Query 005240
Match_columns 706
No_of_seqs 296 out of 3364
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 19:36:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 8E-51 2.7E-55 470.5 52.7 567 6-699 37-729 (740)
2 2ecf_A Dipeptidyl peptidase IV 100.0 1.3E-47 4.6E-52 444.8 50.6 548 5-696 64-740 (741)
3 2z3z_A Dipeptidyl aminopeptida 100.0 7.5E-47 2.6E-51 436.0 52.8 524 32-695 83-706 (706)
4 1xfd_A DIP, dipeptidyl aminope 100.0 3.2E-47 1.1E-51 440.3 45.5 568 6-696 38-722 (723)
5 3azo_A Aminopeptidase; POP fam 100.0 1.7E-45 5.8E-50 421.5 57.2 537 32-699 25-652 (662)
6 1z68_A Fibroblast activation p 100.0 3.3E-46 1.1E-50 431.5 47.0 562 5-696 36-719 (719)
7 3o4h_A Acylamino-acid-releasin 100.0 1.8E-46 6.2E-51 422.7 42.0 503 32-697 23-581 (582)
8 2bkl_A Prolyl endopeptidase; m 100.0 1.7E-44 5.8E-49 414.5 53.8 539 37-701 74-681 (695)
9 2xdw_A Prolyl endopeptidase; a 100.0 7.1E-44 2.4E-48 410.6 51.4 541 33-697 76-706 (710)
10 1yr2_A Prolyl oligopeptidase; 100.0 8.1E-43 2.8E-47 403.3 49.3 537 37-700 113-722 (741)
11 3iuj_A Prolyl endopeptidase; h 100.0 1.9E-42 6.5E-47 396.5 51.1 536 37-700 83-689 (693)
12 2xe4_A Oligopeptidase B; hydro 100.0 9.7E-41 3.3E-45 384.3 47.4 528 33-699 119-745 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 1.1E-31 3.9E-36 301.4 47.5 250 433-698 402-709 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 1E-24 3.5E-29 231.8 29.7 344 18-463 20-386 (388)
15 3c5m_A Oligogalacturonate lyas 99.9 3.2E-22 1.1E-26 212.9 27.4 326 33-468 38-391 (396)
16 4a5s_A Dipeptidyl peptidase 4 99.9 3.5E-22 1.2E-26 230.7 28.8 334 33-468 19-408 (740)
17 1k32_A Tricorn protease; prote 99.9 1.1E-21 3.8E-26 235.2 31.2 369 6-469 34-469 (1045)
18 2ecf_A Dipeptidyl peptidase IV 99.9 4.8E-21 1.6E-25 221.7 34.5 330 31-469 37-423 (741)
19 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.6E-21 8.8E-26 207.4 27.3 255 40-414 141-397 (415)
20 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.9E-21 1.7E-25 205.2 26.4 233 5-341 159-393 (415)
21 1xfd_A DIP, dipeptidyl aminope 99.9 1.1E-20 3.7E-25 218.1 26.9 338 32-468 18-403 (723)
22 3pe7_A Oligogalacturonate lyas 99.9 2.4E-20 8.2E-25 197.9 27.1 310 61-472 10-340 (388)
23 2gop_A Trilobed protease; beta 99.9 8.3E-20 2.8E-24 190.7 27.6 309 29-474 13-343 (347)
24 2ojh_A Uncharacterized protein 99.9 3.2E-19 1.1E-23 180.8 28.8 262 4-372 21-291 (297)
25 1z68_A Fibroblast activation p 99.8 6.3E-20 2.2E-24 211.5 22.5 331 33-468 18-402 (719)
26 2z3z_A Dipeptidyl aminopeptida 99.8 2.6E-18 8.7E-23 197.6 31.0 312 5-406 101-437 (706)
27 3c5m_A Oligogalacturonate lyas 99.8 3E-18 1E-22 182.0 25.6 293 63-471 12-339 (396)
28 1k32_A Tricorn protease; prote 99.8 1.3E-17 4.6E-22 199.8 33.8 238 19-372 236-491 (1045)
29 3ebl_A Gibberellin receptor GI 99.8 1.4E-18 4.8E-23 182.1 21.9 203 478-700 60-356 (365)
30 2ojh_A Uncharacterized protein 99.8 1.7E-17 5.8E-22 168.0 26.7 271 59-449 19-294 (297)
31 3azo_A Aminopeptidase; POP fam 99.8 2E-17 6.8E-22 188.7 27.0 286 18-414 57-379 (662)
32 1l0q_A Surface layer protein; 99.8 6.2E-16 2.1E-20 164.0 35.8 357 5-503 12-385 (391)
33 3f67_A Putative dienelactone h 99.8 7.4E-18 2.5E-22 165.8 18.9 194 479-694 3-241 (241)
34 4ao6_A Esterase; hydrolase, th 99.8 2.9E-17 1E-21 163.6 21.2 208 461-696 10-259 (259)
35 3ga7_A Acetyl esterase; phosph 99.8 1.8E-17 6.2E-22 171.4 20.1 191 480-697 61-324 (326)
36 3doh_A Esterase; alpha-beta hy 99.8 1.8E-17 6.3E-22 175.1 20.1 209 481-694 143-378 (380)
37 3fak_A Esterase/lipase, ESTE5; 99.8 6.9E-18 2.3E-22 174.0 16.0 180 494-699 66-312 (322)
38 2xdw_A Prolyl endopeptidase; a 99.7 7.6E-16 2.6E-20 176.9 32.1 298 5-410 98-422 (710)
39 3hxk_A Sugar hydrolase; alpha- 99.7 3.8E-17 1.3E-21 164.6 18.4 198 486-701 18-272 (276)
40 3vgz_A Uncharacterized protein 99.7 2.1E-15 7.2E-20 157.2 32.4 279 29-447 39-334 (353)
41 2o2g_A Dienelactone hydrolase; 99.7 7E-17 2.4E-21 156.6 19.6 194 479-696 9-223 (223)
42 2gop_A Trilobed protease; beta 99.7 2.9E-16 9.8E-21 163.7 25.2 244 4-330 42-290 (347)
43 1jjf_A Xylanase Z, endo-1,4-be 99.7 2.2E-16 7.5E-21 158.3 22.9 201 479-697 29-263 (268)
44 3o4h_A Acylamino-acid-releasin 99.7 7.5E-17 2.6E-21 180.9 20.4 219 6-329 45-274 (582)
45 3qh4_A Esterase LIPW; structur 99.7 3E-17 1E-21 168.8 15.7 193 478-696 56-316 (317)
46 3k2i_A Acyl-coenzyme A thioest 99.7 1.2E-16 4.2E-21 171.3 18.9 178 494-699 144-415 (422)
47 3s25_A Hypothetical 7-bladed b 99.7 1.7E-15 5.7E-20 153.0 25.5 280 36-468 19-300 (302)
48 2jbw_A Dhpon-hydrolase, 2,6-di 99.7 2.3E-16 7.9E-21 167.2 20.1 188 480-698 125-367 (386)
49 3hlk_A Acyl-coenzyme A thioest 99.7 1.2E-16 4.2E-21 172.1 17.7 177 494-698 160-430 (446)
50 2i3d_A AGR_C_3351P, hypothetic 99.7 1.3E-15 4.5E-20 150.7 23.7 196 481-700 20-238 (249)
51 3fcx_A FGH, esterase D, S-form 99.7 5.4E-17 1.8E-21 163.9 13.7 198 481-696 15-281 (282)
52 3iuj_A Prolyl endopeptidase; h 99.7 2.2E-15 7.4E-20 172.2 28.2 272 32-413 130-414 (693)
53 3hfq_A Uncharacterized protein 99.7 1.9E-15 6.4E-20 157.6 25.3 284 6-410 17-325 (347)
54 2bkl_A Prolyl endopeptidase; m 99.7 4.2E-15 1.4E-19 170.2 29.1 295 5-412 94-405 (695)
55 3ain_A 303AA long hypothetical 99.7 1.2E-15 4.2E-20 157.0 22.0 194 478-697 61-322 (323)
56 2o7r_A CXE carboxylesterase; a 99.7 1.7E-16 5.8E-21 165.0 15.6 236 439-697 8-333 (338)
57 2hm7_A Carboxylesterase; alpha 99.7 3.6E-16 1.2E-20 160.3 17.7 194 478-696 44-310 (310)
58 3bxp_A Putative lipase/esteras 99.7 7.4E-16 2.5E-20 155.1 19.1 195 480-695 2-271 (277)
59 3u4y_A Uncharacterized protein 99.7 3.4E-14 1.2E-18 146.8 31.4 299 35-467 2-310 (331)
60 3ls2_A S-formylglutathione hyd 99.7 2.6E-16 8.9E-21 158.8 15.0 195 481-696 14-279 (280)
61 3u4y_A Uncharacterized protein 99.7 3.4E-14 1.2E-18 146.8 31.3 259 5-371 20-291 (331)
62 1yr2_A Prolyl oligopeptidase; 99.7 6.6E-15 2.2E-19 169.8 28.6 298 5-411 133-448 (741)
63 3i6y_A Esterase APC40077; lipa 99.7 3.7E-16 1.3E-20 157.7 16.0 195 481-696 16-279 (280)
64 1lzl_A Heroin esterase; alpha/ 99.7 6.7E-16 2.3E-20 159.4 17.5 196 478-697 47-318 (323)
65 3e4d_A Esterase D; S-formylglu 99.7 5.7E-16 1.9E-20 156.1 16.6 195 481-696 14-278 (278)
66 3ksr_A Putative serine hydrola 99.7 1E-15 3.5E-20 155.1 18.6 188 480-697 4-243 (290)
67 3scy_A Hypothetical bacterial 99.7 2E-14 6.9E-19 150.7 28.9 283 5-410 27-345 (361)
68 2ymu_A WD-40 repeat protein; u 99.7 1.7E-14 5.9E-19 161.3 29.9 241 6-371 285-527 (577)
69 1vlq_A Acetyl xylan esterase; 99.7 3.7E-15 1.3E-19 154.7 22.5 195 478-697 64-336 (337)
70 2uz0_A Esterase, tributyrin es 99.7 5.4E-16 1.9E-20 154.7 15.6 200 480-698 5-259 (263)
71 2wir_A Pesta, alpha/beta hydro 99.7 4.5E-16 1.5E-20 159.9 15.3 192 479-696 48-312 (313)
72 1gkl_A Endo-1,4-beta-xylanase 99.7 1.9E-15 6.5E-20 153.4 19.7 177 480-675 39-273 (297)
73 2c7b_A Carboxylesterase, ESTE1 99.7 2E-15 6.8E-20 154.9 19.9 192 479-696 45-309 (311)
74 1l0q_A Surface layer protein; 99.7 4.2E-14 1.4E-18 149.8 30.5 271 59-467 9-281 (391)
75 3k6k_A Esterase/lipase; alpha/ 99.7 8.8E-16 3E-20 158.3 16.7 189 479-699 57-312 (322)
76 2zsh_A Probable gibberellin re 99.7 3.7E-15 1.3E-19 155.7 21.5 196 478-693 68-350 (351)
77 1zi8_A Carboxymethylenebutenol 99.7 2.9E-16 9.8E-21 153.8 12.2 190 483-697 4-234 (236)
78 3bws_A Protein LP49; two-domai 99.7 4.8E-14 1.6E-18 151.6 30.4 316 19-460 111-431 (433)
79 3fcy_A Xylan esterase 1; alpha 99.7 4.5E-15 1.5E-19 154.7 21.5 188 478-693 78-343 (346)
80 4b6g_A Putative esterase; hydr 99.7 4.8E-16 1.6E-20 157.2 12.8 194 481-696 21-283 (283)
81 2fuk_A XC6422 protein; A/B hyd 99.6 8.5E-15 2.9E-19 141.6 20.9 194 480-697 8-218 (220)
82 1jkm_A Brefeldin A esterase; s 99.6 3.1E-15 1.1E-19 156.7 19.1 197 479-695 79-358 (361)
83 3trd_A Alpha/beta hydrolase; c 99.6 7.1E-15 2.4E-19 140.9 19.1 186 481-691 5-207 (208)
84 1l7a_A Cephalosporin C deacety 99.6 1.6E-14 5.5E-19 148.2 23.0 193 478-696 52-317 (318)
85 1gxr_A ESG1, transducin-like e 99.6 2E-13 6.7E-18 140.9 31.0 281 28-459 49-335 (337)
86 4g56_B MGC81050 protein; prote 99.6 5.1E-14 1.7E-18 147.3 26.5 289 32-461 44-343 (357)
87 2ymu_A WD-40 repeat protein; u 99.6 1.6E-13 5.6E-18 153.4 32.1 274 32-461 264-539 (577)
88 3s25_A Hypothetical 7-bladed b 99.6 6.3E-14 2.2E-18 141.5 25.7 238 6-371 38-280 (302)
89 3zwl_B Eukaryotic translation 99.6 1.2E-13 4.1E-18 144.4 28.8 309 32-462 34-347 (369)
90 1ri6_A Putative isomerase YBHE 99.6 1E-13 3.5E-18 143.6 27.5 286 5-411 15-317 (343)
91 1nr0_A Actin interacting prote 99.6 7.4E-14 2.5E-18 157.4 28.4 231 32-371 20-258 (611)
92 3bjr_A Putative carboxylestera 99.6 1.2E-15 4E-20 154.3 11.5 198 478-694 15-282 (283)
93 1pby_B Quinohemoprotein amine 99.6 2.7E-13 9.3E-18 139.9 29.7 291 4-413 10-319 (337)
94 1pby_B Quinohemoprotein amine 99.6 3.5E-13 1.2E-17 139.1 30.3 279 60-468 9-317 (337)
95 2hdw_A Hypothetical protein PA 99.6 1.9E-14 6.5E-19 151.1 20.7 138 478-636 64-204 (367)
96 2b9v_A Alpha-amino acid ester 99.6 1.4E-14 4.8E-19 162.5 20.3 150 480-639 35-194 (652)
97 3ow8_A WD repeat-containing pr 99.6 4.7E-13 1.6E-17 137.7 29.7 277 32-459 34-319 (321)
98 1mpx_A Alpha-amino acid ester 99.6 1.4E-14 4.9E-19 161.9 18.8 146 480-638 23-180 (615)
99 3hfq_A Uncharacterized protein 99.6 5.1E-13 1.7E-17 139.0 27.7 300 59-469 15-327 (347)
100 3h04_A Uncharacterized protein 99.6 2.3E-13 7.8E-18 135.9 23.8 186 482-696 3-274 (275)
101 3ei3_B DNA damage-binding prot 99.6 3.5E-12 1.2E-16 134.6 34.0 297 31-461 74-382 (383)
102 1nir_A Nitrite reductase; hemo 99.6 2.2E-12 7.5E-17 142.4 33.6 331 5-468 159-521 (543)
103 1r5m_A SIR4-interacting protei 99.6 9.5E-13 3.2E-17 140.5 29.9 240 31-371 46-349 (425)
104 1auo_A Carboxylesterase; hydro 99.6 2.1E-13 7.2E-18 131.5 22.4 163 512-696 13-218 (218)
105 1jji_A Carboxylesterase; alpha 99.6 8.8E-15 3E-19 150.0 13.2 185 481-693 55-310 (311)
106 2wtm_A EST1E; hydrolase; 1.60A 99.6 9.6E-14 3.3E-18 137.4 19.9 187 485-696 4-250 (251)
107 3hju_A Monoglyceride lipase; a 99.6 1.5E-13 5.1E-18 142.7 22.0 133 480-638 32-168 (342)
108 3vis_A Esterase; alpha/beta-hy 99.6 3.6E-14 1.2E-18 145.0 16.8 176 490-698 79-278 (306)
109 3d7r_A Esterase; alpha/beta fo 99.6 1.8E-14 6E-19 148.8 14.5 174 495-696 84-323 (326)
110 2xe4_A Oligopeptidase B; hydro 99.6 3.9E-13 1.3E-17 154.5 27.2 207 32-331 175-398 (751)
111 1jfr_A Lipase; serine hydrolas 99.6 1.4E-13 4.9E-18 137.1 20.7 188 480-698 23-234 (262)
112 4h0c_A Phospholipase/carboxyle 99.6 1.8E-14 6.2E-19 138.0 13.3 159 513-692 22-209 (210)
113 4fhz_A Phospholipase/carboxyle 99.6 6E-14 2E-18 140.6 17.7 184 492-699 49-270 (285)
114 4gqb_B Methylosome protein 50; 99.6 1.4E-12 4.9E-17 135.4 28.2 219 157-462 103-332 (344)
115 3bws_A Protein LP49; two-domai 99.6 1.7E-12 6E-17 139.3 29.6 302 33-468 63-397 (433)
116 1gxr_A ESG1, transducin-like e 99.5 3.5E-12 1.2E-16 131.4 30.3 251 5-371 72-325 (337)
117 3vgz_A Uncharacterized protein 99.5 2.7E-12 9.1E-17 133.5 28.9 256 6-372 70-333 (353)
118 3d0k_A Putative poly(3-hydroxy 99.5 8.3E-14 2.9E-18 142.2 16.6 190 482-695 24-288 (304)
119 4e54_B DNA damage-binding prot 99.5 8.5E-13 2.9E-17 142.1 25.4 303 31-465 120-434 (435)
120 3ow8_A WD repeat-containing pr 99.5 3.3E-12 1.1E-16 131.4 28.5 244 6-371 59-309 (321)
121 2qm0_A BES; alpha-beta structu 99.5 1.6E-14 5.3E-19 145.2 10.6 195 478-691 14-272 (275)
122 2pm9_A Protein WEB1, protein t 99.5 8E-13 2.7E-17 141.0 24.3 299 32-463 14-339 (416)
123 3og9_A Protein YAHD A copper i 99.5 2.8E-13 9.5E-18 129.9 18.7 159 513-694 17-208 (209)
124 3u0v_A Lysophospholipase-like 99.5 2.9E-13 1E-17 132.6 19.1 115 578-698 95-234 (239)
125 1sfr_A Antigen 85-A; alpha/bet 99.5 3.1E-13 1.1E-17 137.8 19.9 196 480-698 7-286 (304)
126 1fj2_A Protein (acyl protein t 99.5 1E-13 3.5E-18 135.1 15.7 173 499-697 14-230 (232)
127 3nuz_A Putative acetyl xylan e 99.5 4.7E-14 1.6E-18 149.5 14.2 150 478-636 88-263 (398)
128 1nr0_A Actin interacting prote 99.5 6.6E-12 2.3E-16 141.4 32.5 218 5-333 39-270 (611)
129 1ri6_A Putative isomerase YBHE 99.5 4.9E-12 1.7E-16 130.8 29.1 224 175-470 84-319 (343)
130 3pfb_A Cinnamoyl esterase; alp 99.5 2.9E-13 1E-17 135.1 19.0 188 481-694 21-267 (270)
131 4h5i_A Guanine nucleotide-exch 99.5 5.9E-12 2E-16 132.0 29.7 203 176-461 135-343 (365)
132 3fm0_A Protein CIAO1; WDR39,SG 99.5 4.1E-12 1.4E-16 132.1 28.0 197 32-332 18-226 (345)
133 4e15_A Kynurenine formamidase; 99.5 3.8E-14 1.3E-18 144.7 12.1 166 481-673 57-280 (303)
134 2pm9_A Protein WEB1, protein t 99.5 1.6E-12 5.5E-17 138.6 25.3 255 6-370 46-324 (416)
135 3c8d_A Enterochelin esterase; 99.5 5.5E-14 1.9E-18 148.7 13.5 192 480-695 166-398 (403)
136 2xzm_R RACK1; ribosome, transl 99.5 7.4E-12 2.5E-16 130.0 29.6 226 32-371 23-274 (343)
137 1got_B GT-beta; complex (GTP-b 99.5 7.3E-12 2.5E-16 129.9 29.4 275 32-458 57-340 (340)
138 3d59_A Platelet-activating fac 99.5 9.2E-14 3.2E-18 146.8 13.6 171 512-698 97-353 (383)
139 4fbl_A LIPS lipolytic enzyme; 99.5 2.2E-13 7.4E-18 137.4 15.6 140 546-694 69-281 (281)
140 3frx_A Guanine nucleotide-bind 99.5 1.3E-11 4.3E-16 126.9 29.1 225 32-371 19-256 (319)
141 3scy_A Hypothetical bacterial 99.5 6.4E-12 2.2E-16 131.5 27.3 300 59-468 26-346 (361)
142 1erj_A Transcriptional repress 99.5 1E-11 3.5E-16 131.6 29.2 196 32-333 66-287 (393)
143 3mkq_A Coatomer beta'-subunit; 99.5 6.8E-12 2.3E-16 146.3 30.4 222 32-371 15-247 (814)
144 3pe6_A Monoglyceride lipase; a 99.5 7.5E-13 2.6E-17 134.1 19.4 127 486-638 21-150 (303)
145 3iz6_a 40S ribosomal protein R 99.5 2.4E-11 8.1E-16 128.2 31.5 297 32-463 68-377 (380)
146 3vl1_A 26S proteasome regulato 99.5 1.7E-11 5.9E-16 130.9 30.6 226 6-334 79-323 (420)
147 4ery_A WD repeat-containing pr 99.5 5.6E-11 1.9E-15 121.4 33.2 278 32-458 25-309 (312)
148 2pbi_B Guanine nucleotide-bind 99.5 2.7E-11 9.3E-16 126.4 30.9 268 32-446 66-346 (354)
149 3g8y_A SUSD/RAGB-associated es 99.5 2.4E-13 8.2E-18 143.8 15.2 152 478-638 83-260 (391)
150 2h1i_A Carboxylesterase; struc 99.5 1.3E-12 4.3E-17 126.9 18.9 161 512-695 37-226 (226)
151 1vyh_C Platelet-activating fac 99.5 1.8E-11 6.2E-16 130.5 29.6 275 32-459 110-409 (410)
152 3vl1_A 26S proteasome regulato 99.5 5.2E-12 1.8E-16 134.9 25.0 221 33-370 59-309 (420)
153 3iii_A COCE/NOND family hydrol 99.5 2.1E-13 7.3E-18 149.1 14.1 152 479-638 38-197 (560)
154 3cn9_A Carboxylesterase; alpha 99.5 1.9E-12 6.3E-17 125.8 19.3 162 512-695 23-226 (226)
155 2gzs_A IROE protein; enterobac 99.5 7.1E-14 2.4E-18 140.3 9.3 193 479-693 10-264 (278)
156 4aez_A CDC20, WD repeat-contai 99.5 3.2E-11 1.1E-15 128.2 30.4 249 5-371 113-368 (401)
157 1jof_A Carboxy-CIS,CIS-muconat 99.5 9.2E-12 3.1E-16 130.6 25.8 275 6-371 15-328 (365)
158 4aow_A Guanine nucleotide-bind 99.5 3.3E-11 1.1E-15 124.4 29.7 289 32-463 40-339 (340)
159 2ynn_A Coatomer subunit beta'; 99.5 7E-11 2.4E-15 120.4 31.5 268 32-446 15-291 (304)
160 1r88_A MPT51/MPB51 antigen; AL 99.5 3.6E-12 1.2E-16 128.1 21.0 193 479-696 8-274 (280)
161 1lns_A X-prolyl dipeptidyl ami 99.5 2.7E-14 9.2E-19 162.6 5.9 89 546-637 272-375 (763)
162 3i2n_A WD repeat-containing pr 99.5 1E-11 3.4E-16 129.2 24.5 234 32-371 20-278 (357)
163 1jmx_B Amine dehydrogenase; ox 99.4 1.9E-11 6.6E-16 126.7 26.0 292 34-466 3-330 (349)
164 3b5e_A MLL8374 protein; NP_108 99.4 2.3E-12 7.7E-17 124.9 17.7 176 491-695 14-217 (223)
