Query 005237
Match_columns 706
No_of_seqs 141 out of 752
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 19:30:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 96.9 0.0058 2E-07 62.1 11.5 170 452-660 71-242 (261)
2 3dtn_A Putative methyltransfer 95.8 0.047 1.6E-06 52.7 10.6 175 441-660 33-211 (234)
3 1vl5_A Unknown conserved prote 95.2 0.46 1.6E-05 46.6 15.4 109 442-578 28-138 (260)
4 3dh0_A SAM dependent methyltra 94.7 0.87 3E-05 43.1 15.4 113 441-578 27-141 (219)
5 2r3s_A Uncharacterized protein 94.3 0.84 2.9E-05 46.5 15.3 116 441-582 153-274 (335)
6 2aot_A HMT, histamine N-methyl 94.2 0.5 1.7E-05 47.6 13.2 117 450-578 51-170 (292)
7 1xxl_A YCGJ protein; structura 93.7 1.9 6.6E-05 41.8 15.9 110 441-578 11-122 (239)
8 3mgg_A Methyltransferase; NYSG 93.7 1 3.6E-05 44.4 14.1 104 450-579 36-141 (276)
9 1x19_A CRTF-related protein; m 93.3 1.1 3.7E-05 46.7 14.0 116 439-581 178-297 (359)
10 3dp7_A SAM-dependent methyltra 93.2 1.1 3.6E-05 47.1 14.0 116 442-581 170-289 (363)
11 3hnr_A Probable methyltransfer 93.0 0.85 2.9E-05 43.2 11.8 110 440-579 34-144 (220)
12 3mcz_A O-methyltransferase; ad 92.4 1.6 5.5E-05 44.9 13.8 116 442-581 169-289 (352)
13 3ujc_A Phosphoethanolamine N-m 92.3 3.4 0.00012 39.9 15.2 130 422-578 27-157 (266)
14 4a6d_A Hydroxyindole O-methylt 92.0 0.51 1.7E-05 49.6 9.6 117 439-581 167-285 (353)
15 1qzz_A RDMB, aclacinomycin-10- 91.7 2.3 7.7E-05 44.2 14.0 113 441-580 172-288 (374)
16 3m70_A Tellurite resistance pr 91.6 1.5 5E-05 43.7 12.0 111 441-578 110-221 (286)
17 3dlc_A Putative S-adenosyl-L-m 90.9 2.4 8.3E-05 39.5 12.1 113 439-579 32-147 (219)
18 2ip2_A Probable phenazine-spec 90.6 2.2 7.6E-05 43.6 12.5 116 440-581 157-274 (334)
19 3jwg_A HEN1, methyltransferase 90.4 1.8 6.1E-05 41.1 10.9 117 441-581 19-142 (219)
20 3i53_A O-methyltransferase; CO 90.3 1.8 6.2E-05 44.4 11.6 111 443-580 161-275 (332)
21 4fsd_A Arsenic methyltransfera 90.2 3.4 0.00012 43.6 13.9 113 451-578 83-201 (383)
22 3gu3_A Methyltransferase; alph 89.7 6.1 0.00021 39.5 14.6 103 450-578 21-124 (284)
23 3jwh_A HEN1; methyltransferase 89.5 3 0.0001 39.6 11.7 116 442-581 20-142 (217)
24 3reo_A (ISO)eugenol O-methyltr 89.5 0.96 3.3E-05 47.7 8.9 108 441-581 192-302 (368)
25 3p9n_A Possible methyltransfer 88.9 2.3 7.9E-05 39.6 10.2 109 451-583 44-156 (189)
26 3gwz_A MMCR; methyltransferase 88.9 3.6 0.00012 43.2 12.8 115 440-581 191-309 (369)
27 1tw3_A COMT, carminomycin 4-O- 88.9 4.7 0.00016 41.6 13.5 114 441-581 173-290 (360)
28 3vc1_A Geranyl diphosphate 2-C 88.9 5 0.00017 40.6 13.5 110 441-578 106-219 (312)
29 3htx_A HEN1; HEN1, small RNA m 88.4 2.1 7E-05 51.3 11.3 121 442-581 712-836 (950)
30 3p9c_A Caffeic acid O-methyltr 88.2 1.3 4.4E-05 46.7 8.8 108 441-581 190-300 (364)
31 3kkz_A Uncharacterized protein 88.0 7.6 0.00026 38.1 13.8 126 425-578 19-148 (267)
32 2xvm_A Tellurite resistance pr 87.9 5 0.00017 36.9 11.7 111 440-577 21-133 (199)
33 3u81_A Catechol O-methyltransf 87.2 4.1 0.00014 39.0 11.0 111 452-581 59-171 (221)
34 1kpg_A CFA synthase;, cyclopro 86.9 8.1 0.00028 38.2 13.4 110 441-578 54-166 (287)
35 3sm3_A SAM-dependent methyltra 86.9 2.2 7.5E-05 40.3 8.8 102 452-578 31-139 (235)
36 3hem_A Cyclopropane-fatty-acyl 86.3 12 0.00041 37.5 14.4 112 441-578 62-181 (302)
37 4htf_A S-adenosylmethionine-de 85.8 8.2 0.00028 38.2 12.7 109 443-579 61-172 (285)
38 3ocj_A Putative exported prote 85.5 10 0.00034 38.3 13.4 169 451-661 118-289 (305)
39 3ege_A Putative methyltransfer 85.4 3.5 0.00012 40.6 9.7 111 440-584 23-135 (261)
40 3g5l_A Putative S-adenosylmeth 85.3 8.1 0.00028 37.4 12.1 112 439-579 32-144 (253)
41 3bkx_A SAM-dependent methyltra 84.7 15 0.0005 35.9 13.8 125 441-583 33-163 (275)
42 3dli_A Methyltransferase; PSI- 84.4 3.2 0.00011 40.1 8.7 96 452-578 42-138 (240)
43 3lcv_B Sisomicin-gentamicin re 84.4 5.8 0.0002 41.5 11.0 133 442-608 125-259 (281)
44 3bus_A REBM, methyltransferase 84.3 9.2 0.00031 37.3 12.1 111 441-578 51-164 (273)
45 1wy7_A Hypothetical protein PH 84.3 18 0.00063 33.7 13.8 93 451-571 49-141 (207)
46 1dus_A MJ0882; hypothetical pr 83.5 5 0.00017 36.4 9.2 114 439-580 40-157 (194)
47 3hm2_A Precorrin-6Y C5,15-meth 82.9 17 0.00057 32.7 12.5 111 441-579 15-126 (178)
48 3e8s_A Putative SAM dependent 82.5 8.3 0.00029 36.0 10.6 110 439-579 40-151 (227)
49 4dcm_A Ribosomal RNA large sub 82.4 7 0.00024 41.6 11.1 118 439-579 210-333 (375)
50 3frh_A 16S rRNA methylase; met 82.4 3.8 0.00013 42.2 8.6 123 452-609 106-230 (253)
51 2yxd_A Probable cobalt-precorr 82.4 16 0.00054 32.8 12.1 104 442-579 26-130 (183)
52 1nkv_A Hypothetical protein YJ 82.3 16 0.00054 35.2 12.8 111 440-578 25-138 (256)
53 3f4k_A Putative methyltransfer 82.1 18 0.00061 34.8 13.1 125 427-579 21-149 (257)
54 1ve3_A Hypothetical protein PH 81.9 15 0.00053 34.4 12.2 102 452-579 39-141 (227)
55 3h2b_A SAM-dependent methyltra 81.8 5.9 0.0002 36.9 9.2 98 452-579 42-140 (203)
56 3ccf_A Cyclopropane-fatty-acyl 81.7 9.9 0.00034 37.6 11.3 106 441-579 47-153 (279)
57 2o57_A Putative sarcosine dime 81.4 20 0.00069 35.5 13.5 111 441-578 68-185 (297)
58 3lst_A CALO1 methyltransferase 80.7 4.1 0.00014 42.2 8.4 110 441-580 174-287 (348)
59 4e2x_A TCAB9; kijanose, tetron 80.2 2.5 8.4E-05 44.8 6.6 109 442-579 98-207 (416)
60 1wzn_A SAM-dependent methyltra 79.8 10 0.00035 36.5 10.4 112 443-580 33-145 (252)
61 3ofk_A Nodulation protein S; N 78.7 11 0.00038 35.3 10.1 111 442-579 42-153 (216)
62 2fk8_A Methoxy mycolic acid sy 78.7 30 0.001 34.7 13.9 110 441-578 80-192 (318)
63 3q7e_A Protein arginine N-meth 78.6 9.3 0.00032 39.9 10.3 104 452-580 67-173 (349)
64 1y8c_A S-adenosylmethionine-de 78.3 7 0.00024 37.1 8.6 104 451-580 37-142 (246)
65 2ift_A Putative methylase HI07 78.2 14 0.00049 35.0 10.7 104 453-582 55-165 (201)
66 2fpo_A Methylase YHHF; structu 78.1 8.3 0.00028 36.7 9.0 102 453-581 56-161 (202)
67 3r0q_C Probable protein argini 77.9 16 0.00055 38.6 12.0 114 441-580 53-169 (376)
68 3ou2_A SAM-dependent methyltra 77.0 11 0.00037 35.1 9.4 108 440-578 34-144 (218)
69 2qe6_A Uncharacterized protein 76.8 56 0.0019 32.8 15.2 138 423-579 45-195 (274)
70 3e05_A Precorrin-6Y C5,15-meth 76.6 30 0.001 32.2 12.4 110 441-579 30-141 (204)
71 3njr_A Precorrin-6Y methylase; 76.2 42 0.0014 31.9 13.4 105 441-579 45-153 (204)
72 2p35_A Trans-aconitate 2-methy 75.3 11 0.00037 36.4 9.1 107 442-579 24-131 (259)
73 2esr_A Methyltransferase; stru 75.1 11 0.00038 34.3 8.7 106 451-583 31-141 (177)
74 3lpm_A Putative methyltransfer 74.6 47 0.0016 32.5 13.7 108 451-579 49-175 (259)
75 3mq2_A 16S rRNA methyltransfer 74.5 7.9 0.00027 36.6 7.8 118 442-579 18-139 (218)
76 3eey_A Putative rRNA methylase 73.4 27 0.00091 32.3 11.0 106 453-578 24-137 (197)
77 3d2l_A SAM-dependent methyltra 73.2 21 0.0007 33.9 10.4 109 443-580 27-137 (243)
78 2yqz_A Hypothetical protein TT 72.7 28 0.00096 33.4 11.3 102 450-579 38-140 (263)
79 1jsx_A Glucose-inhibited divis 72.3 27 0.00091 32.5 10.8 98 453-581 67-166 (207)
80 3bkw_A MLL3908 protein, S-aden 72.1 45 0.0015 31.5 12.5 110 441-579 33-143 (243)
81 3cc8_A Putative methyltransfer 71.2 38 0.0013 31.5 11.6 107 440-579 22-129 (230)
82 2kw5_A SLR1183 protein; struct 70.9 57 0.0019 30.0 12.7 98 454-579 32-130 (202)
83 1xtp_A LMAJ004091AAA; SGPP, st 70.7 17 0.00059 34.8 9.3 113 441-579 83-196 (254)
84 3grz_A L11 mtase, ribosomal pr 70.6 13 0.00046 34.6 8.3 110 437-578 44-157 (205)
85 3fzg_A 16S rRNA methylase; met 70.4 12 0.00042 37.2 8.2 124 453-609 51-176 (200)
86 2o07_A Spermidine synthase; st 70.4 18 0.00063 37.2 9.9 135 452-607 96-233 (304)
87 2y1w_A Histone-arginine methyl 70.3 23 0.0008 36.8 10.8 114 440-579 39-154 (348)
88 3lcc_A Putative methyl chlorid 68.6 42 0.0014 31.9 11.5 99 453-578 68-169 (235)
89 2p7i_A Hypothetical protein; p 68.2 22 0.00074 33.5 9.3 106 441-578 31-139 (250)
90 3cgg_A SAM-dependent methyltra 67.9 29 0.00098 31.3 9.7 108 441-579 37-146 (195)
91 3bgv_A MRNA CAP guanine-N7 met 67.8 26 0.00089 35.3 10.3 114 451-579 34-154 (313)
92 1yzh_A TRNA (guanine-N(7)-)-me 67.3 55 0.0019 30.8 11.9 111 451-581 41-157 (214)
93 1nv8_A HEMK protein; class I a 67.1 38 0.0013 34.3 11.3 110 452-583 124-252 (284)
94 1fp1_D Isoliquiritigenin 2'-O- 67.0 21 0.00072 37.2 9.7 107 441-580 198-307 (372)
95 3bwc_A Spermidine synthase; SA 66.7 27 0.00091 35.7 10.2 112 452-581 96-211 (304)
96 3iv6_A Putative Zn-dependent a 66.6 15 0.00053 37.3 8.3 111 441-578 35-146 (261)
97 1ws6_A Methyltransferase; stru 66.4 10 0.00036 33.8 6.3 105 452-582 42-149 (171)
98 1iy9_A Spermidine synthase; ro 65.9 41 0.0014 33.9 11.3 134 452-608 76-214 (275)
99 1l3i_A Precorrin-6Y methyltran 64.3 73 0.0025 28.5 11.7 105 442-578 24-132 (192)
100 3adn_A Spermidine synthase; am 64.3 19 0.00065 37.0 8.5 135 452-608 84-223 (294)
101 3thr_A Glycine N-methyltransfe 63.8 17 0.00057 35.9 7.8 122 441-579 47-174 (293)
102 3e23_A Uncharacterized protein 63.6 16 0.00055 34.2 7.3 96 452-579 44-140 (211)
103 3g89_A Ribosomal RNA small sub 63.1 44 0.0015 33.1 10.7 104 450-580 79-184 (249)
104 3g5t_A Trans-aconitate 3-methy 63.0 50 0.0017 32.8 11.2 112 450-578 35-147 (299)
105 3b3j_A Histone-arginine methyl 62.7 13 0.00044 41.1 7.3 114 441-580 148-263 (480)
106 2p8j_A S-adenosylmethionine-de 62.4 29 0.00098 32.1 8.7 103 452-579 24-127 (209)
107 1xj5_A Spermidine synthase 1; 62.2 33 0.0011 36.0 10.0 135 452-605 121-257 (334)
108 2jjq_A Uncharacterized RNA met 62.0 85 0.0029 33.9 13.5 95 453-579 292-386 (425)
109 3i9f_A Putative type 11 methyl 61.6 40 0.0014 30.2 9.3 103 442-579 8-111 (170)
110 2pjd_A Ribosomal RNA small sub 61.5 12 0.00042 38.7 6.6 117 439-579 184-302 (343)
111 1o9g_A RRNA methyltransferase; 61.5 63 0.0021 31.3 11.4 56 443-507 43-98 (250)
112 3uwp_A Histone-lysine N-methyl 61.5 23 0.0008 39.1 9.0 120 439-578 161-286 (438)
113 1zg3_A Isoflavanone 4'-O-methy 61.4 23 0.00077 36.7 8.6 106 442-580 182-294 (358)
114 1inl_A Spermidine synthase; be 61.3 44 0.0015 34.0 10.6 134 453-608 92-230 (296)
115 3g2m_A PCZA361.24; SAM-depende 60.6 9.3 0.00032 38.2 5.3 112 441-580 73-190 (299)
116 1g6q_1 HnRNP arginine N-methyl 59.6 52 0.0018 33.9 10.9 114 441-579 28-144 (328)
117 2ex4_A Adrenal gland protein A 59.5 43 0.0015 32.0 9.7 103 451-578 79-183 (241)
118 1dl5_A Protein-L-isoaspartate 58.3 69 0.0024 32.6 11.5 110 440-579 64-174 (317)
119 2fhp_A Methylase, putative; al 58.1 56 0.0019 29.4 9.7 108 451-582 44-156 (187)
120 1uwv_A 23S rRNA (uracil-5-)-me 58.0 87 0.003 33.6 12.7 110 443-579 278-388 (433)
121 3dmg_A Probable ribosomal RNA 57.6 59 0.002 34.6 11.2 106 451-580 233-340 (381)
122 1zx0_A Guanidinoacetate N-meth 56.1 51 0.0017 31.6 9.5 106 451-578 60-168 (236)
123 2yxe_A Protein-L-isoaspartate 55.6 79 0.0027 29.4 10.6 107 442-578 68-175 (215)
124 3l8d_A Methyltransferase; stru 55.5 65 0.0022 30.4 10.1 97 451-579 53-152 (242)
125 3mti_A RRNA methylase; SAM-dep 54.9 50 0.0017 30.1 8.9 104 453-579 24-134 (185)
126 2b3t_A Protein methyltransfera 54.6 56 0.0019 32.3 9.8 114 443-580 102-238 (276)
127 1ri5_A MRNA capping enzyme; me 54.6 87 0.003 30.5 11.1 106 451-579 64-173 (298)
128 3giw_A Protein of unknown func 54.3 1.4E+02 0.0049 30.7 13.0 145 420-579 43-199 (277)
129 3m33_A Uncharacterized protein 54.1 39 0.0013 32.3 8.3 31 452-491 49-79 (226)
130 3fut_A Dimethyladenosine trans 54.0 93 0.0032 31.6 11.5 109 441-581 37-146 (271)
131 3lbf_A Protein-L-isoaspartate 53.8 1.1E+02 0.0036 28.4 11.1 106 441-579 67-173 (210)
132 1ne2_A Hypothetical protein TA 53.4 38 0.0013 31.4 7.9 95 451-578 51-145 (200)
133 3dr5_A Putative O-methyltransf 52.7 59 0.002 31.5 9.4 110 445-580 50-163 (221)
134 2vdw_A Vaccinia virus capping 52.2 99 0.0034 31.5 11.4 105 452-578 49-167 (302)
135 3tm4_A TRNA (guanine N2-)-meth 52.2 1.2E+02 0.0041 31.8 12.3 108 449-578 215-329 (373)
136 1uir_A Polyamine aminopropyltr 52.0 45 0.0015 34.3 8.8 112 452-580 78-195 (314)
137 2i7c_A Spermidine synthase; tr 51.9 30 0.001 35.0 7.4 134 452-607 79-216 (283)
138 2pt6_A Spermidine synthase; tr 50.9 29 0.00098 36.0 7.2 134 452-607 117-254 (321)
139 3ggd_A SAM-dependent methyltra 50.8 40 0.0014 32.2 7.8 106 452-581 57-165 (245)
140 2ozv_A Hypothetical protein AT 50.4 54 0.0018 32.4 8.9 128 442-581 26-171 (260)
141 3evz_A Methyltransferase; NYSG 49.3 1.7E+02 0.0057 27.5 11.9 107 451-579 55-178 (230)
142 4hg2_A Methyltransferase type 48.3 1.2E+02 0.0042 30.2 11.2 94 454-581 42-137 (257)
143 3pfg_A N-methyltransferase; N, 47.9 60 0.002 31.4 8.6 98 452-579 51-150 (263)
144 3ftd_A Dimethyladenosine trans 47.4 98 0.0033 30.8 10.3 109 441-581 21-132 (249)
145 3tfw_A Putative O-methyltransf 46.8 76 0.0026 31.0 9.2 103 452-580 64-170 (248)
146 1mjf_A Spermidine synthase; sp 46.7 39 0.0013 34.1 7.2 131 453-608 77-218 (281)
147 1xdz_A Methyltransferase GIDB; 46.5 1.1E+02 0.0039 29.3 10.4 102 452-580 71-174 (240)
148 2fyt_A Protein arginine N-meth 44.9 1.2E+02 0.0041 31.4 10.8 113 441-578 54-169 (340)
149 3gjy_A Spermidine synthase; AP 44.8 67 0.0023 33.7 8.9 135 450-609 88-225 (317)
150 2ipx_A RRNA 2'-O-methyltransfe 44.6 1.3E+02 0.0044 28.6 10.3 104 451-579 77-181 (233)
151 3mb5_A SAM-dependent methyltra 44.6 1.2E+02 0.004 29.1 10.1 108 442-579 84-193 (255)
152 2gs9_A Hypothetical protein TT 43.9 82 0.0028 29.2 8.6 102 442-578 28-130 (211)
153 2b2c_A Spermidine synthase; be 43.6 47 0.0016 34.4 7.4 134 452-608 109-247 (314)
154 1fp2_A Isoflavone O-methyltran 43.0 38 0.0013 34.9 6.6 98 451-581 188-290 (352)
155 3dxy_A TRNA (guanine-N(7)-)-me 42.8 80 0.0027 30.5 8.6 112 451-581 34-151 (218)
156 2nxc_A L11 mtase, ribosomal pr 42.6 93 0.0032 30.5 9.2 107 440-578 107-216 (254)
157 3g07_A 7SK snRNA methylphospha 42.3 12 0.00042 37.6 2.8 48 451-509 46-93 (292)
158 2fca_A TRNA (guanine-N(7)-)-me 41.3 2.2E+02 0.0074 27.0 11.3 110 451-580 38-153 (213)
159 3id6_C Fibrillarin-like rRNA/T 40.3 2.8E+02 0.0097 27.4 12.4 114 441-579 63-180 (232)
160 2gb4_A Thiopurine S-methyltran 38.0 1.9E+02 0.0064 28.6 10.6 33 450-491 67-99 (252)
161 4hc4_A Protein arginine N-meth 37.9 1.1E+02 0.0036 32.9 9.3 99 454-578 86-187 (376)
162 1pjz_A Thiopurine S-methyltran 37.1 1.3E+02 0.0045 28.2 8.9 32 451-491 22-53 (203)
163 2b25_A Hypothetical protein; s 37.1 1.8E+02 0.0062 29.5 10.6 71 430-510 84-154 (336)
164 1i1n_A Protein-L-isoaspartate 37.0 2.4E+02 0.0083 26.3 10.8 56 442-507 66-123 (226)
165 1vbf_A 231AA long hypothetical 35.7 1.6E+02 0.0056 27.6 9.4 104 442-579 61-164 (231)
166 2gpy_A O-methyltransferase; st 35.2 1.3E+02 0.0045 28.5 8.7 100 453-579 56-159 (233)
167 2f8l_A Hypothetical protein LM 35.1 2E+02 0.0068 29.5 10.6 85 450-552 129-213 (344)
168 2ksn_A Ubiquitin domain-contai 35.0 45 0.0015 31.4 5.0 40 344-384 55-94 (137)
169 2pwy_A TRNA (adenine-N(1)-)-me 34.8 3E+02 0.01 26.1 11.2 57 441-507 86-142 (258)
170 1jg1_A PIMT;, protein-L-isoasp 34.7 1.9E+02 0.0064 27.5 9.8 107 441-580 81-189 (235)
171 2pxx_A Uncharacterized protein 34.2 74 0.0025 29.2 6.5 34 450-491 41-74 (215)
172 2zfu_A Nucleomethylin, cerebra 33.5 1E+02 0.0035 28.6 7.5 38 442-491 57-95 (215)
173 1i9g_A Hypothetical protein RV 33.3 3.3E+02 0.011 26.3 11.4 59 441-509 89-147 (280)
174 1o54_A SAM-dependent O-methylt 33.1 2.2E+02 0.0074 27.9 10.2 108 442-580 103-213 (277)
175 1ixk_A Methyltransferase; open 32.9 3E+02 0.01 28.0 11.5 68 439-520 106-174 (315)
176 1yb2_A Hypothetical protein TA 32.7 2E+02 0.0068 28.3 9.8 107 442-579 101-210 (275)
177 3gdh_A Trimethylguanosine synt 32.0 3.3E+02 0.011 25.6 12.3 76 451-551 78-155 (241)
178 4azs_A Methyltransferase WBDD; 31.8 94 0.0032 34.6 8.0 61 451-528 66-127 (569)
179 1vlm_A SAM-dependent methyltra 31.8 1.6E+02 0.0055 27.6 8.6 23 640-662 165-187 (219)
180 3tr6_A O-methyltransferase; ce 31.7 87 0.003 29.4 6.7 106 453-580 66-174 (225)
181 3ntv_A MW1564 protein; rossman 31.6 1E+02 0.0035 29.6 7.3 102 451-580 71-176 (232)
182 3orh_A Guanidinoacetate N-meth 31.3 1.5E+02 0.0053 28.5 8.6 107 451-578 60-168 (236)
183 4dzr_A Protein-(glutamine-N5) 31.2 43 0.0015 30.7 4.3 43 442-491 20-63 (215)
184 3bxo_A N,N-dimethyltransferase 30.6 2.4E+02 0.0081 26.3 9.6 22 639-660 203-224 (239)
185 2qm3_A Predicted methyltransfe 30.4 2.2E+02 0.0075 29.6 10.1 96 452-574 173-271 (373)
186 2vdv_E TRNA (guanine-N(7)-)-me 29.9 3.7E+02 0.013 25.8 11.0 48 451-509 49-96 (246)
187 2h1r_A Dimethyladenosine trans 29.5 2.3E+02 0.0078 28.7 9.8 43 440-491 31-73 (299)
188 3fpf_A Mtnas, putative unchara 28.3 4.1E+02 0.014 27.6 11.6 99 451-580 122-222 (298)
189 3tma_A Methyltransferase; thum 28.2 3.6E+02 0.012 27.6 11.2 112 443-575 195-312 (354)
190 2i62_A Nicotinamide N-methyltr 27.5 1.1E+02 0.0039 29.0 6.8 21 642-662 218-238 (265)
191 2a14_A Indolethylamine N-methy 27.3 2E+02 0.007 28.0 8.8 21 642-662 217-237 (263)
192 1u2z_A Histone-lysine N-methyl 25.4 1.5E+02 0.0051 32.4 8.0 120 441-579 232-358 (433)
193 2avn_A Ubiquinone/menaquinone 24.1 3.1E+02 0.011 26.3 9.3 32 451-491 54-85 (260)
194 3duw_A OMT, O-methyltransferas 24.0 1.4E+02 0.0048 27.9 6.6 106 452-580 59-167 (223)
195 1zq9_A Probable dimethyladenos 23.9 3.6E+02 0.012 27.0 10.0 42 441-491 18-59 (285)
196 3gru_A Dimethyladenosine trans 23.3 5.4E+02 0.018 26.3 11.3 54 441-507 40-93 (295)
197 2qn6_B Translation initiation 22.2 50 0.0017 28.9 2.7 43 478-520 49-91 (93)
198 2yxl_A PH0851 protein, 450AA l 21.0 6.7E+02 0.023 26.8 12.0 68 439-520 247-315 (450)
199 2h00_A Methyltransferase 10 do 20.5 1.9E+02 0.0066 27.7 7.0 57 451-522 65-123 (254)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=96.87 E-value=0.0058 Score=62.13 Aligned_cols=170 Identities=9% Similarity=0.122 Sum_probs=88.9
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISAS 531 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~ 531 (706)
.-+|+|+|.|.|. +...|+++- +.|..+||||+.+ +.-|+.+.+++.++. ...+++|..-.+.+
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s----~~ml~~A~~~~~~~~--~~~~v~~~~~D~~~----- 134 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNS----PAMIERCRRHIDAYK--APTPVDVIEGDIRD----- 134 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESC----HHHHHHHHHHHHTSC--CSSCEEEEESCTTT-----
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECC----HHHHHHHHHHHHhhc--cCceEEEeeccccc-----
Confidence 3479999999884 445566443 3567899999964 223555555554321 22345554322211
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE-eecCCCCCCCChHHHHHHHHHHHHHHhhhhhc
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS-LDRSCDRPDFPFAHHMVHALQSYSGLLESLDS 609 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl-vEqeadhns~~F~~RF~EAL~yYsAlFDSLDa 609 (706)
+...+-++|+.|+.++.+.. ..+..+|+.| |.|+|..+++ +|.-.. .++.+...+.+ +++.......+..
T Consensus 135 ----~~~~~~d~v~~~~~l~~~~~--~~~~~~l~~i~~~LkpGG~lii~e~~~~-~~~~~~~~~~~-~~~~~~~~~g~s~ 206 (261)
T 4gek_A 135 ----IAIENASMVVLNFTLQFLEP--SERQALLDKIYQGLNPGGALVLSEKFSF-EDAKVGELLFN-MHHDFKRANGYSE 206 (261)
T ss_dssp ----CCCCSEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEBCC-SSHHHHHHHHH-HHHHHHHHTTGGG
T ss_pred ----ccccccccceeeeeeeecCc--hhHhHHHHHHHHHcCCCcEEEEEeccCC-CCHHHHHHHHH-HHHHHHHHcCCCH
Confidence 22224467777877764421 2355678776 6799998665 454322 12222222222 1111111111111
Q ss_pred CCCChHHHHHHHHHhhhhhHhhhhccccCCCCChhhHHHHHHhCCCccccC
Q 005237 610 VNVNLDALQKIERFLVYPCIEKIVLGRHRSPERLPPWRSLFMQSGFAPLTF 660 (706)
Q Consensus 610 ~~~~~d~R~~IEr~llg~eI~nIVa~R~ERhE~~~~Wr~Rm~rAGF~pvpL 660 (706)
.. -...+.. ++++ -+..+.+.++.+|++|||..+.+
T Consensus 207 ~e-i~~~~~~---------l~~~-----~~~~s~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 207 LE-ISQKRSM---------LENV-----MLTDSVETHKARLHKAGFEHSEL 242 (261)
T ss_dssp ST-THHHHHH---------HHHH-----CCCBCHHHHHHHHHHHTCSEEEE
T ss_pred HH-HHHHHhh---------hccc-----ccCCCHHHHHHHHHHcCCCeEEE
Confidence 00 0001111 2232 34567889999999999987643
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.82 E-value=0.047 Score=52.67 Aligned_cols=175 Identities=10% Similarity=0.051 Sum_probs=89.7
Q ss_pred HHHHHhhc-cCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEE
Q 005237 441 QALLEAFE-GCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFEL 519 (706)
Q Consensus 441 QAILEA~e-G~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF 519 (706)
+.+++.+. ..+...|+|+|.|.|.- ...|+.+. |..++|||+.. +..++.+.+++ +..+ .++|
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~~~v~~vD~s----~~~~~~a~~~~----~~~~-~~~~ 96 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLL----SAFLMEKY---PEATFTLVDMS----EKMLEIAKNRF----RGNL-KVKY 96 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHH----HHHHHHHC---TTCEEEEEESC----HHHHHHHHHHT----CSCT-TEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHH----HHHHHHhC---CCCeEEEEECC----HHHHHHHHHhh----ccCC-CEEE
Confidence 56666665 45668999999999853 34444432 46799999864 22233333332 2233 4555
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe-ecCCCCCCCChHHHHHHHH
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL-DRSCDRPDFPFAHHMVHAL 597 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv-Eqeadhns~~F~~RF~EAL 597 (706)
....++++. +. ..=++|+.+..++.+.. ..+..+|+.+ +.|+|.-++++ +.... +...+......
T Consensus 97 ~~~d~~~~~-------~~-~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~~~-- 163 (234)
T 3dtn_A 97 IEADYSKYD-------FE-EKYDMVVSALSIHHLED--EDKKELYKRSYSILKESGIFINADLVHG-ETAFIENLNKT-- 163 (234)
T ss_dssp EESCTTTCC-------CC-SCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEECBC-SSHHHHHHHHH--
T ss_pred EeCchhccC-------CC-CCceEEEEeCccccCCH--HHHHHHHHHHHHhcCCCcEEEEEEecCC-CChhhhhHHHH--
Confidence 443222221 11 12256777766665421 1223466665 67999887664 43322 22222222222
Q ss_pred HHHHHHhhhhhcCCCChHHHHHHHHHhhhhhHhhhhc-cccCCCCChhhHHHHHHhCCCccccC
Q 005237 598 QSYSGLLESLDSVNVNLDALQKIERFLVYPCIEKIVL-GRHRSPERLPPWRSLFMQSGFAPLTF 660 (706)
Q Consensus 598 ~yYsAlFDSLDa~~~~~d~R~~IEr~llg~eI~nIVa-~R~ERhE~~~~Wr~Rm~rAGF~pvpL 660 (706)
++...+ ........ .+ .+... ....+..+.+.|+..|++|||+.+.+
T Consensus 164 -~~~~~~---~~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 164 -IWRQYV---ENSGLTEE---EI---------AAGYERSKLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp -HHHHHH---HTSSCCHH---HH---------HTTC----CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred -HHHHHH---HhcCCCHH---HH---------HHHHHhcccccccCHHHHHHHHHHcCCCceee
Confidence 122221 11111221 11 11111 13456667899999999999998765
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.18 E-value=0.46 Score=46.64 Aligned_cols=109 Identities=15% Similarity=0.119 Sum_probs=61.6
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELE 520 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~ 520 (706)
.|++.+.-...-+|+|+|.|.|. +...|+.+. + ++|+|+.. +..++.+.+ .++..|++ ++|.
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s----~~~l~~a~~----~~~~~~~~~v~~~ 90 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLT----EDILKVARA----FIEGNGHQQVEYV 90 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESC----HHHHHHHHH----HHHHTTCCSEEEE
T ss_pred HHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCC----HHHHHHHHH----HHHhcCCCceEEE
Confidence 45555554556689999999875 455666553 2 99999864 223433333 34445654 5555
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
...++++ .+.-..=++|+.+..++.+. ..+.+|+.+ |.|+|.-.+++
T Consensus 91 ~~d~~~l-------~~~~~~fD~V~~~~~l~~~~----d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 91 QGDAEQM-------PFTDERFHIVTCRIAAHHFP----NPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp ECCC-CC-------CSCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred EecHHhC-------CCCCCCEEEEEEhhhhHhcC----CHHHHHHHHHHHcCCCCEEEE
Confidence 4322222 12111225677776665442 244666554 78899877665
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=94.69 E-value=0.87 Score=43.10 Aligned_cols=113 Identities=14% Similarity=0.147 Sum_probs=65.0
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FEL 519 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF 519 (706)
..|++.+.-.+.-.|+|+|.|.|.--..|.+.. .|..++|+|+.. +..++.+.+++ +..+++ ++|
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s----~~~~~~a~~~~----~~~~~~~~~~ 92 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQ----EEMVNYAWEKV----NKLGLKNVEV 92 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESC----HHHHHHHHHHH----HHHTCTTEEE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECC----HHHHHHHHHHH----HHcCCCcEEE
Confidence 567777765566789999999986444444433 345699999854 22344444443 344554 555
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
....++++. +....=++|+.+..++.+. ....+|+.+ +.|+|..++++
T Consensus 93 ~~~d~~~~~-------~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 93 LKSEENKIP-------LPDNTVDFIFMAFTFHELS----EPLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EECBTTBCS-------SCSSCEEEEEEESCGGGCS----SHHHHHHHHHHHEEEEEEEEE
T ss_pred EecccccCC-------CCCCCeeEEEeehhhhhcC----CHHHHHHHHHHHhCCCeEEEE
Confidence 543332221 1111125666666665442 245666665 67999876665
No 5
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.32 E-value=0.84 Score=46.47 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=66.6
Q ss_pred HHHHHhhcc--CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--
Q 005237 441 QALLEAFEG--CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-- 516 (706)
Q Consensus 441 QAILEA~eG--~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-- 516 (706)
..|++.+.- .+..+|+|+|.|.|. +...|+.+. |..++|+++.+ ..++.+.+++. ..|+.
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~~----~~~~~~~ 216 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-----SVLEVAKENAR----IQGVASR 216 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-----HHHHHHHHHHH----HHTCGGG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-----HHHHHHHHHHH----hcCCCcc
Confidence 467777765 677899999999985 444555443 45799999853 13444444443 33553
Q ss_pred EEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcE-EEEeecCC
Q 005237 517 FELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKI-VVSLDRSC 582 (706)
Q Consensus 517 FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkV-VVlvEqea 582 (706)
++|....+.+. .+. ..-++|+.+..++.+.. .....+|+.+ +.|+|.- ++++|...
T Consensus 217 v~~~~~d~~~~-------~~~-~~~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 217 YHTIAGSAFEV-------DYG-NDYDLVLLPNFLHHFDV--ATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp EEEEESCTTTS-------CCC-SCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred eEEEecccccC-------CCC-CCCcEEEEcchhccCCH--HHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 66655332211 111 01256666655554321 1234667665 5689988 55566543
No 6
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=94.21 E-value=0.5 Score=47.65 Aligned_cols=117 Identities=13% Similarity=0.094 Sum_probs=61.7
Q ss_pred CceeEEEecccccccchHHHHHHHhcCCCCCCcE--EEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccc
Q 005237 450 CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSL--KITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETL 527 (706)
Q Consensus 450 ~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsL--RITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL 527 (706)
....+|+|+|.|-|.--..++..|+.+. |.. .+|+|+.+ +.-++.+.+++.+...--++.|+|.....+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~---~~~~v~~~~vD~S----~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~ 123 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQY---PGVCINNEVVEPS----AEQIAKYKELVAKTSNLENVKFAWHKETSSEY 123 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHS---TTCEEEEEEECSC----HHHHHHHHHHHHTCSSCTTEEEEEECSCHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhC---CCceeeEEEEeCC----HHHHHHHHHHHHhccCCCcceEEEEecchhhh
Confidence 4567999999999954445677776543 234 45999864 12244444443211000134566554433333
Q ss_pred cccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 528 ISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 528 ~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
.. .|...+.-..=++|..+..++.+.+ .+.+|+.+ |-|+|.-.+++
T Consensus 124 ~~-~~~~~~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 124 QS-RMLEKKELQKWDFIHMIQMLYYVKD----IPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HH-HHHTTTCCCCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEE
T ss_pred hh-hhccccCCCceeEEEEeeeeeecCC----HHHHHHHHHHHcCCCcEEEE
Confidence 21 0000011011256777766665532 56677776 55799976654
No 7
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=93.70 E-value=1.9 Score=41.81 Aligned_cols=110 Identities=14% Similarity=0.108 Sum_probs=61.4
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FEL 519 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF 519 (706)
.-+++.+.-.+.-+|+|+|.|.|. +...|+.+. + ++|+|+.. +..++.+.++ ++..|++ ++|
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s----~~~~~~a~~~----~~~~~~~~v~~ 73 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDAT----KEMVEVASSF----AQEKGVENVRF 73 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESC----HHHHHHHHHH----HHHHTCCSEEE
T ss_pred chHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECC----HHHHHHHHHH----HHHcCCCCeEE
Confidence 345566666666789999999886 445566542 2 89999854 2234433333 3344554 555
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
....++++. +....=++|+.+..++.+. ....+|+.+ +-|+|.-.+++
T Consensus 74 ~~~d~~~~~-------~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 74 QQGTAESLP-------FPDDSFDIITCRYAAHHFS----DVRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp EECBTTBCC-------SCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred EecccccCC-------CCCCcEEEEEECCchhhcc----CHHHHHHHHHHHcCCCcEEEE
Confidence 543332221 1111124666665555442 245666655 67899877665
No 8
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=93.65 E-value=1 Score=44.35 Aligned_cols=104 Identities=15% Similarity=0.130 Sum_probs=58.2
Q ss_pred CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEEEeeccccc
Q 005237 450 CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELEILSLETLI 528 (706)
Q Consensus 450 ~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~~V~lesL~ 528 (706)
.+.-+|+|+|.|.|. +...|+.+. |..++|+|+.. +..++.+ .+.++..+++ .+|....+.++.
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s----~~~~~~a----~~~~~~~~~~~~~~~~~d~~~~~ 100 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDIS----PESLEKA----RENTEKNGIKNVKFLQANIFSLP 100 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESC----HHHHHHH----HHHHHHTTCCSEEEEECCGGGCC
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECC----HHHHHHH----HHHHHHcCCCCcEEEEcccccCC
Confidence 345689999999884 344555442 34699999854 2223333 3334455653 555443322221
Q ss_pred ccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 529 SASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 529 ~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
+....=++|+.+..++.+. ..+.+|+.+ +.|+|.-++++.
