.|..|+|..+|.+.+.+ ..+.          
T Consensus        33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------   97 (229)
T 2yle_A           33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAP-AADD----------   97 (229)
T ss_dssp             EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred             ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceeccc-cccc----------
Confidence            3788888543  367999999999999999988762211 01 1233457899999999988764 1110          


Q ss_pred             ccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCC
Q 005236          548 TNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKN  590 (706)
Q Consensus       548 ~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p  590 (706)
                          .....+.|||... ...+.+.=|||||++||.-+--..|
T Consensus        98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A           98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence                1123456888763 4567889999999999999875444

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=96.25  E-value=0.014  Score=49.76  Aligned_cols=46  Identities=22%  Similarity=0.393  Sum_probs=35.0

Q ss_pred             cccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCC
Q 005236           37 SDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPW   99 (706)
Q Consensus        37 tDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w   99 (706)
                      .|||+|||.|..+      ..|+         .|.|.|.++.+|+..  +++...++|.++..
T Consensus         2 ~dtl~~gq~L~~g------~~L~---------~g~~~L~~~~dgnlv--ly~~~~~vW~sn~~   47 (115)
T 2dpf_A            2 DNVLLSGQTLHAD------HSLQ---------AGAYTLTIQNKCNLV--KYQNGRQIWASNTD   47 (115)
T ss_dssp             CCEEETTCEEETT------EEEE---------ETTEEEEECTTSCEE--EEETTEEEEECSCT
T ss_pred             CCEeCCCCEECCC------CEEE---------CCCEEEEEcCCCcEE--EEeCCEEEEeCCCC
Confidence            4899999999432      2364         589999999998754  44567899998764

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=96.11  E-value=0.012  Score=49.32  Aligned_cols=71  Identities=20%  Similarity=0.247  Sum_probs=44.8

Q ss_pred             eEEEEecCCcEEEEecCCCCCceEEEeecCC-CcccccCCCccccee------ecCCceEEEecCCCCCCCCCceEEEEe
Q 005236            5 SFLFVCYSGNLVLRGERDGGSETYLWQSFDY-PSDTLLPGMKLGWDL------KTGLERRITSWKSPDDPSPGNFTWAVE   77 (706)
Q Consensus         5 ~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~-PtDtlLpgqklg~~~------~tg~~~~L~Sw~s~~dps~G~fsl~~~   77 (706)
                      -.+.|.++|||||++.+     +++|.|--+ |-.   .+-+|....      ..+.+.  +-|.|.+....+.+.+.++
T Consensus        21 y~l~~q~DgNLvly~~~-----~~vW~ant~~~~~---~~~~L~l~~dGnLvL~d~~~~--~vWss~t~~~~~~~~l~L~   90 (105)
T 4h3o_A           21 YHFIMQDDCNLVLYDHS-----TSTWASNTEIGGK---SGCSAVLQSDGNFVVYDSSGR--SLWASHSTRGSGNYILILQ   90 (105)
T ss_dssp             EEEEECTTSCEEEEETT-----EEEEECCCCCTTC---CSCEEEECTTSCEEEECTTCC--EEEECCCCCCSSCEEEEEC
T ss_pred             EEEEECCCCeEEEEECC-----EEEEEecCCCCCC---ccEEEEEeCCccEEEECCCcE--EEEEecCCCCCCCEEEEEe
Confidence            45889999999999742     799999643 311   112221110      011111  3477777777888999999


Q ss_pred             eCCCcceE
Q 005236           78 RQDNPELI   85 (706)
Q Consensus        78 ~~g~~~~~   85 (706)
                      ++|+..++
T Consensus        91 ddGNlVly   98 (105)
T 4h3o_A           91 DDGNVIIY   98 (105)
T ss_dssp             TTSCEEEE
T ss_pred             CCCeEEEE
Confidence            99986443

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=95.84  E-value=0.013  Score=62.40  Aligned_cols=141  Identities=16%  Similarity=0.174  Sum_probs=83.5

Q ss_pred             cceeccCCceeEEEEEeCC--------CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcc-eeeeEeEEEeCCeeEEEE
Q 005236          392 NKKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRN-LVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~  462 (706)
                      .+.|..|-...+|+....+        ++.+++++....... .-.-.+|..+++.+...+ ..++++.+  .  -++||
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence            3677788889999998753        578898886443221 112356777777774323 34555432  2  37899


Q ss_pred             ecCCCCChhhh-h----------------hccc----------ccCCCCHHHHHHHHHHH-------------------H
Q 005236          463 EFMPNKSLDSF-I----------------FDQE----------RCKLLDWSKRFHIICGT-------------------A  496 (706)
Q Consensus       463 e~~~~gsL~~~-l----------------~~~~----------~~~~l~~~~~~~i~~~i-------------------a  496 (706)
                      ||++|.+|..- +                +...          ...+.-+..+.++..++                   .
T Consensus       150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~  229 (424)
T 3mes_A          150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL  229 (424)
T ss_dssp             ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred             EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence            99999775321 0                1100          00111233333333222                   1


Q ss_pred             HHHHHHH---------------------hCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          497 RGLLYLH---------------------QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       497 ~~l~~LH---------------------~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ..+..|.                     ...+..++|+|+.+.||+ +.++.+.|+||..+..
T Consensus       230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            2223322                     112346899999999999 8888999999998864

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=95.26  E-value=0.17  Score=43.20  Aligned_cols=48  Identities=4%  Similarity=0.048  Sum_probs=36.6

Q ss_pred             cccccCCCcccceeecCCceEEE--ecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCC
Q 005236           37 SDTLLPGMKLGWDLKTGLERRIT--SWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPW   99 (706)
Q Consensus        37 tDtlLpgqklg~~~~tg~~~~L~--Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w   99 (706)
                      +|||.||+.|.    .|+  .|+  |       ..|.|.|.+..+|+.  ++++...+.|.++..
T Consensus         8 ~~~l~~g~~L~----~g~--~l~~~S-------~~g~~~L~~~~dgnl--vly~~~~~vW~sn~~   57 (119)
T 1b2p_A            8 QPDDNHPQILH----ATE--SLEILF-------GTHVYRFIMQTDCNL--VLYDNNNPIWATNTG   57 (119)
T ss_dssp             CSSSCCCCEEE----TTC--EEEEEE-------TTEEEEEEECTTSCE--EEEETTEEEEECCCT
T ss_pred             CcccCCCCEEc----CCC--EEEEeC-------CCCCEEEEEecCCCE--EEEECCEEEEeCCCc
Confidence            58999999993    343  476  5       578999999999874  455667889988753

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=94.48  E-value=0.24  Score=41.59  Aligned_cols=47  Identities=11%  Similarity=0.141  Sum_probs=34.7

Q ss_pred             cccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCC
Q 005236           37 SDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPW   99 (706)
Q Consensus        37 tDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w   99 (706)
                      ||||.+||.|..    |.  .|++        .|.|.|.|+.+|+.  ++++...+.|.++..
T Consensus         1 ~d~l~~g~~L~~----g~--~l~~--------~~~~~l~~~~dGnl--vl~~~~~~vW~sn~~   47 (110)
T 3a0c_A            1 VNSLSSPNSLFT----GH--SLEV--------GPSYRLIMQGDCNF--VLYDSGKPVWASNTG   47 (110)
T ss_dssp             CCEEETTCEECT----TC--EEEE--------TTTEEEEECTTSCE--EEEETTEEEEECCCT
T ss_pred             CCEeCCCCEECC----CC--EEEE--------CCCEEEEEcCCCcE--EEEECCEEEEECCCC
Confidence            799999999932    32  3531        57899999999975  455667899988753

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=93.75  E-value=0.21  Score=52.84  Aligned_cols=30  Identities=23%  Similarity=0.375  Sum_probs=25.5

Q ss_pred             ceEecccCCCcEEE------cCCCCeEEeeeccccc
Q 005236          509 RIIHRDLKASNVLL------DQDMNPKISDFGLARA  538 (706)
Q Consensus       509 ~ivH~Dikp~Nill------~~~~~~kl~Dfgla~~  538 (706)
                      .++|+|+.+.|||+      +++..++++||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            46799999999999      4567899999998864

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=89.29  E-value=0.75  Score=45.62  Aligned_cols=80  Identities=13%  Similarity=0.106  Sum_probs=47.0

Q ss_pred             eEEEEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCccccee------ecCCceEEEecCCCCCCCCCceEEEEee
Q 005236            5 SFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDL------KTGLERRITSWKSPDDPSPGNFTWAVER   78 (706)
Q Consensus         5 ~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~~------~tg~~~~L~Sw~s~~dps~G~fsl~~~~   78 (706)
                      -.+.|.++|||||++..    +.++|+|=..-.+.    ..+..+.      ..+.+.  .-|.+.+... +.+.+.++.
T Consensus       166 fsl~l~~dGnlvLy~~~----~~~yW~Sgt~~~~~----~~l~l~~dGnLvl~d~~~~--~vWsS~t~~~-~~~rl~Ld~  234 (276)
T 3m7h_A          166 SKLVFQGDGNLVAYGPN----GAATWNAGTQGKGA----VRAVFQGDGNLVVYGAGNA--VLWHSHTGGH-ASAVLRLQA  234 (276)
T ss_dssp             EEEEECTTSCEEEECTT----SSEEEECCCTTTTC----CEEEECTTSCEEEECTTSC--EEEECSCTTC-TTCEEEECT
T ss_pred             EEEeecCCceEEEEeCC----CeEEEECCCCCCcc----EEEEEcCCCeEEEEeCCCc--EEEEecCCCC-CCEEEEEcC
Confidence            35788899999998542    37899984332221    1221110      011111  2355554433 347899999


Q ss_pred             CCCcceEEeeCCceeeeeCC
Q 005236           79 QDNPELIMWKGSRKFYRSGP   98 (706)
Q Consensus        79 ~g~~~~~~~~~~~~yw~sg~   98 (706)
                      +|+..++.|   ...|.+..
T Consensus       235 dGnLvly~~---~~~Wqsf~  251 (276)
T 3m7h_A          235 NGSIAILDE---KPVWARFG  251 (276)
T ss_dssp             TSCEEEEEE---EEEEESSS
T ss_pred             CccEEEEcC---CCeEEccC
Confidence            999888877   47787753

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=87.72  E-value=1.5  Score=41.43  Aligned_cols=116  Identities=12%  Similarity=0.105  Sum_probs=79.6

Q ss_pred             cCCcceeeeEeEEEeCCeeEEEEecCCCC-ChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCC
Q 005236          440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNK-SLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKAS  518 (706)
Q Consensus       440 l~h~niv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~  518 (706)
                      ..||+++.. .+-.+.+...+.|+.-+.+ ++.. +      ...+...+++++.+|+....+++.     -+|--|+|.
T Consensus        42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~  108 (215)
T 4ann_A           42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD  108 (215)
T ss_dssp             SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred             ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence            368888876 4555666666666654422 2222 2      347788999999999998866653     478899999


Q ss_pred             cEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 005236          519 NVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRG  592 (706)
Q Consensus       519 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~  592 (706)
                      ||+++.++.++|.=.|+-..                   ++|.     ..+...=.-.+=+++..+++++..|+
T Consensus       109 NL~f~~~~~p~i~~RGik~~-------------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          109 ELFFTRDGLPIAKTRGLQNV-------------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             GEEECTTSCEEESCCEETTT-------------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             eEEEcCCCCEEEEEccCccC-------------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            99999999999986665332                   2222     12233334567788999999988864

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=81.95  E-value=2.7  Score=39.80  Aligned_cols=116  Identities=8%  Similarity=0.047  Sum_probs=77.1

Q ss_pred             cCCcceeeeEeEEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHH-HHHhCCCCceEecccCCC
Q 005236          440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL-YLHQDSRLRIIHRDLKAS  518 (706)
Q Consensus       440 l~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~Dikp~  518 (706)
                      ..||++  -...-.+++...+.++--+++.=...+      ..++...+++++.+|+.... +++.     -+|--|+|+
T Consensus        47 ~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~  113 (219)
T 4ano_A           47 EVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE  113 (219)
T ss_dssp             GSCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred             ccCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence            368888  333345677777777765443222233      23678889999988888766 5543     688899999


Q ss_pred             cEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 005236          519 NVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRG  592 (706)
Q Consensus       519 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~  592 (706)
                      ||+++.++.++|.=.|+-.                   -++|.-     .+..-=.-.+=+++..++.++..|+
T Consensus       114 NL~f~~~~~p~i~hRGi~~-------------------~lpP~e-----~~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          114 NLMFNRALEPFFLHVGVKE-------------------SLPPDE-----WDDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             GEEECTTCCEEESCCEETT-------------------TBSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             eEEEeCCCcEEEEEcCCcc-------------------cCCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            9999999999998666532                   233322     1222234467788888888887753

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=81.85  E-value=0.21  Score=53.85  Aligned_cols=62  Identities=16%  Similarity=0.214  Sum_probs=19.0

Q ss_pred             CccceeccCCceeEEEEEeCC-CcEEEE------EEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe
Q 005236          390 SINKKLGEGGFGPVYKGTLAD-EQEIAV------KRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH  454 (706)
Q Consensus       390 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  454 (706)
                      .+.++||   ||.||+|.+.. ..+|||      |....  ...+....+.+|..++..++|||+++.+++...
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            4456777   99999999864 367888      66543  233344568889999999999999999887654

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=81.13  E-value=0.84  Score=36.05  Aligned_cols=46  Identities=17%  Similarity=0.330  Sum_probs=34.9

Q ss_pred             cCCCCccCCCCCCCccccC--CCCCcccccCCcccCCCCCccccCceeeccCcccc
Q 005236          169 PRDLCDTYALCGDYGICII--SDLPVCQCLKGFKPKSRGYVDWSQGCVRDKSLNYS  222 (706)
Q Consensus       169 p~~~C~~~~~CG~~g~C~~--~~~~~C~C~~Gf~~~~~~~~~~s~gC~~~~~~~c~  222 (706)
                      +.+.| ++..|+.|+.|-.  +....|+|+.||...       ...|+++...+|.
T Consensus         3 ~~h~C-~~tkcp~NA~Cyr~~dg~EecRCllnykk~-------~~kCV~~~~~~C~   50 (95)
T 1b9w_A            3 SEHRC-IDTNVPENAACYRYLDGTEEWRCLLYFKED-------AGKCVPAPNMTCK   50 (95)
T ss_dssp             GGGSC-SSCCCCTTEEEEECTTSCEEEEECTTEEEE-------TTEEEECTTCCTT
T ss_pred             cCccc-ccCCCCCCcCeEEEcCCCEEEEEECCeEec-------CCEEEcCCCCCcc
Confidence            34678 6779999999943  456799999999963       4568877777665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	706
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-73
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-66
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-66
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-65
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	8e-63
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	9e-63
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-62
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-62
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-61
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-61
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-61
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	9e-61
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-60
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-60
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-60
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-60
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-59
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-59
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-59
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-59
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-59
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-59
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-58
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-57
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-57
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-57
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-57
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-56
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-55
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-53
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-53
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-52
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-52
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-50
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-46
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-46
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-46
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-46
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-46
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-45
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	9e-45
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	9e-44
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	9e-44
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-43
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-42
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-41
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-41
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-41
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-40
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-40
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-39
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-39
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-39
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-38
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-37
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-36
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-35
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-33
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-33
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-31
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-30
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-28
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-23

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  235 bits (601), Expect = 6e-73
 Identities = 70/277 (25%), Positives = 133/277 (48%), Gaps = 20/277 (7%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
              ++ +++G G FG VYKG    +  + +  ++  + Q L+  KNE+ +  K +H N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
             +G     +   ++ ++    SL   +   E     +  K   I   TA+G+ YLH  S
Sbjct: 68  LFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS 124

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA--- 563
              IIHRDLK++N+ L +D+  KI DFGLA             ++ G+  +MAPE     
Sbjct: 125 ---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF 623
               +S +SDV++FGI+L E+++G+    + + +N+  +I    + +     S++   C 
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIFMVGRGYLSPDLSKVRSNCP 239

Query: 624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
           K             +   C+++  ++RP  P ++  +
Sbjct: 240 KA---------MKRLMAECLKKKRDERPLFPQILASI 267

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  218 bits (557), Expect = 1e-66
 Identities = 78/274 (28%), Positives = 125/274 (45%), Gaps = 22/274 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           +   + ++LG G FG V+ G      ++AVK L +           E  L  +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLV 71

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   +I E+M N SL  F+      K L  +K   +    A G+ ++ + +
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERN 129

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
               IHRDL+A+N+L+   ++ KI+DFGLAR    +E             + APE  + G
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFPIKWTAPEAINYG 185

Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
            F++KSDV+SFGILL EIV+  +    Y       +I++  + +    P    +      
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRI--PYPGMTNPEVIQNLERGYRMVRPDNCPE------ 237

Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
                      +  LC ++ PEDRP    +  +L
Sbjct: 238 -------ELYQLMRLCWKERPEDRPTFDYLRSVL 264

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  216 bits (551), Expect = 6e-66
 Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 24/275 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
              +  +++G G FG V+ G   ++ ++A+K + +      ++   E  +  KL H  LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L G C+      L++EFM +  L    + + +  L        +      G+ YL +  
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSD--YLRTQRGLFAAETLLGMCLDVCEGMAYLEE-- 119

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
              +IHRDL A N L+ ++   K+SDFG+ R    D+   ++        + +PE  S  
Sbjct: 120 -ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFS 177

Query: 567 QFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD 625
           ++S KSDV+SFG+L+ E+ S GK       +   +  I   ++L+   + S         
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST-------- 229

Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
                       I   C ++ PEDRP    ++  L
Sbjct: 230 --------HVYQIMNHCWKERPEDRPAFSRLLRQL 256

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  214 bits (547), Expect = 4e-65
 Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 23/288 (7%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
           ++  +  KLG+G FG V+ GT      +A+K L        +    E  +  KL+H  LV
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 75

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L       E   ++ E+M   SL  F+   E  K L   +   +    A G+ Y+ +  
Sbjct: 76  QLYAVVSE-EPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLVDMAAQIASGMAYVER-- 131

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
            +  +HRDL+A+N+L+ +++  K++DFGLAR    +E             + APE A  G
Sbjct: 132 -MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYG 189

Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
           +F++KSDV+SFGILL E+ +  +    Y       ++    + +    P +  +      
Sbjct: 190 RFTIKSDVWSFGILLTELTTKGRV--PYPGMVNREVLDQVERGYRMPCPPECPE------ 241

Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPK-QPG 673
                      +   C ++ PE+RP    +   L       +P+ QPG
Sbjct: 242 -------SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 282

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (529), Expect = 8e-63
 Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 22/274 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
            + +  K+LG G FG V  G    + ++A+K + +       E   E  +   L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLV 62

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +L G C       +I E+M N  L +++ +          +   +       + YL    
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK- 119

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
             + +HRDL A N L++     K+SDFGL+R    DE   +         +  PE     
Sbjct: 120 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG-SKFPVRWSPPEVLMYS 176

Query: 567 QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS 626
           +FS KSD+++FG+L+ EI S                 +  ++ +     ++ I    +  
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLG---------------KMPYERFTNSETAEHIAQGLRLY 221

Query: 627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
                  +   I   C  +  ++RP    ++  +
Sbjct: 222 RPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 255

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  209 bits (534), Expect = 9e-63
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 11/206 (5%)

Query: 385 ATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQH 442
             D+F    +LG G  G V+K +       +A K +   I      ++  E+ +  +   
Sbjct: 4   KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +V   G      E  +  E M   SLD  +    R   +       +     +GL YL
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYL 120

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
               + +I+HRD+K SN+L++     K+ DFG++        +   N  VGT  YM+PE 
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSPER 174

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGK 588
                +SV+SD++S G+ L+E+  G+
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (529), Expect = 3e-62
 Identities = 63/296 (21%), Positives = 114/296 (38%), Gaps = 28/296 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
               + + +G+G FG V++G     +E+AVK  S   E+     + EI     L+H N++
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENIL 60

Query: 447 KLLGCCIHGEEKL----LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             +              L+ ++  + SL  ++        +       +   TA GL +L
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHL 116

Query: 503 HQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNTNRVVGTY 555
           H +      +  I HRDLK+ N+L+ ++    I+D GLA       D  +   N  VGT 
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176

Query: 556 GYMAPEYASD------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN----KLNLIRH 605
            YMAPE   D       +   ++D+++ G++  EI       G +         L     
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236

Query: 606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIH-IGLLCVQQYPEDRPCMPSVILML 660
           + +   + +  Q +     + +   E +R +  I   C       R     +   L
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  207 bits (528), Expect = 4e-62
 Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 46/311 (14%)

Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSK-ISEQGLKEL 430
           +L ++    +N    + +GEG FG V++              +AVK L +  S     + 
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 431 KNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL-------- 482
           + E  L ++  + N+VKLLG C  G+   L++E+M    L+ F+       +        
Sbjct: 64  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123

Query: 483 -------------LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPK 529
                        L  +++  I    A G+ YL +    + +HRDL   N L+ ++M  K
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVK 180

Query: 530 ISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKK 589
           I+DFGL+R     +             +M PE     +++ +SDV+++G++L EI S   
Sbjct: 181 IADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 240

Query: 590 NRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPED 649
               Y+      +I +      +G      + C          +   ++  LC  + P D
Sbjct: 241 Q--PYYGMAHEEVIYY----VRDGNILACPENC---------PLELYNLMRLCWSKLPAD 285

Query: 650 RPCMPSVILML 660
           RP   S+  +L
Sbjct: 286 RPSFCSIHRIL 296

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (523), Expect = 3e-61
 Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 28/277 (10%)

Query: 392 NKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKISEQG-LKELKNEIILFSKLQHRNLV 446
           N+ +G G FG VY GTL D    +   AVK L++I++ G + +   E I+     H N++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 447 KLLGCCIHGEEK-LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
            LLG C+  E   L++  +M +  L +FI ++     +     F +          +   
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-----MKFL 146

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR--VVGTYGYMAPEYA 563
           +  + +HRDL A N +LD+    K++DFGLAR     E +   N+        +MA E  
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 206

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF 623
              +F+ KSDV+SFG+LL E+++       Y   N  ++  +  +      P    D   
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVYLLQGRRLLQPEYCPD--- 261

Query: 624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
                         + L C     E RP    ++  +
Sbjct: 262 ----------PLYEVMLKCWHPKAEMRPSFSELVSRI 288

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  203 bits (517), Expect = 5e-61
 Identities = 69/275 (25%), Positives = 110/275 (40%), Gaps = 28/275 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV 446
               + + +G+G FG V  G      ++AVK +    +   +    E  + ++L+H NLV
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLV 63

Query: 447 KLLGCCIHGEEKL-LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           +LLG  +  +  L ++ E+M   SL  ++  + R  +L               + YL   
Sbjct: 64  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLE-- 120

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
                +HRDL A NVL+ +D   K+SDFGL +     +  G          + APE   +
Sbjct: 121 -GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-----LPVKWTAPEALRE 174

Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD 625
            +FS KSDV+SFGILL EI S  +    Y      +++        +G      D C   
Sbjct: 175 KKFSTKSDVWSFGILLWEIYSFGRV--PYPRIPLKDVVPR----VEKGYKMDAPDGCPPA 228

Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
                       +   C       RP    +   L
Sbjct: 229 ---------VYEVMKNCWHLDAAMRPSFLQLREQL 254

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (519), Expect = 5e-61
 Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 27/282 (9%)

Query: 385 ATDNFSI-NKKLGEGGFGPVYKGTLA---DEQEIAVKRLSKISEQG-LKELKNEIILFSK 439
             DN  I + +LG G FG V +G       + ++A+K L + +E+   +E+  E  +  +
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           L +  +V+L+G C   E  +L+ E      L  F+  +     +  S    ++   + G+
Sbjct: 66  LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREE--IPVSNVAELLHQVSMGM 122

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGN-TNRVVGTYGYM 558
            YL +      +HRDL A NVLL      KISDFGL++A G D++     +       + 
Sbjct: 123 KYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 179

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE  +  +FS +SDV+S+G+ + E +S  +    Y       ++        +G   + 
Sbjct: 180 APECINFRKFSSRSDVWSYGVTMWEALSYGQK--PYKKMKGPEVMA----FIEQGKRMEC 233

Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
              C  +            +   C     EDRP   +V   +
Sbjct: 234 PPECPPE---------LYALMSDCWIYKWEDRPDFLTVEQRM 266

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (521), Expect = 9e-61
 Identities = 77/306 (25%), Positives = 118/306 (38%), Gaps = 45/306 (14%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKISEQG-LKELKNEIILFSK 439
           +N    K LG G FG V   T           ++AVK L + ++    + L +E+ + ++
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQ--------------------E 478
           L  H N+V LLG C       LI+E+     L +++  +                    E
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156

Query: 479 RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA 538
              +L +          A+G+ +L        +HRDL A NVL+      KI DFGLAR 
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARD 213

Query: 539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDN 598
              D              +MAPE   +G +++KSDV+S+GILL EI S      +     
Sbjct: 214 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV-NPYPGIPV 272

Query: 599 KLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL 658
             N     +KL   G          ++            I   C       RP  P++  
Sbjct: 273 DANF----YKLIQNGFKMDQPFYATEE---------IYIIMQSCWAFDSRKRPSFPNLTS 319

Query: 659 MLGSEI 664
            LG ++
Sbjct: 320 FLGCQL 325

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  203 bits (518), Expect = 1e-60
 Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 37/301 (12%)

Query: 377 FELATIANATDNFS---------INKKLGEGGFGPVYKGTLA----DEQEIAVKRLSK-I 422
           F       A   F+         I + +G G FG V  G L      E  +A+K L    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 423 SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL 482
           +E+  ++  +E  +  +  H N++ L G        ++I EFM N SLD   F ++    
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD--SFLRQNDGQ 124

Query: 483 LDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD 542
               +   ++ G A G+ YL     +  +HRDL A N+L++ ++  K+SDFGL+R    D
Sbjct: 125 FTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 181

Query: 543 ETEGNTNRVVG---TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK 599
            ++      +G      + APE     +F+  SDV+S+GI++ E++S  +    Y     
Sbjct: 182 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER--PYWDMTN 239

Query: 600 LNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM 659
            ++I               I+  ++    +        + L C Q+    RP    ++  
Sbjct: 240 QDVI-------------NAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286

Query: 660 L 660
           L
Sbjct: 287 L 287

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  203 bits (517), Expect = 1e-60
 Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 22/275 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
            + ++  KLG G +G VY+G        +AVK L +     ++E   E  +  +++H NL
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 75

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V+LLG C       +I EFM   +L  ++ +  R + +      ++    +  + YL   
Sbjct: 76  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLE-- 132

Query: 506 SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASD 565
            +   IHRDL A N L+ ++   K++DFGL+R   GD    +         + APE  + 
Sbjct: 133 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAY 190

Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD 625
            +FS+KSDV++FG+LL EI +   +   Y   +    +   ++L  +    +  + C + 
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMS--PYPGID----LSQVYELLEKDYRMERPEGCPEK 244

Query: 626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
                       +   C Q  P DRP    +    
Sbjct: 245 ---------VYELMRACWQWNPSDRPSFAEIHQAF 270

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (514), Expect = 2e-60
 Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 23/273 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRN 444
           +++ + + LGEG +G V        E+ +AVK +    +    + +K EI +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VK  G    G  + L  E+     L   I        +              G++YLH 
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG 121

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYAS 564
              + I HRD+K  N+LLD+  N KISDFGLA  F  +  E   N++ GT  Y+APE   
Sbjct: 122 ---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178

Query: 565 DGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF 623
             +F +   DV+S GI+L  +++G+    +    +         +      P + ID+  
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELP--WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP 236

Query: 624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSV 656
                   ++         + + P  R  +P +
Sbjct: 237 LA------LLHK------ILVENPSARITIPDI 257

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  201 bits (513), Expect = 7e-60
 Identities = 75/301 (24%), Positives = 113/301 (37%), Gaps = 40/301 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKISEQG-LKELKNEIILFSK 439
           +  S  K LG G FG V + T            +AVK L   +     + L +E+ + S 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 440 L-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL---------------L 483
           L  H N+V LLG C  G   L+I E+     L +F+  +    +               L
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
           D           A+G+ +L        IHRDL A N+LL      KI DFGLAR    D 
Sbjct: 143 DLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199

Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
                        +MAPE   +  ++ +SDV+S+GI L E+ S   +       +     
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS---- 255

