Your job contains 1 sequence.
>005240
MPFFTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSC
KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPL
GPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTPAVYTAV
EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV
REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLR
FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR
TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE
TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASL
QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF
SGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVAD
PSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQAERFFDALKGHGA
LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNTSDGKCGA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005240
(706 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q8EHB8 - symbol:SO_1310 "Serine peptidase S9 fa... 650 1.2e-79 3
TIGR_CMR|SO_1310 - symbol:SO_1310 "conserved hypothetical... 650 1.2e-79 3
TIGR_CMR|SO_4618 - symbol:SO_4618 "prolyl oligopeptidase ... 98 0.00075 3
>UNIPROTKB|Q8EHB8 [details] [associations]
symbol:SO_1310 "Serine peptidase S9 family" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001375
Pfam:PF00326 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0006508
GO:GO:0008236 EMBL:AE014299 GenomeReviews:AE014299_GR
RefSeq:NP_716930.1 ProteinModelPortal:Q8EHB8 DNASU:1169132
GeneID:1169132 KEGG:son:SO_1310 PATRIC:23522278
HOGENOM:HOG000295385 OMA:FPIQSER ProtClustDB:CLSK891098
Uniprot:Q8EHB8
Length = 801
Score = 650 (233.9 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 162/514 (31%), Positives = 252/514 (49%)
Query: 136 RMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTPAVYTAVEPSPDQKYVLITSMH 195
R +LLK D+ LF TT+QL L L+G G P + SPD +Y+L +
Sbjct: 210 RTYQDLLKTSADKQLFSRLTTSQLALVDLEGKLTKIGAPGIIEDFSVSPDGQYILSRQIT 269
Query: 196 RPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255
P+S +V F +++ +G+L+ L E P +SV G R W + +
Sbjct: 270 TPFSTQVKYDDFPTLTEIYNLNGQLITLLHQSQGGESRPQGKDSVLPGPRMFHWVQGQAA 329
Query: 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVN 315
TL + +A D+GD+ + RD ++ +P ++ + + R + W ++ LAL+
Sbjct: 330 TLAFTKALDQGDSQRDAPQRDSLWL--LDPPFTQQATRVAQTQWRITDIDWAENHLALIT 387
Query: 316 ETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 375
E K Q R + + + L +R + Y D G G + ++ +
Sbjct: 388 ERNSKAQQIRLSSLNTRLGESSLHTLNERNLRDKYQDLGL-FAKHYYPGKGQVVSLQ-QG 445
Query: 376 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 435
+ ++ G+G TP+G+ PFL + T +W+S + +V V +N
Sbjct: 446 AKTTGLIHYGQGATPQGDKPFLKRTSLITSESSLLWQSASNRL--ESVRYV-------LN 496
Query: 436 LNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPL 495
L+ L+++ ++ES TE +L+ K S + P +QK++I ++R DGVPL
Sbjct: 497 LDPLQLIINRESPTESPSLVLLN--AAKESVLYEQPDGLSAYLGMQKQLITFKRADGVPL 554
Query: 496 TATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR 555