T Consensus 101 -------~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 101 -------FEDSSFDHIFVCFVLEHLQ----SPEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp -------SCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CCCCCeeEEEEechhhhcC----CHHHHHHHHHHHcCCCcEEEEE
Confidence 1111225677776665442 245667665 679998776653
No 9
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=93.26 E-value=1.1 Score=46.68 Aligned_cols=116 Identities=16% Similarity=0.088 Sum_probs=68.5
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-- 516 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-- 516 (706)
....|++.+.-.+.-+|+|+|.|.|.- ...|+.+. |.+++|+++.+ .-++.+.+++. ..|++
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~~----~~~~~~~ 241 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDI----SAAMLKHF---PELDSTILNLP-----GAIDLVNENAA----EKGVADR 241 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHH----HHHHHHHC---TTCEEEEEECG-----GGHHHHHHHHH----HTTCTTT
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHH----HHHHHHHC---CCCeEEEEecH-----HHHHHHHHHHH----hcCCCCC
Confidence 346788887656677999999999863 34444432 46899999863 23555555443 34543
Q ss_pred EEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEE-EeecC
Q 005237 517 FELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVV-SLDRS 581 (706)
Q Consensus 517 FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVV-lvEqe 581 (706)
++|..-.+.+. .+ .+.++|+.+..++.+.. .....+|+.+ +.|+|.-.+ ++|..
T Consensus 242 v~~~~~d~~~~-------~~--~~~D~v~~~~vlh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 242 MRGIAVDIYKE-------SY--PEADAVLFCRILYSANE--QLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp EEEEECCTTTS-------CC--CCCSEEEEESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred EEEEeCccccC-------CC--CCCCEEEEechhccCCH--HHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 66655322211 11 23367777776664421 1245677776 578998655 55643
No 10
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.23 E-value=1.1 Score=47.12 Aligned_cols=116 Identities=13% Similarity=0.087 Sum_probs=64.3
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFEL 519 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFEF 519 (706)
.+++.+...+.-+|+|+|.|.|. +...|+++. |.+++|+++.| .-++.+.+ .++..|+ .++|
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~----~~~~~~~~~~v~~ 233 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDLP-----QQLEMMRK----QTAGLSGSERIHG 233 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEECH-----HHHHHHHH----HHTTCTTGGGEEE
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeCH-----HHHHHHHH----HHHhcCcccceEE
Confidence 34555444556799999999985 344555442 46799999853 12333333 3444565 3666
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE-eecC
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS-LDRS 581 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl-vEqe 581 (706)
..-.+.+.. +.+. ..-++|+.+..+|.+.. .....+|+.+ +.|+|.-.++ +|.-
T Consensus 234 ~~~d~~~~~-----~~~p-~~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 234 HGANLLDRD-----VPFP-TGFDAVWMSQFLDCFSE--EEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp EECCCCSSS-----CCCC-CCCSEEEEESCSTTSCH--HHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred EEccccccC-----CCCC-CCcCEEEEechhhhCCH--HHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 553222110 0011 13357777766654322 1234677776 5689987654 5543
No 11
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=93.02 E-value=0.85 Score=43.22 Aligned_cols=110 Identities=12% Similarity=0.147 Sum_probs=60.5
Q ss_pred HHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEE
Q 005237 440 NQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFEL 519 (706)
Q Consensus 440 NQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF 519 (706)
-..+++.+...+.-.|+|+|.|.|. +...|+.+ ..++|||+.. +..++.+.+++. -..+|
T Consensus 34 ~~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s----~~~~~~a~~~~~-------~~~~~ 93 (220)
T 3hnr_A 34 YEDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA-----GRTVYGIEPS----REMRMIAKEKLP-------KEFSI 93 (220)
T ss_dssp HHHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT-----TCEEEEECSC----HHHHHHHHHHSC-------TTCCE
T ss_pred HHHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC-----CCeEEEEeCC----HHHHHHHHHhCC-------CceEE
Confidence 3566777766667799999999984 55566655 2489999854 222333333221 12333
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
....+.++. +. ..=++|+.+..++.+.. .....+|+.+ +.|+|..++++.
T Consensus 94 ~~~d~~~~~-------~~-~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 94 TEGDFLSFE-------VP-TSIDTIVSTYAFHHLTD--DEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp ESCCSSSCC-------CC-SCCSEEEEESCGGGSCH--HHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EeCChhhcC-------CC-CCeEEEEECcchhcCCh--HHHHHHHHHHHHhcCCCCEEEEE
Confidence 332222211 11 23357777766654422 1112256555 678998766653
No 12
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=92.40 E-value=1.6 Score=44.95 Aligned_cols=116 Identities=15% Similarity=0.134 Sum_probs=66.2
Q ss_pred HHHHhhccCc-eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EE
Q 005237 442 ALLEAFEGCN-RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FE 518 (706)
Q Consensus 442 AILEA~eG~~-rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FE 518 (706)
.|++.+.-.+ ..+|+|+|.|.|. +...|+.+. |.+++|+++.+. .++.+.++ ++..++. ++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-----~~~~a~~~----~~~~~~~~~v~ 232 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLPT-----TRDAARKT----IHAHDLGGRVE 232 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECGG-----GHHHHHHH----HHHTTCGGGEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECHH-----HHHHHHHH----HHhcCCCCceE
Confidence 6777776555 7899999999986 445555443 458999998641 24444443 3444553 66
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE-eecC
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS-LDRS 581 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl-vEqe 581 (706)
|..-.+.+.... + ...-++|+.+..+|.+.. .....+|+.+ +.|+|.-.++ +|.-
T Consensus 233 ~~~~d~~~~~~~-----~-~~~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 233 FFEKNLLDARNF-----E-GGAADVVMLNDCLHYFDA--REAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp EEECCTTCGGGG-----T-TCCEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEeCCcccCccc-----C-CCCccEEEEecccccCCH--HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 655433221100 1 111256666666654421 1245677776 6789987654 4543
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=92.25 E-value=3.4 Score=39.90 Aligned_cols=130 Identities=12% Similarity=0.088 Sum_probs=67.7
Q ss_pred HHHHHhhCCccchhHHHHHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHH
Q 005237 422 YKSFSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGF 501 (706)
Q Consensus 422 yk~f~e~sP~lkFAhftANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~ 501 (706)
|..++. ..++.-........|++.+.-.+.-+|+|+|.|.|.- ...|+.+.+ .++|||+.. +..++.
T Consensus 27 y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~----~~~l~~~~~----~~v~~vD~s----~~~~~~ 93 (266)
T 3ujc_A 27 YEFIFG-ENYISSGGLEATKKILSDIELNENSKVLDIGSGLGGG----CMYINEKYG----AHTHGIDIC----SNIVNM 93 (266)
T ss_dssp HHHHHC-TTCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHH----HHHHHHHHC----CEEEEEESC----HHHHHH
T ss_pred HHHHhC-CCccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHH----HHHHHHHcC----CEEEEEeCC----HHHHHH
Confidence 444442 3344444455567777777666677999999998753 334443322 489999864 212322
Q ss_pred HHHHHHHHHHhcCCcEEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 502 TQENLKHFASEINIPFELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 502 tg~rL~~fA~~lgVpFEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
+.+++... -..+|....+.++ .+....=++|+.+..++.+.. .....+|+.+ +.|+|...+++
T Consensus 94 a~~~~~~~-----~~~~~~~~d~~~~-------~~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 94 ANERVSGN-----NKIIFEANDILTK-------EFPENNFDLIYSRDAILALSL--ENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp HHHTCCSC-----TTEEEEECCTTTC-------CCCTTCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHhhcC-----CCeEEEECccccC-------CCCCCcEEEEeHHHHHHhcCh--HHHHHHHHHHHHHcCCCCEEEE
Confidence 22221111 3455544322222 111112246666666654411 2345666665 67899876654
No 14
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=92.01 E-value=0.51 Score=49.60 Aligned_cols=117 Identities=16% Similarity=0.216 Sum_probs=65.7
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEE
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFE 518 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFE 518 (706)
....|++++.-...-+|||+|-|.|. ++.+|+++. |.+|+|.++.|. -++.+.+++. ....=..+
T Consensus 167 ~~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp~-----v~~~a~~~~~---~~~~~rv~ 231 (353)
T 4a6d_A 167 NGRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIPE-----VVWTAKQHFS---FQEEEQID 231 (353)
T ss_dssp HHHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECHH-----HHHHHHHHSC---C--CCSEE
T ss_pred HHHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCHH-----HHHHHHHhhh---hcccCcee
Confidence 35678888765555689999999985 556666554 578999998651 2333333321 11111245
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcE-EEEeecC
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKI-VVSLDRS 581 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkV-VVlvEqe 581 (706)
|..-.+ ++. .. ...+++.....+|.... .....+|+.+ +.|+|.- ++++|.-
T Consensus 232 ~~~gD~--~~~-----~~--~~~D~~~~~~vlh~~~d--~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 232 FQEGDF--FKD-----PL--PEADLYILARVLHDWAD--GKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp EEESCT--TTS-----CC--CCCSEEEEESSGGGSCH--HHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred eecCcc--ccC-----CC--CCceEEEeeeecccCCH--HHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 544211 211 11 23467777666664322 1234677777 5799986 4455653
No 15
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=91.68 E-value=2.3 Score=44.16 Aligned_cols=113 Identities=19% Similarity=0.251 Sum_probs=65.0
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FE 518 (706)
..|++.+.-.+..+|+|+|.|.| .+...|+.+. |.+++|+++.+ ..++.+.+++ +..|+. ++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~~-----~~~~~a~~~~----~~~~~~~~v~ 235 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVELA-----GPAERARRRF----ADAGLADRVT 235 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH-----HHHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeCH-----HHHHHHHHHH----HhcCCCCceE
Confidence 56777766556679999999999 3445555443 47899999852 2344444444 344553 66
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEE-Eeec
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVV-SLDR 580 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVV-lvEq 580 (706)
|....+. +. +.. .-++|+.+..++.+.. .....+|+.+ +.|+|.-.+ ++|.
T Consensus 236 ~~~~d~~--~~------~~~-~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 236 VAEGDFF--KP------LPV-TADVVLLSFVLLNWSD--EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEECCTT--SC------CSC-CEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeCCCC--Cc------CCC-CCCEEEEeccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 6553221 11 110 1356666666654322 1123566666 678998744 4565
No 16
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=91.58 E-value=1.5 Score=43.71 Aligned_cols=111 Identities=12% Similarity=0.192 Sum_probs=66.4
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELE 520 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~ 520 (706)
..|++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+.. +..++. ..+.++..|+..+|.
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s----~~~~~~----a~~~~~~~~~~~~~~ 172 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHN----ENSIAF----LNETKEKENLNISTA 172 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESC----HHHHHH----HHHHHHHTTCCEEEE
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECC----HHHHHH----HHHHHHHcCCceEEE
Confidence 355566655566789999999986 44556655 2 389999864 223433 334455567766666
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
...+.++. + ...=++|+.|..++.+.. ..+..+|+.+ +.|+|.-++++
T Consensus 173 ~~d~~~~~-------~-~~~fD~i~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 173 LYDINAAN-------I-QENYDFIVSTVVFMFLNR--ERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp ECCGGGCC-------C-CSCEEEEEECSSGGGSCG--GGHHHHHHHHHHTEEEEEEEEE
T ss_pred Eecccccc-------c-cCCccEEEEccchhhCCH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 54333221 1 112257777776664422 3456777766 67899887544
No 17
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=90.86 E-value=2.4 Score=39.48 Aligned_cols=113 Identities=12% Similarity=0.137 Sum_probs=66.6
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-- 516 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-- 516 (706)
....|++.+.-... +|+|+|.|.|. +...|+.+ |..++|+|+.. +..++.+.+ .++..++.
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s----~~~~~~a~~----~~~~~~~~~~ 94 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFS----KHMNEIALK----NIADANLNDR 94 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESC----HHHHHHHHH----HHHHTTCTTT
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECC----HHHHHHHHH----HHHhccccCc
Confidence 34566666665555 99999999985 45555555 35899999853 223443333 34455653
Q ss_pred EEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 517 FELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 517 FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
++|....++++. +....=++|+.+..++.+ .....+|+.+ +.|+|.-.+++.
T Consensus 95 ~~~~~~d~~~~~-------~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 95 IQIVQGDVHNIP-------IEDNYADLIVSRGSVFFW----EDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EEEEECBTTBCS-------SCTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCHHHCC-------CCcccccEEEECchHhhc----cCHHHHHHHHHHhCCCCCEEEEE
Confidence 666554333221 111122567777666544 2345666665 678998877664
No 18
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=90.61 E-value=2.2 Score=43.56 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=64.5
Q ss_pred HHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEE
Q 005237 440 NQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFEL 519 (706)
Q Consensus 440 NQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF 519 (706)
...|++.+.-.+ .+|+|+|.|.|. +...|+.+. |.+++|+++.+. -++.+.+++.+.. +.-.++|
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-----~~~~a~~~~~~~~--~~~~v~~ 221 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDREG-----SLGVARDNLSSLL--AGERVSL 221 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECTT-----CTHHHHHHTHHHH--HTTSEEE
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCcHH-----HHHHHHHHHhhcC--CCCcEEE
Confidence 356777664334 899999999985 444555443 457999999732 2444555554332 1113555
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE-eecC
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS-LDRS 581 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl-vEqe 581 (706)
..-.+. ++ +. ..-++|+.+..+|.+.. .....+|+.+ +.|+|.-.++ +|..
T Consensus 222 ~~~d~~--~~------~~-~~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 222 VGGDML--QE------VP-SNGDIYLLSRIIGDLDE--AASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp EESCTT--TC------CC-SSCSEEEEESCGGGCCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred ecCCCC--CC------CC-CCCCEEEEchhccCCCH--HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 543221 11 11 12357777766654422 1234677776 5789987554 4543
No 19
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=90.40 E-value=1.8 Score=41.12 Aligned_cols=117 Identities=17% Similarity=0.127 Sum_probs=65.4
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-----
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI----- 515 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV----- 515 (706)
+.|++.+...+.-.|+|+|.|.|. +...|+.+. |..++|||+.. +..++.+.+++ +..++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s----~~~~~~a~~~~----~~~~~~~~~~ 83 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVS----YSVLERAKDRL----KIDRLPEMQR 83 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESC----HHHHHHHHHHH----TGGGSCHHHH
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECC----HHHHHHHHHHH----HhhccccccC
Confidence 445555554555689999999986 455666543 35799999864 22344444443 22233
Q ss_pred -cEEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeecC
Q 005237 516 -PFELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDRS 581 (706)
Q Consensus 516 -pFEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEqe 581 (706)
.++|..-.++.+. .....=++|+.+..++.+.. ..+..+|+.+ +.|+|..++++...
T Consensus 84 ~~v~~~~~d~~~~~-------~~~~~fD~V~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 84 KRISLFQSSLVYRD-------KRFSGYDAATVIEVIEHLDE--NRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp TTEEEEECCSSSCC-------GGGTTCSEEEEESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cceEEEeCcccccc-------cccCCCCEEEEHHHHHhCCH--HHHHHHHHHHHHhhCCCEEEEEccc
Confidence 3555443222111 11112357776766654421 1234666665 67899987776554
No 20
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=90.30 E-value=1.8 Score=44.35 Aligned_cols=111 Identities=13% Similarity=0.118 Sum_probs=62.9
Q ss_pred HHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEEEE
Q 005237 443 LLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFELE 520 (706)
Q Consensus 443 ILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFEF~ 520 (706)
|++.+.-.+..+|+|+|.|.| .+...|+.+. |.+++|+++.+ .-++.+.+++ +..++ ..+|.
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~----~~~~~~~~v~~~ 224 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDLQ-----GPASAAHRRF----LDTGLSGRAQVV 224 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH-----HHHHHHHHHH----HHTTCTTTEEEE
T ss_pred HHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecCH-----HHHHHHHHhh----hhcCcCcCeEEe
Confidence 444444345679999999999 4445555443 46799999753 2344444444 34454 36666
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE-eec
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS-LDR 580 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl-vEq 580 (706)
...+. ++ ++ . .-+++..+..+|.+.. .....+|+.+ +.|+|.-.++ +|.
T Consensus 225 ~~d~~--~~--~p--~---~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 225 VGSFF--DP--LP--A---GAGGYVLSAVLHDWDD--LSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp ECCTT--SC--CC--C---SCSEEEEESCGGGSCH--HHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCCC--CC--CC--C---CCcEEEEehhhccCCH--HHHHHHHHHHHHhcCCCCEEEEEee
Confidence 54321 11 11 1 2356766666654422 1245677776 6789987654 454
No 21
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=90.19 E-value=3.4 Score=43.58 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=65.5
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc-C----CcEEEEEeecc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI-N----IPFELEILSLE 525 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l-g----VpFEF~~V~le 525 (706)
+.-+|+|+|.|.|.--..|.+.+ .|..++|||+.. +..++.+.+++.+.+..+ | -..+|..-.++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~s----~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~ 152 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDML----DNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIE 152 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEECC----HHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTT
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEECC----HHHHHHHHHHHHHhhhhcccccCCCceEEEEccHH
Confidence 34589999999985333333332 124599999964 334677777777776554 4 35666654444
Q ss_pred cccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 526 TLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 526 sL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
++.... ...+.-..=++|+.|..++.+. ....+|+.+ |-|+|.-++++
T Consensus 153 ~l~~~~-~~~~~~~~fD~V~~~~~l~~~~----d~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 153 NLATAE-PEGVPDSSVDIVISNCVCNLST----NKLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp CGGGCB-SCCCCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred Hhhhcc-cCCCCCCCEEEEEEccchhcCC----CHHHHHHHHHHHcCCCCEEEE
Confidence 332110 0012111225777787766542 245666665 68899877665
No 22
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=89.69 E-value=6.1 Score=39.46 Aligned_cols=103 Identities=18% Similarity=0.154 Sum_probs=58.5
Q ss_pred CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccc
Q 005237 450 CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLIS 529 (706)
Q Consensus 450 ~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~ 529 (706)
.+...|+|+|.|.|. +...|+.+- |+..++|||+.. +..+..+ .+.++..+..++|..-.++++
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s----~~~~~~a----~~~~~~~~~~v~~~~~d~~~~-- 84 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSG----ETLLAEA----RELFRLLPYDSEFLEGDATEI-- 84 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESC----HHHHHHH----HHHHHSSSSEEEEEESCTTTC--
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECC----HHHHHHH----HHHHHhcCCceEEEEcchhhc--
Confidence 456789999999983 445555543 224799999854 2223333 333445566566554322221
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
+ +. ..=++|+.+..++.+. ..+.+|+.+ +.|+|.-.+++
T Consensus 85 ---~--~~-~~fD~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~ 124 (284)
T 3gu3_A 85 ---E--LN-DKYDIAICHAFLLHMT----TPETMLQKMIHSVKKGGKIIC 124 (284)
T ss_dssp ---C--CS-SCEEEEEEESCGGGCS----SHHHHHHHHHHTEEEEEEEEE
T ss_pred ---C--cC-CCeeEEEECChhhcCC----CHHHHHHHHHHHcCCCCEEEE
Confidence 1 11 1225676676655442 235666655 78899987764
No 23
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=89.53 E-value=3 Score=39.56 Aligned_cols=116 Identities=22% Similarity=0.197 Sum_probs=64.9
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC------
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI------ 515 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV------ 515 (706)
.|++.+...+.-.|+|+|.|.|. +...|+.+. |..++|||+.. +..++.+.++ ++..++
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s----~~~~~~a~~~----~~~~~~~~~~~~ 84 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVS----YRSLEIAQER----LDRLRLPRNQWE 84 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESC----HHHHHHHHHH----HTTCCCCHHHHT
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECC----HHHHHHHHHH----HHHhcCCcccCc
Confidence 44444444455689999999985 455566543 34699999864 2234444443 333444
Q ss_pred cEEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeecC
Q 005237 516 PFELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDRS 581 (706)
Q Consensus 516 pFEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEqe 581 (706)
.++|..-.++.+. .....=++|+.+..++.+.. ..+..+|+.+ +.|+|..++++...
T Consensus 85 ~v~~~~~d~~~~~-------~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 85 RLQLIQGALTYQD-------KRFHGYDAATVIEVIEHLDL--SRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp TEEEEECCTTSCC-------GGGCSCSEEEEESCGGGCCH--HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred ceEEEeCCccccc-------ccCCCcCEEeeHHHHHcCCH--HHHHHHHHHHHHHcCCCEEEEEccC
Confidence 3555543222111 11112357777766665421 1245677765 56899987776543
No 24
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=89.49 E-value=0.96 Score=47.67 Aligned_cols=108 Identities=17% Similarity=0.166 Sum_probs=60.5
Q ss_pred HHHHHhhcc-CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEE
Q 005237 441 QALLEAFEG-CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFEL 519 (706)
Q Consensus 441 QAILEA~eG-~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF 519 (706)
..|++.+.+ .+.-+|+|+|-|.|. +...|+.+. |.+++|+++.|. -+ +.|+.. -..+|
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-----~~--------~~a~~~-~~v~~ 250 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDLPH-----VI--------QDAPAF-SGVEH 250 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHH-----HH--------TTCCCC-TTEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEehHH-----HH--------Hhhhhc-CCCEE
Confidence 456776653 446799999999986 344455443 578999998631 11 112221 12445
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEE-EeecC
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVV-SLDRS 581 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVV-lvEqe 581 (706)
..-.+ +++ +. ++++++.+..+|.+.. .....+|+.+ +.|+|.-.+ ++|.-
T Consensus 251 ~~~d~--~~~------~p--~~D~v~~~~vlh~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 251 LGGDM--FDG------VP--KGDAIFIKWICHDWSD--EHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EECCT--TTC------CC--CCSEEEEESCGGGBCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EecCC--CCC------CC--CCCEEEEechhhcCCH--HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 44221 111 11 2367777776664432 1234677776 578998754 45543
No 25
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=88.95 E-value=2.3 Score=39.63 Aligned_cols=109 Identities=16% Similarity=0.173 Sum_probs=61.3
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEEEEEeecccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFELEILSLETLIS 529 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFEF~~V~lesL~~ 529 (706)
+.-+|+|+|.|.|.- ...++.+. .-++|+|+.. +..++.+.++ ++..++ ..+|..-.+.++..
T Consensus 44 ~~~~vLDlgcG~G~~----~~~~~~~~----~~~v~~vD~~----~~~~~~a~~~----~~~~~~~~v~~~~~d~~~~~~ 107 (189)
T 3p9n_A 44 TGLAVLDLYAGSGAL----GLEALSRG----AASVLFVESD----QRSAAVIARN----IEALGLSGATLRRGAVAAVVA 107 (189)
T ss_dssp TTCEEEEETCTTCHH----HHHHHHTT----CSEEEEEECC----HHHHHHHHHH----HHHHTCSCEEEEESCHHHHHH
T ss_pred CCCEEEEeCCCcCHH----HHHHHHCC----CCeEEEEECC----HHHHHHHHHH----HHHcCCCceEEEEccHHHHHh
Confidence 345799999998842 22233342 3489999853 2334444444 344455 35555433332211
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHh---cCCcEEEEeecCCC
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQ---LQPKIVVSLDRSCD 583 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRs---L~PkVVVlvEqead 583 (706)
. +....=++|+.|.+++... ...+.+|+.++. |+|.-+++++.+..
T Consensus 108 ~-----~~~~~fD~i~~~~p~~~~~---~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 108 A-----GTTSPVDLVLADPPYNVDS---ADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp H-----CCSSCCSEEEECCCTTSCH---HHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred h-----ccCCCccEEEECCCCCcch---hhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 0 1111235888887765321 235677777764 99999998876543
No 26
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=88.94 E-value=3.6 Score=43.15 Aligned_cols=115 Identities=16% Similarity=0.169 Sum_probs=66.6
Q ss_pred HHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cE
Q 005237 440 NQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PF 517 (706)
Q Consensus 440 NQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pF 517 (706)
...|++.+.-.+..+|+|+|.|.|. +...|+.+. |.+++|+++.+ .-++.+.+++ ...|+ ..
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~~~a~~~~----~~~~l~~~v 254 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLERP-----PVAEEARELL----TGRGLADRC 254 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-----HHHHHHHHHH----HHTTCTTTE
T ss_pred HHHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcCH-----HHHHHHHHhh----hhcCcCCce
Confidence 3567777765667899999999996 445555442 57899999853 2344444443 33454 36
Q ss_pred EEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE-eecC
Q 005237 518 ELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS-LDRS 581 (706)
Q Consensus 518 EF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl-vEqe 581 (706)
+|....+. ++ +.. .-++|+.+..++.+.. .....+|+.+ +.|+|.-.++ +|.-
T Consensus 255 ~~~~~d~~--~~------~p~-~~D~v~~~~vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 255 EILPGDFF--ET------IPD-GADVYLIKHVLHDWDD--DDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp EEEECCTT--TC------CCS-SCSEEEEESCGGGSCH--HHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred EEeccCCC--CC------CCC-CceEEEhhhhhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 66654322 11 111 2357766666654422 1123577776 5789976554 4543
No 27
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=88.89 E-value=4.7 Score=41.56 Aligned_cols=114 Identities=16% Similarity=0.212 Sum_probs=64.2
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFE 518 (706)
..|++.+.-.+..+|+|+|.|.|.- ...|+.+. |.+++|+++.+ ..++.+.+++ +..|+ .++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---~~~~~~~~D~~-----~~~~~a~~~~----~~~~~~~~v~ 236 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGF----AAAIARRA---PHVSATVLEMA-----GTVDTARSYL----KDEGLSDRVD 236 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEECT-----THHHHHHHHH----HHTTCTTTEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHH----HHHHHHhC---CCCEEEEecCH-----HHHHHHHHHH----HhcCCCCceE
Confidence 5677777655667999999999853 34444432 46899999852 1344444444 34455 366
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE-eecC
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS-LDRS 581 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl-vEqe 581 (706)
|..-.+ .+. +.. .-++++.+..++.+.. .....+|+.+ +.|+|.-.++ +|..
T Consensus 237 ~~~~d~--~~~------~~~-~~D~v~~~~vl~~~~~--~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 237 VVEGDF--FEP------LPR-KADAIILSFVLLNWPD--HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEECCT--TSC------CSS-CEEEEEEESCGGGSCH--HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEeCCC--CCC------CCC-CccEEEEcccccCCCH--HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 655322 111 110 1246666665554321 1123567666 5689987554 5543
No 28
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=88.88 E-value=5 Score=40.63 Aligned_cols=110 Identities=13% Similarity=0.013 Sum_probs=62.5
Q ss_pred HHHHHhhc-cCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--E
Q 005237 441 QALLEAFE-GCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--F 517 (706)
Q Consensus 441 QAILEA~e-G~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--F 517 (706)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+.. +..++ ...+.++..|+. .
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s----~~~~~----~a~~~~~~~~~~~~v 169 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTLS----AAQAD----FGNRRARELRIDDHV 169 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESC----HHHHH----HHHHHHHHTTCTTTE
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeCC----HHHHH----HHHHHHHHcCCCCce
Confidence 45667665 3445689999998874 3344444422 489999854 22333 333445566765 6
Q ss_pred EEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 518 ELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 518 EF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
+|..-.++++. +....=++|+.+..++.+ . ...+|+.+ +.|+|.-.+++
T Consensus 170 ~~~~~d~~~~~-------~~~~~fD~V~~~~~l~~~-~----~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 170 RSRVCNMLDTP-------FDKGAVTASWNNESTMYV-D----LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEEECCTTSCC-------CCTTCEEEEEEESCGGGS-C----HHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECChhcCC-------CCCCCEeEEEECCchhhC-C----HHHHHHHHHHHcCCCcEEEE
Confidence 66654333221 111122466666555544 2 56666665 67899876654
No 29
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=88.37 E-value=2.1 Score=51.26 Aligned_cols=121 Identities=15% Similarity=0.077 Sum_probs=70.6
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHH--HHhcCCc-EE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHF--ASEINIP-FE 518 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~f--A~~lgVp-FE 518 (706)
.|++.+...+.-.|+|+|.|.|. +...|+.+ ++|.-+||||+.. +..++.+.++|... +++.|++ .+
T Consensus 712 ~LLelL~~~~g~rVLDVGCGTG~----lai~LAr~--g~p~a~VtGVDIS----~emLe~AReRLa~~lnAkr~gl~nVe 781 (950)
T 3htx_A 712 YALKHIRESSASTLVDFGCGSGS----LLDSLLDY--PTSLQTIIGVDIS----PKGLARAAKMLHVKLNKEACNVKSAT 781 (950)
T ss_dssp HHHHHHHHSCCSEEEEETCSSSH----HHHHHTSS--CCCCCEEEEEESC----HHHHHHHHHHHHHHTTTTCSSCSEEE
T ss_pred HHHHHhcccCCCEEEEECCCCCH----HHHHHHHh--CCCCCeEEEEECC----HHHHHHHHHHhhhccchhhcCCCceE
Confidence 34455544455679999999984 45566644 3456799999964 33467777777654 2234554 44
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHH-HHhcCCcEEEEeecC
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRF-VKQLQPKIVVSLDRS 581 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~-IRsL~PkVVVlvEqe 581 (706)
|..-.+.++. +....=++|+.+..++.+.. ..+..+|+. .+.|+|.++++...+
T Consensus 782 fiqGDa~dLp-------~~d~sFDlVV~~eVLeHL~d--p~l~~~L~eI~RvLKPG~LIISTPN 836 (950)
T 3htx_A 782 LYDGSILEFD-------SRLHDVDIGTCLEVIEHMEE--DQACEFGEKVLSLFHPKLLIVSTPN 836 (950)
T ss_dssp EEESCTTSCC-------TTSCSCCEEEEESCGGGSCH--HHHHHHHHHHHHTTCCSEEEEEECB
T ss_pred EEECchHhCC-------cccCCeeEEEEeCchhhCCh--HHHHHHHHHHHHHcCCCEEEEEecC
Confidence 4432222221 22123357777776665432 123346655 588999966666654
No 30
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=88.19 E-value=1.3 Score=46.69 Aligned_cols=108 Identities=15% Similarity=0.158 Sum_probs=60.5
Q ss_pred HHHHHhhcc-CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEE
Q 005237 441 QALLEAFEG-CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFEL 519 (706)
Q Consensus 441 QAILEA~eG-~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF 519 (706)
..|++.+.+ ...-+|+|+|-|.|.- ...|+++. |.+++|+++.|. -+ +.|+.. -..+|
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~-----~~--------~~a~~~-~~v~~ 248 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGAT----VAAIAAHY---PTIKGVNFDLPH-----VI--------SEAPQF-PGVTH 248 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEECHH-----HH--------TTCCCC-TTEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHH----HHHHHHHC---CCCeEEEecCHH-----HH--------Hhhhhc-CCeEE
Confidence 457777663 4567999999999864 44444433 567999998641 11 112221 13455
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEE-EeecC
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVV-SLDRS 581 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVV-lvEqe 581 (706)
..-.+ +++ +. +++++.....+|.+.. .....+|+.+ +.|+|.-.+ ++|.-
T Consensus 249 ~~~D~--~~~------~p--~~D~v~~~~vlh~~~d--~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 249 VGGDM--FKE------VP--SGDTILMKWILHDWSD--QHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EECCT--TTC------CC--CCSEEEEESCGGGSCH--HHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EeCCc--CCC------CC--CCCEEEehHHhccCCH--HHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 44322 111 11 2367777766664422 2244677777 568998755 45543
No 31
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=88.01 E-value=7.6 Score=38.06 Aligned_cols=126 Identities=15% Similarity=0.014 Sum_probs=71.1
Q ss_pred HHhhCCccchhHHHHHHHHHHhhc-cCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHH
Q 005237 425 FSEISPILQFANFTCNQALLEAFE-GCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQ 503 (706)
Q Consensus 425 f~e~sP~lkFAhftANQAILEA~e-G~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg 503 (706)
+|+..+...-.+......+++.+. -.+.-+|+|+|.|.|. +...|+.+ +..++|||+.. +..++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~----~~~~v~gvD~s----~~~~~--- 83 (267)
T 3kkz_A 19 FFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGH----VTGQVTGLDFL----SGFID--- 83 (267)
T ss_dssp HHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTT----CSSEEEEEESC----HHHHH---
T ss_pred HHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhc----cCCEEEEEeCC----HHHHH---
Confidence 334333333333444455566655 2345689999988874 55667766 35699999864 22333
Q ss_pred HHHHHHHHhcCCc--EEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 504 ENLKHFASEINIP--FELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 504 ~rL~~fA~~lgVp--FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
...+.++..|++ .+|....++++. +....=++|+.+..++.+ ..+.+|+.+ +.|+|.-++++
T Consensus 84 -~a~~~~~~~~~~~~v~~~~~d~~~~~-------~~~~~fD~i~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 84 -IFNRNARQSGLQNRVTGIVGSMDDLP-------FRNEELDLIWSEGAIYNI-----GFERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp -HHHHHHHHTTCTTTEEEEECCTTSCC-------CCTTCEEEEEESSCGGGT-----CHHHHHHHHGGGEEEEEEEEE
T ss_pred -HHHHHHHHcCCCcCcEEEEcChhhCC-------CCCCCEEEEEEcCCceec-----CHHHHHHHHHHHcCCCCEEEE
Confidence 333445566775 666654333221 111122566666666544 245666665 67999876654
No 32
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=87.90 E-value=5 Score=36.93 Aligned_cols=111 Identities=14% Similarity=0.178 Sum_probs=62.5
Q ss_pred HHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEE
Q 005237 440 NQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFE 518 (706)
Q Consensus 440 NQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFE 518 (706)
++.|++.+.-.+.-+|+|+|.|.|. +...|+.+ + .++|+|+.. +..++.+.++ ++..++ .++
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s----~~~~~~a~~~----~~~~~~~~~~ 83 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKN----AMSIANVERI----KSIENLDNLH 83 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESC----HHHHHHHHHH----HHHHTCTTEE
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECC----HHHHHHHHHH----HHhCCCCCcE
Confidence 3466666665455599999999886 34455655 2 389999854 2234444333 333455 455
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS 577 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl 577 (706)
|....+.++. + ...=++|+.+..++.+. +.....+|+.+ +.|+|.-.++
T Consensus 84 ~~~~d~~~~~-------~-~~~~D~v~~~~~l~~~~--~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 84 TRVVDLNNLT-------F-DRQYDFILSTVVLMFLE--AKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp EEECCGGGCC-------C-CCCEEEEEEESCGGGSC--GGGHHHHHHHHHHTEEEEEEEE
T ss_pred EEEcchhhCC-------C-CCCceEEEEcchhhhCC--HHHHHHHHHHHHHhcCCCeEEE
Confidence 5543322221 1 11225666666655442 12456677766 6789987644
No 33
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=87.19 E-value=4.1 Score=39.04 Aligned_cols=111 Identities=11% Similarity=-0.002 Sum_probs=57.1
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeecccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLIS 529 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~~ 529 (706)
.-+|+|+|.+.|.-= ..||.+- ++.-+||+|+.. +..++.+.++ ++..|+. ++|..-...++.+
T Consensus 59 ~~~vLdiG~G~G~~~----~~la~~~--~~~~~v~~vD~~----~~~~~~a~~~----~~~~~~~~~v~~~~~d~~~~l~ 124 (221)
T 3u81_A 59 PSLVLELGAYCGYSA----VRMARLL--QPGARLLTMEIN----PDCAAITQQM----LNFAGLQDKVTILNGASQDLIP 124 (221)
T ss_dssp CSEEEEECCTTSHHH----HHHHTTS--CTTCEEEEEESC----HHHHHHHHHH----HHHHTCGGGEEEEESCHHHHGG
T ss_pred CCEEEEECCCCCHHH----HHHHHhC--CCCCEEEEEeCC----hHHHHHHHHH----HHHcCCCCceEEEECCHHHHHH
Confidence 357999999888632 2334321 234699999853 2234444444 4445654 6654432212111
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEeecC
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLDRS 581 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvEqe 581 (706)
. .........=+.|.++...+... ....++..++.|+|.-+++++.-
T Consensus 125 ~-~~~~~~~~~fD~V~~d~~~~~~~----~~~~~~~~~~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 125 Q-LKKKYDVDTLDMVFLDHWKDRYL----PDTLLLEKCGLLRKGTVLLADNV 171 (221)
T ss_dssp G-TTTTSCCCCCSEEEECSCGGGHH----HHHHHHHHTTCCCTTCEEEESCC
T ss_pred H-HHHhcCCCceEEEEEcCCcccch----HHHHHHHhccccCCCeEEEEeCC
Confidence 0 00000001235777765433211 12245655689999999988643
No 34
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=86.94 E-value=8.1 Score=38.19 Aligned_cols=110 Identities=14% Similarity=0.145 Sum_probs=60.6
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFE 518 (706)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|||+.. +..++.+.++ ++..|+ ..+
T Consensus 54 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~s----~~~~~~a~~~----~~~~~~~~~~~ 117 (287)
T 1kpg_A 54 DLALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTLS----KNQANHVQQL----VANSENLRSKR 117 (287)
T ss_dssp HHHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESC----HHHHHHHHHH----HHTCCCCSCEE
T ss_pred HHHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEECC----HHHHHHHHHH----HHhcCCCCCeE
Confidence 345565554556789999988875 4445553332 299999854 2223333333 344555 345
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
|....++++. ..=++|+.+..++.+.. .....+|+.+ +.|+|.-.+++
T Consensus 118 ~~~~d~~~~~----------~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 118 VLLAGWEQFD----------EPVDRIVSIGAFEHFGH--ERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp EEESCGGGCC----------CCCSEEEEESCGGGTCT--TTHHHHHHHHHHHSCTTCEEEE
T ss_pred EEECChhhCC----------CCeeEEEEeCchhhcCh--HHHHHHHHHHHHhcCCCCEEEE
Confidence 5443222221 12246666655554421 2356677665 67899876654
No 35
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=86.90 E-value=2.2 Score=40.35 Aligned_cols=102 Identities=16% Similarity=0.215 Sum_probs=54.7
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC------cEEEEEeecc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI------PFELEILSLE 525 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV------pFEF~~V~le 525 (706)
.-.|+|+|.|.|. +...|+.+ ..++|+|+.. +..++ ...+.++..++ .++|....++
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~-----~~~v~~vD~s----~~~~~----~a~~~~~~~~~~~~~~~~~~~~~~d~~ 93 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK-----GYSVTGIDIN----SEAIR----LAETAARSPGLNQKTGGKAEFKVENAS 93 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-----TCEEEEEESC----HHHHH----HHHHHTTCCSCCSSSSCEEEEEECCTT
T ss_pred CCeEEEECCCCCH----HHHHHHhC-----CCeEEEEECC----HHHHH----HHHHHHHhcCCccccCcceEEEEeccc
Confidence 3479999999885 44455555 2489999854 22232 33334444555 3455443222
Q ss_pred cccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 526 TLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 526 sL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
++. +....=++|+.+..++.+.. +..+..+|+.+ +.|+|.-++++
T Consensus 94 ~~~-------~~~~~~D~v~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 94 SLS-------FHDSSFDFAVMQAFLTSVPD-PKERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp SCC-------SCTTCEEEEEEESCGGGCCC-HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccC-------CCCCceeEEEEcchhhcCCC-HHHHHHHHHHHHHHcCCCeEEEE
Confidence 221 11112246666665554422 11233667665 67899876654
No 36
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=86.31 E-value=12 Score=37.47 Aligned_cols=112 Identities=15% Similarity=0.188 Sum_probs=64.5
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FE 518 (706)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.. +..++.+.+ .++..|++ .+
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s----~~~~~~a~~----~~~~~~~~~~v~ 125 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTLS----ENQYAHDKA----MFDEVDSPRRKE 125 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEECC----HHHHHHHHH----HHHHSCCSSCEE
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEECC----HHHHHHHHH----HHHhcCCCCceE
Confidence 446666655566789999988775 3444554422 589999864 223443333 34556765 55
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCC-----CCCHHHHHHHH-HhcCCcEEEEe
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNY-----PATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~-----p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
|....++++ ...=++|+.+..++.+... ....+.+|+.+ +.|+|.-.+++
T Consensus 126 ~~~~d~~~~----------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 126 VRIQGWEEF----------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp EEECCGGGC----------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred EEECCHHHc----------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 554333332 1122577777666655321 12345677665 67999876665
No 37
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=85.82 E-value=8.2 Score=38.23 Aligned_cols=109 Identities=15% Similarity=0.132 Sum_probs=61.2
Q ss_pred HHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEE
Q 005237 443 LLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELE 520 (706)
Q Consensus 443 ILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~ 520 (706)
+++.+.. +.-+|+|+|.|.|. +...|+.+ ..++|||+.. +..++.+. +.++..|++ .+|.