Query: 604 RHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE 663
              +K+  EG      +    +            I   C    P  RP    ++ ++  +
Sbjct: 256 -KFYKMIKEGFRMLSPEHAPAE---------MYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

Query: 664 I 664
           I
Sbjct: 306 I 306

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  201 bits (512), Expect = 1e-59
 Identities = 73/292 (25%), Positives = 117/292 (40%), Gaps = 39/292 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD---EQEIAVKRLSKI-SEQGLKELKNEIILFSKL-Q 441
           ++      +GEG FG V K  +       + A+KR+ +  S+   ++   E+ +  KL  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFI-------------FDQERCKLLDWSKR 488
           H N++ LLG C H     L  E+ P+ +L  F+                     L   + 
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
            H     ARG+ YL Q    + IHRDL A N+L+ ++   KI+DFGL+R     E     
Sbjct: 130 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQ---EVYVKK 183

Query: 549 NRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK 608
                   +MA E  +   ++  SDV+S+G+LL EIVS       Y       L     +
Sbjct: 184 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT--PYCGMTCAELYEKLPQ 241

Query: 609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
            +    P    D                 +   C ++ P +RP    +++ L
Sbjct: 242 GYRLEKPLNCDD-------------EVYDLMRQCWREKPYERPSFAQILVSL 280

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (508), Expect = 1e-59
 Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 26/279 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHR 443
           +++ +   +G G +G   K    +D + +  K L    ++E   + L +E+ L  +L+H 
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 444 NLVKLLGCCIHGEEKLL--IYEFMPNKSLDSFIFDQERCK-LLDWSKRFHIICGTARGLL 500
           N+V+     I      L  + E+     L S I    + +  LD      ++      L 
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123

Query: 501 YLHQ--DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
             H+  D    ++HRDLK +NV LD   N K+ DFGLAR    D +       VGT  YM
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKAFVGTPYYM 181

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           +PE  +   ++ KSD++S G LL E+ +       + + ++  L     +     +P + 
Sbjct: 182 SPEQMNRMSYNEKSDIWSLGCLLYELCALMP---PFTAFSQKELAGKIREGKFRRIPYRY 238

Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
                  S  L E+I         +      RP +  ++
Sbjct: 239 -------SDELNEIITR------MLNLKDYHRPSVEEIL 264

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  200 bits (510), Expect = 2e-59
 Identities = 73/288 (25%), Positives = 126/288 (43%), Gaps = 34/288 (11%)

Query: 373 DLPLFELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK---ISEQGLK 428
           D  + EL    +    FS  +++G G FG VY    + + + +A+K++S     S +  +
Sbjct: 1   DPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ 60

Query: 429 ELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKR 488
           ++  E+    KL+H N ++  GC +      L+ E+    + D     ++    L   + 
Sbjct: 61  DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP---LQEVEI 117

Query: 489 FHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT 548
             +  G  +GL YLH      +IHRD+KA N+LL +    K+ DFG A            
Sbjct: 118 AAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APA 168

Query: 549 NRVVGTYGYMAPEYA---SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRH 605
           N  VGT  +MAPE      +GQ+  K DV+S GI  +E+      +    + N ++ + H
Sbjct: 169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER---KPPLFNMNAMSALYH 225

Query: 606 AWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM 653
             +  +  + S      F++                C+Q+ P+DRP  
Sbjct: 226 IAQNESPALQSGHWSEYFRN------------FVDSCLQKIPQDRPTS 261

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (508), Expect = 3e-59
 Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 27/276 (9%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGTLADEQEI-AVKRLSKISEQGLKELKNEIILFSKLQH 442
           N  D + I  +LG+G FG VYK    +   + A K +   SE+ L++   EI + +   H
Sbjct: 9   NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 68

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+VKLL    +     ++ EF    ++D+ + + ER   L  S+   +   T   L YL
Sbjct: 69  PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYL 126

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     +IIHRDLKA N+L   D + K++DFG++          ++   +GT  +MAPE 
Sbjct: 127 HD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEV 181

Query: 563 A-----SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
                  D  +  K+DV+S GI L+E+   +     +H  N + ++    K+     P+ 
Sbjct: 182 VMCETSKDRPYDYKADVWSLGITLIEMAEIEP---PHHELNPMRVLL---KIAKSEPPTL 235

Query: 618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM 653
              + +  S N  + ++       C+++  + R   
Sbjct: 236 AQPSRW--SSNFKDFLKK------CLEKNVDARWTT 263

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  198 bits (505), Expect = 3e-59
 Identities = 72/278 (25%), Positives = 116/278 (41%), Gaps = 34/278 (12%)

Query: 392 NKKLGEGGFGPVYKGTLADE---QEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLV 446
           +K+LG G FG V KG    +   + +AVK L           EL  E  +  +L +  +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
           +++G C   E  +L+ E      L+ ++        +       ++   + G+ YL +  
Sbjct: 72  RMIGICEA-ESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEES- 126

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTN-RVVGTYGYMAPEYASD 565
               +HRDL A NVLL      KISDFGL++A   DE              + APE  + 
Sbjct: 127 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184

Query: 566 GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK--LNLIRHAWKL-WNEGMPSQLIDAC 622
            +FS KSDV+SFG+L+ E  S  + + +          ++    ++    G P ++ D  
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD-- 241

Query: 623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
                          +  LC     E+RP   +V L L
Sbjct: 242 ---------------LMNLCWTYDVENRPGFAAVELRL 264

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  198 bits (503), Expect = 7e-59
 Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 27/288 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD-----EQEIAVKRLSK-ISEQGLKELKNEIILFSKL 440
              +  K +G G FG VYKG L       E  +A+K L    +E+   +   E  +  + 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 441 QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLL 500
            H N+++L G     +  ++I E+M N +LD F+ +++        +   ++ G A G+ 
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE--FSVLQLVGMLRGIAAGMK 124

Query: 501 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGYMA 559
           YL     +  +HRDL A N+L++ ++  K+SDFGL+R    D     T +       + A
Sbjct: 125 YLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181

Query: 560 PEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI 619
           PE  S  +F+  SDV+SFGI++ E+++  +   +  S++++                + I
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV---------------MKAI 226

Query: 620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLP 667
           +  F+    +        + + C QQ    RP    ++ +L   I  P
Sbjct: 227 NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (500), Expect = 6e-58
 Identities = 73/319 (22%), Positives = 130/319 (40%), Gaps = 30/319 (9%)

Query: 382 IANATDNFSINKKLGEGGFGPVYKGTLADEQE-----IAVKRLSKI-SEQGLKELKNEII 435
           I   T+ F   K LG G FG VYKG    E E     +A+K L +  S +  KE+ +E  
Sbjct: 5   ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63

Query: 436 LFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           + + + + ++ +LLG C+      LI + MP   L  ++ + +           +     
Sbjct: 64  VMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNI--GSQYLLNWCVQI 120

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
           A+G+ YL      R++HRDL A NVL+    + KI+DFGLA+  G +E E +        
Sbjct: 121 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP 615
            +MA E      ++ +SDV+S+G+ + E+++                    +        
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFG---------------SKPYDGIPASEI 222

Query: 616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQPGYL 675
           S +++   +        I    I + C     + RP    +I+      +   P++   +
Sbjct: 223 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF--SKMARDPQRYLVI 280

Query: 676 ADRKSTRLDSSLSMPESSS 694
              +   L S        +
Sbjct: 281 QGDERMHLPSPTDSNFYRA 299

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (497), Expect = 1e-57
 Identities = 72/302 (23%), Positives = 129/302 (42%), Gaps = 33/302 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSK 439
           +  +++++LG+G FG VY+G          E  +A+K +++  S +   E  NE  +  +
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL-------LDWSKRFHII 492
               ++V+LLG    G+  L+I E M    L S++                  SK   + 
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139

Query: 493 CGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVV 552
              A G+ YL+ +   + +HRDL A N ++ +D   KI DFG+ R     +      + +
Sbjct: 140 GEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 196

Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE 612
               +M+PE   DG F+  SDV+SFG++L EI +  +    Y   +   ++R   +    
Sbjct: 197 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ--PYQGLSNEQVLRFVMEGGLL 254

Query: 613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIVLPQPKQP 672
             P    D                 +  +C Q  P+ RP    +I  +  E + P  ++ 
Sbjct: 255 DKPDNCPD-------------MLFELMRMCWQYNPKMRPSFLEIISSI-KEEMEPGFREV 300

Query: 673 GY 674
            +
Sbjct: 301 SF 302

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (492), Expect = 2e-57
 Identities = 74/282 (26%), Positives = 115/282 (40%), Gaps = 28/282 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL----ADEQEIAVKRLSK---ISEQGLKELKNEIILFSK 439
            +  + +KLG+G FG V +G           +AVK L        + + +   E+     
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           L HRNL++L G  +    K+ + E  P  SL   +   +   LL    R+ +    A G+
Sbjct: 68  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV--AEGM 124

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-NTNRVVGTYGYM 558
            YL      R IHRDL A N+LL      KI DFGL RA   ++            + + 
Sbjct: 125 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           APE      FS  SD + FG+ L E+ +  +    +   N   ++    K+  EG     
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQE--PWIGLNGSQIL---HKIDKEGERLPR 236

Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
            + C +D           ++ + C    PEDRP   ++   L
Sbjct: 237 PEDCPQD---------IYNVMVQCWAHKPEDRPTFVALRDFL 269

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (492), Expect = 3e-57
 Identities = 61/277 (22%), Positives = 113/277 (40%), Gaps = 31/277 (11%)

Query: 389 FSINKKLGEGGFGPVYKGTLADE-QEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNL 445
              + ++G G F  VYKG   +   E+A   L    +++   +  K E  +   LQH N+
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70

Query: 446 VKLLGCCIHGEEK----LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           V+         +     +L+ E M + +L +++    R K++             +GL +
Sbjct: 71  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQF 127

Query: 502 LHQDSRLRIIHRDLKASNVLL-DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAP 560
           LH  +   IIHRDLK  N+ +     + KI D GLA              V+GT  +MAP
Sbjct: 128 LHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAP 182

Query: 561 EYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID 620
           E   + ++    DV++FG+ +LE+ + +    +    N   + R            ++  
Sbjct: 183 EMY-EEKYDESVDVYAFGMCMLEMATSE--YPYSECQNAAQIYRRVTSGVKPASFDKVAI 239

Query: 621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
              K+            I   C++Q  ++R  +  ++
Sbjct: 240 PEVKE------------IIEGCIRQNKDERYSIKDLL 264

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (489), Expect = 6e-57
 Identities = 65/277 (23%), Positives = 108/277 (38%), Gaps = 35/277 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F I + LG+G FG VY       +  +A+K L K          +L+ E+ + S L+H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
            N+++L G         LI E+ P  ++   +   ++    D  +    I   A  L Y 
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSKFDEQRTATYITELANALSYC 122

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H     R+IHRD+K  N+LL      KI+DFG +              + GT  Y+ PE 
Sbjct: 123 HS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEM 175

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK--LNLIRHAWKLWNEGMPSQLID 620
                   K D++S G+L  E + GK    F  +  +     I      + + +     D
Sbjct: 176 IEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTYQETYKRISRVEFTFPDFVTEGARD 233

Query: 621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
              +                  ++  P  RP +  V+
Sbjct: 234 LISR-----------------LLKHNPSQRPMLREVL 253

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  191 bits (487), Expect = 3e-56
 Identities = 61/277 (22%), Positives = 129/277 (46%), Gaps = 24/277 (8%)

Query: 378 ELATIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIIL 436
            + ++ +    ++  +K+G+G  G VY    +A  QE+A+++++   +   + + NEI++
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70

Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             + ++ N+V  L   + G+E  ++ E++   SL   + +       D  +   +     
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECL 126

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           + L +LH     ++IHRD+K+ N+LL  D + K++DFG       +++    + +VGT  
Sbjct: 127 QALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPY 181

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           +MAPE  +   +  K D++S GI+ +E++ G+     Y ++N L  +   + +   G P 
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP---PYLNENPLRAL---YLIATNGTPE 235

Query: 617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCM 653
                    S    + +        C+    E R   
Sbjct: 236 LQNPEKL--SAIFRDFLNR------CLDMDVEKRGSA 264

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (477), Expect = 6e-55
 Identities = 74/298 (24%), Positives = 110/298 (36%), Gaps = 39/298 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGT------LADEQEIAVKRLSKISEQGLKE--LKNEIILFS 438
           D   + K LG G FG V +         A  + +AVK L + +        +    IL  
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 439 KLQHRNLVKLLGCCIHGEEKLLI-YEFMPNKSLDSFIFDQERC-------------KLLD 484
              H N+V LLG C      L++  EF    +L +++  +                  L 
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 485 WSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET 544
                      A+G+ +L      + IHRDL A N+LL +    KI DFGLAR    D  
Sbjct: 133 LEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 189

Query: 545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIR 604
                       +MAPE   D  ++++SDV+SFG+LL EI S             + +  
Sbjct: 190 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-----LGASPYPGVKIDE 244

Query: 605 HAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS 662
              +   EG   +  D    +              L C    P  RP    ++  LG+
Sbjct: 245 EFCRRLKEGTRMRAPDYTTPE---------MYQTMLDCWHGEPSQRPTFSELVEHLGN 293

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (464), Expect = 2e-53
 Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 31/281 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQE----IAVKRLSKISEQGLKE-LKNEIILFSKLQ 441
           +   + + +GEG FG V++G     +     +A+K     +   ++E    E +   +  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H ++VKL+G         +I E      L SF+    R   LD +         +  L Y
Sbjct: 67  HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTALAY 123

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           L      R +HRD+ A NVL+  +   K+ DFGL+R +  D T    ++      +MAPE
Sbjct: 124 LE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPE 179

Query: 562 YASDGQFSVKSDVFSFGILLLEI-VSGKKNRGFYHSDNKLNLIRHAWKL-WNEGMPSQLI 619
             +  +F+  SDV+ FG+ + EI + G K      +++ +  I +  +L      P  L 
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 239

Query: 620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
                             +   C    P  RP    +   L
Sbjct: 240 S-----------------LMTKCWAYDPSRRPRFTELKAQL 263

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 6e-53
 Identities = 78/297 (26%), Positives = 118/297 (39%), Gaps = 41/297 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGTL--------ADEQEIAVKRLSK-ISEQGLKELKNEIILF 437
           D   + K LGEG FG V                 ++AVK L    +E+ L +L +E+ + 
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 438 SKL-QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKL-------------L 483
             + +H+N++ LLG C       +I E+    +L  ++  +    L             L
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132

Query: 484 DWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE 543
                       ARG+ YL      + IHRDL A NVL+ +D   KI+DFGLAR     +
Sbjct: 133 SSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189

Query: 544 TEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLI 603
               T        +MAPE   D  ++ +SDV+SFG+LL EI +   +   Y        +
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS--PYPGVP----V 243

Query: 604 RHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
              +KL  EG        C  +            +   C    P  RP    ++  L
Sbjct: 244 EELFKLLKEGHRMDKPSNCTNE---------LYMMMRDCWHAVPSQRPTFKQLVEDL 291

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  183 bits (465), Expect = 1e-52
 Identities = 67/324 (20%), Positives = 120/324 (37%), Gaps = 32/324 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           D++ I+++LG G FG V++ T  A     A K +    E   + ++ EI   S L+H  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           V L        E ++IYEFM    L   + D+     +   +    +    +GL ++H  
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMH-- 141

Query: 506 SRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
                +H DLK  N++     +   K+ DFGL       ++        GT  + APE A
Sbjct: 142 -ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVA 197

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF 623
                   +D++S G+L   ++SG    G  + D  L  ++      ++   S +     
Sbjct: 198 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGI----- 252

Query: 624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSV--------ILMLGSEIVLPQPKQPGYL 675
             S +  + IR        +   P  R  +               G +  +P  +     
Sbjct: 253 --SEDGKDFIRK------LLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIR 304

Query: 676 ADRKSTRLDSSLSMPESSSTNTIT 699
              K+        +P     +  +
Sbjct: 305 DSIKTKYDAWPEPLPPLGRISNYS 328

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (460), Expect = 2e-52
 Identities = 66/240 (27%), Positives = 103/240 (42%), Gaps = 14/240 (5%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LGEG F  V     LA  +E A+K L K   I E  +  +  E  + S+L H
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
              VKL       E+      +  N  L  +I    +    D +            L YL
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---KIGSFDETCTRFYTAEIVSALEYL 124

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H      IIHRDLK  N+LL++DM+ +I+DFG A+    +  +   N  VGT  Y++PE 
Sbjct: 125 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 181

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK--LNLIRHAWKLWNEGMPSQLID 620
            ++      SD+++ G ++ ++V+G     F   +       I      + E    +  D
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGL--PPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 239

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  177 bits (449), Expect = 3e-50
 Identities = 59/268 (22%), Positives = 103/268 (38%), Gaps = 24/268 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           D + I ++LG G FG V++    A  +    K ++         +KNEI + ++L H  L
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           + L        E +LI EF+    L   I        +  ++  + +     GL ++H  
Sbjct: 89  INLHDAFEDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMH-- 144

Query: 506 SRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               I+H D+K  N++ +       KI DFGLA     DE          T  + APE  
Sbjct: 145 -EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIV 200

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF 623
                   +D+++ G+L   ++SG            L  ++     ++E   S +     
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV----- 255

Query: 624 KDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
             S    + I+        +Q+ P  R 
Sbjct: 256 --SPEAKDFIKN------LLQKEPRKRL 275

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 1e-46
 Identities = 61/324 (18%), Positives = 117/324 (36%), Gaps = 33/324 (10%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           + + I + LG G FG V++    + ++    K + K+       +K EI + +  +HRN+
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNI 63

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           + L       EE ++I+EF+    +   I        L+  +    +      L +LH  
Sbjct: 64  LHLHESFESMEELVMIFEFISGLDIFERI--NTSAFELNEREIVSYVHQVCEALQFLHS- 120

Query: 506 SRLRIIHRDLKASNVLLDQDMNP--KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
               I H D++  N++     +   KI +FG AR     +   N   +     Y APE  
Sbjct: 121 --HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVH 175

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF 623
                S  +D++S G L+  ++SG        +   +  I +A   ++E    ++     
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEI----- 230

Query: 624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI--------LMLGSEIVLPQPKQPGYL 675
             S    + +         + +  + R      +        +   S  V+   K   Y 
Sbjct: 231 --SIEAMDFVDR------LLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYY 282

Query: 676 ADRKSTRLDSSLSMPESSSTNTIT 699
                  L+  +S    S    I 
Sbjct: 283 HTLIKKDLNMVVSAARISCGGAIR 306

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 1e-46
 Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 34/279 (12%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK---ISEQGLKELKNEI-ILFSKLQ 441
           ++F ++K LG+G FG V+        Q  A+K L K   + +  ++    E  +L    +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H  L  +       E    + E++    L   I   + C   D S+          GL +
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQF 118

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           LH      I++RDLK  N+LLD+D + KI+DFG+ +     + + NT    GT  Y+APE
Sbjct: 119 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCGTPDYIAPE 173

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK--LNLIRHAWKLWNEGMPSQLI 619
                +++   D +SFG+LL E++ G+    F+  D +   + IR     +   +  +  
Sbjct: 174 ILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEEELFHSIRMDNPFYPRWLEKEAK 231

Query: 620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL 658
           D   K                    + PE R  +   I 
Sbjct: 232 DLLVK-----------------LFVREPEKRLGVRGDIR 253

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  166 bits (420), Expect = 1e-46
 Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 19/240 (7%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
            +F I + LG G FG V+      + +  A+K L K   +  + ++   +E ++ S + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             ++++ G     ++  +I +++    L S +   +R            +C      L L
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC------LAL 117

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
                  II+RDLK  N+LLD++ + KI+DFG A+             + GT  Y+APE 
Sbjct: 118 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY-----TLCGTPDYIAPEV 172

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK--LNLIRHAWKLWNEGMPSQLID 620
            S   ++   D +SFGIL+ E+++G     FY S+       I +A   +       + D
Sbjct: 173 VSTKPYNKSIDWWSFGILIYEMLAGYTP--FYDSNTMKTYEKILNAELRFPPFFNEDVKD 230

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  163 bits (414), Expect = 3e-46
 Identities = 60/275 (21%), Positives = 114/275 (41%), Gaps = 28/275 (10%)

Query: 386 TDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQ 441
           +D + + + LG GG   V+    L   +++AVK L              + E    + L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 442 HRNLVKLLGCCIH----GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           H  +V +          G    ++ E++   +L   +        +   +   +I    +
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQ 122

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-NTNRVVGTYG 556
            L + H   +  IIHRD+K +N+++      K+ DFG+ARA          T  V+GT  
Sbjct: 123 ALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 179

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           Y++PE A       +SDV+S G +L E+++G+     +  D+ +++     +  +   PS
Sbjct: 180 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP---PFTGDSPVSVAYQHVR-EDPIPPS 235

Query: 617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
              +     S +L  V+         + + PE+R 
Sbjct: 236 ARHEGL---SADLDAVVLK------ALAKNPENRY 261

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  166 bits (420), Expect = 4e-46
 Identities = 68/273 (24%), Positives = 113/273 (41%), Gaps = 32/273 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSK---ISEQGLKELKNEII---LFSK 439
           ++FS+++ +G GGFG VY    AD  +  A+K L K     +QG     NE I   L S 
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
                +V +       ++   I + M    L   +           +           GL
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF---SEADMRFYAAEIILGL 120

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMA 559
            ++H      +++RDLK +N+LLD+  + +ISD GLA  F     +   +  VGT+GYMA
Sbjct: 121 EHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYMA 173

Query: 560 PEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL 618
           PE    G  +   +D FS G +L +++ G      + + +K  + R    +  E +P   
Sbjct: 174 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE-LPDSF 232

Query: 619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
                  S  L  ++         +Q+    R 
Sbjct: 233 -------SPELRSLLEG------LLQRDVNRRL 252

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 1e-45
 Identities = 59/273 (21%), Positives = 115/273 (42%), Gaps = 12/273 (4%)

Query: 381 TIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQG-LKELKNEIILFS 438
            + +    ++    +GEG +G V       ++  +A+K++S    Q   +    EI +  
Sbjct: 2   QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 61

Query: 439 KLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARG 498
           + +H N++ +         + +   ++    + + ++   + + L      + +    RG
Sbjct: 62  RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRG 121

Query: 499 LLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNT-NRVVGTYGY 557
           L Y+H      ++HRDLK SN+LL+   + KI DFGLAR    D          V T  Y
Sbjct: 122 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 178

Query: 558 MAPEYASDGQFSVKS-DVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
            APE   + +   KS D++S G +L E++S +     +   + L+ + H   +   G PS
Sbjct: 179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP---IFPGKHYLDQLNHILGI--LGSPS 233

Query: 617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPED 649
           Q    C  +      ++   H   +   +   +
Sbjct: 234 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPN 266

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  160 bits (406), Expect = 9e-45
 Identities = 59/270 (21%), Positives = 101/270 (37%), Gaps = 21/270 (7%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQG-LKELKNEIILFSKLQ 441
           +  D +     LG G F  V        ++ +A+K ++K + +G    ++NEI +  K++
Sbjct: 6   DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 65

Query: 442 HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLY 501
           H N+V L      G    LI + +    L   I                +I      + Y
Sbjct: 66  HPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVKY 122

Query: 502 LHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE 561
           LH    +    +        LD+D    ISDFGL++           +   GT GY+APE
Sbjct: 123 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVAPE 179

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
             +   +S   D +S G++   ++ G      ++ +N   L     K       S   D 
Sbjct: 180 VLAQKPYSKAVDCWSIGVIAYILLCGYP---PFYDENDAKLFEQILK-AEYEFDSPYWDD 235

Query: 622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
               S +  + IR        +++ PE R 
Sbjct: 236 I---SDSAKDFIRH------LMEKDPEKRF 256

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  157 bits (398), Expect = 9e-44
 Identities = 50/283 (17%), Positives = 96/283 (33%), Gaps = 25/283 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
           + + + +K+G G FG +Y GT +A  +E+A+K     ++    +L  E  ++  +Q    
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 64

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           +  +  C    +  ++   +   SL+       R           +       + Y+H  
Sbjct: 65  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH-- 120

Query: 506 SRLRIIHRDLKASNVL---LDQDMNPKISDFGLARAFGGDETEGN-----TNRVVGTYGY 557
                IHRD+K  N L     +     I DFGLA+ +    T  +        + GT  Y
Sbjct: 121 -SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 179

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
            +       + S + D+ S G +L+    G        +  K        +         
Sbjct: 180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 239

Query: 618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
           L      +    A  +        C     +D+P    +  + 
Sbjct: 240 LCKGYPSE---FATYLNF------CRSLRFDDKPDYSYLRQLF 273

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  156 bits (396), Expect = 9e-44
 Identities = 58/282 (20%), Positives = 111/282 (39%), Gaps = 39/282 (13%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK---------ISEQGLKELKNEIIL 436
           +N+   + LG G    V +       +E AVK +             ++  +    E+ +
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 437 FSKLQ-HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
             K+  H N+++L           L+++ M    L  ++ ++     L   +   I+   
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRAL 119

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTY 555
              +  LH   +L I+HRDLK  N+LLD DMN K++DFG +      E       V GT 
Sbjct: 120 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREVCGTP 173

Query: 556 GYMAPEYASDGQ------FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL 609
            Y+APE            +  + D++S G+++  +++G      +    ++ ++R     
Sbjct: 174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP---PFWHRKQMLMLRMIMS- 229

Query: 610 WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
            N    S   D     S  + +++         +   P+ R 
Sbjct: 230 GNYQFGSPEWDDY---SDTVKDLVSR------FLVVQPQKRY 262

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (390), Expect = 8e-43
 Identities = 72/281 (25%), Positives = 113/281 (40%), Gaps = 23/281 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHR 443
           +NF   +K+GEG +G VYK       + +A+K  RL   +E        EI L  +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+VKLL       +  L++EF+          D      +        +    +GL + H
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFCH 119

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-Y 562
                R++HRDLK  N+L++ +   K++DFGLARAFG           V T  Y APE  
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH--EVVTLWYRAPEIL 174

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKN-RGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA 621
                +S   D++S G +  E+V+ +    G    D    + R          P      
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 234

Query: 622 CFKDSF------NLAEVIRCIHIGLL-----CVQQYPEDRP 651
            +K SF      + ++V+  +           +   P  R 
Sbjct: 235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI 275

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  153 bits (388), Expect = 1e-42
 Identities = 38/285 (13%), Positives = 101/285 (35%), Gaps = 27/285 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
            ++ + +++GEG FG +++GT L + Q++A+K   + S+    +L++E   +  L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62

Query: 446 VKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD 505
           +  +          ++   +   SL+  +      +                 +  +H+ 
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLL--DLCGRKFSVKTVAMAAKQMLARVQSIHE- 119

Query: 506 SRLRIIHRDLKASNVLLDQDMNP-----KISDFGLARAFGGDETEGN-----TNRVVGTY 555
               +++RD+K  N L+ +  +       + DFG+ + +    T+ +        + GT 
Sbjct: 120 --KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 177

Query: 556 GYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP 615
            YM+       + S + D+ + G + +  + G        +           ++  +   
Sbjct: 178 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY---ERIGEKKQS 234

Query: 616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILML 660
           + L + C        + +              +  P    +  + 
Sbjct: 235 TPLRELCAGFPEEFYKYMHY------ARNLAFDATPDYDYLQGLF 273

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 2e-41
 Identities = 61/289 (21%), Positives = 106/289 (36%), Gaps = 30/289 (10%)

Query: 385 ATDNFSINKKLGEGGFGPVYKGT--LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKL 440
           A   +    ++GEG +G V+K        + +A+KR+      E        E+ +   L
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 441 ---QHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDS---FIFDQERCKLLDWSKRFHIICG 494
              +H N+V+L   C            +  + +D       D+     +       ++  
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGT 554
             RGL +LH     R++HRDLK  N+L+      K++DFGLAR +     +     VV T
Sbjct: 125 LLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVT 178

Query: 555 YGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL----- 609
             Y APE      ++   D++S G +  E+   K    F  S +   L +    +     
Sbjct: 179 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK--PLFRGSSDVDQLGKILDVIGLPGE 236

Query: 610 --WNEGMPSQLIDACFKDSFNLAEVIRCIHIGLL-----CVQQYPEDRP 651
             W   +         K +  + + +  I          C+   P  R 
Sbjct: 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI 285

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (378), Expect = 4e-41
 Identities = 60/279 (21%), Positives = 109/279 (39%), Gaps = 33/279 (11%)