165 1ufo_A Hypothetical protein TT 99.4 2.9E-12 9.9E-17 124.9 18.4 176 487-697 7-237 (238)
166 1k8k_C P40, ARP2/3 complex 41 99.4 1.1E-11 3.9E-16 129.7 24.0 225 32-370 10-262 (372)
167 4h5i_A Guanine nucleotide-exch 99.4 6.3E-12 2.2E-16 131.8 21.8 198 33-330 136-342 (365)
168 3mve_A FRSA, UPF0255 protein V 99.4 4.2E-13 1.4E-17 142.8 13.0 188 480-696 166-414 (415)
169 3sfz_A APAF-1, apoptotic pepti 99.4 1.5E-10 5.3E-15 141.5 36.9 256 5-371 637-901 (1249)
170 3zwl_B Eukaryotic translation 99.4 1.3E-10 4.4E-15 121.2 31.0 252 6-371 55-334 (369)
171 3bdi_A Uncharacterized protein 99.4 1E-11 3.5E-16 118.4 20.6 181 482-693 4-206 (207)
172 3dw8_B Serine/threonine-protei 99.4 1.1E-10 3.9E-15 125.5 31.1 158 175-371 178-361 (447)
173 4ezi_A Uncharacterized protein 99.4 3.4E-12 1.2E-16 132.9 18.3 149 479-638 40-202 (377)
174 4aez_A CDC20, WD repeat-contai 99.4 1.2E-10 4.1E-15 123.7 30.8 265 62-464 113-383 (401)
175 3sfz_A APAF-1, apoptotic pepti 99.4 2E-11 6.9E-16 149.4 28.2 224 157-464 983-1210(1249)
176 2vdu_B TRNA (guanine-N(7)-)-me 99.4 9.2E-11 3.1E-15 126.7 30.3 230 157-468 125-399 (450)
177 3fnb_A Acylaminoacyl peptidase 99.4 3.9E-13 1.3E-17 143.1 11.2 188 481-697 134-403 (405)
178 2pbl_A Putative esterase/lipas 99.4 2.4E-12 8.2E-17 128.1 16.1 125 486-639 42-172 (262)
179 3dm0_A Maltose-binding peripla 99.4 5.3E-11 1.8E-15 136.2 29.3 228 32-371 384-621 (694)
180 1vkh_A Putative serine hydrola 99.4 9.8E-13 3.4E-17 131.9 13.1 158 512-691 40-272 (273)
181 3llc_A Putative hydrolase; str 99.4 5.1E-12 1.8E-16 125.7 18.1 130 481-638 10-148 (270)
182 3mkq_A Coatomer beta'-subunit; 99.4 3.7E-11 1.3E-15 140.1 28.1 239 6-367 36-285 (814)
183 2qru_A Uncharacterized protein 99.4 1.2E-11 4E-16 124.1 20.6 121 490-638 12-135 (274)
184 1k8q_A Triacylglycerol lipase, 99.4 1.2E-11 4.2E-16 129.8 21.1 144 480-637 25-183 (377)
185 1sq9_A Antiviral protein SKI8; 99.4 1E-10 3.5E-15 123.7 28.3 302 32-463 18-397 (397)
186 2j04_A TAU60, YPL007P, hypothe 99.4 5.2E-12 1.8E-16 135.5 17.7 191 30-330 85-296 (588)
187 4a11_B DNA excision repair pro 99.4 1.2E-10 4.2E-15 123.3 28.1 309 7-464 25-368 (408)
188 4fol_A FGH, S-formylglutathion 99.4 5.1E-12 1.7E-16 127.1 15.7 202 480-696 12-297 (299)
189 4gqb_B Methylosome protein 50; 99.4 3.4E-11 1.2E-15 125.0 22.5 229 32-371 84-318 (344)
190 3dkr_A Esterase D; alpha beta 99.4 7.8E-12 2.7E-16 122.8 16.2 159 513-694 22-248 (251)
191 2aq5_A Coronin-1A; WD40 repeat 99.4 1.1E-10 3.9E-15 123.9 26.4 294 34-468 38-349 (402)
192 1pgu_A Actin interacting prote 99.4 1.1E-10 3.9E-15 131.1 27.8 285 32-464 20-331 (615)
193 1yfq_A Cell cycle arrest prote 99.4 1.6E-10 5.4E-15 119.4 25.6 229 32-371 13-270 (342)
194 1jmx_B Amine dehydrogenase; ox 99.3 9.5E-11 3.2E-15 121.4 23.6 298 4-411 20-332 (349)
195 3frx_A Guanine nucleotide-bind 99.3 1.9E-10 6.7E-15 117.9 25.6 227 32-371 67-305 (319)
196 2r8b_A AGR_C_4453P, uncharacte 99.3 5.5E-12 1.9E-16 124.6 13.2 159 513-696 62-249 (251)
197 1nir_A Nitrite reductase; hemo 99.3 8.5E-10 2.9E-14 121.6 32.1 297 37-465 144-462 (543)
198 4e54_B DNA damage-binding prot 99.3 2.6E-10 8.9E-15 122.5 27.4 255 6-370 143-418 (435)
199 2xzm_R RACK1; ribosome, transl 99.3 7E-10 2.4E-14 115.0 29.5 256 6-371 50-328 (343)
200 3i2k_A Cocaine esterase; alpha 99.3 1.8E-12 6.1E-17 143.8 10.2 138 481-639 8-147 (587)
201 4g56_B MGC81050 protein; prote 99.3 4.7E-11 1.6E-15 124.7 20.3 230 32-371 96-331 (357)
202 2fx5_A Lipase; alpha-beta hydr 99.3 5.1E-12 1.8E-16 125.5 12.4 168 497-697 34-230 (258)
203 3pic_A CIP2; alpha/beta hydrol 99.3 1.2E-11 4.2E-16 124.2 15.0 112 493-636 90-218 (375)
204 1qe3_A PNB esterase, para-nitr 99.3 2.5E-12 8.5E-17 139.1 9.7 169 490-676 80-316 (489)
205 1vyh_C Platelet-activating fac 99.3 6.8E-10 2.3E-14 118.2 28.6 245 6-371 131-399 (410)
206 1dqz_A 85C, protein (antigen 8 99.3 2.9E-11 1E-15 121.6 16.9 190 481-695 5-278 (280)
207 3rm3_A MGLP, thermostable mono 99.3 7.8E-12 2.7E-16 124.7 12.4 158 513-695 40-269 (270)
208 3dwl_C Actin-related protein 2 99.3 2E-11 6.9E-16 128.3 16.0 227 32-371 13-270 (377)
209 1qlw_A Esterase; anisotropic r 99.3 8.2E-11 2.8E-15 121.2 20.0 95 603-697 199-323 (328)
210 4f0j_A Probable hydrolytic enz 99.3 6E-11 2.1E-15 120.8 18.6 128 480-636 18-148 (315)
211 3fm0_A Protein CIAO1; WDR39,SG 99.3 5.7E-10 1.9E-14 115.8 25.9 223 6-333 39-285 (345)
212 1jof_A Carboxy-CIS,CIS-muconat 99.3 9.3E-10 3.2E-14 115.2 27.6 193 63-334 17-227 (365)
213 1sq9_A Antiviral protein SKI8; 99.3 3.3E-10 1.1E-14 119.7 24.1 227 5-334 36-323 (397)
214 1got_B GT-beta; complex (GTP-b 99.3 1.9E-09 6.5E-14 111.6 29.3 242 6-371 78-331 (340)
215 4gga_A P55CDC, cell division c 99.3 1.8E-09 6.1E-14 115.4 29.1 279 33-462 108-396 (420)
216 2vdu_B TRNA (guanine-N(7)-)-me 99.3 7.1E-10 2.4E-14 119.7 26.1 195 32-329 104-337 (450)
217 3k26_A Polycomb protein EED; W 99.3 5.9E-10 2E-14 116.1 24.6 145 32-258 20-177 (366)
218 3gff_A IROE-like serine hydrol 99.3 1.1E-11 3.9E-16 126.7 11.0 190 480-694 10-265 (331)
219 2j04_A TAU60, YPL007P, hypothe 99.3 2.3E-10 8E-15 122.8 21.3 159 157-371 107-286 (588)
220 1erj_A Transcriptional repress 99.3 2.7E-09 9.1E-14 112.9 29.2 200 33-334 126-342 (393)
221 1r5m_A SIR4-interacting protei 99.3 6.1E-10 2.1E-14 118.5 24.2 215 6-333 131-361 (425)
222 3ei3_B DNA damage-binding prot 99.3 2.7E-09 9.1E-14 112.3 28.8 255 5-371 96-371 (383)
223 2pbi_B Guanine nucleotide-bind 99.3 3.9E-09 1.3E-13 109.9 29.6 243 6-371 87-345 (354)
224 1imj_A CIB, CCG1-interacting f 99.3 3.1E-11 1.1E-15 115.3 12.6 172 491-693 15-208 (210)
225 3odt_A Protein DOA1; ubiquitin 99.3 3.5E-09 1.2E-13 107.5 28.7 274 32-466 20-301 (313)
226 4ery_A WD repeat-containing pr 99.3 4.2E-09 1.4E-13 107.4 29.3 245 6-371 46-298 (312)
227 1qks_A Cytochrome CD1 nitrite 99.3 9.9E-09 3.4E-13 113.0 34.1 328 5-467 177-544 (567)
228 2mad_H Methylamine dehydrogena 99.3 7.7E-09 2.6E-13 108.1 31.7 303 37-467 27-356 (373)
229 4g4g_A 4-O-methyl-glucuronoyl 99.2 1E-10 3.4E-15 118.9 16.1 111 493-636 123-252 (433)
230 2aq5_A Coronin-1A; WD40 repeat 99.2 6.3E-10 2.2E-14 118.1 23.3 253 5-368 57-329 (402)
231 3dw8_B Serine/threonine-protei 99.2 2.3E-09 7.7E-14 115.3 28.0 125 175-334 227-374 (447)
232 4gga_A P55CDC, cell division c 99.2 3.1E-09 1.1E-13 113.5 28.7 252 5-371 125-383 (420)
233 3i2n_A WD repeat-containing pr 99.2 1E-09 3.5E-14 113.9 23.5 215 5-330 44-290 (357)
234 4f21_A Carboxylesterase/phosph 99.2 1.7E-10 5.6E-15 113.1 16.1 108 583-696 114-245 (246)
235 3vdx_A Designed 16NM tetrahedr 99.2 3E-10 1E-14 122.6 19.3 122 482-637 3-127 (456)
236 2qjw_A Uncharacterized protein 99.2 6.4E-11 2.2E-15 109.7 11.0 152 513-693 4-175 (176)
237 1k8k_C P40, ARP2/3 complex 41 99.2 5.3E-09 1.8E-13 109.2 27.0 217 5-331 30-274 (372)
238 2ynn_A Coatomer subunit beta'; 99.2 4.7E-09 1.6E-13 106.7 25.9 214 6-334 36-260 (304)
239 3dwl_C Actin-related protein 2 99.2 2.7E-10 9.3E-15 119.6 16.3 216 5-317 33-270 (377)
240 4ggc_A P55CDC, cell division c 99.2 1.6E-08 5.6E-13 102.9 28.9 278 34-461 29-315 (318)
241 3u1t_A DMMA haloalkane dehalog 99.2 1.2E-09 4E-14 110.8 19.8 113 491-637 17-131 (309)
242 2oiz_A Aromatic amine dehydrog 99.2 2.5E-08 8.6E-13 104.0 30.2 92 6-104 32-125 (361)
243 2mad_H Methylamine dehydrogena 99.2 7.9E-09 2.7E-13 108.0 26.2 291 6-335 48-352 (373)
244 2y6u_A Peroxisomal membrane pr 99.2 1.6E-10 5.5E-15 122.4 13.1 134 487-638 25-173 (398)
245 3jrp_A Fusion protein of prote 99.1 8.2E-09 2.8E-13 107.9 25.8 226 32-371 13-275 (379)
246 1pgu_A Actin interacting prote 99.1 1.3E-08 4.6E-13 114.0 28.9 221 5-334 39-284 (615)
247 3dm0_A Maltose-binding peripla 99.1 1.2E-08 3.9E-13 116.7 28.6 217 6-334 406-633 (694)
248 2oaj_A Protein SNI1; WD40 repe 99.1 1.4E-08 4.8E-13 118.9 29.9 82 5-104 79-170 (902)
249 2dg1_A DRP35, lactonase; beta 99.1 1.4E-08 4.8E-13 104.5 26.3 145 157-333 66-213 (333)
250 2h7c_A Liver carboxylesterase 99.1 8.6E-11 2.9E-15 128.8 9.8 132 489-638 95-233 (542)
251 3r0v_A Alpha/beta hydrolase fo 99.1 2.6E-09 9E-14 105.4 19.5 116 486-638 6-122 (262)
252 3sjl_D Methylamine dehydrogena 99.1 5.8E-08 2E-12 100.3 29.4 312 36-466 38-368 (386)
253 3hss_A Putative bromoperoxidas 99.1 6.8E-10 2.3E-14 111.9 14.7 103 513-638 43-146 (293)
254 3e5z_A Putative gluconolactona 99.1 2.4E-08 8.1E-13 100.9 26.2 258 17-408 16-290 (296)
255 2hes_X YDR267CP; beta-propelle 99.1 1.9E-08 6.4E-13 103.6 25.8 191 32-330 16-229 (330)
256 2ogt_A Thermostable carboxyles 99.1 2.1E-10 7.2E-15 124.3 11.4 132 489-638 81-224 (498)
257 2ha2_A ACHE, acetylcholinester 99.1 1.1E-10 3.6E-15 128.1 9.1 132 489-637 93-232 (543)
258 1yfq_A Cell cycle arrest prote 99.1 1.3E-08 4.4E-13 104.9 24.4 214 5-334 33-283 (342)
259 3iz6_a 40S ribosomal protein R 99.1 1.5E-08 5.1E-13 106.6 25.1 236 157-465 88-333 (380)
260 3dqz_A Alpha-hydroxynitrIle ly 99.1 8.6E-10 2.9E-14 108.7 14.5 101 514-637 5-108 (258)
261 2r11_A Carboxylesterase NP; 26 99.1 2.7E-09 9.2E-14 108.5 18.2 123 483-638 46-170 (306)
262 3c75_H MADH, methylamine dehyd 99.1 4E-08 1.4E-12 103.3 27.4 308 40-466 82-407 (426)
263 2j04_B YDR362CP, TAU91; beta p 99.1 1.6E-08 5.4E-13 110.7 25.3 215 5-333 183-428 (524)
264 3qit_A CURM TE, polyketide syn 99.1 1.8E-09 6.2E-14 107.7 16.2 122 484-638 6-131 (286)
265 4g9e_A AHL-lactonase, alpha/be 99.1 2.2E-10 7.4E-15 114.3 9.4 119 482-635 3-126 (279)
266 2pm7_B Protein transport prote 99.1 2.8E-08 9.7E-13 100.5 25.2 228 32-371 11-273 (297)
267 2qs9_A Retinoblastoma-binding 99.1 2.1E-09 7.1E-14 101.3 15.6 150 513-699 4-190 (194)
268 2xyi_A Probable histone-bindin 99.1 2.7E-08 9.4E-13 106.5 26.3 200 29-331 127-353 (430)
269 2oiz_A Aromatic amine dehydrog 99.1 5.3E-08 1.8E-12 101.5 27.7 313 40-469 13-342 (361)
270 4ggc_A P55CDC, cell division c 99.1 7.5E-08 2.6E-12 97.9 28.4 252 5-371 45-303 (318)
271 3qvm_A OLEI00960; structural g 99.1 4.6E-10 1.6E-14 112.0 11.4 99 514-637 29-133 (282)
272 3mmy_A MRNA export factor; mRN 99.1 3.2E-08 1.1E-12 102.8 26.0 113 31-220 40-162 (368)
273 3f3f_A Nucleoporin SEH1; struc 99.1 6.4E-09 2.2E-13 107.0 20.5 204 32-330 13-248 (351)
274 3i28_A Epoxide hydrolase 2; ar 99.1 3.5E-09 1.2E-13 117.3 19.7 122 481-636 236-361 (555)
275 1tht_A Thioesterase; 2.10A {Vi 99.1 1.2E-09 4.2E-14 110.9 14.5 130 482-636 7-138 (305)
276 3k26_A Polycomb protein EED; W 99.1 9.5E-09 3.2E-13 106.8 21.7 260 6-371 45-354 (366)
277 3h2g_A Esterase; xanthomonas o 99.1 1.1E-09 3.7E-14 116.1 14.4 151 479-638 43-210 (397)
278 3jrp_A Fusion protein of prote 99.1 2.8E-08 9.5E-13 103.8 25.1 229 157-468 33-295 (379)
279 3sjl_D Methylamine dehydrogena 99.0 1E-07 3.4E-12 98.5 27.9 282 5-414 59-373 (386)
280 3fsg_A Alpha/beta superfamily 99.0 1.7E-09 5.7E-14 107.4 14.2 80 550-637 43-124 (272)
281 3ia2_A Arylesterase; alpha-bet 99.0 3.5E-09 1.2E-13 105.5 16.5 116 487-636 3-121 (271)
282 1qks_A Cytochrome CD1 nitrite 99.0 1.7E-07 5.7E-12 103.2 31.3 203 34-334 157-374 (567)
283 1uxo_A YDEN protein; hydrolase 99.0 1.2E-09 4E-14 102.8 12.3 154 513-697 4-189 (192)
284 4aow_A Guanine nucleotide-bind 99.0 9.6E-08 3.3E-12 98.1 27.6 256 6-371 62-325 (340)
285 1p0i_A Cholinesterase; serine 99.0 3.6E-10 1.2E-14 123.6 9.6 132 489-638 89-228 (529)
286 3c75_H MADH, methylamine dehyd 99.0 3.1E-08 1.1E-12 104.2 23.9 93 5-104 99-194 (426)
287 3vu4_A KMHSV2; beta-propeller 99.0 3.1E-08 1.1E-12 103.0 24.0 217 31-371 20-259 (355)
288 3kxp_A Alpha-(N-acetylaminomet 99.0 2.3E-09 7.7E-14 109.4 14.9 112 491-637 56-169 (314)
289 3ibt_A 1H-3-hydroxy-4-oxoquino 99.0 2.9E-09 1E-13 105.3 15.3 114 491-637 7-123 (264)
290 3sty_A Methylketone synthase 1 99.0 2.6E-09 8.8E-14 105.9 14.6 101 513-636 12-115 (267)
291 3guu_A Lipase A; protein struc 99.0 2.9E-09 9.9E-14 112.5 15.6 145 480-637 73-237 (462)
292 3dr2_A Exported gluconolactona 99.0 7.9E-08 2.7E-12 97.6 25.9 184 70-334 33-225 (305)
293 1ea5_A ACHE, acetylcholinester 99.0 4.7E-10 1.6E-14 122.6 9.4 132 489-638 91-230 (537)
294 3g4e_A Regucalcin; six bladed 99.0 5.9E-08 2E-12 98.1 24.3 233 33-372 15-261 (297)
295 3kda_A CFTR inhibitory factor 99.0 1E-08 3.4E-13 103.6 18.0 112 490-636 17-131 (301)
296 2rau_A Putative esterase; NP_3 99.0 1.8E-09 6.2E-14 112.3 12.5 85 546-635 84-178 (354)
297 3odt_A Protein DOA1; ubiquitin 99.0 9.2E-08 3.2E-12 96.9 24.8 235 6-368 40-282 (313)
298 1ukc_A ESTA, esterase; fungi, 99.0 5.9E-10 2E-14 121.4 8.7 133 489-638 82-226 (522)
299 2fj0_A JuvenIle hormone estera 99.0 3.2E-10 1.1E-14 124.4 6.5 134 489-637 87-233 (551)
300 3g4e_A Regucalcin; six bladed 99.0 4.8E-08 1.6E-12 98.8 22.3 223 157-448 35-263 (297)
301 2e3j_A Epoxide hydrolase EPHB; 99.0 1.2E-08 4.1E-13 106.2 18.2 118 490-637 10-131 (356)
302 3bg1_A Protein SEC13 homolog; 99.0 3.5E-08 1.2E-12 100.8 21.1 227 32-371 15-281 (316)
303 2ocg_A Valacyclovir hydrolase; 99.0 6E-09 2E-13 102.7 14.7 114 491-636 10-128 (254)
304 4dnp_A DAD2; alpha/beta hydrol 99.0 1.7E-09 5.8E-14 107.1 10.6 100 513-637 20-125 (269)
305 3e0x_A Lipase-esterase related 99.0 2.2E-09 7.7E-14 104.6 11.3 104 513-639 16-121 (245)
306 3oos_A Alpha/beta hydrolase fa 99.0 2E-09 6.9E-14 107.1 11.0 100 514-638 24-127 (278)
307 2hes_X YDR267CP; beta-propelle 99.0 6.6E-08 2.3E-12 99.4 22.8 217 6-330 35-279 (330)
308 3gre_A Serine/threonine-protei 99.0 8.6E-08 2.9E-12 102.7 24.5 196 31-334 64-293 (437)
309 3e5z_A Putative gluconolactona 99.0 1.4E-07 4.8E-12 95.2 24.5 231 6-334 51-287 (296)
310 2bce_A Cholesterol esterase; h 98.9 6.5E-10 2.2E-14 122.1 7.4 142 487-637 75-223 (579)
311 3v7d_B Cell division control p 98.9 3.2E-07 1.1E-11 99.1 28.5 285 37-466 127-426 (464)
312 3om8_A Probable hydrolase; str 98.9 2E-08 6.9E-13 99.8 17.5 117 487-636 9-127 (266)
313 2pm7_B Protein transport prote 98.9 1E-07 3.5E-12 96.3 22.9 221 5-333 31-287 (297)
314 2ghs_A AGR_C_1268P; regucalcin 98.9 2.2E-07 7.4E-12 95.4 25.5 225 33-371 51-290 (326)
315 3g9x_A Haloalkane dehalogenase 98.9 6.1E-09 2.1E-13 105.0 13.6 113 491-636 18-132 (299)
316 1llf_A Lipase 3; candida cylin 98.9 1.9E-09 6.6E-14 117.6 10.1 135 489-637 94-244 (534)
317 1dx4_A ACHE, acetylcholinester 98.9 2.5E-09 8.6E-14 118.0 11.1 115 512-638 140-268 (585)
318 3dr2_A Exported gluconolactona 98.9 1.8E-07 6.1E-12 95.0 24.1 246 19-371 35-295 (305)
319 3jro_A Fusion protein of prote 98.9 6.5E-08 2.2E-12 111.4 22.9 229 32-371 11-273 (753)
320 2dg1_A DRP35, lactonase; beta 98.9 3E-07 1E-11 94.4 25.6 233 6-333 67-316 (333)
321 3vu4_A KMHSV2; beta-propeller 98.9 5.1E-07 1.7E-11 93.8 27.5 209 6-333 41-271 (355)
322 3v7d_B Cell division control p 98.9 1E-06 3.5E-11 95.0 30.8 293 5-459 142-463 (464)
323 2xyi_A Probable histone-bindin 98.9 1.5E-07 5.1E-12 100.7 23.9 219 6-330 152-409 (430)
324 4a11_B DNA excision repair pro 98.9 7.4E-07 2.5E-11 93.9 29.1 237 31-371 100-353 (408)
325 1tqh_A Carboxylesterase precur 98.9 1.1E-08 3.7E-13 100.6 13.6 80 547-634 35-116 (247)
326 4fle_A Esterase; structural ge 98.9 2.8E-09 9.6E-14 101.1 9.1 143 513-693 2-191 (202)
327 3p2m_A Possible hydrolase; alp 98.9 1.8E-08 6E-13 103.7 15.3 109 492-636 69-180 (330)
328 1npe_A Nidogen, entactin; glyc 98.9 5E-07 1.7E-11 89.7 25.4 193 42-333 1-198 (267)
329 2ghs_A AGR_C_1268P; regucalcin 98.9 1.9E-07 6.5E-12 95.8 22.4 212 6-318 72-291 (326)