T Consensus 61 ~l~~~~~-~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~gvD~s----~~~~~~a~----~~~~~~~~~~~v~~~ 122 (285)
T 4htf_A 61 VLAEMGP-QKLRVLDAGGGEGQ----TAIKMAER-----GHQVILCDLS----AQMIDRAK----QAAEAKGVSDNMQFI 122 (285)
T ss_dssp HHHHTCS-SCCEEEEETCTTCH----HHHHHHHT-----TCEEEEEESC----HHHHHHHH----HHHHC-CCGGGEEEE
T ss_pred HHHhcCC-CCCEEEEeCCcchH----HHHHHHHC-----CCEEEEEECC----HHHHHHHH----HHHHhcCCCcceEEE
Confidence 4444443 35789999999984 45666655 2489999864 22333333 334455664 5555
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
...++++.. +....=++|+.+..++.+. ....+|+.+ +.|+|..++++.
T Consensus 123 ~~d~~~~~~------~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 123 HCAAQDVAS------HLETPVDLILFHAVLEWVA----DPRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp ESCGGGTGG------GCSSCEEEEEEESCGGGCS----CHHHHHHHHHHTEEEEEEEEEE
T ss_pred EcCHHHhhh------hcCCCceEEEECchhhccc----CHHHHHHHHHHHcCCCeEEEEE
Confidence 544333321 1111225666666665442 235566665 679998877764
No 38
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=85.45 E-value=10 Score=38.26 Aligned_cols=169 Identities=12% Similarity=0.114 Sum_probs=85.3
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeeccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLI 528 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~ 528 (706)
..-+|+|+|.|.|. +...|+.+ ..|..++|||+.. +..++. ..+.++..|+. .+|..-.+.++.
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s----~~~~~~----a~~~~~~~~~~~~v~~~~~d~~~~~ 183 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYD----PEALDG----ATRLAAGHALAGQITLHRQDAWKLD 183 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESC----HHHHHH----HHHHHTTSTTGGGEEEEECCGGGCC
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECC----HHHHHH----HHHHHHhcCCCCceEEEECchhcCC
Confidence 34579999999884 33444322 2356799999853 223333 33444556665 666554333221
Q ss_pred ccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhhh
Q 005237 529 SASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLESL 607 (706)
Q Consensus 529 ~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEqeadhns~~F~~RF~EAL~yYsAlFDSL 607 (706)
+. ..=++|+.|..++.+.. +.....+|+.+ +.|+|.-++++..-.......... .+. +
T Consensus 184 -------~~-~~fD~v~~~~~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~--------~w~----~ 242 (305)
T 3ocj_A 184 -------TR-EGYDLLTSNGLNIYEPD-DARVTELYRRFWQALKPGGALVTSFLTPPPALSPDS--------PWD----M 242 (305)
T ss_dssp -------CC-SCEEEEECCSSGGGCCC-HHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTC--------CCC----G
T ss_pred -------cc-CCeEEEEECChhhhcCC-HHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccc--------cce----e
Confidence 11 12246666655543322 11222466665 679999888764321111110000 000 0
Q ss_pred hcCCCChHHHHHHHHHhhhhhHhhhhccccCCCCChhhHHHHHHhCCCccccCC
Q 005237 608 DSVNVNLDALQKIERFLVYPCIEKIVLGRHRSPERLPPWRSLFMQSGFAPLTFS 661 (706)
Q Consensus 608 Da~~~~~d~R~~IEr~llg~eI~nIVa~R~ERhE~~~~Wr~Rm~rAGF~pvpLS 661 (706)
+.. .... ..+.+..+. +.+...+.+.-+...|+..|+++||+.+.+.
T Consensus 243 ~~~--~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 289 (305)
T 3ocj_A 243 QAI--DPHD-LQLQQLVFT----RLIQPRWNALRTHAQTRAQLEEAGFTDLRFE 289 (305)
T ss_dssp GGS--CHHH-HHHHHHHHH----HTTCCSCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ecc--ccch-hhhhhhHHH----HHHhhhhhccCCHHHHHHHHHHCCCEEEEEE
Confidence 111 1111 122222222 2233334444577899999999999987664
No 39
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=85.36 E-value=3.5 Score=40.61 Aligned_cols=111 Identities=20% Similarity=0.110 Sum_probs=59.9
Q ss_pred HHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEE
Q 005237 440 NQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFEL 519 (706)
Q Consensus 440 NQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF 519 (706)
...|++.+.-.+.-+|+|+|.|.|. +...|+. |..++|||+.. + ...+.|+... ..+|
T Consensus 23 ~~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s----~--------~~~~~a~~~~-~~~~ 80 (261)
T 3ege_A 23 VNAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPS----I--------VMRQQAVVHP-QVEW 80 (261)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSC----H--------HHHHSSCCCT-TEEE
T ss_pred HHHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCC----H--------HHHHHHHhcc-CCEE
Confidence 3456666655566789999999986 3344453 34699999864 1 1122233222 4555
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcE-EEEeecCCCC
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKI-VVSLDRSCDR 584 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkV-VVlvEqeadh 584 (706)
..-.++++. +....=++|+.+..++.+. ..+.+|+.+ +.|+ .- +++++.+.+.
T Consensus 81 ~~~d~~~~~-------~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 81 FTGYAENLA-------LPDKSVDGVISILAIHHFS----HLEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp ECCCTTSCC-------SCTTCBSEEEEESCGGGCS----SHHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred EECchhhCC-------CCCCCEeEEEEcchHhhcc----CHHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 443222221 1111225777776666552 345666655 5677 64 5555554433
No 40
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=85.29 E-value=8.1 Score=37.36 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=64.4
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEE
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFE 518 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFE 518 (706)
.-..|++.+...+.-.|+|+|.|.|. +...|+.+. + . ++|||+.. +..++.+.+++. +...+
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~~--~-~-~v~~vD~s----~~~~~~a~~~~~------~~~~~ 93 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEHG--A-K-KVLGIDLS----ERMLTEAKRKTT------SPVVC 93 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHTT--C-S-EEEEEESC----HHHHHHHHHHCC------CTTEE
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHcC--C-C-EEEEEECC----HHHHHHHHHhhc------cCCeE
Confidence 34556666665567889999999984 455566552 2 2 89999864 222333333322 33455
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
|....++++. +....=++|+.+..++.+ .....+|+.+ +.|+|..++++.
T Consensus 94 ~~~~d~~~~~-------~~~~~fD~v~~~~~l~~~----~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 94 YEQKAIEDIA-------IEPDAYNVVLSSLALHYI----ASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEECCGGGCC-------CCTTCEEEEEEESCGGGC----SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcchhhCC-------CCCCCeEEEEEchhhhhh----hhHHHHHHHHHHHcCCCcEEEEE
Confidence 5554333221 111122466666666544 2356777776 569998877764
No 41
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=84.73 E-value=15 Score=35.89 Aligned_cols=125 Identities=16% Similarity=0.126 Sum_probs=66.0
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCC--ChhhHHHHHHHHHHHHHhcCC--c
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTH--DEFELGFTQENLKHFASEINI--P 516 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~--~~~eL~~tg~rL~~fA~~lgV--p 516 (706)
..|++.+.-.+.-+|+|+|.|.|.-- ..|+.+- .|..++|||+..... .+..++.+.+++ +..++ .
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~----~~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~~----~~~~~~~~ 102 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLS----AVLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNHL----LAGPLGDR 102 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHH----HHHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHHH----HTSTTGGG
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHH----HHHHHHh--CCCCEEEEEECCccccccHHHHHHHHHHH----HhcCCCCc
Confidence 35666665455568999999888533 3344332 245699999965310 011244444444 33444 2
Q ss_pred EEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCC-c-EEEEeecCCC
Q 005237 517 FELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQP-K-IVVSLDRSCD 583 (706)
Q Consensus 517 FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~P-k-VVVlvEqead 583 (706)
.+|.... ++.... +.+....=++|+.+..++.+.. ...+++.++.|.| . .+++.+...+
T Consensus 103 v~~~~~d--~~~~~~--~~~~~~~fD~v~~~~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 103 LTVHFNT--NLSDDL--GPIADQHFDRVVLAHSLWYFAS----ANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp EEEECSC--CTTTCC--GGGTTCCCSEEEEESCGGGSSC----HHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred eEEEECC--hhhhcc--CCCCCCCEEEEEEccchhhCCC----HHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 5554432 111111 1121122357777766654422 3568888898887 3 4555565543
No 42
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=84.44 E-value=3.2 Score=40.13 Aligned_cols=96 Identities=10% Similarity=0.148 Sum_probs=51.0
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISAS 531 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~ 531 (706)
.-+|+|+|.|.|. +...|+.+ + .++|||+.. + ...+.|+.. ++|......++..
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s----~--------~~~~~a~~~---~~~~~~d~~~~~~-- 95 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDIN----E--------DMIKFCEGK---FNVVKSDAIEYLK-- 95 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSC----H--------HHHHHHHTT---SEEECSCHHHHHH--
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECC----H--------HHHHHHHhh---cceeeccHHHHhh--
Confidence 4589999988875 34555554 2 268999854 1 122334433 4444333222210
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
.+....=++|+.+..++.+.. ..+..+|+.+ +.|+|..++++
T Consensus 96 ---~~~~~~fD~i~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 96 ---SLPDKYLDGVMISHFVEHLDP--ERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp ---TSCTTCBSEEEEESCGGGSCG--GGHHHHHHHHHHHBCTTCCEEE
T ss_pred ---hcCCCCeeEEEECCchhhCCc--HHHHHHHHHHHHHcCCCcEEEE
Confidence 111112256666666654431 2356777766 68999765554
No 43
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=84.36 E-value=5.8 Score=41.50 Aligned_cols=133 Identities=13% Similarity=0.074 Sum_probs=76.9
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEI 521 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~ 521 (706)
+|++.+.. --.|+|+|.|.|.= --.+ .. ..|..+++++|.. +..+ +.+.+++..+|+++.|..
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~GpL----Al~~--~~-~~p~a~y~a~DId----~~~l----e~a~~~l~~~g~~~~~~v 187 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNPL----AAPW--MG-LPAETVYIASDID----ARLV----GFVDEALTRLNVPHRTNV 187 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGGG----CCTT--TT-CCTTCEEEEEESB----HHHH----HHHHHHHHHTTCCEEEEE
T ss_pred HHHhccCC--CceeeeeccCccHH----HHHH--Hh-hCCCCEEEEEeCC----HHHH----HHHHHHHHhcCCCceEEE
Confidence 44455533 34789999887742 1111 11 3478999999853 3334 455556677899988866
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEe-ecC-CCCCCCChHHHHHHHHHH
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSL-DRS-CDRPDFPFAHHMVHALQS 599 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlv-Eqe-adhns~~F~~RF~EAL~y 599 (706)
..+ +.. .-....+++.+|..++.+-.. .....++.+..|+|..||+. ++- ...-++-+.+ .
T Consensus 188 ~D~--~~~------~p~~~~DvaL~lkti~~Le~q--~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~-------~ 250 (281)
T 3lcv_B 188 ADL--LED------RLDEPADVTLLLKTLPCLETQ--QRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQ-------N 250 (281)
T ss_dssp CCT--TTS------CCCSCCSEEEETTCHHHHHHH--STTHHHHHHHHSSCSEEEEEEECC-------CHHH-------H
T ss_pred eee--ccc------CCCCCcchHHHHHHHHHhhhh--hhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhh-------H
Confidence 432 111 112245688888877665332 22356699999999888774 542 2222333433 3
Q ss_pred HHHHhhhhh
Q 005237 600 YSGLLESLD 608 (706)
Q Consensus 600 YsAlFDSLD 608 (706)
|+..|+..=
T Consensus 251 Y~~~~e~~~ 259 (281)
T 3lcv_B 251 YSQSFESQA 259 (281)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888753
No 44
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=84.30 E-value=9.2 Score=37.34 Aligned_cols=111 Identities=13% Similarity=0.155 Sum_probs=61.1
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FE 518 (706)
..|++.+.-.+.-+|+|+|.|.|.- ...|+.+.+ .++|||+.. +..++.+ .+.++..|++ ++
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~~----~~v~gvD~s----~~~~~~a----~~~~~~~~~~~~~~ 114 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKP----AVRLATARD----VRVTGISIS----RPQVNQA----NARATAAGLANRVT 114 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHH----HHHHHHHSC----CEEEEEESC----HHHHHHH----HHHHHHTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHH----HHHHHHhcC----CEEEEEeCC----HHHHHHH----HHHHHhcCCCcceE
Confidence 4455555545566999999988753 344554332 589999854 2223333 3334555664 66
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
|....++++. +....=++|+.+..++.+. ....+|+.+ +.|+|.-.+++
T Consensus 115 ~~~~d~~~~~-------~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 115 FSYADAMDLP-------FEDASFDAVWALESLHHMP----DRGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp EEECCTTSCC-------SCTTCEEEEEEESCTTTSS----CHHHHHHHHHTTEEEEEEEEE
T ss_pred EEECccccCC-------CCCCCccEEEEechhhhCC----CHHHHHHHHHHHcCCCeEEEE
Confidence 6553332221 1111124666665555442 246777766 57899876554
No 45
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=84.28 E-value=18 Score=33.67 Aligned_cols=93 Identities=14% Similarity=0.106 Sum_probs=52.8
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeeccccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISA 530 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~ 530 (706)
+.-+|+|+|.|.|. +...|+.+. . -++|||+.. +..++.+.+ -++..|+..+|..-.+.++.
T Consensus 49 ~~~~vlD~g~G~G~----~~~~l~~~~--~--~~v~~vD~~----~~~~~~a~~----~~~~~~~~~~~~~~d~~~~~-- 110 (207)
T 1wy7_A 49 EGKVVADLGAGTGV----LSYGALLLG--A--KEVICVEVD----KEAVDVLIE----NLGEFKGKFKVFIGDVSEFN-- 110 (207)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHTT--C--SEEEEEESC----HHHHHHHHH----HTGGGTTSEEEEESCGGGCC--
T ss_pred CcCEEEEeeCCCCH----HHHHHHHcC--C--CEEEEEECC----HHHHHHHHH----HHHHcCCCEEEEECchHHcC--
Confidence 34589999999987 444566552 1 289999853 223433333 34455665555443222221
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcC
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQ 571 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~ 571 (706)
..=++|+.|.+++.... .....+|+.+..+-
T Consensus 111 --------~~~D~v~~~~p~~~~~~--~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 111 --------SRVDIVIMNPPFGSQRK--HADRPFLLKAFEIS 141 (207)
T ss_dssp --------CCCSEEEECCCCSSSST--TTTHHHHHHHHHHC
T ss_pred --------CCCCEEEEcCCCccccC--CchHHHHHHHHHhc
Confidence 12358999988765432 23446676665554
No 46
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=83.54 E-value=5 Score=36.43 Aligned_cols=114 Identities=14% Similarity=0.066 Sum_probs=64.6
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-- 516 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-- 516 (706)
..+.|++.+.-.+.-+|+|+|.|.|. +...|+.+ ..++|+|+.. +..++.+.+ .++..+++
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-----~~~v~~~D~~----~~~~~~a~~----~~~~~~~~~~ 102 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGV----IGIALADE-----VKSTTMADIN----RRAIKLAKE----NIKLNNLDNY 102 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-----SSEEEEEESC----HHHHHHHHH----HHHHTTCTTS
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-----CCeEEEEECC----HHHHHHHHH----HHHHcCCCcc
Confidence 34667777765566789999999874 44456655 2489999853 223333333 34455665
Q ss_pred -EEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 517 -FELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 517 -FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
++|....+.+ . +....=++|++|.+++.. ......+|+.+ +.|+|.-++++..
T Consensus 103 ~~~~~~~d~~~--~------~~~~~~D~v~~~~~~~~~---~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 103 DIRVVHSDLYE--N------VKDRKYNKIITNPPIRAG---KEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp CEEEEECSTTT--T------CTTSCEEEEEECCCSTTC---HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECchhc--c------cccCCceEEEECCCcccc---hhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 6665432211 1 111122577777665421 11244566555 6789987776643
No 47
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=82.88 E-value=17 Score=32.74 Aligned_cols=111 Identities=15% Similarity=0.085 Sum_probs=59.7
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELE 520 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~ 520 (706)
..+++.+.-...-+|+|+|.|.|. +...|+.+. |..++|+|+.. +..++.+.++ ++..|++-.+
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~---~~~~v~~vD~~----~~~~~~a~~~----~~~~~~~~~~- 78 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGS----IAIEWLRST---PQTTAVCFEIS----EERRERILSN----AINLGVSDRI- 78 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTH----HHHHHHTTS---SSEEEEEECSC----HHHHHHHHHH----HHTTTCTTSE-
T ss_pred HHHHHHhcccCCCeEEEeCCCCCH----HHHHHHHHC---CCCeEEEEeCC----HHHHHHHHHH----HHHhCCCCCE-
Confidence 445666665666789999998873 445556553 46899999854 2234444333 4456665222
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
.+..+..+. +......=++|+++..++. ..+|+.+ +.|+|.-.+++.
T Consensus 79 ~~~~d~~~~----~~~~~~~~D~i~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 79 AVQQGAPRA----FDDVPDNPDVIFIGGGLTA--------PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp EEECCTTGG----GGGCCSCCSEEEECC-TTC--------TTHHHHHHHTCCTTCEEEEE
T ss_pred EEecchHhh----hhccCCCCCEEEECCcccH--------HHHHHHHHHhcCCCCEEEEE
Confidence 222121111 0000012357777665432 3455554 568998776653
No 48
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=82.51 E-value=8.3 Score=35.99 Aligned_cols=110 Identities=19% Similarity=0.193 Sum_probs=63.4
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEE
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFE 518 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFE 518 (706)
....|++.+...+.-+|+|+|.|.|. +...|+.+ + .++|||+.. +..++ .|+.. -..+
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s----~~~~~--------~a~~~-~~~~ 97 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEGW----LLRALADR-G----IEAVGVDGD----RTLVD--------AARAA-GAGE 97 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT-T----CEEEEEESC----HHHHH--------HHHHT-CSSC
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC-C----CEEEEEcCC----HHHHH--------HHHHh-cccc
Confidence 45677888776666899999999984 55667665 2 389999854 21232 33333 2233
Q ss_pred EEEeecccccccCCCCCCCCCC-CceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 519 LEILSLETLISASWPLPLQGLE-NDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~-dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
|....++++.... ..... =++|+.+..++ . .....+|+.+ +.|+|.-++++.
T Consensus 98 ~~~~~~~~~~~~~----~~~~~~fD~v~~~~~l~-~----~~~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 98 VHLASYAQLAEAK----VPVGKDYDLICANFALL-H----QDIIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp EEECCHHHHHTTC----SCCCCCEEEEEEESCCC-S----SCCHHHHHHHHHTEEEEEEEEEE
T ss_pred cchhhHHhhcccc----cccCCCccEEEECchhh-h----hhHHHHHHHHHHHhCCCeEEEEE
Confidence 4444344442211 11111 25666666655 2 2344666665 688998877654
No 49
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=82.42 E-value=7 Score=41.63 Aligned_cols=118 Identities=12% Similarity=0.081 Sum_probs=66.6
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC---
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--- 515 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--- 515 (706)
....+++.+.....-+|+|+|.|.|. +...|+.+. |..+||+|+.. +..++.+.+++. ..|+
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s----~~al~~Ar~n~~----~ngl~~~ 274 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDES----PMAVASSRLNVE----TNMPEAL 274 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESC----HHHHHHHHHHHH----HHCGGGG
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECc----HHHHHHHHHHHH----HcCCCcC
Confidence 44567888876666789999999984 344445442 45699999853 334555555543 3343
Q ss_pred -cEEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCC-CHHHHHHHH-HhcCCcEEEEee
Q 005237 516 -PFELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPA-TFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 516 -pFEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~-~~~~vL~~I-RsL~PkVVVlvE 579 (706)
.++|..-.+. +. +....=++|+.|.+++....... ....+|+.+ +.|+|.-.+++.
T Consensus 275 ~~v~~~~~D~~--~~------~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 275 DRCEFMINNAL--SG------VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp GGEEEEECSTT--TT------CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEechhh--cc------CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 3666553221 11 11112368888988764322212 223566665 568999877764
No 50
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=82.42 E-value=3.8 Score=42.22 Aligned_cols=123 Identities=11% Similarity=0.053 Sum_probs=71.5
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISAS 531 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~ 531 (706)
--.|+|+|.|.|.= +++.+ |..+++++|.. . .+-+.+.+++...|+++.|.........
T Consensus 106 p~~VLDlGCG~gpL------al~~~----~~~~y~a~DId----~----~~i~~ar~~~~~~g~~~~~~v~D~~~~~--- 164 (253)
T 3frh_A 106 PRRVLDIACGLNPL------ALYER----GIASVWGCDIH----Q----GLGDVITPFAREKDWDFTFALQDVLCAP--- 164 (253)
T ss_dssp CSEEEEETCTTTHH------HHHHT----TCSEEEEEESB----H----HHHHHHHHHHHHTTCEEEEEECCTTTSC---
T ss_pred CCeEEEecCCccHH------HHHhc----cCCeEEEEeCC----H----HHHHHHHHHHHhcCCCceEEEeecccCC---
Confidence 34899999988731 12212 68899999853 2 3345666778888999988875321111
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEeec--CCCCCCCChHHHHHHHHHHHHHHhhhhhc
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLDR--SCDRPDFPFAHHMVHALQSYSGLLESLDS 609 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvEq--eadhns~~F~~RF~EAL~yYsAlFDSLDa 609 (706)
+. ...+++.++..++.+-.. .....++.+..|+|+.||+.=. -...-++-+.+ .|+..|+..=+
T Consensus 165 ----~~-~~~DvvLllk~lh~LE~q--~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~-------~Y~~~~e~~~~ 230 (253)
T 3frh_A 165 ----PA-EAGDLALIFKLLPLLERE--QAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEA-------NYAAWFEGGLP 230 (253)
T ss_dssp ----CC-CBCSEEEEESCHHHHHHH--STTHHHHHHHHCBCSEEEEEEECC------------------CHHHHHHHHSC
T ss_pred ----CC-CCcchHHHHHHHHHhhhh--chhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhh-------HHHHHHHHHhh
Confidence 11 245688888777765332 1235668888999888777533 22211222322 37777777543
No 51
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=82.36 E-value=16 Score=32.79 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=60.1
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFELE 520 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFEF~ 520 (706)
.|++.+.-.+.-+|+|+|.|.|. +...|+. +..++|+|+.. +..++.+.+ .++..|+ ..+|.
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~----~~~~~~a~~----~~~~~~~~~~~~~ 88 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYL----DGAIEVTKQ----NLAKFNIKNCQII 88 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECS----HHHHHHHHH----HHHHTTCCSEEEE
T ss_pred HHHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCC----HHHHHHHHH----HHHHcCCCcEEEE
Confidence 45555554555689999999986 3444554 45699999853 223443333 3445565 35554
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEee
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLD 579 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvE 579 (706)
...+.+ . +....=++|+.+.+ ...+.+|+.++++ |.-.+++.
T Consensus 89 ~~d~~~--~------~~~~~~D~i~~~~~--------~~~~~~l~~~~~~-~gG~l~~~ 130 (183)
T 2yxd_A 89 KGRAED--V------LDKLEFNKAFIGGT--------KNIEKIIEILDKK-KINHIVAN 130 (183)
T ss_dssp ESCHHH--H------GGGCCCSEEEECSC--------SCHHHHHHHHHHT-TCCEEEEE
T ss_pred ECCccc--c------ccCCCCcEEEECCc--------ccHHHHHHHHhhC-CCCEEEEE
Confidence 432222 1 11112246666643 2467899999999 87666553
No 52
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=82.30 E-value=16 Score=35.17 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=60.7
Q ss_pred HHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--E
Q 005237 440 NQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--F 517 (706)
Q Consensus 440 NQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--F 517 (706)
...|++.+.-...-+|+|+|.|.|.. ...|+.+.+ .++|||+.. +..++. ..+.++..|+. .
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~----~~~la~~~~----~~v~gvD~s----~~~l~~----a~~~~~~~~~~~~v 88 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEM----LCTWARDHG----ITGTGIDMS----SLFTAQ----AKRRAEELGVSERV 88 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHH----HHHHHHHTC----CEEEEEESC----HHHHHH----HHHHHHHTTCTTTE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHH----HHHHHHhcC----CeEEEEeCC----HHHHHH----HHHHHHhcCCCcce
Confidence 44556665544556899999999873 334444332 378999854 223333 33445556664 6
Q ss_pred EEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 518 ELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 518 EF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
+|....++++. . ...=++|+.+..++.+. . ...+|+.+ |.|+|...+++
T Consensus 89 ~~~~~d~~~~~-------~-~~~fD~V~~~~~~~~~~---~-~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 89 HFIHNDAAGYV-------A-NEKCDVAACVGATWIAG---G-FAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEEESCCTTCC-------C-SSCEEEEEEESCGGGTS---S-SHHHHHHHTTSEEEEEEEEE
T ss_pred EEEECChHhCC-------c-CCCCCEEEECCChHhcC---C-HHHHHHHHHHHcCCCeEEEE
Confidence 66654332221 1 01114555554444332 2 35666665 67899876654
No 53
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=82.13 E-value=18 Score=34.83 Aligned_cols=125 Identities=16% Similarity=0.045 Sum_probs=68.9
Q ss_pred hhCCccchhHHHHHHHHHHhhcc-CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHH
Q 005237 427 EISPILQFANFTCNQALLEAFEG-CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQEN 505 (706)
Q Consensus 427 e~sP~lkFAhftANQAILEA~eG-~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~r 505 (706)
+..+-..-.+......+++.+.+ .+.-+|+|+|.|.|.- ...|+.+.+ . +||||+.. +..++ .
T Consensus 21 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~----~~~l~~~~~---~-~v~~vD~s----~~~~~----~ 84 (257)
T 3f4k_A 21 KLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGGQ----TLFLADYVK---G-QITGIDLF----PDFIE----I 84 (257)
T ss_dssp TTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHH----HHHHHHHCC---S-EEEEEESC----HHHHH----H
T ss_pred cCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHH----HHHHHHhCC---C-eEEEEECC----HHHHH----H
Confidence 33333333344445556666643 3345899999998853 344444432 2 99999864 22233 3
Q ss_pred HHHHHHhcCCc--EEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 506 LKHFASEINIP--FELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 506 L~~fA~~lgVp--FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
..+.++..|++ .+|....++++. +....=++|+.+..++.+ ..+.+|+.+ +.|+|.-++++.
T Consensus 85 a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~fD~v~~~~~l~~~-----~~~~~l~~~~~~L~pgG~l~~~ 149 (257)
T 3f4k_A 85 FNENAVKANCADRVKGITGSMDNLP-------FQNEELDLIWSEGAIYNI-----GFERGMNEWSKYLKKGGFIAVS 149 (257)
T ss_dssp HHHHHHHTTCTTTEEEEECCTTSCS-------SCTTCEEEEEEESCSCCC-----CHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHcCCCCceEEEECChhhCC-------CCCCCEEEEEecChHhhc-----CHHHHHHHHHHHcCCCcEEEEE
Confidence 34445666776 666554332221 111122566666665543 256677766 569998876653
No 54
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=81.86 E-value=15 Score=34.40 Aligned_cols=102 Identities=19% Similarity=0.142 Sum_probs=53.9
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISAS 531 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~ 531 (706)
.-+|+|+|.|.|. +...|+.+ ++ ++|+|+.. +..++.+.+++ +..+...+|....+.++
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s----~~~~~~a~~~~----~~~~~~~~~~~~d~~~~---- 97 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDIS----EDMIRKAREYA----KSRESNVEFIVGDARKL---- 97 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESC----HHHHHHHHHHH----HHTTCCCEEEECCTTSC----
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECC----HHHHHHHHHHH----HhcCCCceEEECchhcC----
Confidence 4589999999884 34556654 23 99999854 22344444433 33344455544322221
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
.+....=++|+.|.+++.... .....+|+.+ +.|+|.-++++.
T Consensus 98 ---~~~~~~~D~v~~~~~~~~~~~--~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 98 ---SFEDKTFDYVIFIDSIVHFEP--LELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp ---CSCTTCEEEEEEESCGGGCCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCCCcEEEEEEcCchHhCCH--HHHHHHHHHHHHHcCCCcEEEEE
Confidence 111112256666655322111 1234566655 678998766553
No 55
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=81.79 E-value=5.9 Score=36.91 Aligned_cols=98 Identities=11% Similarity=0.056 Sum_probs=54.5
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISAS 531 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~ 531 (706)
.-.|+|+|.|.|. +...|+.+ | .++|||+.. +..++.+.++ .-..+|....++++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s----~~~~~~a~~~--------~~~~~~~~~d~~~~~--- 97 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPA----TRLVELARQT--------HPSVTFHHGTITDLS--- 97 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCC----HHHHHHHHHH--------CTTSEEECCCGGGGG---
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCC----HHHHHHHHHh--------CCCCeEEeCcccccc---
Confidence 5689999999986 55666665 2 289999853 2223333322 223444443332221
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
+....=++|+.+..++.+. +.....+|+.+ +.|+|...+++.
T Consensus 98 ----~~~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 98 ----DSPKRWAGLLAWYSLIHMG--PGELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp ----GSCCCEEEEEEESSSTTCC--TTTHHHHHHHHHHTEEEEEEEEEE
T ss_pred ----cCCCCeEEEEehhhHhcCC--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 1111224666666655442 13456777766 678998766653
No 56
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=81.74 E-value=9.9 Score=37.56 Aligned_cols=106 Identities=9% Similarity=0.111 Sum_probs=57.6
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELE 520 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~ 520 (706)
..|++.+.-.+.-.|+|+|.|.|.-. ..|+. +..++|||+.. +..++.+.+++ -++ +|.
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~----~~l~~-----~~~~v~gvD~s----~~~~~~a~~~~------~~~--~~~ 105 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLT----EKIAQ-----SGAEVLGTDNA----ATMIEKARQNY------PHL--HFD 105 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHH----HHHHH-----TTCEEEEEESC----HHHHHHHHHHC------TTS--CEE
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHH----HHHHh-----CCCeEEEEECC----HHHHHHHHhhC------CCC--EEE
Confidence 34556665555568999999988643 34443 23589999864 22233333322 133 333
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
...++++ + +. ..=++|+.+..++.+. ..+.+|+.+ |.|+|...+++.
T Consensus 106 ~~d~~~~-----~--~~-~~fD~v~~~~~l~~~~----d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 106 VADARNF-----R--VD-KPLDAVFSNAMLHWVK----EPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp ECCTTTC-----C--CS-SCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECChhhC-----C--cC-CCcCEEEEcchhhhCc----CHHHHHHHHHHhcCCCcEEEEE
Confidence 3322221 1 11 1124666666665442 245666655 678998776654
No 57
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=81.41 E-value=20 Score=35.48 Aligned_cols=111 Identities=14% Similarity=0.163 Sum_probs=60.3
Q ss_pred HHHHHhh----ccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc
Q 005237 441 QALLEAF----EGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP 516 (706)
Q Consensus 441 QAILEA~----eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp 516 (706)
..|++.+ .-...-+|+|+|.|.|.--..|.+.+ + .++|||+.. +..++.+.++ ++..|++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s----~~~~~~a~~~----~~~~~~~ 131 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIA----PVQNKRNEEY----NNQAGLA 131 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESC----HHHHHHHHHH----HHHHTCT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCC----HHHHHHHHHH----HHhcCCC
Confidence 4455555 33455689999999887544444433 2 289999864 2234444443 3344553
Q ss_pred --EEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 517 --FELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 517 --FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
++|....++++ .+....=++|+.+..++.+. . ...+|+.+ |.|+|.-.+++
T Consensus 132 ~~~~~~~~d~~~~-------~~~~~~fD~v~~~~~l~~~~---~-~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 132 DNITVKYGSFLEI-------PCEDNSYDFIWSQDAFLHSP---D-KLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp TTEEEEECCTTSC-------SSCTTCEEEEEEESCGGGCS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred cceEEEEcCcccC-------CCCCCCEeEEEecchhhhcC---C-HHHHHHHHHHHcCCCeEEEE
Confidence 56654332222 11111124566665555442 2 45666665 67899876654
No 58
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=80.67 E-value=4.1 Score=42.22 Aligned_cols=110 Identities=14% Similarity=0.132 Sum_probs=61.7
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFE 518 (706)
..|++.+.-.+.-+|+|+|.|.|.- ...|+.+. |.+++|+++.+. .+. .+.++..++ ..+
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~-----~~~------~~~~~~~~~~~~v~ 235 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGF----LLTVLREH---PGLQGVLLDRAE-----VVA------RHRLDAPDVAGRWK 235 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHH----HHHHHHHC---TTEEEEEEECHH-----HHT------TCCCCCGGGTTSEE
T ss_pred HHHHHhCCccCCceEEEECCccCHH----HHHHHHHC---CCCEEEEecCHH-----Hhh------cccccccCCCCCeE
Confidence 4677777656678999999999853 44444432 478999998641 111 111111222 255
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE-eec
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS-LDR 580 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl-vEq 580 (706)
|..-.+ +++ +. .-++|+.+..+|.+.. .....+|+.+ +.|+|.-.++ +|.
T Consensus 236 ~~~~d~--~~~------~p--~~D~v~~~~vlh~~~d--~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 236 VVEGDF--LRE------VP--HADVHVLKRILHNWGD--EDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEECCT--TTC------CC--CCSEEEEESCGGGSCH--HHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred EEecCC--CCC------CC--CCcEEEEehhccCCCH--HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 554322 111 11 3357777766664422 1224677776 6789987654 454
No 59
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=80.20 E-value=2.5 Score=44.78 Aligned_cols=109 Identities=16% Similarity=0.101 Sum_probs=63.0
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEI 521 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~ 521 (706)
.|++.+.-.+.-.|+|+|.|.|. ++..|+.+ | .++|||+.. + ...+.|+..|++.....
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s----~--------~~~~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPS----S--------GVAAKAREKGIRVRTDF 156 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCC----H--------HHHHHHHTTTCCEECSC
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCC----H--------HHHHHHHHcCCCcceee
Confidence 45555554556789999999987 55666654 2 299999864 1 33345666677654322
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
+..++.+. + .+....=++|+.+..++.+. ....+|+.+ +.|+|..+++++
T Consensus 157 ~~~~~~~~--l--~~~~~~fD~I~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 157 FEKATADD--V--RRTEGPANVIYAANTLCHIP----YVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp CSHHHHHH--H--HHHHCCEEEEEEESCGGGCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred echhhHhh--c--ccCCCCEEEEEECChHHhcC----CHHHHHHHHHHHcCCCeEEEEE
Confidence 21111111 0 01111224666666666553 356777776 678999877765
No 60
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=79.82 E-value=10 Score=36.50 Aligned_cols=112 Identities=17% Similarity=0.164 Sum_probs=59.3
Q ss_pred HHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEe
Q 005237 443 LLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEIL 522 (706)
Q Consensus 443 ILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V 522 (706)
+++.....+.-+|+|+|.|.|. +...|+.+ + .++|||+.. +..++.+.++ ++..++.++|...
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s----~~~l~~a~~~----~~~~~~~v~~~~~ 95 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLH----EEMLRVARRK----AKERNLKIEFLQG 95 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESC----HHHHHHHHHH----HHHTTCCCEEEES
T ss_pred HHHHhcccCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECC----HHHHHHHHHH----HHhcCCceEEEEC
Confidence 3444433445689999999985 34455554 2 389999854 2234444444 3445666666543
Q ss_pred ecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 523 SLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 523 ~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
.+.++. +. ..=++|+.++....+.. +.....+|+.+ +.|+|..+++++-
T Consensus 96 d~~~~~-------~~-~~fD~v~~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 96 DVLEIA-------FK-NEFDAVTMFFSTIMYFD-EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp CGGGCC-------CC-SCEEEEEECSSGGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Chhhcc-------cC-CCccEEEEcCCchhcCC-HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 332221 11 11134444322111111 12345666665 6799999888764
No 61
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=78.72 E-value=11 Score=35.32 Aligned_cols=111 Identities=10% Similarity=0.070 Sum_probs=61.4
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEI 521 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~ 521 (706)
.|.+.+...+.-+|+|+|.|.|. +...|+.+. -++|||+.. +..++.+.+++. ..+ .++|..
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~-----~~v~~vD~s----~~~~~~a~~~~~----~~~-~~~~~~ 103 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPHC-----KRLTVIDVM----PRAIGRACQRTK----RWS-HISWAA 103 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGGE-----EEEEEEESC----HHHHHHHHHHTT----TCS-SEEEEE
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHcC-----CEEEEEECC----HHHHHHHHHhcc----cCC-CeEEEE
Confidence 34444555677899999999984 455566542 489999854 223444443332 222 455554
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
..++++.. ...=++|+.+..++.+.. +..+..+|+.+ +.|+|..++++.
T Consensus 104 ~d~~~~~~--------~~~fD~v~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 104 TDILQFST--------AELFDLIVVAEVLYYLED-MTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp CCTTTCCC--------SCCEEEEEEESCGGGSSS-HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cchhhCCC--------CCCccEEEEccHHHhCCC-HHHHHHHHHHHHHHcCCCCEEEEE
Confidence 33322221 011256777766654432 12234555554 689999877763
No 62
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=78.66 E-value=30 Score=34.71 Aligned_cols=110 Identities=12% Similarity=0.159 Sum_probs=61.3
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FE 518 (706)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|||+.. +..++.+.+ .++..|+. .+
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s----~~~~~~a~~----~~~~~~~~~~v~ 143 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLS----KNQHARCEQ----VLASIDTNRSRQ 143 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESC----HHHHHHHHH----HHHTSCCSSCEE
T ss_pred HHHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECC----HHHHHHHHH----HHHhcCCCCceE
Confidence 345565554556689999998875 3344444332 289999854 222333333 34455654 55
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
|....++++. ..=++|+.+..++.+.. .....+|+.+ +.|+|.-.+++
T Consensus 144 ~~~~d~~~~~----------~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 144 VLLQGWEDFA----------EPVDRIVSIEAFEHFGH--ENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EEESCGGGCC----------CCCSEEEEESCGGGTCG--GGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEECChHHCC----------CCcCEEEEeChHHhcCH--HHHHHHHHHHHHhcCCCcEEEE
Confidence 5443332221 12256766666654421 2355677665 67899876654
No 63
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=78.59 E-value=9.3 Score=39.92 Aligned_cols=104 Identities=15% Similarity=0.067 Sum_probs=62.0
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeecccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLIS 529 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~~ 529 (706)
.-.|+|+|.|.|. +...|+.+ +.-+++||+.. . -++. ..+.++..|+. .+|..-.++++.