Query: 384 NATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKIS------EQGLKELKNEIIL 436
           N  D +   ++LG G F  V K    +   + A K + K            ++++ E+ +
Sbjct: 7   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66

Query: 437 FSKLQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++QH N++ L     +  + +LI E +    L  F+ ++E    L   +    +    
Sbjct: 67  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQIL 123

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP----KISDFGLARAFGGDETEGNTNRVV 552
            G+ YLH    L+I H DLK  N++L     P    KI DFGLA              + 
Sbjct: 124 NGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIF 177

Query: 553 GTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE 612
           GT  ++APE  +     +++D++S G++   ++SG            L  +      + +
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237

Query: 613 GMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
              S         S    + IR        + + P+ R 
Sbjct: 238 EYFSNT-------SALAKDFIRR------LLVKDPKKRM 263

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  149 bits (377), Expect = 4e-41
 Identities = 66/282 (23%), Positives = 116/282 (41%), Gaps = 23/282 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKISEQGLKELKNEIILFSKLQHRN 444
           + +   +K+GEG +G VYK      +  A+K  RL K  E        EI +  +L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 445 LVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ 504
           +VKL       +  +L++E +           +     L+       +     G+ Y H 
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG---LESVTAKSFLLQLLNGIAYCHD 118

Query: 505 DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE-YA 563
               R++HRDLK  N+L++++   KI+DFGLARAF            + T  Y AP+   
Sbjct: 119 ---RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLM 173

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKK-NRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC 622
              ++S   D++S G +  E+V+G     G   +D  + + R      ++  P+      
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233

Query: 623 FKDSFNLAEVIR-----------CIHIGLLCVQQYPEDRPCM 653
           +  +F + E +             I +    ++  P  R   
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITA 275

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (371), Expect = 3e-40
 Identities = 71/280 (25%), Positives = 113/280 (40%), Gaps = 32/280 (11%)

Query: 393 KKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKE-----LKNEIILFSKLQHRNLV 446
             LGEG F  VYK       Q +A+K++        K+        EI L  +L H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 447 KLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS 506
            LL    H     L+++FM           ++   +L  S     +  T +GL YLHQ  
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEV---IIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH- 119

Query: 507 RLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDG 566
              I+HRDLK +N+LLD++   K++DFGLA++FG           V T  Y APE     
Sbjct: 120 --WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGA 175

Query: 567 Q-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD 625
           + + V  D+++ G +L E++       F   D+ L+ +   ++        Q  D C   
Sbjct: 176 RMYGVGVDMWAVGCILAELLLR---VPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 232

Query: 626 SFNLAEVIRCIHIGLL--------------CVQQYPEDRP 651
            +   +    I +  +                   P  R 
Sbjct: 233 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI 272

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (368), Expect = 6e-40
 Identities = 61/282 (21%), Positives = 102/282 (36%), Gaps = 43/282 (15%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKN------EIILFSK 439
             + +   LG GGFG VY G  ++D   +A+K + K       EL N      E++L  K
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 440 LQ--HRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           +      +++LL      +  +LI E             +     L              
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLE 121

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
            + + H      ++HRD+K  N+L+D +    K+ DFG          +       GT  
Sbjct: 122 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRV 174

Query: 557 YMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP 615
           Y  PE+    ++    + V+S GILL ++V G     F H +     I      + + + 
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEE----IIRGQVFFRQRVS 228

Query: 616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI 657
           S+              +IR       C+   P DRP    + 
Sbjct: 229 SECQH-----------LIRW------CLALRPSDRPTFEEIQ 253

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (370), Expect = 1e-39
 Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 12/238 (5%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           ++F   K LG+G FG V      A  +  A+K L K   I++  +     E  +    +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             L  L       +    + E+     L   +    R ++    +        A  +  L
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYG---AEIVSAL 118

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
                  +++RD+K  N++LD+D + KI+DFGL +    D          GT  Y+APE 
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEV 176

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID 620
             D  +    D +  G+++ E++ G+        +    LI      +   +  +   
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (371), Expect = 1e-39
 Identities = 62/287 (21%), Positives = 103/287 (35%), Gaps = 33/287 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLADE-QEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL 445
            +++  K +G G FG VY+  L D  + +A+K++ +           E+ +  KL H N+
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNI 75

Query: 446 VKLLGCCIHGEEK------LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           V+L        EK       L+ +++P              + L        +    R L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQD-MNPKISDFGLARAFGGDETEGNTNRVVGTYGYM 558
            Y+H      I HRD+K  N+LLD D    K+ DFG A+     E   N + +   Y   
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSRYYRA 190

Query: 559 APEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL--------------IR 604
                    ++   DV+S G +L E++ G+    F        L              IR
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ--PIFPGDSGVDQLVEIIKVLGTPTREQIR 248

Query: 605 HAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
                + E    Q+    +   F        I +    ++  P  R 
Sbjct: 249 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL 295

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (365), Expect = 7e-39
 Identities = 51/275 (18%), Positives = 107/275 (38%), Gaps = 31/275 (11%)

Query: 387 DNFSI-NKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEI-ILFSKLQHR 443
           D++ + ++ LG G  G V +      +++ A+K L         + + E+ + +   Q  
Sbjct: 11  DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCP 65

Query: 444 NLVKLLGCCIHGEEK----LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
           ++V+++    +        L++ E +    L S I D+   +     +   I+      +
Sbjct: 66  HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAI 124

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNP---KISDFGLARAFGGDETEGNTNRVVGTYG 556
            YLH    + I HRD+K  N+L          K++DFG A+      +         T  
Sbjct: 125 QYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY---TPY 178

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS 616
           Y+APE     ++    D++S G+++  ++ G      ++S++ L +          G   
Sbjct: 179 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP---PFYSNHGLAISPGMKTRIRMGQYE 235

Query: 617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
                  + S  +  +IR        ++  P  R 
Sbjct: 236 FPNPEWSEVSEEVKMLIRN------LLKTEPTQRM 264

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (359), Expect = 2e-38
 Identities = 55/262 (20%), Positives = 106/262 (40%), Gaps = 23/262 (8%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHR 443
             +    K+G+G FG V+K       Q++A+K++      E        EI +   L+H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 444 NLVKLLGCCIHGEEK--------LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGT 495
           N+V L+  C               L+++F  +           +  L +  +   ++   
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML--- 126

Query: 496 ARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR--VVG 553
              L  L+   R +I+HRD+KA+NVL+ +D   K++DFGLARAF   +          V 
Sbjct: 127 ---LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV 183

Query: 554 TYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE 612
           T  Y  PE     + +    D++  G ++ E+ +          + + + +    +L   
Sbjct: 184 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP---IMQGNTEQHQLALISQLCGS 240

Query: 613 GMPSQLIDACFKDSFNLAEVIR 634
             P    +    + +   E+++
Sbjct: 241 ITPEVWPNVDNYELYEKLELVK 262

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 3e-37
 Identities = 55/283 (19%), Positives = 109/283 (38%), Gaps = 27/283 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHR 443
             +   +K+GEG +G V+K       + +A+KR+      E        EI L  +L+H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 444 NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLH 503
           N+V+L       ++  L++EF        F                 +     + L  L 
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN------GDLDPEIVKSFLFQLLKGLG 115

Query: 504 QDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYA 563
                 ++HRDLK  N+L++++   K+++FGLARAFG       +  VV  +        
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC-YSAEVVTLWYRPPDVLF 174

Query: 564 SDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC- 622
               +S   D++S G +  E+ +    R  +  ++  + ++  ++L       Q      
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAG--RPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232

Query: 623 ---------FKDSFNLAEVIRCIHIGLL-----CVQQYPEDRP 651
                    +  + +L  V+  ++          ++  P  R 
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI 275

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  138 bits (347), Expect = 2e-36
 Identities = 59/269 (21%), Positives = 100/269 (37%), Gaps = 32/269 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK---ISEQGLKELKNEIILFSKLQH 442
           D F   K LG G FG V            A+K L K   +  + ++   NE  +   +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 443 RNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
             LVKL           ++ E++    + S +    R                     YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYL 157

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEY 562
           H    L +I+RDLK  N+L+DQ    +++DFG A+       +G T  + GT   +APE 
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEALAPEI 209

Query: 563 ASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC 622
                ++   D ++ G+L+ E+ +G      + +D  + +            PS      
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYP---PFFADQPIQIYEKIVSGKVR-FPSHF---- 261

Query: 623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
              S +L +++R        +Q     R 
Sbjct: 262 ---SSDLKDLLRN------LLQVDLTKRF 281

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 6e-35
 Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 13/207 (6%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHR 443
             +   + +G G +G V          ++A+K+L +   SE   K    E+ L   ++H 
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 444 NLVKLLGCCIHGEEKLLIYEF-MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYL 502
           N++ LL      E      +F +    + + +    + + L   +   ++    +GL Y+
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 137

Query: 503 HQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPE- 561
           H      IIHRDLK  N+ +++D   KI DFGLAR     + +      V T  Y APE 
Sbjct: 138 H---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMTGYVVTRWYRAPEV 189

Query: 562 YASDGQFSVKSDVFSFGILLLEIVSGK 588
             +  +++   D++S G ++ E+++GK
Sbjct: 190 ILNWMRYTQTVDIWSVGCIMAEMITGK 216

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  129 bits (325), Expect = 1e-33
 Identities = 57/285 (20%), Positives = 116/285 (40%), Gaps = 35/285 (12%)

Query: 345 VVNIARYFRENRNNRGTEQKN-EDQNIDLDLPLFELATIANATDNFSINKKLGEGGFGPV 403
           V + AR + +   +R  E  + E   ++               D++ + +KLG G +  V
Sbjct: 3   VPSRARVYTDVNTHRPREYWDYESHVVEWGNQ-----------DDYQLVRKLGRGKYSEV 51

Query: 404 YKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKL-- 459
           ++   + + +++ VK L  + +   K++K EI +   L+   N++ L         +   
Sbjct: 52  FEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 108

Query: 460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASN 519
           L++E + N             + L        +    + L Y H    + I+HRD+K  N
Sbjct: 109 LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHN 159

Query: 520 VLLD-QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQ-FSVKSDVFSF 577
           V++D +    ++ D+GLA  +   +     N  V +  +  PE   D Q +    D++S 
Sbjct: 160 VMIDHEHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSL 216

Query: 578 GILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC 622
           G +L  ++  K+   F+H  +  + +    K+         ID  
Sbjct: 217 GCMLASMIFRKEP--FFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 259

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (321), Expect = 4e-33
 Identities = 63/276 (22%), Positives = 113/276 (40%), Gaps = 31/276 (11%)

Query: 387 DNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKIS----EQGLKELKNEIILFS 438
           +NF + K LG G +G V+           +  A+K L K +     +  +  + E  +  
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 439 KLQHR-NLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
            ++    LV L        +  LI +++    L + +  +ER    +       I     
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEI----- 138

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
            +L L    +L II+RD+K  N+LLD + +  ++DFGL++ F  DETE       GT  Y
Sbjct: 139 -VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEY 196

Query: 558 MAPEYASDGQ--FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP 615
           MAP+    G        D +S G+L+ E+++G      +  D + N      +   +  P
Sbjct: 197 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS---PFTVDGEKNSQAEISRRILKSEP 253

Query: 616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP 651
               +     S    ++I+        + + P+ R 
Sbjct: 254 PYPQEM----SALAKDLIQR------LLMKDPKKRL 279

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (311), Expect = 2e-31
 Identities = 55/247 (22%), Positives = 96/247 (38%), Gaps = 24/247 (9%)

Query: 387 DNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHR 443
             +   K +G G  G V        ++ +A+K+LS+   ++   K    E++L   + H+
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 444 NLVKLLGCCIH------GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTAR 497
           N++ LL            ++  L+ E M          +       D  +  +++     
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL------DHERMSYLLYQMLC 130

Query: 498 GLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGY 557
           G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G           V T  Y
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYY 184

Query: 558 MAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ 617
            APE      +    D++S G ++ E+V  K     +   + ++      +      P  
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKI---LFPGRDYIDQWNKVIEQLGTPCPEF 241

Query: 618 LIDACFK 624
           +      
Sbjct: 242 MKKLQPT 248

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (303), Expect = 1e-30
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 11/212 (5%)

Query: 381 TIANATDNFSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSK--ISEQGLKELKNEIILF 437
           TI    + +     +G G +G V           +AVK+LS+   S    K    E+ L 
Sbjct: 12  TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71

Query: 438 SKLQHRNLVKLLGCCIHGEE-KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTA 496
             ++H N++ LL         +     ++    + + + +  +C+ L       +I    
Sbjct: 72  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 131

Query: 497 RGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYG 556
           RGL Y+H      IIHRDLK SN+ +++D   KI DFGLAR    + T     R    + 
Sbjct: 132 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WY 184

Query: 557 YMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
                  +   ++   D++S G ++ E+++G+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  115 bits (289), Expect = 1e-28
 Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 18/215 (8%)

Query: 389 FSINKKLGEGGFGPVYKGT-LADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK 447
           + + +KLG G F  V+    + +   +A+K +    +   +  ++EI L  ++   +  K
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTK 73

Query: 448 LLGCCIHGEEKLLIY--EFMPNKSLDSFIFDQERCKLLDWSKRF-----------HIICG 494
                 +   KLL +     PN      +F+     LL   K++            I   
Sbjct: 74  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 133

Query: 495 TARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGLARAFGGDETEGNTNRVVG 553
              GL Y+H+  R  IIH D+K  NVL++  D    +    +A        + +    + 
Sbjct: 134 LLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ 191

Query: 554 TYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK 588
           T  Y +PE      +   +D++S   L+ E+++G 
Sbjct: 192 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 226

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 96.8 bits (240), Expect = 1e-23
 Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 27/205 (13%)

Query: 390 SINKKLGEGGFGPVYKGTLADEQEIAVK--RLSKIS--------EQGLKELKNEIILFSK 439
           +I K +GEG    V+        E  VK  ++   S        + G        I  ++
Sbjct: 3   AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62

Query: 440 LQHRNLVKLLGCCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGL 499
            + R L KL G  +       +Y +  N ++   + D +    +       ++      +
Sbjct: 63  NEFRALQKLQGLAVPK-----VYAWEGN-AVLMELIDAKELYRVRVENPDEVLDMILEEV 116

Query: 500 LYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNR-VVGTYGYM 558
              +      I+H DL   NVL+  +    I DF  +   G +       R V     Y 
Sbjct: 117 AKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGEEGWREILERDVRNIITYF 172

Query: 559 APEYASDGQFSVKSDVFSFGILLLE 583
           +  Y        + D+ S    +L+
Sbjct: 173 SRTY------RTEKDINSAIDRILQ 191

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	706
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.88
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	98.62
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.61
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	98.32
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	98.26
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	98.05
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.05
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	97.9
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.61
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	97.57
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	97.51
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	97.49
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	97.2
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	97.13
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.87
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.82
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	96.6
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	96.56
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.0
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	91.87
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	89.54
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	88.17
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	85.8
d1dx5i2	35	Thrombomodulin, different EGF-like domains {Human	84.29
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	83.66
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	83.22
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	82.82
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	80.22

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-50  Score=409.97  Aligned_cols=259  Identities=27%  Similarity=0.442  Sum_probs=201.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.++||+|+||+||+|+.++  .||||+++.  ......+.|.+|+.++++++|||||++++++. .+..++|||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEe
Confidence            3689999999999999999998753  599999864  34556789999999999999999999999875 457899999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++|+|.++|....  ..+++..++.++.||++||+|||+++   |+||||||+||||+.++++||+|||+|+......
T Consensus        84 y~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~~---ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~  158 (276)
T d1uwha_          84 WCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS  158 (276)
T ss_dssp             CCCEEEHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTSSEEECCCCCSCC-----
T ss_pred             cCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHhcCC---EeccccCHHHEEEcCCCCEEEccccceeeccccC
Confidence            999999999996543  45899999999999999999999987   9999999999999999999999999998765444


Q ss_pred             CcccccccccccCccCcccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASD---GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      .........||+.|||||++.+   ..++.++|||||||+||||+||+.||......  .............+....+..
T Consensus       159 ~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~  236 (276)
T d1uwha_         159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQIIFMVGRGYLSPDLSKVRS  236 (276)
T ss_dssp             -------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHHTSCCCCGGGSCT
T ss_pred             CcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChH--HHHHHHHhcCCCCCcchhccc
Confidence            3334455689999999999964   35899999999999999999999998543221  111111111111111111111


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                           ..    ...+.+++.+||+.||.+||||+||++.|+.+
T Consensus       237 -----~~----~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l  270 (276)
T d1uwha_         237 -----NC----PKAMKRLMAECLKKKRDERPLFPQILASIELL  270 (276)
T ss_dssp             -----TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----cc----hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                 11    12466789999999999999999999999865

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-50  Score=407.49  Aligned_cols=255  Identities=25%  Similarity=0.405  Sum_probs=198.2

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.++||+|+||.||+|++.+++.||||+++... ...++|.+|+.++++++|||||++++++.+.+..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            5789999999999999999999888899999997533 345789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +|+|.+++...  ...+++..++.++.|||+||+|||+.+   |+||||||+||||++++.+||+|||+++........ 
T Consensus        84 ~g~L~~~l~~~--~~~~~~~~~~~i~~qia~gl~~lH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~-  157 (263)
T d1sm2a_          84 HGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-  157 (263)
T ss_dssp             TCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCTTCSGGGEEECGGGCEEECSCC------------
T ss_pred             CCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHhhhccc---eeecccchhheeecCCCCeEecccchheeccCCCce-
Confidence            99999998653  345889999999999999999999988   999999999999999999999999999876433222 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                      ......||+.|+|||++.+..++.++|||||||++|||+|+..|+..  ................... +.        .
T Consensus       158 ~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~--~~~~~~~~~~i~~~~~~~~-p~--------~  226 (263)
T d1sm2a_         158 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NRSNSEVVEDISTGFRLYK-PR--------L  226 (263)
T ss_dssp             -------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTC--SCCHHHHHHHHHHTCCCCC-CT--------T
T ss_pred             eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCC--CCCHHHHHHHHHhcCCCCC-cc--------c
Confidence            22335789999999999999999999999999999999996544321  1122222222222111111 11        1


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .    ...+.+++.+||+.||++||||+||++.|+.+
T Consensus       227 ~----~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         227 A----STHVYQIMNHCWKERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             S----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             c----CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            1    12466899999999999999999999999865

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-50  Score=405.41  Aligned_cols=253  Identities=26%  Similarity=0.349  Sum_probs=202.3

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.++||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.++++++|||||++++++.+++..++|||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            367999999999999999999985 58899999986532 3345678999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+++|+|.++|...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+....
T Consensus        84 y~~gg~L~~~l~~~---~~l~e~~~~~i~~qi~~al~ylH~~~---IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~  157 (271)
T d1nvra_          84 YCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  157 (271)
T ss_dssp             CCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             ccCCCcHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHcC---CccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence            99999999999543   45899999999999999999999988   9999999999999999999999999999875443


Q ss_pred             CcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      ........+||+.|||||++.+..+ +.++|||||||++|||++|+.||........  ......   ..........  
T Consensus       158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~--~~~~~~---~~~~~~~~~~--  230 (271)
T d1nvra_         158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWK---EKKTYLNPWK--  230 (271)
T ss_dssp             EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH--HHHHHH---TTCTTSTTGG--
T ss_pred             ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH--HHHHHh---cCCCCCCccc--
Confidence            3333445789999999999988876 5789999999999999999999864332221  111111   1111110000  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                         ..+    ..+.+++.+||+.||++|||++|+++
T Consensus       231 ---~~s----~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         231 ---KID----SAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             ---GSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---cCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               111    24557889999999999999999865

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-49  Score=404.79  Aligned_cols=254  Identities=31%  Similarity=0.451  Sum_probs=204.9

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.++||+|+||.||+|++++++.||||+++... ...+.|.+|+.++++++|||||++++++. .+..++||||++
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~   90 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME   90 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCC
Confidence            5788999999999999999999888899999996533 34578999999999999999999999875 456799999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +|+|.+++.... ...+++..+++++.||++||+|||+.+   |+||||||+||||++++.+||+|||+|+.+...... 
T Consensus        91 ~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~~---ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~-  165 (272)
T d1qpca_          91 NGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-  165 (272)
T ss_dssp             TCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-
T ss_pred             CCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccchhheeeecccceeeccccceEEccCCccc-
Confidence            999999885543 235899999999999999999999988   999999999999999999999999999987543222 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                      ......||+.|||||++.+..++.++|||||||++|||+||..|+...  ..........    ..+......+     .
T Consensus       166 ~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~--~~~~~~~~~i----~~~~~~~~p~-----~  234 (272)
T d1qpca_         166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNL----ERGYRMVRPD-----N  234 (272)
T ss_dssp             CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT--CCHHHHHHHH----HTTCCCCCCT-----T
T ss_pred             cccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCC--CCHHHHHHHH----HhcCCCCCcc-----c
Confidence            223457899999999999999999999999999999999976664321  1122222221    1211111111     1


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      .+    ..+.+|+.+||+.||++||||+||+++|+.
T Consensus       235 ~~----~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         235 CP----EELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             CC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             Ch----HHHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            11    246678999999999999999999999874

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7e-50  Score=409.58  Aligned_cols=257  Identities=26%  Similarity=0.411  Sum_probs=209.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeCC-CcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLAD-EQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.++||+|+||+||+|++.. ++.||||+++... ...++|.+|+.++++++|||||++++++.+++..++||||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   94 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence            4678999999999999999999854 7889999986533 3467899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +++|+|.+++.... ...+++..++.++.||++||+|||+++   |+||||||+||||++++.+||+|||+|+....+..
T Consensus        95 ~~~g~l~~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~  170 (287)
T d1opja_          95 MTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  170 (287)
T ss_dssp             CTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSS
T ss_pred             ccCcchHHHhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHCC---cccCccccCeEEECCCCcEEEccccceeecCCCCc
Confidence            99999999996543 356899999999999999999999988   99999999999999999999999999997654322


Q ss_pred             cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          545 EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                      . ......|++.|+|||++.+..++.++|||||||++|||++|..|+...  ......    ......+......+    
T Consensus       171 ~-~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~--~~~~~~----~~~i~~~~~~~~~~----  239 (287)
T d1opja_         171 T-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQV----YELLEKDYRMERPE----  239 (287)
T ss_dssp             E-EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTT--CCHHHH----HHHHHTTCCCCCCT----
T ss_pred             e-eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCc--chHHHH----HHHHhcCCCCCCCc----
Confidence            2 223356899999999999999999999999999999999987775321  111111    12222222111111    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       ..+    ..+.+|+..||+.||.+||||+||++.|+.+
T Consensus       240 -~~~----~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         240 -GCP----EKVYELMRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             -TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             -cch----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence             111    2466899999999999999999999999865

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-48  Score=399.53  Aligned_cols=249  Identities=23%  Similarity=0.405  Sum_probs=205.7

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      ++|++.++||+|+||+||+|+. .+|+.||||++........+.+.+|+.++++++|||||++++++.+.+..++||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            5799999999999999999997 458999999987655556678999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++|+|.+++.+    ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++++||+|||+|+.+..... 
T Consensus       100 ~gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~-  171 (293)
T d1yhwa1         100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-  171 (293)
T ss_dssp             TTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred             CCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCcHHHeEECCCCcEeeccchhheeeccccc-
Confidence            99999998754    34899999999999999999999998   99999999999999999999999999998643322 


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                       ......||+.|||||++.+..++.++|||||||++|||++|+.||....   .......   .............    
T Consensus       172 -~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~---~~~~~~~---~~~~~~~~~~~~~----  240 (293)
T d1yhwa1         172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN---PLRALYL---IATNGTPELQNPE----  240 (293)
T ss_dssp             -CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC---HHHHHHH---HHHHCSCCCSSGG----
T ss_pred             -cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCC---HHHHHHH---HHhCCCCCCCCcc----
Confidence             2334679999999999999999999999999999999999999985322   1222211   1111111100000    


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..+    ..+.+++.+||+.||.+|||++|+++
T Consensus       241 ~~s----~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         241 KLS----AIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             GSC----HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111    24567899999999999999999975

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.9e-49  Score=407.49  Aligned_cols=257  Identities=26%  Similarity=0.400  Sum_probs=197.1

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-C---cEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-E---QEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.++||+|+||+||+|++.. +   ..||||++.. ......+.|.+|+.++++++|||||++++++.+.+..++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            567888999999999999999753 2   2589998865 3555667899999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++....  ..+++.+++.++.||++||+|||+++   |+||||||+||||+.++++||+|||+++.+..
T Consensus       106 ~Ey~~~g~L~~~~~~~~--~~l~~~~~~~i~~qia~gl~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             EECCTTEEHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEecCCCcceeeecccc--CCCCHHHHHHHHHHHHHHHHHHhhCC---CccCccccceEEECCCCcEEECCcccceEccC
Confidence            99999999999886432  45899999999999999999999988   99999999999999999999999999998754


Q ss_pred             CCCcc---cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          542 DETEG---NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       542 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      .....   ......||+.|||||.+.+..++.++|||||||+||||+| |+.||.....   .+......    .+....
T Consensus       181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~---~~~~~~i~----~~~~~~  253 (299)
T d1jpaa_         181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN---QDVINAIE----QDYRLP  253 (299)
T ss_dssp             ---------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHHH----TTCCCC
T ss_pred             CCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCH---HHHHHHHH----cCCCCC
Confidence            33222   1222457899999999999999999999999999999998 8999754322   22222211    111111


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      ..         ......+.+++.+||+.||.+||||.||++.|+.+.
T Consensus       254 ~~---------~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l  291 (299)
T d1jpaa_         254 PP---------MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI  291 (299)
T ss_dssp             CC---------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CC---------ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            10         011234667999999999999999999999998753

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-49  Score=401.46  Aligned_cols=245  Identities=25%  Similarity=0.365  Sum_probs=203.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||+||+|+.+ +++.||||++.+.   .....+.+.+|+.++++++|||||++++++.+++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            57999999999999999999985 5889999998642   2334577899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.||++||+|||+++   |+||||||+||||+.++.+||+|||+|+.....
T Consensus        86 Ey~~~g~L~~~l~~~---~~l~e~~~~~i~~qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1          86 EYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  159 (263)
T ss_dssp             ECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred             eecCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeeeeccccceecCCCCEeecccceeeecCCC
Confidence            999999999999653   35899999999999999999999988   999999999999999999999999999875332


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                          ......||+.|||||++.+..++.++|||||||+||||++|+.||....   ........    ..... .+ .  
T Consensus       160 ----~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~---~~~~~~~i----~~~~~-~~-p--  224 (263)
T d2j4za1         160 ----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT---YQETYKRI----SRVEF-TF-P--  224 (263)
T ss_dssp             ----CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS---HHHHHHHH----HTTCC-CC-C--
T ss_pred             ----cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCC---HHHHHHHH----HcCCC-CC-C--
Confidence                2334679999999999999999999999999999999999999985422   22222211    11111 00 0  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                        ...+    ..+.+++.+||+.||.+|||++|+++
T Consensus       225 --~~~s----~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         225 --DFVT----EGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             --TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --ccCC----HHHHHHHHHHccCCHhHCcCHHHHHc
Confidence              1111    24567899999999999999999986

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-49  Score=406.24  Aligned_cols=248  Identities=25%  Similarity=0.330  Sum_probs=201.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.+.||+|+||+||+|+.. +++.||||++.+.   .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            57999999999999999999984 5889999998652   2334578999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|.+++...   ..+++..+..++.|++.||+|||+.+   |+||||||+||||++++.+||+|||+|+.+...
T Consensus        88 Ey~~gg~L~~~~~~~---~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~  161 (288)
T d1uu3a_          88 SYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  161 (288)
T ss_dssp             CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EccCCCCHHHhhhcc---CCCCHHHHHHHHHHHHHHHHhhcccc---EEcCcCCccccccCCCceEEecccccceecccC
Confidence            999999999988644   35899999999999999999999998   999999999999999999999999999987544


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      ..........||+.|||||++.+..++.++|||||||++|||++|+.||....   ........   . .... .+ .  
T Consensus       162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~---~~~~~~~i---~-~~~~-~~-p--  230 (288)
T d1uu3a_         162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN---EYLIFQKI---I-KLEY-DF-P--  230 (288)
T ss_dssp             --------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHH---H-TTCC-CC-C--
T ss_pred             CcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC---HHHHHHHH---H-cCCC-CC-C--
Confidence            44444445689999999999999999999999999999999999999985422   22222111   1 1111 11 0  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVI  657 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~  657 (706)
                        ...+    ..+.+++.+||+.||.+|||++|++
T Consensus       231 --~~~s----~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         231 --EKFF----PKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             --TTCC----HHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             --ccCC----HHHHHHHHHHccCCHhHCcCHHHHc
Confidence              1111    2456889999999999999999964