330 1zoi_A Esterase; alpha/beta hy 98.9 2.2E-08 7.6E-13 99.9 15.0 118 487-636 4-124 (276)
331 2oaj_A Protein SNI1; WD40 repe 98.9 5E-08 1.7E-12 114.3 20.3 202 32-334 19-243 (902)
332 3v48_A Aminohydrolase, putativ 98.9 3E-08 1E-12 98.6 15.9 99 513-636 15-116 (268)
333 1q0r_A RDMC, aclacinomycin met 98.9 1.9E-08 6.4E-13 101.8 14.5 117 490-637 8-129 (298)
334 1thg_A Lipase; hydrolase(carbo 98.9 2.1E-09 7.1E-14 117.6 7.6 134 489-636 102-251 (544)
335 1a88_A Chloroperoxidase L; hal 98.9 3.8E-08 1.3E-12 98.1 16.2 118 487-636 3-123 (275)
336 2pl5_A Homoserine O-acetyltran 98.9 3.7E-08 1.3E-12 102.7 16.6 80 551-637 85-180 (366)
337 3mmy_A MRNA export factor; mRN 98.9 6.1E-07 2.1E-11 93.0 25.8 246 5-371 64-334 (368)
338 3i1i_A Homoserine O-acetyltran 98.9 1.8E-08 6.1E-13 105.4 14.0 77 550-632 80-177 (377)
339 1isp_A Lipase; alpha/beta hydr 98.8 1.1E-08 3.7E-13 95.1 10.7 153 514-694 4-176 (181)
340 3fob_A Bromoperoxidase; struct 98.8 5.6E-08 1.9E-12 97.3 16.7 114 489-636 13-129 (281)
341 3bg1_A Protein SEC13 homolog; 98.8 8.6E-08 3E-12 97.9 18.3 227 5-333 35-295 (316)
342 3nwo_A PIP, proline iminopepti 98.8 8.4E-08 2.9E-12 98.7 18.3 117 491-635 36-159 (330)
343 3gre_A Serine/threonine-protei 98.8 1E-07 3.4E-12 102.1 19.1 196 33-333 30-245 (437)
344 2qmq_A Protein NDRG2, protein 98.8 3.7E-08 1.3E-12 98.8 14.3 122 491-637 19-146 (286)
345 3bdv_A Uncharacterized protein 98.8 4.1E-08 1.4E-12 92.0 13.7 103 580-694 59-187 (191)
346 3fla_A RIFR; alpha-beta hydrol 98.8 2.4E-08 8.2E-13 98.8 12.4 100 513-637 20-125 (267)
347 2ece_A 462AA long hypothetical 98.8 1.6E-05 5.5E-10 82.6 33.4 192 157-371 106-339 (462)
348 3f3f_A Nucleoporin SEH1; struc 98.8 4.8E-07 1.6E-11 92.8 22.0 83 6-105 34-131 (351)
349 3lrv_A PRE-mRNA-splicing facto 98.8 1.4E-06 4.6E-11 90.0 25.0 132 157-332 149-293 (343)
350 3jro_A Fusion protein of prote 98.8 3.5E-07 1.2E-11 105.3 22.4 222 157-461 31-285 (753)
351 2yys_A Proline iminopeptidase- 98.8 6.9E-08 2.4E-12 97.0 14.5 119 484-636 4-128 (286)
352 1a8s_A Chloroperoxidase F; hal 98.8 7.9E-08 2.7E-12 95.6 14.7 116 487-636 3-121 (273)
353 1wom_A RSBQ, sigma factor SIGB 98.8 5.2E-08 1.8E-12 97.0 13.2 98 514-636 21-124 (271)
354 1ycd_A Hypothetical 27.3 kDa p 98.8 4.8E-09 1.6E-13 102.7 5.4 112 583-697 83-240 (243)
355 2b61_A Homoserine O-acetyltran 98.8 7.1E-08 2.4E-12 101.0 14.5 80 551-636 94-188 (377)
356 2cjp_A Epoxide hydrolase; HET: 98.7 1E-07 3.5E-12 97.8 15.2 115 490-636 18-138 (328)
357 3bf7_A Esterase YBFF; thioeste 98.7 7E-08 2.4E-12 95.1 13.4 96 514-634 17-113 (255)
358 3dsm_A Uncharacterized protein 98.7 3.9E-06 1.3E-10 86.0 26.9 224 4-335 16-255 (328)
359 1mtz_A Proline iminopeptidase; 98.7 7.3E-08 2.5E-12 97.0 13.5 118 490-637 12-132 (293)
360 1npe_A Nidogen, entactin; glyc 98.7 4.1E-06 1.4E-10 82.9 25.8 224 157-465 10-242 (267)
361 3bwx_A Alpha/beta hydrolase; Y 98.7 9.6E-08 3.3E-12 95.8 14.0 121 482-634 5-129 (285)
362 2qvb_A Haloalkane dehalogenase 98.7 1.6E-07 5.5E-12 94.2 15.6 113 490-637 15-134 (297)
363 1mda_H Methylamine dehydrogena 98.7 5.1E-07 1.7E-11 93.3 19.4 127 307-466 219-351 (368)
364 1a8q_A Bromoperoxidase A1; hal 98.7 1.5E-07 5.1E-12 93.7 14.8 116 487-636 3-121 (274)
365 3v65_B Low-density lipoprotein 98.7 2.8E-06 9.6E-11 89.1 24.7 179 62-334 96-278 (386)
366 1azw_A Proline iminopeptidase; 98.7 1.4E-07 4.8E-12 95.9 14.3 120 484-636 13-136 (313)
367 1wm1_A Proline iminopeptidase; 98.7 1.5E-07 5.1E-12 95.9 14.5 119 484-635 16-138 (317)
368 3bix_A Neuroligin-1, neuroligi 98.7 1.1E-08 3.9E-13 112.5 6.4 132 489-636 108-248 (574)
369 2j04_B YDR362CP, TAU91; beta p 98.7 6.6E-07 2.3E-11 97.8 20.4 143 175-371 267-416 (524)
370 1j1i_A META cleavage compound 98.7 2.7E-07 9.1E-12 93.2 16.1 116 490-636 23-140 (296)
371 3lrv_A PRE-mRNA-splicing facto 98.7 2.4E-06 8.2E-11 88.1 23.3 185 31-317 126-321 (343)
372 1mj5_A 1,3,4,6-tetrachloro-1,4 98.7 3.6E-07 1.2E-11 92.1 16.4 114 489-637 15-135 (302)
373 3v64_C Agrin; beta propeller, 98.7 6.1E-06 2.1E-10 85.2 25.5 179 62-334 53-235 (349)
374 3hrp_A Uncharacterized protein 98.7 8.9E-06 3E-10 86.0 27.3 200 32-333 132-354 (409)
375 2xt0_A Haloalkane dehalogenase 98.7 1.5E-07 5.3E-12 95.1 12.9 114 493-637 33-150 (297)
376 1brt_A Bromoperoxidase A2; hal 98.6 1.7E-07 5.9E-12 93.5 12.5 82 546-636 41-125 (277)
377 3dsm_A Uncharacterized protein 98.6 3.8E-06 1.3E-10 86.1 22.7 231 5-333 64-302 (328)
378 4gq1_A NUP37; propeller, trans 98.6 2E-06 6.9E-11 90.6 20.8 52 157-220 166-220 (393)
379 2xua_A PCAD, 3-oxoadipate ENOL 98.6 3.9E-07 1.3E-11 90.3 14.2 117 490-637 9-127 (266)
380 2wfl_A Polyneuridine-aldehyde 98.6 2.2E-07 7.4E-12 92.2 12.2 100 514-636 11-113 (264)
381 1hkh_A Gamma lactamase; hydrol 98.6 2.7E-07 9.1E-12 92.1 13.0 81 547-636 42-125 (279)
382 1b6g_A Haloalkane dehalogenase 98.6 1.5E-07 5.3E-12 95.7 11.1 114 493-637 34-151 (310)
383 1rwi_B Serine/threonine-protei 98.6 2.4E-05 8.4E-10 77.1 26.8 195 32-334 25-223 (270)
384 1mda_H Methylamine dehydrogena 98.6 1.2E-06 4E-11 90.6 17.5 93 6-105 47-142 (368)
385 3p5b_L Low density lipoprotein 98.6 1.7E-05 5.7E-10 83.5 26.7 179 62-334 92-278 (400)
386 2d81_A PHB depolymerase; alpha 98.6 5.4E-08 1.8E-12 98.2 7.1 101 597-697 6-178 (318)
387 3r40_A Fluoroacetate dehalogen 98.6 7.2E-07 2.5E-11 89.8 15.4 113 489-636 19-138 (306)
388 4gq1_A NUP37; propeller, trans 98.6 3.5E-06 1.2E-10 88.8 21.2 38 277-317 340-378 (393)
389 2wue_A 2-hydroxy-6-OXO-6-pheny 98.6 6E-07 2E-11 90.4 14.2 118 490-637 20-141 (291)
390 1ijq_A LDL receptor, low-densi 98.6 2E-05 7E-10 80.0 25.7 179 62-334 10-196 (316)
391 1xkl_A SABP2, salicylic acid-b 98.6 3.3E-07 1.1E-11 91.3 12.0 99 514-635 5-106 (273)
392 2q0x_A Protein DUF1749, unchar 98.6 3.7E-07 1.3E-11 93.9 12.6 127 483-637 16-145 (335)
393 2ovr_B FBW7, F-BOX/WD repeat p 98.5 6.7E-05 2.3E-09 80.2 30.8 297 5-461 139-442 (445)
394 3v65_B Low-density lipoprotein 98.5 2.3E-05 8E-10 82.0 25.7 210 19-334 106-319 (386)
395 2ovr_B FBW7, F-BOX/WD repeat p 98.5 5.1E-05 1.8E-09 81.1 28.9 268 37-466 124-396 (445)
396 2xmz_A Hydrolase, alpha/beta h 98.5 3.7E-07 1.3E-11 90.6 11.1 98 514-636 17-117 (269)
397 1ijq_A LDL receptor, low-densi 98.5 3.2E-05 1.1E-09 78.6 25.6 220 5-334 10-239 (316)
398 1ehy_A Protein (soluble epoxid 98.5 1.2E-06 4.3E-11 88.1 14.9 112 490-636 16-133 (294)
399 3v64_C Agrin; beta propeller, 98.5 4.4E-05 1.5E-09 78.7 26.7 210 19-334 63-276 (349)
400 3c6x_A Hydroxynitrilase; atomi 98.5 2.8E-07 9.7E-12 90.9 9.6 100 514-636 4-106 (257)
401 2wj6_A 1H-3-hydroxy-4-oxoquina 98.5 6.1E-07 2.1E-11 89.5 11.8 114 490-635 11-127 (276)
402 2puj_A 2-hydroxy-6-OXO-6-pheny 98.5 4E-07 1.4E-11 91.4 10.4 79 549-637 58-139 (286)
403 1c4x_A BPHD, protein (2-hydrox 98.5 1.1E-06 3.9E-11 87.8 13.4 118 489-636 13-137 (285)
404 2ece_A 462AA long hypothetical 98.5 4.2E-05 1.4E-09 79.5 25.1 254 4-317 105-399 (462)
405 1ys1_X Lipase; CIS peptide Leu 98.5 1.1E-06 3.6E-11 89.3 13.0 84 546-638 32-115 (320)
406 1tca_A Lipase; hydrolase(carbo 98.4 1.2E-06 4E-11 89.0 12.8 120 492-638 13-136 (317)
407 4i19_A Epoxide hydrolase; stru 98.4 1.8E-06 6.3E-11 90.5 14.5 118 490-637 75-204 (388)
408 3sov_A LRP-6, low-density lipo 98.4 3.6E-05 1.2E-09 78.2 23.6 180 61-334 12-198 (318)
409 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 1.8E-05 6.3E-10 80.0 21.6 246 32-371 19-286 (314)
410 3n2z_B Lysosomal Pro-X carboxy 98.4 1.1E-06 3.9E-11 92.7 12.8 88 548-638 61-162 (446)
411 2vat_A Acetyl-COA--deacetylcep 98.4 1.1E-06 3.6E-11 94.5 12.6 81 551-638 138-236 (444)
412 1fwx_A Nitrous oxide reductase 98.4 7.1E-06 2.4E-10 88.4 18.4 263 5-317 112-406 (595)
413 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 3.8E-05 1.3E-09 77.6 23.2 238 6-333 47-299 (314)
414 1iup_A META-cleavage product h 98.4 9.9E-07 3.4E-11 88.3 11.1 76 553-637 52-130 (282)
415 2w18_A PALB2, fancn, partner a 98.4 1.6E-05 5.6E-10 80.0 19.5 145 157-329 203-355 (356)
416 1n7d_A LDL receptor, low-densi 98.4 7.3E-06 2.5E-10 92.7 19.1 179 62-334 386-572 (699)
417 1pja_A Palmitoyl-protein thioe 98.4 9.4E-07 3.2E-11 89.3 10.8 101 513-637 36-139 (302)
418 3afi_E Haloalkane dehalogenase 98.4 2.2E-06 7.6E-11 87.3 13.6 112 491-635 15-128 (316)
419 3m0c_C LDL receptor, low-densi 98.4 4.8E-05 1.7E-09 86.6 25.7 179 62-334 404-590 (791)
420 3fvz_A Peptidyl-glycine alpha- 98.4 7.3E-05 2.5E-09 76.4 24.6 251 32-371 25-309 (329)
421 3fvz_A Peptidyl-glycine alpha- 98.4 6E-05 2E-09 77.1 23.8 228 6-333 70-322 (329)
422 1r3d_A Conserved hypothetical 98.4 9.3E-07 3.2E-11 87.5 9.6 101 514-636 17-121 (264)
423 3p5b_L Low density lipoprotein 98.4 8.4E-05 2.9E-09 78.1 25.2 221 6-334 93-321 (400)
424 3hrp_A Uncharacterized protein 98.3 5.8E-05 2E-09 79.7 23.5 197 6-295 153-361 (409)
425 3l80_A Putative uncharacterize 98.3 8.9E-07 3.1E-11 88.8 8.7 74 553-635 67-143 (292)
426 1fwx_A Nitrous oxide reductase 98.3 3.5E-05 1.2E-09 83.0 21.2 208 33-333 87-308 (595)
427 1bu8_A Protein (pancreatic lip 98.3 1.1E-06 3.9E-11 93.5 9.5 109 513-637 70-181 (452)
428 3qmv_A Thioesterase, REDJ; alp 98.3 4.2E-07 1.4E-11 90.8 5.9 130 480-634 13-154 (280)
429 1gpl_A RP2 lipase; serine este 98.3 8.5E-07 2.9E-11 94.2 8.2 109 513-637 70-181 (432)
430 2oit_A Nucleoporin 214KDA; NH2 98.3 2.1E-05 7.4E-10 83.8 19.1 118 175-333 150-278 (434)
431 2z2n_A Virginiamycin B lyase; 98.3 0.0012 3.9E-08 65.8 31.1 192 31-331 15-211 (299)
432 2psd_A Renilla-luciferin 2-mon 98.3 2.2E-06 7.6E-11 87.4 10.7 113 490-635 28-144 (318)
433 3sov_A LRP-6, low-density lipo 98.3 7.2E-05 2.4E-09 75.9 21.8 198 32-334 36-239 (318)
434 2oit_A Nucleoporin 214KDA; NH2 98.3 3.9E-05 1.3E-09 81.8 20.7 147 32-255 94-254 (434)
435 1q7f_A NHL, brain tumor CG1071 98.3 0.00016 5.4E-09 72.0 24.1 201 32-333 31-238 (286)
436 1u2e_A 2-hydroxy-6-ketonona-2, 98.3 2.8E-06 9.6E-11 85.1 11.1 79 549-637 61-142 (289)
437 3ds8_A LIN2722 protein; unkonw 98.3 6.1E-06 2.1E-10 81.0 13.3 60 578-639 72-136 (254)
438 1p22_A F-BOX/WD-repeat protein 98.3 6.9E-05 2.4E-09 79.9 22.7 185 36-334 137-326 (435)
439 1ex9_A Lactonizing lipase; alp 98.3 3.5E-06 1.2E-10 84.3 11.6 81 546-638 30-110 (285)
440 2iwa_A Glutamine cyclotransfer 98.3 3.1E-05 1.1E-09 75.6 17.8 207 24-333 12-237 (266)
441 3icv_A Lipase B, CALB; circula 98.3 4.7E-06 1.6E-10 83.2 12.2 83 547-639 86-171 (316)
442 4a0p_A LRP6, LRP-6, low-densit 98.3 0.00022 7.7E-09 79.3 26.8 181 62-334 15-198 (628)
443 3qyj_A ALR0039 protein; alpha/ 98.2 5.2E-06 1.8E-10 83.4 12.0 111 490-635 12-129 (291)
444 1m33_A BIOH protein; alpha-bet 98.2 3E-06 1E-10 83.3 9.9 75 548-636 33-108 (258)
445 1rwi_B Serine/threonine-protei 98.2 0.00029 9.8E-09 69.3 24.5 193 32-333 68-264 (270)
446 1w52_X Pancreatic lipase relat 98.2 1.6E-06 5.5E-11 92.3 8.3 109 513-637 70-181 (452)
447 3m0c_C LDL receptor, low-densi 98.2 0.00028 9.5E-09 80.3 26.7 202 31-334 424-633 (791)
448 3c5v_A PME-1, protein phosphat 98.2 2.4E-05 8.4E-10 79.4 16.5 100 514-635 39-144 (316)
449 1n7d_A LDL receptor, low-densi 98.2 1.4E-05 4.9E-10 90.3 16.1 202 29-334 404-615 (699)
450 3lcr_A Tautomycetin biosynthet 98.2 1.5E-05 5.1E-10 81.2 14.7 80 548-636 103-185 (319)
451 3g02_A Epoxide hydrolase; alph 98.2 1.5E-05 5.3E-10 83.8 14.9 117 491-637 93-220 (408)
452 3b12_A Fluoroacetate dehalogen 97.5 1.9E-07 6.3E-12 94.1 0.0 99 514-637 26-131 (304)
453 3no2_A Uncharacterized protein 98.2 0.00039 1.3E-08 68.9 24.2 182 59-334 12-196 (276)
454 1hpl_A Lipase; hydrolase(carbo 98.1 6.1E-06 2.1E-10 87.4 10.3 83 552-637 96-180 (449)
455 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0007 2.4E-08 75.3 27.2 221 5-334 15-238 (628)
456 3fle_A SE_1780 protein; struct 98.1 4.5E-05 1.5E-09 74.1 14.8 57 580-638 77-138 (249)
457 2p4o_A Hypothetical protein; p 98.1 0.00098 3.4E-08 67.1 25.1 247 19-371 20-276 (306)
458 2x5x_A PHB depolymerase PHAZ7; 98.1 7.7E-06 2.6E-10 83.3 9.3 88 546-638 72-166 (342)
459 3s94_A LRP-6, low-density lipo 98.1 0.00059 2E-08 75.8 25.2 180 61-334 17-203 (619)
460 2qc5_A Streptogramin B lactona 98.1 0.0092 3.1E-07 59.1 32.2 193 31-332 20-217 (300)
461 1rp1_A Pancreatic lipase relat 98.1 7.4E-06 2.5E-10 86.7 8.6 85 549-637 93-180 (450)
462 1q7f_A NHL, brain tumor CG1071 98.0 0.001 3.5E-08 66.0 23.9 120 157-316 142-267 (286)
463 3s94_A LRP-6, low-density lipo 98.0 0.00045 1.5E-08 76.7 22.0 202 30-335 39-245 (619)
464 2qe8_A Uncharacterized protein 97.9 0.0016 5.4E-08 66.8 23.9 235 19-333 7-278 (343)
465 3no2_A Uncharacterized protein 97.9 0.0014 4.9E-08 64.7 22.5 80 5-104 15-94 (276)
466 2dst_A Hypothetical protein TT 97.9 5.9E-05 2E-09 65.3 10.6 64 553-625 40-103 (131)
467 3qqz_A Putative uncharacterize 97.9 0.0014 4.8E-08 63.4 21.0 210 22-333 20-253 (255)
468 2zyr_A Lipase, putative; fatty 97.9 1.4E-05 4.7E-10 84.3 7.0 110 581-694 109-230 (484)
469 2iwa_A Glutamine cyclotransfer 97.8 0.0016 5.4E-08 63.5 20.4 211 176-461 22-237 (266)
470 3nol_A Glutamine cyclotransfer 97.8 0.00074 2.5E-08 65.0 17.6 205 22-331 32-254 (262)
471 2w18_A PALB2, fancn, partner a 97.8 0.00059 2E-08 68.7 17.5 62 33-105 181-245 (356)
472 1p22_A F-BOX/WD-repeat protein 97.8 0.0026 8.9E-08 67.5 23.8 193 5-317 153-353 (435)
473 2z2n_A Virginiamycin B lyase; 97.8 0.011 3.7E-07 58.5 27.0 193 31-332 57-254 (299)
474 1kez_A Erythronolide synthase; 97.8 9.2E-05 3.1E-09 74.5 10.8 77 553-637 93-172 (300)
475 3ils_A PKS, aflatoxin biosynth 97.8 9.3E-05 3.2E-09 73.0 10.6 100 513-637 21-123 (265)
476 2qe8_A Uncharacterized protein 97.7 0.0028 9.5E-08 64.9 21.1 68 32-104 68-137 (343)
477 3lp5_A Putative cell surface h 97.7 0.00013 4.5E-09 70.8 9.9 58 579-638 77-139 (250)
478 1ei9_A Palmitoyl protein thioe 97.7 6.2E-05 2.1E-09 74.8 7.7 86 547-637 27-116 (279)
479 2p4o_A Hypothetical protein; p 97.6 0.016 5.3E-07 58.1 25.0 60 157-227 53-113 (306)
480 2qc5_A Streptogramin B lactona 97.6 0.033 1.1E-06 54.9 27.3 192 32-332 63-259 (300)
481 4ebb_A Dipeptidyl peptidase 2; 97.6 0.00041 1.4E-08 74.1 12.5 60 579-638 105-164 (472)
482 3nol_A Glutamine cyclotransfer 97.5 0.014 4.7E-07 56.2 20.8 200 176-449 44-247 (262)
483 2fp8_A Strictosidine synthase; 97.4 0.018 6.1E-07 58.1 22.2 145 158-333 102-269 (322)
484 3tc9_A Hypothetical hydrolase; 97.4 0.0021 7.1E-08 68.1 15.3 146 32-260 138-287 (430)
485 3nok_A Glutaminyl cyclase; bet 97.4 0.0032 1.1E-07 60.6 15.0 200 24-331 46-264 (268)
486 3mbr_X Glutamine cyclotransfer 97.3 0.015 5.1E-07 55.4 18.8 206 22-332 10-234 (243)
487 2fp8_A Strictosidine synthase; 97.3 0.042 1.4E-06 55.3 23.3 130 176-334 81-217 (322)
488 4hw6_A Hypothetical protein, I 97.3 0.013 4.5E-07 61.9 19.8 145 32-260 140-290 (433)
489 3qqz_A Putative uncharacterize 97.2 0.13 4.3E-06 49.6 24.3 115 175-330 27-150 (255)
490 3tej_A Enterobactin synthase c 97.2 0.00061 2.1E-08 69.5 8.4 77 553-637 125-204 (329)
491 3das_A Putative oxidoreductase 97.2 0.081 2.8E-06 53.5 23.5 289 17-403 17-347 (347)
492 3kya_A Putative phosphatase; s 97.2 0.015 5.1E-07 61.8 18.6 121 33-217 141-277 (496)
493 3tc9_A Hypothetical hydrolase; 97.1 0.047 1.6E-06 57.6 22.3 127 19-218 169-301 (430)
494 2hih_A Lipase 46 kDa form; A1 97.1 0.0019 6.5E-08 67.7 11.1 37 602-638 151-213 (431)
495 2dsn_A Thermostable lipase; T1 97.0 0.0042 1.4E-07 64.1 11.6 38 601-638 103-165 (387)