T Consensus 67 ~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s-~----~l~~----a~~~~~~~~~~~~v~~~~~d~~~~~- 128 (349)
T 3q7e_A 67 DKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS-S----ISDY----AVKIVKANKLDHVVTIIKGKVEEVE- 128 (349)
T ss_dssp TCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS-T----HHHH----HHHHHHHTTCTTTEEEEESCTTTCC-
T ss_pred CCEEEEEeccchH----HHHHHHHC----CCCEEEEECcH-H----HHHH----HHHHHHHcCCCCcEEEEECcHHHcc-
Confidence 3469999999984 45556655 24699999864 1 2333 33445556765 666554333331
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
+....=++|+.+++...+.. ...++.+|+.+ |-|+|..+++.+.
T Consensus 129 ------~~~~~fD~Iis~~~~~~l~~-~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 129 ------LPVEKVDIIISEWMGYCLFY-ESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp ------CSSSCEEEEEECCCBBTBTB-TCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ------CCCCceEEEEEccccccccC-chhHHHHHHHHHHhCCCCCEEcccc
Confidence 11112246666654333322 24578888887 7899999887543
No 64
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=78.33 E-value=7 Score=37.10 Aligned_cols=104 Identities=14% Similarity=0.104 Sum_probs=58.1
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeeccccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISA 530 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~ 530 (706)
+.-+|+|+|.|.|.- ...|+.+ + .++|+|+.. +..++.+.+++ ...++.++|....+.++.
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~--~---~~~~~~D~s----~~~~~~a~~~~----~~~~~~~~~~~~d~~~~~-- 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK--F---KNTWAVDLS----QEMLSEAENKF----RSQGLKPRLACQDISNLN-- 97 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG--S---SEEEEECSC----HHHHHHHHHHH----HHTTCCCEEECCCGGGCC--
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC--C---CcEEEEECC----HHHHHHHHHHH----hhcCCCeEEEecccccCC--
Confidence 556899999998873 3455544 2 389999854 22344444443 334555555443332221
Q ss_pred CCCCCCCCCCCceEEEec-CcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 531 SWPLPLQGLENDVTAVNL-PIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~-~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
+. ..=++|+.+. .++.+.. +.....+|+.+ +.|+|.-+++++-
T Consensus 98 -----~~-~~fD~v~~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 98 -----IN-RKFDLITCCLDSTNYIID-SDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp -----CS-CCEEEEEECTTGGGGCCS-HHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----cc-CCceEEEEcCccccccCC-HHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 11 1225666665 5554421 12345667665 5789998777643
No 65
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=78.22 E-value=14 Score=34.97 Aligned_cols=104 Identities=15% Similarity=0.104 Sum_probs=57.9
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC---cEEEEEeecccccc
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI---PFELEILSLETLIS 529 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV---pFEF~~V~lesL~~ 529 (706)
-.|+|+|.|.|.-- ..++.+. .-+||+|+.. +..++.+.++ ++..|+ ..+|..-.+.++..
T Consensus 55 ~~vLDlGcGtG~~~----~~~~~~~----~~~v~gvD~s----~~~l~~a~~~----~~~~~~~~~~v~~~~~d~~~~~~ 118 (201)
T 2ift_A 55 SECLDGFAGSGSLG----FEALSRQ----AKKVTFLELD----KTVANQLKKN----LQTLKCSSEQAEVINQSSLDFLK 118 (201)
T ss_dssp CEEEETTCTTCHHH----HHHHHTT----CSEEEEECSC----HHHHHHHHHH----HHHTTCCTTTEEEECSCHHHHTT
T ss_pred CeEEEcCCccCHHH----HHHHHcc----CCEEEEEECC----HHHHHHHHHH----HHHhCCCccceEEEECCHHHHHH
Confidence 47999999988532 2233332 1489999853 3334444444 344565 45555432222211
Q ss_pred cCCCCCCCCCC-CceEEEecCcccccCCCCCHHHHHHHHHh---cCCcEEEEeecCC
Q 005237 530 ASWPLPLQGLE-NDVTAVNLPIGVFSNYPATFPLVLRFVKQ---LQPKIVVSLDRSC 582 (706)
Q Consensus 530 ~~~~l~Lr~~~-dEaLAVN~~~~~l~~~p~~~~~vL~~IRs---L~PkVVVlvEqea 582 (706)
.+.... =++|+.|.+++ ....+.+|+.+.. |+|.-+++++-..
T Consensus 119 -----~~~~~~~fD~I~~~~~~~-----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 119 -----QPQNQPHFDVVFLDPPFH-----FNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp -----SCCSSCCEEEEEECCCSS-----SCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred -----hhccCCCCCEEEECCCCC-----CccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 011112 25777777643 1346678888865 9999887776543
No 66
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=78.12 E-value=8.3 Score=36.67 Aligned_cols=102 Identities=10% Similarity=0.109 Sum_probs=56.8
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEEEEEeecccccccC
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFELEILSLETLISAS 531 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFEF~~V~lesL~~~~ 531 (706)
-+|+|+|.|.|.--..+ +.+.. -+||+|+.. +..++.+.++ ++..|+ ..+|..-.+.++.+
T Consensus 56 ~~vLDlgcG~G~~~~~l----~~~~~----~~V~~vD~s----~~~l~~a~~~----~~~~~~~~v~~~~~D~~~~~~-- 117 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEA----LSRYA----AGATLIEMD----RAVSQQLIKN----LATLKAGNARVVNSNAMSFLA-- 117 (202)
T ss_dssp CEEEETTCTTCHHHHHH----HHTTC----SEEEEECSC----HHHHHHHHHH----HHHTTCCSEEEECSCHHHHHS--
T ss_pred CeEEEeCCCcCHHHHHH----HhcCC----CEEEEEECC----HHHHHHHHHH----HHHcCCCcEEEEECCHHHHHh--
Confidence 47999999988643322 22321 289999853 3334444444 445565 45554322222111
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHh---cCCcEEEEeecC
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQ---LQPKIVVSLDRS 581 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRs---L~PkVVVlvEqe 581 (706)
.....=++|++|.+++. ...+.+|+.++. |+|.-+++++-.
T Consensus 118 ----~~~~~fD~V~~~~p~~~-----~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 118 ----QKGTPHNIVFVDPPFRR-----GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp ----SCCCCEEEEEECCSSST-----TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ----hcCCCCCEEEECCCCCC-----CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 00011257777766441 345678888876 999987776543
No 67
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=77.89 E-value=16 Score=38.57 Aligned_cols=114 Identities=18% Similarity=0.132 Sum_probs=66.5
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FE 518 (706)
++|++...-.+.-.|+|+|.|.| .+...++.+ | .-+||||+.. . -++ ...+.++..|++ .+
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g--~~~V~gvD~s-~----~~~----~a~~~~~~~~~~~~v~ 115 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--G--ARKVYAVEAT-K----MAD----HARALVKANNLDHIVE 115 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--T--CSEEEEEESS-T----THH----HHHHHHHHTTCTTTEE
T ss_pred HHHHhccccCCCCEEEEeccCcC----HHHHHHHhc--C--CCEEEEEccH-H----HHH----HHHHHHHHcCCCCeEE
Confidence 44544444445568999999998 334455555 2 1399999964 2 233 333445556765 56
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
|..-.++++. +. ..=++|+.|+..+.+ .....++.+|+.+ +-|+|..+++...
T Consensus 116 ~~~~d~~~~~-------~~-~~~D~Iv~~~~~~~l-~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 116 VIEGSVEDIS-------LP-EKVDVIISEWMGYFL-LRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEESCGGGCC-------CS-SCEEEEEECCCBTTB-TTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEECchhhcC-------cC-CcceEEEEcChhhcc-cchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 6543333322 11 122466666543332 2224577889887 8899998887643
No 68
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=77.04 E-value=11 Score=35.11 Aligned_cols=108 Identities=18% Similarity=0.122 Sum_probs=59.4
Q ss_pred HHHHHHhhcc-CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcC-CcE
Q 005237 440 NQALLEAFEG-CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEIN-IPF 517 (706)
Q Consensus 440 NQAILEA~eG-~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lg-VpF 517 (706)
...|++.+.. ...-+|+|+|.|.|. +...|+.+ ..++|||+.. + ...+.|+..+ -..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~-----~~~v~~~D~s----~--------~~~~~a~~~~~~~~ 92 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL-----ADRVTALDGS----A--------EMIAEAGRHGLDNV 92 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH-----SSEEEEEESC----H--------HHHHHHGGGCCTTE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc-----CCeEEEEeCC----H--------HHHHHHHhcCCCCe
Confidence 4556676652 333599999999986 34445544 2389999854 1 2233344455 345
Q ss_pred EEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 518 ELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 518 EF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
+|....+.++ +....=++|+.+..++.+.. ..+..+|+.+ +.|+|..++++
T Consensus 93 ~~~~~d~~~~--------~~~~~~D~v~~~~~l~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 93 EFRQQDLFDW--------TPDRQWDAVFFAHWLAHVPD--DRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp EEEECCTTSC--------CCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEecccccC--------CCCCceeEEEEechhhcCCH--HHHHHHHHHHHHHcCCCeEEEE
Confidence 5554332222 11112246666666554422 1135666665 68899876654
No 69
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=76.77 E-value=56 Score=32.79 Aligned_cols=138 Identities=12% Similarity=0.076 Sum_probs=69.1
Q ss_pred HHHHhhCCccchhHHHHHHHHHHh----hccC-ceeEEEeccccc---ccchHHHHHHHhcCCCCCCcEEEEEecCCCCC
Q 005237 423 KSFSEISPILQFANFTCNQALLEA----FEGC-NRIHIIDFDIGY---GGQWASLMQELVFRSEGPPSLKITAFTSSSTH 494 (706)
Q Consensus 423 k~f~e~sP~lkFAhftANQAILEA----~eG~-~rVHIIDFgIg~---G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~ 494 (706)
+.+.++.|-+. ....+|+..++. +... ..-+|+|+|.|. |. +..+++.. . |..+||+|+.+
T Consensus 45 ~~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~~~~~~~---~---p~~~v~~vD~s--- 113 (274)
T 2qe6_A 45 DYACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-THEVAQSV---N---PDARVVYVDID--- 113 (274)
T ss_dssp HHHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HHHHHHHH---C---TTCEEEEEESS---
T ss_pred HHHHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-HHHHHHHh---C---CCCEEEEEECC---
Confidence 44555555443 123344444442 3322 224899999998 73 33333322 1 34799999953
Q ss_pred ChhhHHHHHHHHHHHHHhcCCcEEEEEeeccccccc-CCC---CCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHh-
Q 005237 495 DEFELGFTQENLKHFASEINIPFELEILSLETLISA-SWP---LPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQ- 569 (706)
Q Consensus 495 ~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~-~~~---l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRs- 569 (706)
+.-|..+.+++.. .-..+|....+.+.... ..+ ..+....-.+|+.+..+|.+.. .....+|+.+++
T Consensus 114 -p~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d--~~~~~~l~~~~~~ 185 (274)
T 2qe6_A 114 -PMVLTHGRALLAK-----DPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSP--DVVDRVVGAYRDA 185 (274)
T ss_dssp -HHHHHHHHHHHTT-----CTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCT--TTHHHHHHHHHHH
T ss_pred -hHHHHHHHHhcCC-----CCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCc--HHHHHHHHHHHHh
Confidence 3345555555521 12355555433222100 000 0011112346666766665543 246788888765
Q ss_pred cCCcEEEEee
Q 005237 570 LQPKIVVSLD 579 (706)
Q Consensus 570 L~PkVVVlvE 579 (706)
|+|.-.+++.
T Consensus 186 L~pGG~l~i~ 195 (274)
T 2qe6_A 186 LAPGSYLFMT 195 (274)
T ss_dssp SCTTCEEEEE
T ss_pred CCCCcEEEEE
Confidence 9998665543
No 70
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=76.59 E-value=30 Score=32.24 Aligned_cols=110 Identities=17% Similarity=0.147 Sum_probs=61.1
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FEL 519 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF 519 (706)
..+++.+.-.+.-+|+|+|.|.|. +...|+.+. |..+||+|+.. +..++.+.+++ +..|++ ++|
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~~---~~~~v~~vD~s----~~~~~~a~~~~----~~~~~~~v~~ 94 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSAS----VSIEASNLM---PNGRIFALERN----PQYLGFIRDNL----KKFVARNVTL 94 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCH----HHHHHHHHC---TTSEEEEEECC----HHHHHHHHHHH----HHHTCTTEEE
T ss_pred HHHHHHcCCCCCCEEEEECCCCCH----HHHHHHHHC---CCCEEEEEeCC----HHHHHHHHHHH----HHhCCCcEEE
Confidence 445666665666789999999876 233444432 45699999853 22344444443 444553 444
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
..-.+. +.. .....=++|+++..++ ....+|+.+ +.|+|.-.+++.
T Consensus 95 ~~~d~~--~~~-----~~~~~~D~i~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 95 VEAFAP--EGL-----DDLPDPDRVFIGGSGG-------MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp EECCTT--TTC-----TTSCCCSEEEESCCTT-------CHHHHHHHHHHHCCTTCEEEEE
T ss_pred EeCChh--hhh-----hcCCCCCEEEECCCCc-------CHHHHHHHHHHhcCCCeEEEEE
Confidence 432221 110 0111234666665432 355666665 568998877764
No 71
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=76.15 E-value=42 Score=31.88 Aligned_cols=105 Identities=10% Similarity=0.019 Sum_probs=60.4
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FE 518 (706)
..+++.+.-.+.-.|+|+|.|.|. +...|+.+ ..++|+|+.. +..++.+ .+.++..|++ ++
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-----~~~v~~vD~s----~~~~~~a----~~~~~~~g~~~~v~ 107 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-----GGRAITIEPR----ADRIENI----QKNIDTYGLSPRMR 107 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-----TCEEEEEESC----HHHHHHH----HHHHHHTTCTTTEE
T ss_pred HHHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-----CCEEEEEeCC----HHHHHHH----HHHHHHcCCCCCEE
Confidence 346666665555679999999874 34456655 2489999853 2234333 3445667776 66
Q ss_pred EEEeeccc-ccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 519 LEILSLET-LISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 519 F~~V~les-L~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
|..-.+.+ +.. + ..-++|+++..+ ..+ +|+.+ +.|+|.-.+++.
T Consensus 108 ~~~~d~~~~~~~------~--~~~D~v~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 108 AVQGTAPAALAD------L--PLPEAVFIGGGG--------SQA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp EEESCTTGGGTT------S--CCCSEEEECSCC--------CHH-HHHHHHHHSCTTCEEEEE
T ss_pred EEeCchhhhccc------C--CCCCEEEECCcc--------cHH-HHHHHHHhcCCCcEEEEE
Confidence 65432222 111 1 123566666421 244 66666 568998776664
No 72
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=75.33 E-value=11 Score=36.38 Aligned_cols=107 Identities=18% Similarity=0.085 Sum_probs=60.1
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEI 521 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~ 521 (706)
.+++.+.-.+.-+|+|+|.|.|.-...|.+.+ |..++|+|+.. +..++.+.++ .-.++|..
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s----~~~~~~a~~~--------~~~~~~~~ 84 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSD----DDMLEKAADR--------LPNTNFGK 84 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESC----HHHHHHHHHH--------STTSEEEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECC----HHHHHHHHHh--------CCCcEEEE
Confidence 45565554555689999999887555554443 23479999854 2223333332 22344544
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
..++++. ....=++|+.+..++.+. ....+|+.+ +.|+|...+++.
T Consensus 85 ~d~~~~~--------~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 85 ADLATWK--------PAQKADLLYANAVFQWVP----DHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp CCTTTCC--------CSSCEEEEEEESCGGGST----THHHHHHHHGGGEEEEEEEEEE
T ss_pred CChhhcC--------ccCCcCEEEEeCchhhCC----CHHHHHHHHHHhcCCCeEEEEE
Confidence 3222221 001125777777666542 355677666 788999766653
No 73
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=75.11 E-value=11 Score=34.29 Aligned_cols=106 Identities=17% Similarity=0.168 Sum_probs=59.3
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeeccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLI 528 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~ 528 (706)
+.-.|+|+|.|.|.- ...|+.+. .-++|+|+.. +..++. ..+.++..|++ .+|..-.+.++.
T Consensus 31 ~~~~vLDlGcG~G~~----~~~l~~~~----~~~v~~vD~~----~~~~~~----a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 31 NGGRVLDLFAGSGGL----AIEAVSRG----MSAAVLVEKN----RKAQAI----IQDNIIMTKAENRFTLLKMEAERAI 94 (177)
T ss_dssp CSCEEEEETCTTCHH----HHHHHHTT----CCEEEEECCC----HHHHHH----HHHHHHTTTCGGGEEEECSCHHHHH
T ss_pred CCCeEEEeCCCCCHH----HHHHHHcC----CCEEEEEECC----HHHHHH----HHHHHHHcCCCCceEEEECcHHHhH
Confidence 344799999998853 33455552 3589999853 223333 33445556765 555543222211
Q ss_pred ccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH---HhcCCcEEEEeecCCC
Q 005237 529 SASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV---KQLQPKIVVSLDRSCD 583 (706)
Q Consensus 529 ~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I---RsL~PkVVVlvEqead 583 (706)
+. +. ..=++|+.|.+++. ...+.+++.+ +.|+|.-+++++....
T Consensus 95 ~~-----~~-~~fD~i~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 95 DC-----LT-GRFDLVFLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HH-----BC-SCEEEEEECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred Hh-----hc-CCCCEEEECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 10 00 11257777766531 1235666666 7789998888765443
No 74
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=74.61 E-value=47 Score=32.51 Aligned_cols=108 Identities=17% Similarity=0.145 Sum_probs=58.6
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeeccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLI 528 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~ 528 (706)
+.-.|+|+|.|.|. +...|+.+.. . +||||+.. +..++.+.++ ++..++. ++|..-.+.++.
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~~---~-~v~gvDi~----~~~~~~a~~n----~~~~~~~~~v~~~~~D~~~~~ 112 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRTK---A-KIVGVEIQ----ERLADMAKRS----VAYNQLEDQIEIIEYDLKKIT 112 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTCC---C-EEEEECCS----HHHHHHHHHH----HHHTTCTTTEEEECSCGGGGG
T ss_pred CCCEEEEcCCchhH----HHHHHHHhcC---C-cEEEEECC----HHHHHHHHHH----HHHCCCcccEEEEECcHHHhh
Confidence 35689999999984 4456676632 2 99999853 3334444444 4455664 555543333322
Q ss_pred ccCCCCCCCCCCCceEEEecCcccc----cCCC------------CCHHHHHHHH-HhcCCcEEEEee
Q 005237 529 SASWPLPLQGLENDVTAVNLPIGVF----SNYP------------ATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 529 ~~~~~l~Lr~~~dEaLAVN~~~~~l----~~~p------------~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
. .+....=++|+.|-++... ...+ ..++.+++.+ +-|+|.-.+++.
T Consensus 113 ~-----~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 113 D-----LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp G-----TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred h-----hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 1 0111123688888775322 0000 1134566665 678998877764
No 75
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=74.54 E-value=7.9 Score=36.64 Aligned_cols=118 Identities=14% Similarity=0.095 Sum_probs=61.8
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFELE 520 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFEF~ 520 (706)
..++.+.-...-+|+|+|.|.|.- ...|+.+ -|..++|||+... ..++.+.++..+-++..++ .++|.
T Consensus 18 ~~~~~l~~~~~~~vLDiGcG~G~~----~~~la~~---~p~~~v~gvD~s~----~~l~~~~~~a~~~~~~~~~~~v~~~ 86 (218)
T 3mq2_A 18 AEFEQLRSQYDDVVLDVGTGDGKH----PYKVARQ---NPSRLVVALDADK----SRMEKISAKAAAKPAKGGLPNLLYL 86 (218)
T ss_dssp HHHHHHHTTSSEEEEEESCTTCHH----HHHHHHH---CTTEEEEEEESCG----GGGHHHHHHHTSCGGGTCCTTEEEE
T ss_pred HHHHHhhccCCCEEEEecCCCCHH----HHHHHHH---CCCCEEEEEECCH----HHHHHHHHHHHHhhhhcCCCceEEE
Confidence 344555556677899999998853 3344443 2467999999642 2233333333333334555 45665
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCccccc--CCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFS--NYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~--~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
...++++. +.... +.+.++++..... ..+.. ..+|+.+ |.|+|...+++.
T Consensus 87 ~~d~~~l~-------~~~~~-d~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 87 WATAERLP-------PLSGV-GELHVLMPWGSLLRGVLGSS-PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp ECCSTTCC-------SCCCE-EEEEEESCCHHHHHHHHTSS-SHHHHHHHHTEEEEEEEEEE
T ss_pred ecchhhCC-------CCCCC-CEEEEEccchhhhhhhhccH-HHHHHHHHHHcCCCcEEEEE
Confidence 43333221 11112 4455555432211 11122 4566655 679999888774
No 76
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=73.37 E-value=27 Score=32.26 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=53.8
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEEEEEeeccccccc
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFELEILSLETLISA 530 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFEF~~V~lesL~~~ 530 (706)
-.|+|+|.|.|. +...|+.+-+ |.-++|+|+.. +..++.+.++ ++..|+ .++|....++++...
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~s----~~~~~~a~~~----~~~~~~~~~v~~~~~d~~~~~~~ 89 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDIQ----DKAIANTTKK----LTDLNLIDRVTLIKDGHQNMDKY 89 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECSC----HHHHHHHHHH----HHHTTCGGGEEEECSCGGGGGGT
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEECC----HHHHHHHHHH----HHHcCCCCCeEEEECCHHHHhhh
Confidence 479999999984 3333443311 22399999853 2234444444 445566 456554433333210
Q ss_pred CCCCCCCCCCCceEEEecCcc-----cccCCCCCHHHHHHH-HHhcCCcEEEEe
Q 005237 531 SWPLPLQGLENDVTAVNLPIG-----VFSNYPATFPLVLRF-VKQLQPKIVVSL 578 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~-----~l~~~p~~~~~vL~~-IRsL~PkVVVlv 578 (706)
+. ..=++|+.|.++. .+...+.....+|+. .+.|+|.-.+++
T Consensus 90 -----~~-~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 90 -----ID-CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp -----CC-SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -----cc-CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 11 1225777786541 111111112234544 467899876654
No 77
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=73.24 E-value=21 Score=33.91 Aligned_cols=109 Identities=20% Similarity=0.160 Sum_probs=59.2
Q ss_pred HHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEe
Q 005237 443 LLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEIL 522 (706)
Q Consensus 443 ILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V 522 (706)
|++.+... -.|+|+|.|.|. +...|+.+ .++|+|+.. +..++.+.+++ +..+...+|...
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s----~~~~~~a~~~~----~~~~~~~~~~~~ 86 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLS----EEMLEIAQEKA----METNRHVDFWVQ 86 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESC----HHHHHHHHHHH----HHTTCCCEEEEC
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECC----HHHHHHHHHhh----hhcCCceEEEEc
Confidence 44444432 579999999885 44556654 589999854 22344444443 334555565543
Q ss_pred ecccccccCCCCCCCCCCCceEEEec-CcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 523 SLETLISASWPLPLQGLENDVTAVNL-PIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 523 ~lesL~~~~~~l~Lr~~~dEaLAVN~-~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
.+.++. +. ..=++|+++. .++.+.. +.....+|+.+ +.|+|.-+++++-
T Consensus 87 d~~~~~-------~~-~~fD~v~~~~~~~~~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 87 DMRELE-------LP-EPVDAITILCDSLNYLQT-EADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp CGGGCC-------CS-SCEEEEEECTTGGGGCCS-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhcC-------CC-CCcCEEEEeCCchhhcCC-HHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 332221 11 1224565554 4443321 12345566665 6789998887743
No 78
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=72.71 E-value=28 Score=33.39 Aligned_cols=102 Identities=14% Similarity=0.175 Sum_probs=55.8
Q ss_pred CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccc
Q 005237 450 CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLIS 529 (706)
Q Consensus 450 ~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~ 529 (706)
.+.-+|+|+|.|.|.- ...|+.+ + .++|||+.. +..++.+.+++ +...-.++|....++++
T Consensus 38 ~~~~~vLDiG~G~G~~----~~~l~~~-~----~~v~~vD~s----~~~~~~a~~~~----~~~~~~~~~~~~d~~~~-- 98 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRI----ALPLIAR-G----YRYIALDAD----AAMLEVFRQKI----AGVDRKVQVVQADARAI-- 98 (263)
T ss_dssp SSCCEEEEETCTTSTT----HHHHHTT-T----CEEEEEESC----HHHHHHHHHHT----TTSCTTEEEEESCTTSC--
T ss_pred CCCCEEEEeCCcCCHH----HHHHHHC-C----CEEEEEECC----HHHHHHHHHHh----hccCCceEEEEcccccC--
Confidence 3456899999999863 2345544 2 489999854 22333333333 22233456654332222
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
.+....=++|+.+..++.+. ....+|+.+ +.|+|...+++.
T Consensus 99 -----~~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 99 -----PLPDESVHGVIVVHLWHLVP----DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -----CSCTTCEEEEEEESCGGGCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCCCCeeEEEECCchhhcC----CHHHHHHHHHHHCCCCcEEEEE
Confidence 11111125677776665442 245666665 678998776654
No 79
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=72.34 E-value=27 Score=32.47 Aligned_cols=98 Identities=15% Similarity=0.047 Sum_probs=55.3
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEEEeecccccccC
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELEILSLETLISAS 531 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~~V~lesL~~~~ 531 (706)
-+|+|+|.|.|.--..|.+.+ |..++|+|+.. +..++ .+.+.++..+++ ++|....++++..
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s----~~~~~----~a~~~~~~~~~~~v~~~~~d~~~~~~-- 129 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSL----GKRVR----FLRQVQHELKLENIEPVQSRVEEFPS-- 129 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESC----HHHHH----HHHHHHHHTTCSSEEEEECCTTTSCC--
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCC----HHHHH----HHHHHHHHcCCCCeEEEecchhhCCc--
Confidence 489999999997554444432 34689999854 22233 333444556765 6665433322211
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeecC
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDRS 581 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEqe 581 (706)
...=++|+.|.. .....+|+.+ +.|+|.-+++++.+
T Consensus 130 ------~~~~D~i~~~~~--------~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 130 ------EPPFDGVISRAF--------ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ------CSCEEEEECSCS--------SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred ------cCCcCEEEEecc--------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 011134444421 2356777776 56899988887743
No 80
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=72.09 E-value=45 Score=31.50 Aligned_cols=110 Identities=18% Similarity=0.178 Sum_probs=59.1
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELE 520 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~ 520 (706)
..|++.+...+.-+|+|+|.|.|. +...|+.+ +. -++|+|+.. +..++.+.+++.. -.++|.
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s----~~~~~~a~~~~~~------~~~~~~ 94 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLS----EKMLARARAAGPD------TGITYE 94 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESC----HHHHHHHHHTSCS------SSEEEE
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCC----HHHHHHHHHhccc------CCceEE
Confidence 456666665566789999999885 34455555 21 289999854 2223332222211 134444
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
...++++. +....=++|+.+..++.+. ....+|+.+ +.|+|.-++++.
T Consensus 95 ~~d~~~~~-------~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 95 RADLDKLH-------LPQDSFDLAYSSLALHYVE----DVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp ECCGGGCC-------CCTTCEEEEEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcChhhcc-------CCCCCceEEEEeccccccc----hHHHHHHHHHHhcCcCcEEEEE
Confidence 43222221 1111124666666555442 355666665 678998766653
No 81
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=71.18 E-value=38 Score=31.48 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=58.5
Q ss_pred HHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEE
Q 005237 440 NQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFEL 519 (706)
Q Consensus 440 NQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF 519 (706)
...|++.+. .+.-+|+|+|.|.|. +...|+.+ + .++|+|+.. + ...+.|+.... +|
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G~----~~~~l~~~--~---~~~~~~D~~----~--------~~~~~~~~~~~--~~ 77 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSGA----LGAAIKEN--G---TRVSGIEAF----P--------EAAEQAKEKLD--HV 77 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTSH----HHHHHHTT--T---CEEEEEESS----H--------HHHHHHHTTSS--EE
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCCH----HHHHHHhc--C---CeEEEEeCC----H--------HHHHHHHHhCC--cE
Confidence 355666665 566799999998873 55666766 2 589999854 1 22233443322 33
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
....++++. ..+....=++|+.+..++.+. ....+|+.+ +.|+|.-.+++.
T Consensus 78 ~~~d~~~~~-----~~~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 78 VLGDIETMD-----MPYEEEQFDCVIFGDVLEHLF----DPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp EESCTTTCC-----CCSCTTCEEEEEEESCGGGSS----CHHHHHHHTGGGEEEEEEEEEE
T ss_pred EEcchhhcC-----CCCCCCccCEEEECChhhhcC----CHHHHHHHHHHHcCCCCEEEEE
Confidence 332222111 112111224666665555442 245677776 568998766553
No 82
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=70.86 E-value=57 Score=30.04 Aligned_cols=98 Identities=15% Similarity=0.046 Sum_probs=52.6
Q ss_pred EEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccCCC
Q 005237 454 HIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISASWP 533 (706)
Q Consensus 454 HIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~~~ 533 (706)
.|+|+|.|.|. +...|+.+ + .++|+|+.. +..++.+.+++ +..++.++|....+.++.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~-~----~~v~~vD~s----~~~~~~a~~~~----~~~~~~~~~~~~d~~~~~----- 89 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL-G----YEVTAVDQS----SVGLAKAKQLA----QEKGVKITTVQSNLADFD----- 89 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT-T----CEEEEECSS----HHHHHHHHHHH----HHHTCCEEEECCBTTTBS-----
T ss_pred CEEEECCCCCH----hHHHHHhC-C----CeEEEEECC----HHHHHHHHHHH----HhcCCceEEEEcChhhcC-----
Confidence 89999998875 34556654 2 389999853 22344444433 334556666543332221
Q ss_pred CCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 534 LPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 534 l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
+....=++|+.++. + + .+.....+|+.+ +.|+|.-++++.
T Consensus 90 --~~~~~fD~v~~~~~-~-~--~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 90 --IVADAWEGIVSIFC-H-L--PSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp --CCTTTCSEEEEECC-C-C--CHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred --CCcCCccEEEEEhh-c-C--CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 11112245555432 1 1 112345666665 678998777654
No 83
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=70.72 E-value=17 Score=34.79 Aligned_cols=113 Identities=15% Similarity=0.205 Sum_probs=60.0
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELE 520 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~ 520 (706)
..+++.+...+.-+|+|+|.|.|.--..|.+.. ..++|+|+.. +..++.+.+++.. . -..+|.
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--------~~~v~~vD~s----~~~~~~a~~~~~~----~-~~~~~~ 145 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--------YATTDLLEPV----KHMLEEAKRELAG----M-PVGKFI 145 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--------CSEEEEEESC----HHHHHHHHHHTTT----S-SEEEEE
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--------cCEEEEEeCC----HHHHHHHHHHhcc----C-CceEEE
Confidence 566666665667799999999986333333322 2379999853 2233333333322 1 234444
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
...++++. +....=++|+.+..++.+.. .....+|+.+ +.|+|.-++++.
T Consensus 146 ~~d~~~~~-------~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 146 LASMETAT-------LPPNTYDLIVIQWTAIYLTD--ADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp ESCGGGCC-------CCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EccHHHCC-------CCCCCeEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEEE
Confidence 43222221 11112246666665554421 1245666655 678998876654
No 84
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=70.65 E-value=13 Score=34.64 Aligned_cols=110 Identities=15% Similarity=0.073 Sum_probs=60.3
Q ss_pred HHHHHHHHHhhc--cCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcC
Q 005237 437 FTCNQALLEAFE--GCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEIN 514 (706)
Q Consensus 437 ftANQAILEA~e--G~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lg 514 (706)
......+++.+. -.+.-.|+|+|.|.|. +...|+.++ ..++|+|+.. +..++.+. +.++..+
T Consensus 44 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~~~v~~vD~s----~~~~~~a~----~~~~~~~ 107 (205)
T 3grz_A 44 HQTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKLG----AKSVLATDIS----DESMTAAE----ENAALNG 107 (205)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHTT----CSEEEEEESC----HHHHHHHH----HHHHHTT
T ss_pred CccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHCC----CCEEEEEECC----HHHHHHHH----HHHHHcC
Confidence 344455666655 2345689999999984 334466542 4589999854 22333333 3445556
Q ss_pred Cc-EEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 515 IP-FELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 515 Vp-FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
+. ++|....+.+. .. ..=++|+.|.+++. +..+|+.+ +.|+|.-.+++
T Consensus 108 ~~~v~~~~~d~~~~--------~~-~~fD~i~~~~~~~~-------~~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 108 IYDIALQKTSLLAD--------VD-GKFDLIVANILAEI-------LLDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp CCCCEEEESSTTTT--------CC-SCEEEEEEESCHHH-------HHHHGGGSGGGEEEEEEEEE
T ss_pred CCceEEEecccccc--------CC-CCceEEEECCcHHH-------HHHHHHHHHHhcCCCCEEEE
Confidence 65 55544322111 10 12246666754432 34455554 56889877665
No 85
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=70.38 E-value=12 Score=37.23 Aligned_cols=124 Identities=16% Similarity=0.183 Sum_probs=69.5
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccCC
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISASW 532 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~~ 532 (706)
=+|+|+|.|.| .|--.++.+ .|..+++++|.. +..++.++ +.|+..|+..+++..... +.
T Consensus 51 ~~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~----~~~leiar----~~~~~~g~~~~v~~~d~~--~~--- 110 (200)
T 3fzg_A 51 SSILDFGCGFN----PLALYQWNE---NEKIIYHAYDID----RAEIAFLS----SIIGKLKTTIKYRFLNKE--SD--- 110 (200)
T ss_dssp SEEEEETCTTH----HHHHHHHCS---SCCCEEEEECSC----HHHHHHHH----HHHHHSCCSSEEEEECCH--HH---
T ss_pred CeEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCC----HHHHHHHH----HHHHhcCCCccEEEeccc--cc---
Confidence 37899997765 343444433 345599999854 33344444 446778888655553221 11
Q ss_pred CCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEeec--CCCCCCCChHHHHHHHHHHHHHHhhhhhc
Q 005237 533 PLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLDR--SCDRPDFPFAHHMVHALQSYSGLLESLDS 609 (706)
Q Consensus 533 ~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvEq--eadhns~~F~~RF~EAL~yYsAlFDSLDa 609 (706)
....+-++|..+..+|.+.+.. ..+.+.++.|+|..+++.=. -...-++-+.++ |+..|+..=+
T Consensus 111 ---~~~~~~DvVLa~k~LHlL~~~~---~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~-------Y~~~~~~~~~ 176 (200)
T 3fzg_A 111 ---VYKGTYDVVFLLKMLPVLKQQD---VNILDFLQLFHTQNFVISFPIKSLSGKEKGMEEN-------YQLWFESFTK 176 (200)
T ss_dssp ---HTTSEEEEEEEETCHHHHHHTT---CCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCC-------HHHHHHHHTT
T ss_pred ---CCCCCcChhhHhhHHHhhhhhH---HHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhh-------HHHHHHHhcc
Confidence 0111225666666677773322 34557788999988887533 222223344444 7777776644
No 86
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=70.36 E-value=18 Score=37.20 Aligned_cols=135 Identities=12% Similarity=0.055 Sum_probs=70.4
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc-CCcEEEEEeeccc-ccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI-NIPFELEILSLET-LIS 529 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l-gVpFEF~~V~les-L~~ 529 (706)
.-+|+|+|.|.|. +...|+++. |.-+||+|+.. +.-++.+.+++...+..+ +-.+++..-...+ +..
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid----~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~ 164 (304)
T 2o07_A 96 PRKVLIIGGGDGG----VLREVVKHP---SVESVVQCEID----EDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ 164 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHTTCT---TCCEEEEEESC----HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT
T ss_pred CCEEEEECCCchH----HHHHHHHcC---CCCEEEEEECC----HHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh
Confidence 3579999998875 455666552 46799999853 334566666666554433 2234444321111 111
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhhh
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLESL 607 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEqeadhns~~F~~RF~EAL~yYsAlFDSL 607 (706)
....=++|+++...+...........+++.+ +.|+|.-+++++.++.... .+.+.....+...+|...
T Consensus 165 -------~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~~~~~l~~~f~~v 233 (304)
T 2o07_A 165 -------NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH---LDLIKEMRQFCQSLFPVV 233 (304)
T ss_dssp -------CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTC---HHHHHHHHHHHHHHCSEE
T ss_pred -------CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccc---hHHHHHHHHHHHHhCCCc
Confidence 0012257888865321100000124566665 6889999998876543222 233334444555666544
No 87
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=70.26 E-value=23 Score=36.78 Aligned_cols=114 Identities=17% Similarity=0.075 Sum_probs=63.1
Q ss_pred HHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--E
Q 005237 440 NQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--F 517 (706)
Q Consensus 440 NQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--F 517 (706)
.++|++.+.-.+.-+|+|+|.|.|. |...++.+. .-++|||+.. + .+..+ .+.++..|+. .
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s----~-~~~~a----~~~~~~~~l~~~v 101 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAS----T-MAQHA----EVLVKSNNLTDRI 101 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECS----T-HHHHH----HHHHHHTTCTTTE
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCH----H-HHHHH----HHHHHHcCCCCcE
Confidence 3677777765566699999998885 445566542 3599999863 1 22323 3333445553 5
Q ss_pred EEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEee
Q 005237 518 ELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLD 579 (706)
Q Consensus 518 EF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvE 579 (706)
+|..-.++++. +. ..=++|+.+.++..+.. +...+.+...-+.|+|..+++.+
T Consensus 102 ~~~~~d~~~~~-------~~-~~~D~Ivs~~~~~~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 102 VVIPGKVEEVS-------LP-EQVDIIISEPMGYMLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEESCTTTCC-------CS-SCEEEEEECCCBTTBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEEcchhhCC-------CC-CceeEEEEeCchhcCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 55433222221 11 11246666655433322 22234444555789999888754
No 88
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=68.57 E-value=42 Score=31.90 Aligned_cols=99 Identities=14% Similarity=0.011 Sum_probs=54.9
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcC--CcEEEEEeeccccccc
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEIN--IPFELEILSLETLISA 530 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lg--VpFEF~~V~lesL~~~ 530 (706)
-.|+|+|.|.|. +...|+. +..++|||+.. +..++.+.+++ +..+ -.++|....+.++...