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-49  Score=398.49  Aligned_cols=254  Identities=25%  Similarity=0.345  Sum_probs=194.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEe--CCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIH--GEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lV  461 (706)
                      ++|++.+.||+|+||+||+|+.. +|+.||||++...  .....+.+.+|+.++++++|||||++++++.+  ....++|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            67999999999999999999984 5889999998653  45556789999999999999999999999875  4567999


Q ss_pred             EecCCCCChhhhhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCC--CceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          462 YEFMPNKSLDSFIFDQE-RCKLLDWSKRFHIICGTARGLLYLHQDSR--LRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~--~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      |||+++|+|.+++.+.. ....+++..++.++.||+.||+|||+.+.  .+|+||||||+||||+.++.+||+|||+|+.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            99999999999996532 34568999999999999999999998642  3499999999999999999999999999998


Q ss_pred             cCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL  618 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  618 (706)
                      +.....  ......||+.|||||++.+..++.++|||||||++|||++|+.||....   ..+....    +..+....+
T Consensus       164 ~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~---~~~~~~~----i~~~~~~~~  234 (269)
T d2java1         164 LNHDTS--FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS---QKELAGK----IREGKFRRI  234 (269)
T ss_dssp             C-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHH----HHHTCCCCC
T ss_pred             cccCCC--ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC---HHHHHHH----HHcCCCCCC
Confidence            643322  2334679999999999999999999999999999999999999985432   2222222    122222211


Q ss_pred             ccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          619 IDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       619 ~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..     ..+    ..+.+++.+||+.||.+|||++|+++
T Consensus       235 ~~-----~~s----~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         235 PY-----RYS----DELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             CT-----TSC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             Cc-----ccC----HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            11     112    24667889999999999999999975

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-48  Score=391.77  Aligned_cols=253  Identities=25%  Similarity=0.394  Sum_probs=209.5

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.++||+|+||+||+|+.++++.||||+++... ...++|.+|+.++++++|||||++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            6899999999999999999999888899999987533 345789999999999999999999999999999999999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +|+|.+++....  ..+++..+.+++.||++||+|||+.+   |+||||||+||||++++.+||+|||+++.+...... 
T Consensus        83 ~g~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~~LH~~~---iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~-  156 (258)
T d1k2pa_          83 NGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-  156 (258)
T ss_dssp             TEEHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHTT---BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC-
T ss_pred             CCcHHHhhhccc--cCCcHHHHHHHHHHHHHHHHHHhhcC---cccccccceeEEEcCCCcEEECcchhheeccCCCce-
Confidence            999999985543  45889999999999999999999988   999999999999999999999999999876543322 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||......   +......    .+......+     
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~---~~~~~i~----~~~~~~~p~-----  224 (258)
T d1k2pa_         157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETAEHIA----QGLRLYRPH-----  224 (258)
T ss_dssp             CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHHHHHH----TTCCCCCCT-----
T ss_pred             eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH---HHHHHHH----hCCCCCCcc-----
Confidence            2333578999999999999999999999999999999998 88887644322   2222211    211111100     


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ..+    ..+.+++..||+.||++|||++||++.|..
T Consensus       225 ~~~----~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         225 LAS----EKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             TCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             ccc----HHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            111    246689999999999999999999999864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-48  Score=398.32  Aligned_cols=257  Identities=27%  Similarity=0.407  Sum_probs=202.7

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMP  466 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~  466 (706)
                      ++|++.+.||+|+||.||+|++++++.||||++... ....+.|.+|+.++++++|||||++++++. .+..++||||++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~   94 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   94 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecC
Confidence            679999999999999999999988889999999653 334578999999999999999999999985 456899999999


Q ss_pred             CCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc
Q 005236          467 NKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG  546 (706)
Q Consensus       467 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~  546 (706)
                      +|+|..++.... ...+++..++.++.||+.||+|||+.+   |+||||||+||||++++++||+|||+++.+...... 
T Consensus        95 ~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~---ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~-  169 (285)
T d1fmka3          95 KGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-  169 (285)
T ss_dssp             TCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             CCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhhh---eecccccceEEEECCCCcEEEcccchhhhccCCCce-
Confidence            999999886543 245899999999999999999999988   999999999999999999999999999876433322 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccCc
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDS  626 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  626 (706)
                      ......||+.|+|||++....++.++||||||+++|||++|..|+....  ...+......    .+......     ..
T Consensus       170 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~--~~~~~~~~i~----~~~~~~~~-----~~  238 (285)
T d1fmka3         170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVE----RGYRMPCP-----PE  238 (285)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHH----TTCCCCCC-----TT
T ss_pred             eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCC--CHHHHHHHHH----hcCCCCCC-----cc
Confidence            2233578999999999999999999999999999999999776643322  2222222221    11111111     11


Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          627 FNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       627 ~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      .+    ..+.+++.+||+.||++||||++|+++|+....
T Consensus       239 ~~----~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         239 CP----ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             SC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             cC----HHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence            11    246689999999999999999999999987643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-48  Score=399.07  Aligned_cols=259  Identities=27%  Similarity=0.422  Sum_probs=200.4

Q ss_pred             cCCCccceeccCCceeEEEEEeCCC-----cEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADE-----QEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      +.|++.++||+|+||.||+|.++..     ..||||++.. ......++|.+|+.++++++|||||++++++.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            4688889999999999999987542     3699999865 344556689999999999999999999999999999999


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ||||+.+++|.+++....  ..+++..+++++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.+.
T Consensus        87 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~i~~gl~~lH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~  161 (283)
T d1mqba_          87 ITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE  161 (283)
T ss_dssp             EEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             EEEecccCcchhhhhccc--ccccHHHHHHHHHHHHHhhhhccccc---cccCccccceEEECCCCeEEEcccchhhccc
Confidence            999999999999885433  45899999999999999999999988   9999999999999999999999999999865


Q ss_pred             CCCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ...... ......||+.|||||++.+..++.++|||||||++|||++|..|+....  ........    +..+......
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~--~~~~~~~~----i~~~~~~~~~  235 (283)
T d1mqba_         162 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--SNHEVMKA----INDGFRLPTP  235 (283)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHH----HHTTCCCCCC
T ss_pred             CCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccC--CHHHHHHH----HhccCCCCCc
Confidence            432222 2333568999999999999999999999999999999999766643221  11222222    2222211111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      .         .....+.+|+.+||+.+|++||||.||+++|+.++.
T Consensus       236 ~---------~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         236 M---------DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             T---------TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             h---------hhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            1         111356789999999999999999999999987654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-48  Score=406.54  Aligned_cols=257  Identities=30%  Similarity=0.441  Sum_probs=205.2

Q ss_pred             cCCCccceeccCCceeEEEEEeCC------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCee
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD------EQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  458 (706)
                      ++|++.++||+|+||+||+|++..      ...||||++... .....+.+.+|+.++.++ +|||||++++++.+.+..
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~  116 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI  116 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence            679999999999999999998743      236899998653 344456789999999998 899999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccc--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCC
Q 005236          459 LLIYEFMPNKSLDSFIFDQER--------------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKAS  518 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~  518 (706)
                      ++||||+++|+|.++|.....                    ...+++..++.++.||++||+|||+++   |+||||||+
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~---IiHRDlKp~  193 (325)
T d1rjba_         117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAAR  193 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSGG
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCchh
Confidence            999999999999999975432                    235899999999999999999999988   999999999


Q ss_pred             cEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCC
Q 005236          519 NVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSD  597 (706)
Q Consensus       519 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~  597 (706)
                      |||++.++++||+|||+|+...............||+.|||||++.+..++.++|||||||+||||+| |+.||......
T Consensus       194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~  273 (325)
T d1rjba_         194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD  273 (325)
T ss_dssp             GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             ccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999999987654443333345678999999999999999999999999999999998 89998644332


Q ss_pred             CchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhc
Q 005236          598 NKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLG  661 (706)
Q Consensus       598 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~  661 (706)
                      ..  +..    ....+...+...     ..    ...+.+|+.+||+.||++|||++||+++|.
T Consensus       274 ~~--~~~----~~~~~~~~~~p~-----~~----~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         274 AN--FYK----LIQNGFKMDQPF-----YA----TEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HH--HHH----HHHTTCCCCCCT-----TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HH--HHH----HHhcCCCCCCCC-----cC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            21  111    111211111110     11    124668999999999999999999999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-49  Score=400.90  Aligned_cols=251  Identities=27%  Similarity=0.383  Sum_probs=204.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~  465 (706)
                      +.|++.++||+|+||.||+|+.. +++.||||++........+.+.+|+.++++++|||||++++++.+.+..++||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            57899999999999999999985 58899999997766667788999999999999999999999999999999999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++|+|.+++.+..  ..+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+|+.....  .
T Consensus        92 ~~g~L~~~~~~~~--~~l~e~~~~~i~~qi~~gL~ylH~~~---ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~--~  164 (288)
T d2jfla1          92 AGGAVDAVMLELE--RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--I  164 (288)
T ss_dssp             TTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECHHH--H
T ss_pred             CCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEEeecChhheeECCCCCEEEEechhhhccCCC--c
Confidence            9999999986432  45899999999999999999999998   999999999999999999999999999764221  1


Q ss_pred             ccccccccccCccCccccc-----cCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          546 GNTNRVVGTYGYMAPEYAS-----DGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      .......||+.|||||++.     ...++.++|||||||++|||++|+.||......   +.....   ..... ..+..
T Consensus       165 ~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~---~~~~~i---~~~~~-~~~~~  237 (288)
T d2jfla1         165 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM---RVLLKI---AKSEP-PTLAQ  237 (288)
T ss_dssp             HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG---GHHHHH---HHSCC-CCCSS
T ss_pred             ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH---HHHHHH---HcCCC-CCCCc
Confidence            1223467999999999984     456899999999999999999999998644322   222211   11111 11111


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +   ...+    ..+.+++.+||+.||.+|||++|+++
T Consensus       238 ~---~~~s----~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         238 P---SRWS----SNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             G---GGSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             c---ccCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0   0111    24567899999999999999999976

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-48  Score=395.72  Aligned_cols=255  Identities=27%  Similarity=0.410  Sum_probs=205.5

Q ss_pred             cCCCccc-eeccCCceeEEEEEeC---CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINK-KLGEGGFGPVYKGTLA---DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|.+.+ +||+|+||+||+|.++   ++..||||+++.. .....++|.+|+.++++++|||||++++++.. +..++|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            5667777 4999999999999864   3457999999753 45557889999999999999999999999864 568999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++...  ...+++..+++++.||++||+|||+++   |+||||||+||||+.++.+||+|||+++.+..
T Consensus        87 mE~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~  161 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA  161 (285)
T ss_dssp             EECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEeCCCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCcCchhheeeccCCceeeccchhhhcccc
Confidence            9999999999998543  245899999999999999999999988   99999999999999999999999999998754


Q ss_pred             CCCc-ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          542 DETE-GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       542 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      .... .......||+.|||||++....++.++|||||||++|||+| |+.||......   +....    +..+...++.
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~---~~~~~----i~~~~~~~~p  234 (285)
T d1u59a_         162 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAF----IEQGKRMECP  234 (285)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHHH----HHTTCCCCCC
T ss_pred             cccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH---HHHHH----HHcCCCCCCC
Confidence            4322 22334568999999999999999999999999999999998 89998643321   22221    2222221211


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .     ..+    ..+.+|+.+||+.+|++||||.+|++.|+..
T Consensus       235 ~-----~~~----~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         235 P-----ECP----PELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             T-----TCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C-----cCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            1     111    2456799999999999999999999998753

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-48  Score=393.25  Aligned_cols=247  Identities=29%  Similarity=0.404  Sum_probs=196.6

Q ss_pred             ceeccCCceeEEEEEeCC---CcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEecCCC
Q 005236          393 KKLGEGGFGPVYKGTLAD---EQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEFMPN  467 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~  467 (706)
                      ++||+|+||+||+|.+.+   ++.||||+++..  .....++|.+|+.++++++|||||+++++|.. +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            579999999999998643   467999998652  33446789999999999999999999999864 567899999999


Q ss_pred             CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCcc-
Q 005236          468 KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-  546 (706)
Q Consensus       468 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~-  546 (706)
                      |+|.+++...   ..+++..++.++.||++||+|||+.+   |+||||||+||||+.++.+||+|||+++.+....... 
T Consensus        92 g~L~~~l~~~---~~l~~~~~~~i~~qi~~gl~ylH~~~---iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~  165 (277)
T d1xbba_          92 GPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  165 (277)
T ss_dssp             EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred             CcHHHHHhhc---cCCCHHHHHHHHHHHHHHHhhHHhCC---cccCCCcchhhcccccCcccccchhhhhhccccccccc
Confidence            9999999653   34899999999999999999999988   9999999999999999999999999999875443322 


Q ss_pred             cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccccC
Q 005236          547 NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFKD  625 (706)
Q Consensus       547 ~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  625 (706)
                      ......||+.|||||.+.+..++.++|||||||++|||+| |+.||.....   .+...    .+..+.......     
T Consensus       166 ~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~---~~~~~----~i~~~~~~~~p~-----  233 (277)
T d1xbba_         166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG---SEVTA----MLEKGERMGCPA-----  233 (277)
T ss_dssp             C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHHH----HHHTTCCCCCCT-----
T ss_pred             cccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH---HHHHH----HHHcCCCCCCCc-----
Confidence            2334578999999999999999999999999999999998 8999764322   12221    122222111111     


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          626 SFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       626 ~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ..+    ..+.+|+.+||+.||++|||+++|+++|+.
T Consensus       234 ~~~----~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         234 GCP----REMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             TCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             ccC----HHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            111    246679999999999999999999998874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-48  Score=404.52  Aligned_cols=199  Identities=26%  Similarity=0.369  Sum_probs=176.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.++||+|+||+||+|+.. +++.||+|+++.. .....+.+.+|+.++++++|||||++++++.+.+..++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            478999999999999999999984 5889999998653 34446789999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      |+++|+|.+++.+.   ..+++..+..++.||+.||.|||+. +   |+||||||+||||++++++||+|||+|+.+.. 
T Consensus        85 y~~gg~L~~~l~~~---~~l~~~~~~~~~~qil~aL~yLH~~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~-  157 (322)
T d1s9ja_          85 HMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-  157 (322)
T ss_dssp             CCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH-
T ss_pred             cCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEccccCHHHeeECCCCCEEEeeCCCccccCC-
Confidence            99999999999654   3489999999999999999999974 6   99999999999999999999999999987532 


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFY  594 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~  594 (706)
                         ......+||+.|||||++.+..++.++||||+||++|||++|+.||...
T Consensus       158 ---~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~  206 (322)
T d1s9ja_         158 ---SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  206 (322)
T ss_dssp             ---HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred             ---CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence               1223468999999999999999999999999999999999999998643

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-47  Score=385.15  Aligned_cols=247  Identities=24%  Similarity=0.391  Sum_probs=196.0

Q ss_pred             CCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEe----CCeeEEE
Q 005236          389 FSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIH----GEEKLLI  461 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV  461 (706)
                      |++.++||+|+||+||+|++. +++.||+|++..  ......+.+.+|++++++++|||||++++++.+    ....++|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            366789999999999999985 578999999864  345556789999999999999999999999875    3457999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc-CCCCeEEeeeccccccC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD-QDMNPKISDFGLARAFG  540 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~-~~~~~kl~Dfgla~~~~  540 (706)
                      |||+++|+|.+++.+.   ..+++..+..++.||++||+|||+++ .+|+||||||+||||+ +++.+||+|||+|+...
T Consensus        91 mE~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~  166 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  166 (270)
T ss_dssp             EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EeCCCCCcHHHHHhcc---ccccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence            9999999999999653   35899999999999999999999874 3599999999999996 57999999999998643


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ..    ......||+.|||||++.+ .++.++|||||||++|||++|+.||.....  ....    .+.+..+..+..++
T Consensus       167 ~~----~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~--~~~~----~~~i~~~~~~~~~~  235 (270)
T d1t4ha_         167 AS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQI----YRRVTSGVKPASFD  235 (270)
T ss_dssp             TT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHH----HHHHTTTCCCGGGG
T ss_pred             CC----ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc--HHHH----HHHHHcCCCCcccC
Confidence            22    2234679999999999865 699999999999999999999999853221  1111    11222222211111


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                          ....    ..+.+++.+||+.||++|||++|+++
T Consensus       236 ----~~~~----~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         236 ----KVAI----PEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             ----GCCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----ccCC----HHHHHHHHHHccCCHhHCcCHHHHhC
Confidence                1111    13567899999999999999999976

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.6e-48  Score=399.11  Aligned_cols=263  Identities=26%  Similarity=0.403  Sum_probs=210.8

Q ss_pred             HHhccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC
Q 005236          383 ANATDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG  455 (706)
Q Consensus       383 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  455 (706)
                      +...++|++.++||+|+||+||+|+.+      +++.||||++... ..+..++|.+|+.++++++||||+++++++...
T Consensus         9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~   88 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG   88 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccC
Confidence            334578999999999999999999864      3578999999753 344567899999999999999999999999999


Q ss_pred             CeeEEEEecCCCCChhhhhhccc---------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecc
Q 005236          456 EEKLLIYEFMPNKSLDSFIFDQE---------------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRD  514 (706)
Q Consensus       456 ~~~~lV~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~D  514 (706)
                      +..++||||+++|+|.++|+...                     ....+++..++.++.||+.||+|||+++   |+|||
T Consensus        89 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---ivHrD  165 (301)
T d1lufa_          89 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRD  165 (301)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred             CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC---eEeeE
Confidence            99999999999999999996422                     1234889999999999999999999988   99999


Q ss_pred             cCCCcEEEcCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCC-CCCC
Q 005236          515 LKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKK-NRGF  593 (706)
Q Consensus       515 ikp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~-p~~~  593 (706)
                      |||+||||+.++.+||+|||+|+...............||+.|+|||.+.+..++.++|||||||++|||++|.. |+..
T Consensus       166 lKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~  245 (301)
T d1lufa_         166 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  245 (301)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             EcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence            999999999999999999999987654443334445678999999999999999999999999999999999964 5433


Q ss_pred             CCCCCchhHHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          594 YHSDNKLNLIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       594 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                      .   ...+....    ...+....+.+     ...    ..+.+|+.+||+.+|.+||||.||+++|+++.
T Consensus       246 ~---~~~e~~~~----v~~~~~~~~p~-----~~~----~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         246 M---AHEEVIYY----VRDGNILACPE-----NCP----LELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             S---CHHHHHHH----HHTTCCCCCCT-----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             C---CHHHHHHH----HHcCCCCCCCc-----cch----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            2   22222222    22222222211     111    24678999999999999999999999998764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.3e-47  Score=402.92  Aligned_cols=253  Identities=23%  Similarity=0.322  Sum_probs=207.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.++||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            468999999999999999999984 5889999999877777778899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc--CCCCeEEeeeccccccCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD--QDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~--~~~~~kl~Dfgla~~~~~~  542 (706)
                      +++|+|.+++.+.  ...+++..+..++.||+.||+|||+++   |+||||||+|||++  .++.+||+|||+|+.+...
T Consensus       105 ~~gg~L~~~l~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~  179 (350)
T d1koaa2         105 MSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  179 (350)
T ss_dssp             CCSCBHHHHHTCT--TSCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcC---CeeeeechhHeeeccCCCCeEEEeecchheecccc
Confidence            9999999998543  245899999999999999999999998   99999999999996  4688999999999876433


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .   ......||+.|||||++.+..++.++|||||||++|||++|+.||....   ..+........  ........   
T Consensus       180 ~---~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~---~~~~~~~i~~~--~~~~~~~~---  248 (350)
T d1koaa2         180 Q---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN---DDETLRNVKSC--DWNMDDSA---  248 (350)
T ss_dssp             S---CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHT--CCCSCCGG---
T ss_pred             c---ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCC---HHHHHHHHHhC--CCCCCccc---
Confidence            2   2334679999999999999999999999999999999999999985332   22222221111  11111100   


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      . ...+    ..+.+++.+||+.||.+|||++|+++.
T Consensus       249 ~-~~~s----~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         249 F-SGIS----EDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             G-GGCC----HHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             c-cCCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0 0111    245678999999999999999999984

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.7e-48  Score=397.76  Aligned_cols=255  Identities=23%  Similarity=0.320  Sum_probs=189.8

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc-hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS-EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .+.|++.++||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.++++++|||||++++++.+++..++|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            467999999999999999999985 58899999986532 2334678899999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc---CCCCeEEeeeccccccC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFG  540 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~---~~~~~kl~Dfgla~~~~  540 (706)
                      |+++|+|.++|...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||+.   +++.+||+|||+|+...
T Consensus        88 ~~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~  161 (307)
T d1a06a_          88 LVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED  161 (307)
T ss_dssp             CCCSCBHHHHHHTC---SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred             ccCCCcHHHhhhcc---cCCCHHHHHHHHHHHHHHHHhhhhce---eeeEEecccceeecccCCCceEEEeccceeEEcc
Confidence            99999999999653   45899999999999999999999988   99999999999994   57899999999998754


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ...   .....+||+.|||||++.+..++.++|||||||++|||++|+.||....   .........   .....  ...
T Consensus       162 ~~~---~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~---~~~~~~~i~---~~~~~--~~~  230 (307)
T d1a06a_         162 PGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN---DAKLFEQIL---KAEYE--FDS  230 (307)
T ss_dssp             --------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS---HHHHHHHHH---TTCCC--CCT
T ss_pred             CCC---eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCC---HHHHHHHHh---ccCCC--CCC
Confidence            322   2234679999999999999999999999999999999999999985322   122221111   11111  000


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH--hcC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM--LGS  662 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~--L~~  662 (706)
                      + .....+    ..+.+++.+||+.||.+|||++|+++.  +.+
T Consensus       231 ~-~~~~~s----~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         231 P-YWDDIS----DSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             T-TTTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             c-cccCCC----HHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence            0 001111    246678999999999999999999983  544

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.5e-47  Score=399.89  Aligned_cols=256  Identities=23%  Similarity=0.295  Sum_probs=208.6

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.++||+|+||.||+|+. .+|+.||||++........+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            46899999999999999999998 46899999999776666677889999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc--CCCCeEEeeeccccccCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD--QDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~--~~~~~kl~Dfgla~~~~~~  542 (706)
                      +++|+|.+++...  ...+++.++..++.||+.||+|||+.+   |+||||||+||||+  .++.+||+|||+|+.+...
T Consensus       108 ~~gg~L~~~~~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~  182 (352)
T d1koba_         108 LSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  182 (352)
T ss_dssp             CCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCCChHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccccccccccccCCCeEEEeecccceecCCC
Confidence            9999999887543  235899999999999999999999988   99999999999998  6789999999999987543


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .   ......||+.|||||++.+..++.++|||||||++|||++|+.||.....   .......... ..........  
T Consensus       183 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~---~~~~~~i~~~-~~~~~~~~~~--  253 (352)
T d1koba_         183 E---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD---LETLQNVKRC-DWEFDEDAFS--  253 (352)
T ss_dssp             S---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH---HHHHHHHHHC-CCCCCSSTTT--
T ss_pred             C---ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhC-CCCCCccccc--
Confidence            2   23346789999999999999999999999999999999999999854322   2222221111 0001111111  


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH--hcC
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM--LGS  662 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~--L~~  662 (706)
                         ..+    ..+.+|+.+||+.||.+|||++|+++.  +++
T Consensus       254 ---~~s----~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~  288 (352)
T d1koba_         254 ---SVS----PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG  288 (352)
T ss_dssp             ---TSC----HHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             ---CCC----HHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence               111    245678999999999999999999874  544

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.4e-47  Score=390.03  Aligned_cols=245  Identities=29%  Similarity=0.455  Sum_probs=199.5

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      +.|++.++||+|+||+||+|+.. +++.||||++...   .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            35899999999999999999974 5888999998653   2344567899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|..++...   ..+++..+..++.||+.||.|||+++   |+||||||+||||+.++.+||+|||+|+.... 
T Consensus        95 E~~~~g~l~~~~~~~---~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~-  167 (309)
T d1u5ra_          95 EYCLGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-  167 (309)
T ss_dssp             ECCSEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred             EecCCCchHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEECCCCCEEEeecccccccCC-
Confidence            999999998776433   45899999999999999999999998   99999999999999999999999999986532 


Q ss_pred             CCcccccccccccCccCcccccc---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASD---GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                           .....||+.|||||++.+   ..++.++|||||||++|||++|+.||....   ....+.   .......+ .+.
T Consensus       168 -----~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~---~~~~~~---~i~~~~~~-~~~  235 (309)
T d1u5ra_         168 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN---AMSALY---HIAQNESP-ALQ  235 (309)
T ss_dssp             -----BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC---HHHHHH---HHHHSCCC-CCS
T ss_pred             -----CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCC---HHHHHH---HHHhCCCC-CCC
Confidence                 223579999999999864   468999999999999999999999975322   122221   12222111 111


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      ..    ..+    ..+.+++.+||+.||.+|||++|+++
T Consensus       236 ~~----~~s----~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         236 SG----HWS----EYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             CT----TSC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CC----CCC----HHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            11    111    24667899999999999999999976

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-47  Score=389.32  Aligned_cols=251  Identities=22%  Similarity=0.299  Sum_probs=203.2

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc------hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS------EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      .++|++.++||+|+||+||+|+. .+|+.||||++.+..      ....+.+.+|+.++++++|||||++++++.+.+..
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            36799999999999999999998 468899999985421      22367899999999999999999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC----CeEEeeec
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM----NPKISDFG  534 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~----~~kl~Dfg  534 (706)
                      ++||||+++|+|.++|...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++    .+||+|||
T Consensus        89 ~iv~E~~~gg~L~~~i~~~---~~l~~~~~~~~~~qi~~al~yLH~~~---ivHrDiKp~Nill~~~~~~~~~vkl~DfG  162 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG  162 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEEcCCCccccchhccc---cccchhHHHHHHHHHHHHHHhhhhcc---eeecccccceEEEecCCCcccceEecchh
Confidence            9999999999999999654   35899999999999999999999998   99999999999999877    49999999


Q ss_pred             cccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      +|+.+....   ......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ..+......    ...
T Consensus       163 ~a~~~~~~~---~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~---~~~~~~~i~----~~~  232 (293)
T d1jksa_         163 LAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVS----AVN  232 (293)
T ss_dssp             TCEECTTSC---BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHH----TTC
T ss_pred             hhhhcCCCc---cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC---HHHHHHHHH----hcC
Confidence            998764322   2234578999999999999999999999999999999999999985422   222221111    111


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .. ...... ...+    ..+.+++.+||+.||.+|||++|+++
T Consensus       233 ~~-~~~~~~-~~~s----~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         233 YE-FEDEYF-SNTS----ALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             CC-CCHHHH-TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CC-CCchhc-CCCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            10 000000 1111    24567899999999999999999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-46  Score=390.23  Aligned_cols=255  Identities=27%  Similarity=0.408  Sum_probs=200.8

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-Cc----EEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQ----EIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLL  460 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  460 (706)
                      ++|++.++||+|+||+||+|++.. |+    +||+|++.. ...+..++|.+|+.++++++|||||+++++|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            469999999999999999998743 43    589998865 3445678899999999999999999999999864 5678


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccC
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG  540 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~  540 (706)
                      ++||+.+|+|.+++...  ...+++..+++++.||++||+|||+++   |+||||||+||||+.++++||+|||+|+.+.
T Consensus        88 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~~---iiHrDlKp~NIll~~~~~~kl~DFGla~~~~  162 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  162 (317)
T ss_dssp             EEECCTTCBHHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCCSHHHHTT
T ss_pred             EEEeccCCccccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHcC---cccCcchhhcceeCCCCCeEeeccccceecc
Confidence            89999999999988654  356899999999999999999999988   9999999999999999999999999999876


Q ss_pred             CCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc
Q 005236          541 GDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI  619 (706)
Q Consensus       541 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  619 (706)
                      ............||+.|||||++.+..++.++|||||||+||||+| |+.||......+   .......    +......
T Consensus       163 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~---~~~~i~~----~~~~~~p  235 (317)
T d1xkka_         163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEK----GERLPQP  235 (317)
T ss_dssp             TTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG---HHHHHHH----TCCCCCC
T ss_pred             cccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH---HHHHHHc----CCCCCCC
Confidence            5554444455678999999999999999999999999999999999 788875443322   2222111    1111110