496 3nok_A Glutaminyl cyclase; bet 97.0 0.041 1.4E-06 52.9 17.5 202 177-457 57-262 (268)
497 2hfk_A Pikromycin, type I poly 96.9 0.0041 1.4E-07 62.9 10.5 76 553-636 115-199 (319)
498 3mbr_X Glutamine cyclotransfer 96.7 0.17 5.8E-06 48.1 19.6 205 176-458 22-232 (243)
499 3sre_A PON1, serum paraoxonase 96.7 0.034 1.2E-06 56.6 15.5 160 6-217 84-251 (355)
500 3a9g_A Putative uncharacterize 96.7 0.12 4E-06 52.9 19.8 153 157-331 49-229 (354)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=8e-51 Score=470.51 Aligned_cols=567 Identities=13% Similarity=0.047 Sum_probs=393.0
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCC--cc--cceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCC
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGA--KI--NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~--~~--~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~ 81 (706)
+|+++++.+ |+.+++....... .+ ..+.|||||++|||..+... ....+...++|++|+++++.++|+...
T Consensus 37 ~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~-~~r~~~~~~~~~~d~~~~~~~~l~~~~ 111 (740)
T 4a5s_A 37 NILVFNAEY----GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVK-QWRHSYTASYDIYDLNKRQLITEERIP 111 (740)
T ss_dssp EEEEEETTT----CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEE-CSSSCEEEEEEEEETTTTEECCSSCCC
T ss_pred cEEEEECCC----CceEEEEechhhhhhcccccceEECCCCCEEEEEECCee-eEEEccceEEEEEECCCCcEEEcccCC
Confidence 588999977 8877764322211 22 23899999999999876211 111133478999999999999987654
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 82 ~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
.. +..++|||||++|+|..+ ..||+
T Consensus 112 ~~-----~~~~~~SPdG~~la~~~~--------------------------------------------------~~i~~ 136 (740)
T 4a5s_A 112 NN-----TQWVTWSPVGHKLAYVWN--------------------------------------------------NDIYV 136 (740)
T ss_dssp TT-----EEEEEECSSTTCEEEEET--------------------------------------------------TEEEE
T ss_pred Cc-----ceeeEECCCCCEEEEEEC--------------------------------------------------CeEEE
Confidence 43 678999999999999842 57999
Q ss_pred Ecc-CCCceecCCCc---eE-----------------eeeeeCCCCcEEEEEeeccCcc--ccc----------c-----
Q 005240 162 GSL-DGTAKDFGTPA---VY-----------------TAVEPSPDQKYVLITSMHRPYS--YKV----------P----- 203 (706)
Q Consensus 162 ~~l-~g~~~~lt~~~---~~-----------------~~~~~SpDG~~i~~~~~~~~~~--~~~----------~----- 203 (706)
+++ +|+.++|+..+ .+ ..+.|||||++|+|.+.+...- +.. +
T Consensus 137 ~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~ 216 (740)
T 4a5s_A 137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV 216 (740)
T ss_dssp ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred EECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceee
Confidence 999 55888887641 11 2488999999999987654310 000 0
Q ss_pred ----cc--cccceEEEEecCC---C---eeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccc
Q 005240 204 ----CA--RFSQKVQVWTTDG---K---LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVE 271 (706)
Q Consensus 204 ----~~--~~~~~i~~~~~~~---~---~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~ 271 (706)
.. .....|++|++++ + +.+++.......... .....++|||||+. +++..+...
T Consensus 217 ~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~wspdg~~-~~~~~~r~~------ 282 (740)
T 4a5s_A 217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGD-------HYLCDVTWATQERI-SLQWLRRIQ------ 282 (740)
T ss_dssp ECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSC-------EEEEEEEEEETTEE-EEEEEESST------
T ss_pred cCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCC-------eEEEEEEEeCCCeE-EEEEeCCCC------
Confidence 00 0113799999998 6 555554311000000 11336799999985 555543321
Q ss_pred cCccceeeeecCCCCCCCC-------ceEEe--ecccc-----cccceecCCCceEE-EEeeccccceEEEEEcCCCCCC
Q 005240 272 VSPRDIIYTQPAEPAEGEK-------PEILH--KLDLR-----FRSVSWCDDSLALV-NETWYKTSQTRTWLVCPGSKDV 336 (706)
Q Consensus 272 ~~~~~~l~~~d~~~~~~~~-------~~~l~--~~~~~-----~~~~~wspDg~~l~-~~~~~~~~~~~l~~~d~~~~~~ 336 (706)
+...|+++|+ ++++ .+++. ..... ...|.|||||+.|+ +.+ ..++..+||++|+++ +
T Consensus 283 --~~~~i~~~d~---~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s-~~~G~~~l~~~~~~~--~ 354 (740)
T 4a5s_A 283 --NYSVMDICDY---DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS-NEEGYRHICYFQIDK--K 354 (740)
T ss_dssp --TEEEEEEEEE---ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE-CTTSCEEEEEEETTC--S
T ss_pred --CEEEEEEEEC---CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE-cCCCceEEEEEECCC--C
Confidence 2235889998 6666 34442 22222 34799999999988 554 455788999999998 4
Q ss_pred CceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCcee-eeecccc
Q 005240 337 APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE-RIWESNR 415 (706)
Q Consensus 337 ~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~-~l~~~~~ 415 (706)
+.++|+....... ..+++||+.|+|..... +. +....+||++++++++.+ .|+..-.
T Consensus 355 ~~~~lT~g~~~v~--------~~~~~d~~~i~f~~~~~------------~~--~~~~~~ly~v~~~g~~~~~~lt~~~~ 412 (740)
T 4a5s_A 355 DCTFITKGTWEVI--------GIEALTSDYLYYISNEY------------KG--MPGGRNLYKIQLIDYTKVTCLSCELN 412 (740)
T ss_dssp SCEESCCSSSCEE--------EEEEECSSEEEEEESCG------------GG--CTTCBEEEEEETTEEEEEEESSTTTS
T ss_pred ceEecccCCEEEE--------EEEEEeCCEEEEEEecC------------CC--CCceeEEEEEECCCCCcceeeccccC
Confidence 5778765543211 11346688888876320 00 134568999999876544 4442100
Q ss_pred hhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCCC----CCCCCCceEEEEEEccC
Q 005240 416 EKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY----PTLASLQKEMIKYQRKD 491 (706)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~~----~~~~~~~~~~~~~~~~d 491 (706)
. -......++||||++++++++++.. |+.++++++.+++..++...|... ........+.+++ ..|
T Consensus 413 ~--------~~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~d 482 (740)
T 4a5s_A 413 P--------ERCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFI-ILN 482 (740)
T ss_dssp T--------TTBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTEEEEEEECCHHHHHHHTTEECCEEEEEEE-EET
T ss_pred C--------CCCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCcEEEEeccChhhhhhhhhccCCccEEEEE-ccC
Confidence 0 0012346899999999999999886 889999999888877777655332 2233456778888 679
Q ss_pred CeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCCCcCCCC
Q 005240 492 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEG 570 (706)
Q Consensus 492 g~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g 570 (706)
|.++++++++|+++++.+ ++|+||++|||+... .+... +...+...|++ +||+|++++++|..++|
T Consensus 483 g~~l~~~~~~P~~~~~~~--~~P~vv~~HGg~~~~-----~~~~~------~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g 549 (740)
T 4a5s_A 483 ETKFWYQMILPPHFDKSK--KYPLLLDVYAGPCSQ-----KADTV------FRLNWATYLASTENIIVASFDGRGSGYQG 549 (740)
T ss_dssp TEEEEEEEEECTTCCTTS--CEEEEEECCCCTTCC-----CCCCC------CCCSHHHHHHHTTCCEEEEECCTTCSSSC
T ss_pred CeEEEEEEEeCCCCCCCC--CccEEEEECCCCccc-----ccccc------cCcCHHHHHHhcCCeEEEEEcCCCCCcCC
Confidence 999999999999987654 599999999987431 11111 12234556664 99999999998776555
Q ss_pred CCCCc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCCC-----
Q 005240 571 DKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT----- 642 (706)
Q Consensus 571 ~~~~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~~----- 642 (706)
..+.. ..+....++|+.+++++|.+++++|++||+|+|+||||++|++++.++|++|+|+++.+|+.++...
T Consensus 550 ~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~~~~ 629 (740)
T 4a5s_A 550 DKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYT 629 (740)
T ss_dssp HHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBHHHH
T ss_pred hhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhhHHH
Confidence 44322 1233456899999999999888899999999999999999999999999999999999998764310
Q ss_pred ------C-------------------------cc------------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCccc
Q 005240 643 ------P-------------------------FG------------FQAERFFDALKGHGALSRLVLLPFEHHVYAAREN 679 (706)
Q Consensus 643 ------~-------------------------~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~ 679 (706)
| .. -+..+++++|+..++++++++||+++|.+.....
T Consensus 630 ~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 709 (740)
T 4a5s_A 630 ERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTA 709 (740)
T ss_dssp HHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHH
T ss_pred HHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCcc
Confidence 1 00 0223899999999999999999999999966667
Q ss_pred HHHHHHHHHHHHHHHhccCC
Q 005240 680 VMHVIWETDRWLQKYCLSNT 699 (706)
Q Consensus 680 ~~~~~~~~~~f~~~~l~~~~ 699 (706)
..++++.+.+||+++|....
T Consensus 710 ~~~~~~~i~~fl~~~l~~~~ 729 (740)
T 4a5s_A 710 HQHIYTHMSHFIKQCFSLPA 729 (740)
T ss_dssp HHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHHHHcCCCC
Confidence 78999999999999997544
No 2
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.3e-47 Score=444.84 Aligned_cols=548 Identities=16% Similarity=0.178 Sum_probs=385.1
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCC-----------------------CcccceeeCCCCCeEEEEeeccccccccCCc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDG-----------------------AKINFVSWSPDGKRIAFSVRVDEEDNVSSCK 61 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~-----------------------~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~ 61 (706)
..|++.+++. |+.+++...... ..+..++|||||++|+|...
T Consensus 64 ~~i~~~d~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----------- 128 (741)
T 2ecf_A 64 LDLWSYDIGS----GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG----------- 128 (741)
T ss_dssp EEEEEEETTT----CCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-----------
T ss_pred cEEEEEECCC----CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-----------
Confidence 4789999977 888877643221 12678999999999999752
Q ss_pred eeEEEEEcCCC---ceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccc
Q 005240 62 LRVWIADAETG---EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (706)
Q Consensus 62 ~~l~~~d~~~g---~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (706)
.+||++|++++ +.++++..... +..+.|||||++|+|.+.
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~~-----~~~~~~SPDG~~la~~~~-------------------------------- 171 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEGF-----ATDAKLSPKGGFVSFIRG-------------------------------- 171 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSSC-----EEEEEECTTSSEEEEEET--------------------------------
T ss_pred CcEEEEECCCCCcceEEEcccCCcc-----cccccCCCCCCEEEEEeC--------------------------------
Confidence 68999999998 88888755433 678999999999999742
Q ss_pred hhccCCchhhhhhhhcccceEEEEccC-CCceecCCC-ce-----------------EeeeeeCCCCcEEEEEeeccCcc
Q 005240 139 DNLLKDEYDESLFDYYTTAQLVLGSLD-GTAKDFGTP-AV-----------------YTAVEPSPDQKYVLITSMHRPYS 199 (706)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~~l~-g~~~~lt~~-~~-----------------~~~~~~SpDG~~i~~~~~~~~~~ 199 (706)
.+||+++++ |+.++++.. .. ...++|||||++|+|.+......
T Consensus 172 ------------------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~ 233 (741)
T 2ecf_A 172 ------------------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPV 233 (741)
T ss_dssp ------------------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTS
T ss_pred ------------------CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCC
Confidence 479999994 577777654 11 36799999999999987653210
Q ss_pred cc---------------c--c---cccccceEEEEecCC-CeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEE
Q 005240 200 YK---------------V--P---CARFSQKVQVWTTDG-KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (706)
Q Consensus 200 ~~---------------~--~---~~~~~~~i~~~~~~~-~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~ 258 (706)
.. . + .......|++|++++ ++.+.+....... .....++| |||+. |+
T Consensus 234 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~----------~~~~~~~~-pDg~~-l~ 301 (741)
T 2ecf_A 234 PVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQD----------IYLARVNW-RDPQH-LS 301 (741)
T ss_dssp CEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSS----------EEEEEEEE-EETTE-EE
T ss_pred ceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcc----------eEEEEEEe-CCCCE-EE
Confidence 00 0 0 000123899999998 8776664331110 12347899 99998 77
Q ss_pred EEEeccCCCCccccCccceeeeecCCCCCCCCceEEeeccc-----ccccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-----RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-----~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
+....... ....|+++|+ ++++.+.+..... .+..+.|||||+ +++.+.. ++..+||.+++++
T Consensus 302 ~~~~~~~~-------~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~-~g~~~l~~~~~~~ 369 (741)
T 2ecf_A 302 FQRQSRDQ-------KKLDLVEVTL---ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSER-TGFQHLYRIDSKG 369 (741)
T ss_dssp EEEEETTS-------SEEEEEEEET---TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECT-TSSCEEEEECSSS
T ss_pred EEEecccC-------CeEEEEEEEC---CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecC-CCccEEEEEcCCC
Confidence 66432111 2236999998 6777777654322 346899999999 5555433 4567899999876
Q ss_pred CCCCceeeecCcccccccCCCCCce-EeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeec
Q 005240 334 KDVAPRVLFDRVFENVYSDPGSPMM-TRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWE 412 (706)
Q Consensus 334 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~ 412 (706)
. .+.++..... ...+ .|||||++|++..... + ....+||.++.+++..++|..
T Consensus 370 --~-~~~l~~~~~~-------v~~~~~~s~dg~~l~~~~~~~------------~----~~~~~l~~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 370 --K-AAALTHGNWS-------VDELLAVDEKAGLAYFRAGIE------------S----ARESQIYAVPLQGGQPQRLSK 423 (741)
T ss_dssp --C-EEESCCSSSC-------EEEEEEEETTTTEEEEEECSS------------C----TTCBEEEEEETTCCCCEECCC
T ss_pred --C-eeeeeecceE-------EEeEeEEeCCCCEEEEEEeCC------------C----CceEEEEEEEcCCCCeeeccc
Confidence 3 4555432211 1123 4899999998876321 0 113457777776554555643
Q ss_pred ccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCC-----CCCCC--CCCceEEE
Q 005240 413 SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPH-----PYPTL--ASLQKEMI 485 (706)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~-----~~~~~--~~~~~~~~ 485 (706)
.. ....++|||||++|+++.++...|++++++++.++..+.|+..+. .+... .....+.+
T Consensus 424 ~~-------------~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (741)
T 2ecf_A 424 AP-------------GMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHPYARYREAQRPVEFG 490 (741)
T ss_dssp SC-------------SEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTSTTHHHHTTCCCEEEE
T ss_pred CC-------------CceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccchhhhhccCCCcEEE
Confidence 21 123579999999999999999999999999987766666654322 11122 34578999
Q ss_pred EEEccCC-eEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCc-hHHHHHHHCCeEEEEcCC
Q 005240 486 KYQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP-TSSLIFLARRFAVLAGPS 563 (706)
Q Consensus 486 ~~~~~dg-~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~G~~v~~~~~ 563 (706)
++++.|| ..|+++++.|+++++++ ++|+||++||++... .+... +..... .+++.|+++||+|+.++.