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s----~~~~~~a~~~~----~~~~~~~~v~~~~~d~~~~~~~ 130 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDIS----ESALAKANETY----GSSPKAEYFSFVKEDVFTWRPT 130 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSC----HHHHHHHHHHH----TTSGGGGGEEEECCCTTTCCCS
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECC----HHHHHHHHHHh----hccCCCcceEEEECchhcCCCC
Confidence 499999999884 3345553 35689999854 22344444433 2222 2355554333222110
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHH-hcCCcEEEEe
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVK-QLQPKIVVSL 578 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IR-sL~PkVVVlv 578 (706)
..=++|+.+..++.+. +..+..+|+.++ .|+|...+++
T Consensus 131 --------~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 131 --------ELFDLIFDYVFFCAIE--PEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp --------SCEEEEEEESSTTTSC--GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred --------CCeeEEEEChhhhcCC--HHHHHHHHHHHHHHCCCCcEEEE
Confidence 0124666665555442 234667777775 5999887765
No 89
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=68.22 E-value=22 Score=33.54 Aligned_cols=106 Identities=15% Similarity=0.068 Sum_probs=56.2
Q ss_pred HHHHHhhcc-CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEE
Q 005237 441 QALLEAFEG-CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFEL 519 (706)
Q Consensus 441 QAILEA~eG-~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF 519 (706)
+.|++.+.. .+.-+|+|+|.|.|. +...|+.+ ++ ++|||+.. +..++.+.+++.. .++|
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s----~~~~~~a~~~~~~-------~v~~ 90 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--FN---DITCVEAS----EEAISHAQGRLKD-------GITY 90 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--CS---CEEEEESC----HHHHHHHHHHSCS-------CEEE
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCC----HHHHHHHHHhhhC-------CeEE
Confidence 334455442 233469999999885 45566644 22 79999854 2223333332211 4455
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHH--hcCCcEEEEe
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVK--QLQPKIVVSL 578 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IR--sL~PkVVVlv 578 (706)
....++++.. -..=++|+.+..++.+. ....+|+.++ -|+|.-.+++
T Consensus 91 ~~~d~~~~~~--------~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 91 IHSRFEDAQL--------PRRYDNIVLTHVLEHID----DPVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp EESCGGGCCC--------SSCEEEEEEESCGGGCS----SHHHHHHHHHHTTEEEEEEEEE
T ss_pred EEccHHHcCc--------CCcccEEEEhhHHHhhc----CHHHHHHHHHHHhcCCCCEEEE
Confidence 4433332210 01114666666665442 2467777765 7899876655
No 90
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=67.93 E-value=29 Score=31.33 Aligned_cols=108 Identities=11% Similarity=0.118 Sum_probs=54.2
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELE 520 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~ 520 (706)
..+++.+-. +.-+|+|+|.|.|. +...|+.+ + .++|+|+.. +..++.+.+++ -..+|.
T Consensus 37 ~~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~~----~~~~~~a~~~~--------~~~~~~ 94 (195)
T 3cgg_A 37 ARLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDLD----PILIDYAKQDF--------PEARWV 94 (195)
T ss_dssp HHHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEESC----HHHHHHHHHHC--------TTSEEE
T ss_pred HHHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcCC----HHHHHHHHHhC--------CCCcEE
Confidence 345555533 44589999999876 34455555 2 389999853 22333333332 123443
Q ss_pred EeecccccccCCCCCCCCCCCceEEEe-cCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVN-LPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN-~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
...+.++ .+....=++|+.+ ..++.+. +.....+|+.+ +.|+|.-++++.
T Consensus 95 ~~d~~~~-------~~~~~~~D~i~~~~~~~~~~~--~~~~~~~l~~~~~~l~~~G~l~~~ 146 (195)
T 3cgg_A 95 VGDLSVD-------QISETDFDLIVSAGNVMGFLA--EDGREPALANIHRALGADGRAVIG 146 (195)
T ss_dssp ECCTTTS-------CCCCCCEEEEEECCCCGGGSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcccccC-------CCCCCceeEEEECCcHHhhcC--hHHHHHHHHHHHHHhCCCCEEEEE
Confidence 3222211 1111112455555 2333221 11234566554 678998877764
No 91
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=67.79 E-value=26 Score=35.28 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=59.6
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHh----cCCcEEEEEeeccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASE----INIPFELEILSLET 526 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~----lgVpFEF~~V~les 526 (706)
+.-+|+|+|.|.|.- ...|+.++ .-++|+|+.. +..++.+.+++...... ....++|....+++
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s----~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 101 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIA----DVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSK 101 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESC----HHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTT
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCC----HHHHHHHHHHHHHhhhcccccccceEEEEEecccc
Confidence 556899999998873 33444432 3489999854 23455555555443210 11234454433332
Q ss_pred ccccCCCCCCCCC--CCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 527 LISASWPLPLQGL--ENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 527 L~~~~~~l~Lr~~--~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
+.. ...+... .=++|+.+..+|.+...+.....+|+.+ +.|+|.-++++.
T Consensus 102 ~~~---~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 102 ELL---IDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp SCS---TTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cch---hhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 210 0012111 1257777776654412112245677776 678999877753
No 92
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=67.26 E-value=55 Score=30.80 Aligned_cols=111 Identities=13% Similarity=0.131 Sum_probs=58.9
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEEEEEeecccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFELEILSLETLIS 529 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFEF~~V~lesL~~ 529 (706)
+.-.|+|+|.|.|.- ...||.+. |..++|||+.. +..++.+.++ ++..|+ .++|..-.+.++..
T Consensus 41 ~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~gvD~s----~~~l~~a~~~----~~~~~~~~v~~~~~d~~~~~~ 105 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAF----VSGMAKQN---PDINYIGIDIQ----KSVLSYALDK----VLEVGVPNIKLLWVDGSDLTD 105 (214)
T ss_dssp CCCEEEEESCTTSHH----HHHHHHHC---TTSEEEEEESC----HHHHHHHHHH----HHHHCCSSEEEEECCSSCGGG
T ss_pred CCCeEEEEccCcCHH----HHHHHHHC---CCCCEEEEEcC----HHHHHHHHHH----HHHcCCCCEEEEeCCHHHHHh
Confidence 345699999998853 33444432 35799999853 2234444444 344455 35554433322211
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCC----CCCHHHHHHHHH-hcCCcEEEEeecC
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNY----PATFPLVLRFVK-QLQPKIVVSLDRS 581 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~----p~~~~~vL~~IR-sL~PkVVVlvEqe 581 (706)
.+....=+.|++|++....... ....+.+|+.++ .|+|..+++++-+
T Consensus 106 -----~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 106 -----YFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp -----TSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred -----hcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 0111122578888764211000 001256777764 5999988877543
No 93
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=67.05 E-value=38 Score=34.28 Aligned_cols=110 Identities=14% Similarity=0.069 Sum_probs=59.6
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeecccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLIS 529 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~~ 529 (706)
.-.|+|+|.|.|.- .-.|+.+ |..++|||+.. +..++.+.++ ++..|+. ++|..-.+.+...
T Consensus 124 ~~~vLDlG~GsG~~----~~~la~~----~~~~v~~vDis----~~al~~A~~n----~~~~~l~~~v~~~~~D~~~~~~ 187 (284)
T 1nv8_A 124 IKTVADIGTGSGAI----GVSVAKF----SDAIVFATDVS----SKAVEIARKN----AERHGVSDRFFVRKGEFLEPFK 187 (284)
T ss_dssp CCEEEEESCTTSHH----HHHHHHH----SSCEEEEEESC----HHHHHHHHHH----HHHTTCTTSEEEEESSTTGGGG
T ss_pred CCEEEEEeCchhHH----HHHHHHC----CCCEEEEEECC----HHHHHHHHHH----HHHcCCCCceEEEECcchhhcc
Confidence 34799999999853 3444444 46799999854 2345444444 4556774 6665432221100
Q ss_pred cCCCCCCCCCCCceEEEecCcccccC--------CC--------CCHHHHHHHH-HhcCCcEEEEeecCCC
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSN--------YP--------ATFPLVLRFV-KQLQPKIVVSLDRSCD 583 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~--------~p--------~~~~~vL~~I-RsL~PkVVVlvEqead 583 (706)
. ....-++|+.|-|...... .| ..+..+-+.+ +.++|.-++++|-+.+
T Consensus 188 ~------~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 188 E------KFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp G------GTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred c------ccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 0 1111167888865421110 01 1223333445 6888998888876543
No 94
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=67.03 E-value=21 Score=37.16 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=58.4
Q ss_pred HHHHHhhcc-CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEE
Q 005237 441 QALLEAFEG-CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFEL 519 (706)
Q Consensus 441 QAILEA~eG-~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF 519 (706)
..|++.+.+ .+.-+|+|+|.|.|. +...|+.+. |.+++|+++.+ .-+ +.|+... ..+|
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~-----~~~--------~~a~~~~-~v~~ 256 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDLP-----QVI--------ENAPPLS-GIEH 256 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-----HHH--------TTCCCCT-TEEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeChH-----HHH--------HhhhhcC-CCEE
Confidence 567777652 345789999999885 344555443 46799999853 111 1222221 2444
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE-eec
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS-LDR 580 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl-vEq 580 (706)
..-.+ .++ +. +-++|+.+..+|.+.. .....+|+.+ +.|+|.-.++ +|.
T Consensus 257 ~~~d~--~~~------~~--~~D~v~~~~~lh~~~d--~~~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 257 VGGDM--FAS------VP--QGDAMILKAVCHNWSD--EKCIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp EECCT--TTC------CC--CEEEEEEESSGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeCCc--ccC------CC--CCCEEEEecccccCCH--HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 43221 111 11 1357777766664422 1123677776 5789987554 443
No 95
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=66.72 E-value=27 Score=35.75 Aligned_cols=112 Identities=8% Similarity=0.073 Sum_probs=60.6
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcC-CcEEEEEeeccccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEIN-IPFELEILSLETLISA 530 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lg-VpFEF~~V~lesL~~~ 530 (706)
.-.|+|+|.|.|. +...|+++ ++..+||+|+.. +.-++.+.+++..+++.++ -.++|..-...++...
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid----~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 164 (304)
T 3bwc_A 96 PERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDID----GEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQ 164 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHHTC---TTCCEEEEEESC----HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHS
T ss_pred CCeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEECC----HHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHh
Confidence 3579999998885 45666654 345699999853 3345666666665554432 2355543222111110
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCH--HHHHHHH-HhcCCcEEEEeecC
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATF--PLVLRFV-KQLQPKIVVSLDRS 581 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~--~~vL~~I-RsL~PkVVVlvEqe 581 (706)
.....=++|++|....... ...+ ..+|+.+ +.|+|.-++++..+
T Consensus 165 -----~~~~~fDvIi~d~~~~~~~--~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 165 -----TPDNTYDVVIIDTTDPAGP--ASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp -----SCTTCEEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -----ccCCceeEEEECCCCcccc--chhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 0011225788886543210 0111 4666665 68999988887644
No 96
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=66.59 E-value=15 Score=37.31 Aligned_cols=111 Identities=13% Similarity=-0.008 Sum_probs=58.0
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELE 520 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~ 520 (706)
..|++.+.-...-+|+|+|.|.|. +-..|+.+ + -+||||+.+ +.-++.+.+++. ...+...+.
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S----~~ml~~Ar~~~~----~~~v~~~~~ 97 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFS----QRMCDDLAEALA----DRCVTIDLL 97 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESC----HHHHHHHHHHTS----SSCCEEEEC
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECC----HHHHHHHHHHHH----hccceeeee
Confidence 456666655556789999999886 44556655 2 389999864 223443333332 222332222
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
+++... ...+. ..=++|+.|..++.+.. .....+|+.+ +.| |.-.+++
T Consensus 98 -----~~~~~~-~~~~~-~~fD~Vv~~~~l~~~~~--~~~~~~l~~l~~lL-PGG~l~l 146 (261)
T 3iv6_A 98 -----DITAEI-PKELA-GHFDFVLNDRLINRFTT--EEARRACLGMLSLV-GSGTVRA 146 (261)
T ss_dssp -----CTTSCC-CGGGT-TCCSEEEEESCGGGSCH--HHHHHHHHHHHHHH-TTSEEEE
T ss_pred -----eccccc-ccccC-CCccEEEEhhhhHhCCH--HHHHHHHHHHHHhC-cCcEEEE
Confidence 222100 00011 12357777776665422 2244555555 456 9877664
No 97
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=66.37 E-value=10 Score=33.79 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=55.3
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISAS 531 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~ 531 (706)
.-+|+|+|.|.|. +...|+.+ ++ . +|||+.. +..++.+.+++ +..++..+|..-.+.+....
T Consensus 42 ~~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~~----~~~~~~a~~~~----~~~~~~~~~~~~d~~~~~~~- 103 (171)
T 1ws6_A 42 RGRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEKD----PEAVRLLKENV----RRTGLGARVVALPVEVFLPE- 103 (171)
T ss_dssp CCEEEEETCSSCH----HHHHHHHT--TC-E--EEEECCC----HHHHHHHHHHH----HHHTCCCEEECSCHHHHHHH-
T ss_pred CCeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeCC----HHHHHHHHHHH----HHcCCceEEEeccHHHHHHh-
Confidence 3479999999985 44455544 22 2 9999853 22344444443 33455444443322221110
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH---HhcCCcEEEEeecCC
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV---KQLQPKIVVSLDRSC 582 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I---RsL~PkVVVlvEqea 582 (706)
..-....=++|+.|.+++ . ..+.+++.+ +.|+|.-+++++-..
T Consensus 104 --~~~~~~~~D~i~~~~~~~--~----~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 104 --AKAQGERFTVAFMAPPYA--M----DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp --HHHTTCCEEEEEECCCTT--S----CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred --hhccCCceEEEEECCCCc--h----hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 000000125777776654 1 234556655 569999888776543
No 98
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=65.90 E-value=41 Score=33.89 Aligned_cols=134 Identities=11% Similarity=0.070 Sum_probs=73.2
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEEEEEeeccc-ccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFELEILSLET-LIS 529 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFEF~~V~les-L~~ 529 (706)
.-+|+|+|.|.|. +..+++++. +.-+||+|+.. +.-++.+.+++.+++..++- .+++..-...+ +..
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vEid----~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~ 144 (275)
T 1iy9_A 76 PEHVLVVGGGDGG----VIREILKHP---SVKKATLVDID----GKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK 144 (275)
T ss_dssp CCEEEEESCTTCH----HHHHHTTCT---TCSEEEEEESC----HHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT
T ss_pred CCEEEEECCchHH----HHHHHHhCC---CCceEEEEECC----HHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh
Confidence 4579999999884 455666553 35699999843 44466667777665443321 34444321111 111
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCC--HHHHHHHH-HhcCCcEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhh
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPAT--FPLVLRFV-KQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLES 606 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~--~~~vL~~I-RsL~PkVVVlvEqeadhns~~F~~RF~EAL~yYsAlFDS 606 (706)
....=++|+++...... .+.. ...+++.+ +.|+|.-++++..++-.. -...+.+.+.....+|..
T Consensus 145 -------~~~~fD~Ii~d~~~~~~--~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~---~~~~~~~~~~~l~~~F~~ 212 (275)
T 1iy9_A 145 -------SENQYDVIMVDSTEPVG--PAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWF---TPELITNVQRDVKEIFPI 212 (275)
T ss_dssp -------CCSCEEEEEESCSSCCS--CCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTT---CHHHHHHHHHHHHTTCSE
T ss_pred -------CCCCeeEEEECCCCCCC--cchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc---cHHHHHHHHHHHHHhCCC
Confidence 00123678887654211 0111 24666655 689999999887542111 145555555555555654
Q ss_pred hh
Q 005237 607 LD 608 (706)
Q Consensus 607 LD 608 (706)
..
T Consensus 213 v~ 214 (275)
T 1iy9_A 213 TK 214 (275)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 99
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=64.34 E-value=73 Score=28.46 Aligned_cols=105 Identities=19% Similarity=0.204 Sum_probs=56.6
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFEL 519 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFEF 519 (706)
.+++.+.-.+.-+|+|+|.|.|. +...|+.+. .++|+|+.. +..++.+.++ ++..++ .++|
T Consensus 24 ~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~----~~~~~~a~~~----~~~~~~~~~~~~ 86 (192)
T 1l3i_A 24 LIMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRN----PEAISTTEMN----LQRHGLGDNVTL 86 (192)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESC----HHHHHHHHHH----HHHTTCCTTEEE
T ss_pred HHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECC----HHHHHHHHHH----HHHcCCCcceEE
Confidence 44555554555689999998874 334455433 589999853 2234444333 344565 4555
Q ss_pred EEeeccc-ccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 520 EILSLET-LISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 520 ~~V~les-L~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
....+.+ +.. + ..=++|+++..++ ....+|+.+ +.|+|.-++++
T Consensus 87 ~~~d~~~~~~~------~--~~~D~v~~~~~~~-------~~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 87 MEGDAPEALCK------I--PDIDIAVVGGSGG-------ELQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp EESCHHHHHTT------S--CCEEEEEESCCTT-------CHHHHHHHHHHTEEEEEEEEE
T ss_pred EecCHHHhccc------C--CCCCEEEECCchH-------HHHHHHHHHHHhcCCCcEEEE
Confidence 4432222 111 1 1224555554322 345677666 56899866655
No 100
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=64.27 E-value=19 Score=37.00 Aligned_cols=135 Identities=12% Similarity=0.097 Sum_probs=70.0
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHh-cC-CcEEEEEeecccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASE-IN-IPFELEILSLETLIS 529 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~-lg-VpFEF~~V~lesL~~ 529 (706)
.-+|+|+|.|-|. +..+|+++ ++.-+||+|+.. +.-++.+.+++...... ++ -.++|..- +..+-
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~V~~VDid----~~vi~~ar~~~~~~~~~~~~~~rv~~~~~--D~~~~ 150 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRH---KNVESITMVEID----AGVVSFCRQYLPNHNAGSYDDPRFKLVID--DGVNF 150 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTC---TTCCEEEEECSC----TTHHHHHHHHCHHHHSSCTTCTTCCEECS--CSCC-
T ss_pred CCEEEEEeCChhH----HHHHHHhC---CCCCEEEEEECC----HHHHHHHHHhhhhcccccccCCceEEEEC--hHHHH
Confidence 3589999999885 55666654 346799999854 23456666666655321 11 12333321 11110
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCH--HHHHHHH-HhcCCcEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhh
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATF--PLVLRFV-KQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLES 606 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~--~~vL~~I-RsL~PkVVVlvEqeadhns~~F~~RF~EAL~yYsAlFDS 606 (706)
+......=++|++|+...... +..+ ..+++.+ +.|+|.-++++.-++-... .+.+.+.+..+..+|..
T Consensus 151 ----l~~~~~~fDvIi~D~~~p~~~--~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~---~~~~~~~~~~l~~~F~~ 221 (294)
T 3adn_A 151 ----VNQTSQTFDVIISDCTDPIGP--GESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQ---QEEAIDSHRKLSHYFSD 221 (294)
T ss_dssp ------CCCCCEEEEEECC------------CCHHHHHHHHHTEEEEEEEEEEEEECSSC---CHHHHHHHHHHHHHCSE
T ss_pred ----HhhcCCCccEEEECCCCccCc--chhccHHHHHHHHHHhcCCCCEEEEecCCcccc---hHHHHHHHHHHHHHCCC
Confidence 000111235788876532110 0111 5677665 6899999888865432222 24555555556666766
Q ss_pred hh
Q 005237 607 LD 608 (706)
Q Consensus 607 LD 608 (706)
..
T Consensus 222 v~ 223 (294)
T 3adn_A 222 VG 223 (294)
T ss_dssp EE
T ss_pred eE
Confidence 55
No 101
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=63.80 E-value=17 Score=35.95 Aligned_cols=122 Identities=17% Similarity=0.119 Sum_probs=61.2
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcC-CcEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEIN-IPFEL 519 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lg-VpFEF 519 (706)
..|++.+.....-+|+|+|.|.|. +...|+.+ |. ++|||+.. +..++.+.+++.+.....+ ..++|
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s----~~~l~~a~~~~~~~~~~~~~~~~~~ 113 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDAS----DKMLKYALKERWNRRKEPAFDKWVI 113 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESC----HHHHHHHHHHHHHTTTSHHHHTCEE
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECC----HHHHHHHHHhhhhcccccccceeeE
Confidence 445555554556789999999985 34445554 22 99999864 2335555554422111111 13444
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEe-cCcccccCC---CCCHHHHHHHH-HhcCCcEEEEee
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVN-LPIGVFSNY---PATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN-~~~~~l~~~---p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
....+.++.. .+ +....=++|+.+ ..++.+... ......+|+.+ +.|+|.-+++++
T Consensus 114 ~~~d~~~~~~-~~---~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 114 EEANWLTLDK-DV---PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EECCGGGHHH-HS---CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eecChhhCcc-cc---ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 4332222211 00 111112455554 445444220 11255677666 678998777654
No 102
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=63.65 E-value=16 Score=34.18 Aligned_cols=96 Identities=14% Similarity=0.133 Sum_probs=53.0
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISAS 531 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~ 531 (706)
.-.|+|+|.|.|. +...|+.+ ..++|||+.. +..++.+.+++ ++.+ ....++++..
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s----~~~~~~a~~~~-------~~~~--~~~d~~~~~~-- 99 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA-----GFDVDATDGS----PELAAEASRRL-------GRPV--RTMLFHQLDA-- 99 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT-----TCEEEEEESC----HHHHHHHHHHH-------TSCC--EECCGGGCCC--
T ss_pred CCcEEEECCCCCH----HHHHHHHc-----CCeEEEECCC----HHHHHHHHHhc-------CCce--EEeeeccCCC--
Confidence 4579999999886 45566655 2389999854 22344444433 4443 2222222221
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
...=++|+.+..++.+.. .....+|+.+ +.|+|..++++.
T Consensus 100 ------~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 100 ------IDAYDAVWAHACLLHVPR--DELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp ------CSCEEEEEECSCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCcEEEEEecCchhhcCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 011246666655554321 1345666665 678998877764
No 103
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=63.15 E-value=44 Score=33.10 Aligned_cols=104 Identities=12% Similarity=0.097 Sum_probs=57.9
Q ss_pred CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEEEeeccccc
Q 005237 450 CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELEILSLETLI 528 (706)
Q Consensus 450 ~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~~V~lesL~ 528 (706)
...-+|+|+|.|.|.--..|-+. + |..+||+|+.. +..++. +.+-++.+|+. .+|..-.++++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~---~----~~~~v~~vD~s----~~~~~~----a~~~~~~~~l~~v~~~~~d~~~~~ 143 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIV---R----PELELVLVDAT----RKKVAF----VERAIEVLGLKGARALWGRAEVLA 143 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHH---C----TTCEEEEEESC----HHHHHH----HHHHHHHHTCSSEEEEECCHHHHT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHH---C----CCCEEEEEECC----HHHHHH----HHHHHHHhCCCceEEEECcHHHhh
Confidence 34458999999988753333322 1 46799999964 223433 34445566774 666554444432
Q ss_pred ccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 529 SASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 529 ~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
... ..+ ..=++|+.+.. ..++.+++.+ +-|+|.-.+++-.
T Consensus 144 ~~~---~~~-~~fD~I~s~a~--------~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 144 REA---GHR-EAYARAVARAV--------APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp TST---TTT-TCEEEEEEESS--------CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ccc---ccC-CCceEEEECCc--------CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 210 000 11235555431 2366777766 6789998776544
No 104
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=63.01 E-value=50 Score=32.85 Aligned_cols=112 Identities=13% Similarity=0.057 Sum_probs=60.1
Q ss_pred CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccc
Q 005237 450 CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLIS 529 (706)
Q Consensus 450 ~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~ 529 (706)
.+.-+|+|+|.|.|. +...|+.+- ++..++|||+.. +..++.+.+++... ....-.++|....++++..
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s----~~~~~~a~~~~~~~-~~~~~~v~~~~~d~~~~~~ 103 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLS----ATMIKTAEVIKEGS-PDTYKNVSFKISSSDDFKF 103 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESC----HHHHHHHHHHHHHC-C-CCTTEEEEECCTTCCGG
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCC----HHHHHHHHHHHHhc-cCCCCceEEEEcCHHhCCc
Confidence 456789999999884 344444321 135689999864 22344444443322 0113456666654444321
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
.. ...+....=++|+.+..++.+ ....+|+.+ +.|+|..++++
T Consensus 104 ~~-~~~~~~~~fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 104 LG-ADSVDKQKIDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GC-TTTTTSSCEEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEE
T ss_pred cc-cccccCCCeeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEE
Confidence 10 000100122567777666655 245666665 67899887765
No 105
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=62.72 E-value=13 Score=41.08 Aligned_cols=114 Identities=17% Similarity=0.065 Sum_probs=63.6
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FE 518 (706)
.+|++.+...+.-+|+|+|.|.|. +...|+.++ ..+||||+.+ + .++ ...+.++..|+. .+
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~~----~~~V~gvD~s----~-~l~----~A~~~~~~~gl~~~v~ 210 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAS----T-MAQ----HAEVLVKSNNLTDRIV 210 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHTT----CSEEEEEECH----H-HHH----HHHHHHHHTTCTTTEE
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHcC----CCEEEEEEcH----H-HHH----HHHHHHHHcCCCCcEE
Confidence 467777655555699999999886 444666542 4599999853 1 232 333445556763 55
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEeec
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLDR 580 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvEq 580 (706)
|..-.++++. +. ..=++|+.|.++..+.. +..++.+....+.|+|..+++.+.
T Consensus 211 ~~~~d~~~~~-------~~-~~fD~Ivs~~~~~~~~~-e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 211 VIPGKVEEVS-------LP-EQVDIIISEPMGYMLFN-ERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEESCTTTCC-------CS-SCEEEEECCCCHHHHTC-HHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEECchhhCc-------cC-CCeEEEEEeCchHhcCc-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 5543332221 11 11246666654332211 112334444457899999888654
No 106
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=62.40 E-value=29 Score=32.14 Aligned_cols=103 Identities=14% Similarity=0.116 Sum_probs=53.2
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISAS 531 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~ 531 (706)
.-+|+|+|.|.|.-...++ +. .+ .++|||+.. +..++.+.+++. ..+..++|....++++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~s----~~~~~~a~~~~~----~~~~~~~~~~~d~~~~---- 83 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEIS----DLQLKKAENFSR----ENNFKLNISKGDIRKL---- 83 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---HH-TT----CEEEEEECC----HHHHHHHHHHHH----HHTCCCCEEECCTTSC----
T ss_pred CCEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEECC----HHHHHHHHHHHH----hcCCceEEEECchhhC----
Confidence 3579999998876444443 22 22 489999854 223444444433 3344444444322221
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
.+....=++|+.+..++.+. +.....+|+.+ +.|+|.-++++.
T Consensus 84 ---~~~~~~fD~v~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 84 ---PFKDESMSFVYSYGTIFHMR--KNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp ---CSCTTCEEEEEECSCGGGSC--HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCCCceeEEEEcChHHhCC--HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 11111114565555444331 12345666655 678998776653
No 107
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=62.19 E-value=33 Score=35.98 Aligned_cols=135 Identities=11% Similarity=0.072 Sum_probs=71.1
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc-CCcEEEEEeeccccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI-NIPFELEILSLETLISA 530 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l-gVpFEF~~V~lesL~~~ 530 (706)
.-+|+|+|.|.|. +...|+++ +|..+||+|+.. +.-++.+.+++..++..+ +-.++|..-...++-..
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDis----~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~ 189 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARH---ASIEQIDMCEID----KMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKN 189 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTC---TTCCEEEEEESC----HHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHT
T ss_pred CCEEEEECCCccH----HHHHHHHc---CCCCEEEEEECC----HHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHh
Confidence 4589999999886 45666654 346799999853 334666667766654333 22355544222111000
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeecCCCCCCCChHHHHHHHHHHHHHHhh
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLE 605 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEqeadhns~~F~~RF~EAL~yYsAlFD 605 (706)
+.-..=++|++|..........-....+++.+ +.|+|.-++++.-+.-.... ..+.+.+.-...+|.
T Consensus 190 -----~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~~~~~~~l~~~F~ 257 (334)
T 1xj5_A 190 -----AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHM---DIIEDIVSNCREIFK 257 (334)
T ss_dssp -----SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCH---HHHHHHHHHHHHHCS
T ss_pred -----ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccH---HHHHHHHHHHHHhCc
Confidence 11012257777764211000000024666665 68999999988655433222 223444444455565
No 108
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=61.98 E-value=85 Score=33.94 Aligned_cols=95 Identities=22% Similarity=0.327 Sum_probs=57.6
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccCC
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISASW 532 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~~ 532 (706)
-.|+|+|.|.|.-- -.||.+ + -+++||+.. +..++.+.++ |+..|+..+|..-.++++..
T Consensus 292 ~~VLDlgcG~G~~s----l~la~~-~----~~V~gvD~s----~~ai~~A~~n----~~~ngl~v~~~~~d~~~~~~--- 351 (425)
T 2jjq_A 292 EKILDMYSGVGTFG----IYLAKR-G----FNVKGFDSN----EFAIEMARRN----VEINNVDAEFEVASDREVSV--- 351 (425)
T ss_dssp SEEEEETCTTTHHH----HHHHHT-T----CEEEEEESC----HHHHHHHHHH----HHHHTCCEEEEECCTTTCCC---
T ss_pred CEEEEeeccchHHH----HHHHHc-C----CEEEEEECC----HHHHHHHHHH----HHHcCCcEEEEECChHHcCc---
Confidence 36899999988532 345544 2 289999854 2335444444 34456665555432222211
Q ss_pred CCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEee
Q 005237 533 PLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLD 579 (706)
Q Consensus 533 ~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvE 579 (706)
. .-++|++|-+.. +..+.+++.++.|+|+-++.+.
T Consensus 352 ----~--~fD~Vv~dPPr~------g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 352 ----K--GFDTVIVDPPRA------GLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp ----T--TCSEEEECCCTT------CSCHHHHHHHHHHCCSEEEEEE
T ss_pred ----c--CCCEEEEcCCcc------chHHHHHHHHHhcCCCcEEEEE
Confidence 1 235888886531 2235799999999999988874
No 109
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=61.57 E-value=40 Score=30.18 Aligned_cols=103 Identities=14% Similarity=0.002 Sum_probs=56.4
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEI 521 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~ 521 (706)
.|++.+.-.+.-.|+|+|.|.|. +...|+.+. . ++|+|+.. +..++.+.++ .-..+|..
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s----~~~~~~a~~~--------~~~v~~~~ 66 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDIN----VIALKEVKEK--------FDSVITLS 66 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSC----HHHHHHHHHH--------CTTSEEES
T ss_pred HHHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCC----HHHHHHHHHh--------CCCcEEEe
Confidence 34555555666789999999886 344555443 3 99999853 2223333333 11233332
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
. + + .+....=++|+.+..++.+. ....+|+.+ +.|+|.-.+++.
T Consensus 67 ~--d-~-------~~~~~~~D~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 67 D--P-K-------EIPDNSVDFILFANSFHDMD----DKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp S--G-G-------GSCTTCEEEEEEESCSTTCS----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred C--C-C-------CCCCCceEEEEEccchhccc----CHHHHHHHHHHhcCCCCEEEEE
Confidence 1 1 1 11111225666666655442 245666655 678998766653
No 110
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=61.55 E-value=12 Score=38.72 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=65.6
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEE
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFE 518 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFE 518 (706)
..+.|++.+.....-+|+|+|.|.|.-- ..|+.+. |..++|+|+.. +..++.+.+++ +..++..+
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~----~~la~~~---~~~~v~~vD~s----~~~l~~a~~~~----~~~~~~~~ 248 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLS----VAFARHS---PKIRLTLCDVS----APAVEASRATL----AANGVEGE 248 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHH----HHHHHHC---TTCBCEEEESB----HHHHHHHHHHH----HHTTCCCE
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHH----HHHHHHC---CCCEEEEEECC----HHHHHHHHHHH----HHhCCCCE
Confidence 3677888875433447999999988643 3344332 45689999853 22344444444 34566665
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccC-CCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSN-YPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~-~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
|.. .+.++. . ...=++|+.|.+++.... .......+|+.+ +.|+|.-.+++.
T Consensus 249 ~~~--~d~~~~------~-~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 249 VFA--SNVFSE------V-KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp EEE--CSTTTT------C-CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEE--cccccc------c-cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 532 221111 1 112257888887763110 011234566665 678999877654
No 111
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=61.55 E-value=63 Score=31.28 Aligned_cols=56 Identities=20% Similarity=0.167 Sum_probs=33.7
Q ss_pred HHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHH
Q 005237 443 LLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLK 507 (706)
Q Consensus 443 ILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~ 507 (706)
+++.+.+.+...|+|+|.|.|. +.-.|+.+- ..+..+||||+.. +..++.+.+++.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~-~~~~~~v~gvDis----~~~l~~A~~~~~ 98 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLH-RRSLRQVIASDVD----PAPLELAAKNLA 98 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHT-GGGEEEEEEEESC----HHHHHHHHHHHH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHh-ccCCCeEEEEECC----HHHHHHHHHHHH
Confidence 4444545567899999999994 334444331 1135799999854 334555554443
No 112
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=61.45 E-value=23 Score=39.10 Aligned_cols=120 Identities=8% Similarity=-0.002 Sum_probs=64.8
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHH---HHHHhcCC
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLK---HFASEINI 515 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~---~fA~~lgV 515 (706)
.-..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+.. +..++.+.+++. +.++..|+
T Consensus 161 ~i~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS----~~~lelAr~n~e~frkr~~~~Gl 229 (438)
T 3uwp_A 161 LVAQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKA----DIPAKYAETMDREFRKWMKWYGK 229 (438)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECC----HHHHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCC----HHHHHHHHHHHHHHHHHHHHhCC
Confidence 34556676664555679999998885 3333443332 2389999864 223444444443 34566676
Q ss_pred ---cEEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEe
Q 005237 516 ---PFELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSL 578 (706)
Q Consensus 516 ---pFEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlv 578 (706)
.++|..-.+.++.-. ..+..-++|++|..+. .+.....+.+..|.|+|--.+++
T Consensus 230 ~~~rVefi~GD~~~lp~~-----d~~~~aDVVf~Nn~~F----~pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 230 KHAEYTLERGDFLSEEWR-----ERIANTSVIFVNNFAF----GPEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp CCCEEEEEECCTTSHHHH-----HHHHTCSEEEECCTTC----CHHHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCCeEEEECcccCCccc-----cccCCccEEEEccccc----CchHHHHHHHHHHcCCCCcEEEE
Confidence 344433222111100 0011235788886542 12334455566789999887765
No 113
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=61.40 E-value=23 Score=36.67 Aligned_cols=106 Identities=14% Similarity=0.123 Sum_probs=57.1
Q ss_pred HHHHhh--ccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEE
Q 005237 442 ALLEAF--EGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFEL 519 (706)
Q Consensus 442 AILEA~--eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF 519 (706)
.|++.+ .=.+.-+|||+|-|.|. +...|+.+. |.+++|+++.+. .+ +.|+.+. .++|
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-----~~--------~~a~~~~-~v~~ 240 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQPQ-----VV--------GNLTGNE-NLNF 240 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEECHH-----HH--------SSCCCCS-SEEE
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEeccHH-----HH--------hhcccCC-CcEE
Confidence 566666 11233589999999985 445555443 467999998531 11 1122211 1444
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCC---cE-EEEeec
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQP---KI-VVSLDR 580 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~P---kV-VVlvEq 580 (706)
..-.+ .++ +. .-++++.+..+|.+.. .....+|+.+ +.|+| .- ++++|.
T Consensus 241 ~~~d~--~~~------~~--~~D~v~~~~vlh~~~d--~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 241 VGGDM--FKS------IP--SADAVLLKWVLHDWND--EQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp EECCT--TTC------CC--CCSEEEEESCGGGSCH--HHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred EeCcc--CCC------CC--CceEEEEcccccCCCH--HHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 43221 111 11 2467888877765432 1233677776 56888 44 444554
No 114
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=61.25 E-value=44 Score=34.01 Aligned_cols=134 Identities=13% Similarity=0.049 Sum_probs=71.8
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcC-CcEEEEEeecccccccC
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEIN-IPFELEILSLETLISAS 531 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lg-VpFEF~~V~lesL~~~~ 531 (706)
-+|+|+|.|.|. +..+|+++. +.-+||+|+.. +.-++.+.+++.+++..++ -.+++..-...+....
T Consensus 92 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid----~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~- 159 (296)
T 1inl_A 92 KKVLIIGGGDGG----TLREVLKHD---SVEKAILCEVD----GLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK- 159 (296)
T ss_dssp CEEEEEECTTCH----HHHHHTTST---TCSEEEEEESC----HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG-
T ss_pred CEEEEEcCCcCH----HHHHHHhcC---CCCEEEEEECC----HHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh-
Confidence 589999999885 455666553 35799999853 3446666777766554442 2355443221111110
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCC--CHHHHHHHH-HhcCCcEEEEeecCCCCCCCCh-HHHHHHHHHHHHHHhhhh
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPA--TFPLVLRFV-KQLQPKIVVSLDRSCDRPDFPF-AHHMVHALQSYSGLLESL 607 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~--~~~~vL~~I-RsL~PkVVVlvEqeadhns~~F-~~RF~EAL~yYsAlFDSL 607 (706)
....=++|++|.+...+.. +. ....+++.+ +.|+|.-+++++.++ +.+ ...+.+.+......|...
T Consensus 160 -----~~~~fD~Ii~d~~~~~~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~~~~~l~~~F~~v 229 (296)
T 1inl_A 160 -----FKNEFDVIIIDSTDPTAGQ-GGHLFTEEFYQACYDALKEDGVFSAETED----PFYDIGWFKLAYRRISKVFPIT 229 (296)
T ss_dssp -----CSSCEEEEEEEC-----------CCSHHHHHHHHHHEEEEEEEEEECCC----TTTTHHHHHHHHHHHHHHCSEE
T ss_pred -----CCCCceEEEEcCCCcccCc-hhhhhHHHHHHHHHHhcCCCcEEEEEccC----cccCHHHHHHHHHHHHHHCCce
Confidence 0012257887764321110 11 124666665 678999998886432 212 455556566666666654
Q ss_pred h
Q 005237 608 D 608 (706)
Q Consensus 608 D 608 (706)
.
T Consensus 230 ~ 230 (296)
T 1inl_A 230 R 230 (296)
T ss_dssp E
T ss_pred E
Confidence 4
No 115
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=60.59 E-value=9.3 Score=38.25 Aligned_cols=112 Identities=15% Similarity=0.116 Sum_probs=59.0
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcC----Cc
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEIN----IP 516 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lg----Vp 516 (706)
..+++.+..... .|+|+|.|.|. +...|+.+ + .++|||+.. +..++.+.+++ ...+ ..