Q ss_pred             cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          620 DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       620 d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .     ..    ...+.+++.+||+.||.+|||++||++.|...
T Consensus       236 ~-----~~----~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         236 P-----IC----TIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             T-----TB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             c-----cc----CHHHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence            0     11    12466799999999999999999999988754

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=388.33  Aligned_cols=261  Identities=28%  Similarity=0.403  Sum_probs=199.0

Q ss_pred             hccCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCc-cchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCC
Q 005236          385 ATDNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSK-ISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGE  456 (706)
Q Consensus       385 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  456 (706)
                      ..++|++.++||+|+||.||+|++.      .++.||||+++. ......+.+..|...+.++ +|+|||++++++.+.+
T Consensus        11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~   90 (299)
T d1ywna1          11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   90 (299)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence            3478999999999999999999863      246899999865 3444566788888888777 6899999999987654


Q ss_pred             -eeEEEEecCCCCChhhhhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          457 -EKLLIYEFMPNKSLDSFIFDQER-------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       457 -~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                       ..++||||+++|+|.++|.....             ...+++..++.++.||++||+|||+++   |+||||||+||||
T Consensus        91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---ivHrDlKp~NILl  167 (299)
T d1ywna1          91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILL  167 (299)
T ss_dssp             SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred             CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC---CcCCcCCccceeE
Confidence             68999999999999999975432             235889999999999999999999988   9999999999999


Q ss_pred             cCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCC-CCCCCCCCCCchh
Q 005236          523 DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK-KNRGFYHSDNKLN  601 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~-~p~~~~~~~~~~~  601 (706)
                      ++++++||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+||. .||......   .
T Consensus       168 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~---~  244 (299)
T d1ywna1         168 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---E  244 (299)
T ss_dssp             CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS---H
T ss_pred             CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH---H
Confidence            999999999999999775554444455578999999999999999999999999999999999975 455432221   1


Q ss_pred             HHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .+..   ....+......+.     .+    ..+.+++.+||+.||.+|||++||+++|+++
T Consensus       245 ~~~~---~~~~~~~~~~~~~-----~~----~~l~~li~~cl~~dP~~Rpt~~eil~~L~~i  294 (299)
T d1ywna1         245 EFCR---RLKEGTRMRAPDY-----TT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  294 (299)
T ss_dssp             HHHH---HHHHTCCCCCCTT-----CC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHH---HHhcCCCCCCCcc-----CC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            1111   1122222111111     11    2466889999999999999999999999865

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-46  Score=390.50  Aligned_cols=248  Identities=21%  Similarity=0.263  Sum_probs=203.9

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      .++|++.+.||+|+||.||+|+. .+++.||||++.+.   .....+.+.+|+.++++++|||||++++++.+.+..++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            36799999999999999999998 46899999998653   233467889999999999999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++....   .+++..+..++.||+.||+|||+++   |+||||||+|||++++|++||+|||+|+....
T Consensus        84 ~ey~~gg~L~~~~~~~~---~~~e~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_          84 MEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             eeccCCCchhhhhhccc---CCcHHHHHHHHHHHhhhhhhhhhcC---ccccccCHHHeEecCCCCEEEeeccccccccc
Confidence            99999999999986543   4788999999999999999999998   99999999999999999999999999987543


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ..  ......+||+.|||||++.+..++.++|||||||++|||++|+.||.....   ..+.....    .... .+.  
T Consensus       158 ~~--~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~---~~~~~~i~----~~~~-~~p--  225 (337)
T d1o6la_         158 DG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFELIL----MEEI-RFP--  225 (337)
T ss_dssp             TT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHH----HCCC-CCC--
T ss_pred             CC--cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH---HHHHHHHh----cCCC-CCC--
Confidence            22  223446899999999999999999999999999999999999999754322   22222111    1111 010  


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~  658 (706)
                         ...+    ..+.+|+..||+.||.+||+     ++|+++
T Consensus       226 ---~~~s----~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         226 ---RTLS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             ---TTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ---ccCC----HHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence               1122    24567999999999999995     777775

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-47  Score=380.78  Aligned_cols=249  Identities=26%  Similarity=0.387  Sum_probs=196.0

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-CeeEEEEecC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-EEKLLIYEFM  465 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e~~  465 (706)
                      ++|++.++||+|+||.||+|+++ |+.||||+++..  ...+.+.+|+.++++++|||||++++++.+. +..++||||+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~   83 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   83 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEecc
Confidence            57888999999999999999985 678999999653  3457899999999999999999999999654 5689999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++|+|.++|.... ...+++..+++++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+++.....   
T Consensus        84 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~---  156 (262)
T d1byga_          84 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---  156 (262)
T ss_dssp             TTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             CCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccCc---eeccccchHhheecCCCCEeecccccceecCCC---
Confidence            9999999996542 235899999999999999999999987   999999999999999999999999999865322   


Q ss_pred             ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccccc
Q 005236          546 GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACFK  624 (706)
Q Consensus       546 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  624 (706)
                        .....+|..|+|||++.+..++.++||||||+++|||+| |+.|+......   +.....    ..+...++.+    
T Consensus       157 --~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~---~~~~~i----~~~~~~~~~~----  223 (262)
T d1byga_         157 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRV----EKGYKMDAPD----  223 (262)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHHHHH----TTTCCCCCCT----
T ss_pred             --CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH---HHHHHH----HcCCCCCCCc----
Confidence              223567899999999999999999999999999999998 67776543222   222222    1222112211    


Q ss_pred             CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          625 DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       625 ~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                       ..+    .++.+++.+||+.||.+||||.||+++|+.+
T Consensus       224 -~~~----~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         224 -GCP----PAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             -TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -cCC----HHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence             111    2466889999999999999999999999764

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-46  Score=382.29  Aligned_cols=254  Identities=24%  Similarity=0.341  Sum_probs=195.0

Q ss_pred             cCCCccceeccCCceeEEEEEeCC----CcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD----EQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.+.||+|+||.||+|++..    +..||||++... .....+.+.+|+.++++++|||||++++++. .+..++|
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv   85 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII   85 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence            679999999999999999998743    346899998653 4445678999999999999999999999985 5678999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++...  ...+++..++.++.||++||.|||+.+   |+||||||+||++++++.+||+|||+|+.+..
T Consensus        86 ~E~~~~g~l~~~~~~~--~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~  160 (273)
T d1mp8a_          86 MELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  160 (273)
T ss_dssp             EECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             EEeccCCcHHhhhhcc--CCCCCHHHHHHHHHHHHHHhhhhcccC---eeccccchhheeecCCCcEEEccchhheeccC
Confidence            9999999999987543  245899999999999999999999988   99999999999999999999999999987643


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLID  620 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  620 (706)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++ |++|+......   +......    .+....+..
T Consensus       161 ~~~-~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~---~~~~~i~----~~~~~~~~~  232 (273)
T d1mp8a_         161 STY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGRIE----NGERLPMPP  232 (273)
T ss_dssp             -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHHHH----TTCCCCCCT
T ss_pred             Ccc-eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH---HHHHHHH----cCCCCCCCC
Confidence            322 22334678999999999999999999999999999999998 88887654332   2222222    111111111


Q ss_pred             ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          621 ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       621 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                           ..+    ..+.+|+.+||+.||.+|||++||++.|+.+
T Consensus       233 -----~~~----~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i  266 (273)
T d1mp8a_         233 -----NCP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTI  266 (273)
T ss_dssp             -----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                 111    2466899999999999999999999998764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-46  Score=388.10  Aligned_cols=257  Identities=27%  Similarity=0.420  Sum_probs=202.2

Q ss_pred             cCCCccceeccCCceeEEEEEeCC-Cc--EEEEEEcCc-cchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD-EQ--EIAVKRLSK-ISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.++||+|+||.||+|++++ +.  .||||++.. ......+.+.+|+.+++++ +|||||++++++.+++..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            689999999999999999999854 33  578888754 3444567899999999999 799999999999999999999


Q ss_pred             EecCCCCChhhhhhcc-------------cccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCe
Q 005236          462 YEFMPNKSLDSFIFDQ-------------ERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNP  528 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~  528 (706)
                      |||+++|+|.++|+..             .....+++..+++++.||++||.|||+.+   |+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~---iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC---ccccccccceEEEcCCCce
Confidence            9999999999999754             23456899999999999999999999988   9999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCC-CCCCCCCCCchhHHHHHH
Q 005236          529 KISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKK-NRGFYHSDNKLNLIRHAW  607 (706)
Q Consensus       529 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~-p~~~~~~~~~~~~~~~~~  607 (706)
                      ||+|||+++.....   .......||..|+|||.+.+..++.++|||||||++|||++|.. |+...   ........  
T Consensus       167 kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~---~~~~~~~~--  238 (309)
T d1fvra_         167 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM---TCAELYEK--  238 (309)
T ss_dssp             EECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC---CHHHHHHH--
T ss_pred             EEcccccccccccc---ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC---CHHHHHHH--
Confidence            99999999864321   22234568999999999999999999999999999999999765 44322   22222211  


Q ss_pred             HHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          608 KLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       608 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                        +..+.......     ..    ...+.+|+.+||+.||++||||+||++.|+.+..
T Consensus       239 --i~~~~~~~~~~-----~~----~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         239 --LPQGYRLEKPL-----NC----DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             --GGGTCCCCCCT-----TB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --HHhcCCCCCCc-----cC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence              12211111111     11    1256789999999999999999999999987743

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-46  Score=385.60  Aligned_cols=260  Identities=27%  Similarity=0.437  Sum_probs=211.3

Q ss_pred             cCCCccceeccCCceeEEEEEeC------CCcEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA------DEQEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      ++|++.++||+|+||.||+|.++      .++.||||+++. ........|.+|+.++++++|||||++++++...+..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            68899999999999999999874      257899999975 34455667999999999999999999999999999999


Q ss_pred             EEEecCCCCChhhhhhccc-------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEee
Q 005236          460 LIYEFMPNKSLDSFIFDQE-------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISD  532 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~D  532 (706)
                      +||||+++|+|.+++....       ....+++..+.+++.|+++||.|||+.+   |+||||||+||||++++++||+|
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~---ivHrDlk~~NiLld~~~~~Kl~D  176 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGD  176 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeeceEcCCceeecCCceEEEee
Confidence            9999999999999986432       2245789999999999999999999987   99999999999999999999999


Q ss_pred             eccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCC-CCCCCCCCCCchhHHHHHHHHhh
Q 005236          533 FGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGK-KNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       533 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      ||+++.+.............||+.|+|||.+.+..++.++||||||+++|||+||. .|+...   ........    +.
T Consensus       177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~---~~~~~~~~----i~  249 (308)
T d1p4oa_         177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL---SNEQVLRF----VM  249 (308)
T ss_dssp             TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS---CHHHHHHH----HH
T ss_pred             cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC---CHHHHHHH----HH
Confidence            99998775444444445567899999999999999999999999999999999986 554322   11122211    11


Q ss_pred             cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCCC
Q 005236          612 EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEIV  665 (706)
Q Consensus       612 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~~  665 (706)
                      .+......+     ..+    ..+.+++.+||+.+|.+||||++|+++|++..+
T Consensus       250 ~~~~~~~p~-----~~~----~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         250 EGGLLDKPD-----NCP----DMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             TTCCCCCCT-----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             hCCCCCCcc-----cch----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            222222111     111    257789999999999999999999999987643

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.9e-46  Score=387.53  Aligned_cols=244  Identities=25%  Similarity=0.321  Sum_probs=201.8

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||+||+|+.+ +|+.||||++++.   .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            57999999999999999999984 5899999998652   2334678999999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+++|+|..++...   ..+++..+..++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+|+.....
T Consensus        84 E~~~gg~l~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_          84 DYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             CCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             eecCCcccccccccc---ccccccHHHHHHHHHHHhhhhhccCc---EEccccCchheeEcCCCCEEEecCccceEeccc
Confidence            999999999988654   34788888999999999999999988   999999999999999999999999999876432


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                           .....||+.|||||++.+..++.++|||||||+||||++|+.||....   ...........  ....+.     
T Consensus       158 -----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~---~~~~~~~i~~~--~~~~p~-----  222 (316)
T d1fota_         158 -----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN---TMKTYEKILNA--ELRFPP-----  222 (316)
T ss_dssp             -----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS---HHHHHHHHHHC--CCCCCT-----
T ss_pred             -----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcC---HHHHHHHHHcC--CCCCCC-----
Confidence                 234689999999999999999999999999999999999999985422   22222221111  111111     


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCC-----ChhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRP-----CMPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----t~~ev~~  658 (706)
                         ..+    ..+.+++.+||+.||.+||     |++|+++
T Consensus       223 ---~~s----~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         223 ---FFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             ---TSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             ---CCC----HHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence               111    2356788999999999996     8999986

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-45  Score=388.68  Aligned_cols=244  Identities=21%  Similarity=0.239  Sum_probs=202.7

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~  462 (706)
                      ++|++.++||+|+||.||+|+.+ +|+.||||++.+.   .....+.+.+|+.+++.++|||||++++++.+....++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            58999999999999999999984 5899999998642   2334577899999999999999999999999999999999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGD  542 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~  542 (706)
                      ||+.+|+|..++....   .+++..+..++.||+.||.|||+++   |+||||||+||||+.++++||+|||+|+.+...
T Consensus       121 e~~~~g~l~~~l~~~~---~l~e~~~~~i~~qi~~aL~yLH~~~---iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             ECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             ccccccchhhhHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence            9999999999996543   4899999999999999999999998   999999999999999999999999999986432


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                           .....||+.|||||++.+..++.++|||||||++|||++|+.||...   ..........   .. ... ..   
T Consensus       195 -----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~---~~~~~~~~i~---~~-~~~-~p---  258 (350)
T d1rdqe_         195 -----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD---QPIQIYEKIV---SG-KVR-FP---  258 (350)
T ss_dssp             -----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS---SHHHHHHHHH---HC-CCC-CC---
T ss_pred             -----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCc---CHHHHHHHHh---cC-CCC-CC---
Confidence                 23467999999999999999999999999999999999999998532   2222222211   11 110 00   


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCC-----CChhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDR-----PCMPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~R-----Pt~~ev~~  658 (706)
                        ...+    ..+.+++.+||+.||.+|     ||++|+++
T Consensus       259 --~~~s----~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         259 --SHFS----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             --TTCC----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             --ccCC----HHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence              1111    245678999999999999     48999986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-46  Score=379.65  Aligned_cols=255  Identities=26%  Similarity=0.380  Sum_probs=195.4

Q ss_pred             cCCCccceeccCCceeEEEEEeCC--C--cEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD--E--QEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  459 (706)
                      ++|++.+.||+|+||.||+|+...  +  ..||||++.+.   .....+.|.+|+.++++++|||||++++++.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            569999999999999999998632  2  36899998653   34456789999999999999999999999965 5678


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      +||||+++|+|.+++....  ..+++..+++++.||++||.|||+++   |+||||||+||||+.++.+||+|||+++.+
T Consensus        87 lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDikp~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeeeeecCcchhhhhhccc--CCCCHHHHHHHHHHHHHHHHHhhhCC---EeeeeecHHHhccccccceeeccchhhhhc
Confidence            9999999999999886543  45899999999999999999999988   999999999999999999999999999987


Q ss_pred             CCCCCcc-cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          540 GGDETEG-NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       540 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ....... ......||..|+|||++.+..++.++||||||+++|||+| |+.||.....   .+...   .....+...+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~---~~~~~---~i~~~~~~~~  235 (273)
T d1u46a_         162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---SQILH---KIDKEGERLP  235 (273)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHH---HHHTSCCCCC
T ss_pred             ccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCH---HHHHH---HHHhCCCCCC
Confidence            5443322 2334567889999999999999999999999999999998 8999753222   22222   2222222211


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcC
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGS  662 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~  662 (706)
                      ..+     ..+    ..+.+++.+||+.||.+||||+||+++|++
T Consensus       236 ~~~-----~~~----~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         236 RPE-----DCP----QDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             CCT-----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             Ccc-----ccc----HHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            111     111    246679999999999999999999999975

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-46  Score=383.93  Aligned_cols=259  Identities=29%  Similarity=0.417  Sum_probs=207.1

Q ss_pred             cCCCccceeccCCceeEEEEEeCC--------CcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCC
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLAD--------EQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGE  456 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  456 (706)
                      ++|++.++||+|+||.||+|+...        +..||||+++.. ......++.+|...+.++ +|||||+++++|.+++
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~   92 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   92 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence            689999999999999999998632        347999999763 345567889999999888 7999999999999999


Q ss_pred             eeEEEEecCCCCChhhhhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQER-------------CKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD  523 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~  523 (706)
                      ..++||||+++|+|.++|.....             ...+++..+++++.||+.||+|||+.+   |+||||||+|||++
T Consensus        93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~---ivHrDiKp~NiLl~  169 (299)
T d1fgka_          93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVT  169 (299)
T ss_dssp             SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC
T ss_pred             eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC---EEeeeecccceeec
Confidence            99999999999999999965431             245899999999999999999999998   99999999999999


Q ss_pred             CCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCchhH
Q 005236          524 QDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVS-GKKNRGFYHSDNKLNL  602 (706)
Q Consensus       524 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~ellt-G~~p~~~~~~~~~~~~  602 (706)
                      .++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....   .. 
T Consensus       170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~---~~-  245 (299)
T d1fgka_         170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---EE-  245 (299)
T ss_dssp             TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---HH-
T ss_pred             CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH---HH-
Confidence            999999999999998765555445555779999999999999999999999999999999998 6777643222   11 


Q ss_pred             HHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCCC
Q 005236          603 IRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSEI  664 (706)
Q Consensus       603 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~~  664 (706)
                         ....+..+.......     ...    ..+.+|+.+||+.||++|||+.||++.|+++.
T Consensus       246 ---~~~~i~~~~~~~~p~-----~~~----~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         246 ---LFKLLKEGHRMDKPS-----NCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             ---HHHHHHTTCCCCCCS-----SCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---HHHHHHcCCCCCCCc-----cch----HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence               122222222222111     111    24678999999999999999999999998763

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=383.60  Aligned_cols=260  Identities=28%  Similarity=0.399  Sum_probs=209.8

Q ss_pred             ccCCCccceeccCCceeEEEEEe------CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhc-CCcceeeeEeEEEeCCe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL------ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKL-QHRNLVKLLGCCIHGEE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  457 (706)
                      .++|++.++||+|+||.||+|++      ..++.||||+++.. ......++.+|+.+++++ +|||||++++++.+.+.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            36899999999999999999985      23568999999753 445566899999999999 69999999999999999


Q ss_pred             eEEEEecCCCCChhhhhhccc---------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEE
Q 005236          458 KLLIYEFMPNKSLDSFIFDQE---------------RCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLL  522 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~---------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill  522 (706)
                      .++||||+++|+|.++|+...               ....+++..+++++.||++||+|||+++   ++||||||+|||+
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~---ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccccccccc
Confidence            999999999999999997542               2235889999999999999999999998   9999999999999


Q ss_pred             cCCCCeEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCC-CCCCCCCCchh
Q 005236          523 DQDMNPKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKN-RGFYHSDNKLN  601 (706)
Q Consensus       523 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p-~~~~~~~~~~~  601 (706)
                      +.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+|+..| +......+   
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~---  255 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS---  255 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHH---
Confidence            99999999999999987654444444557899999999999999999999999999999999995544 43322221   


Q ss_pred             HHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .+..   ....+.......     ..    ...+.+|+.+||+.||.+||||+||+++|++.
T Consensus       256 ~~~~---~i~~~~~~~~~~-----~~----~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         256 KFYK---MIKEGFRMLSPE-----HA----PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             HHHH---HHHHTCCCCCCT-----TS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHH---HHhcCCCCCCcc-----cc----cHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            1111   111111111110     11    12467899999999999999999999999864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.1e-46  Score=379.32  Aligned_cols=257  Identities=22%  Similarity=0.335  Sum_probs=199.4

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc---chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC----e
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI---SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE----E  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~  457 (706)
                      .++|++.+.||+|+||.||+|+. .+++.||||+++..   .....+.+.+|+.++++++|||||++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            46899999999999999999997 46889999999653   3444668999999999999999999999998654    3


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+++++|.+++...   ..+++.+++.++.||+.||+|||+++   |+||||||+||||+.++..+|+|||.++
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~---~~l~~~~~~~i~~qi~~al~~lH~~~---iiHrDiKP~NIll~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  159 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred             EEEEEECCCCCEehhhhccc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCccccCcccccCccccceeehhhhhh
Confidence            78999999999999988554   35899999999999999999999988   9999999999999999999999999998


Q ss_pred             ccCCCCC-cccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC-
Q 005236          538 AFGGDET-EGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP-  615 (706)
Q Consensus       538 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-  615 (706)
                      ....... ........||+.|||||++.+..++.++|||||||++|||+||+.||....   ....   .......... 
T Consensus       160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~---~~~~---~~~~~~~~~~~  233 (277)
T d1o6ya_         160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS---PVSV---AYQHVREDPIP  233 (277)
T ss_dssp             ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS---HHHH---HHHHHHCCCCC
T ss_pred             hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcC---HHHH---HHHHHhcCCCC
Confidence            6543222 223344679999999999999999999999999999999999999985322   1121   2222222221 


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCC-ChhHHHHHhcC
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRP-CMPSVILMLGS  662 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-t~~ev~~~L~~  662 (706)
                      .....    ...+    ..+.+++.+||+.||.+|| |+++++..|..
T Consensus       234 ~~~~~----~~~s----~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         234 PSARH----EGLS----ADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             GGGTS----SSCC----HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             Cchhc----cCCC----HHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            11111    1111    2456789999999999999 89999888764

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.2e-45  Score=375.44  Aligned_cols=252  Identities=22%  Similarity=0.330  Sum_probs=201.5

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc---------hhhHHHHHHHHHHHhhcC-CcceeeeEeEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS---------EQGLKELKNEIILFSKLQ-HRNLVKLLGCCIH  454 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~  454 (706)
                      .++|++.+.||+|+||+||+|+. .+++.||||++....         ....+.+.+|+.++++++ |||||++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            36899999999999999999998 468899999986422         122356889999999997 9999999999999


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                      .+..++||||+++|+|.++|...   ..+++..+..++.||++||+|||+++   |+||||||+||||+.++.+||+|||
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~~kl~DFG  155 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFG  155 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCT
T ss_pred             CcceEEEEEcCCCchHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcC---CcccccccceEEEcCCCCeEEccch
Confidence            99999999999999999999653   35899999999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCCCcccccccccccCccCcccccc------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHH
Q 005236          535 LARAFGGDETEGNTNRVVGTYGYMAPEYASD------GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWK  608 (706)
Q Consensus       535 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~  608 (706)
                      +++.+....   ......||+.|+|||++.+      ..++.++||||+||++|||++|+.||....   .......   
T Consensus       156 ~a~~~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~---~~~~~~~---  226 (277)
T d1phka_         156 FSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK---QMLMLRM---  226 (277)
T ss_dssp             TCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHH---
T ss_pred             heeEccCCC---ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCC---HHHHHHH---
Confidence            999875432   2233679999999999853      357889999999999999999999986432   1121111   


Q ss_pred             HhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          609 LWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       609 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ... +... ...+.. ...+    ..+.+++.+||+.||.+|||++||++.
T Consensus       227 i~~-~~~~-~~~~~~-~~~s----~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         227 IMS-GNYQ-FGSPEW-DDYS----DTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             HHH-TCCC-CCTTTG-GGSC----HHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHh-CCCC-CCCccc-ccCC----HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            111 1111 000000 0111    246678999999999999999998753

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-45  Score=380.90  Aligned_cols=252  Identities=27%  Similarity=0.413  Sum_probs=200.6

Q ss_pred             cceeccCCceeEEEEEeCCC----cEEEEEEcCc-cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-CeeEEEEecC
Q 005236          392 NKKLGEGGFGPVYKGTLADE----QEIAVKRLSK-ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-EEKLLIYEFM  465 (706)
Q Consensus       392 ~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e~~  465 (706)
                      .++||+|+||+||+|++.++    ..||||+++. ......++|.+|+.++++++|||||++++++.+. ...++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            47899999999999998542    2589999975 4566678899999999999999999999998764 5789999999


Q ss_pred             CCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCCc
Q 005236          466 PNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETE  545 (706)
Q Consensus       466 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~~  545 (706)
                      ++|+|.+++...  ...+++..+++++.|+++||.|||+.+   |+||||||+||||++++.+||+|||+++........
T Consensus       112 ~~g~l~~~~~~~--~~~~~~~~~~~i~~qia~gL~~lH~~~---iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~  186 (311)
T d1r0pa_         112 KHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  186 (311)
T ss_dssp             TTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred             ecCchhhhhccc--cccchHHHHHHHHHHHHHhhhhhcccC---cccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence            999999998643  345778889999999999999999988   999999999999999999999999999987543322


Q ss_pred             c--cccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccccc
Q 005236          546 G--NTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDACF  623 (706)
Q Consensus       546 ~--~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  623 (706)
                      .  ......||+.|+|||.+....++.++||||||+++|||+||+.|+.....  .........    .+......+   
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~--~~~~~~~i~----~g~~~~~p~---  257 (311)
T d1r0pa_         187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN--TFDITVYLL----QGRRLLQPE---  257 (311)
T ss_dssp             CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHHHHH----TTCCCCCCT---
T ss_pred             cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCC--HHHHHHHHH----cCCCCCCcc---
Confidence            2  23335789999999999999999999999999999999998887643221  111111111    111111101   


Q ss_pred             cCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          624 KDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       624 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                        ..    ...+.+++.+||+.||++||+|.||++.|+++
T Consensus       258 --~~----~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i  291 (311)
T d1r0pa_         258 --YC----PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  291 (311)
T ss_dssp             --TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --cC----cHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence              11    12466899999999999999999999999876

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=381.64  Aligned_cols=268  Identities=23%  Similarity=0.276  Sum_probs=199.6

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC----eeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE----EKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV~  462 (706)
                      ++|.+.++||+|+||.||+|++ +|+.||||++...... ....+.|+..+.+++|||||++++++.+.+    ..++||
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~-~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~   80 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence            4678889999999999999997 5789999998643221 222344555667889999999999998754    578999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQD-----SRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      ||+++|+|.++|++.    .++|..+++++.|+|.||+|||+.     ...+|+||||||+||||+.++.+||+|||+++
T Consensus        81 Ey~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~  156 (303)
T d1vjya_          81 DYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             ECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             ecccCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence            999999999999653    488999999999999999999974     12459999999999999999999999999999


Q ss_pred             ccCCCCC--cccccccccccCccCccccccCC------CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc--------hh
Q 005236          538 AFGGDET--EGNTNRVVGTYGYMAPEYASDGQ------FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNK--------LN  601 (706)
Q Consensus       538 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~------~s~~sDv~SlGvil~elltG~~p~~~~~~~~~--------~~  601 (706)
                      .......  ........||+.|||||++.+..      ++.++|||||||+||||+||..|+........        ..
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~  236 (303)
T d1vjya_         157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence            8744322  22334567999999999987653      67799999999999999999887643221110        01


Q ss_pred             HHHHHHHHhhcCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          602 LIRHAWKLWNEGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ..............+.-+..   .....+....+.+++.+||+.||++|||+.||++.|+.+
T Consensus       237 ~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i  295 (303)
T d1vjya_         237 SVEEMRKVVCEQKLRPNIPN---RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             CHHHHHHHHTTSCCCCCCCG---GGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHhccccCCCCCc---ccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            11222222222222111111   111223455677899999999999999999999999765

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-46  Score=385.73  Aligned_cols=247  Identities=25%  Similarity=0.359  Sum_probs=199.9

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCcc---chhhHHHHHHHHHHHh-hcCCcceeeeEeEEEeCCeeEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKI---SEQGLKELKNEIILFS-KLQHRNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~lV  461 (706)
                      ++|++.++||+|+||+||+|+.. +++.||||++++.   .....+.+..|..++. .++|||||++++++.+++..++|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            68999999999999999999985 5889999999652   2334556667777665 68999999999999999999999