T Consensus 491 ~~~~~~g~~~l~~~~~~P~~~~~~~--~~p~vv~~hG~~~~~-----~~~~~---~~~~~~~~~~~~l~~~G~~v~~~d~ 560 (741)
T 2ecf_A 491 TLTAADGKTPLNYSVIKPAGFDPAK--RYPVAVYVYGGPASQ-----TVTDS---WPGRGDHLFNQYLAQQGYVVFSLDN 560 (741)
T ss_dssp EEECTTSSCEEEEEEECCSSCCTTS--CEEEEEECCCSTTCC-----SCSSC---CCCSHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEcCCCCEEEEEEEEeCCCCCCCC--CcCEEEEEcCCCCcc-----ccccc---ccccchhHHHHHHHhCCCEEEEEec
Confidence 9999999 99999999999865443 589999999986421 00111 110000 367888999999999888
Q ss_pred CCcCCCCCCCC---chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCC
Q 005240 564 IPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 640 (706)
Q Consensus 564 ~~~~g~g~~~~---~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~ 640 (706)
+|..+.+..+. ...+....+.|+.+++++|.+++.+|++||+|+||||||++++.++.++|++|+|+++.+|+.++.
T Consensus 561 rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~ 640 (741)
T 2ecf_A 561 RGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWG 640 (741)
T ss_dssp TTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGG
T ss_pred CCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchh
Confidence 76544332211 112223458999999999999888999999999999999999999999999999999999987643
Q ss_pred CC-----------Ccc----------------------------------chHHHHHHHHHhCCCcEEEEEeCCCCccCC
Q 005240 641 LT-----------PFG----------------------------------FQAERFFDALKGHGALSRLVLLPFEHHVYA 675 (706)
Q Consensus 641 ~~-----------~~~----------------------------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 675 (706)
.. +.. .+.++++++|...++++++++||+++|.+.
T Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 720 (741)
T 2ecf_A 641 LYDSHYTERYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLS 720 (741)
T ss_dssp GSBHHHHHHHHCCTGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCC
T ss_pred hhccccchhhcCCcccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCC
Confidence 10 000 022389999999999999999999999987
Q ss_pred CcccHHHHHHHHHHHHHHHhc
Q 005240 676 ARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 676 ~~~~~~~~~~~~~~f~~~~l~ 696 (706)
.... .++++.+.+||+++|+
T Consensus 721 ~~~~-~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 721 GADA-LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp HHHH-HHHHHHHHHHHHHHHC
T ss_pred CCch-hHHHHHHHHHHHHhcC
Confidence 4322 7889999999999985
No 3
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=7.5e-47 Score=436.04 Aligned_cols=524 Identities=15% Similarity=0.132 Sum_probs=371.2
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..++|||| ++|+|+. + ..||++|+++++.++++..... +..+.|||||++|++...
T Consensus 83 ~v~~~~~spd-~~~~~~~---------~--~~i~~~d~~~~~~~~l~~~~~~-----~~~~~~SpdG~~la~~~~----- 140 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFT---------Q--GGLVGFDMLARKVTYLFDTNEE-----TASLDFSPVGDRVAYVRN----- 140 (706)
T ss_dssp CCEEEEETTT-TEEEEEE---------T--TEEEEEETTTTEEEEEECCTTC-----CTTCEECTTSSEEEEEET-----
T ss_pred CceeEEECCC-CeEEEEE---------C--CEEEEEECCCCceEEccCCccc-----ccCCcCCCCCCEEEEEEC-----
Confidence 4788999999 8898864 2 6899999999998888755433 678999999999998631
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-C-----CCceecCCC-ce--------
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D-----GTAKDFGTP-AV-------- 176 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~-----g~~~~lt~~-~~-------- 176 (706)
..|+++++ + |+.++++.. ..
T Consensus 141 ---------------------------------------------~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 175 (706)
T 2z3z_A 141 ---------------------------------------------HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAV 175 (706)
T ss_dssp ---------------------------------------------TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCC
T ss_pred ---------------------------------------------CeEEEEecCcccccCCCcEEeccCCCCCeEcccch
Confidence 57999998 6 777777655 22
Q ss_pred -------EeeeeeCCCCcEEEEEeeccCccccc---------------c-----cccccceEEEEecCCCeeEEcccCCC
Q 005240 177 -------YTAVEPSPDQKYVLITSMHRPYSYKV---------------P-----CARFSQKVQVWTTDGKLVRELCDLPP 229 (706)
Q Consensus 177 -------~~~~~~SpDG~~i~~~~~~~~~~~~~---------------~-----~~~~~~~i~~~~~~~~~~~~l~~~~~ 229 (706)
+..+.|||||++|++.+.+....... . .......|++||+++++.+.+.....
T Consensus 176 ~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 255 (706)
T 2z3z_A 176 HQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP 255 (706)
T ss_dssp GGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC
T ss_pred hhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC
Confidence 37899999999999987432100000 0 00113679999999888777654321
Q ss_pred CCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCC-CceEEeec-c-c---cccc
Q 005240 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-KPEILHKL-D-L---RFRS 303 (706)
Q Consensus 230 ~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~~~~l~~~-~-~---~~~~ 303 (706)
.. ..+..+.|||||+. |++... +... ....|+++|+ +++ +.+.+... . . ....
T Consensus 256 ~~----------~~~~~~~~spdg~~-l~~~~~-~~~~------~~~~v~~~d~---~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 256 KE----------KFLTNLSWSPDENI-LYVAEV-NRAQ------NECKVNAYDA---ETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp TT----------CEEEEEEECTTSSE-EEEEEE-CTTS------CEEEEEEEET---TTCCEEEEEEEEECSSCCCCCSC
T ss_pred Cc----------eeEeeEEEECCCCE-EEEEEe-CCCC------CeeEEEEEEC---CCCceeeEEEEccCCCeECccCC
Confidence 11 12347899999997 776532 1111 2236899998 666 55555432 1 1 1357
Q ss_pred ceecC--CCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCc-eEeccCCCEEEEeeeccCCcceE
Q 005240 304 VSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPM-MTRTSTGTNVIAKIKKENDEQIY 380 (706)
Q Consensus 304 ~~wsp--Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~ 380 (706)
+.|+| ||+.|+. +.. ++..+||.++.++ +..+.++..... ... +.|+|||++|++.....
T Consensus 315 ~~~sp~~dg~~l~~-~~~-~g~~~l~~~~~~~--~~~~~l~~~~~~-------v~~~~~~spdg~~l~~~~~~~------ 377 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQ-SRR-DGWNHLYLYDTTG--RLIRQVTKGEWE-------VTNFAGFDPKGTRLYFESTEA------ 377 (706)
T ss_dssp CEECTTCSSEEEEE-ECT-TSSCEEEEEETTS--CEEEECCCSSSC-------EEEEEEECTTSSEEEEEESSS------
T ss_pred ceeecCCCCEEEEE-Ecc-CCccEEEEEECCC--CEEEecCCCCeE-------EEeeeEEcCCCCEEEEEecCC------
Confidence 89999 9985544 333 3567899999766 344555432211 111 57899999998876321
Q ss_pred EEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECC
Q 005240 381 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 460 (706)
Q Consensus 381 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~ 460 (706)
+ .....||.+|+++++.+++.... ....++|||||++++++.++...|++++++|+.
T Consensus 378 ------~----~~~~~l~~~d~~~~~~~~l~~~~-------------~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 378 ------S----PLERHFYCIDIKGGKTKDLTPES-------------GMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp ------C----TTCBEEEEEETTCCCCEESCCSS-------------SEEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred ------C----CceEEEEEEEcCCCCceeccCCC-------------ceEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 0 12346889999888766665321 123579999999999999999999999999998
Q ss_pred CCceeEeecCCCCCCCCCCCceEEEEEEccCC-eEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCC
Q 005240 461 LKKSSQITNFPHPYPTLASLQKEMIKYQRKDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE 539 (706)
Q Consensus 461 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg-~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~ 539 (706)
+++...++..+ ++........+.+.+++.+| ..++++++.|+++++++ ++|+||++|||+... .+...|.
T Consensus 435 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~--~~p~iv~~HGg~~~~-----~~~~~~~- 505 (706)
T 2z3z_A 435 KGSHTLLEAKN-PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAK--KYPVIVYVYGGPHAQ-----LVTKTWR- 505 (706)
T ss_dssp SCEEEEEECC-------CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTS--CEEEEEECCCCTTCC-----CCCSCC--
T ss_pred CCeEeeccccc-hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCC--CccEEEEecCCCCce-----eeccccc-
Confidence 88744455432 33344456789999999999 99999999999876544 589999999987431 1111111
Q ss_pred cCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCC---chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHH
Q 005240 540 FSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT 616 (706)
Q Consensus 540 ~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a 616 (706)
.....+++.|+++||.|++++.+|..+.+..+. ...+....+.|+.+++++|.+++.+|++||+|+|+||||++|
T Consensus 506 --~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a 583 (706)
T 2z3z_A 506 --SSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMT 583 (706)
T ss_dssp -----CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHH
T ss_pred --cCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHH
Confidence 111125788899999999988876644433221 122344568999999999988888999999999999999999
Q ss_pred HHHHHhCCCceeEEEeccCCCCCCCC-----------Ccc----------------------------------chHHHH
Q 005240 617 AHLLAHAPHLFCCGIARSGSYNKTLT-----------PFG----------------------------------FQAERF 651 (706)
Q Consensus 617 ~~~~~~~p~~~~a~v~~~~~~d~~~~-----------~~~----------------------------------~~~~~~ 651 (706)
++++.++|++|+|+|+.+|+.++... |.. -+.+++
T Consensus 584 ~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~ 663 (706)
T 2z3z_A 584 TNLMLTHGDVFKVGVAGGPVIDWNRYAIMYGERYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLF 663 (706)
T ss_dssp HHHHHHSTTTEEEEEEESCCCCGGGSBHHHHHHHHCCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHH
T ss_pred HHHHHhCCCcEEEEEEcCCccchHHHHhhhhhhhcCCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHH
Confidence 99999999999999999998764310 100 022389
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHh
Q 005240 652 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 695 (706)
Q Consensus 652 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l 695 (706)
+++|...++++++++||+++|.+... ...++++.+.+||+++|
T Consensus 664 ~~~l~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 664 LDACVKARTYPDYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp HHHHHHHTCCCEEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCeEEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 99999989999999999999998755 67889999999999975
No 4
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=3.2e-47 Score=440.35 Aligned_cols=568 Identities=13% Similarity=0.045 Sum_probs=379.3
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCC--cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
+|++.++.. |+.+++....... .+..++|||||++|||...... ........+||++|+++++.++++.....
T Consensus 38 ~i~~~d~~~----g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~-~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 112 (723)
T 1xfd_A 38 TVRLWNVET----NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEP-IYQHSYTGYYVLSKIPHGDPQSLDPPEVS 112 (723)
T ss_dssp CEEEBCGGG----CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC-CSSSCCCSEEEEEESSSCCCEECCCTTCC
T ss_pred CEEEEECCC----CcEEEEeccccccccccceEEECCCCCEEEEEecCcc-ceeecceeeEEEEECCCCceEeccCCccc
Confidence 578888877 7777665322221 3788999999999999875211 01112347899999999998888654321
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
...+..+.|||||++|+|.+. .+||+++
T Consensus 113 --~~~~~~~~~SPdG~~la~~~~--------------------------------------------------~~i~~~~ 140 (723)
T 1xfd_A 113 --NAKLQYAGWGPKGQQLIFIFE--------------------------------------------------NNIYYCA 140 (723)
T ss_dssp --SCCCSBCCBCSSTTCEEEEET--------------------------------------------------TEEEEES
T ss_pred --cccccccEECCCCCEEEEEEC--------------------------------------------------CeEEEEE
Confidence 112567899999999999852 4799999
Q ss_pred c-CCCceecCCC--ce------------------EeeeeeCCCCcEEEEEeeccCcc--ccc-----------------c
Q 005240 164 L-DGTAKDFGTP--AV------------------YTAVEPSPDQKYVLITSMHRPYS--YKV-----------------P 203 (706)
Q Consensus 164 l-~g~~~~lt~~--~~------------------~~~~~~SpDG~~i~~~~~~~~~~--~~~-----------------~ 203 (706)
+ +|+.++++.. .. +..++|||||++|+|.+...... +.. +
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 9 4577776654 11 15799999999999988653210 000 0
Q ss_pred cc--cccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeee
Q 005240 204 CA--RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYT 280 (706)
Q Consensus 204 ~~--~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~ 280 (706)
.. .....|++|++.+++. +.+......... ......++|||||+. |++...... ....|++
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~SpDg~~-l~~~~~~~~--------~~~~i~~ 284 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR-------EYYITMVKWATSTKV-AVTWLNRAQ--------NVSILTL 284 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS-------SEEEEEEEESSSSEE-EEEEEETTS--------CEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCc-------cceeEEEEEeCCCeE-EEEEEcCCC--------CeEEEEE
Confidence 00 0124899999997763 555432110000 011346899999986 654433211 2235899
Q ss_pred ecCCCCCCCCceEEeec--cccc----ccceecCCCceEEEEeecccc----ceEEEEEc-CCCCCCC---ceeeecCcc
Q 005240 281 QPAEPAEGEKPEILHKL--DLRF----RSVSWCDDSLALVNETWYKTS----QTRTWLVC-PGSKDVA---PRVLFDRVF 346 (706)
Q Consensus 281 ~d~~~~~~~~~~~l~~~--~~~~----~~~~wspDg~~l~~~~~~~~~----~~~l~~~d-~~~~~~~---~~~l~~~~~ 346 (706)
+|+ ++++.+.+... ...+ ..+.|||||+.|++.+...++ ..+||++| .++ ++ .+.++....
T Consensus 285 ~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~~~~~l~~~~~ 359 (723)
T 1xfd_A 285 CDA---TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPN--SSNDNIQSITSGDW 359 (723)
T ss_dssp EET---TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCC--SSSCCCCBSCCSSS
T ss_pred EeC---CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCC--CCccceeEeecCCe
Confidence 998 67777666432 2222 389999999999987333333 56899999 455 23 455543221
Q ss_pred cccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCC-ceeeeecccchhhhhhhhhh
Q 005240 347 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG-SKERIWESNREKYFETAVAL 425 (706)
Q Consensus 347 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g-~~~~l~~~~~~~~~~~~~~~ 425 (706)
... ..+.|||||++|++..... .....+||.++..++ +.+.|...-. .
T Consensus 360 ~~~------~~~~~spdg~~l~~~~~~~----------------~~~~~~l~~~~~~~~~~~~~l~~~~~---------~ 408 (723)
T 1xfd_A 360 DVT------KILAYDEKGNKIYFLSTED----------------LPRRRQLYSANTVGNFNRQCLSCDLV---------E 408 (723)
T ss_dssp CEE------EEEEEETTTTEEEEEESSS----------------CTTCCEEEEECSSTTCCCBCSSTTSS---------S
T ss_pred EEE------eeeEEcCCCCEEEEEEcCC----------------CCcceEEEEEeCCCCCCcceeccccc---------C
Confidence 110 1157999999998876320 013446888887654 3334432100 0
Q ss_pred ccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCC----CCCCCCCceEEEEEEccCCeEEEEEEEe
Q 005240 426 VFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKDGVPLTATLYL 501 (706)
Q Consensus 426 ~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~----~~~~~~~~~~~~~~~~~dg~~i~~~l~~ 501 (706)
......++|||||++|++..++...|..++. +..+++...+...+.. +......+++.+++++.|| +++++++.
T Consensus 409 ~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~ 486 (723)
T 1xfd_A 409 NCTYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDKKKMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQILK 486 (723)
T ss_dssp SCCCCEEEECTTSSEEEEECCSSSSCCEEEE-ETTTCCEEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEEB
T ss_pred CCCeEEEEECCCCCEEEEEccCCCCCeEEEE-ECCCCCEEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEEe
Confidence 0123467999999999999999998886654 7655554333332211 1123344678888998899 99999999
Q ss_pred cCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCC---chhh
Q 005240 502 PPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---NDRF 578 (706)
Q Consensus 502 P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---~~~~ 578 (706)
|+++++++ ++|+||++||++... ..... +. .....+.|+++||+|+.++++|..++|..+. ...+
T Consensus 487 P~~~~~~~--~~p~vv~~HG~~~~~-----~~~~~---~~--~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~ 554 (723)
T 1xfd_A 487 PATFTDTT--HYPLLLVVDGTPGSQ-----SVAEK---FE--VSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRL 554 (723)
T ss_dssp CSSCCSSS--CEEEEEECCCCTTCC-----CCCCC---CC--CSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCT
T ss_pred CCCCCCCC--ccCEEEEEcCCCCcc-----ccCcc---cc--ccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhcc
Confidence 99876544 589999999987421 01111 11 1123456667999999999887655543221 1123
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC----CCceeEEEeccCCCCCCC-------------
Q 005240 579 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIARSGSYNKTL------------- 641 (706)
Q Consensus 579 ~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~----p~~~~a~v~~~~~~d~~~------------- 641 (706)
....+.|+.++++++.+++.+|++||+|+|+||||+++++++.++ |++|+|+++.+|+.++..
T Consensus 555 ~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 634 (723)
T 1xfd_A 555 GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLH 634 (723)
T ss_dssp TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHHHHHCCC
T ss_pred CcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhhhccHhhcCCc
Confidence 335688999999999888889999999999999999999999999 999999999999765321
Q ss_pred ---------------------CCcc------------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHH
Q 005240 642 ---------------------TPFG------------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETD 688 (706)
Q Consensus 642 ---------------------~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 688 (706)
.|.. -+..+++++|+..++++++++||+++|.+.......++++.++
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 714 (723)
T 1xfd_A 635 GLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSII 714 (723)
T ss_dssp SSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHH
T ss_pred cCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHH
Confidence 0110 0223899999999999999999999999865566788999999
Q ss_pred HHHHHHhc
Q 005240 689 RWLQKYCL 696 (706)
Q Consensus 689 ~f~~~~l~ 696 (706)
+||+++|+
T Consensus 715 ~fl~~~l~ 722 (723)
T 1xfd_A 715 NFFVECFR 722 (723)
T ss_dssp HHHTTTTC
T ss_pred HHHHHHhc
Confidence 99998874
No 5
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=1.7e-45 Score=421.50 Aligned_cols=537 Identities=15% Similarity=0.118 Sum_probs=382.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc----cccccceEEe--cCCcE-EEEE
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL----NAVFGSFVWV--NNSTL-LIFT 104 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~----~~~~~~~~wS--pDg~~-l~~~ 104 (706)
.+..|+|||| +++|+..++. .++...||++ ..+++.++++....... ..+-..+.|+ |||++ |+|.
T Consensus 25 ~~~~~~~s~~--~~~~~~~~~~----~~~~~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 25 RPACVGAVGD--EVWWVAPRPA----EAGRATLVRR-RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp CCEEEEEETT--EEEEEEEETT----TTTEEEEEEE-CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred ccceeEEcCC--eEEEEecCcc----cCCcEEEEEE-CCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 5788999954 7888876422 1456789988 56788899986553200 0001156787 99999 9987
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC----CCceecCC-----C-
Q 005240 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD----GTAKDFGT-----P- 174 (706)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~----g~~~~lt~-----~- 174 (706)
... ..+||+++++ ++.++|+. .
T Consensus 98 ~~~------------------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~~~~~~ 129 (662)
T 3azo_A 98 HFG------------------------------------------------DQRLYAFEPDAPGGAVPRPLTPVSAVGGG 129 (662)
T ss_dssp BTT------------------------------------------------TCCEEEECTTSTTCCCCEECSCCCCSTTC
T ss_pred ECC------------------------------------------------CCeEEEEcCCCCCCCCCEeccCCccCCCC
Confidence 431 1579999997 77888887 3
Q ss_pred ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC------CeeEEcc-cCCCCCCCCcccCccCCCCcce
Q 005240 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------KLVRELC-DLPPAEDIPVCYNSVREGMRSI 247 (706)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~l~-~~~~~~~~p~~~~~~~~g~~~~ 247 (706)
..+..++|||||++|+|.+...... . ......+|++|++++ ++.++|+ .... ....+
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~--~-~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~-------------~~~~~ 193 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGE--G-PSDVRRFLAAVPLDGSAAADRSAVRELSDDAHR-------------FVTGP 193 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSS--S-TTCEEEEEEEEETTSTTTTCGGGSEESSCSCSS-------------EECCC
T ss_pred ccccCcEECCCCCEEEEEEecccCC--C-CCCceeEEEEEECCCCccccCCceeEEEecCCC-------------cccCc
Confidence 4677899999999999988652100 0 000125899999998 7788877 4321 12356
Q ss_pred eeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCC-CC---CceEEeec-ccccccceecCCCceEEEEeecccc
Q 005240 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GE---KPEILHKL-DLRFRSVSWCDDSLALVNETWYKTS 322 (706)
Q Consensus 248 ~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~---~~~~l~~~-~~~~~~~~wspDg~~l~~~~~~~~~ 322 (706)
+|||||+. |++........ .+....|+++|+ + ++ +.++|+.. ...+..+.|||||+ |++.++.. +
T Consensus 194 ~~SpDG~~-la~~~~~~~~~----~~~~~~i~~~d~---~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~-~ 263 (662)
T 3azo_A 194 RLSPDGRQ-AVWLAWDHPRM----PWEGTELKTARV---TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT-G 263 (662)
T ss_dssp EECTTSSE-EEEEEECTTCC----TTTCEEEEEEEE---CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT-S
T ss_pred eECCCCCE-EEEEECCCCCC----CCCCcEEEEEEE---CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCC-C
Confidence 89999998 88775432211 112346999999 5 45 56667654 57788999999999 77766443 4
Q ss_pred ceEEEEEcCCCCCCCceeeecCccc--ccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeee
Q 005240 323 QTRTWLVCPGSKDVAPRVLFDRVFE--NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLF 400 (706)
Q Consensus 323 ~~~l~~~d~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~ 400 (706)
..+||++|++++ +.+.++..... ...-.++...+.++++|+.++... + ....||.+
T Consensus 264 ~~~l~~~~~~~~--~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~l~~~ 321 (662)
T 3azo_A 264 WWNLHRVDPATG--AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG-------------------K-GAAVLGIL 321 (662)
T ss_dssp SCEEEEECTTTC--CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB-------------------S-SSCEEEEE
T ss_pred CeEEEEEECCCC--ceeecccccccccCccccccCceEeEeCCCEEEEEEE-------------------c-CccEEEEE
Confidence 568999999773 45555443211 111112223345556665433321 1 23468889
Q ss_pred ecCCCceeeeecccchhhhhhhhhhccCCCceec-ccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCCC-CCCC
Q 005240 401 DINTGSKERIWESNREKYFETAVALVFGQGEEDI-NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY-PTLA 478 (706)
Q Consensus 401 d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~~-~~~~ 478 (706)
|+++++.++|...... ...+ ++|++.++++.++...|.+||++|+.+++.++|+..+... ....