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s----~~~~~~a~~~~----~~~~~~~~~~ 134 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL-G----WEVTALELS----TSVLAAFRKRL----AEAPADVRDR 134 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT-T----CCEEEEESC----HHHHHHHHHHH----HTSCHHHHTT
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc-C----CeEEEEECC----HHHHHHHHHHH----hhcccccccc
Confidence 445555544333 89999999987 44555655 2 479999864 22344444443 3333 34
Q ss_pred EEEEEeecccccccCCCCCCCCCCCceEEEec-CcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 517 FELEILSLETLISASWPLPLQGLENDVTAVNL-PIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 517 FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~-~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
++|....++++. +. ..=++|++.+ .++.+ . +..+..+|+.+ +.|+|.-.++++-
T Consensus 135 v~~~~~d~~~~~-------~~-~~fD~v~~~~~~~~~~-~-~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 135 CTLVQGDMSAFA-------LD-KRFGTVVISSGSINEL-D-EADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp EEEEECBTTBCC-------CS-CCEEEEEECHHHHTTS-C-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEeCchhcCC-------cC-CCcCEEEECCcccccC-C-HHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 666554333221 10 1113344332 22221 1 11246677766 6789988777643
No 116
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=59.60 E-value=52 Score=33.86 Aligned_cols=114 Identities=13% Similarity=0.032 Sum_probs=61.2
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FE 518 (706)
.+|++.+.-.+.-+|+|+|.|.|. |...++.+. .-+++||+.. . .+..+. +.++..|+. .+
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s-~----~~~~a~----~~~~~~~~~~~i~ 90 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMS-S----IIEMAK----ELVELNGFSDKIT 90 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSH----HHHHHHHTC----CSEEEEEESS-T----HHHHHH----HHHHHTTCTTTEE
T ss_pred HHHHhhHhhcCCCEEEEecCccHH----HHHHHHHCC----CCEEEEEChH-H----HHHHHH----HHHHHcCCCCCEE
Confidence 344444433334589999999985 334555542 2489999864 1 233333 334445553 55
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
|..-.++++. +....=++|+.+.+...+.. ...++.+|+.+ +-|+|..+++.+
T Consensus 91 ~~~~d~~~~~-------~~~~~~D~Ivs~~~~~~l~~-~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 91 LLRGKLEDVH-------LPFPKVDIIISEWMGYFLLY-ESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp EEESCTTTSC-------CSSSCEEEEEECCCBTTBST-TCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EEECchhhcc-------CCCCcccEEEEeCchhhccc-HHHHHHHHHHHHhhcCCCeEEEEe
Confidence 5432222221 11111246666654333322 24567788776 789999887743
No 117
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=59.51 E-value=43 Score=32.03 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=54.4
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc-CCcEEEEEeecccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI-NIPFELEILSLETLIS 529 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l-gVpFEF~~V~lesL~~ 529 (706)
+.-.|+|+|.|.|. +...|+.+. ..++|+|+.. +..++.+.+++ +.. +...+|....++++.
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s----~~~~~~a~~~~----~~~~~~~~~~~~~d~~~~~- 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDIT----EDFLVQAKTYL----GEEGKRVRNYFCCGLQDFT- 141 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESC----HHHHHHHHHHT----GGGGGGEEEEEECCGGGCC-
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCC----HHHHHHHHHHh----hhcCCceEEEEEcChhhcC-
Confidence 35689999999885 344555443 2489999854 22344444333 222 223455443322221
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
+....=++|+.+..++.+.. ..+..+|+.+ +.|+|.-++++
T Consensus 142 ------~~~~~fD~v~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 142 ------PEPDSYDVIWIQWVIGHLTD--QHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp ------CCSSCEEEEEEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCCCCEEEEEEcchhhhCCH--HHHHHHHHHHHHhcCCCeEEEE
Confidence 11111256666665554322 1234566665 67899876665
No 118
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=58.34 E-value=69 Score=32.57 Aligned_cols=110 Identities=11% Similarity=-0.026 Sum_probs=59.3
Q ss_pred HHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EE
Q 005237 440 NQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FE 518 (706)
Q Consensus 440 NQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FE 518 (706)
-..|++.+.-...-+|+|+|.|.|. +...|+.+ ++...++|+|+.. +..++.+.++ ++..|++ .+
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s----~~~~~~a~~~----~~~~g~~~v~ 129 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYS----RKICEIAKRN----VERLGIENVI 129 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESC----HHHHHHHHHH----HHHTTCCSEE
T ss_pred HHHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECC----HHHHHHHHHH----HHHcCCCCeE
Confidence 4456666655555689999998875 33444433 2224589999854 2234434333 3445654 55
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEee
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLD 579 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvE 579 (706)
|..-...+... ....=++|+++.+++.+. + ...+.|+|.-++++.
T Consensus 130 ~~~~d~~~~~~-------~~~~fD~Iv~~~~~~~~~------~---~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 130 FVCGDGYYGVP-------EFSPYDVIFVTVGVDEVP------E---TWFTQLKEGGRVIVP 174 (317)
T ss_dssp EEESCGGGCCG-------GGCCEEEEEECSBBSCCC------H---HHHHHEEEEEEEEEE
T ss_pred EEECChhhccc-------cCCCeEEEEEcCCHHHHH------H---HHHHhcCCCcEEEEE
Confidence 54432222110 011225777776654321 2 234678898777664
No 119
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=58.09 E-value=56 Score=29.44 Aligned_cols=108 Identities=19% Similarity=0.188 Sum_probs=57.5
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeeccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLI 528 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~ 528 (706)
+.-+|+|+|.|.|.-- ..++.+. .-++|+|+.. +..++.+.+++ +..++. .+|..-.+.++.
T Consensus 44 ~~~~vLD~GcG~G~~~----~~~~~~~----~~~v~~vD~~----~~~~~~a~~~~----~~~~~~~~~~~~~~d~~~~~ 107 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLA----IEAVSRG----MDKSICIEKN----FAALKVIKENI----AITKEPEKFEVRKMDANRAL 107 (187)
T ss_dssp SSCEEEETTCTTCHHH----HHHHHTT----CSEEEEEESC----HHHHHHHHHHH----HHHTCGGGEEEEESCHHHHH
T ss_pred CCCCEEEeCCccCHHH----HHHHHcC----CCEEEEEECC----HHHHHHHHHHH----HHhCCCcceEEEECcHHHHH
Confidence 3458999999988632 2244332 3589999853 23344444443 334553 566543332211
Q ss_pred ccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH---HhcCCcEEEEeecCC
Q 005237 529 SASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV---KQLQPKIVVSLDRSC 582 (706)
Q Consensus 529 ~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I---RsL~PkVVVlvEqea 582 (706)
.. +......=++|+.|.+++. ...+.+++.+ +-|+|.-+++++-..
T Consensus 108 ~~---~~~~~~~fD~i~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 108 EQ---FYEEKLQFDLVLLDPPYAK-----QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp HH---HHHTTCCEEEEEECCCGGG-----CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred HH---HHhcCCCCCEEEECCCCCc-----hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 10 0000112257777776441 2345566665 568999888876543
No 120
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=57.97 E-value=87 Score=33.62 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=62.7
Q ss_pred HHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEEE
Q 005237 443 LLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELEI 521 (706)
Q Consensus 443 ILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~~ 521 (706)
+++.+.-...-.|+|+|.|.|.-- ..||.+ .-+++||+.. +..++.+.++ |+..|++ .+|..
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~----~~la~~-----~~~V~gvD~s----~~al~~A~~n----~~~~~~~~v~f~~ 340 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFT----LPLATQ-----AASVVGVEGV----PALVEKGQQN----ARLNGLQNVTFYH 340 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTH----HHHHTT-----SSEEEEEESC----HHHHHHHHHH----HHHTTCCSEEEEE
T ss_pred HHHhhcCCCCCEEEECCCCCCHHH----HHHHhh-----CCEEEEEeCC----HHHHHHHHHH----HHHcCCCceEEEE
Confidence 334443333347999999988643 345544 2489999854 2335544444 4556664 66654
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEee
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLD 579 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvE 579 (706)
-.+++.... +.+....=++|++|-+.. ....+++.|..++|+.+|.+.
T Consensus 341 ~d~~~~l~~---~~~~~~~fD~Vv~dPPr~-------g~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 341 ENLEEDVTK---QPWAKNGFDKVLLDPARA-------GAAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp CCTTSCCSS---SGGGTTCCSEEEECCCTT-------CCHHHHHHHHHHCCSEEEEEE
T ss_pred CCHHHHhhh---hhhhcCCCCEEEECCCCc-------cHHHHHHHHHhcCCCeEEEEE
Confidence 333221110 011111236888886532 134788999999999988774
No 121
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=57.63 E-value=59 Score=34.60 Aligned_cols=106 Identities=14% Similarity=0.140 Sum_probs=60.5
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeeccccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISA 530 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~ 530 (706)
+.-+|+|+|.|.|.- ...|+.+ + .+||+|+.. +..++.+.++ ++..++..+|..-.+.++..
T Consensus 233 ~~~~VLDlGcG~G~~----~~~la~~--g---~~V~gvDis----~~al~~A~~n----~~~~~~~v~~~~~D~~~~~~- 294 (381)
T 3dmg_A 233 RGRQVLDLGAGYGAL----TLPLARM--G---AEVVGVEDD----LASVLSLQKG----LEANALKAQALHSDVDEALT- 294 (381)
T ss_dssp TTCEEEEETCTTSTT----HHHHHHT--T---CEEEEEESB----HHHHHHHHHH----HHHTTCCCEEEECSTTTTSC-
T ss_pred CCCEEEEEeeeCCHH----HHHHHHc--C---CEEEEEECC----HHHHHHHHHH----HHHcCCCeEEEEcchhhccc-
Confidence 445899999999863 3444544 2 399999853 3334444444 44566776665432222111
Q ss_pred CCCCCCCCCCCceEEEecCcccccCC-CCCHHHHHHH-HHhcCCcEEEEeec
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNY-PATFPLVLRF-VKQLQPKIVVSLDR 580 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~-p~~~~~vL~~-IRsL~PkVVVlvEq 580 (706)
....=++|+.|.+++..... ......+++. .+.|+|.-.+++.-
T Consensus 295 ------~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 295 ------EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp ------TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 11123588889887642211 1223455554 46899998877653
No 122
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=56.07 E-value=51 Score=31.57 Aligned_cols=106 Identities=10% Similarity=0.061 Sum_probs=54.0
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeeccccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISA 530 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~ 530 (706)
+.-+|+|+|.|.|. +...|+.+. + -++|||+.. +.-++ ...+.++..+...+|..-.++++..
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~~---~-~~v~gvD~s----~~~l~----~a~~~~~~~~~~v~~~~~d~~~~~~- 122 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECN----DGVFQ----RLRDWAPRQTHKVIPLKGLWEDVAP- 122 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTSC---E-EEEEEEECC----HHHHH----HHHHHGGGCSSEEEEEESCHHHHGG-
T ss_pred CCCeEEEEeccCCH----HHHHHHhcC---C-CeEEEEcCC----HHHHH----HHHHHHHhcCCCeEEEecCHHHhhc-
Confidence 45689999999884 334445432 1 289999854 22233 3333455556556655443333311
Q ss_pred CCCCCCCCCCCceEEE-ecCcccccCC-CCCHHHHHHHH-HhcCCcEEEEe
Q 005237 531 SWPLPLQGLENDVTAV-NLPIGVFSNY-PATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAV-N~~~~~l~~~-p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
.+.-..=++|+. ++.+ ..... ...++.+|+.+ |-|+|..++++
T Consensus 123 ----~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 123 ----TLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp ----GSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred ----ccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 111111245655 3332 11111 11233555554 78899988774
No 123
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=55.58 E-value=79 Score=29.42 Aligned_cols=107 Identities=7% Similarity=0.019 Sum_probs=56.6
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELE 520 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~ 520 (706)
.+++.+.-...-+|+|+|.|.|.--..|.+.. .|..++|+|+.. +..++.+.+++. ..|++ .+|.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~----~~~~~~a~~~~~----~~~~~~v~~~ 133 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIERI----PELAEKAERTLR----KLGYDNVIVI 133 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESC----HHHHHHHHHHHH----HHTCTTEEEE
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeCC----HHHHHHHHHHHH----HcCCCCeEEE
Confidence 45555554555689999999886555554443 234589999853 223444444443 33443 4544
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEe
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSL 578 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlv 578 (706)
..... .. + . ....=++|+++..++.+. + ...+.|+|.-.+++
T Consensus 134 ~~d~~--~~--~--~-~~~~fD~v~~~~~~~~~~------~---~~~~~L~pgG~lv~ 175 (215)
T 2yxe_A 134 VGDGT--LG--Y--E-PLAPYDRIYTTAAGPKIP------E---PLIRQLKDGGKLLM 175 (215)
T ss_dssp ESCGG--GC--C--G-GGCCEEEEEESSBBSSCC------H---HHHHTEEEEEEEEE
T ss_pred ECCcc--cC--C--C-CCCCeeEEEECCchHHHH------H---HHHHHcCCCcEEEE
Confidence 32211 11 0 0 011225777776554321 2 44577888765554
No 124
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=55.53 E-value=65 Score=30.41 Aligned_cols=97 Identities=12% Similarity=0.030 Sum_probs=52.6
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc--CCcEEEEEeeccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI--NIPFELEILSLETLI 528 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l--gVpFEF~~V~lesL~ 528 (706)
+.-+|+|+|.|.|. +...|+.+ + .++|||+.. +..++ .|+.. ...++|....++++.
T Consensus 53 ~~~~vLDiG~G~G~----~~~~l~~~-~----~~v~~vD~s----~~~~~--------~a~~~~~~~~~~~~~~d~~~~~ 111 (242)
T 3l8d_A 53 KEAEVLDVGCGDGY----GTYKLSRT-G----YKAVGVDIS----EVMIQ--------KGKERGEGPDLSFIKGDLSSLP 111 (242)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESC----HHHHH--------HHHTTTCBTTEEEEECBTTBCS
T ss_pred CCCeEEEEcCCCCH----HHHHHHHc-C----CeEEEEECC----HHHHH--------HHHhhcccCCceEEEcchhcCC
Confidence 34589999999885 45566655 2 389999854 22232 23332 234555543332221
Q ss_pred ccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 529 SASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 529 ~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
+....=++|+.+..++.+ + ....+|+.+ +.|+|..++++.
T Consensus 112 -------~~~~~fD~v~~~~~l~~~---~-~~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 112 -------FENEQFEAIMAINSLEWT---E-EPLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp -------SCTTCEEEEEEESCTTSS---S-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CCCCCccEEEEcChHhhc---c-CHHHHHHHHHHHhCCCeEEEEE
Confidence 111122466666555543 2 244556554 788998766654
No 125
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=54.93 E-value=50 Score=30.06 Aligned_cols=104 Identities=22% Similarity=0.158 Sum_probs=52.0
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEEEEEeecccccccC
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFELEILSLETLISAS 531 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFEF~~V~lesL~~~~ 531 (706)
-+|+|+|.|.|.- ...|+.+ ..+||||+.. +..++.+.+++. ..|+ ..+|..-..+.+..
T Consensus 24 ~~vLDiGcG~G~~----~~~la~~-----~~~v~~vD~s----~~~l~~a~~~~~----~~~~~~v~~~~~~~~~l~~-- 84 (185)
T 3mti_A 24 SIVVDATMGNGND----TAFLAGL-----SKKVYAFDVQ----EQALGKTSQRLS----DLGIENTELILDGHENLDH-- 84 (185)
T ss_dssp CEEEESCCTTSHH----HHHHHTT-----SSEEEEEESC----HHHHHHHHHHHH----HHTCCCEEEEESCGGGGGG--
T ss_pred CEEEEEcCCCCHH----HHHHHHh-----CCEEEEEECC----HHHHHHHHHHHH----HcCCCcEEEEeCcHHHHHh--
Confidence 3699999998863 3446655 3589999854 333554544443 3454 34554422222221
Q ss_pred CCCCCCCCCCceEEEecCccc-----ccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 532 WPLPLQGLENDVTAVNLPIGV-----FSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~-----l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
+.-..=++|+.|+.... +...+.....+|+.+ +.|+|.-.+++.
T Consensus 85 ----~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 85 ----YVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp ----TCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----hccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 11111246776743211 111111223444444 789998876653
No 126
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=54.62 E-value=56 Score=32.31 Aligned_cols=114 Identities=18% Similarity=0.165 Sum_probs=59.6
Q ss_pred HHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEEE
Q 005237 443 LLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELEI 521 (706)
Q Consensus 443 ILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~~ 521 (706)
+++.+. .+..+|+|+|.|.|.-=. .|+.+. |..++|+|+.. +..++.+.+++ +..|++ .+|..
T Consensus 102 ~l~~~~-~~~~~vLDlG~GsG~~~~----~la~~~---~~~~v~~vD~s----~~~l~~a~~n~----~~~~~~~v~~~~ 165 (276)
T 2b3t_A 102 ALARLP-EQPCRILDLGTGTGAIAL----ALASER---PDCEIIAVDRM----PDAVSLAQRNA----QHLAIKNIHILQ 165 (276)
T ss_dssp HHHHSC-SSCCEEEEETCTTSHHHH----HHHHHC---TTSEEEEECSS----HHHHHHHHHHH----HHHTCCSEEEEC
T ss_pred HHHhcc-cCCCEEEEecCCccHHHH----HHHHhC---CCCEEEEEECC----HHHHHHHHHHH----HHcCCCceEEEE
Confidence 334443 345689999999886333 344222 34699999853 33455444443 444664 54443
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCccccc----------CCC-----------CCHHHHHHHH-HhcCCcEEEEee
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFS----------NYP-----------ATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~----------~~p-----------~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
-.+ .+. +....=++|+.|.++.... ..| .....+++.+ +.|+|.-+++++
T Consensus 166 ~d~--~~~------~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 166 SDW--FSA------LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CST--TGG------GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cch--hhh------cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 221 111 1111225788886643210 011 0124455544 578999888887
Q ss_pred c
Q 005237 580 R 580 (706)
Q Consensus 580 q 580 (706)
.
T Consensus 238 ~ 238 (276)
T 2b3t_A 238 H 238 (276)
T ss_dssp C
T ss_pred E
Confidence 3
No 127
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=54.59 E-value=87 Score=30.48 Aligned_cols=106 Identities=12% Similarity=0.110 Sum_probs=55.0
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeeccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLI 528 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~ 528 (706)
+.-+|+|+|.|.|.--.. |+.+. ..++|||+.. +..++.+.++ ++..++. ++|....+.++
T Consensus 64 ~~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s----~~~~~~a~~~----~~~~~~~~~v~~~~~d~~~~- 126 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIA----EVSINDARVR----ARNMKRRFKVFFRAQDSYGR- 126 (298)
T ss_dssp TTCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESC----HHHHHHHHHH----HHTSCCSSEEEEEESCTTTS-
T ss_pred CCCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECC----HHHHHHHHHH----HHhcCCCccEEEEECCcccc-
Confidence 345899999999863322 44332 3489999854 2234433333 3445553 44433222211
Q ss_pred ccCCCCCC-CCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 529 SASWPLPL-QGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 529 ~~~~~l~L-r~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
.+ ....=++|+.+..++.+.........+|+.+ +.|+|.-.+++.
T Consensus 127 ------~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 127 ------HMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp ------CCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ------ccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 11 1111256666665553211112345666665 678998877654
No 128
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=54.33 E-value=1.4e+02 Score=30.74 Aligned_cols=145 Identities=12% Similarity=0.066 Sum_probs=75.1
Q ss_pred HHHHHHHhhCCccchhHHHHHHHHHHhh----ccCce-eEEEeccccccc--chHHHHHHHhcCCCCCCcEEEEEecCCC
Q 005237 420 SAYKSFSEISPILQFANFTCNQALLEAF----EGCNR-IHIIDFDIGYGG--QWASLMQELVFRSEGPPSLKITAFTSSS 492 (706)
Q Consensus 420 ~Ayk~f~e~sP~lkFAhftANQAILEA~----eG~~r-VHIIDFgIg~G~--QWpsLIQaLA~R~gGPPsLRITgI~~ps 492 (706)
.+-..+.++.|-+. ...-+|.+-|.-+ .+... =+|+|+|.|-+. ---.+.|.+ .|..|||+|+..
T Consensus 43 ~~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~------~P~arVv~VD~s- 114 (277)
T 3giw_A 43 EAGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSV------APESRVVYVDND- 114 (277)
T ss_dssp HHHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHH------CTTCEEEEEECC-
T ss_pred HHHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHH------CCCCEEEEEeCC-
Confidence 45566777888874 3344777766643 23322 379999998644 222333333 245799999853
Q ss_pred CCChhhHHHHHHHHHHHHHhcCCcEEEEEeeccccccc-CCC---CCCCCCCCceEEEecCcccccCCCCCHHHHHHH-H
Q 005237 493 THDEFELGFTQENLKHFASEINIPFELEILSLETLISA-SWP---LPLQGLENDVTAVNLPIGVFSNYPATFPLVLRF-V 567 (706)
Q Consensus 493 s~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~-~~~---l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~-I 567 (706)
+.-|..++.+|.+. -.-..+|....+.++... ..+ -.+..+.--+|+.|..+|.+... .....+|+. .
T Consensus 115 ---p~mLa~Ar~~l~~~---~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~-~~p~~~l~~l~ 187 (277)
T 3giw_A 115 ---PIVLTLSQGLLAST---PEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDE-DDAVGIVRRLL 187 (277)
T ss_dssp ---HHHHHTTHHHHCCC---SSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGG-GCHHHHHHHHH
T ss_pred ---hHHHHHHHHHhccC---CCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCch-hhHHHHHHHHH
Confidence 33344444555321 112355555444332110 000 01221122267778888766431 112456654 5
Q ss_pred HhcCCcEEEEee
Q 005237 568 KQLQPKIVVSLD 579 (706)
Q Consensus 568 RsL~PkVVVlvE 579 (706)
+.|+|--++++.
T Consensus 188 ~~L~PGG~Lvls 199 (277)
T 3giw_A 188 EPLPSGSYLAMS 199 (277)
T ss_dssp TTSCTTCEEEEE
T ss_pred HhCCCCcEEEEE
Confidence 678998766543
No 129
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=54.14 E-value=39 Score=32.26 Aligned_cols=31 Identities=13% Similarity=0.167 Sum_probs=23.2
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSS 491 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~p 491 (706)
.-+|+|+|.|.|. +...|+.+ + .++|+|+..
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s 79 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ-A----ARWAAYDFS 79 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG-S----SEEEEEESC
T ss_pred CCeEEEeCCCCCH----HHHHHHHc-C----CEEEEEECC
Confidence 3579999999986 55666665 2 389999854
No 130
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=54.05 E-value=93 Score=31.63 Aligned_cols=109 Identities=21% Similarity=0.361 Sum_probs=57.4
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELE 520 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~ 520 (706)
..|++++.-... +|+|+|-|.|. |-..|+.+. -++|+|+.. +.-+....+++. +-.+++.
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid----~~~~~~l~~~~~------~~~v~vi 96 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKD----LRLRPVLEETLS------GLPVRLV 96 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESC----GGGHHHHHHHTT------TSSEEEE
T ss_pred HHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECC----HHHHHHHHHhcC------CCCEEEE
Confidence 446666665556 99999999885 566777663 379999853 223443444432 1234443
Q ss_pred EeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcC-CcEEEEeecC
Q 005237 521 ILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQ-PKIVVSLDRS 581 (706)
Q Consensus 521 ~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~-PkVVVlvEqe 581 (706)
. .|-++- .++ .......|+-|++.+.. .+.+.+.+.... .+.++++..|
T Consensus 97 ~--~D~l~~-~~~---~~~~~~~iv~NlPy~is------s~il~~ll~~~~~~~~~lm~QkE 146 (271)
T 3fut_A 97 F--QDALLY-PWE---EVPQGSLLVANLPYHIA------TPLVTRLLKTGRFARLVFLVQKE 146 (271)
T ss_dssp E--SCGGGS-CGG---GSCTTEEEEEEECSSCC------HHHHHHHHHHCCEEEEEEEEEHH
T ss_pred E--CChhhC-Chh---hccCccEEEecCccccc------HHHHHHHhcCCCCCEEEEEeeee
Confidence 3 221211 000 11134578889886521 244555555422 2444555444
No 131
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=53.79 E-value=1.1e+02 Score=28.44 Aligned_cols=106 Identities=11% Similarity=0.005 Sum_probs=56.9
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FEL 519 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF 519 (706)
..+++.+.-.+.-+|+|+|.|.|.-- ..|+.+ + -++|+|+.. +..++.+.+++ +..|++ .+|
T Consensus 67 ~~~~~~l~~~~~~~vLdiG~G~G~~~----~~la~~-~----~~v~~vD~~----~~~~~~a~~~~----~~~~~~~v~~ 129 (210)
T 3lbf_A 67 ARMTELLELTPQSRVLEIGTGSGYQT----AILAHL-V----QHVCSVERI----KGLQWQARRRL----KNLDLHNVST 129 (210)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHH----HHHHHH-S----SEEEEEESC----HHHHHHHHHHH----HHTTCCSEEE
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHH----HHHHHh-C----CEEEEEecC----HHHHHHHHHHH----HHcCCCceEE
Confidence 34456665556678999999988643 233433 2 489999853 22344444443 445654 444
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEee
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLD 579 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvE 579 (706)
..-...+.. .....=++|+++..++.+. . ...+.|+|.-.+++.
T Consensus 130 ~~~d~~~~~-------~~~~~~D~i~~~~~~~~~~---~------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 130 RHGDGWQGW-------QARAPFDAIIVTAAPPEIP---T------ALMTQLDEGGILVLP 173 (210)
T ss_dssp EESCGGGCC-------GGGCCEEEEEESSBCSSCC---T------HHHHTEEEEEEEEEE
T ss_pred EECCcccCC-------ccCCCccEEEEccchhhhh---H------HHHHhcccCcEEEEE
Confidence 442221110 0111225777776554332 1 345778898766554
No 132
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=53.35 E-value=38 Score=31.43 Aligned_cols=95 Identities=15% Similarity=0.114 Sum_probs=47.8
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeeccccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISA 530 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~ 530 (706)
+.-+|+|+|.|.|. +...|+.+ + .-++|||+.. +..++.+.+++. ..+|..-.+.++.
T Consensus 51 ~~~~vlD~gcG~G~----~~~~l~~~-~---~~~v~~vD~~----~~~~~~a~~~~~--------~~~~~~~d~~~~~-- 108 (200)
T 1ne2_A 51 GGRSVIDAGTGNGI----LACGSYLL-G---AESVTAFDID----PDAIETAKRNCG--------GVNFMVADVSEIS-- 108 (200)
T ss_dssp BTSEEEEETCTTCH----HHHHHHHT-T---BSEEEEEESC----HHHHHHHHHHCT--------TSEEEECCGGGCC--
T ss_pred CCCEEEEEeCCccH----HHHHHHHc-C---CCEEEEEECC----HHHHHHHHHhcC--------CCEEEECcHHHCC--
Confidence 34579999999887 34455655 1 3489999853 223444444332 3344432222221
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEe
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSL 578 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlv 578 (706)
..=++|+.|.+++.... .....+|+.+.++. .++.++
T Consensus 109 --------~~~D~v~~~~p~~~~~~--~~~~~~l~~~~~~~-g~~~~~ 145 (200)
T 1ne2_A 109 --------GKYDTWIMNPPFGSVVK--HSDRAFIDKAFETS-MWIYSI 145 (200)
T ss_dssp --------CCEEEEEECCCC---------CHHHHHHHHHHE-EEEEEE
T ss_pred --------CCeeEEEECCCchhccC--chhHHHHHHHHHhc-CcEEEE
Confidence 12368888988765432 12235666654443 444443
No 133
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=52.74 E-value=59 Score=31.48 Aligned_cols=110 Identities=10% Similarity=0.022 Sum_probs=58.3
Q ss_pred HhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc---EEEEE
Q 005237 445 EAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP---FELEI 521 (706)
Q Consensus 445 EA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp---FEF~~ 521 (706)
......+.-+|+|+|.+.|.-=..|.+++ +|.-+||+|+.. +..++ ...+.++..|+. ++|..
T Consensus 50 ~~~~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~----~~~~~----~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 50 ATTNGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPE----SEHQR----QAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp HHSCCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSC----HHHHH----HHHHHHHHTTCCGGGEEEEC
T ss_pred HhhCCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECC----HHHHH----HHHHHHHHcCCCcCcEEEEE
Confidence 33334445689999988876444444433 234599999853 22333 334445666775 55544
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHH-HHhcCCcEEEEeec
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRF-VKQLQPKIVVSLDR 580 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~-IRsL~PkVVVlvEq 580 (706)
-...++... +.-..=+.|.++... .....+|+. .+-|+|.-+++++.
T Consensus 116 gda~~~l~~-----~~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 116 SRPLDVMSR-----LANDSYQLVFGQVSP-------MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp SCHHHHGGG-----SCTTCEEEEEECCCT-------TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cCHHHHHHH-----hcCCCcCeEEEcCcH-------HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 222111110 110112455555321 234455554 47899999999854
No 134
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=52.19 E-value=99 Score=31.54 Aligned_cols=105 Identities=10% Similarity=0.118 Sum_probs=55.3
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-------cEEEEEeec
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-------PFELEILSL 524 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-------pFEF~~V~l 524 (706)
.-+|+|+|.|.|.- +..++.+.+ -++||||.+ +..|+.+.++..+ .++ .++|....+
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----~~v~GiD~S----~~~l~~A~~~~~~----~~~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----ALLVATDPD----ADAIARGNERYNK----LNSGIKTKYYKFDYIQETI 112 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----SEEEEEESC----HHHHHHHHHHHHH----HCC----CCCEEEEEECCT
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----CeEEEEECC----HHHHHHHHHHHHh----ccccccccccccchhhhhc
Confidence 46899999999852 222333322 379999964 2346666665433 233 245654332
Q ss_pred ------ccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 525 ------ETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 525 ------esL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
++|.. .+....=++|...+.+|.+... ..+..+|+.+ |.|+|.-++++
T Consensus 113 ~~d~~~~~l~~-----~~~~~~FD~V~~~~~lhy~~~~-~~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 113 RSDTFVSSVRE-----VFYFGKFNIIDWQFAIHYSFHP-RHYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp TSSSHHHHHHT-----TCCSSCEEEEEEESCGGGTCST-TTHHHHHHHHHHHEEEEEEEEE
T ss_pred ccchhhhhhhc-----cccCCCeeEEEECchHHHhCCH-HHHHHHHHHHHHHcCCCCEEEE
Confidence 11110 0110111355545555433222 2356777776 67999987765
No 135
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=52.17 E-value=1.2e+02 Score=31.82 Aligned_cols=108 Identities=18% Similarity=0.094 Sum_probs=58.7
Q ss_pred cCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEEEEEeeccc
Q 005237 449 GCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFELEILSLET 526 (706)
Q Consensus 449 G~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFEF~~V~les 526 (706)
-...-.|+|.|.|.|. +.-.+|.+.. .-+|+|++.. +..++.+.++ ++..|+ ..+|..-.+.+
T Consensus 215 ~~~~~~vLD~gCGsG~----~~i~~a~~~~---~~~v~g~Dis----~~~l~~A~~n----~~~~gl~~~i~~~~~D~~~ 279 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGT----ILIELALRRY---SGEIIGIEKY----RKHLIGAEMN----ALAAGVLDKIKFIQGDATQ 279 (373)
T ss_dssp TCCSCCEEETTCTTCH----HHHHHHHTTC---CSCEEEEESC----HHHHHHHHHH----HHHTTCGGGCEEEECCGGG
T ss_pred cCCCCEEEEccCcCcH----HHHHHHHhCC---CCeEEEEeCC----HHHHHHHHHH----HHHcCCCCceEEEECChhh
Confidence 3345579999999885 3444554421 2379999853 3345555554 445576 56665543333
Q ss_pred ccccCCCCCCCCCCCceEEEecCcccccCCCCCH----HHHHHHHHh-cCCcEEEEe
Q 005237 527 LISASWPLPLQGLENDVTAVNLPIGVFSNYPATF----PLVLRFVKQ-LQPKIVVSL 578 (706)
Q Consensus 527 L~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~----~~vL~~IRs-L~PkVVVlv 578 (706)
+.. ....-++|+.|.+++.-......+ ..+++.++. |++++++++
T Consensus 280 ~~~-------~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 280 LSQ-------YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp GGG-------TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCc-------ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 321 111236888998875322111122 456777765 666666664
No 136
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=52.01 E-value=45 Score=34.27 Aligned_cols=112 Identities=14% Similarity=0.136 Sum_probs=60.7
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHh-c-CCcEEEEEeecccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASE-I-NIPFELEILSLETLIS 529 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~-l-gVpFEF~~V~lesL~~ 529 (706)
.-+|+|+|.|.|. +...|+++. |..+||+|+.. +.-++.+.+++.+.... + +-.++|..-...++..
T Consensus 78 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid----~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 146 (314)
T 1uir_A 78 PKRVLIVGGGEGA----TLREVLKHP---TVEKAVMVDID----GELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLE 146 (314)
T ss_dssp CCEEEEEECTTSH----HHHHHTTST---TCCEEEEEESC----HHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHH
T ss_pred CCeEEEEcCCcCH----HHHHHHhcC---CCCEEEEEECC----HHHHHHHHHHhHhhccccccCCceEEEEchHHHHHH
Confidence 3589999999885 556666553 45699999853 33455566666554332 2 2235554322211101
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCC-CC--HHHHHHHH-HhcCCcEEEEeec
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYP-AT--FPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p-~~--~~~vL~~I-RsL~PkVVVlvEq 580 (706)
. ....=++|+++...+.....+ .. ...+++.+ +.|+|.-++++..
T Consensus 147 ~------~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 147 R------TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp H------CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred h------cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 0 001225788886543200011 11 25667665 6789998887753
No 137
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=51.89 E-value=30 Score=35.03 Aligned_cols=134 Identities=12% Similarity=0.085 Sum_probs=67.6
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc-CCcEEEEEeeccccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI-NIPFELEILSLETLISA 530 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l-gVpFEF~~V~lesL~~~ 530 (706)
.-+|+|+|.|.|. +..+++++ +|..+||+|+.. +.-++.+.+++...+..+ +-.+++..-...+....
T Consensus 79 ~~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid----~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~ 147 (283)
T 2i7c_A 79 PKNVLVVGGGDGG----IIRELCKY---KSVENIDICEID----ETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN 147 (283)
T ss_dssp CCEEEEEECTTSH----HHHHHTTC---TTCCEEEEEESC----HHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH
T ss_pred CCeEEEEeCCcCH----HHHHHHHc---CCCCEEEEEECC----HHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh
Confidence 3589999998874 55666654 345799999853 333444455443322212 12344443221111110
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCH--HHHHHHH-HhcCCcEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhhh
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATF--PLVLRFV-KQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLESL 607 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~--~~vL~~I-RsL~PkVVVlvEqeadhns~~F~~RF~EAL~yYsAlFDSL 607 (706)
....=++|+++........ ..+ ..+++.+ +.|+|.-++++..++.... ...+...+.....+|...
T Consensus 148 ------~~~~fD~Ii~d~~~~~~~~--~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F~~v 216 (283)
T 2i7c_A 148 ------VTNTYDVIIVDSSDPIGPA--ETLFNQNFYEKIYNALKPNGYCVAQCESLWIH---VGTIKNMIGYAKKLFKKV 216 (283)
T ss_dssp ------CCSCEEEEEEECCCTTTGG--GGGSSHHHHHHHHHHEEEEEEEEEECCCTTTC---HHHHHHHHHHHHTTCSEE
T ss_pred ------CCCCceEEEEcCCCCCCcc--hhhhHHHHHHHHHHhcCCCcEEEEECCCcccC---HHHHHHHHHHHHHHCCce
Confidence 0112257888764321100 112 5677776 6799999888865432211 233444444444445443
No 138
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=50.95 E-value=29 Score=36.00 Aligned_cols=134 Identities=12% Similarity=0.094 Sum_probs=68.6
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc-CCcEEEEEeeccccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI-NIPFELEILSLETLISA 530 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l-gVpFEF~~V~lesL~~~ 530 (706)
.-+|+|+|.|.|. +..+++++. |..+||+|+.. +..++.+.+++..++..+ +-.++|..-...+....
T Consensus 117 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDis----~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~ 185 (321)
T 2pt6_A 117 PKNVLVVGGGDGG----IIRELCKYK---SVENIDICEID----ETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN 185 (321)
T ss_dssp CCEEEEEECTTCH----HHHHHTTCT---TCCEEEEEESC----HHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH
T ss_pred CCEEEEEcCCccH----HHHHHHHcC---CCCEEEEEECC----HHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh
Confidence 3579999999885 455666543 45799999853 334555555544332222 12344443221111000
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCH--HHHHHHH-HhcCCcEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhhh
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATF--PLVLRFV-KQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLESL 607 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~--~~vL~~I-RsL~PkVVVlvEqeadhns~~F~~RF~EAL~yYsAlFDSL 607 (706)
....=++|++|.... ... +..+ ..+++.+ +.|+|.-+++++.++.... .+.+.+.+......|...
T Consensus 186 ------~~~~fDvIi~d~~~p-~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F~~v 254 (321)
T 2pt6_A 186 ------VTNTYDVIIVDSSDP-IGP-AETLFNQNFYEKIYNALKPNGYCVAQCESLWIH---VGTIKNMIGYAKKLFKKV 254 (321)
T ss_dssp ------CCSCEEEEEEECCCS-SSG-GGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTC---HHHHHHHHHHHHTTCSEE
T ss_pred ------cCCCceEEEECCcCC-CCc-chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC---HHHHHHHHHHHHHHCCCe
Confidence 001225788886321 100 0111 4667665 6789999999875432212 334444444444455544
No 139
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=50.83 E-value=40 Score=32.21 Aligned_cols=106 Identities=12% Similarity=0.098 Sum_probs=54.9
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISAS 531 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~ 531 (706)
.-.|+|+|.|.|. +...|+.+- + ++|||+.. +..++.+.+++ . .-..+|....+.++....
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~~--~---~v~gvD~s----~~~~~~a~~~~----~--~~~~~~~~~d~~~~~~~~ 117 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQFF--P---RVIGLDVS----KSALEIAAKEN----T--AANISYRLLDGLVPEQAA 117 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHHS--S---CEEEEESC----HHHHHHHHHHS----C--CTTEEEEECCTTCHHHHH
T ss_pred CCeEEEEcCCCCH----HHHHHHHhC--C---CEEEEECC----HHHHHHHHHhC----c--ccCceEEECccccccccc
Confidence 3469999999874 344455432 2 89999854 22344333333 1 124555544333222100
Q ss_pred CCCCCC-CCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEE-EEeecC
Q 005237 532 WPLPLQ-GLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIV-VSLDRS 581 (706)
Q Consensus 532 ~~l~Lr-~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVV-VlvEqe 581 (706)
.+. ....++|+.+..++.+.. .....+|+.+ +.|+|.-. ++++..
T Consensus 118 ---~~~~~~~~d~v~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 118 ---QIHSEIGDANIYMRTGFHHIPV--EKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp ---HHHHHHCSCEEEEESSSTTSCG--GGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred ---ccccccCccEEEEcchhhcCCH--HHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 000 001346777766654421 2355677665 67899875 555553
No 140
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=50.43 E-value=54 Score=32.43 Aligned_cols=128 Identities=16% Similarity=0.080 Sum_probs=62.8
Q ss_pred HHHHhhc-cCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EE
Q 005237 442 ALLEAFE-GCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FE 518 (706)
Q Consensus 442 AILEA~e-G~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FE 518 (706)
.+|-++. -.+.-+|+|+|.|.|.- ...|+.|. |..+||+|+.. +..++.+.+++...+. .|+. ++
T Consensus 26 ~lL~~~~~~~~~~~VLDlG~G~G~~----~l~la~~~---~~~~v~gvDi~----~~~~~~a~~n~~~~~~-~~l~~~v~ 93 (260)
T 2ozv_A 26 MLLASLVADDRACRIADLGAGAGAA----GMAVAARL---EKAEVTLYERS----QEMAEFARRSLELPDN-AAFSARIE 93 (260)
T ss_dssp HHHHHTCCCCSCEEEEECCSSSSHH----HHHHHHHC---TTEEEEEEESS----HHHHHHHHHHTTSGGG-TTTGGGEE
T ss_pred HHHHHHhcccCCCEEEEeCChHhHH----HHHHHHhC---CCCeEEEEECC----HHHHHHHHHHHHhhhh-CCCcceEE
Confidence 3344433 33456899999999863 23344443 35899999853 3334444444322110 4554 55
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCccccc--------------CCCCCHHHHHHHH-HhcCCcEEEEeecC
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFS--------------NYPATFPLVLRFV-KQLQPKIVVSLDRS 581 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~--------------~~p~~~~~vL~~I-RsL~PkVVVlvEqe 581 (706)
|....+.++........+....=++|+.|.++.... .....++.+|+.+ +-|+|.-.+++...