Q ss_pred             EecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCC
Q 005236          462 YEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGG  541 (706)
Q Consensus       462 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~  541 (706)
                      |||+++|+|.+++....   .+++..+..++.||+.||+|||+++   |+||||||+|||+++++++||+|||+++....
T Consensus        82 mEy~~~g~L~~~i~~~~---~~~e~~~~~~~~qi~~al~ylH~~~---iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~  155 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENML  155 (320)
T ss_dssp             EECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EeecCCCcHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCcccceeecCCCceeccccchhhhccc
Confidence            99999999999996543   4788999999999999999999998   99999999999999999999999999987543


Q ss_pred             CCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA  621 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  621 (706)
                      ..  .......||+.|+|||++.+..++.++|||||||++|||++|+.||....   ..........  .....+.    
T Consensus       156 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~---~~~~~~~i~~--~~~~~p~----  224 (320)
T d1xjda_         156 GD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD---EEELFHSIRM--DNPFYPR----  224 (320)
T ss_dssp             TT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHH--CCCCCCT----
T ss_pred             cc--ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCC---HHHHHHHHHc--CCCCCCc----
Confidence            32  22334679999999999999999999999999999999999999985422   2222222111  1111111    


Q ss_pred             cccCcCCHHHHHHHHHHHHHhcCCCCCCCCChh-HHHH
Q 005236          622 CFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMP-SVIL  658 (706)
Q Consensus       622 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~-ev~~  658 (706)
                          ..+    ..+.+|+.+||+.||.+||++. |+++
T Consensus       225 ----~~s----~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         225 ----WLE----KEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             ----TSC----HHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             ----cCC----HHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                111    2466889999999999999996 6754

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.4e-44  Score=382.19  Aligned_cols=249  Identities=25%  Similarity=0.310  Sum_probs=197.1

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccc---hhhHHHHH---HHHHHHhhcCCcceeeeEeEEEeCCee
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKIS---EQGLKELK---NEIILFSKLQHRNLVKLLGCCIHGEEK  458 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~  458 (706)
                      .++|++.++||+|+||.||+|+.. +|+.||||++.+..   ......+.   .|+.+++.++|||||++++++.+.+..
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            368999999999999999999985 58999999985421   12223333   446677778899999999999999999


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ++||||+++|+|.++|...   ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+|+.
T Consensus        83 ~ivmE~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~ylH~~~---iiHrDlKP~NILl~~~g~iKl~DFGla~~  156 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACD  156 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSSSCEEECCCTTCEE
T ss_pred             EEEEEecCCCcHHHHHHhc---ccccHHHHHHHHHHHHHHHHHHHHCC---ccceeeccceeEEcCCCcEEEeeeceeee
Confidence            9999999999999999654   34788999999999999999999998   99999999999999999999999999997


Q ss_pred             cCCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          539 FGGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       539 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      +...    ......||+.|||||++.. ..++.++|||||||+||||++|+.||......+.....    ....... ..
T Consensus       157 ~~~~----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~----~~~~~~~-~~  227 (364)
T d1omwa3         157 FSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID----RMTLTMA-VE  227 (364)
T ss_dssp             CSSS----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH----HHSSSCC-CC
T ss_pred             cCCC----cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HhcccCC-CC
Confidence            6433    2334679999999999975 56899999999999999999999998654433322211    1111111 11


Q ss_pred             cccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHH
Q 005236          618 LIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVIL  658 (706)
Q Consensus       618 ~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~  658 (706)
                      +.     ...+    ..+.+++..||+.||.+|||     ++|+++
T Consensus       228 ~~-----~~~s----~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         228 LP-----DSFS----PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             CC-----SSSC----HHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             CC-----CCCC----HHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            11     1112    24567899999999999999     577764

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-45  Score=380.85  Aligned_cols=251  Identities=21%  Similarity=0.288  Sum_probs=202.9

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .++|++.++||+|+||+||+|+.. +++.||||+++.... ....+.+|+.++++++|||||++++++.+.+..++||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            478999999999999999999985 578899999976443 345688999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCC--CCeEEeeeccccccCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQD--MNPKISDFGLARAFGGD  542 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~--~~~kl~Dfgla~~~~~~  542 (706)
                      +++|+|.++|....  ..+++.++..++.||+.||+|||+++   |+||||||+|||++.+  ..+||+|||+++.....
T Consensus        83 ~~gg~L~~~i~~~~--~~l~e~~~~~i~~qi~~al~yLH~~~---iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~  157 (321)
T d1tkia_          83 ISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHcC---CCcccccccceeecCCCceEEEEcccchhhccccC
Confidence            99999999995432  35899999999999999999999988   9999999999999854  58999999999876432


Q ss_pred             CCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccccccc
Q 005236          543 ETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDAC  622 (706)
Q Consensus       543 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  622 (706)
                      .   ......+|+.|+|||.+.+..++.++||||+||++|||++|+.||.....   .......   ......  +....
T Consensus       158 ~---~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~---~~~~~~i---~~~~~~--~~~~~  226 (321)
T d1tkia_         158 D---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN---QQIIENI---MNAEYT--FDEEA  226 (321)
T ss_dssp             C---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHH---HHTCCC--CCHHH
T ss_pred             C---cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH---HHHHHHH---HhCCCC--CChhh
Confidence            2   23346789999999999999999999999999999999999999854322   1222111   111110  00000


Q ss_pred             ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          623 FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       623 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      + ...+    ..+.+++..||+.||.+|||++|+++
T Consensus       227 ~-~~~s----~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         227 F-KEIS----IEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             H-TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             c-cCCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0 1111    24568899999999999999999987

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-45  Score=376.97  Aligned_cols=257  Identities=27%  Similarity=0.306  Sum_probs=194.4

Q ss_pred             ccceeccCCceeEEEEEeC-CCcEEEEEEcCccchh-----hHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          391 INKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQ-----GLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       391 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      .+++||+|+||+||+|+.. +|+.||||+++.....     ..+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            3579999999999999985 5889999998653221     134688999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +.++++..++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+.......
T Consensus        82 ~~~~~~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~  155 (299)
T d1ua2a_          82 METDLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR  155 (299)
T ss_dssp             CSEEHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred             hcchHHhhhhhc---ccCCCHHHHHHHHHHHHHHHHHhhccc---eecccCCcceEEecCCCccccccCccccccCCCcc
Confidence            999887766532   345888899999999999999999998   99999999999999999999999999987643322


Q ss_pred             cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccccc--
Q 005236          545 EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLIDA--  621 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--  621 (706)
                        .....+||+.|+|||++... .++.++|||||||++|||++|+.||.....   .+......+...........+.  
T Consensus       156 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~---~~~l~~i~~~~~~~~~~~~~~~~~  230 (299)
T d1ua2a_         156 --AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD---LDQLTRIFETLGTPTEEQWPDMCS  230 (299)
T ss_dssp             --CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHHHCCCCTTTSSSTTS
T ss_pred             --cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCH---HHHHHHHHHhcCCCChhhccchhc
Confidence              22335799999999998754 679999999999999999999999754332   2222222222211111000000  


Q ss_pred             -----ccc--CcCCHHH-----HHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          622 -----CFK--DSFNLAE-----VIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       622 -----~~~--~~~~~~~-----~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                           ...  .......     ...+.+|+.+||+.||++|||++|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         231 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence                 000  0011111     135678999999999999999999987

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-45  Score=380.53  Aligned_cols=253  Identities=19%  Similarity=0.226  Sum_probs=195.6

Q ss_pred             ccCCCccc-eeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhc-CCcceeeeEeEEEe----CCee
Q 005236          386 TDNFSINK-KLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKL-QHRNLVKLLGCCIH----GEEK  458 (706)
Q Consensus       386 ~~~~~~~~-~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~  458 (706)
                      .++|.+.. .||+|+||+||+|+. .+++.||||+++.     .+.+.+|+.++.++ +|||||++++++.+    ....
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            36898875 599999999999998 5588999999854     24567899887655 89999999999876    4568


Q ss_pred             EEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC---CCCeEEeeecc
Q 005236          459 LLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ---DMNPKISDFGL  535 (706)
Q Consensus       459 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~---~~~~kl~Dfgl  535 (706)
                      ++|||||+||+|.++|.... ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++   ++.+||+|||+
T Consensus        85 ~ivmEy~~gg~L~~~i~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~~---iiHRDiKp~NIll~~~~~~~~~Kl~DFG~  160 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  160 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSCS-CCCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEECCCCCcHHHHHHhcC-CCCcCHHHHHHHHHHHHHHHHHHHHcC---Cccccccccccccccccccccccccccce
Confidence            99999999999999996532 245899999999999999999999998   999999999999985   56799999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      |+......   ......||+.|||||++.+..++.++|||||||+||||+||+.||...........+   .........
T Consensus       161 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~---~~~i~~~~~  234 (335)
T d2ozaa1         161 AKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM---KTRIRMGQY  234 (335)
T ss_dssp             CEECCCCC---CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------CCCSCSS
T ss_pred             eeeccCCC---ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHH---HHHHhcCCC
Confidence            98764432   223467999999999999999999999999999999999999998643332221111   111100000


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                       .+..+..     ..-...+.+|+.+||+.||.+|||+.|+++.
T Consensus       235 -~~~~~~~-----~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         235 -EFPNPEW-----SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             -SCCTTHH-----HHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -CCCCccc-----ccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence             0000000     0112356789999999999999999999883

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-44  Score=373.49  Aligned_cols=266  Identities=23%  Similarity=0.306  Sum_probs=200.4

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccc--hhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKIS--EQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.++||+|+||+||+|+. .+++.||||+++...  ....+.+.+|+.++++++|||||++++++.++...++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            6899999999999999999998 568999999986532  2345788999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      |+.++.+. ++... ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+......
T Consensus        82 ~~~~~~~~-~~~~~-~~~~l~e~~~~~~~~qil~~L~yLH~~~---IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~  156 (298)
T d1gz8a_          82 FLHQDLKK-FMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  156 (298)
T ss_dssp             CCSEEHHH-HHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             ecCCchhh-hhhhh-cccCCCHHHHHHHHHHHHHHHHHhhcCC---EEccccCchheeecccCcceeccCCcceeccCCc
Confidence            99765444 33222 2355899999999999999999999998   9999999999999999999999999998764332


Q ss_pred             CcccccccccccCccCccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhc---CCCcccc
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNE---GMPSQLI  619 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  619 (706)
                        .......||+.|+|||.+.... ++.++|||||||++|||++|+.||.....   .............   .......
T Consensus       157 --~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~  231 (298)
T d1gz8a_         157 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE---IDQLFRIFRTLGTPDEVVWPGVT  231 (298)
T ss_dssp             --BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGG
T ss_pred             --ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCH---HHHHHHHHHhcCCCchhhccccc
Confidence              2233457999999999987765 57899999999999999999999864322   2222222211111   0000000


Q ss_pred             c------ccc-cCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHHH--hcC
Q 005236          620 D------ACF-KDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVILM--LGS  662 (706)
Q Consensus       620 d------~~~-~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~~--L~~  662 (706)
                      .      ... .......     ....+.+++.+||+.||.+|||++|+++.  +++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~  288 (298)
T d1gz8a_         232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD  288 (298)
T ss_dssp             GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             cccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhcc
Confidence            0      000 0000111     11356788999999999999999999985  554

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.6e-44  Score=368.09  Aligned_cols=261  Identities=23%  Similarity=0.302  Sum_probs=199.7

Q ss_pred             cCCCccceeccCCceeEEEEEeCCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.++||+|+||+||+|++++++.||||++...  .....+.+.+|+.++++++|||||++++++...+..+++|||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            689999999999999999999999999999998653  333457899999999999999999999999999999999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDET  544 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~~  544 (706)
                      +.++.+..+...   ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++........
T Consensus        82 ~~~~~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~  155 (286)
T d1ob3a_          82 LDQDLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR  155 (286)
T ss_dssp             CSEEHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             ehhhhHHHHHhh---cCCcchhhhHHHHHHHHHHHHHhccCc---EEecCCCCceeeEcCCCCEEecccccceecccCcc
Confidence            998877777643   245899999999999999999999988   99999999999999999999999999988643322


Q ss_pred             cccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcccc----
Q 005236          545 EGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQLI----  619 (706)
Q Consensus       545 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  619 (706)
                        ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||.....   .+..................    
T Consensus       156 --~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~  230 (286)
T d1ob3a_         156 --KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE---ADQLMRIFRILGTPNSKNWPNVTE  230 (286)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             --ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCH---HHHHHHHHHhhCCCChhhccchhh
Confidence              22335689999999999765 568999999999999999999999854322   22222222211111000000    


Q ss_pred             -----------cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          620 -----------DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       620 -----------d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                                 ...........-...+.+++.+||+.||++|||++|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                       000000000001124668999999999999999999974

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-43  Score=360.75  Aligned_cols=239  Identities=25%  Similarity=0.392  Sum_probs=192.9

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccch------hhHHHHHHHHHHHhhcC--CcceeeeEeEEEeCCe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISE------QGLKELKNEIILFSKLQ--HRNLVKLLGCCIHGEE  457 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~  457 (706)
                      ++|++.++||+|+||+||+|+.. +++.||||++.+...      .....+.+|+.++++++  |||||++++++.+.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            57999999999999999999984 689999999864211      12234678999999997  8999999999999999


Q ss_pred             eEEEEecCCC-CChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-CCCeEEeeecc
Q 005236          458 KLLIYEFMPN-KSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-DMNPKISDFGL  535 (706)
Q Consensus       458 ~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-~~~~kl~Dfgl  535 (706)
                      .++||||+.+ +++.+++...   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++. ++.+||+|||+
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~---~~l~e~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NIll~~~~~~vkl~DFG~  157 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGS  157 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EEEEEEeccCcchHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccccCcccceEEecCCCeEEECcccc
Confidence            9999999976 5777777543   35899999999999999999999988   999999999999985 47999999999


Q ss_pred             ccccCCCCCcccccccccccCccCccccccCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCC
Q 005236          536 ARAFGGDETEGNTNRVVGTYGYMAPEYASDGQF-SVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGM  614 (706)
Q Consensus       536 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~  614 (706)
                      |+.....    ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...      +.+      .....
T Consensus       158 a~~~~~~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i------~~~~~  221 (273)
T d1xwsa_         158 GALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEI------IRGQV  221 (273)
T ss_dssp             CEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHH------HHCCC
T ss_pred             ceecccc----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHH------hhccc
Confidence            9875322    2234679999999999988776 56789999999999999999998531      111      11111


Q ss_pred             CcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          615 PSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       615 ~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .       +....+    ..+.+++.+||+.||++|||++|+++
T Consensus       222 ~-------~~~~~s----~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         222 F-------FRQRVS----SECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             C-------CSSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C-------CCCCCC----HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            0       011112    24567899999999999999999987

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-43  Score=366.07  Aligned_cols=259  Identities=22%  Similarity=0.295  Sum_probs=194.5

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-C-CcEEEEEEcCcc--chhhHHHHHHHHHHHhhc---CCcceeeeEeEEEe----
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-D-EQEIAVKRLSKI--SEQGLKELKNEIILFSKL---QHRNLVKLLGCCIH----  454 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----  454 (706)
                      .++|++.++||+|+||+||+|++. + ++.||||++...  .......+.+|+.+++.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            478999999999999999999973 3 567999998642  222233456777776665   89999999999864    


Q ss_pred             -CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeee
Q 005236          455 -GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDF  533 (706)
Q Consensus       455 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Df  533 (706)
                       ....+++|||++++++......  ....+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~yLH~~~---ivHrDiKp~NILi~~~~~~kl~df  160 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF  160 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHS--CTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cCceEEEEEEeccCCchhhhhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecCCCccEEEEcCCCCeeecch
Confidence             2467899999999877655432  3355889999999999999999999998   999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          534 GLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       534 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      |+++....   ........||+.|+|||++.+..++.++||||+||++|||++|+.||.....   .+............
T Consensus       161 g~~~~~~~---~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~  234 (305)
T d1blxa_         161 GLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD---VDQLGKILDVIGLP  234 (305)
T ss_dssp             CSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCC
T ss_pred             hhhhhhcc---cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCH---HHHHHHHHHhhCCC
Confidence            99986432   2233456799999999999999999999999999999999999999864332   22222222211110


Q ss_pred             CCcc----------ccc-------ccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          614 MPSQ----------LID-------ACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       614 ~~~~----------~~d-------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      ....          ...       ..+....+    ..+.+|+.+||+.||++|||++|+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         235 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDID----ELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCC----HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             chhcccccccchhhhhccccccchhhccccCC----HHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0000          000       00001111    245678999999999999999999863

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-42  Score=360.68  Aligned_cols=268  Identities=22%  Similarity=0.284  Sum_probs=197.7

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEe--------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIH--------  454 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------  454 (706)
                      .++|++.++||+|+||+||+|++ .+|+.||||++...  .....+.+.+|+.++++++||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            37899999999999999999998 46899999998543  33345678899999999999999999999865        


Q ss_pred             CCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeec
Q 005236          455 GEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFG  534 (706)
Q Consensus       455 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg  534 (706)
                      ....++||||++++.+..+..   ....++...+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~---~~~~~~~~~~~~i~~qil~~l~~lH~~~---ivHrDlKp~NILl~~~~~~kl~dfg  162 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFG  162 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTC---TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCT
T ss_pred             CceEEEEEeccCCCccchhhh---cccccccHHHHHHHHHHHHHHHHhccCC---EEecCcCchheeecCCCcEEeeecc
Confidence            346789999999887765543   2345788899999999999999999988   9999999999999999999999999


Q ss_pred             cccccCCCCCc--ccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhh
Q 005236          535 LARAFGGDETE--GNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWN  611 (706)
Q Consensus       535 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~  611 (706)
                      +++.+......  .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...........+........
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~  242 (318)
T d3blha1         163 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT  242 (318)
T ss_dssp             TCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             eeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence            99876543222  222335799999999998765 689999999999999999999999854332222222222111111


Q ss_pred             cCCCccc--------ccccccCcCCHHH-------HHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          612 EGMPSQL--------IDACFKDSFNLAE-------VIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       612 ~~~~~~~--------~d~~~~~~~~~~~-------~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .......        +...........+       ...+++|+.+||+.||++|||++|+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            1110000        0000111111111       1245679999999999999999999865

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5e-42  Score=354.42  Aligned_cols=260  Identities=19%  Similarity=0.265  Sum_probs=196.2

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceee-eEeEEEeCCeeEEEEec
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVK-LLGCCIHGEEKLLIYEF  464 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~~~~lV~e~  464 (706)
                      ++|++.++||+|+||.||+|++ .+++.||||++.....  .+++..|++++++++|+|++. +..++.+++..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            5799999999999999999998 4588999998765322  246788999999998776554 55666778889999999


Q ss_pred             CCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEc---CCCCeEEeeeccccccCC
Q 005236          465 MPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLD---QDMNPKISDFGLARAFGG  541 (706)
Q Consensus       465 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~---~~~~~kl~Dfgla~~~~~  541 (706)
                      +. ++|...+...  ...+++..+..++.|++.||+|||+++   |+||||||+|||++   .+..+||+|||+|+.+..
T Consensus        85 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~  158 (299)
T d1ckia_          85 LG-PSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  158 (299)
T ss_dssp             CC-CBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred             cC-Cchhhhhhhc--cCCCcHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence            94 5565555332  245899999999999999999999998   99999999999986   455799999999998754


Q ss_pred             CCCc-----ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          542 DETE-----GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       542 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      ....     .......||+.|||||.+.+..++.++|||||||++|||++|+.||...........+.............
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (299)
T d1ckia_         159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE  238 (299)
T ss_dssp             TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHH
T ss_pred             cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChh
Confidence            3221     12334679999999999999999999999999999999999999987655544433332222211111111


Q ss_pred             ccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          617 QLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       617 ~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      .+.+     ..+    ..+.+++..||+.+|++||+++++.+.|+..
T Consensus       239 ~~~~-----~~p----~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         239 VLCK-----GYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHTT-----TSC----HHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             Hhcc-----CCC----HHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            1111     111    2456788899999999999999999888754

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.1e-41  Score=350.15  Aligned_cols=261  Identities=15%  Similarity=0.216  Sum_probs=206.2

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCC-cceeeeEeEEEeCCeeEEEEe
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQH-RNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e  463 (706)
                      .++|++.++||+|+||+||+|++. +++.||||++.....  ...+.+|++.++.++| +|++.+++++.++...++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            368999999999999999999975 588999998754322  2457788999999975 899999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcC-----CCCeEEeeeccccc
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQ-----DMNPKISDFGLARA  538 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~-----~~~~kl~Dfgla~~  538 (706)
                      |+ +++|.+++....  ..+++..+..++.|++.||+|||+.+   |+||||||+|||++.     ++.+||+|||+|+.
T Consensus        82 ~~-~~~l~~~~~~~~--~~~~~~~~~~i~~q~~~~l~~lH~~g---iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          82 LL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             CC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHhhc--cchhhHHHHHHHHHHHHHHHHHHHCC---ceeccCCccceeecCcccccCCceEEcccceeEE
Confidence            99 689999885433  45889999999999999999999988   999999999999974     57899999999998


Q ss_pred             cCCCCCc-----ccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcC
Q 005236          539 FGGDETE-----GNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEG  613 (706)
Q Consensus       539 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~  613 (706)
                      +......     .......||+.|||||.+.+..++.++|||||||++|||++|+.||......................
T Consensus       156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~  235 (293)
T d1csna_         156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  235 (293)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC
Confidence            6533221     12334679999999999999999999999999999999999999997655544433333222221111


Q ss_pred             CCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHHhcCC
Q 005236          614 MPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILMLGSE  663 (706)
Q Consensus       614 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~L~~~  663 (706)
                      ...++..     ..+    ..+.+++..|++.+|.+||+++.+.+.|+..
T Consensus       236 ~~~~l~~-----~~p----~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         236 PLRELCA-----GFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             CHHHHTT-----TSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             ChHHhcC-----CCC----HHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            2222211     111    2356688899999999999999998888754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-42  Score=362.67  Aligned_cols=261  Identities=23%  Similarity=0.260  Sum_probs=192.6

Q ss_pred             CCCccceeccCCceeEEEEEeC-CCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC------CeeEE
Q 005236          388 NFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG------EEKLL  460 (706)
Q Consensus       388 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~l  460 (706)
                      +|+..++||+|+||+||+|++. +++.||||++.....    .+.+|+.++++++||||+++++++...      ...++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            5888899999999999999985 589999999865332    234799999999999999999998643      24689


Q ss_pred             EEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-CeEEeeecccccc
Q 005236          461 IYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAF  539 (706)
Q Consensus       461 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfgla~~~  539 (706)
                      ||||++++.+..+.........+++..+..++.||+.||+|||+++   |+||||||+|||++.++ .+||+|||+++.+
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~---IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCcceEEEecCCCceeEecccchhhc
Confidence            9999987755554443344456899999999999999999999988   99999999999999775 8999999999876


Q ss_pred             CCCCCcccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHH--------HHHh
Q 005236          540 GGDETEGNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHA--------WKLW  610 (706)
Q Consensus       540 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~--------~~~~  610 (706)
                      .....   .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+....+...        +...
T Consensus       174 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~  250 (350)
T d1q5ka_         174 VRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM  250 (350)
T ss_dssp             CTTSC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             cCCcc---cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhh
Confidence            43322   223579999999998875 57899999999999999999999998643322211111110        0000


Q ss_pred             h----cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          611 N----EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       611 ~----~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      .    ...........+...........+.+|+.+||+.||++|||++|+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             CC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0    00011100000000001111224667899999999999999999986

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-42  Score=355.21  Aligned_cols=252  Identities=23%  Similarity=0.298  Sum_probs=201.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC----CCcEEEEEEcCcc----chhhHHHHHHHHHHHhhcCC-cceeeeEeEEEeCCe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA----DEQEIAVKRLSKI----SEQGLKELKNEIILFSKLQH-RNLVKLLGCCIHGEE  457 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~  457 (706)
                      ++|++.++||+|+||+||+|+..    .|+.||||++.+.    .....+.+.+|+.++++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            67999999999999999999862    3789999998652    22345678899999999976 899999999999999


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+.+|+|.+++....   .+....+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~---~~~e~~~~~~~~Qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~vkL~DFG~a~  177 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK  177 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             eeeeeecccccHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHhhcCC---EEeccCCccceeecCCCCEEEeeccchh
Confidence            999999999999999996543   3677888999999999999999988   9999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccccCccCccccccC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDG--QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMP  615 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~  615 (706)
                      .+..... .......|++.|+|||.+.+.  .++.++|||||||+||||++|+.||......+....+...........+
T Consensus       178 ~~~~~~~-~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~  256 (322)
T d1vzoa_         178 EFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP  256 (322)
T ss_dssp             ECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCC
T ss_pred             hhccccc-ccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCc
Confidence            7643322 223346799999999999765  4788999999999999999999998765555444443332221111111


Q ss_pred             cccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCC-----hhHHHH
Q 005236          616 SQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPC-----MPSVIL  658 (706)
Q Consensus       616 ~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt-----~~ev~~  658 (706)
                      ..         .    ...+.+++.+||+.||.+|||     ++|+++
T Consensus       257 ~~---------~----s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         257 QE---------M----SALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             TT---------S----CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             cc---------C----CHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            11         1    124667889999999999995     788875

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-41  Score=356.45  Aligned_cols=264  Identities=22%  Similarity=0.310  Sum_probs=196.3

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc-chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC----eeE
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI-SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE----EKL  459 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~  459 (706)
                      .++|++.++||+|+||+||+|+. .+++.||||++... .....+.+.+|+.++++++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            46799999999999999999987 46899999999753 3445678899999999999999999999987653    345


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccccc
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF  539 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~  539 (706)
                      ++++|+.+|+|.+++...    .+++..+..++.||+.||+|||+++   |+||||||+||||++++.+||+|||+++..
T Consensus        87 ~l~~~~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~yLH~~~---iiHRDIKp~NILl~~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA  159 (345)
T ss_dssp             EEEEECCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEeecCCchhhhhhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCcceEEECCCCCEEEcccCceeec
Confidence            666778899999999543    4899999999999999999999998   999999999999999999999999999876


Q ss_pred             CCCCCc-ccccccccccCccCcccccc-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCcc
Q 005236          540 GGDETE-GNTNRVVGTYGYMAPEYASD-GQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQ  617 (706)
Q Consensus       540 ~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  617 (706)
                      ...... .......||+.|+|||++.. ..++.++||||+||++|||++|+.||......   .................
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~  236 (345)
T d1pmea_         160 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL---DQLNHILGILGSPSQED  236 (345)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCSCCHHH
T ss_pred             cCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHH---HHHHHHhhhccCCChhh
Confidence            433222 22345679999999999854 56789999999999999999999998543221   11111111111100000


Q ss_pred             c-----------cccc-ccCcCCHHH-----HHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          618 L-----------IDAC-FKDSFNLAE-----VIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       618 ~-----------~d~~-~~~~~~~~~-----~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                      .           .... .........     ..++.+++.+||+.||.+|||++|+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0           0000 000001110     1246789999999999999999999874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-41  Score=357.45  Aligned_cols=260  Identities=23%  Similarity=0.315  Sum_probs=193.7

Q ss_pred             ccCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCC------
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGE------  456 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  456 (706)
                      .++|++.++||+|+||+||+|++. +|+.||||+++.  ......+.+.+|+.++++++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            368999999999999999999984 589999999975  34455678899999999999999999999998654      


Q ss_pred             eeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccc
Q 005236          457 EKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLA  536 (706)
Q Consensus       457 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla  536 (706)
                      ..++||||+ +.+|..++..    ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~~---IiHrDiKp~NIL~~~~~~~kl~Dfg~a  168 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  168 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecc-cccHHHHHHh----ccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCcchhhcccccccccccccce
Confidence            469999999 5677776643    34899999999999999999999998   999999999999999999999999999


Q ss_pred             cccCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHH-----h
Q 005236          537 RAFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL-----W  610 (706)
Q Consensus       537 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-----~  610 (706)
                      +.....     .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..................     +
T Consensus       169 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
T d1cm8a_         169 RQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV  243 (346)
T ss_dssp             EECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             eccCCc-----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHH
Confidence            875332     2346789999999998764 5789999999999999999999998543221111111110000     0