+ TLYLP Y + + G LP L WAYP ++ + AGQ+ S N++ ++P + +A
Sbjct: 555 SGTLYLPANYTKEQ-GTLPVLMWAYPREFNDPEVAGQISFSANQYPTISPRGPIPLVAEG 613
Query: 556 FAVLAGPSIPIIGEGDKLPNDRFXXXXXXXXXXXXXXXXXXXXXDPSRIAVGGHSYGAFM 615
FAV S+PII +GDK ND F D +IAVGGHSYGAFM
Sbjct: 614 FAVFDKVSMPIIAQGDKESNDTFREQLTANAQAAIDTLVDLGIADRKQIAVGGHSYGAFM 673
Query: 616 TAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQAE 649
A+LLAH LF GIARSG+YN++LTPFGFQ E
Sbjct: 674 VANLLAHTD-LFYAGIARSGAYNRSLTPFGFQNE 706
Score = 284 (105.0 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 85/331 (25%), Positives = 144/331 (43%)
Query: 85 LNAVFG-SFVWVNNSTLLI-FTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLL 142
LN + W NN TLL F I ++ + V + PK + KN R +LL
Sbjct: 160 LNGTISLDYQWANNKTLLARFVI--AQDISASQPHVSISPKTKETSGKNSP-QRTYQDLL 216
Query: 143 KDEYDESLFDYYTTAQLVLGSLDGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKV 202
K D+ LF TT+QL L L+G G P + SPD +Y+L + P+S +V
Sbjct: 217 KTSADKQLFSRLTTSQLALVDLEGKLTKIGAPGIIEDFSVSPDGQYILSRQITTPFSTQV 276
Query: 203 PCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262
F +++ +G+L+ L E P +SV G R W + +TL + +A
Sbjct: 277 KYDDFPTLTEIYNLNGQLITLLHQSQGGESRPQGKDSVLPGPRMFHWVQGQAATLAFTKA 336
Query: 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS 322
D+GD+ + RD ++ +P ++ + + R + W ++ LAL+ E K
Sbjct: 337 LDQGDSQRDAPQRDSLWL--LDPPFTQQATRVAQTQWRITDIDWAENHLALITERNSKAQ 394
Query: 323 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 382
Q R + + + L +R + Y D G G + ++ + + ++
Sbjct: 395 QIRLSSLNTRLGESSLHTLNERNLRDKYQDLGL-FAKHYYPGKGQVVSLQ-QGAKTTGLI 452
Query: 383 LNGRGFTPEGNIPFLDLFDINTGSKERIWES 413
G+G TP+G+ PFL + T +W+S
Sbjct: 453 HYGQGATPQGDKPFLKRTSLITSESSLLWQS 483
Score = 131 (51.2 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 24/58 (41%), Positives = 40/58 (68%)
Query: 635 GSYNKTLTPFGFQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 692
G ++ F Q+ER FDA++G G +RLV+LPFE H Y A+E++ H+++E ++L+
Sbjct: 738 GEMDQNSGTFPLQSERLFDAIQGLGGKARLVILPFEGHSYTAKESLEHLLFEQSQFLK 795
Score = 51 (23.0 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 27/122 (22%), Positives = 58/122 (47%)
Query: 23 EVHGYPDGAKINFVSWSPDGKRI-AFSVRVDEEDNVSSCKLRVWIA-DAETGEAKPLFES 80
E+ PD +++VS +P+G + +++ D +S+ +L I+ D + K L +
Sbjct: 120 ELRFSPDSRNLSYVSLTPEGGYLFVYNIAKDRHQQLSNERLNGTISLDYQWANNKTLL-A 178
Query: 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140
+ + S V+ S T +S ++ P++T L ++++ K + SR+T +
Sbjct: 179 RFVIAQDISASQPHVSISPK---TKETSGKNSPQRTYQDL---LKTSADKQLF-SRLTTS 231
Query: 141 LL 142
L
Sbjct: 232 QL 233
>TIGR_CMR|SO_1310 [details] [associations]
symbol:SO_1310 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001375 Pfam:PF00326 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0006508 GO:GO:0008236 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_716930.1
ProteinModelPortal:Q8EHB8 DNASU:1169132 GeneID:1169132
KEGG:son:SO_1310 PATRIC:23522278 HOGENOM:HOG000295385 OMA:FPIQSER