T Consensus 322 d~~~~~~~~l~~~~~~--------------~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~ 387 (662)
T 3azo_A 322 DPESGELVDAAGPWTE--------------WAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAY 387 (662)
T ss_dssp ETTTTEEEECCSSCCE--------------EEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGG
T ss_pred ECCCCcEEEecCCCCe--------------EEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccc
Confidence 9988877666433211 1234 8899999999999999999999999999999998765432 3334
Q ss_pred CCceEEEEEEccCCeEEEEEEEecCCCC--CCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCe
Q 005240 479 SLQKEMIKYQRKDGVPLTATLYLPPGYD--QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (706)
Q Consensus 479 ~~~~~~~~~~~~dg~~i~~~l~~P~~~~--~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 556 (706)
...++.+.+++.+|..++++++.|++++ ....+++|+||++||++... ........++.|+++||
T Consensus 388 ~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~-------------~~~~~~~~~~~l~~~G~ 454 (662)
T 3azo_A 388 YPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSR-------------VPAVLDLDVAYFTSRGI 454 (662)
T ss_dssp SCCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSC-------------CCCSCCHHHHHHHTTTC
T ss_pred cCcceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCcc-------------CcccchHHHHHHHhCCC
Confidence 4568999999989999999999999864 00123589999999986421 00112246788899999
Q ss_pred EEEEcCCCCcCCCCCCCCc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEec
Q 005240 557 AVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 633 (706)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 633 (706)
+|+.++++|+.|+|+++.. ..+....++|+.+++++|++++.+|++||+|+|+||||+++++++.+ |++|+|+++.
T Consensus 455 ~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~ 533 (662)
T 3azo_A 455 GVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVL 533 (662)
T ss_dssp EEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEE
T ss_pred EEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEec
Confidence 9999999998888876532 23334568999999999999988999999999999999999999987 8999999999
Q ss_pred cCCCCCCC-------------------------------CCcc----------------------chHHHHHHHHHhCCC
Q 005240 634 SGSYNKTL-------------------------------TPFG----------------------FQAERFFDALKGHGA 660 (706)
Q Consensus 634 ~~~~d~~~-------------------------------~~~~----------------------~~~~~~~~~l~~~~~ 660 (706)
+|+.++.. .|.. .+.++++++|+..++
T Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~ 613 (662)
T 3azo_A 534 YPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGV 613 (662)
T ss_dssp SCCCCHHHHHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCC
T ss_pred CCccCHHHHhcccccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCC
Confidence 99865210 0000 023389999999999
Q ss_pred cEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhccCC
Q 005240 661 LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 699 (706)
Q Consensus 661 ~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~~~ 699 (706)
++++++||+++|.+.......+.++.+++||+++|+..+
T Consensus 614 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~~ 652 (662)
T 3azo_A 614 PHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVEV 652 (662)
T ss_dssp CEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999987666778999999999999997543
No 6
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-46 Score=431.47 Aligned_cols=562 Identities=14% Similarity=0.072 Sum_probs=379.9
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCC--CcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCce---eeccc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDG--AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA---KPLFE 79 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~---~~lt~ 79 (706)
.+|++.+++. |+.+++...... ..+..++|||||++|||.....+.. .-+....||++|+++++. ++++
T Consensus 36 ~~i~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~-~~s~~~~i~~~d~~~g~~~~~~~l~- 109 (719)
T 1z68_A 36 NNIVLYNIET----GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLW-RYSYTATYYIYDLSNGEFVRGNELP- 109 (719)
T ss_dssp SCEEEEESSS----CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECS-SSCEEEEEEEEETTTTEECCSSCCC-
T ss_pred CCEEEEEcCC----CcEEEEEccccccccceeeEEECCCCCeEEEEecCceeE-EeecceEEEEEECCCCccccceecC-
Confidence 3688999977 888887632111 1278899999999999987521000 001247899999999988 6663
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceE
Q 005240 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (706)
Q Consensus 80 ~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 159 (706)
. .+..+.|||||++|+|... ..|
T Consensus 110 --~-----~~~~~~~SPDG~~la~~~~--------------------------------------------------~~i 132 (719)
T 1z68_A 110 --R-----PIQYLCWSPVGSKLAYVYQ--------------------------------------------------NNI 132 (719)
T ss_dssp --S-----SBCCEEECSSTTCEEEEET--------------------------------------------------TEE
T ss_pred --c-----ccccceECCCCCEEEEEEC--------------------------------------------------CeE
Confidence 2 2678999999999999742 579
Q ss_pred EEEcc-CCCceecCCCc--e-E-----------------eeeeeCCCCcEEEEEeeccCcc--ccc--------------
Q 005240 160 VLGSL-DGTAKDFGTPA--V-Y-----------------TAVEPSPDQKYVLITSMHRPYS--YKV-------------- 202 (706)
Q Consensus 160 ~~~~l-~g~~~~lt~~~--~-~-----------------~~~~~SpDG~~i~~~~~~~~~~--~~~-------------- 202 (706)
+++++ +|+.++++..+ . + ..++|||||++|+|.+.+.... +..
T Consensus 133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 212 (719)
T 1z68_A 133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINI 212 (719)
T ss_dssp EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEE
T ss_pred EEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceee
Confidence 99999 55777776431 1 1 4799999999999987653210 000
Q ss_pred --c---cccccceEEEEecCCCeeE---EcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCc
Q 005240 203 --P---CARFSQKVQVWTTDGKLVR---ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSP 274 (706)
Q Consensus 203 --~---~~~~~~~i~~~~~~~~~~~---~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~ 274 (706)
+ ......+|++||+++++.. ++.... .+.........++||||++ +++.... ... .
T Consensus 213 ~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~SpD~~--~~~~~~~-~~~------~ 276 (719)
T 1z68_A 213 PYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA-------MIASSDYYFSWLTWVTDER--VCLQWLK-RVQ------N 276 (719)
T ss_dssp ECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH-------HHHTSCEEEEEEEESSSSE--EEEEEEE-SST------T
T ss_pred cCCCCCCCCCeeEEEEEECCCCCccceeEccCCc-------cCCCCcceEEEeEEeCCCe--EEEEEec-ccc------C
Confidence 0 0001248999999977642 332100 0000001134779999965 5444211 111 1
Q ss_pred cceeeeec----CCCCCCCCceEEee-----cccccc-----cceecCCCceEEEEeeccccceEEEEEcCCCCCCCcee
Q 005240 275 RDIIYTQP----AEPAEGEKPEILHK-----LDLRFR-----SVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (706)
Q Consensus 275 ~~~l~~~d----~~~~~~~~~~~l~~-----~~~~~~-----~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 340 (706)
...|+++| + ++++.+.++. ....+. .+.|||||+.|++.....++..+||++|++++ +.+.
T Consensus 277 ~~~l~~~d~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~~ 351 (719)
T 1z68_A 277 VSVLSICDFREDW---QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAIQ 351 (719)
T ss_dssp EEEEEEEEECSSS---SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCEE
T ss_pred eEEEEEEcccCCC---CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC--ceEe
Confidence 23588998 6 5666655542 234444 78999999998886555557789999999884 4566
Q ss_pred eecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCc--eeeeecccchhh
Q 005240 341 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS--KERIWESNREKY 418 (706)
Q Consensus 341 l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~ 418 (706)
|+..... ...+.++ ||+.|++..... .......+||.+++++|. .+.|...-
T Consensus 352 lt~~~~~-------v~~~~~~-d~~~i~~~~~~~--------------~~~~~~~~l~~~~~~~g~~~~~~l~~~~---- 405 (719)
T 1z68_A 352 ITSGKWE-------AINIFRV-TQDSLFYSSNEF--------------EEYPGRRNIYRISIGSYPPSKKCVTCHL---- 405 (719)
T ss_dssp CSCSSSC-------EEEEEEE-CSSEEEEEESCG--------------GGCTTCBEEEEEECSSSSCCEEESSTTT----
T ss_pred cccCceE-------EEEEEEE-eCCEEEEEEecC--------------CCCCceEEEEEEeCCCCCCCceeccCcc----
Confidence 6543211 1123445 888888876320 000233468888886663 34443210
Q ss_pred hhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCC----CCCCCCCceEEEEEEccCCeE
Q 005240 419 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP----YPTLASLQKEMIKYQRKDGVP 494 (706)
Q Consensus 419 ~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~----~~~~~~~~~~~~~~~~~dg~~ 494 (706)
.........++||+|++++++++++...| .++++|+++++..+++..|.. +.......++.+++++.| .+
T Consensus 406 ----~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 479 (719)
T 1z68_A 406 ----RKERCQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKKLEVDE-IT 479 (719)
T ss_dssp ----TTTTBCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EE
T ss_pred ----CCCCCceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEEEecCC-eE
Confidence 00001223578999999999998888777 689999988987777776543 223344578999999877 99
Q ss_pred EEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHH-HCCeEEEEcCCCCcCCCCCCC
Q 005240 495 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKL 573 (706)
Q Consensus 495 i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~ 573 (706)
++++++.|+++++++ ++|+||++||++... .... . +...+...|+ ++||+|+.++.+|..+++..+
T Consensus 480 l~~~~~~P~~~~~~~--~~p~vl~~hG~~~~~-----~~~~---~---~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~ 546 (719)
T 1z68_A 480 LWYKMILPPQFDRSK--KYPLLIQVYGGPCSQ-----SVRS---V---FAVNWISYLASKEGMVIALVDGRGTAFQGDKL 546 (719)
T ss_dssp EEEEEEECTTCCSSS--CEEEEEEECCCTTBC-----CCCC---C---CCCCHHHHHHHTTCCEEEEEECTTBSSSCHHH
T ss_pred EEEEEEeCCCCCCCC--CccEEEEECCCCCcC-----cccc---c---chhhHHHHHHhcCCeEEEEEcCCCCCCCchhh
Confidence 999999999876543 589999999986421 0011 1 1123455554 699999998888765544332
Q ss_pred Cc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCCC--------
Q 005240 574 PN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT-------- 642 (706)
Q Consensus 574 ~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~~-------- 642 (706)
.. ..+....+.|+.++++++.+++.+|++||+|+|+||||++|++++.++|++|+|+|+.+|+.++...
T Consensus 547 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~ 626 (719)
T 1z68_A 547 LYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERF 626 (719)
T ss_dssp HGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBHHHHHHH
T ss_pred HHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhccccchhh
Confidence 11 1233467899999999999988899999999999999999999999999999999999998764310
Q ss_pred ----------------------------Ccc------------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHH
Q 005240 643 ----------------------------PFG------------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMH 682 (706)
Q Consensus 643 ----------------------------~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 682 (706)
|.. -+..+++++|+..++++++++||+++|.+ ......+
T Consensus 627 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~~~~ 705 (719)
T 1z68_A 627 MGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLSTNH 705 (719)
T ss_dssp HCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHHHHH
T ss_pred cCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCC-CcccHHH
Confidence 100 02238999999999999999999999998 3445788
Q ss_pred HHHHHHHHHHHHhc
Q 005240 683 VIWETDRWLQKYCL 696 (706)
Q Consensus 683 ~~~~~~~f~~~~l~ 696 (706)
+++.+.+||+++|+
T Consensus 706 ~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 706 LYTHMTHFLKQCFS 719 (719)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999999873
No 7
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=1.8e-46 Score=422.65 Aligned_cols=503 Identities=15% Similarity=0.111 Sum_probs=361.7
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..+++||||++|||++.+ ++..+||.+ ++++.+++|..... .+..+.|||| + ++|.+......
T Consensus 23 ~~~~~~~~~DG~~la~~s~~-------~g~~~lw~~--~~g~~~~lt~~~~~----~~~~~~~spd-~-~l~~~~~~~g~ 87 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFS-------EGSVNAYLY--DGGETVKLNREPIN----SVLDPHYGVG-R-VILVRDVSKGA 87 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEE-------TTEEEEEEE--ETTEEEECCSSCCS----EECEECTTCS-E-EEEEEECSTTS
T ss_pred chheeecCCCCCeEEEEEcc-------CCceeEEEE--cCCCcEeeeccccc----ccccccCCCC-e-EEEEeccCCCC
Confidence 37788999999999998753 566788886 68999999876532 2678999999 5 55654321111
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc--CCCceecCCCceEeeeeeCCCCcEE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL--DGTAKDFGTPAVYTAVEPSPDQKYV 189 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l--~g~~~~lt~~~~~~~~~~SpDG~~i 189 (706)
...+||.+++ +|...+++.......++|||||+.+
T Consensus 88 -------------------------------------------~~~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~ 124 (582)
T 3o4h_A 88 -------------------------------------------EQHALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAV 124 (582)
T ss_dssp -------------------------------------------CCEEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCE
T ss_pred -------------------------------------------cceEEEEEeccCCCccccccCCCCceeeeeCCCCCeE
Confidence 1258999999 7765577666444467999999999
Q ss_pred EEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCc
Q 005240 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (706)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~ 269 (706)
+|.+.... .+.+|++++++.++++.... ..++|||||+. |++.....+.
T Consensus 125 ~~~s~~~~------------~~~l~d~~~g~~~~l~~~~~---------------~~~~~spDG~~-la~~~~~~~~--- 173 (582)
T 3o4h_A 125 VFTGATED------------RVALYALDGGGLRELARLPG---------------FGFVSDIRGDL-IAGLGFFGGG--- 173 (582)
T ss_dssp EEEEECSS------------CEEEEEEETTEEEEEEEESS---------------CEEEEEEETTE-EEEEEEEETT---
T ss_pred EEEecCCC------------CceEEEccCCcEEEeecCCC---------------ceEEECCCCCE-EEEEEEcCCC---
Confidence 88876532 45588999988888876532 36799999998 7766533221
Q ss_pred cccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCc--cc
Q 005240 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV--FE 347 (706)
Q Consensus 270 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~--~~ 347 (706)
...||++|+ ++++.++|+.....+..++|||||+.|+ .+ ..++..+||++|++++ +.+.+.... +.
T Consensus 174 -----~~~i~~~d~---~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~-~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~ 241 (582)
T 3o4h_A 174 -----RVSLFTSNL---SSGGLRVFDSGEGSFSSASISPGMKVTA-GL-ETAREARLVTVDPRDG--SVEDLELPSKDFS 241 (582)
T ss_dssp -----EEEEEEEET---TTCCCEEECCSSCEEEEEEECTTSCEEE-EE-ECSSCEEEEEECTTTC--CEEECCCSCSHHH
T ss_pred -----CeEEEEEcC---CCCCceEeecCCCccccceECCCCCEEE-Ec-cCCCeeEEEEEcCCCC--cEEEccCCCcChh
Confidence 124999998 7889999988878889999999999998 33 3335568999999985 344332211 11
Q ss_pred ccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhcc
Q 005240 348 NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF 427 (706)
Q Consensus 348 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 427 (706)
.+. ..+.....||||| .+++....+ + ...||.+ |+..+... +
T Consensus 242 ~~~-~~~~~~~~~spdg-~~~~~~~~~---g---------------~~~l~~~----g~~~~~~~--~------------ 283 (582)
T 3o4h_A 242 SYR-PTAITWLGYLPDG-RLAVVARRE---G---------------RSAVFID----GERVEAPQ--G------------ 283 (582)
T ss_dssp HHC-CSEEEEEEECTTS-CEEEEEEET---T---------------EEEEEET----TEEECCCS--S------------
T ss_pred hhh-hccccceeEcCCC-cEEEEEEcC---C---------------cEEEEEE----CCeeccCC--C------------
Confidence 100 0000112289999 666665331 1 1123333 44332111 1
Q ss_pred CCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCCCCCCCCCceEEEEEEccCCeEEEEEEEecCCCCC
Q 005240 428 GQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQ 507 (706)
Q Consensus 428 ~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~ 507 (706)
....++|| |++ ++++.++...|+++|++++.+ +.++| .++ +.+.......+.+++++.+|.+++++++.|+++++
T Consensus 284 ~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~-~~~~l-~~~-~~~~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~ 358 (582)
T 3o4h_A 284 NHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE-PLLEG-GLP-EDLRRSIAGSRLVWVESFDGSRVPTYVLESGRAPT 358 (582)
T ss_dssp EEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCC-EEECC-CCC-HHHHHTEEEEEEEEEECTTSCEEEEEEEEETTSCS
T ss_pred ceEEEEec-CCE-EEEEEcCCCCCCeEEEEcCCC-ceEEE-ecC-CccccccCcceEEEEECCCCCEEEEEEEcCCCCCC
Confidence 11246888 774 667888899999999999765 55555 111 00113446789999999999999999999997543
Q ss_pred CCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc---hhhHHHHHH
Q 005240 508 SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVS 584 (706)
Q Consensus 508 ~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~ 584 (706)
++|+||++||++... . .......++.|+++||+|+.++++|+.|+|+++.. ..+....++
T Consensus 359 ----~~p~vv~~HG~~~~~--------~-----~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~ 421 (582)
T 3o4h_A 359 ----PGPTVVLVHGGPFAE--------D-----SDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELE 421 (582)
T ss_dssp ----SEEEEEEECSSSSCC--------C-----CSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHH
T ss_pred ----CCcEEEEECCCcccc--------c-----ccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcccccHH
Confidence 489999999986431 0 11123567889999999999999988778766432 234456689
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC-----------------------
Q 005240 585 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL----------------------- 641 (706)
Q Consensus 585 D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~----------------------- 641 (706)
|+.++++++.+++.+| ||+|+||||||++|++++.++|++|+|+++.+|+.++..
T Consensus 422 d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (582)
T 3o4h_A 422 DVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREI 499 (582)
T ss_dssp HHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHHHHHHcCcCHHH
Confidence 9999999999998887 999999999999999999999999999999999876321
Q ss_pred --------------CCcc------------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHh
Q 005240 642 --------------TPFG------------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 695 (706)
Q Consensus 642 --------------~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l 695 (706)
.|.. .+.++++++|+..++++++++||+++|.+.......++++.+++||+++|
T Consensus 500 ~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l 579 (582)
T 3o4h_A 500 MRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQR 579 (582)
T ss_dssp HHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHc
Confidence 0100 02349999999999999999999999999866678899999999999998
Q ss_pred cc
Q 005240 696 LS 697 (706)
Q Consensus 696 ~~ 697 (706)
+.
T Consensus 580 ~~ 581 (582)
T 3o4h_A 580 ER 581 (582)
T ss_dssp TC
T ss_pred CC
Confidence 63
No 8
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=1.7e-44 Score=414.51 Aligned_cols=539 Identities=14% Similarity=0.067 Sum_probs=368.9
Q ss_pred eeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc--cccccccceEEecCCcEEEEEecCCCCCCCC
Q 005240 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI--CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPK 114 (706)
Q Consensus 37 ~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~--~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~ 114 (706)
..+|||++++|.++.. ......||+++..+++.++|+..... .....+..+.|||||++|+|.....+..
T Consensus 74 ~p~~dG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~--- 145 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHK-----DKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAAD--- 145 (695)
T ss_dssp CCEEETTEEEEEEECT-----TCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCS---
T ss_pred CCEEECCEEEEEEEcC-----CCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCc---
Confidence 4459999999998631 12357899999988888888753210 0011266889999999999986532221
Q ss_pred CCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC-CCce---ecCCCceEeeeeeCCCCcEEE
Q 005240 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GTAK---DFGTPAVYTAVEPSPDQKYVL 190 (706)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~-g~~~---~lt~~~~~~~~~~SpDG~~i~ 190 (706)
..+|+++|++ |+.. .+.. .....++|||||+.|+
T Consensus 146 -----------------------------------------~~~i~v~dl~tg~~~~~~~~~~-~~~~~~~wspDg~~l~ 183 (695)
T 2bkl_A 146 -----------------------------------------EAVLHVIDVDSGEWSKVDVIEG-GKYATPKWTPDSKGFY 183 (695)
T ss_dssp -----------------------------------------CCEEEEEETTTCCBCSSCCBSC-CTTCCCEECTTSSEEE
T ss_pred -----------------------------------------eEEEEEEECCCCCCcCCcccCc-ccccceEEecCCCEEE
Confidence 2689999994 5544 2221 1126899999999999
Q ss_pred EEeeccCcccccccccccceEEEEecCCCee--EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCC
Q 005240 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (706)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~ 268 (706)
|++.+..............+|++|++.++.. +.+....... .....+.|||||+. |++......
T Consensus 184 ~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~----------~~~~~~~~SpDG~~-l~~~~~~~~--- 249 (695)
T 2bkl_A 184 YEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP----------TTFLQSDLSRDGKY-LFVYILRGW--- 249 (695)
T ss_dssp EEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT----------TCEEEEEECTTSCC-EEEEEEETT---
T ss_pred EEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC----------EEEEEEEECCCCCE-EEEEEeCCC---
Confidence 9987542100000111246799999987652 3343332110 11236789999998 776653321
Q ss_pred ccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCC-CceeeecCccc
Q 005240 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFDRVFE 347 (706)
Q Consensus 269 ~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~-~~~~l~~~~~~ 347 (706)
....||+++. .+++.+.|+........+.| +||. |++.++......+|+++|+++++. ..+.++...-.