T Consensus 94 ~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 94 VLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 544333222100000001111226888886653210 0112356677665 67899987776543
No 141
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=49.31 E-value=1.7e+02 Score=27.48 Aligned_cols=107 Identities=14% Similarity=-0.064 Sum_probs=54.2
Q ss_pred ceeEEEecccc-cccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccc
Q 005237 451 NRIHIIDFDIG-YGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLIS 529 (706)
Q Consensus 451 ~rVHIIDFgIg-~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~ 529 (706)
+.-.|+|+|.| .|. +...|+.+. ..+||||+.. +..++.+.+ -++..|+.++|..-.++.+..
T Consensus 55 ~~~~vLDlG~G~~G~----~~~~la~~~----~~~v~~vD~s----~~~~~~a~~----~~~~~~~~v~~~~~d~~~~~~ 118 (230)
T 3evz_A 55 GGEVALEIGTGHTAM----MALMAEKFF----NCKVTATEVD----EEFFEYARR----NIERNNSNVRLVKSNGGIIKG 118 (230)
T ss_dssp SSCEEEEECCTTTCH----HHHHHHHHH----CCEEEEEECC----HHHHHHHHH----HHHHTTCCCEEEECSSCSSTT
T ss_pred CCCEEEEcCCCHHHH----HHHHHHHhc----CCEEEEEECC----HHHHHHHHH----HHHHhCCCcEEEeCCchhhhh
Confidence 34579999999 885 223344332 3589999853 223444443 445567655555432212221
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCC----C-----------CCHHHHHHHH-HhcCCcEEEEee
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNY----P-----------ATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~----p-----------~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
+.-..=++|+.|.++...... + .....+|+.+ +-|+|.-.+++.
T Consensus 119 ------~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 119 ------VVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp ------TCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ------cccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 111122577888765422110 0 0024455554 457888766653
No 142
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=48.25 E-value=1.2e+02 Score=30.19 Aligned_cols=94 Identities=15% Similarity=0.099 Sum_probs=49.4
Q ss_pred EEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccCCC
Q 005237 454 HIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISASWP 533 (706)
Q Consensus 454 HIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~~~ 533 (706)
.|+|+|.|.|. +...|+.+- -+||||+.+ +.-+ +.|++. -.++|..-..+++.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~~-----~~v~gvD~s----~~ml--------~~a~~~-~~v~~~~~~~e~~~----- 94 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEFF-----ERVHAVDPG----EAQI--------RQALRH-PRVTYAVAPAEDTG----- 94 (257)
T ss_dssp EEEEESCTTTT----THHHHHTTC-----SEEEEEESC----HHHH--------HTCCCC-TTEEEEECCTTCCC-----
T ss_pred CEEEEcCCCCH----HHHHHHHhC-----CEEEEEeCc----HHhh--------hhhhhc-CCceeehhhhhhhc-----
Confidence 58999999884 334556442 279999864 1112 223322 23445443333321
Q ss_pred CCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEE-eecC
Q 005237 534 LPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVS-LDRS 581 (706)
Q Consensus 534 l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVl-vEqe 581 (706)
+.-..=+.|+++..+|.+ ..+.+|+.+ |-|+|.-+++ +...
T Consensus 95 --~~~~sfD~v~~~~~~h~~-----~~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 95 --LPPASVDVAIAAQAMHWF-----DLDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp --CCSSCEEEEEECSCCTTC-----CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --ccCCcccEEEEeeehhHh-----hHHHHHHHHHHHcCCCCEEEEEECC
Confidence 211111455555555433 245666655 6789998765 4443
No 143
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=47.93 E-value=60 Score=31.41 Aligned_cols=98 Identities=16% Similarity=0.166 Sum_probs=53.6
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccccC
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISAS 531 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~~ 531 (706)
.-.|+|+|.|.|. +...|+.+ + .++|||+.. +..++.+.+++. ..+|....++++
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s----~~~~~~a~~~~~--------~~~~~~~d~~~~---- 105 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--F---GTVEGLELS----ADMLAIARRRNP--------DAVLHHGDMRDF---- 105 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--S---SEEEEEESC----HHHHHHHHHHCT--------TSEEEECCTTTC----
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--C---CeEEEEECC----HHHHHHHHhhCC--------CCEEEECChHHC----
Confidence 4679999999884 45666655 2 289999854 222333333321 334443222221
Q ss_pred CCCCCCCCCCceEEEec-CcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 532 WPLPLQGLENDVTAVNL-PIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~-~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
.+ ...=++|+.+. .++.+.. +..+..+|+.+ +.|+|.-+++++
T Consensus 106 ---~~-~~~fD~v~~~~~~l~~~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 106 ---SL-GRRFSAVTCMFSSIGHLAG-QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ---CC-SCCEEEEEECTTGGGGSCH-HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ---Cc-cCCcCEEEEcCchhhhcCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 11 11224666665 5554421 12345666665 678999988886
No 144
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=47.43 E-value=98 Score=30.81 Aligned_cols=109 Identities=15% Similarity=0.109 Sum_probs=58.8
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc-CCcEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI-NIPFEL 519 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l-gVpFEF 519 (706)
..|++++.-.+.-+|+|+|-|.|. |...|+.+. .-++|+|+.. + ++.+.|++. .-.++|
T Consensus 21 ~~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid----~--------~~~~~~~~~~~~~v~~ 80 (249)
T 3ftd_A 21 KKIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELD----R--------EMVENLKSIGDERLEV 80 (249)
T ss_dssp HHHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCC----H--------HHHHHHTTSCCTTEEE
T ss_pred HHHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECC----H--------HHHHHHHhccCCCeEE
Confidence 445666654555689999998875 677788762 3589999853 2 333444433 122333
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhc--CCcEEEEeecC
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQL--QPKIVVSLDRS 581 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL--~PkVVVlvEqe 581 (706)
..-.+.+++.. .+ .+.-.|+-|.+.+.. .+.+++.+... -++.++++..|
T Consensus 81 i~~D~~~~~~~----~~--~~~~~vv~NlPy~i~------~~il~~ll~~~~~~~~~~~m~Qke 132 (249)
T 3ftd_A 81 INEDASKFPFC----SL--GKELKVVGNLPYNVA------SLIIENTVYNKDCVPLAVFMVQKE 132 (249)
T ss_dssp ECSCTTTCCGG----GS--CSSEEEEEECCTTTH------HHHHHHHHHTGGGCSEEEEEEEHH
T ss_pred EEcchhhCChh----Hc--cCCcEEEEECchhcc------HHHHHHHHhcCCCCceEEEEEeHH
Confidence 32111111110 01 112367778886421 23455555533 46777777665
No 145
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=46.78 E-value=76 Score=30.97 Aligned_cols=103 Identities=11% Similarity=0.069 Sum_probs=56.6
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeecccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLIS 529 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~~ 529 (706)
.-.|+|+|.+.|.--. .|+.+- |+..+||+|+.. +..++. ..+.++..|+. .+|..-...+..+
T Consensus 64 ~~~VLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~s----~~~~~~----a~~~~~~~g~~~~v~~~~~d~~~~l~ 129 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTI----WMAREL--PADGQLLTLEAD----AHHAQV----ARENLQLAGVDQRVTLREGPALQSLE 129 (248)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEECC----HHHHHH----HHHHHHHTTCTTTEEEEESCHHHHHH
T ss_pred CCEEEEecCCchHHHH----HHHHhC--CCCCEEEEEECC----HHHHHH----HHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 3479999999886433 344332 335799999853 223433 33445556765 6665433222111
Q ss_pred cCCCCCCC-CCCCceEEEecCcccccCCCCCHHHHHHH-HHhcCCcEEEEeec
Q 005237 530 ASWPLPLQ-GLENDVTAVNLPIGVFSNYPATFPLVLRF-VKQLQPKIVVSLDR 580 (706)
Q Consensus 530 ~~~~l~Lr-~~~dEaLAVN~~~~~l~~~p~~~~~vL~~-IRsL~PkVVVlvEq 580 (706)
. +. ...=++|+++... .....+|+. .+.|+|.-+++++.
T Consensus 130 ~-----~~~~~~fD~V~~d~~~-------~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 130 S-----LGECPAFDLIFIDADK-------PNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp T-----CCSCCCCSEEEECSCG-------GGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred h-----cCCCCCeEEEEECCch-------HHHHHHHHHHHHhcCCCeEEEEeC
Confidence 0 11 0122466666431 123455555 47899999888854
No 146
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=46.70 E-value=39 Score=34.06 Aligned_cols=131 Identities=11% Similarity=0.080 Sum_probs=65.8
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc--------CCcEEEEEeec
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI--------NIPFELEILSL 524 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l--------gVpFEF~~V~l 524 (706)
-+|+|+|.|.|. +...++.+ +.-+||+|+.. +.-++.+.+++ +.+..+ +-.++|..-..
T Consensus 77 ~~VLdiG~G~G~----~~~~l~~~----~~~~v~~vDid----~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~ 143 (281)
T 1mjf_A 77 KRVLVIGGGDGG----TVREVLQH----DVDEVIMVEID----EDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDG 143 (281)
T ss_dssp CEEEEEECTTSH----HHHHHTTS----CCSEEEEEESC----HHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCH
T ss_pred CeEEEEcCCcCH----HHHHHHhC----CCCEEEEEECC----HHHHHHHHHHH-hhccccccccccCCCCcEEEEECch
Confidence 479999999883 55666655 24699999853 33455555555 332111 12244433211
Q ss_pred ccccccCCCCCCCCCCCceEEEecCcccccCCCCC--HHHHHHHH-HhcCCcEEEEeecCCCCCCCChHHHHHHHHHHHH
Q 005237 525 ETLISASWPLPLQGLENDVTAVNLPIGVFSNYPAT--FPLVLRFV-KQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYS 601 (706)
Q Consensus 525 esL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~--~~~vL~~I-RsL~PkVVVlvEqeadhns~~F~~RF~EAL~yYs 601 (706)
.++.. ....=++|+++.+.+. ..+.. ...+++.+ +.|+|.-++++..++-... ...+........
T Consensus 144 ~~~l~-------~~~~fD~Ii~d~~~~~--~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~---~~~~~~~~~~l~ 211 (281)
T 1mjf_A 144 FEFIK-------NNRGFDVIIADSTDPV--GPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLF---TDELISAYKEMK 211 (281)
T ss_dssp HHHHH-------HCCCEEEEEEECCCCC-------TTSHHHHHHHHHHEEEEEEEEEEEEETTTS---HHHHHHHHHHHH
T ss_pred HHHhc-------ccCCeeEEEECCCCCC--CcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC---HHHHHHHHHHHH
Confidence 11100 0012257778765321 11111 25666665 6789999888874432111 233444444444
Q ss_pred HHhhhhh
Q 005237 602 GLLESLD 608 (706)
Q Consensus 602 AlFDSLD 608 (706)
.+|....
T Consensus 212 ~~f~~v~ 218 (281)
T 1mjf_A 212 KVFDRVY 218 (281)
T ss_dssp HHCSEEE
T ss_pred HHCCceE
Confidence 5555433
No 147
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=46.50 E-value=1.1e+02 Score=29.27 Aligned_cols=102 Identities=13% Similarity=0.091 Sum_probs=55.0
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEEEeeccccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELEILSLETLISA 530 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~~V~lesL~~~ 530 (706)
.-+|+|+|.|.|.-=. .||.+ .|..++|+|+.. +..++ .+.+.++..|++ ++|..-.++++...
T Consensus 71 ~~~vLDiG~G~G~~~~----~la~~---~~~~~v~~vD~s----~~~~~----~a~~~~~~~~~~~v~~~~~d~~~~~~~ 135 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSL----PIKIC---FPHLHVTIVDSL----NKRIT----FLEKLSEALQLENTTFCHDRAETFGQR 135 (240)
T ss_dssp CCEEEEECSSSCTTHH----HHHHH---CTTCEEEEEESC----HHHHH----HHHHHHHHHTCSSEEEEESCHHHHTTC
T ss_pred CCEEEEecCCCCHHHH----HHHHh---CCCCEEEEEeCC----HHHHH----HHHHHHHHcCCCCEEEEeccHHHhccc
Confidence 3589999999886322 22321 134689999864 22233 333445556763 55554333333210
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
.... ..=++|+.+. + ...+.+++.+ +-|+|.-.+++..
T Consensus 136 ---~~~~-~~fD~V~~~~----~----~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 136 ---KDVR-ESYDIVTARA----V----ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp ---TTTT-TCEEEEEEEC----C----SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ---cccc-CCccEEEEec----c----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 0000 0113444443 1 2467888887 7899998877653
No 148
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=44.87 E-value=1.2e+02 Score=31.36 Aligned_cols=113 Identities=16% Similarity=-0.005 Sum_probs=61.7
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFE 518 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFE 518 (706)
.+|++.+.-.+.-.|+|+|.|.|. |...++.+ + ..+++||+.. + .++.+.++ ++..|+ ..+
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~gvD~s----~-~~~~a~~~----~~~~~~~~~i~ 116 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA-G---AKKVLGVDQS----E-ILYQAMDI----IRLNKLEDTIT 116 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT-T---CSEEEEEESS----T-HHHHHHHH----HHHTTCTTTEE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc-C---CCEEEEEChH----H-HHHHHHHH----HHHcCCCCcEE
Confidence 566666554455589999999985 44456655 2 3589999864 1 24444333 334454 355
Q ss_pred EEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 519 LEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 519 F~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
|..-.++++ .+....=++|+.|.....+ .....++.+|+.+ |-|+|..+++.
T Consensus 117 ~~~~d~~~~-------~~~~~~~D~Ivs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 117 LIKGKIEEV-------HLPVEKVDVIISEWMGYFL-LFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EEESCTTTS-------CCSCSCEEEEEECCCBTTB-TTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEEeeHHHh-------cCCCCcEEEEEEcCchhhc-cCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 543222222 1111112466666532222 1223466777776 67999987763
No 149
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=44.83 E-value=67 Score=33.73 Aligned_cols=135 Identities=10% Similarity=0.066 Sum_probs=66.4
Q ss_pred CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccc
Q 005237 450 CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLIS 529 (706)
Q Consensus 450 ~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~ 529 (706)
.+.++|+|+|.|.| .+...|+++. |..+||+|+.. +.-++.+.+++.. ..+-.++|..-...++..
T Consensus 88 p~~~rVLdIG~G~G----~la~~la~~~---p~~~v~~VEid----p~vi~~Ar~~~~~---~~~~rv~v~~~Da~~~l~ 153 (317)
T 3gjy_A 88 ASKLRITHLGGGAC----TMARYFADVY---PQSRNTVVELD----AELARLSREWFDI---PRAPRVKIRVDDARMVAE 153 (317)
T ss_dssp GGGCEEEEESCGGG----HHHHHHHHHS---TTCEEEEEESC----HHHHHHHHHHSCC---CCTTTEEEEESCHHHHHH
T ss_pred CCCCEEEEEECCcC----HHHHHHHHHC---CCcEEEEEECC----HHHHHHHHHhccc---cCCCceEEEECcHHHHHh
Confidence 34689999999988 5566666532 24589999853 2223333332210 001124443321111110
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCC--HHHHHHHH-HhcCCcEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhh
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPAT--FPLVLRFV-KQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLES 606 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~--~~~vL~~I-RsL~PkVVVlvEqeadhns~~F~~RF~EAL~yYsAlFDS 606 (706)
.+.-..=++|++++..+. ..+.. ...|++.+ +.|+|.-++++.-.. +. + ...+...+.-...+|..
T Consensus 154 -----~~~~~~fDvIi~D~~~~~--~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~-~~--~-~~~~~~~~~tL~~vF~~ 222 (317)
T 3gjy_A 154 -----SFTPASRDVIIRDVFAGA--ITPQNFTTVEFFEHCHRGLAPGGLYVANCGD-HS--D-LRGAKSELAGMMEVFEH 222 (317)
T ss_dssp -----TCCTTCEEEEEECCSTTS--CCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE-CT--T-CHHHHHHHHHHHHHCSE
T ss_pred -----hccCCCCCEEEECCCCcc--ccchhhhHHHHHHHHHHhcCCCcEEEEEecC-Cc--c-hHHHHHHHHHHHHHCCc
Confidence 011112368888764331 11111 25677776 679999988775542 11 1 23333444444555655
Q ss_pred hhc
Q 005237 607 LDS 609 (706)
Q Consensus 607 LDa 609 (706)
...
T Consensus 223 v~~ 225 (317)
T 3gjy_A 223 VAV 225 (317)
T ss_dssp EEE
T ss_pred eEE
Confidence 443
No 150
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=44.59 E-value=1.3e+02 Score=28.59 Aligned_cols=104 Identities=12% Similarity=-0.002 Sum_probs=52.9
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeeccccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISA 530 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~ 530 (706)
..-+|+|+|.|.|.- ...|+.+-+ |.-+++||+.. + .+-+.+.+.|+.. -..+|....+++...
T Consensus 77 ~~~~vLDlG~G~G~~----~~~la~~~g--~~~~v~gvD~s----~----~~i~~~~~~a~~~-~~v~~~~~d~~~~~~- 140 (233)
T 2ipx_A 77 PGAKVLYLGAASGTT----VSHVSDIVG--PDGLVYAVEFS----H----RSGRDLINLAKKR-TNIIPVIEDARHPHK- 140 (233)
T ss_dssp TTCEEEEECCTTSHH----HHHHHHHHC--TTCEEEEECCC----H----HHHHHHHHHHHHC-TTEEEECSCTTCGGG-
T ss_pred CCCEEEEEcccCCHH----HHHHHHHhC--CCcEEEEEECC----H----HHHHHHHHHhhcc-CCeEEEEcccCChhh-
Confidence 345799999998863 333443321 23589999854 1 1223344555553 234444322222110
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCHHHHHH-HHHhcCCcEEEEee
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLR-FVKQLQPKIVVSLD 579 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~-~IRsL~PkVVVlvE 579 (706)
+......=++|+.|.+ .+.....++. ..+.|+|.-.++++
T Consensus 141 ---~~~~~~~~D~V~~~~~------~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 141 ---YRMLIAMVDVIFADVA------QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp ---GGGGCCCEEEEEECCC------CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---hcccCCcEEEEEEcCC------CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 0011011145666543 2233345555 77899999888774
No 151
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=44.56 E-value=1.2e+02 Score=29.14 Aligned_cols=108 Identities=15% Similarity=0.132 Sum_probs=57.5
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FEL 519 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF 519 (706)
.|++.+.-...-+|+|+|.|.|.--..|.+.+ .|..++++|+.. +..++.+.+++. ..|++ .+|
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~~----~~~~~~a~~~~~----~~~~~~~v~~ 149 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEIR----EDFAKLAWENIK----WAGFDDRVTI 149 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSC----HHHHHHHHHHHH----HHTCTTTEEE
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEecC----HHHHHHHHHHHH----HcCCCCceEE
Confidence 56666655556689999999985444443333 135689999853 233444444443 44654 555
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEee
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLD 579 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvE 579 (706)
..-.+.+ . +....=++|+.|.+ .....+-+..+.|+|.-.+++.
T Consensus 150 ~~~d~~~--~------~~~~~~D~v~~~~~--------~~~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 150 KLKDIYE--G------IEEENVDHVILDLP--------QPERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp ECSCGGG--C------CCCCSEEEEEECSS--------CGGGGHHHHHHHEEEEEEEEEE
T ss_pred EECchhh--c------cCCCCcCEEEECCC--------CHHHHHHHHHHHcCCCCEEEEE
Confidence 4432211 1 11111245555532 2222334445678998877763
No 152
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=43.86 E-value=82 Score=29.17 Aligned_cols=102 Identities=17% Similarity=0.124 Sum_probs=52.0
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEI 521 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~ 521 (706)
.+++.+.. +.-.|+|+|.|.|. +...| + .-++|+|+.. +..++.+.+++ -.++|..
T Consensus 28 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~---~~~v~~vD~s----~~~~~~a~~~~--------~~~~~~~ 83 (211)
T 2gs9_A 28 RALKGLLP-PGESLLEVGAGTGY----WLRRL----P---YPQKVGVEPS----EAMLAVGRRRA--------PEATWVR 83 (211)
T ss_dssp HHHHTTCC-CCSEEEEETCTTCH----HHHHC----C---CSEEEEECCC----HHHHHHHHHHC--------TTSEEEC
T ss_pred HHHHHhcC-CCCeEEEECCCCCH----hHHhC----C---CCeEEEEeCC----HHHHHHHHHhC--------CCcEEEE
Confidence 34444444 55689999999884 22223 1 1289999854 22233333332 2233333
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
..++++ .+....=++|+.+..++.+. ....+|+.+ +.|+|.-.+++
T Consensus 84 ~d~~~~-------~~~~~~fD~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 84 AWGEAL-------PFPGESFDVVLLFTTLEFVE----DVERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp CCTTSC-------CSCSSCEEEEEEESCTTTCS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccC-------CCCCCcEEEEEEcChhhhcC----CHHHHHHHHHHHcCCCCEEEE
Confidence 222211 11111125666666555442 345666665 67899876654
No 153
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=43.56 E-value=47 Score=34.43 Aligned_cols=134 Identities=12% Similarity=0.102 Sum_probs=68.0
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc-CCcEEEEEeeccc-ccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI-NIPFELEILSLET-LIS 529 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l-gVpFEF~~V~les-L~~ 529 (706)
.-+|+|+|.|.|. +...|+.+ +|..+||+|+.. +.-++.+.+++.+.+..+ +-.++|..-...+ +..
T Consensus 109 ~~~VLdIG~G~G~----~~~~l~~~---~~~~~v~~vDid----~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~ 177 (314)
T 2b2c_A 109 PKRVLIIGGGDGG----ILREVLKH---ESVEKVTMCEID----EMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN 177 (314)
T ss_dssp CCEEEEESCTTSH----HHHHHTTC---TTCCEEEEECSC----HHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH
T ss_pred CCEEEEEcCCcCH----HHHHHHHc---CCCCEEEEEECC----HHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh
Confidence 3579999999885 45566654 346799999853 333455555443322112 1234443321111 111
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCH--HHHHHHH-HhcCCcEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhh
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATF--PLVLRFV-KQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLES 606 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~--~~vL~~I-RsL~PkVVVlvEqeadhns~~F~~RF~EAL~yYsAlFDS 606 (706)
....=++|++|...+ +.. +..+ ..+++.+ +.|+|.-+++++.+.-.. -...+.....+...+|..
T Consensus 178 -------~~~~fD~Ii~d~~~~-~~~-~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~~vF~~ 245 (314)
T 2b2c_A 178 -------HKNEFDVIITDSSDP-VGP-AESLFGQSYYELLRDALKEDGILSSQGESVWL---HLPLIAHLVAFNRKIFPA 245 (314)
T ss_dssp -------CTTCEEEEEECCC---------------HHHHHHHHEEEEEEEEEECCCTTT---CHHHHHHHHHHHHHHCSE
T ss_pred -------cCCCceEEEEcCCCC-CCc-chhhhHHHHHHHHHhhcCCCeEEEEECCCccc---CHHHHHHHHHHHHHHCCc
Confidence 001225777776422 110 1111 4566665 689999999887542211 134555666666677765
Q ss_pred hh
Q 005237 607 LD 608 (706)
Q Consensus 607 LD 608 (706)
..
T Consensus 246 v~ 247 (314)
T 2b2c_A 246 VT 247 (314)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 154
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=43.04 E-value=38 Score=34.90 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=53.1
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeeccccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISA 530 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~ 530 (706)
+.-+|+|+|.|.|. +...|+.+. |.+++|+++.+ .-+ +.|+... ..+|..-.+ +++
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-----~~~--------~~a~~~~-~v~~~~~d~--~~~- 243 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDRP-----QVV--------ENLSGSN-NLTYVGGDM--FTS- 243 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-----HHH--------TTCCCBT-TEEEEECCT--TTC-
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeCH-----HHH--------hhcccCC-CcEEEeccc--cCC-
Confidence 44689999999984 455555543 46799999853 111 1232221 144443221 111
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCC---cE-EEEeecC
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQP---KI-VVSLDRS 581 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~P---kV-VVlvEqe 581 (706)
+. .-++++.+..+|.+.. .....+|+.+ +.|+| .- ++++|..
T Consensus 244 -----~p--~~D~v~~~~~lh~~~d--~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 244 -----IP--NADAVLLKYILHNWTD--KDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp -----CC--CCSEEEEESCGGGSCH--HHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred -----CC--CccEEEeehhhccCCH--HHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 11 2457777776665432 1123677776 56899 43 4455543
No 155
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=42.76 E-value=80 Score=30.48 Aligned_cols=112 Identities=10% Similarity=0.060 Sum_probs=58.2
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEEEeecccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELEILSLETLIS 529 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~~V~lesL~~ 529 (706)
+.-.|+|+|.|.|.-. -.||.+. |..+++||+.. +..+.. ..+-++..|+. ++|..-.+.++-+
T Consensus 34 ~~~~vLDiGcG~G~~~----~~lA~~~---p~~~v~giD~s----~~~l~~----a~~~~~~~~l~nv~~~~~Da~~~l~ 98 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASL----VAMAKDR---PEQDFLGIEVH----SPGVGA----CLASAHEEGLSNLRVMCHDAVEVLH 98 (218)
T ss_dssp CCCEEEEESCTTCHHH----HHHHHHC---TTSEEEEECSC----HHHHHH----HHHHHHHTTCSSEEEECSCHHHHHH
T ss_pred CCCeEEEEeeeChHHH----HHHHHHC---CCCeEEEEEec----HHHHHH----HHHHHHHhCCCcEEEEECCHHHHHH
Confidence 4557999999998543 3444332 45689999854 223333 33445566663 5554433222211
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCC----CCCHHHHHHHH-HhcCCcEEEEeecC
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNY----PATFPLVLRFV-KQLQPKIVVSLDRS 581 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~----p~~~~~vL~~I-RsL~PkVVVlvEqe 581 (706)
.. +....=+.|.+|++..-.... .-..+.+|+.+ +.|+|.-++.+.-+
T Consensus 99 ~~----~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 99 KM----IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp HH----SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred HH----cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 00 110111467777543110000 00013578777 56999998887654
No 156
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=42.61 E-value=93 Score=30.55 Aligned_cols=107 Identities=20% Similarity=0.073 Sum_probs=57.1
Q ss_pred HHHHHHhhcc--CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcE
Q 005237 440 NQALLEAFEG--CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPF 517 (706)
Q Consensus 440 NQAILEA~eG--~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpF 517 (706)
.+.++++++. ...-+|+|+|.|.|. +...++.+ |+ ++|||+.. +..++.+.++ ++..|+.+
T Consensus 107 t~~~~~~l~~~~~~~~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~----~~~v~~a~~n----~~~~~~~v 169 (254)
T 2nxc_A 107 TRLALKALARHLRPGDKVLDLGTGSGV----LAIAAEKL--GG---KALGVDID----PMVLPQAEAN----AKRNGVRP 169 (254)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESC----GGGHHHHHHH----HHHTTCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcH----HHHHHHHh--CC---eEEEEECC----HHHHHHHHHH----HHHcCCcE
Confidence 3344444431 234579999999886 33345543 33 99999854 3345555444 34556665
Q ss_pred EEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 518 ELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 518 EF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
+|..-.+.+. +....=++|+.|...+ .+..++..+ +.|+|.-.+++
T Consensus 170 ~~~~~d~~~~--------~~~~~fD~Vv~n~~~~-------~~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 170 RFLEGSLEAA--------LPFGPFDLLVANLYAE-------LHAALAPRYREALVPGGRALL 216 (254)
T ss_dssp EEEESCHHHH--------GGGCCEEEEEEECCHH-------HHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECChhhc--------CcCCCCCEEEECCcHH-------HHHHHHHHHHHHcCCCCEEEE
Confidence 5443222111 1111225777775432 134455544 67899876665
No 157
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=42.28 E-value=12 Score=37.63 Aligned_cols=48 Identities=10% Similarity=0.272 Sum_probs=28.7
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHH
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHF 509 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~f 509 (706)
+.-.|+|+|.|.| .+...|+.+-+ ..+||||+.. +.-++.+.+++..+
T Consensus 46 ~~~~VLDiGCG~G----~~~~~la~~~~---~~~v~gvDis----~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 46 RGRDVLDLGCNVG----HLTLSIACKWG---PSRMVGLDID----SRLIHSARQNIRHY 93 (292)
T ss_dssp TTSEEEEESCTTC----HHHHHHHHHTC---CSEEEEEESC----HHHHHHHHHTC---
T ss_pred CCCcEEEeCCCCC----HHHHHHHHHcC---CCEEEEECCC----HHHHHHHHHHHHhh
Confidence 4457999999998 34445555432 2499999964 33455555555443
No 158
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=41.29 E-value=2.2e+02 Score=26.96 Aligned_cols=110 Identities=10% Similarity=0.074 Sum_probs=56.7
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEEEeecccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELEILSLETLIS 529 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~~V~lesL~~ 529 (706)
+.-.|+|+|.|.|.- .-.||.+. |..++|||+.. +..++.+.++ ++..|++ ++|....+.++..
T Consensus 38 ~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~giD~s----~~~l~~a~~~----~~~~~~~nv~~~~~d~~~l~~ 102 (213)
T 2fca_A 38 DNPIHIEVGTGKGQF----ISGMAKQN---PDINYIGIELF----KSVIVTAVQK----VKDSEAQNVKLLNIDADTLTD 102 (213)
T ss_dssp CCCEEEEECCTTSHH----HHHHHHHC---TTSEEEEECSC----HHHHHHHHHH----HHHSCCSSEEEECCCGGGHHH
T ss_pred CCceEEEEecCCCHH----HHHHHHHC---CCCCEEEEEec----hHHHHHHHHH----HHHcCCCCEEEEeCCHHHHHh
Confidence 445699999998854 33445442 45789999854 2234433333 4455663 5554433332221
Q ss_pred cCCCCCCCCCCCceEEEecCcccccC---C-CCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSN---Y-PATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~---~-p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
. +....=+.|.+|++...... . .-..+.+|+.+ +.|+|.-.+++.-
T Consensus 103 ~-----~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 103 V-----FEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp H-----CCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred h-----cCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 0 11011136667764311100 0 00124667666 5699998777654
No 159
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=40.30 E-value=2.8e+02 Score=27.38 Aligned_cols=114 Identities=14% Similarity=0.047 Sum_probs=59.3
Q ss_pred HHHHHhhc---cCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcE
Q 005237 441 QALLEAFE---GCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPF 517 (706)
Q Consensus 441 QAILEA~e---G~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpF 517 (706)
.+|+++++ =...=+|+|+|.+.|. |...|-.+... .=+|+||+.. + ...+.|.+.|+.. -..
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v~~-----~G~V~avD~s----~----~~l~~l~~~a~~r-~nv 127 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDIIEL-----NGKAYGVEFS----P----RVVRELLLVAQRR-PNI 127 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHHTT-----TSEEEEEECC----H----HHHHHHHHHHHHC-TTE
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHhCC-----CCEEEEEECc----H----HHHHHHHHHhhhc-CCe
Confidence 45556554 2334579999999998 77777666522 2389999853 1 1223455566543 123
Q ss_pred EEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHH-hcCCcEEEEee
Q 005237 518 ELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVK-QLQPKIVVSLD 579 (706)
Q Consensus 518 EF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IR-sL~PkVVVlvE 579 (706)
++.. .+.-.+... ..+ ...=++|.+|.+. |.....++..++ .|+|.-.+++.
T Consensus 128 ~~i~--~Da~~~~~~-~~~-~~~~D~I~~d~a~------~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 128 FPLL--ADARFPQSY-KSV-VENVDVLYVDIAQ------PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEE--CCTTCGGGT-TTT-CCCEEEEEECCCC------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEE--cccccchhh-hcc-ccceEEEEecCCC------hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 3322 111111000 001 1112466666432 333445566666 89998766643
No 160
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=37.97 E-value=1.9e+02 Score=28.63 Aligned_cols=33 Identities=12% Similarity=-0.007 Sum_probs=23.8
Q ss_pred CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCC
Q 005237 450 CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSS 491 (706)
Q Consensus 450 ~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~p 491 (706)
.+.-.|+|+|.|.|.- +..||.+ | .++|||+.+
T Consensus 67 ~~~~~vLD~GCG~G~~----~~~La~~-G----~~V~gvD~S 99 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIE----MKWFADR-G----HTVVGVEIS 99 (252)
T ss_dssp CCSCEEEETTCTTCTH----HHHHHHT-T----CEEEEECSC
T ss_pred CCCCeEEEeCCCCcHH----HHHHHHC-C----CeEEEEECC
Confidence 3456899999998853 4557765 2 389999864
No 161
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=37.88 E-value=1.1e+02 Score=32.88 Aligned_cols=99 Identities=16% Similarity=0.146 Sum_probs=52.1
Q ss_pred EEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEee--cccccccC
Q 005237 454 HIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILS--LETLISAS 531 (706)
Q Consensus 454 HIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~--lesL~~~~ 531 (706)
+|+|+|.|.| +-++ +|.|.|. -|++||+... -+. ...+.++..|+.=....+. +++++
T Consensus 86 ~VLDvG~GtG--iLs~---~Aa~aGA---~~V~ave~s~-----~~~----~a~~~~~~n~~~~~i~~i~~~~~~~~--- 145 (376)
T 4hc4_A 86 TVLDVGAGTG--ILSI---FCAQAGA---RRVYAVEASA-----IWQ----QAREVVRFNGLEDRVHVLPGPVETVE--- 145 (376)
T ss_dssp EEEEETCTTS--HHHH---HHHHTTC---SEEEEEECST-----THH----HHHHHHHHTTCTTTEEEEESCTTTCC---
T ss_pred EEEEeCCCcc--HHHH---HHHHhCC---CEEEEEeChH-----HHH----HHHHHHHHcCCCceEEEEeeeeeeec---
Confidence 5899988887 3344 4445442 2899998531 122 2233455556643333332 22222
Q ss_pred CCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEe
Q 005237 532 WPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSL 578 (706)
Q Consensus 532 ~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlv 578 (706)
+. ..=++|+-++ ++...-..+.++.+|... |-|+|..+++-
T Consensus 146 ----lp-e~~DvivsE~-~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 146 ----LP-EQVDAIVSEW-MGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ----CS-SCEEEEECCC-CBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ----CC-ccccEEEeec-ccccccccchhhhHHHHHHhhCCCCceECC
Confidence 11 0112333333 233323345688888877 67888877663
No 162
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=37.07 E-value=1.3e+02 Score=28.24 Aligned_cols=32 Identities=13% Similarity=-0.024 Sum_probs=22.4
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCC
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSS 491 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~p 491 (706)
+.-+|+|+|.|.|.- ...||.+ + .++|||+.+
T Consensus 22 ~~~~vLD~GCG~G~~----~~~la~~-g----~~V~gvD~S 53 (203)
T 1pjz_A 22 PGARVLVPLCGKSQD----MSWLSGQ-G----YHVVGAELS 53 (203)
T ss_dssp TTCEEEETTTCCSHH----HHHHHHH-C----CEEEEEEEC
T ss_pred CCCEEEEeCCCCcHh----HHHHHHC-C----CeEEEEeCC
Confidence 445899999988843 3446654 2 389999964
No 163
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=37.06 E-value=1.8e+02 Score=29.49 Aligned_cols=71 Identities=13% Similarity=0.112 Sum_probs=45.6
Q ss_pred CccchhHHHHHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHH
Q 005237 430 PILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHF 509 (706)
Q Consensus 430 P~lkFAhftANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~f 509 (706)
+=.++.|-+....|++.+.-...-.|+|+|.|.|.-=..|.+.+ .|.-++++|+.. +..++.+.+++.++
T Consensus 84 ~~~~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~------g~~~~v~~vD~~----~~~~~~a~~~~~~~ 153 (336)
T 2b25_A 84 RGTAITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAV------GSQGRVISFEVR----KDHHDLAKKNYKHW 153 (336)
T ss_dssp CSSCCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHH------CTTCEEEEEESS----HHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHh------CCCceEEEEeCC----HHHHHHHHHHHHHh
Confidence 33455666666777777765555689999999986444444333 235689999853 34466666776665
Q ss_pred H
Q 005237 510 A 510 (706)
Q Consensus 510 A 510 (706)
-
T Consensus 154 ~ 154 (336)
T 2b25_A 154 R 154 (336)
T ss_dssp H
T ss_pred h
Confidence 4
No 164
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=37.03 E-value=2.4e+02 Score=26.31 Aligned_cols=56 Identities=14% Similarity=0.036 Sum_probs=33.4
Q ss_pred HHHHhhc--cCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHH
Q 005237 442 ALLEAFE--GCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLK 507 (706)
Q Consensus 442 AILEA~e--G~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~ 507 (706)
.+++.+. -...-+|+|+|.|.|.--..|.+.+ .|..+||+|+.. +..++.+.+++.
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~------~~~~~v~~vD~s----~~~~~~a~~~~~ 123 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMV------GCTGKVIGIDHI----KELVDDSVNNVR 123 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHH------CTTCEEEEEESC----HHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHh------CCCcEEEEEeCC----HHHHHHHHHHHH
Confidence 4555554 2345689999999886544444433 134589999853 233454555543
No 165
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=35.69 E-value=1.6e+02 Score=27.58 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=54.2
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEI 521 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~ 521 (706)
.|++.+.-...-+|+|+|.|.|.--. .|+.+. -++|+|+.. +..++.+.++ ++..+ ..+|..
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~----~l~~~~-----~~v~~vD~~----~~~~~~a~~~----~~~~~-~v~~~~ 122 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTA----LIAEIV-----DKVVSVEIN----EKMYNYASKL----LSYYN-NIKLIL 122 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHH----HHHHHS-----SEEEEEESC----HHHHHHHHHH----HTTCS-SEEEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHH----HHHHHc-----CEEEEEeCC----HHHHHHHHHH----HhhcC-CeEEEE
Confidence 45555554455689999999886433 333331 489999853 2233333333 33344 445443
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEee
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLD 579 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvE 579 (706)
....+ . + . ....=++|+++..++.+. + ...+.|+|.-.+++.
T Consensus 123 ~d~~~--~--~--~-~~~~fD~v~~~~~~~~~~------~---~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 123 GDGTL--G--Y--E-EEKPYDRVVVWATAPTLL------C---KPYEQLKEGGIMILP 164 (231)
T ss_dssp SCGGG--C--C--G-GGCCEEEEEESSBBSSCC------H---HHHHTEEEEEEEEEE
T ss_pred CCccc--c--c--c-cCCCccEEEECCcHHHHH------H---HHHHHcCCCcEEEEE
Confidence 22211 0 0 0 011225677776554321 2 345788898766654
No 166
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=35.18 E-value=1.3e+02 Score=28.46 Aligned_cols=100 Identities=14% Similarity=0.147 Sum_probs=53.3
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeeccccccc
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLISA 530 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~~~ 530 (706)
-+|+|+|.|.|.-=. .|+.+- |..+||+|+.. +..++.+.++ ++..|+. ++|......+..+.