ProtClustDB:CLSK891098 Uniprot:Q8EHB8
Length = 801
Score = 650 (233.9 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 162/514 (31%), Positives = 252/514 (49%)
Query: 136 RMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTPAVYTAVEPSPDQKYVLITSMH 195
R +LLK D+ LF TT+QL L L+G G P + SPD +Y+L +
Sbjct: 210 RTYQDLLKTSADKQLFSRLTTSQLALVDLEGKLTKIGAPGIIEDFSVSPDGQYILSRQIT 269
Query: 196 RPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255
P+S +V F +++ +G+L+ L E P +SV G R W + +
Sbjct: 270 TPFSTQVKYDDFPTLTEIYNLNGQLITLLHQSQGGESRPQGKDSVLPGPRMFHWVQGQAA 329
Query: 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVN 315
TL + +A D+GD+ + RD ++ +P ++ + + R + W ++ LAL+
Sbjct: 330 TLAFTKALDQGDSQRDAPQRDSLWL--LDPPFTQQATRVAQTQWRITDIDWAENHLALIT 387
Query: 316 ETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 375
E K Q R + + + L +R + Y D G G + ++ +
Sbjct: 388 ERNSKAQQIRLSSLNTRLGESSLHTLNERNLRDKYQDLGL-FAKHYYPGKGQVVSLQ-QG 445
Query: 376 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN 435
+ ++ G+G TP+G+ PFL + T +W+S + +V V +N
Sbjct: 446 AKTTGLIHYGQGATPQGDKPFLKRTSLITSESSLLWQSASNRL--ESVRYV-------LN 496
Query: 436 LNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPL 495
L+ L+++ ++ES TE +L+ K S + P +QK++I ++R DGVPL
Sbjct: 497 LDPLQLIINRESPTESPSLVLLN--AAKESVLYEQPDGLSAYLGMQKQLITFKRADGVPL 554
Query: 496 TATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR 555
+ TLYLP Y + + G LP L WAYP ++ + AGQ+ S N++ ++P + +A
Sbjct: 555 SGTLYLPANYTKEQ-GTLPVLMWAYPREFNDPEVAGQISFSANQYPTISPRGPIPLVAEG 613
Query: 556 FAVLAGPSIPIIGEGDKLPNDRFXXXXXXXXXXXXXXXXXXXXXDPSRIAVGGHSYGAFM 615
FAV S+PII +GDK ND F D +IAVGGHSYGAFM
Sbjct: 614 FAVFDKVSMPIIAQGDKESNDTFREQLTANAQAAIDTLVDLGIADRKQIAVGGHSYGAFM 673
Query: 616 TAHLLAHAPHLFCCGIARSGSYNKTLTPFGFQAE 649
A+LLAH LF GIARSG+YN++LTPFGFQ E
Sbjct: 674 VANLLAHTD-LFYAGIARSGAYNRSLTPFGFQNE 706
Score = 284 (105.0 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 85/331 (25%), Positives = 144/331 (43%)
Query: 85 LNAVFG-SFVWVNNSTLLI-FTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLL 142
LN + W NN TLL F I ++ + V + PK + KN R +LL
Sbjct: 160 LNGTISLDYQWANNKTLLARFVI--AQDISASQPHVSISPKTKETSGKNSP-QRTYQDLL 216
Query: 143 KDEYDESLFDYYTTAQLVLGSLDGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKV 202
K D+ LF TT+QL L L+G G P + SPD +Y+L + P+S +V
Sbjct: 217 KTSADKQLFSRLTTSQLALVDLEGKLTKIGAPGIIEDFSVSPDGQYILSRQITTPFSTQV 276
Query: 203 PCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262
F +++ +G+L+ L E P +SV G R W + +TL + +A
Sbjct: 277 KYDDFPTLTEIYNLNGQLITLLHQSQGGESRPQGKDSVLPGPRMFHWVQGQAATLAFTKA 336
Query: 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS 322
D+GD+ + RD ++ +P ++ + + R + W ++ LAL+ E K
Sbjct: 337 LDQGDSQRDAPQRDSLWL--LDPPFTQQATRVAQTQWRITDIDWAENHLALITERNSKAQ 394
Query: 323 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYIL 382
Q R + + + L +R + Y D G G + ++ + + ++