T Consensus 250 -----~~~~l~~~~~---~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 319 (695)
T 2bkl_A 250 -----SENDVYWKRP---GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS 319 (695)
T ss_dssp -----TEEEEEEECT---TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS
T ss_pred -----CceEEEEEcC---CCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC
Confidence 1235888877 56788888876666667777 7888 877765444567899999987531 12444322100
Q ss_pred ccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhcc
Q 005240 348 NVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVF 427 (706)
Q Consensus 348 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 427 (706)
.. ...+.++ +..+++.... .....|+.++++++..+.+......
T Consensus 320 ~~-----l~~~~~~--~~~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~----------- 363 (695)
T 2bkl_A 320 AS-----LLSVSIV--GGHLSLEYLK------------------DATSEVRVATLKGKPVRTVQLPGVG----------- 363 (695)
T ss_dssp CE-----EEEEEEE--TTEEEEEEEE------------------TTEEEEEEEETTCCEEEECCCSSSS-----------
T ss_pred Ce-----EEEEEEE--CCEEEEEEEE------------------CCEEEEEEEeCCCCeeEEecCCCCe-----------
Confidence 00 0113444 4455555432 1223577777754434444211110
Q ss_pred CCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCCCCCCCCCceEEEEEEccCCeEEEEEEEecCCCCC
Q 005240 428 GQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQ 507 (706)
Q Consensus 428 ~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~ 507 (706)
....+++++|++.+++++++...|+.||++|+.+++.+.|+..+..+ ....+..+.+.+++.||..|+++++.|++++.
T Consensus 364 ~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~~-~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~ 442 (695)
T 2bkl_A 364 AASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVPM-NPEQYQVEQVFYASKDGTKVPMFVVHRKDLKR 442 (695)
T ss_dssp EECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCSS-CGGGEEEEEEEEECTTSCEEEEEEEEETTCCC
T ss_pred EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCCC-CHHHCeEEEEEEECCCCCEEEEEEEECCCCCC
Confidence 01245788999999999999999999999999999988888755432 22346889999999999999999999998654
Q ss_pred CCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc---hhhHHHHHH
Q 005240 508 SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVS 584 (706)
Q Consensus 508 ~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~ 584 (706)
. ++.|+||++|||+... . . ..+ ....+.|+++||+|+.++.+|+.++|..+.. ..+....+.
T Consensus 443 ~--~~~p~vl~~hGg~~~~------~--~-~~~----~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~ 507 (695)
T 2bkl_A 443 D--GNAPTLLYGYGGFNVN------M--E-ANF----RSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFD 507 (695)
T ss_dssp S--SCCCEEEECCCCTTCC------C--C-CCC----CGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHH
T ss_pred C--CCccEEEEECCCCccc------c--C-CCc----CHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHH
Confidence 3 3589999999986432 0 0 111 1234568899999999999988777765432 234456789
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCCC----------------------
Q 005240 585 SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---------------------- 642 (706)
Q Consensus 585 D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~~---------------------- 642 (706)
|+.+++++|++++++|++||+|+|+||||+++++++.++|++|+|+|+.+|+.++...
T Consensus 508 D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~ 587 (695)
T 2bkl_A 508 DFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKPEDF 587 (695)
T ss_dssp HHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHH
T ss_pred HHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcchHHHhCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999998774310
Q ss_pred -------------------Ccc------------chHHHHHHHHHh---CCCcEEEEEeCCCCccCCCc-ccHHHHHHHH
Q 005240 643 -------------------PFG------------FQAERFFDALKG---HGALSRLVLLPFEHHVYAAR-ENVMHVIWET 687 (706)
Q Consensus 643 -------------------~~~------------~~~~~~~~~l~~---~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~ 687 (706)
|.. .+..+|+++|+. .+.+++++++|+++|.+... ....+.+..+
T Consensus 588 ~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 667 (695)
T 2bkl_A 588 KTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDL 667 (695)
T ss_dssp HHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHH
T ss_pred HHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHH
Confidence 000 022389999998 68899999999999998653 3467788899
Q ss_pred HHHHHHHhccCCCC
Q 005240 688 DRWLQKYCLSNTSD 701 (706)
Q Consensus 688 ~~f~~~~l~~~~~~ 701 (706)
++||.++|.....+
T Consensus 668 ~~fl~~~l~~~~~~ 681 (695)
T 2bkl_A 668 YSFLFQVLDVQGAQ 681 (695)
T ss_dssp HHHHHHHTTC----
T ss_pred HHHHHHHcCCCCCC
Confidence 99999999765443
No 9
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=7.1e-44 Score=410.57 Aligned_cols=541 Identities=13% Similarity=0.083 Sum_probs=368.0
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCC--ccccccccceEEecCCcEEEEEecCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD--ICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~--~~~~~~~~~~~wSpDg~~l~~~~~~~~~ 110 (706)
...| +|||++++|..+.. ......||+++..+++.+.|+.... ......+..+.|||||++|+|.+...+.
T Consensus 76 ~~~p--~~dG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~ 148 (710)
T 2xdw_A 76 YSCH--FKKGKRYFYFYNTG-----LQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGS 148 (710)
T ss_dssp ECCC--EEETTEEEEEEECS-----SCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTC
T ss_pred CCCC--EEECCEEEEEEEcC-----CceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCC
Confidence 4445 49999999998631 1234589999988887775543211 0001125688999999999998653222
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCC-ceEeeeeeCCCCcE
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKY 188 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~-~~~~~~~~SpDG~~ 188 (706)
. ..+|+++|+ +|+..+++.. ..+..++|||||+.
T Consensus 149 ~--------------------------------------------~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~ 184 (710)
T 2xdw_A 149 D--------------------------------------------WVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKG 184 (710)
T ss_dssp S--------------------------------------------CEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSE
T ss_pred c--------------------------------------------eEEEEEEECCCCCCCcccccCcccceEEEEeCCCE
Confidence 1 158999999 5566554433 23567999999999
Q ss_pred EEEEeeccCcc---cccccccccceEEEEecCCCee--EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEec
Q 005240 189 VLITSMHRPYS---YKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (706)
Q Consensus 189 i~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~ 263 (706)
|+|++...... ..........+|+++++.++.. +.+...... + .....+.|||||+. |++....
T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~---~-------~~~~~~~~SpDg~~-l~~~~~~ 253 (710)
T 2xdw_A 185 MFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE---P-------KWMGGAELSDDGRY-VLLSIRE 253 (710)
T ss_dssp EEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC---T-------TCEEEEEECTTSCE-EEEEEEC
T ss_pred EEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC---C-------eEEEEEEEcCCCCE-EEEEEEc
Confidence 99998764310 0000112246799999986642 233222111 0 11226789999998 7766532
Q ss_pred cCCCCccccCccceeeeecCCCCCC------C--CceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCC
Q 005240 264 DRGDANVEVSPRDIIYTQPAEPAEG------E--KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (706)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~d~~~~~~------~--~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~ 335 (706)
... ....||++|+ ++ + +.+.|+....... ..|+|||+.|++.++......+|+++|+++++
T Consensus 254 ~~~-------~~~~l~~~d~---~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 254 GCD-------PVNRLWYCDL---QQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp SSS-------SCCEEEEEEG---GGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred cCC-------CccEEEEEEC---cccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 211 1236899998 44 3 4667765443333 35999999999987655557789999998853
Q ss_pred C-CceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCce-eeeecc
Q 005240 336 V-APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSK-ERIWES 413 (706)
Q Consensus 336 ~-~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~-~~l~~~ 413 (706)
. ..+.++...-... ...+.|++ +.++++.... .....|+.+++.+|+. ++|...
T Consensus 323 ~~~~~~l~~~~~~~~-----~~~~~~~~-~~~lv~~~~~------------------~g~~~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 323 ESKWKVLVPEHEKDV-----LEWVACVR-SNFLVLCYLH------------------DVKNTLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp GGGCEEEECCCSSCE-----EEEEEEET-TTEEEEEEEE------------------TTEEEEEEEETTTCCEEEEECCC
T ss_pred cccceeccCCCCCCe-----EEEEEEEc-CCEEEEEEEE------------------CCEEEEEEEECCCCCEEEecCCC
Confidence 1 2244433211000 01245664 4455555432 1223577888866763 344222
Q ss_pred cchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCc--eeEeecCCCCCCCCCCCceEEEEEEccC
Q 005240 414 NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK--SSQITNFPHPYPTLASLQKEMIKYQRKD 491 (706)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~~~~~~~d 491 (706)
.+ ....++++||++.+++++++..+|+.+|++|+.+++ .+.+...+........+..+.+.+++.|
T Consensus 379 ~~------------~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d 446 (710)
T 2xdw_A 379 VG------------SVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKD 446 (710)
T ss_dssp SS------------EEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEECTT
T ss_pred Cc------------eEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEEEEcCC
Confidence 11 112357889999999999999999999999999988 6667654322112334688999999999
Q ss_pred CeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCCCcCCCC
Q 005240 492 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEG 570 (706)
Q Consensus 492 g~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g 570 (706)
|..|+++++.|+++... ++.|+||++|||+... ..+ .+ ....+.|++ +||+|+.++.+|+.++|
T Consensus 447 g~~i~~~~~~p~~~~~~--~~~P~vl~~hGg~~~~--------~~~-~~----~~~~~~l~~~~G~~v~~~d~rG~g~~g 511 (710)
T 2xdw_A 447 GTKIPMFIVHKKGIKLD--GSHPAFLYGYGGFNIS--------ITP-NY----SVSRLIFVRHMGGVLAVANIRGGGEYG 511 (710)
T ss_dssp SCEEEEEEEEETTCCCS--SCSCEEEECCCCTTCC--------CCC-CC----CHHHHHHHHHHCCEEEEECCTTSSTTH
T ss_pred CCEEEEEEEecCCCCCC--CCccEEEEEcCCCCCc--------CCC-cc----cHHHHHHHHhCCcEEEEEccCCCCCCC
Confidence 99999999999986443 3589999999986421 111 11 123456777 99999999999887776
Q ss_pred CCCCc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCCC-----
Q 005240 571 DKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT----- 642 (706)
Q Consensus 571 ~~~~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~~----- 642 (706)
..+.. ..+....+.|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+|+|+.+|+.++...
T Consensus 512 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~ 591 (710)
T 2xdw_A 512 ETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTI 591 (710)
T ss_dssp HHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTT
T ss_pred hHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCC
Confidence 55432 2334467899999999999999999999999999999999999999999999999999998763210
Q ss_pred ----------------------------------------Ccc------------chHHHHHHHHHhC-------CCcEE
Q 005240 643 ----------------------------------------PFG------------FQAERFFDALKGH-------GALSR 663 (706)
Q Consensus 643 ----------------------------------------~~~------------~~~~~~~~~l~~~-------~~~~~ 663 (706)
|.. .+..+|+++|+.. +++++
T Consensus 592 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 671 (710)
T 2xdw_A 592 GHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLL 671 (710)
T ss_dssp GGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEE
T ss_pred ChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEE
Confidence 000 0223899999987 89999
Q ss_pred EEEeCCCCccCCCcc-cHHHHHHHHHHHHHHHhcc
Q 005240 664 LVLLPFEHHVYAARE-NVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 664 ~~~~~~~~H~~~~~~-~~~~~~~~~~~f~~~~l~~ 697 (706)
++++++++|++.... ...+.+..+++||.++|..
T Consensus 672 ~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 672 IHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp EEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999987643 4578889999999999864
No 10
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=8.1e-43 Score=403.33 Aligned_cols=537 Identities=12% Similarity=0.079 Sum_probs=356.1
Q ss_pred eeCCCCCeEEEEeeccccccccCCceeEEEEEcC---CCceeecccCCC--ccccccccceEEecCCcEEEEEecCCCCC
Q 005240 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE---TGEAKPLFESPD--ICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 37 ~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~---~g~~~~lt~~~~--~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
..+|||++++|.++.. ......||+++.. +++.++|+.... ......+..+.|||||++|+|.+...+.
T Consensus 113 ~p~pdG~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~- 186 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSG-----LMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS- 186 (741)
T ss_dssp CCEEETTEEEEEEECS-----SCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC-
T ss_pred CCEEECCEEEEEEEcC-----CCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC-
Confidence 3459999999998631 1225789999987 777777643211 0001125689999999999998653222
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCC-ceEeeeeeCCCCcEE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYV 189 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~-~~~~~~~~SpDG~~i 189 (706)
...+|+++|+ +|+....... .....++|||| +.|
T Consensus 187 -------------------------------------------e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l 222 (741)
T 1yr2_A 187 -------------------------------------------DWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DAL 222 (741)
T ss_dssp -------------------------------------------SEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEE
T ss_pred -------------------------------------------ceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEE
Confidence 1258999999 4565544322 22358999999 999
Q ss_pred EEEeeccCcc-cccccccccceEEEEecCCCee--EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCC
Q 005240 190 LITSMHRPYS-YKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (706)
Q Consensus 190 ~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~ 266 (706)
+|++...+.. ..........+|+++++.++.. +.+...... + .....+.|||||+. |++......
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~---~-------~~~~~~~~SpDG~~-l~~~~~~~~- 290 (741)
T 1yr2_A 223 LYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL---P-------KRGHGASVSSDGRW-VVITSSEGT- 290 (741)
T ss_dssp EEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC---T-------TCEEEEEECTTSCE-EEEEEECTT-
T ss_pred EEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC---C-------eEEEEEEECCCCCE-EEEEEEccC-
Confidence 9998654310 0000111245799999986542 233332211 0 01236789999998 776653221
Q ss_pred CCccccCccceeeeecCCCCCCC--C-ceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeec
Q 005240 267 DANVEVSPRDIIYTQPAEPAEGE--K-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 343 (706)
Q Consensus 267 ~~~~~~~~~~~l~~~d~~~~~~~--~-~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~ 343 (706)
+ ....||++|+ +++ + .+.|+........+ |+|||+.|++.++......+|+++|++++..+.+.++.
T Consensus 291 ~------~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 291 D------PVNTVHVARV---TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp C------SCCEEEEEEE---ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC
T ss_pred C------CcceEEEEEC---CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec
Confidence 0 1236999998 566 6 77777554444444 45999999998766555778999999874212344432
Q ss_pred CcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhh
Q 005240 344 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 423 (706)
Q Consensus 344 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 423 (706)
..-..+ ..+.++ +..+++.... .....|+.++++++..+.+......
T Consensus 361 ~~~~~l------~~~~~~--~~~lv~~~~~------------------dg~~~l~~~~~~g~~~~~l~~~~~~------- 407 (741)
T 1yr2_A 361 ESKDNL------ESVGIA--GNRLFASYIH------------------DAKSQVLAFDLDGKPAGAVSLPGIG------- 407 (741)
T ss_dssp CCSSEE------EEEEEE--BTEEEEEEEE------------------TTEEEEEEEETTSCEEEECBCSSSC-------
T ss_pred CCCCeE------EEEEEE--CCEEEEEEEE------------------CCEEEEEEEeCCCCceeeccCCCCe-------
Confidence 211110 013333 5566665532 1223577788754444444321110
Q ss_pred hhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCCCCCCCCCceEEEEEEccCCeEEEEEEEecC
Q 005240 424 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPP 503 (706)
Q Consensus 424 ~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~l~~P~ 503 (706)
....+++++|++.|+|++++..+|++||++|+.+++.+.+...+..+ ....+..+.+.+++.||..|+++++.|+
T Consensus 408 ----~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~~~~-~~~~~~~~~~~~~~~dg~~i~~~~~~p~ 482 (741)
T 1yr2_A 408 ----SASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVHLTF-DPADFRVEQVFYPSKDGTKVPMFIVRRK 482 (741)
T ss_dssp ----EEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCCCSS-CGGGEEEEEEEEECTTSCEEEEEEEEET
T ss_pred ----EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCCC-ChhHCEEEEEEEEcCCCCEEEEEEEecC
Confidence 01246789999999999999999999999999998877776532211 2345688999999999999999999998
Q ss_pred CCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc---hhhHH
Q 005240 504 GYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVE 580 (706)
Q Consensus 504 ~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~ 580 (706)
++ . ++.|+||++|||+... .........+.|+++||+|+.++.+|+.++|..+.. ..+..
T Consensus 483 ~~-~---~~~p~vl~~hGg~~~~-------------~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~ 545 (741)
T 1yr2_A 483 DA-K---GPLPTLLYGYGGFNVA-------------LTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQ 545 (741)
T ss_dssp TC-C---SCCCEEEECCCCTTCC-------------CCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTH
T ss_pred CC-C---CCCcEEEEECCCCCcc-------------CCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCC
Confidence 75 2 3589999999986421 111112345678899999999999988777655432 22334
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCCC---------------C--
Q 005240 581 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---------------P-- 643 (706)
Q Consensus 581 ~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~~---------------~-- 643 (706)
..++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+|+|+.+|+.++... |
T Consensus 546 ~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~ 625 (741)
T 1yr2_A 546 NVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYWVDDYGYPEK 625 (741)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGGHHHHCCTTS
T ss_pred CcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchhHHHcCCCCC
Confidence 56899999999999999999999999999999999999999999999999999998764210 0
Q ss_pred ------------------------cc------------chHHHHHHHHHh---CCCcEEEEEeCCCCccCCCc-ccHHHH
Q 005240 644 ------------------------FG------------FQAERFFDALKG---HGALSRLVLLPFEHHVYAAR-ENVMHV 683 (706)
Q Consensus 644 ------------------------~~------------~~~~~~~~~l~~---~~~~~~~~~~~~~~H~~~~~-~~~~~~ 683 (706)
.. .+..+++++|+. .+++++++++++++|.+... ....+.
T Consensus 626 ~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~ 705 (741)
T 1yr2_A 626 EADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEE 705 (741)
T ss_dssp HHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHH
T ss_pred HHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHH
Confidence 00 022389999999 89999999999999998754 235688
Q ss_pred HHHHHHHHHHHhccCCC
Q 005240 684 IWETDRWLQKYCLSNTS 700 (706)
Q Consensus 684 ~~~~~~f~~~~l~~~~~ 700 (706)
...+++||.++|.....
T Consensus 706 ~~~~~~fl~~~l~~~~~ 722 (741)
T 1yr2_A 706 TADVQAFLAHFTGLTPR 722 (741)
T ss_dssp HHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHcCCCcc
Confidence 89999999999975443
No 11
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=1.9e-42 Score=396.49 Aligned_cols=536 Identities=12% Similarity=0.052 Sum_probs=363.8
Q ss_pred eeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCC--ccccccccceEEecCCcEEEEEecCCCCCCCC
Q 005240 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD--ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPK 114 (706)
Q Consensus 37 ~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~--~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~ 114 (706)
..+++|.+++|..+.. .....-+|+.+.++++ +.|..... ......+..+.|||||++|+|.....+.+
T Consensus 83 ~p~~~g~~~y~~~~~~-----~~~~~~~~r~~~~~~~-~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~--- 153 (693)
T 3iuj_A 83 APFREGRYHYFFKNDG-----LQNQNVLWRQQEGKPA-EVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSD--- 153 (693)
T ss_dssp CCEEETTEEEEEEECS-----SCSSCEEEEECTTSCC-EEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCC---
T ss_pred CCEEECCEEEEEEEcC-----CCceeEEEEeCCCCCc-EEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCc---
Confidence 3468999999987521 1223456766554444 32322110 00111256789999999999987543321
Q ss_pred CCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCCce-EeeeeeCCCCcEEEEE
Q 005240 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTPAV-YTAVEPSPDQKYVLIT 192 (706)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~~~-~~~~~~SpDG~~i~~~ 192 (706)
...|+++|+ +|+....+.... ...++|| ||+.|+|+
T Consensus 154 -----------------------------------------~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~ 191 (693)
T 3iuj_A 154 -----------------------------------------WREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYS 191 (693)
T ss_dssp -----------------------------------------EEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEE
T ss_pred -----------------------------------------eEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEE
Confidence 268999999 566555433322 4688999 99999999
Q ss_pred eeccCcccccccccccceEEEEecCCCe--eEEcccCCC-CCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCc
Q 005240 193 SMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPP-AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (706)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~-~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~ 269 (706)
+...+............+|+++++.+.. .+.+..... . + .....+.|||||+. |++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~---~-------~~~~~~~~SpDg~~-l~~~~~~~~~--- 257 (693)
T 3iuj_A 192 SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ---H-------HRYVGATVTEDDRF-LLISAANSTS--- 257 (693)
T ss_dssp ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG---C-------CSEEEEEECTTSCE-EEEEEESSSS---
T ss_pred EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC---C-------eEEEEEEEcCCCCE-EEEEEccCCC---
Confidence 8764210000011124689999998543 244443322 1 1 01125689999998 7665432221
Q ss_pred cccCccceeeeecCCCCCCC--CceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCC-CceeeecCcc
Q 005240 270 VEVSPRDIIYTQPAEPAEGE--KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFDRVF 346 (706)
Q Consensus 270 ~~~~~~~~l~~~d~~~~~~~--~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~-~~~~l~~~~~ 346 (706)
...||++|+ +++ +.+.|+........+ |+++|..|++.++......+|+.+|+++++. ..+.++...-
T Consensus 258 -----~~~i~~~d~---~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 328 (693)
T 3iuj_A 258 -----GNRLYVKDL---SQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ 328 (693)
T ss_dssp -----CCEEEEEET---TSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred -----CcEEEEEEC---CCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC
Confidence 135899998 444 567777554444444 8899999998876655567899999998531 1244432211
Q ss_pred cccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhc
Q 005240 347 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 426 (706)
Q Consensus 347 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 426 (706)
.. +.|+++|++|++....+ ....|+.++++++..+.+......