Q ss_pred             h--------------cCCCcccccccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH--hcCC
Q 005236          611 N--------------EGMPSQLIDACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM--LGSE  663 (706)
Q Consensus       611 ~--------------~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~--L~~~  663 (706)
                      .              ...........+ ...+    ..+.+|+.+||+.||.+|||++|+++.  ++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s----~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         244 QRLQSDEAKNYMKGLPELEKKDFASIL-TNAS----PLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             HTCSCHHHHHHHHHSCCCCCCCGGGTC-TTCC----HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             hhhcchhhhhhhccCCcccccchHHhc-cCCC----HHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence            0              000000000000 1111    245678999999999999999999985  6554

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-41  Score=345.75  Aligned_cols=262  Identities=23%  Similarity=0.292  Sum_probs=202.5

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeCCeeEEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e  463 (706)
                      ++|++.++||+|+||+||+|++ .+++.||||+++.  ......+.+.+|+.+++.++||||+++++++.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5899999999999999999998 4688899999854  334456889999999999999999999999999999999999


Q ss_pred             cCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeeccccccCCCC
Q 005236          464 FMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDE  543 (706)
Q Consensus       464 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~~~~~~  543 (706)
                      ++.+++|..++...   ..+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||.++......
T Consensus        82 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~q~~~aL~~lH~~~---IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~  155 (292)
T d1unla_          82 FCDQDLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             CCSEEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSCC
T ss_pred             eccccccccccccc---cccchhHHHHHHHHHHHHHHHhhcCC---EeeecccCcccccccCCceeeeecchhhcccCCC
Confidence            99999998887543   45788999999999999999999988   9999999999999999999999999998864332


Q ss_pred             CcccccccccccCccCccccccCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCccc----
Q 005236          544 TEGNTNRVVGTYGYMAPEYASDGQ-FSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPSQL----  618 (706)
Q Consensus       544 ~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  618 (706)
                      .  ......+++.|+|||.+.... ++.++||||+||++|||++|+.||..  ..+..+.................    
T Consensus       156 ~--~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (292)
T d1unla_         156 R--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP--GNDVDDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             S--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC--CSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             c--cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCC--CCCHHHHHHHHHhhcCCCChhhhhhhh
Confidence            2  222345788999999987665 68999999999999999999999632  22223333332222211110000    


Q ss_pred             --cc--------cccc-CcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          619 --ID--------ACFK-DSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       619 --~d--------~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                        .+        .... ..........+.+|+.+||+.||.+|||++||++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              00        0000 0000011124567899999999999999999976

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=9.8e-41  Score=349.38  Aligned_cols=255  Identities=19%  Similarity=0.306  Sum_probs=194.3

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeC--CeeEEEE
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHG--EEKLLIY  462 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lV~  462 (706)
                      ++|++.++||+|+||+||+|+. .+++.||||+++...   .+.+.+|+.++++++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            6899999999999999999998 458899999986543   457889999999995 99999999999854  4689999


Q ss_pred             ecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCC-CeEEeeeccccccCC
Q 005236          463 EFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDM-NPKISDFGLARAFGG  541 (706)
Q Consensus       463 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~-~~kl~Dfgla~~~~~  541 (706)
                      ||+++++|..+.      +.+++..+..++.||+.||+|||+++   |+||||||+||||+.++ .+||+|||+|+.+..
T Consensus       112 e~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~~g---IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~  182 (328)
T d3bqca1         112 EHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  182 (328)
T ss_dssp             ECCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred             eecCCCcHHHHh------cCCCHHHHHHHHHHHHHHHHHHhhcc---cccccccccceEEcCCCCeeeecccccceeccC
Confidence            999999998764      34889999999999999999999998   99999999999998765 599999999987643


Q ss_pred             CCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHH-----------
Q 005236          542 DETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKL-----------  609 (706)
Q Consensus       542 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~-----------  609 (706)
                      ..   ......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||.......  .........           
T Consensus       183 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~--~~~~~i~~~~g~~~~~~~~~  257 (328)
T d3bqca1         183 GQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY--DQLVRIAKVLGTEDLYDYID  257 (328)
T ss_dssp             TC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH--HHHHHHHHHHCHHHHHHHHH
T ss_pred             CC---cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhH--HHHHHHHHHHCCchhhhhhh
Confidence            32   23345789999999998765 57999999999999999999999976433211  111111000           


Q ss_pred             -hhcCCCcccc-----------cccccCcCCHHHHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          610 -WNEGMPSQLI-----------DACFKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       610 -~~~~~~~~~~-----------d~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                       ..........           ...............+.+|+.+||+.||.+|||++|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         258 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             HTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             0000000000           000000000001124678999999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-40  Score=352.66  Aligned_cols=261  Identities=23%  Similarity=0.267  Sum_probs=189.1

Q ss_pred             cCCCccceeccCCceeEEEEEeC-CCcEEEEEEcCc--cchhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC------Ce
Q 005236          387 DNFSINKKLGEGGFGPVYKGTLA-DEQEIAVKRLSK--ISEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG------EE  457 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~  457 (706)
                      ++|++.++||+|+||+||+|++. +|+.||||++..  ......+.+.+|+.++++++|||||++++++...      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            68999999999999999999985 589999999864  3445566789999999999999999999999643      57


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .++||||+.++.+..+.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+|++|||+++
T Consensus        97 ~~iv~Ey~~~~l~~~~~------~~~~~~~i~~~~~qil~gl~~LH~~g---iiHrDlKP~Nil~~~~~~~kl~df~~~~  167 (355)
T d2b1pa1          97 VYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_dssp             EEEEEECCSEEHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             eEEEEeccchHHHHhhh------cCCCHHHHHHHHHHHHHHHHHhhhcc---cccccCCccccccccccceeeechhhhh
Confidence            89999999776555432      34789999999999999999999998   9999999999999999999999999988


Q ss_pred             ccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHH----------
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAW----------  607 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~----------  607 (706)
                      .....   .......+|+.|+|||++.+..++.++||||+||++|||++|+.||...+.......+....          
T Consensus       168 ~~~~~---~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~  244 (355)
T d2b1pa1         168 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK  244 (355)
T ss_dssp             ----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred             ccccc---cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHH
Confidence            75332   22334578999999999999999999999999999999999999985432211111111000          


Q ss_pred             ------HHhhcCC-C-----cccccccccCcC---CHHHHHHHHHHHHHhcCCCCCCCCChhHHHHH
Q 005236          608 ------KLWNEGM-P-----SQLIDACFKDSF---NLAEVIRCIHIGLLCVQQYPEDRPCMPSVILM  659 (706)
Q Consensus       608 ------~~~~~~~-~-----~~~~d~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~RPt~~ev~~~  659 (706)
                            ....... .     ............   .......+.+|+.+||+.||++|||++||++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             SCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                  0000000 0     001111111111   11223457789999999999999999999854

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-40  Score=352.07  Aligned_cols=257  Identities=24%  Similarity=0.331  Sum_probs=193.6

Q ss_pred             ccCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCcc--chhhHHHHHHHHHHHhhcCCcceeeeEeEEEeC-----Ce
Q 005236          386 TDNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKI--SEQGLKELKNEIILFSKLQHRNLVKLLGCCIHG-----EE  457 (706)
Q Consensus       386 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  457 (706)
                      .++|++.++||+|+||+||+|+. .+|+.||||++...  .....+.+.+|+.++++++|||||++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            46899999999999999999997 46899999999753  344567889999999999999999999998643     34


Q ss_pred             eEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEEeeecccc
Q 005236          458 KLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLAR  537 (706)
Q Consensus       458 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~  537 (706)
                      .+++|+|+.+|+|.+++..    ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+|++|||++.
T Consensus        97 ~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~~g---iiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             eEEEEEeecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCCccccccccccccccccchhc
Confidence            5777888899999999853    34899999999999999999999998   9999999999999999999999999997


Q ss_pred             ccCCCCCcccccccccccCccCccccccC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHhhcCCCc
Q 005236          538 AFGGDETEGNTNRVVGTYGYMAPEYASDG-QFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNLIRHAWKLWNEGMPS  616 (706)
Q Consensus       538 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  616 (706)
                      ...     .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...+.......+   ...... ...
T Consensus       170 ~~~-----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i---~~~~~~-~~~  240 (348)
T d2gfsa1         170 HTD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI---LRLVGT-PGA  240 (348)
T ss_dssp             CCT-----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHHHCC-CCH
T ss_pred             ccC-----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHH---HHhcCC-CCh
Confidence            642     223346789999999987765 4689999999999999999999998543222111111   111100 000


Q ss_pred             cccc------------ccc-cCcCCHH-----HHHHHHHHHHHhcCCCCCCCCChhHHHH
Q 005236          617 QLID------------ACF-KDSFNLA-----EVIRCIHIGLLCVQQYPEDRPCMPSVIL  658 (706)
Q Consensus       617 ~~~d------------~~~-~~~~~~~-----~~~~~~~l~~~cl~~~p~~RPt~~ev~~  658 (706)
                      +...            ... .......     ....+.+|+.+||+.||.+|||++|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         241 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            0000            000 0000010     0124568999999999999999999987

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.1e-36  Score=317.47  Aligned_cols=264  Identities=20%  Similarity=0.213  Sum_probs=192.0

Q ss_pred             cCCCccceeccCCceeEEEEEe-CCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-----------CcceeeeEeEEEe
Q 005236          387 DNFSINKKLGEGGFGPVYKGTL-ADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-----------HRNLVKLLGCCIH  454 (706)
Q Consensus       387 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~  454 (706)
                      ++|++.++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+.++++++           |+||+++++++..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            3599999999999999999998 468999999997543 33467788998888875           5789999988865


Q ss_pred             C--CeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecccCCCcEEEcCCCC----
Q 005236          455 G--EEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQ-DSRLRIIHRDLKASNVLLDQDMN----  527 (706)
Q Consensus       455 ~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~----  527 (706)
                      .  ...+++|+++..+..............+++..+..++.||+.||+|||+ .+   |+||||||+||||+.++.    
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~---IvHrDlKp~NIll~~~~~~~~~  168 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENL  168 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTE
T ss_pred             ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC---cccccCChhHeeeeccCccccc
Confidence            3  4567777777666554444444455668889999999999999999998 65   999999999999987654    


Q ss_pred             --eEEeeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCchhH---
Q 005236          528 --PKISDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLLEIVSGKKNRGFYHSDNKLNL---  602 (706)
Q Consensus       528 --~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~elltG~~p~~~~~~~~~~~~---  602 (706)
                        ++|+|||.+.....     ......||+.|+|||++....++.++||||+||+++||++|+.||...........   
T Consensus       169 ~~~kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~  243 (362)
T d1q8ya_         169 IQIKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH  243 (362)
T ss_dssp             EEEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred             ceeeEeeccccccccc-----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHH
Confidence              99999999986432     22346799999999999999999999999999999999999999865433221111   


Q ss_pred             HHHHHHHhhc------------------C-CCccccc-------cc--ccCcCCHHHHHHHHHHHHHhcCCCCCCCCChh
Q 005236          603 IRHAWKLWNE------------------G-MPSQLID-------AC--FKDSFNLAEVIRCIHIGLLCVQQYPEDRPCMP  654 (706)
Q Consensus       603 ~~~~~~~~~~------------------~-~~~~~~d-------~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~RPt~~  654 (706)
                      ..........                  . ....+..       ..  ............+.+|+.+||+.||.+|||++
T Consensus       244 ~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~  323 (362)
T d1q8ya_         244 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG  323 (362)
T ss_dssp             HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHH
Confidence            1111111100                  0 0000000       00  01122334556788999999999999999999


Q ss_pred             HHHHH
Q 005236          655 SVILM  659 (706)
Q Consensus       655 ev~~~  659 (706)
                      |+++.
T Consensus       324 e~L~H  328 (362)
T d1q8ya_         324 GLVNH  328 (362)
T ss_dssp             HHHTC
T ss_pred             HHhcC
Confidence            99874

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.88  E-value=5.9e-23  Score=195.75  Aligned_cols=171  Identities=20%  Similarity=0.176  Sum_probs=122.1

Q ss_pred             CCccceeccCCceeEEEEEeCCCcEEEEEEcCccc------------------hhhHHHHHHHHHHHhhcCCcceeeeEe
Q 005236          389 FSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKIS------------------EQGLKELKNEIILFSKLQHRNLVKLLG  450 (706)
Q Consensus       389 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------------------~~~~~~~~~E~~~l~~l~h~niv~l~~  450 (706)
                      +.+.++||+|+||.||+|++.+|+.||||+++...                  ......+..|...+.++.|++++..++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            35679999999999999999899999999864210                  011234567888999999999998876


Q ss_pred             EEEeCCeeEEEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecccCCCcEEEcCCCCeEE
Q 005236          451 CCIHGEEKLLIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDSRLRIIHRDLKASNVLLDQDMNPKI  530 (706)
Q Consensus       451 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dikp~Nill~~~~~~kl  530 (706)
                      +.    ..+++|||+++..+.+          ++......++.|++++|+|||+.+   |+||||||+|||+++++ ++|
T Consensus        82 ~~----~~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~~g---iiHrDiKP~NILv~~~~-~~l  143 (191)
T d1zara2          82 WE----GNAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVSEEG-IWI  143 (191)
T ss_dssp             EE----TTEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEETTE-EEE
T ss_pred             ec----CCEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhhCC---EEEccCChhheeeeCCC-EEE
Confidence            52    2479999998866543          334445679999999999999988   99999999999999655 899


Q ss_pred             eeeccccccCCCCCcccccccccccCccCccccccCCCCcchhhHHHHHHHH
Q 005236          531 SDFGLARAFGGDETEGNTNRVVGTYGYMAPEYASDGQFSVKSDVFSFGILLL  582 (706)
Q Consensus       531 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDv~SlGvil~  582 (706)
                      +|||+|..............   ....+ .|. ....|+.++|+||..--+.
T Consensus       144 iDFG~a~~~~~~~~~~~l~r---d~~~~-~~~-f~r~y~~~~d~~s~~~~~~  190 (191)
T d1zara2         144 IDFPQSVEVGEEGWREILER---DVRNI-ITY-FSRTYRTEKDINSAIDRIL  190 (191)
T ss_dssp             CCCTTCEETTSTTHHHHHHH---HHHHH-HHH-HHHHHCCCCCHHHHHHHHH
T ss_pred             EECCCcccCCCCCcHHHHHH---HHHHH-HHH-HcCCCCCcccHHHHHHHHh
Confidence            99999976532111100000   00000 111 1356788999999865443

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.62  E-value=3e-08  Score=84.04  Aligned_cols=110  Identities=15%  Similarity=0.138  Sum_probs=67.1

Q ss_pred             EEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEe
Q 005236            8 FVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMW   87 (706)
Q Consensus         8 ~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~   87 (706)
                      .+.++||+||.+.          +|+|.|++||.++|.|                     ..|.|+|.|+.+|+.  .++
T Consensus         4 v~~~~~n~il~~~----------~~~~~~~~~l~~~q~l---------------------~~g~y~L~~q~DGNL--vL~   50 (120)
T d1dlpa2           4 VVANNGNSILYST----------QGNDNHPQTLHATQSL---------------------QLSPYRLSMETDCNL--VLF   50 (120)
T ss_dssp             CCSSCCCEECCCC------------CCCCCCEECSSCCC---------------------BCSSCEEEEETTTEE--EEE
T ss_pred             EEEeCCCeEEEcC----------CCCCCcccEEcCCCee---------------------EcCCEEEEEcCCCcE--EEe
Confidence            4556666666532          6789999999999999                     578899999999974  667


Q ss_pred             eCCceeeeeCCCCCCccccccccccCcceeEEeecCCeeEEEEEccCCceEEEEEEecccceEEEE
Q 005236           88 KGSRKFYRSGPWNGLRFSAATLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRF  153 (706)
Q Consensus        88 ~~~~~yw~sg~w~g~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~  153 (706)
                      ....++|.++.-........-+.....  +.+.+...+..+...........+++|+.|| +++.|
T Consensus        51 ~~~~~vW~s~t~~~~~~~~~~l~~~Gn--Lvl~d~~~~~lW~S~t~~~~~~~~l~Lq~DG-nlvlY  113 (120)
T d1dlpa2          51 DRDDRVWSTNTAGKGTGCRAVLQPNGR--MDVLTNQNIAVWTSGNSRSAGRYVFVLQPDR-NLAIY  113 (120)
T ss_dssp             BTTBCCSCCCCCSSCSSCEEEEETTTE--EEEEETTTEEEEECCCCCSSSCCEEEECSSS-CEEEE
T ss_pred             cCCcEEEEEccccCCCcEEEEEeCCee--EEEEcCCCCEEEEeCCCCCCCcEEEEECCCC-cEEEe
Confidence            778899987642211111111222221  2222344444444333333334579999999 88876

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.61  E-value=8.9e-08  Score=93.86  Aligned_cols=149  Identities=16%  Similarity=0.096  Sum_probs=103.6

Q ss_pred             HHHHhccCCCccceeccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcC-CcceeeeEeEEEeCCeeE
Q 005236          381 TIANATDNFSINKKLGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQ-HRNLVKLLGCCIHGEEKL  459 (706)
Q Consensus       381 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  459 (706)
                      ++....+.|++.+..+.++-+.||+... +++.++||+...........+.+|...+..+. +--+.+++.+..+++..+
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            3444556777766655555578998865 56678889876654444556778888887774 434677888888888999


Q ss_pred             EEEecCCCCChhhhhhcccccCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 005236          460 LIYEFMPNKSLDSFIFDQERCKLLDWSKRFHIICGTARGLLYLHQDS---------------------------------  506 (706)
Q Consensus       460 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------  506 (706)
                      +||+++++.++.+.....        .....++.++++.++.||+..                                 
T Consensus        87 lv~~~l~G~~~~~~~~~~--------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T d1j7la_          87 LLMSEADGVLCSEEYEDE--------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             EEEECCSSEEHHHHTTTC--------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGG
T ss_pred             EEEEeccccccccccccc--------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcc
Confidence            999999998886544211        112334555666666666321                                 


Q ss_pred             -----------------------CCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          507 -----------------------RLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       507 -----------------------~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                                             ...++|+|+.|.|||+++++.+-|+||+.+..
T Consensus       159 ~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             STTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                   12489999999999999877778999998764

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=98.32  E-value=1.8e-06  Score=72.12  Aligned_cols=111  Identities=11%  Similarity=0.162  Sum_probs=68.1

Q ss_pred             cccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCCCCCccccccccccCcce
Q 005236           37 SDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFN  116 (706)
Q Consensus        37 tDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w~g~~~s~~~~~~~~~~~  116 (706)
                      ||||+|||.|..+      ..|+         .|+|+|.|+.+|+  ++++....++|.++..+...-....+.....+ 
T Consensus         1 tDtL~~gq~L~~g------~~l~---------~g~~~l~~q~DGN--Lvly~~~~~vW~s~~~~~~~~~~l~l~~dGnL-   62 (112)
T d1xd5a_           1 SDRLNSGHQLDTG------GSLA---------EGGYLFIIQNDCN--LVLYDNNRAVWASGTNGKASGCVLKMQNDGNL-   62 (112)
T ss_dssp             CCEEETTEEECTT------CEEE---------ETTEEEEECTTSC--EEEEETTEEEEECCCTTSCSSEEEEECTTSCE-
T ss_pred             CCEecCCCEecCC------CEEE---------ECCEEEEEcCCCC--EEEEcCCcEEEEccCccCCCCcEEEEeccccE-
Confidence            7999999999433      3364         3999999999998  56677888999887643221111112222211 


Q ss_pred             eEEeecCCeeEEEEEccCCceEEEEEEecccceEEEEEEeccCcceEEEEeccCCCC
Q 005236          117 FSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRFTWKKATQNWELQLNVPRDLC  173 (706)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~w~~~~~~W~~~~~~p~~~C  173 (706)
                       .. .+.....+...........+++|..+| ++..|.     ......|+...+.|
T Consensus        63 -vl-~~~~~~~w~s~t~~~~~~~~l~L~ddG-Nlvly~-----~~~~~~W~S~t~~~  111 (112)
T d1xd5a_          63 -VI-YSGSRAIWASNTNRQNGNYYLILQRDR-NVVIYD-----NSNNAIWATHTNVG  111 (112)
T ss_dssp             -EE-EETTEEEEECCCCCSCCCCEEEECTTS-CEEEEC-----TTSCEEEECCCCCC
T ss_pred             -EE-EecCCeEEEEeeccCCCceEEEEcCCC-CEEEEC-----CCCcEEecCCCccC
Confidence             11 122333333333334445689999999 877662     23456788777655

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.26  E-value=6.9e-07  Score=75.39  Aligned_cols=53  Identities=11%  Similarity=0.256  Sum_probs=35.4

Q ss_pred             ceEEEEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcc
Q 005236            4 LSFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPE   83 (706)
Q Consensus         4 ~~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~   83 (706)
                      .+.|+|+++|||||++.++    +++||||                               ++.++|.|.+.|+++|+..
T Consensus        67 ~~~~~l~~~GnLvl~d~~~----~~lW~S~-------------------------------t~~~~~~~~l~Lq~DGnlv  111 (120)
T d1dlpa2          67 GCRAVLQPNGRMDVLTNQN----IAVWTSG-------------------------------NSRSAGRYVFVLQPDRNLA  111 (120)
T ss_dssp             SCEEEEETTTEEEEEETTT----EEEEECC-------------------------------CCCSSSCCEEEECSSSCEE
T ss_pred             cEEEEEeCCeeEEEEcCCC----CEEEEeC-------------------------------CCCCCCcEEEEECCCCcEE
Confidence            3456666777777766543    5667765                               3457889999999999865


Q ss_pred             eEEeeCCceeee
Q 005236           84 LIMWKGSRKFYR   95 (706)
Q Consensus        84 ~~~~~~~~~yw~   95 (706)
                      ++    +.++|.
T Consensus       112 lY----~~~~W~  119 (120)
T d1dlpa2         112 IY----GGALWT  119 (120)
T ss_dssp             EE----CCCCCB
T ss_pred             Ee----CCCccc
Confidence            44    335664

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.05  E-value=8.3e-06  Score=68.34  Aligned_cols=104  Identities=13%  Similarity=0.104  Sum_probs=66.8

Q ss_pred             EEEeecCCCcccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCCCCCccccc
Q 005236           28 YLWQSFDYPSDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAA  107 (706)
Q Consensus        28 ~~WqSFd~PtDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w~g~~~s~~  107 (706)
                      +-||++|.|.+||-++|.|..+          +       +.|+|+|.|+.+|+  ++++++..++|.++......-...
T Consensus         5 ~s~~~~~~~~~~l~~~q~l~~~----------~-------~~~~y~l~mQ~DGN--LVLy~~~~~vWssnt~~~~~~~~l   65 (119)
T d1b2pa_           5 FSKQPDDNHPQILHATESLEIL----------F-------GTHVYRFIMQTDCN--LVLYDNNNPIWATNTGGLGNGCRA   65 (119)
T ss_dssp             ECSCSSSCCCCEEETTCEEEEE----------E-------TTEEEEEEECTTSC--EEEEETTEEEEECCCTTSCSSCEE
T ss_pred             EeeecCCCCCCEEeCCCeEEEe----------c-------CCceEEEEECCCCc--EEEEECCeEEEEecCCCCCcceEE
Confidence            3489999999999999998422          1       58999999999998  456788889999876422111111


Q ss_pred             cccccCcceeEEeecCCeeEEEEEccCCceEEEEEEecccceEEEE
Q 005236          108 TLRQNPVFNFSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRF  153 (706)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~  153 (706)
                      .+.....  +.+.+..................+++|..|| ++..|
T Consensus        66 ~l~~dGn--LvL~d~~g~~vWsS~t~~~~~~~~l~Lq~DG-NlvlY  108 (119)
T d1b2pa_          66 VLQPDGV--LVVITNENVTVWQSPVAGKAGHYVLVLQPDR-NVVIY  108 (119)
T ss_dssp             EECTTSC--EEEECTTCCEEEECSCCCCSSCEEEEECTTS-CEEEE
T ss_pred             EEEeCCC--EEEECCCCcEEEECCCcCCCCceEEEEcCCC-CEEEE
Confidence            1222221  2223333444444333333345579999999 87776

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.05  E-value=6.3e-06  Score=79.72  Aligned_cols=131  Identities=18%  Similarity=0.136  Sum_probs=86.9

Q ss_pred             eeccCCc-eeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCC--cceeeeEeEEEeCCeeEEEEecCCCCCh
Q 005236          394 KLGEGGF-GPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQH--RNLVKLLGCCIHGEEKLLIYEFMPNKSL  470 (706)
Q Consensus       394 ~lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~~gsL  470 (706)
                      .+..|.. +.||+....++..+++|.......   ..+..|...++.+..  -.+.+++.+..+.+..++||++++|.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            4455553 678999988888899998654332   346777777776643  3356778888888889999999998776


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHHHHHHH-----------------------------------------------
Q 005236          471 DSFIFDQERCKLLDWSKRFHIICGTARGLLYLH-----------------------------------------------  503 (706)
Q Consensus       471 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-----------------------------------------------  503 (706)
                      .+...        ..   ..++.++++.|.-||                                               
T Consensus        94 ~~~~~--------~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (255)
T d1nd4a_          94 LSSHL--------AP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF  162 (255)
T ss_dssp             TTSCC--------CH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred             ccccc--------cH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHH
Confidence            44210        00   011122222222222                                               


Q ss_pred             ----hC----CCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          504 ----QD----SRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       504 ----~~----~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                          ..    .+..++|+|+.|.|||++++..+-|+||+.+..
T Consensus       163 ~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         163 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence                21    123489999999999999887788999998754

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=97.90  E-value=1.6e-05  Score=66.05  Aligned_cols=81  Identities=19%  Similarity=0.204  Sum_probs=54.9

Q ss_pred             eEEEEecCCcEEEEecCCCCCceEEEeecCCCc-cccc---CCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCC
Q 005236            5 SFLFVCYSGNLVLRGERDGGSETYLWQSFDYPS-DTLL---PGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQD   80 (706)
Q Consensus         5 ~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~Pt-DtlL---pgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g   80 (706)
                      ..+.|.++|||||++..     .++|+|..+-. .+-+   +.=.|-.-  ...+  -+-|.+.++.++|.|.+.|+++|
T Consensus        28 ~~l~~q~DGNLvL~~~~-----~~vW~s~t~~~~~~~l~l~~dGNLvl~--d~~~--~~vWsS~t~~~~g~y~l~Lq~DG   98 (115)
T d1dlpa1          28 FRFTMQSDCNLVLFDSD-----VRVWASNTAGATGCRAVLQSDGLLVIL--TAQN--TIRWSSGTKGSIGNYVLVLQPDR   98 (115)
T ss_dssp             EEEEECTTSCEEEEESS-----SEEECCCCCSCSCCBCCBCSSSCBCCB--CTTT--CCSCCCCCCCCSSCCEEEECSSS
T ss_pred             EEEEECCCCeEEEEcCC-----eeEEEcccCCCCceEEEEeccCCEEEE--ccCC--CEEEEcCCCCCCCCEEEEECCCC
Confidence            36889999999999742     58999986621 2111   11111111  1111  24599999999999999999999


Q ss_pred             CcceEEeeCCceeeeeCC
Q 005236           81 NPELIMWKGSRKFYRSGP   98 (706)
Q Consensus        81 ~~~~~~~~~~~~yw~sg~   98 (706)
                      +..+  +  +.++|.+|.
T Consensus        99 Nlvl--Y--~~~~Wssgt  112 (115)
T d1dlpa1          99 TVTI--Y--GPGLWDSGT  112 (115)
T ss_dssp             CEEE--E--CSEEEECSC
T ss_pred             cEEE--e--CCCeecCCC
Confidence            8644  4  458999885

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.61  E-value=0.00012  Score=75.35  Aligned_cols=76  Identities=11%  Similarity=0.187  Sum_probs=49.5

Q ss_pred             ceeccCCceeEEEEEeCC-CcEEEEEEcCcc-------chhhHHHHHHHHHHHhhcC-C--cceeeeEeEEEeCCeeEEE
Q 005236          393 KKLGEGGFGPVYKGTLAD-EQEIAVKRLSKI-------SEQGLKELKNEIILFSKLQ-H--RNLVKLLGCCIHGEEKLLI  461 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lV  461 (706)
                      +.||.|....||+.+..+ ++.++||.-...       .+....+...|...++.+. +  ..+++++.+  +.+..++|
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence            678999999999998755 678999964321       1122344566777777662 2  345556544  56677899