T Consensus 56 ~~vLdiG~G~G~~~~----~la~~~---~~~~v~~vD~~----~~~~~~a~~~----~~~~~~~~~v~~~~~d~~~~~~~ 120 (233)
T 2gpy_A 56 ARILEIGTAIGYSAI----RMAQAL---PEATIVSIERD----ERRYEEAHKH----VKALGLESRIELLFGDALQLGEK 120 (233)
T ss_dssp SEEEEECCTTSHHHH----HHHHHC---TTCEEEEECCC----HHHHHHHHHH----HHHTTCTTTEEEECSCGGGSHHH
T ss_pred CEEEEecCCCcHHHH----HHHHHC---CCCEEEEEECC----HHHHHHHHHH----HHHcCCCCcEEEEECCHHHHHHh
Confidence 479999999875322 333322 24699999853 2234433333 4455653 55544322211010
Q ss_pred CCCCCCC-CCCCceEEEecCcccccCCCCCHHHHHHH-HHhcCCcEEEEee
Q 005237 531 SWPLPLQ-GLENDVTAVNLPIGVFSNYPATFPLVLRF-VKQLQPKIVVSLD 579 (706)
Q Consensus 531 ~~~l~Lr-~~~dEaLAVN~~~~~l~~~p~~~~~vL~~-IRsL~PkVVVlvE 579 (706)
+. -..=++|+++.... ....+|+. .+.|+|.-+++++
T Consensus 121 -----~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 121 -----LELYPLFDVLFIDAAKG-------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp -----HTTSCCEEEEEEEGGGS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred -----cccCCCccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 00 01225677775432 24455555 4779999988875
No 167
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=35.08 E-value=2e+02 Score=29.45 Aligned_cols=85 Identities=14% Similarity=0.209 Sum_probs=50.3
Q ss_pred CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeecccccc
Q 005237 450 CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLIS 529 (706)
Q Consensus 450 ~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~ 529 (706)
.+..+|+|.+.|.|.--..+.+.+.... ....+|+|++.. +..++.+..++. ..|+..+|. ..+.+..
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~--~~~~~v~GiDi~----~~~~~~a~~n~~----~~g~~~~i~--~~D~l~~ 196 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKG--DVDVHASGVDVD----DLLISLALVGAD----LQRQKMTLL--HQDGLAN 196 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTS--SCEEEEEEEESC----HHHHHHHHHHHH----HHTCCCEEE--ESCTTSC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhc--CCCceEEEEECC----HHHHHHHHHHHH----hCCCCceEE--ECCCCCc
Confidence 4678999999999987777777775322 135899999853 333444444443 235544333 2233332
Q ss_pred cCCCCCCCCCCCceEEEecCccc
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGV 552 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~ 552 (706)
.....=++|+.|-|++.
T Consensus 197 ------~~~~~fD~Ii~NPPfg~ 213 (344)
T 2f8l_A 197 ------LLVDPVDVVISDLPVGY 213 (344)
T ss_dssp ------CCCCCEEEEEEECCCSE
T ss_pred ------cccCCccEEEECCCCCC
Confidence 11112358888988754
No 168
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=34.99 E-value=45 Score=31.42 Aligned_cols=40 Identities=25% Similarity=0.206 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHHHHHhcCChHHHHHHHHHHhhhcCCCCChh
Q 005237 344 QQAVIDQIFKAAELIEMGNPVLAQGILARLNHQLSPVVKPF 384 (706)
Q Consensus 344 ~~~Lv~lLl~CAeAVesgn~~~A~~iLa~L~~~aSp~Gdp~ 384 (706)
+..+-+-|-+|++++++||...|+.||..-. ..-|+||-.
T Consensus 55 r~EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gdL~ 94 (137)
T 2ksn_A 55 RKEIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGALT 94 (137)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCCSS
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCcHH
Confidence 4478899999999999999999999998654 334778643
No 169
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=34.77 E-value=3e+02 Score=26.06 Aligned_cols=57 Identities=12% Similarity=0.255 Sum_probs=33.5
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHH
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLK 507 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~ 507 (706)
..|++.+.-...-+|+|+|.|.|.--..|.+.+ .|..++|+|+.. +..++.+.+++.
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~~D~~----~~~~~~a~~~~~ 142 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAV------GEKGLVESYEAR----PHHLAQAERNVR 142 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESC----HHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHh------CCCCEEEEEeCC----HHHHHHHHHHHH
Confidence 356666654555689999999885333333333 134589999853 233444444443
No 170
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=34.71 E-value=1.9e+02 Score=27.54 Aligned_cols=107 Identities=13% Similarity=0.092 Sum_probs=56.0
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEEE
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFEL 519 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFEF 519 (706)
..+++.+.-.+.-.|+|+|.|.|..-..|.+.. + .++|+|+.. +..++.+.+++ +..|+ ..+|
T Consensus 81 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~----~----~~v~~vD~~----~~~~~~a~~~~----~~~~~~~v~~ 144 (235)
T 1jg1_A 81 AIMLEIANLKPGMNILEVGTGSGWNAALISEIV----K----TDVYTIERI----PELVEFAKRNL----ERAGVKNVHV 144 (235)
T ss_dssp HHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHH----C----SCEEEEESC----HHHHHHHHHHH----HHTTCCSEEE
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHh----C----CEEEEEeCC----HHHHHHHHHHH----HHcCCCCcEE
Confidence 345555554445579999999876544443332 1 489999853 22344444443 34555 3444
Q ss_pred EEeecccccccCCCCCCCC-CCCceEEEecCcccccCCCCCHHHHHHHHHhcCCcEEEEeec
Q 005237 520 EILSLETLISASWPLPLQG-LENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLDR 580 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~-~~dEaLAVN~~~~~l~~~p~~~~~vL~~IRsL~PkVVVlvEq 580 (706)
..-. +.. .+.. .+-++|+++..++.+. + ...+.|+|.-.+++.-
T Consensus 145 ~~~d---~~~-----~~~~~~~fD~Ii~~~~~~~~~------~---~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 145 ILGD---GSK-----GFPPKAPYDVIIVTAGAPKIP------E---PLIEQLKIGGKLIIPV 189 (235)
T ss_dssp EESC---GGG-----CCGGGCCEEEEEECSBBSSCC------H---HHHHTEEEEEEEEEEE
T ss_pred EECC---ccc-----CCCCCCCccEEEECCcHHHHH------H---HHHHhcCCCcEEEEEE
Confidence 4322 110 1110 1125777776544221 2 3457888987766544
No 171
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=34.17 E-value=74 Score=29.19 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=22.4
Q ss_pred CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCC
Q 005237 450 CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSS 491 (706)
Q Consensus 450 ~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~p 491 (706)
.+.-+|+|+|.|.|.- ...|+.+ ++. +||+|+..
T Consensus 41 ~~~~~vLdiGcG~G~~----~~~l~~~--~~~--~v~~~D~s 74 (215)
T 2pxx_A 41 RPEDRILVLGCGNSAL----SYELFLG--GFP--NVTSVDYS 74 (215)
T ss_dssp CTTCCEEEETCTTCSH----HHHHHHT--TCC--CEEEEESC
T ss_pred CCCCeEEEECCCCcHH----HHHHHHc--CCC--cEEEEeCC
Confidence 3456899999998753 3344444 222 89999854
No 172
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=33.49 E-value=1e+02 Score=28.61 Aligned_cols=38 Identities=11% Similarity=0.161 Sum_probs=24.6
Q ss_pred HHHHhhcc-CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCC
Q 005237 442 ALLEAFEG-CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSS 491 (706)
Q Consensus 442 AILEA~eG-~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~p 491 (706)
.|++.+.. .+.-+|+|+|.|.|.- ...|+ .++|+|+..
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~----~~~l~--------~~v~~~D~s 95 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRL----ASSIR--------NPVHCFDLA 95 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHH----HHHCC--------SCEEEEESS
T ss_pred HHHHHHhccCCCCeEEEECCcCCHH----HHHhh--------ccEEEEeCC
Confidence 45555542 3446899999998863 22332 489999865
No 173
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=33.26 E-value=3.3e+02 Score=26.35 Aligned_cols=59 Identities=10% Similarity=0.175 Sum_probs=34.9
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHH
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHF 509 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~f 509 (706)
..|++.+.-...-.|+|+|.|.|.--..|.+.+ .|..++++|+.. +..++.+.+++..+
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~----~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAV------GPAGQVISYEQR----ADHAEHARRNVSGC 147 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSC----HHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHh------CCCCEEEEEeCC----HHHHHHHHHHHHHh
Confidence 456666654455589999999885333333333 134589999853 33455555555443
No 174
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=33.14 E-value=2.2e+02 Score=27.89 Aligned_cols=108 Identities=13% Similarity=0.081 Sum_probs=55.1
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFEL 519 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFEF 519 (706)
.|++.+.-...-.|+|+|.|.|.- .-.|+.+- .|..++|+|+.. +..++.+.++ ++..|+ ..+|
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~----~~~la~~~--~~~~~v~~vD~s----~~~~~~a~~~----~~~~~~~~~v~~ 168 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAM----CAVLARAV--GSSGKVFAYEKR----EEFAKLAESN----LTKWGLIERVTI 168 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHH----HHHHHHHT--TTTCEEEEECCC----HHHHHHHHHH----HHHTTCGGGEEE
T ss_pred HHHHHhCCCCCCEEEEECCcCCHH----HHHHHHHh--CCCcEEEEEECC----HHHHHHHHHH----HHHcCCCCCEEE
Confidence 455555544455899999998753 33344331 134589999853 2334444444 344465 3444
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHH-HHHhcCCcEEEEeec
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLR-FVKQLQPKIVVSLDR 580 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~-~IRsL~PkVVVlvEq 580 (706)
..-.+.+. +....=++|+.|.+ .. ..+|+ ..+.|+|.-++++..
T Consensus 169 ~~~d~~~~--------~~~~~~D~V~~~~~--------~~-~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 169 KVRDISEG--------FDEKDVDALFLDVP--------DP-WNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp ECCCGGGC--------CSCCSEEEEEECCS--------CG-GGTHHHHHHHEEEEEEEEEEE
T ss_pred EECCHHHc--------ccCCccCEEEECCc--------CH-HHHHHHHHHHcCCCCEEEEEe
Confidence 33222111 11011245555532 22 23344 446789988777654
No 175
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=32.89 E-value=3e+02 Score=27.96 Aligned_cols=68 Identities=22% Similarity=0.107 Sum_probs=38.7
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cE
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PF 517 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pF 517 (706)
+-+.+.+.+.-...-+|+|+|.+.|.--..|.+.+ ++.-+||+++.. +..++.+.++ +++.|+ .+
T Consensus 106 ~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~------~~~~~v~avD~s----~~~l~~a~~~----~~~~g~~~v 171 (315)
T 1ixk_A 106 SSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLM------RNDGVIYAFDVD----ENRLRETRLN----LSRLGVLNV 171 (315)
T ss_dssp HHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHT------TTCSEEEEECSC----HHHHHHHHHH----HHHHTCCSE
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHh------CCCCEEEEEcCC----HHHHHHHHHH----HHHhCCCeE
Confidence 34444555554445579999999987544443332 123589999853 3334444444 455676 34
Q ss_pred EEE
Q 005237 518 ELE 520 (706)
Q Consensus 518 EF~ 520 (706)
+|.
T Consensus 172 ~~~ 174 (315)
T 1ixk_A 172 ILF 174 (315)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 176
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=32.65 E-value=2e+02 Score=28.27 Aligned_cols=107 Identities=14% Similarity=0.150 Sum_probs=53.0
Q ss_pred HHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhc-CCc-EEE
Q 005237 442 ALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEI-NIP-FEL 519 (706)
Q Consensus 442 AILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~l-gVp-FEF 519 (706)
.|++.+.-...-.|+|+|.|.|.--..|.+.+ .|..++|+|+.. +..++.+.++ ++.. |++ .+|
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~------~~~~~v~~vD~s----~~~~~~a~~~----~~~~~g~~~v~~ 166 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYAL------NGKGTLTVVERD----EDNLKKAMDN----LSEFYDIGNVRT 166 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHH------TTSSEEEEECSC----HHHHHHHHHH----HHTTSCCTTEEE
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHc------CCCCEEEEEECC----HHHHHHHHHH----HHhcCCCCcEEE
Confidence 45555554455689999999886444444433 124589999853 2234433333 4444 542 555
Q ss_pred EEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEee
Q 005237 520 EILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLD 579 (706)
Q Consensus 520 ~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvE 579 (706)
....+.+ . +....=++|+++.+ ....+|+.+ +.|+|.-.+++.
T Consensus 167 ~~~d~~~--~------~~~~~fD~Vi~~~~---------~~~~~l~~~~~~LkpgG~l~i~ 210 (275)
T 1yb2_A 167 SRSDIAD--F------ISDQMYDAVIADIP---------DPWNHVQKIASMMKPGSVATFY 210 (275)
T ss_dssp ECSCTTT--C------CCSCCEEEEEECCS---------CGGGSHHHHHHTEEEEEEEEEE
T ss_pred EECchhc--c------CcCCCccEEEEcCc---------CHHHHHHHHHHHcCCCCEEEEE
Confidence 4322211 0 11111245555432 224566655 458998766553
No 177
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=31.98 E-value=3.3e+02 Score=25.65 Aligned_cols=76 Identities=21% Similarity=0.291 Sum_probs=44.6
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC--cEEEEEeeccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI--PFELEILSLETLI 528 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV--pFEF~~V~lesL~ 528 (706)
..-+|+|+|.|.|. +...|+.+ + .+||||+.. +..++.+ .+-++..|+ .++|..-.+.++.
T Consensus 78 ~~~~vLD~gcG~G~----~~~~la~~--~---~~v~~vD~s----~~~~~~a----~~~~~~~~~~~~~~~~~~d~~~~~ 140 (241)
T 3gdh_A 78 KCDVVVDAFCGVGG----NTIQFALT--G---MRVIAIDID----PVKIALA----RNNAEVYGIADKIEFICGDFLLLA 140 (241)
T ss_dssp CCSEEEETTCTTSH----HHHHHHHT--T---CEEEEEESC----HHHHHHH----HHHHHHTTCGGGEEEEESCHHHHG
T ss_pred CCCEEEECccccCH----HHHHHHHc--C---CEEEEEECC----HHHHHHH----HHHHHHcCCCcCeEEEECChHHhc
Confidence 44589999999985 33445544 2 689999854 2234433 344556677 5776654433332
Q ss_pred ccCCCCCCCCCCCceEEEecCcc
Q 005237 529 SASWPLPLQGLENDVTAVNLPIG 551 (706)
Q Consensus 529 ~~~~~l~Lr~~~dEaLAVN~~~~ 551 (706)
.. ..=++|+.|.+++
T Consensus 141 ~~--------~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 141 SF--------LKADVVFLSPPWG 155 (241)
T ss_dssp GG--------CCCSEEEECCCCS
T ss_pred cc--------CCCCEEEECCCcC
Confidence 11 1225788887665
No 178
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=31.85 E-value=94 Score=34.64 Aligned_cols=61 Identities=15% Similarity=0.245 Sum_probs=40.8
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcC-CcEEEEEeeccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEIN-IPFELEILSLETLI 528 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lg-VpFEF~~V~lesL~ 528 (706)
+.+.|+|+|.|-|. |-..||++ |. ++||||.. +..++.+ ...|+.-| +..+|....++++.
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~-ga----~V~giD~~----~~~i~~a----~~~a~~~~~~~~~~~~~~~~~~~ 127 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK-GA----TIVGIDFQ----QENINVC----RALAEENPDFAAEFRVGRIEEVI 127 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT-TC----EEEEEESC----HHHHHHH----HHHHHTSTTSEEEEEECCHHHHH
T ss_pred CCCeEEEECCCCcH----HHHHHHhC-CC----EEEEECCC----HHHHHHH----HHHHHhcCCCceEEEECCHHHHh
Confidence 45789999998885 66788865 32 79999964 2223322 23455555 67888887777663
No 179
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=31.84 E-value=1.6e+02 Score=27.58 Aligned_cols=23 Identities=13% Similarity=0.138 Sum_probs=18.5
Q ss_pred CCChhhHHHHHHhCCCccccCCh
Q 005237 640 PERLPPWRSLFMQSGFAPLTFSN 662 (706)
Q Consensus 640 hE~~~~Wr~Rm~rAGF~pvpLS~ 662 (706)
.-+...|+..++++||+.+.+..
T Consensus 165 ~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 165 FFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEec
Confidence 34668999999999999877653
No 180
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=31.72 E-value=87 Score=29.37 Aligned_cols=106 Identities=13% Similarity=0.108 Sum_probs=55.4
Q ss_pred eEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeeccccccc
Q 005237 453 IHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLISA 530 (706)
Q Consensus 453 VHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~~~ 530 (706)
-+|+|+|.|.|.-- ..|+.+- |+..+||+|+.. +..++.+ .+.++..|+. .+|..-...+..+.
T Consensus 66 ~~vLdiG~G~G~~~----~~la~~~--~~~~~v~~vD~~----~~~~~~a----~~~~~~~~~~~~v~~~~~d~~~~~~~ 131 (225)
T 3tr6_A 66 KKVIDIGTFTGYSA----IAMGLAL--PKDGTLITCDVD----EKSTALA----KEYWEKAGLSDKIGLRLSPAKDTLAE 131 (225)
T ss_dssp SEEEEECCTTSHHH----HHHHTTC--CTTCEEEEEESC----HHHHHHH----HHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred CEEEEeCCcchHHH----HHHHHhC--CCCCEEEEEeCC----HHHHHHH----HHHHHHCCCCCceEEEeCCHHHHHHH
Confidence 38999999988632 3344332 235799999853 2234433 3444556664 66655332211110
Q ss_pred CCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
. ........=++|+++... .....+|+.+ +.|+|.-+++++.
T Consensus 132 ~-~~~~~~~~fD~v~~~~~~-------~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 132 L-IHAGQAWQYDLIYIDADK-------ANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp H-HTTTCTTCEEEEEECSCG-------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred h-hhccCCCCccEEEECCCH-------HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 0 000000112456555431 1244556555 7899999988754
No 181
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=31.56 E-value=1e+02 Score=29.59 Aligned_cols=102 Identities=10% Similarity=0.066 Sum_probs=56.5
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeeccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLI 528 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~ 528 (706)
+.-.|+|+|.+.|.-- ..|+.+ .|..+||+|+.. +..++.+. +.++..|+. .+|..-...+..
T Consensus 71 ~~~~vLDiG~G~G~~~----~~la~~---~~~~~v~~vD~~----~~~~~~a~----~~~~~~~~~~~v~~~~~d~~~~~ 135 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSS----MQFASI---SDDIHVTTIERN----ETMIQYAK----QNLATYHFENQVRIIEGNALEQF 135 (232)
T ss_dssp TCCEEEEECCSSSHHH----HHHHTT---CTTCEEEEEECC----HHHHHHHH----HHHHHTTCTTTEEEEESCGGGCH
T ss_pred CCCEEEEEeCchhHHH----HHHHHh---CCCCEEEEEECC----HHHHHHHH----HHHHHcCCCCcEEEEECCHHHHH
Confidence 3457999999988632 334432 135799999853 22344333 344556663 666543322211
Q ss_pred c-cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 529 S-ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 529 ~-~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
+ . + ...=++|+++... .....+|+.+ +.|+|.-+++++.
T Consensus 136 ~~~-----~-~~~fD~V~~~~~~-------~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 136 ENV-----N-DKVYDMIFIDAAK-------AQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp HHH-----T-TSCEEEEEEETTS-------SSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred Hhh-----c-cCCccEEEEcCcH-------HHHHHHHHHHHHhcCCCeEEEEee
Confidence 1 0 1 0122466666431 2355666665 7899999998853
No 182
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=31.25 E-value=1.5e+02 Score=28.55 Aligned_cols=107 Identities=9% Similarity=-0.001 Sum_probs=56.1
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEEEeeccccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISA 530 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~~V~lesL~~~ 530 (706)
..-+|+|+|.|.|. +...|+++. | -++|+|+.. + .+-++..+.++..+....|.....+++...
T Consensus 60 ~G~rVLdiG~G~G~----~~~~~~~~~---~-~~v~~id~~----~----~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~ 123 (236)
T 3orh_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECN----D----GVFQRLRDWAPRQTHKVIPLKGLWEDVAPT 123 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHTTSC---E-EEEEEEECC----H----HHHHHHHHHGGGCSSEEEEEESCHHHHGGG
T ss_pred CCCeEEEECCCccH----HHHHHHHhC---C-cEEEEEeCC----H----HHHHHHHHHHhhCCCceEEEeehHHhhccc
Confidence 34579999998884 334455432 2 278999853 2 233455666777787777655433333211
Q ss_pred CCCCCCCCCCCceEEEecCcccccCC-CCCHHHHHHH-HHhcCCcEEEEe
Q 005237 531 SWPLPLQGLENDVTAVNLPIGVFSNY-PATFPLVLRF-VKQLQPKIVVSL 578 (706)
Q Consensus 531 ~~~l~Lr~~~dEaLAVN~~~~~l~~~-p~~~~~vL~~-IRsL~PkVVVlv 578 (706)
+....=+.+.+.......... -...+.+|+. .|-|+|.-+.+.
T Consensus 124 -----~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 124 -----LPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp -----SCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred -----ccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 110111344443222111110 0124566664 477999987764
No 183
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=31.17 E-value=43 Score=30.72 Aligned_cols=43 Identities=19% Similarity=0.296 Sum_probs=28.7
Q ss_pred HHHHhhcc-CceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCC
Q 005237 442 ALLEAFEG-CNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSS 491 (706)
Q Consensus 442 AILEA~eG-~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~p 491 (706)
.|++.+.. .+.-+|+|+|.|.|.- ...|+.+. |..++|||+..
T Consensus 20 ~~~~~l~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~~~v~~vD~~ 63 (215)
T 4dzr_A 20 EAIRFLKRMPSGTRVIDVGTGSGCI----AVSIALAC---PGVSVTAVDLS 63 (215)
T ss_dssp HHHHHHTTCCTTEEEEEEESSBCHH----HHHHHHHC---TTEEEEEEECC
T ss_pred HHHHHhhhcCCCCEEEEecCCHhHH----HHHHHHhC---CCCeEEEEECC
Confidence 34455544 5678999999999863 33344332 46799999964
No 184
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=30.62 E-value=2.4e+02 Score=26.27 Aligned_cols=22 Identities=9% Similarity=0.143 Sum_probs=17.4
Q ss_pred CCCChhhHHHHHHhCCCccccC
Q 005237 639 SPERLPPWRSLFMQSGFAPLTF 660 (706)
Q Consensus 639 RhE~~~~Wr~Rm~rAGF~pvpL 660 (706)
|.-+...|+..|++|||+...+
T Consensus 203 ~~~t~~~~~~ll~~aGF~v~~~ 224 (239)
T 3bxo_A 203 TLFHQAEYEAAFTAAGLRVEYL 224 (239)
T ss_dssp ECCCHHHHHHHHHHTTEEEEEE
T ss_pred eecCHHHHHHHHHHCCCEEEEe
Confidence 4456799999999999976554
No 185
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=30.45 E-value=2.2e+02 Score=29.63 Aligned_cols=96 Identities=17% Similarity=0.133 Sum_probs=50.9
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEEEEEeeccccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFELEILSLETLISA 530 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFEF~~V~lesL~~~ 530 (706)
.-.|+|+| |.|.- . ..|+.+ + |..++|+|+.. +..++.+.++ ++..|+ ..+|..-.+.+ .
T Consensus 173 ~~~VLDlG-G~G~~-~---~~la~~--~-~~~~v~~vDi~----~~~l~~a~~~----~~~~g~~~v~~~~~D~~~--~- 233 (373)
T 2qm3_A 173 NKDIFVLG-DDDLT-S---IALMLS--G-LPKRIAVLDID----ERLTKFIEKA----ANEIGYEDIEIFTFDLRK--P- 233 (373)
T ss_dssp TCEEEEES-CTTCH-H---HHHHHH--T-CCSEEEEECSC----HHHHHHHHHH----HHHHTCCCEEEECCCTTS--C-
T ss_pred CCEEEEEC-CCCHH-H---HHHHHh--C-CCCEEEEEECC----HHHHHHHHHH----HHHcCCCCEEEEEChhhh--h-
Confidence 35799999 87752 2 233433 1 34589999853 3345555554 444566 34443322211 0
Q ss_pred CCCCCCCC-CCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcE
Q 005237 531 SWPLPLQG-LENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKI 574 (706)
Q Consensus 531 ~~~l~Lr~-~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkV 574 (706)
+.... ..=++|++|.+++.. ....+|+.+ +.|+|.-
T Consensus 234 ---l~~~~~~~fD~Vi~~~p~~~~-----~~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 234 ---LPDYALHKFDTFITDPPETLE-----AIRAFVGRGIATLKGPR 271 (373)
T ss_dssp ---CCTTTSSCBSEEEECCCSSHH-----HHHHHHHHHHHTBCSTT
T ss_pred ---chhhccCCccEEEECCCCchH-----HHHHHHHHHHHHcccCC
Confidence 11100 122688999876532 135666665 6789954
No 186
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=29.91 E-value=3.7e+02 Score=25.76 Aligned_cols=48 Identities=19% Similarity=0.329 Sum_probs=30.5
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHH
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHF 509 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~f 509 (706)
+.-.|+|+|.|.|.- .-.||.+. |..++|||+.. +..++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~~----~~~la~~~---~~~~v~gvD~s----~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGGL----MIDLSPAF---PEDLILGMEIR----VQVTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSHH----HHHHHHHS---TTSEEEEEESC----HHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHH----HHHHHHhC---CCCCEEEEEcC----HHHHHHHHHHHHHH
Confidence 456899999999863 33444332 35689999854 23455566655544
No 187
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=29.53 E-value=2.3e+02 Score=28.70 Aligned_cols=43 Identities=12% Similarity=0.062 Sum_probs=29.1
Q ss_pred HHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCC
Q 005237 440 NQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSS 491 (706)
Q Consensus 440 NQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~p 491 (706)
.+.|++++.-.+.-.|+|+|.|.|.-- ..|+.+ + -++|||+..
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~lt----~~La~~-~----~~v~~vDi~ 73 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNLT----VKLLPL-A----KKVITIDID 73 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTH----HHHTTT-S----SEEEEECSC
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHHH----HHHHhc-C----CEEEEEECC
Confidence 445666665445568999999998743 455655 2 289999853
No 188
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=28.35 E-value=4.1e+02 Score=27.58 Aligned_cols=99 Identities=10% Similarity=0.057 Sum_probs=53.0
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cEEEEEeecccccc
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PFELEILSLETLIS 529 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pFEF~~V~lesL~~ 529 (706)
..=+|+|+|.|-|. ...++ +|+.++ -+||||+.. +..++.+.+++. ..|+ .++|..-...++.
T Consensus 122 ~g~rVLDIGcG~G~-~ta~~--lA~~~g----a~V~gIDis----~~~l~~Ar~~~~----~~gl~~v~~v~gDa~~l~- 185 (298)
T 3fpf_A 122 RGERAVFIGGGPLP-LTGIL--LSHVYG----MRVNVVEIE----PDIAELSRKVIE----GLGVDGVNVITGDETVID- 185 (298)
T ss_dssp TTCEEEEECCCSSC-HHHHH--HHHTTC----CEEEEEESS----HHHHHHHHHHHH----HHTCCSEEEEESCGGGGG-
T ss_pred CcCEEEEECCCccH-HHHHH--HHHccC----CEEEEEECC----HHHHHHHHHHHH----hcCCCCeEEEECchhhCC-
Confidence 34578999987753 33333 354443 489999853 334555555443 3344 3555432222221
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHHH-HhcCCcEEEEeec
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFV-KQLQPKIVVSLDR 580 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~I-RsL~PkVVVlvEq 580 (706)
-..=++|.++.. . .....+|+.+ |.|+|...+++..
T Consensus 186 --------d~~FDvV~~~a~------~-~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 186 --------GLEFDVLMVAAL------A-EPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp --------GCCCSEEEECTT------C-SCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred --------CCCcCEEEECCC------c-cCHHHHHHHHHHHcCCCcEEEEEc
Confidence 112246665532 1 2345666665 6799998877643
No 189
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=28.20 E-value=3.6e+02 Score=27.56 Aligned_cols=112 Identities=21% Similarity=0.114 Sum_probs=57.5
Q ss_pred HHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc-EEEEE
Q 005237 443 LLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP-FELEI 521 (706)
Q Consensus 443 ILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp-FEF~~ 521 (706)
|++...-...-.|+|.+.|.|. +.-++|.+- .|..+|+|++.. +..++.+.++ ++..|+. .+|..
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~----~~ie~a~~~--~~~~~v~g~Di~----~~~i~~a~~n----~~~~g~~~i~~~~ 260 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGT----IALEAASTL--GPTSPVYAGDLD----EKRLGLAREA----ALASGLSWIRFLR 260 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSH----HHHHHHHHH--CTTSCEEEEESC----HHHHHHHHHH----HHHTTCTTCEEEE
T ss_pred HHHHhCCCCCCEEEeCCCCcCH----HHHHHHHhh--CCCceEEEEECC----HHHHHHHHHH----HHHcCCCceEEEe
Confidence 4444433445579999999985 233333322 145789999853 3345444444 4556764 55554
Q ss_pred eecccccccCCCCCCCCCCCceEEEecCcccccCCCCC----HHHHHHHH-HhcCCcEE
Q 005237 522 LSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPAT----FPLVLRFV-KQLQPKIV 575 (706)
Q Consensus 522 V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~----~~~vL~~I-RsL~PkVV 575 (706)
-.+.++.. ....-++|+.|.|++........ ...+++.+ +.|+|.-.
T Consensus 261 ~D~~~~~~-------~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~ 312 (354)
T 3tma_A 261 ADARHLPR-------FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGR 312 (354)
T ss_dssp CCGGGGGG-------TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCE
T ss_pred CChhhCcc-------ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcE
Confidence 33333321 11122689999887532111011 14566655 46678543
No 190
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=27.49 E-value=1.1e+02 Score=29.04 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=16.9
Q ss_pred ChhhHHHHHHhCCCccccCCh
Q 005237 642 RLPPWRSLFMQSGFAPLTFSN 662 (706)
Q Consensus 642 ~~~~Wr~Rm~rAGF~pvpLS~ 662 (706)
..+.|+..|+.+||+.+.+..
T Consensus 218 ~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 218 GWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp CHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEEE
Confidence 446899999999999887653
No 191
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=27.33 E-value=2e+02 Score=27.97 Aligned_cols=21 Identities=10% Similarity=0.112 Sum_probs=16.8
Q ss_pred ChhhHHHHHHhCCCccccCCh
Q 005237 642 RLPPWRSLFMQSGFAPLTFSN 662 (706)
Q Consensus 642 ~~~~Wr~Rm~rAGF~pvpLS~ 662 (706)
+.+.|+..++.+||+.+.+..
T Consensus 217 ~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 217 EKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp CHHHHHHHHHHTTEEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEee
Confidence 456899999999999877653
No 192
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=25.38 E-value=1.5e+02 Score=32.38 Aligned_cols=120 Identities=11% Similarity=0.019 Sum_probs=62.7
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHH---HHHHHHHHHhcCCc-
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFT---QENLKHFASEINIP- 516 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~t---g~rL~~fA~~lgVp- 516 (706)
..|++.+.-...-.|+|+|.|.|..-..|.+.. + ..+++||+.. +..++.+ -+.+.+-++..|+.
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~----g---~~~V~GVDis----~~~l~~A~~Ml~~ar~~~~~~Gl~~ 300 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC----G---CALSFGCEIM----DDASDLTILQYEELKKRCKLYGMRL 300 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH----C---CSEEEEEECC----HHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC----C---CCEEEEEeCC----HHHHHHHHHhHHHHHHHHHHcCCCC
Confidence 456676665555679999999987655444432 1 3489999864 2223333 23345555667743
Q ss_pred --EEEEEeecccccccCCCCCCCCCCCceEEEecCcccccCCCCCHHHHH-HHHHhcCCcEEEEee
Q 005237 517 --FELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVL-RFVKQLQPKIVVSLD 579 (706)
Q Consensus 517 --FEF~~V~lesL~~~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL-~~IRsL~PkVVVlvE 579 (706)
++|.. .+++.. .|.+......=++|++|..+. . ..++.+| +..+.|+|...+++-
T Consensus 301 ~nV~~i~--gD~~~~-~~~~~~~~~~FDvIvvn~~l~--~---~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 301 NNVEFSL--KKSFVD-NNRVAELIPQCDVILVNNFLF--D---EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CCEEEEE--SSCSTT-CHHHHHHGGGCSEEEECCTTC--C---HHHHHHHHHHHTTCCTTCEEEES
T ss_pred CceEEEE--cCcccc-ccccccccCCCCEEEEeCccc--c---ccHHHHHHHHHHhCCCCeEEEEe
Confidence 44432 122210 000000011235788875431 1 1233444 445889998877654
No 193
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=24.08 E-value=3.1e+02 Score=26.34 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=23.0
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCC
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSS 491 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~p 491 (706)
+.-.|+|+|.|.|. +...|+.+ + .++|||+..
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s 85 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDPS 85 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEESC
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeCC
Confidence 45689999999886 44556655 2 389999854
No 194
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=23.96 E-value=1.4e+02 Score=27.94 Aligned_cols=106 Identities=12% Similarity=0.032 Sum_probs=55.0
Q ss_pred eeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEeecccccc
Q 005237 452 RIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEILSLETLIS 529 (706)
Q Consensus 452 rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V~lesL~~ 529 (706)
.-+|+|+|.|.|.-- ..|+.+- |+..+||+|+.. +..++.+. +.++..|+. ++|..-...+..+
T Consensus 59 ~~~vLdiG~G~G~~~----~~la~~~--~~~~~v~~vD~~----~~~~~~a~----~~~~~~~~~~~v~~~~~d~~~~~~ 124 (223)
T 3duw_A 59 ARNILEIGTLGGYST----IWLARGL--SSGGRVVTLEAS----EKHADIAR----SNIERANLNDRVEVRTGLALDSLQ 124 (223)
T ss_dssp CSEEEEECCTTSHHH----HHHHTTC--CSSCEEEEEESC----HHHHHHHH----HHHHHTTCTTTEEEEESCHHHHHH
T ss_pred CCEEEEecCCccHHH----HHHHHhC--CCCCEEEEEECC----HHHHHHHH----HHHHHcCCCCcEEEEEcCHHHHHH
Confidence 357999999887532 2344332 234599999853 22344333 344556663 5665433211111
Q ss_pred cCCCCCCCCCCCceEEEecCcccccCCCCCHHHHHHH-HHhcCCcEEEEeec
Q 005237 530 ASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRF-VKQLQPKIVVSLDR 580 (706)
Q Consensus 530 ~~~~l~Lr~~~dEaLAVN~~~~~l~~~p~~~~~vL~~-IRsL~PkVVVlvEq 580 (706)
.. . .-....=++|.++... .....+|+. .+.|+|.-+++++.
T Consensus 125 ~~-~-~~~~~~fD~v~~d~~~-------~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 125 QI-E-NEKYEPFDFIFIDADK-------QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp HH-H-HTTCCCCSEEEECSCG-------GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred HH-H-hcCCCCcCEEEEcCCc-------HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 00 0 0000112466666431 123455655 47899999888864
No 195
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=23.87 E-value=3.6e+02 Score=26.96 Aligned_cols=42 Identities=12% Similarity=0.183 Sum_probs=28.3
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCC
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSS 491 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~p 491 (706)
..|++++.-.+.-+|+|+|.|.|.--..|.+ + + -++|||+..
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~----~-~----~~v~~vD~~ 59 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLE----K-A----KKVVACELD 59 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHH----H-S----SEEEEEESC
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHh----h-C----CEEEEEECC
Confidence 4555665544556899999999986555544 3 1 189999853
No 196
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=23.30 E-value=5.4e+02 Score=26.32 Aligned_cols=54 Identities=9% Similarity=0.048 Sum_probs=33.3
Q ss_pred HHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHH
Q 005237 441 QALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLK 507 (706)
Q Consensus 441 QAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~ 507 (706)
..|++++.-.+.-+|+|+|-|.|..-..| +.+. -++|+|+.. +.-+..+.+++.
T Consensus 40 ~~Iv~~l~~~~~~~VLEIG~G~G~lT~~L----a~~~-----~~V~aVEid----~~li~~a~~~~~ 93 (295)
T 3gru_A 40 NKAVESANLTKDDVVLEIGLGKGILTEEL----AKNA-----KKVYVIEID----KSLEPYANKLKE 93 (295)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHH----HHHS-----SEEEEEESC----GGGHHHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEEECCCchHHHHHH----HhcC-----CEEEEEECC----HHHHHHHHHHhc
Confidence 44666666555668999999998754444 4331 379999853 323444444443
No 197
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=22.22 E-value=50 Score=28.94 Aligned_cols=43 Identities=16% Similarity=0.245 Sum_probs=30.3
Q ss_pred CCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCcEEEE
Q 005237 478 EGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELE 520 (706)
Q Consensus 478 gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVpFEF~ 520 (706)
-|||.-|||.....-......|+++-+.+.+..+..|..|+|+
T Consensus 49 vgaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 49 IGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp SSTTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred EcCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 3677777777654210112347888899999999999999885
No 198
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=21.04 E-value=6.7e+02 Score=26.77 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=39.0
Q ss_pred HHHHHHHhhccCceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCC-cE
Q 005237 439 CNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINI-PF 517 (706)
Q Consensus 439 ANQAILEA~eG~~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgV-pF 517 (706)
+.+.+.+.+.-...-+|+|+|.+.|.-=..|.+.+ + ..-+||+++.. +..++ .+.+-++++|+ ..
T Consensus 247 ~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~---~---~~~~v~a~D~s----~~~l~----~~~~~~~~~g~~~v 312 (450)
T 2yxl_A 247 ASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELM---K---NKGKIYAFDVD----KMRMK----RLKDFVKRMGIKIV 312 (450)
T ss_dssp HHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHT---T---TCSEEEEECSC----HHHHH----HHHHHHHHTTCCSE
T ss_pred hhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHc---C---CCCEEEEEcCC----HHHHH----HHHHHHHHcCCCcE
Confidence 33445555554444589999999986444443332 1 13589999853 22344 34444566777 35
Q ss_pred EEE
Q 005237 518 ELE 520 (706)
Q Consensus 518 EF~ 520 (706)
+|.
T Consensus 313 ~~~ 315 (450)
T 2yxl_A 313 KPL 315 (450)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 199
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=20.55 E-value=1.9e+02 Score=27.67 Aligned_cols=57 Identities=14% Similarity=0.171 Sum_probs=35.6
Q ss_pred ceeEEEecccccccchHHHHHHHhcCCCCCCcEEEEEecCCCCCChhhHHHHHHHHHHHHHhcCCc--EEEEEe
Q 005237 451 NRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIP--FELEIL 522 (706)
Q Consensus 451 ~rVHIIDFgIg~G~QWpsLIQaLA~R~gGPPsLRITgI~~pss~~~~eL~~tg~rL~~fA~~lgVp--FEF~~V 522 (706)
+..+|+|+|.|.|.--..|.+... ..+||||+.. +..++.+.+++ +..|+. ++|..-
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-------~~~v~gvD~s----~~~~~~a~~~~----~~~~~~~~v~~~~~ 123 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-------GWYFLATEVD----DMCFNYAKKNV----EQNNLSDLIKVVKV 123 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-------CCEEEEEESC----HHHHHHHHHHH----HHTTCTTTEEEEEC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-------CCeEEEEECC----HHHHHHHHHHH----HHcCCCccEEEEEc
Confidence 456899999999976555555431 3689999853 33344444443 445664 666543
Done!