Sbjct: 395 QIRLSSLNTRLGESSLHTLNERNLRDKYQDLGL-FAKHYYPGKGQVVSLQ-QGAKTTGLI 452
Query: 383 LNGRGFTPEGNIPFLDLFDINTGSKERIWES 413
G+G TP+G+ PFL + T +W+S
Sbjct: 453 HYGQGATPQGDKPFLKRTSLITSESSLLWQS 483
Score = 131 (51.2 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 24/58 (41%), Positives = 40/58 (68%)
Query: 635 GSYNKTLTPFGFQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 692
G ++ F Q+ER FDA++G G +RLV+LPFE H Y A+E++ H+++E ++L+
Sbjct: 738 GEMDQNSGTFPLQSERLFDAIQGLGGKARLVILPFEGHSYTAKESLEHLLFEQSQFLK 795
Score = 51 (23.0 bits), Expect = 1.2e-79, Sum P(3) = 1.2e-79
Identities = 27/122 (22%), Positives = 58/122 (47%)
Query: 23 EVHGYPDGAKINFVSWSPDGKRI-AFSVRVDEEDNVSSCKLRVWIA-DAETGEAKPLFES 80
E+ PD +++VS +P+G + +++ D +S+ +L I+ D + K L +
Sbjct: 120 ELRFSPDSRNLSYVSLTPEGGYLFVYNIAKDRHQQLSNERLNGTISLDYQWANNKTLL-A 178
Query: 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140
+ + S V+ S T +S ++ P++T L ++++ K + SR+T +
Sbjct: 179 RFVIAQDISASQPHVSISPK---TKETSGKNSPQRTYQDL---LKTSADKQLF-SRLTTS 231
Query: 141 LL 142
L
Sbjct: 232 QL 233
>TIGR_CMR|SO_4618 [details] [associations]
symbol:SO_4618 "prolyl oligopeptidase family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR001375 Pfam:PF00326
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0006508 GO:GO:0008236
EMBL:AE014299 GenomeReviews:AE014299_GR MEROPS:S09.A77
RefSeq:NP_720134.1 ProteinModelPortal:Q8E8P3 GeneID:1172201
KEGG:son:SO_4618 PATRIC:23528899 HOGENOM:HOG000245065 OMA:ERRYIVY
ProtClustDB:CLSK907735 Uniprot:Q8E8P3
Length = 645
Score = 98 (39.6 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 39/160 (24%), Positives = 70/160 (43%)
Query: 20 PEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79
P+ V + ++ V SPDGK+IA VRV++ + V I D ETG
Sbjct: 22 PQLPVEAFASIPDVSSVQLSPDGKKIASIVRVEQPKLKGTV---VSILDLETGTKDVAIH 78
Query: 80 SPDICLNAVFGSFVWVNNSTLLIFT-IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138
+ + V S W N++TLLI P++R P + + + + +++ +
Sbjct: 79 TDN--QKFVMLSLTWANDTTLLIKAEFPANRDGTPTTETRLVKYDLTTRKTSSVLAPSVI 136
Query: 139 DNLLK-DEYDESLFDYYTT-AQLVLGSLDGTAKDFGTPAV 176
+ L ++ + D ++ +L SLDG + G +V
Sbjct: 137 ERLSWIPQHQGQIIDLMPDDSEHILLSLDGMGQKAGEDSV 176
Score = 66 (28.3 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 600 DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635
DP RI + G SYG + A P L+ C ++ +G
Sbjct: 496 DPQRICIVGASYGGYAALMGAAMTPDLYRCAVSVAG 531
Score = 47 (21.6 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAY--PEDYKSKD 528
+ + Y+ +D + + A L +P G+ ++K LP + + + P Y S D
Sbjct: 392 QYLSYEARDKLKIDAYLTVPKGF-KAKH--LPTIIFPHGGPISYDSND 436
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 706 685 0.00080 121 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 625 (66 KB)
Total size of DFA: 406 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.70u 0.11s 58.81t Elapsed: 00:00:03
Total cpu time: 58.70u 0.11s 58.81t Elapsed: 00:00:03
Start: Tue May 21 03:38:52 2013 End: Tue May 21 03:38:55 2013