Q ss_pred             EecCCCCCh
Q 005236          462 YEFMPNKSL  470 (706)
Q Consensus       462 ~e~~~~gsL  470 (706)
                      ||++++..+
T Consensus       110 mE~L~~~~~  118 (392)
T d2pula1         110 MEDLSHLKI  118 (392)
T ss_dssp             ECCCTTSEE
T ss_pred             EeccCCccc
Confidence            999987543

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=97.57  E-value=8.9e-05  Score=60.84  Aligned_cols=80  Identities=16%  Similarity=0.240  Sum_probs=53.5

Q ss_pred             EEEEecCCcEEEEecCCCCCceEEEeecCCCccc--cc---CCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCC
Q 005236            6 FLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDT--LL---PGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQD   80 (706)
Q Consensus         6 ~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDt--lL---pgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g   80 (706)
                      .+.|..+|||||++..     +.+|+|..++..+  -|   +.-.|-.  ..+.+.  +=|.|.+..+.+.|.+.|+++|
T Consensus        22 ~l~~q~DGNLvly~~~-----~~vW~s~~~~~~~~~~l~l~~~Gnlvl--~~~~g~--~vWsS~t~~~~~~~~l~L~ddG   92 (108)
T d1jpca_          22 VFIMQEDCNLVLYDVD-----KPIWATNTGGLSRSCFLSMQTDGNLVV--YNPSNK--PIWASNTGGQNGNYVCILQKDR   92 (108)
T ss_dssp             EEEECTTSCEEEEETT-----EEEEECCCTTSCSSCEEEECTTSCEEE--ECTTCC--EEEECCCCCSCSCEEEEECTTS
T ss_pred             EEEECCCCeEEEEeCC-----ceeeEeCCCCCCCccEEEEeccceEEE--ECCCcc--ceEEccccCCCCcEEEEEcCCC
Confidence            5789999999999743     7999999987432  11   1111111  122222  3388888778889999999999


Q ss_pred             CcceEEeeCCceeeeeCC
Q 005236           81 NPELIMWKGSRKFYRSGP   98 (706)
Q Consensus        81 ~~~~~~~~~~~~yw~sg~   98 (706)
                      +..++    +.+.|.|+.
T Consensus        93 NlVly----~~~~W~S~t  106 (108)
T d1jpca_          93 NVVIY----GTDRWATGT  106 (108)
T ss_dssp             CEEEE----ECCCCCCCC
T ss_pred             CEEEe----CCCcccCCC
Confidence            86544    245787764

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=97.51  E-value=0.00026  Score=57.89  Aligned_cols=96  Identities=11%  Similarity=0.184  Sum_probs=59.0

Q ss_pred             ccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCCCCCccccccccccCccee
Q 005236           38 DTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFNF  117 (706)
Q Consensus        38 DtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w~g~~~s~~~~~~~~~~~~  117 (706)
                      |||+|||.|.    .|+  .|         ..|+|++.|+.+|+  ++++++..++|.++...........+....  .+
T Consensus         2 ~~L~~g~~L~----~G~--~l---------~ng~~~l~~q~DGN--Lvly~~~~~vW~s~~~~~~~~~~l~l~~~G--nl   62 (108)
T d1jpca_           2 NILYSGETLS----TGE--FL---------NYGSFVFIMQEDCN--LVLYDVDKPIWATNTGGLSRSCFLSMQTDG--NL   62 (108)
T ss_dssp             CEEETTEEEC----TTC--EE---------EETTEEEEECTTSC--EEEEETTEEEEECCCTTSCSSCEEEECTTS--CE
T ss_pred             CCccCCCEec----CCC--EE---------EcCCEEEEECCCCe--EEEEeCCceeeEeCCCCCCCccEEEEeccc--eE
Confidence            7999999993    333  35         35999999999998  567888899998875432211111122111  12


Q ss_pred             EEeecCCeeEEEEEccCCceEEEEEEecccceEEEE
Q 005236          118 SFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRF  153 (706)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~  153 (706)
                      .+.+.......+..........+++|..|| ++..|
T Consensus        63 vl~~~~g~~vWsS~t~~~~~~~~l~L~ddG-NlVly   97 (108)
T d1jpca_          63 VVYNPSNKPIWASNTGGQNGNYVCILQKDR-NVVIY   97 (108)
T ss_dssp             EEECTTCCEEEECCCCCSCSCEEEEECTTS-CEEEE
T ss_pred             EEECCCccceEEccccCCCCcEEEEEcCCC-CEEEe
Confidence            223334444444433334445578899999 88777

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=97.49  E-value=0.00015  Score=60.38  Aligned_cols=82  Identities=16%  Similarity=0.195  Sum_probs=52.9

Q ss_pred             EEEEecCCcEEEEecCCCCCceEEEeecCCCc--ccccCCCccc-ceeecCCceEEEecCCCCCCCCCceEEEEeeCCCc
Q 005236            6 FLFVCYSGNLVLRGERDGGSETYLWQSFDYPS--DTLLPGMKLG-WDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNP   82 (706)
Q Consensus         6 ~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~Pt--DtlLpgqklg-~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~   82 (706)
                      .+.|+.+|||||++..     ..+|+|..+..  ++-|--|.=| .-...+...  +=|.+.+.-+.|.|.+.|+++|+.
T Consensus        33 ~l~mQ~DGNLVLy~~~-----~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~g~--~vWsS~t~~~~~~~~l~Lq~DGNl  105 (119)
T d1b2pa_          33 RFIMQTDCNLVLYDNN-----NPIWATNTGGLGNGCRAVLQPDGVLVVITNENV--TVWQSPVAGKAGHYVLVLQPDRNV  105 (119)
T ss_dssp             EEEECTTSCEEEEETT-----EEEEECCCTTSCSSCEEEECTTSCEEEECTTCC--EEEECSCCCCSSCEEEEECTTSCE
T ss_pred             EEEECCCCcEEEEECC-----eEEEEecCCCCCcceEEEEEeCCCEEEECCCCc--EEEECCCcCCCCceEEEEcCCCCE
Confidence            4789999999999643     68999998764  2222111111 001112222  237777776778999999999986


Q ss_pred             ceEEeeCCceeeeeCC
Q 005236           83 ELIMWKGSRKFYRSGP   98 (706)
Q Consensus        83 ~~~~~~~~~~yw~sg~   98 (706)
                      .++    +.+.|.|+.
T Consensus       106 vlY----g~~~W~S~T  117 (119)
T d1b2pa_         106 VIY----GDALWATQT  117 (119)
T ss_dssp             EEE----ESEEEECCC
T ss_pred             EEE----CCCEeccCC
Confidence            554    357898875

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=97.20  E-value=0.00042  Score=56.69  Aligned_cols=82  Identities=18%  Similarity=0.260  Sum_probs=51.1

Q ss_pred             eEEEEecCCcEEEEecCCCCCceEEEeecCC-Ccc-----cccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEee
Q 005236            5 SFLFVCYSGNLVLRGERDGGSETYLWQSFDY-PSD-----TLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVER   78 (706)
Q Consensus         5 ~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~-PtD-----tlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~   78 (706)
                      -.+.|..+|||||+...     +.+|.|..+ |-.     +|-+.-.|-.-  .+.+..  =|.|.+..+.|.|.+.|++
T Consensus        21 ~~l~~q~dgnLvl~~~~-----~~vW~ant~~~~~~~~~l~l~~dGnLvl~--~~~g~~--vW~s~t~~~~~~~~l~L~d   91 (109)
T d1kj1a_          21 YHFIMQEDCNLVLYDHS-----TSVWASNTGILGKKGCKAVLQSDGNFVVY--DAEGRS--LWASHSVRGNGNYVLVLQE   91 (109)
T ss_dssp             EEEEECTTSCEEEEETT-----EEEEECCCCCTTCCCCEEEECTTSCEEEE--CSSSCE--EEECCCCCCSSCCEEEECT
T ss_pred             EEEEecCCCeEEEEeCC-----EEEEEeCCCCCCceeEEEEEcCCceEEEE--eCCCcE--EEEEeeECCCCCEEEEEeC
Confidence            35788999999999632     789999765 211     11122223221  112222  3777777677889999999


Q ss_pred             CCCcceEEeeCCceeeeeCCC
Q 005236           79 QDNPELIMWKGSRKFYRSGPW   99 (706)
Q Consensus        79 ~g~~~~~~~~~~~~yw~sg~w   99 (706)
                      +|+..++    +.+.|.|+.+
T Consensus        92 dGNlvly----~~~~W~S~t~  108 (109)
T d1kj1a_          92 DGNVVIY----GSDIWSTGTY  108 (109)
T ss_dssp             TSCEEEE----CCEEEECCCC
T ss_pred             CCcEEEE----CCCEecCCCc
Confidence            9986443    3468888753

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=97.13  E-value=0.0012  Score=53.84  Aligned_cols=96  Identities=14%  Similarity=0.128  Sum_probs=55.2

Q ss_pred             ccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCCCCC-ccccccccccCcce
Q 005236           38 DTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGL-RFSAATLRQNPVFN  116 (706)
Q Consensus        38 DtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w~g~-~~s~~~~~~~~~~~  116 (706)
                      |||.|||.|.    .|.  .|+         .|.|++.|+.+|+  ++++....++|.++.-... ......+.....  
T Consensus         2 ~~L~~g~~L~----~g~--~l~---------~g~~~l~~q~dgn--Lvl~~~~~~vW~ant~~~~~~~~~l~l~~dGn--   62 (109)
T d1kj1a_           2 NLLTNGEGLY----AGQ--SLD---------VEPYHFIMQEDCN--LVLYDHSTSVWASNTGILGKKGCKAVLQSDGN--   62 (109)
T ss_dssp             CEEETTCEEE----TTC--EEE---------ETTEEEEECTTSC--EEEEETTEEEEECCCCCTTCCCCEEEECTTSC--
T ss_pred             CCccCCCEEe----CCC--EEE---------eCCEEEEecCCCe--EEEEeCCEEEEEeCCCCCCceeEEEEEcCCce--
Confidence            7899999883    333  354         4899999999998  4667788899987542111 001111222221  


Q ss_pred             eEEeecCCeeEEEEEccCCceEEEEEEecccceEEEE
Q 005236          117 FSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRF  153 (706)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~  153 (706)
                      +...+........-.......-.+++|..|| ++..|
T Consensus        63 Lvl~~~~g~~vW~s~t~~~~~~~~l~L~ddG-Nlvly   98 (109)
T d1kj1a_          63 FVVYDAEGRSLWASHSVRGNGNYVLVLQEDG-NVVIY   98 (109)
T ss_dssp             EEEECSSSCEEEECCCCCCSSCCEEEECTTS-CEEEE
T ss_pred             EEEEeCCCcEEEEEeeECCCCCEEEEEeCCC-cEEEE
Confidence            1122233333333333333334578999999 77776

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.0019  Score=64.10  Aligned_cols=136  Identities=14%  Similarity=0.118  Sum_probs=78.7

Q ss_pred             ceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCccee--eeE-----eEEEeCCeeEEEEecCCCCChhh
Q 005236          400 FGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNLV--KLL-----GCCIHGEEKLLIYEFMPNKSLDS  472 (706)
Q Consensus       400 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv--~l~-----~~~~~~~~~~lV~e~~~~gsL~~  472 (706)
                      --.||+++..+|+.+++|..+.. ....+++..|...+..|....|.  ..+     .........+.++++++|..+..
T Consensus        35 EN~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~  113 (325)
T d1zyla1          35 ENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA  113 (325)
T ss_dssp             SSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred             cceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence            46899999999999999987543 22346678888888777532221  111     12344567789999998754321


Q ss_pred             ----hh----------hc------ccccCCCCHH-------------------HHHHHHHHHHHHHHHHHh----CCCCc
Q 005236          473 ----FI----------FD------QERCKLLDWS-------------------KRFHIICGTARGLLYLHQ----DSRLR  509 (706)
Q Consensus       473 ----~l----------~~------~~~~~~l~~~-------------------~~~~i~~~ia~~l~~LH~----~~~~~  509 (706)
                          .+          +.      ......+++.                   ..-.+...+.+.++.+..    ..+..
T Consensus       114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~  193 (325)
T d1zyla1         114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL  193 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred             CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence                01          10      0001111111                   111122222223333322    22456


Q ss_pred             eEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          510 IIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       510 ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      +||+|+.+.|||++++  ..++||+-+..
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eecCCCCcccEEEeCC--ceEEechhccc
Confidence            8999999999999754  45899998864

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.82  E-value=0.0014  Score=67.14  Aligned_cols=73  Identities=21%  Similarity=0.326  Sum_probs=48.9

Q ss_pred             ceeccCCceeEEEEEeCCC--------cEEEEEEcCccchhhHHHHHHHHHHHhhcCCcce-eeeEeEEEeCCeeEEEEe
Q 005236          393 KKLGEGGFGPVYKGTLADE--------QEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL-VKLLGCCIHGEEKLLIYE  463 (706)
Q Consensus       393 ~~lg~G~~g~Vy~~~~~~~--------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e  463 (706)
                      +.|+.|-.-.+|++...++        +.|++++.... . ......+|..+++.+.-.++ .++++++.    -.+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~-~-~~idr~~E~~i~~~ls~~gl~Pkll~~~~----~g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-E-TESHLVAESVIFTLLSERHLGPKLYGIFS----GGRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-C-CHHHHHHHHHHHHHHHHTTSSSCEEEEET----TEEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc-c-hhhHHHHHHHHHHHHHhCCCCCeEEEEcC----CceEEE
Confidence            6788899999999987543        45666655422 2 23345678888888753344 46777663    268999


Q ss_pred             cCCCCChh
Q 005236          464 FMPNKSLD  471 (706)
Q Consensus       464 ~~~~gsL~  471 (706)
                      |+++.+|.
T Consensus       122 fi~g~~l~  129 (395)
T d1nw1a_         122 YIPSRPLS  129 (395)
T ss_dssp             CCCEEECC
T ss_pred             EeccccCC
Confidence            99886654

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=96.60  E-value=0.0077  Score=49.11  Aligned_cols=82  Identities=21%  Similarity=0.343  Sum_probs=52.6

Q ss_pred             eEEEEecCCcEEEEecCCCCCceEEEeecCCCcccccCCCcccce----e--ecCCceEEEecCCCCCCCCCceEEEEee
Q 005236            5 SFLFVCYSGNLVLRGERDGGSETYLWQSFDYPSDTLLPGMKLGWD----L--KTGLERRITSWKSPDDPSPGNFTWAVER   78 (706)
Q Consensus         5 ~~~~l~~sGNlVl~~~~~~~~~~~~WqSFd~PtDtlLpgqklg~~----~--~tg~~~~L~Sw~s~~dps~G~fsl~~~~   78 (706)
                      -.+.|.++|||||+..+     .++|+|..++..   ++-+|...    .  ..+ ..  .-|.+.+.-..|.+.+.|++
T Consensus        21 ~~l~~q~DGNLvly~~~-----~~vW~s~~~~~~---~~~~l~l~~dGnLvl~~~-~~--~~w~s~t~~~~~~~~l~L~d   89 (112)
T d1xd5a_          21 YLFIIQNDCNLVLYDNN-----RAVWASGTNGKA---SGCVLKMQNDGNLVIYSG-SR--AIWASNTNRQNGNYYLILQR   89 (112)
T ss_dssp             EEEEECTTSCEEEEETT-----EEEEECCCTTSC---SSEEEEECTTSCEEEEET-TE--EEEECCCCCSCCCCEEEECT
T ss_pred             EEEEEcCCCCEEEEcCC-----cEEEEccCccCC---CCcEEEEeccccEEEEec-CC--eEEEEeeccCCCceEEEEcC
Confidence            46889999999999742     799999876531   22222111    0  011 11  24666666667889999999


Q ss_pred             CCCcceEEeeCCceeeeeCC
Q 005236           79 QDNPELIMWKGSRKFYRSGP   98 (706)
Q Consensus        79 ~g~~~~~~~~~~~~yw~sg~   98 (706)
                      +|+..++ -....+.|.|+.
T Consensus        90 dGNlvly-~~~~~~~W~S~t  108 (112)
T d1xd5a_          90 DRNVVIY-DNSNNAIWATHT  108 (112)
T ss_dssp             TSCEEEE-CTTSCEEEECCC
T ss_pred             CCCEEEE-CCCCcEEecCCC
Confidence            9985443 223568898875

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=96.56  E-value=0.0028  Score=52.05  Aligned_cols=90  Identities=11%  Similarity=0.194  Sum_probs=52.8

Q ss_pred             cccccCCCcccceeecCCceEEEecCCCCCCCCCceEEEEeeCCCcceEEeeCCceeeeeCCCCCCccccccccccCcce
Q 005236           37 SDTLLPGMKLGWDLKTGLERRITSWKSPDDPSPGNFTWAVERQDNPELIMWKGSRKFYRSGPWNGLRFSAATLRQNPVFN  116 (706)
Q Consensus        37 tDtlLpgqklg~~~~tg~~~~L~Sw~s~~dps~G~fsl~~~~~g~~~~~~~~~~~~yw~sg~w~g~~~s~~~~~~~~~~~  116 (706)
                      ++||-++|.|                     ..|.|+|.|+.+|+.  +++++..+||.++.- +.......+.....+.
T Consensus        14 ~~tl~~~~~l---------------------~~g~~~l~~q~DGNL--vL~~~~~~vW~s~t~-~~~~~~l~l~~dGNLv   69 (115)
T d1dlpa1          14 PQTLHAAQSL---------------------ELSSFRFTMQSDCNL--VLFDSDVRVWASNTA-GATGCRAVLQSDGLLV   69 (115)
T ss_dssp             CSCCCTTCEE---------------------CSTTEEEEECTTSCE--EEEESSSEEECCCCC-SCSCCBCCBCSSSCBC
T ss_pred             cceecCCCcE---------------------EcCCEEEEECCCCeE--EEEcCCeeEEEcccC-CCCceEEEEeccCCEE
Confidence            4888888888                     578999999999984  567788899998642 1111111122222111


Q ss_pred             eEEeecCCeeEEEEEccCCceEEEEEEecccceEEEE
Q 005236          117 FSFVSSEDELYYTFDLIDKAVFSRIVMNQTLYLRQRF  153 (706)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~  153 (706)
                        +.+..................+++|..|| ++..|
T Consensus        70 --l~d~~~~~vWsS~t~~~~g~y~l~Lq~DG-NlvlY  103 (115)
T d1dlpa1          70 --ILTAQNTIRWSSGTKGSIGNYVLVLQPDR-TVTIY  103 (115)
T ss_dssp             --CBCTTTCCSCCCCCCCCSSCCEEEECSSS-CEEEE
T ss_pred             --EEccCCCEEEEcCCCCCCCCEEEEECCCC-cEEEe
Confidence              11222232222222223333468899999 77766

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.00  E-value=0.011  Score=57.86  Aligned_cols=157  Identities=15%  Similarity=0.033  Sum_probs=82.7

Q ss_pred             HHHHHHhccCCCccce-----eccCCceeEEEEEeCCCcEEEEEEcCccchhhHHHHHHHHHHHhhcCCcce-----eee
Q 005236          379 LATIANATDNFSINKK-----LGEGGFGPVYKGTLADEQEIAVKRLSKISEQGLKELKNEIILFSKLQHRNL-----VKL  448 (706)
Q Consensus       379 ~~~~~~~~~~~~~~~~-----lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~l  448 (706)
                      ..++.....+|.+.+.     |..|---+.|+.+..+| .+++|+.....  ..+++..|+.++..|.+.++     +..
T Consensus         5 ~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi~~   81 (316)
T d2ppqa1           5 EDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPR   81 (316)
T ss_dssp             HHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCB
T ss_pred             HHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccccee
Confidence            3455556667766433     44666688899988665 58999875432  22355566667766643222     211


Q ss_pred             E---eEEEeCCeeEEEEecCCCCChhhhh--------------hcc------cccC------------------CCCHHH
Q 005236          449 L---GCCIHGEEKLLIYEFMPNKSLDSFI--------------FDQ------ERCK------------------LLDWSK  487 (706)
Q Consensus       449 ~---~~~~~~~~~~lV~e~~~~gsL~~~l--------------~~~------~~~~------------------~l~~~~  487 (706)
                      .   .+.........++.++.+......-              +..      ....                  ......
T Consensus        82 ~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (316)
T d2ppqa1          82 KDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKG  161 (316)
T ss_dssp             TTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTT
T ss_pred             cCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchh
Confidence            0   1122344566777777664432110              000      0000                  000111


Q ss_pred             HHHHHHHHHHHHHHHHh-CCCCceEecccCCCcEEEcCCCCeEEeeeccccc
Q 005236          488 RFHIICGTARGLLYLHQ-DSRLRIIHRDLKASNVLLDQDMNPKISDFGLARA  538 (706)
Q Consensus       488 ~~~i~~~ia~~l~~LH~-~~~~~ivH~Dikp~Nill~~~~~~kl~Dfgla~~  538 (706)
                      ....+..+...+...+. .-+..+||+|+.+.||+++.+...-|+||+.+..
T Consensus       162 ~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         162 LREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             HHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence            11222222233333222 1234599999999999999988889999998864

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.87  E-value=0.028  Score=33.81  Aligned_cols=32  Identities=34%  Similarity=0.716  Sum_probs=25.3

Q ss_pred             CCCccCCCCCCCccccCC-CCCcccccCCcccCC
Q 005236          171 DLCDTYALCGDYGICIIS-DLPVCQCLKGFKPKS  203 (706)
Q Consensus       171 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~~  203 (706)
                      |+|.+-..|| +|.|+.- ..-.|.|-.||+|..
T Consensus         2 dECsignpCG-nGTCtNviGgFec~C~~GFepgp   34 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEPGP   34 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECSSSEEECCSSSSCCCS
T ss_pred             CccccCCccC-CceeeecccceEEeecCCcCCCc
Confidence            6899999999 7889543 234799999999863

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.54  E-value=0.059  Score=34.82  Aligned_cols=32  Identities=34%  Similarity=0.714  Sum_probs=24.9

Q ss_pred             CCCcc-CCCCCCCccccCC-CCCcccccCCcccC
Q 005236          171 DLCDT-YALCGDYGICIIS-DLPVCQCLKGFKPK  202 (706)
Q Consensus       171 ~~C~~-~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  202 (706)
                      |+|.. ...|..+|.|... ..-.|.|++||+-.
T Consensus         4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~   37 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCINTLGSFECQCLQGYTGP   37 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST
T ss_pred             ccccCCCCCCCCCcEeECCCCCEEeECCCCCcCC
Confidence            67775 5789999999655 34589999999743

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.17  E-value=0.14  Score=32.30  Aligned_cols=32  Identities=34%  Similarity=0.785  Sum_probs=24.4

Q ss_pred             CCCccCCCCCCCccccCC-CCCcccccCCcccCC
Q 005236          171 DLCDTYALCGDYGICIIS-DLPVCQCLKGFKPKS  203 (706)
Q Consensus       171 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~~  203 (706)
                      |.|. ...|...|.|... ..-.|.|++||+-..
T Consensus         1 D~C~-~~PC~ngg~C~~~~~~y~C~C~~G~~G~~   33 (39)
T d1xkba1           1 DQCE-TSPCQNQGKCKDGLGEYTCTCLEGFEGKN   33 (39)
T ss_dssp             CTTT-TCCCCSSCEECCCSSSCCEECCTTEETTT
T ss_pred             CcCC-CCCCCCCcEEECCCCCEEEECCCCCCcCc
Confidence            4565 4789999999655 446899999998543

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.80  E-value=0.16  Score=33.00  Aligned_cols=32  Identities=28%  Similarity=0.650  Sum_probs=23.2

Q ss_pred             CCCcc-CCCCCCCccccCC-CCCcccccCCcccCC
Q 005236          171 DLCDT-YALCGDYGICIIS-DLPVCQCLKGFKPKS  203 (706)
Q Consensus       171 ~~C~~-~~~CG~~g~C~~~-~~~~C~C~~Gf~~~~  203 (706)
                      |+|.. ...| .++.|... .+-.|.|++||+...
T Consensus         4 dEC~~~~~~C-~~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           4 DECRISPDLC-GRGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CTTTTCSSTT-TTSCEEEETTEEEECCCSSEEECT
T ss_pred             cccCCCCCCC-CCCEeEcCCCCeEEeCCCCCccCC
Confidence            67876 4455 47999655 445899999998643

>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.29  E-value=0.16  Score=29.75  Aligned_cols=19  Identities=21%  Similarity=0.550  Sum_probs=15.3

Q ss_pred             cccCCCCCcccccCCcccC
Q 005236          184 ICIISDLPVCQCLKGFKPK  202 (706)
Q Consensus       184 ~C~~~~~~~C~C~~Gf~~~  202 (706)
                      .|+.+....|+||.||..-
T Consensus        11 dCdP~~p~~C~CPeGyIld   29 (35)
T d1dx5i2          11 DCDPNTQASCECPEGYILD   29 (35)
T ss_dssp             EECTTSTTCEECCTTEEEE
T ss_pred             ccCCCCCCcccCCCceEec
Confidence            5777777889999999753

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.66  E-value=0.37  Score=30.98  Aligned_cols=31  Identities=26%  Similarity=0.465  Sum_probs=23.6

Q ss_pred             CCCCccCCCCCCCccccCC-CCCcccccCCccc
Q 005236          170 RDLCDTYALCGDYGICIIS-DLPVCQCLKGFKP  201 (706)
Q Consensus       170 ~~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~  201 (706)
                      .|+|..+. |+.++.|... .+-.|.|++||..
T Consensus         5 idEC~~~~-~~~~~~C~Nt~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           5 MDECKEPD-VCKHGQCINTDGSYRCECPFGYIL   36 (43)
T ss_dssp             CCSSSSTT-SCSSSCCCCCSSCCCCCCCTTEEE
T ss_pred             eeccCCcC-CCCCCEeECCCCCeEeECCCCccc
Confidence            37897654 5578999665 4558999999986

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.22  E-value=0.2  Score=31.50  Aligned_cols=31  Identities=19%  Similarity=0.526  Sum_probs=23.5

Q ss_pred             CCCccCCCCCCCccccCC-CCCcccccCCcccC
Q 005236          171 DLCDTYALCGDYGICIIS-DLPVCQCLKGFKPK  202 (706)
Q Consensus       171 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  202 (706)
                      |.|. ...|...|.|... ..-.|.|++||.-.
T Consensus         2 d~C~-~~PC~n~g~C~~~~~~y~C~C~~G~~G~   33 (39)
T d2vj3a2           2 NECV-SNPCQNDATCLDQIGEFQCICMPGYEGV   33 (39)
T ss_dssp             CTTT-TCCCCSSCEEEECSSCEEEECCTTEESS
T ss_pred             cCCc-CCCCCCCCEEECCCCCEEEeCCCCCccC
Confidence            4564 4679999999654 44589999999854

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.82  E-value=0.36  Score=30.66  Aligned_cols=30  Identities=30%  Similarity=0.656  Sum_probs=22.9

Q ss_pred             CCCccCCCCCCCccccCC-CCCcccccCCcccC
Q 005236          171 DLCDTYALCGDYGICIIS-DLPVCQCLKGFKPK  202 (706)
Q Consensus       171 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  202 (706)
                      |+|...+.|  ..+|... .+-.|.|++||...
T Consensus         2 dEC~~~~~C--~~~C~n~~Gsy~C~C~~Gy~L~   32 (41)
T d1i0ua2           2 DECQDPDTC--SQLCVNLEGGYKCQCEEGFQLD   32 (41)
T ss_dssp             CTTTTTTSC--SSCEECSSSCCEECCCTTEEEC
T ss_pred             ccCCCCCCC--CCEeECCCCCEEeECCCCCeEC
Confidence            678877777  4689655 44589999999974

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.22  E-value=0.21  Score=31.49  Aligned_cols=32  Identities=31%  Similarity=0.565  Sum_probs=24.7

Q ss_pred             CCCCccCCCCCCCccccCC-CCCcccccCCcccC
Q 005236          170 RDLCDTYALCGDYGICIIS-DLPVCQCLKGFKPK  202 (706)
Q Consensus       170 ~~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  202 (706)
                      .|+|. ...|-..|.|... ...+|.|++||+-.
T Consensus         3 ~d~C~-~~PC~ngg~C~~~~~~y~C~C~~g~~G~   35 (39)
T d1edmb_           3 GDQCE-SNPCLNGGSCKDDINSYECWCPFGFEGK   35 (39)
T ss_dssp             CCTTT-TCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred             cccCC-CCCCCCCcEEEcCCCCEEEECCCCCCCC
Confidence            36786 5789999999654 34589999999754