T Consensus 329 -------~~--~~~s~~g~~lv~~~~~~------------------g~~~l~~~d~~g~~~~~l~~p~~~---------- 371 (693)
T 3iuj_A 329 -------QV--LTVHSGSGYLFAEYMVD------------------ATARVEQFDYEGKRVREVALPGLG---------- 371 (693)
T ss_dssp -------SC--EEEEEETTEEEEEEEET------------------TEEEEEEECTTSCEEEEECCSSSS----------
T ss_pred -------CE--EEEEEECCEEEEEEEEC------------------CeeEEEEEECCCCeeEEeecCCCc----------
Confidence 11 26899999998876431 223577788876655555322110
Q ss_pred cCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCCCCCCCCCceEEEEEEccCCeEEEEEEEecCCCC
Q 005240 427 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYD 506 (706)
Q Consensus 427 ~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~l~~P~~~~ 506 (706)
....+++++|++.+++++++..+|+.+|++|+.+++.+.|+..+..+. ...+..+.+.+++.||..|+++++.|+++.
T Consensus 372 -~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~~~~~-~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~ 449 (693)
T 3iuj_A 372 -SVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASAAPFK-PEDYVSEQRFYQSKDGTRVPLIISYRKGLK 449 (693)
T ss_dssp -EEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCCSSCC-GGGEEEEEEEEECTTSCEEEEEEEEESSCC
T ss_pred -eEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCCCCcC-hhhCeeEEEEEecCCCcEEEEEEEecCCCC
Confidence 011356788999999999999999999999999999888887654432 234688999999999999999999999865
Q ss_pred CCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc---hhhHHHHH
Q 005240 507 QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLV 583 (706)
Q Consensus 507 ~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~ 583 (706)
.. ++.|+||++|||+... .........+.|+++||+|+.++.||+.++|..+.. .......+
T Consensus 450 ~~--~~~P~ll~~hGg~~~~-------------~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~ 514 (693)
T 3iuj_A 450 LD--GSNPTILYGYGGFDVS-------------LTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVF 514 (693)
T ss_dssp CS--SCCCEEEECCCCTTCC-------------CCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHH
T ss_pred CC--CCccEEEEECCCCCcC-------------CCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcH
Confidence 43 3589999999986321 111112345788999999999999988877765432 23444678
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCCC---------------------
Q 005240 584 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT--------------------- 642 (706)
Q Consensus 584 ~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~~--------------------- 642 (706)
+|+.++++||++++++|++||+|+|+|+||+|+++++.++|++|+|+|+.+|+.|+...
T Consensus 515 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~ 594 (693)
T 3iuj_A 515 DDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEA 594 (693)
T ss_dssp HHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHHHCCTTSCHH
T ss_pred HHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHHcCCccCHHH
Confidence 99999999999999999999999999999999999999999999999999999874310
Q ss_pred --------------------C-cc------------chHHHHHHHHHhC---CCcEEEEEeCCCCccCCCc-ccHHHHHH
Q 005240 643 --------------------P-FG------------FQAERFFDALKGH---GALSRLVLLPFEHHVYAAR-ENVMHVIW 685 (706)
Q Consensus 643 --------------------~-~~------------~~~~~~~~~l~~~---~~~~~~~~~~~~~H~~~~~-~~~~~~~~ 685 (706)
| .. .+..+|+++|+.. +++++++++|+++|++... ....+.+.
T Consensus 595 ~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 674 (693)
T 3iuj_A 595 MFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSA 674 (693)
T ss_dssp HHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHH
T ss_pred HHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHH
Confidence 0 00 0223899999987 5899999999999998764 45678889
Q ss_pred HHHHHHHHHhccCCC
Q 005240 686 ETDRWLQKYCLSNTS 700 (706)
Q Consensus 686 ~~~~f~~~~l~~~~~ 700 (706)
.+++||.++|+....
T Consensus 675 ~~~~fl~~~l~~~~~ 689 (693)
T 3iuj_A 675 DIYAFTLYEMGYREL 689 (693)
T ss_dssp HHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHcCCCCC
Confidence 999999999976543
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=9.7e-41 Score=384.35 Aligned_cols=528 Identities=12% Similarity=0.040 Sum_probs=352.1
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEc---CCC--ceeecccCCCc--ccc-ccccceEEe-cCCcEEEE
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA---ETG--EAKPLFESPDI--CLN-AVFGSFVWV-NNSTLLIF 103 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~---~~g--~~~~lt~~~~~--~~~-~~~~~~~wS-pDg~~l~~ 103 (706)
.+.|. |+|.+++|+++.. +....-+++.+. .++ +.+.+...... +.. ..+..+.|| |||++|+|
T Consensus 119 ~~~p~--~~g~~~yy~~~~~-----g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy 191 (751)
T 2xe4_A 119 MSAPY--VYGKYRYYTREVK-----GKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAF 191 (751)
T ss_dssp ECCCE--EETTEEEEEEECT-----TCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEE
T ss_pred CCCCe--EECCEEEEEEECC-----CCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEE
Confidence 44453 7999999997631 122346788876 454 43444321100 000 024578999 99999999
Q ss_pred EecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCC-ceecCCC--ceEeee
Q 005240 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAV 180 (706)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~-~~~lt~~--~~~~~~ 180 (706)
.....+.. ..+||++++++. . .+... .....+
T Consensus 192 ~~~~~G~~--------------------------------------------~~~l~v~dl~~g~~-~l~~~~~~~~~~~ 226 (751)
T 2xe4_A 192 SVDMSGNE--------------------------------------------VYTIEFKRISDPSQ-TIADKVSGTNGEI 226 (751)
T ss_dssp EEESSSSS--------------------------------------------CEEEEEEETTCTTC-CCCCCEEEECSCC
T ss_pred EEeCCCCc--------------------------------------------eEEEEEEECCCCCE-eCCccccCceeeE
Confidence 87532221 157999999442 2 22222 234579
Q ss_pred eeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee--EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEE
Q 005240 181 EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (706)
Q Consensus 181 ~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~ 258 (706)
+|||||+.|+|++..... ...+|+++++.++.. +.+....... ....+.|||||+. |+
T Consensus 227 ~WspDg~~l~y~~~d~~~--------~~~~v~~~~lgt~~~~~~lv~~~~~~~-----------~~~~~~~SpDg~~-l~ 286 (751)
T 2xe4_A 227 VWGPDHTSLFYVTKDETL--------RENKVWRHVMGKLQSEDVCLYEEHNPL-----------FSAFMYKAADTNT-LC 286 (751)
T ss_dssp EECSSTTEEEEEEECTTC--------CEEEEEEEETTSCGGGCEEEEECCCTT-----------CEEEEEECTTSSE-EE
T ss_pred EEecCCCEEEEEEECCCC--------CCCEEEEEECCCCchhcEEEEecCCCc-----------eEEEEEECCCCCE-EE
Confidence 999999999999765321 135899999987542 2333221110 0125689999998 77
Q ss_pred EEEeccCCCCccccCccceeeeecCCCCCCC--Cc--eEEeecccccccceecCC---CceEEEEeecc-ccceEEEEEc
Q 005240 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGE--KP--EILHKLDLRFRSVSWCDD---SLALVNETWYK-TSQTRTWLVC 330 (706)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--~~--~~l~~~~~~~~~~~wspD---g~~l~~~~~~~-~~~~~l~~~d 330 (706)
+..... ....||++|+ +++ +. +.|+... ..+.|+++ |..|++.++.. ....+||.++
T Consensus 287 ~~~~~~---------~~~~l~~~d~---~~~~~~~~~~~l~~~~---~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d 351 (751)
T 2xe4_A 287 IGSQSP---------ETAEVHLLDL---RKGNAHNTLEIVRPRE---KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAP 351 (751)
T ss_dssp EEEECS---------SCEEEEEEES---SSCTTCCCEEESSCCC---TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEE
T ss_pred EEecCC---------CCceEEEEEC---CCCCCCceeEEeecCC---CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEc
Confidence 765321 1236999998 443 34 5554322 34556666 88888887664 4677899999
Q ss_pred CCCCCCCcee-eecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeec-------
Q 005240 331 PGSKDVAPRV-LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI------- 402 (706)
Q Consensus 331 ~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~------- 402 (706)
++++ .+.+. ++..... .....++.++++|++....+ ....|+.+++
T Consensus 352 ~~~~-~~~~~~li~~~~~-------~~l~~~~~~~~~lv~~~~~~------------------g~~~l~~~dl~~~~~~~ 405 (751)
T 2xe4_A 352 RGQP-SDWSHVLVDHSED-------VFMESIAVRSNYLVVAGRRA------------------GLTRIWTMMADSQDGVF 405 (751)
T ss_dssp TTST-TCCCCEEECCCSS-------EEEEEEEECSSEEEEEEEET------------------TEEEEEEEECCTTTSCC
T ss_pred CCCc-ccceeeEECCCCC-------cEEEEEEEECCEEEEEEEeC------------------CEEEEEEEecccccccc
Confidence 8863 12233 3221110 01122455677887776431 2235667775
Q ss_pred CCCc-eeeeecccchhhhhhhhhhccCCCceec----ccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCC-CCC
Q 005240 403 NTGS-KERIWESNREKYFETAVALVFGQGEEDI----NLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHP-YPT 476 (706)
Q Consensus 403 ~~g~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~----s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~-~~~ 476 (706)
++|+ .++|...... .. ..+.+ ++|++.+++++++..+|+++|++|+.+++.+.|+..+.. ...
T Consensus 406 ~~g~~~~~l~l~~~~----~~-------~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~~~~~~~~~ 474 (751)
T 2xe4_A 406 KAGTGLREVVMEEPI----FT-------VHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKVREVGGGFD 474 (751)
T ss_dssp CTTTCCEECCCCCSS----CE-------EEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEECCCCTTCC
T ss_pred cCCccceEECCCCce----eE-------EEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEeccccccCCC
Confidence 4555 5555321110 00 01222 568889999999999999999999999998888876532 112
Q ss_pred CCCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCe
Q 005240 477 LASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (706)
Q Consensus 477 ~~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 556 (706)
...+.++.+.+++.||..|+++++.|+++++. +++|+||++|||+... .. ..+ ....+.|+++||
T Consensus 475 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~--~~~P~vl~~HGg~~~~------~~---~~~----~~~~~~l~~~G~ 539 (751)
T 2xe4_A 475 AANYKVERRFATAPDQTKIPLSVVYHKDLDMS--QPQPCMLYGYGSYGLS------MD---PQF----SIQHLPYCDRGM 539 (751)
T ss_dssp GGGEEEEEEEEECTTCCEEEEEEEEETTSCTT--SCCCEEEECCCCTTCC------CC---CCC----CGGGHHHHTTTC
T ss_pred ccceEEEEEEEECCCCcEEEEEEEcCCCCCCC--CCccEEEEECCCCCcC------CC---Ccc----hHHHHHHHhCCc
Confidence 23457899999999999999999999986443 3589999999986421 10 111 123567889999
Q ss_pred EEEEcCCCCcCCCCCCCCc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEe
Q 005240 557 AVLAGPSIPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 632 (706)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 632 (706)
+|+.++.+|+.++|+.+.. ..+....++|+.++++||++++++|++||+|+|+|+||+++++++.++|++|+|+|+
T Consensus 540 ~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~ 619 (751)
T 2xe4_A 540 IFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALA 619 (751)
T ss_dssp EEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEE
T ss_pred EEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEE
Confidence 9999999998888766432 233456789999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCC------------------C------------------------C-cc------------chHHHHHHHHHh
Q 005240 633 RSGSYNKTL------------------T------------------------P-FG------------FQAERFFDALKG 657 (706)
Q Consensus 633 ~~~~~d~~~------------------~------------------------~-~~------------~~~~~~~~~l~~ 657 (706)
.+|+.|+.. . | .. .+..+|+++|+.
T Consensus 620 ~~~~~d~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~ 699 (751)
T 2xe4_A 620 GVPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRE 699 (751)
T ss_dssp ESCCCCHHHHHTCTTSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHH
T ss_pred eCCcchHHhhhcccCcccchhhHHHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHh
Confidence 999876210 0 0 00 023389999998
Q ss_pred CC---CcEEEEEeCCCCccCCCcc-cHHHHHHHHHHHHHHHhccCC
Q 005240 658 HG---ALSRLVLLPFEHHVYAARE-NVMHVIWETDRWLQKYCLSNT 699 (706)
Q Consensus 658 ~~---~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~f~~~~l~~~~ 699 (706)
.+ .++.+.+||+++|.+.... ...+....+++||.++|+...
T Consensus 700 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~~ 745 (751)
T 2xe4_A 700 CKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKSTV 745 (751)
T ss_dssp HCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred cCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCCCc
Confidence 84 4567777899999987543 455677789999999997543
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=1.1e-31 Score=301.36 Aligned_cols=250 Identities=12% Similarity=0.061 Sum_probs=201.3
Q ss_pred ecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCCCCCCCCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCC
Q 005240 433 DINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGP 512 (706)
Q Consensus 433 ~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~ 512 (706)
++++|+..+++++++..+|+.+|++|+. ++.+.|+..+..+.. ..+.+|.+.+++.||.+|+++++.|+++++.+ +
T Consensus 402 ~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~~~~~~-~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~--~ 477 (711)
T 4hvt_A 402 SSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIRKALYSFDS-ENYVLEQKEATSFDGVKIPYFLVYKKGIKFDG--K 477 (711)
T ss_dssp ECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCSSCCCG-GGEEEEEEEEECTTSCEEEEEEEEETTCCCSS--C
T ss_pred eecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCCcccCc-ccCeeEEEEEECCCCeEEEEEEEecCCCCCCC--C
Confidence 4456788899999999999999999988 888888877644433 33588999999999999999999999875433 5
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc---hhhHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 589 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~D~~~~ 589 (706)
+|+||++|||+... .. ..+ .....+.|+++||+|+.+++||+.++|..+.. ..+....++|+.++
T Consensus 478 ~P~vl~~HGG~~~~--------~~-~~~---~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aa 545 (711)
T 4hvt_A 478 NPTLLEAYGGFQVI--------NA-PYF---SRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAV 545 (711)
T ss_dssp CCEEEECCCCTTCC--------CC-CCC---CHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHH
T ss_pred ccEEEEECCCCCCC--------CC-Ccc---cHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHH
Confidence 89999999997532 11 111 11233588999999999999999888876542 34556789999999
Q ss_pred HHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCCC---------------Ccc---------
Q 005240 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---------------PFG--------- 645 (706)
Q Consensus 590 ~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~~---------------~~~--------- 645 (706)
++||++++++|++||+|+|+|+||+|+++++.++|++|+|+|+.+|++|+... |..
T Consensus 546 v~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~~~~G~p~~~~~~~~l~~ 625 (711)
T 4hvt_A 546 SEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWVTEYGDPEIPNDLLHIKK 625 (711)
T ss_dssp HHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHH
T ss_pred HHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHHHHHhCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998875321 000
Q ss_pred -----------------------------chHHHHHHHH-HhCCCcEEEEEeCCCCccCCCc-ccHHHHHHHHHHHHHHH
Q 005240 646 -----------------------------FQAERFFDAL-KGHGALSRLVLLPFEHHVYAAR-ENVMHVIWETDRWLQKY 694 (706)
Q Consensus 646 -----------------------------~~~~~~~~~l-~~~~~~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~f~~~~ 694 (706)
.++.+|+++| ++.++++++++||+++|++... ......+..+.+||.++
T Consensus 626 ~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~ 705 (711)
T 4hvt_A 626 YAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANA 705 (711)
T ss_dssp HCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHH
Confidence 0223899999 9999999999999999998653 33567778899999999
Q ss_pred hccC
Q 005240 695 CLSN 698 (706)
Q Consensus 695 l~~~ 698 (706)
|+.+
T Consensus 706 Lg~~ 709 (711)
T 4hvt_A 706 LKLK 709 (711)
T ss_dssp HTCC
T ss_pred hCCc
Confidence 8653
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.94 E-value=1e-24 Score=231.79 Aligned_cols=344 Identities=12% Similarity=0.083 Sum_probs=215.8
Q ss_pred CCCeeeeecCCCC---CcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEE
Q 005240 18 LGPEKEVHGYPDG---AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW 94 (706)
Q Consensus 18 ~g~~~~i~~~~~~---~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~w 94 (706)
+++.++++..+.. .....|+|||||++|||.+.. ++..+||++|+++++.++++..... ....+.|
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~-------~g~~~l~~~d~~~g~~~~lt~~~~~----~~~~~~~ 88 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF-------DGPWNYYLLDLNTQVATQLTEGRGD----NTFGGFL 88 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT-------TSSCEEEEEETTTCEEEECCCSSCB----CSSSCEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcC-------CCCceEEEEeCCCCceEEeeeCCCC----CccceEE
Confidence 3677777754432 123449999999999998752 4567999999999999999866543 1236799
Q ss_pred ecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCC
Q 005240 95 VNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT 173 (706)
Q Consensus 95 SpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~ 173 (706)
||||++|+|... ...||++++ +|+.+.+..
T Consensus 89 spdg~~l~~~~~-------------------------------------------------~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 89 SPDDDALFYVKD-------------------------------------------------GRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CTTSSEEEEEET-------------------------------------------------TTEEEEEETTTCCEEEEEE
T ss_pred cCCCCEEEEEeC-------------------------------------------------CCeEEEEECCCCcceeeee
Confidence 999999999852 157999999 456665544
Q ss_pred C--ceE--eeeeeCCCCcEEEEEeeccCcc-ccc--------ccccccceEEEEecCCCeeEEcccCCCCCCCCcccCcc
Q 005240 174 P--AVY--TAVEPSPDQKYVLITSMHRPYS-YKV--------PCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (706)
Q Consensus 174 ~--~~~--~~~~~SpDG~~i~~~~~~~~~~-~~~--------~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~ 240 (706)
. ... ....++|||+.|+......... ... ........|+++++.+++.+.++.....
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~---------- 189 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQW---------- 189 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSC----------
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCcc----------
Confidence 3 223 2334599999998654332110 000 0011236899999998888888754321
Q ss_pred CCCCcceeeec-CCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecc--cccccceecCCCceEEEEe
Q 005240 241 REGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--LRFRSVSWCDDSLALVNET 317 (706)
Q Consensus 241 ~~g~~~~~~sp-dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~~~~wspDg~~l~~~~ 317 (706)
...+.||| ||+. |+|+.... .+. ....|+++|+ ++++.+.|+... ..+..+.|||||+.|+|.+
T Consensus 190 ---~~~~~~sp~dg~~-l~~~~~~~-~~~-----~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 190 ---LGHPIYRPYDDST-VAFCHEGP-HDL-----VDARMWLINE---DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp ---EEEEEEETTEEEE-EEEEECSC-TTT-----SSCSEEEEET---TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred ---ccccEECCCCCCE-EEEEEecC-CCC-----CcceEEEEeC---CCCceEEeeeCCCCcccccceECCCCCEEEEEe
Confidence 23679999 9988 88775421 110 1235899988 677888887654 3467889999999998876
Q ss_pred ecccc-ceEEEEEcCCCCCCCceeeecCcc-cccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCC
Q 005240 318 WYKTS-QTRTWLVCPGSKDVAPRVLFDRVF-ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIP 395 (706)
Q Consensus 318 ~~~~~-~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 395 (706)
...+. ...||++|++++ +.+.+..... ......+. ...|||||++|++..... .|.+. ....
T Consensus 257 ~~~~~~~~~l~~~d~~~g--~~~~l~~~~~~~~~~~~~~--~~~~spdg~~l~~~~~~~-----------~~~~~-~~~~ 320 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPETL--ENRQLTSMPACSHLMSNYD--GSLMVGDGSDAPVDVQDD-----------SGYKI-ENDP 320 (388)
T ss_dssp EETTCCCEEEEEECTTTC--CEEEEEEECCEEEEEECTT--SSEEEEEECCC------------------------CCCC
T ss_pred cCCCCCcceEEEEecCCC--ceEEEEcCCCceeeeecCC--CCeEccCCCcceeEeeec-----------ccccc-CCCC
Confidence 54332 236999999985 4455533221 00000111 136899999998865320 00010 1234
Q ss_pred ceeeeecCCCceeeeecccchhhhhhhh-hhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCc
Q 005240 396 FLDLFDINTGSKERIWESNREKYFETAV-ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (706)
Q Consensus 396 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~ 463 (706)
.|+++|+++++.++|...... ...+. .-......+.|||||++|+|+.... ..++||++++..+.
T Consensus 321 ~i~~~d~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~-g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 321 FLYVFNMKNGTQHRVARHDTS--WKVFEGDRQVTHPHPSFTPDDKQILFTSDVH-GKPALYLATLPESV 386 (388)
T ss_dssp EEEEEETTTTEEEEEEECCCC--CCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCGGG
T ss_pred EEEEEeccCCceEEeccccCc--ccccccccccCCCCccCCCCCCEEEEEecCC-CceeEEEEECChhc
Confidence 689999999988887655320 00000 0000123579999999999986554 66789999986543
No 15
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.90 E-value=3.2e-22 Score=212.89 Aligned_cols=326 Identities=10% Similarity=0.073 Sum_probs=200.4
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~ 112 (706)
+..++|||||++|||+... ++..+||++++++++.++++..... ....+.|||||++|+|....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~-------~g~~~l~~~d~~~~~~~~l~~~~~~----~~~~~~~spdg~~l~~~~~~----- 101 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDF-------DGNRNYYLLNLETQQAVQLTEGKGD----NTFGGFISTDERAFFYVKNE----- 101 (396)
T ss_dssp TTSCCBCTTSCEEEEEECT-------TSSCEEEEEETTTTEEEECCCSSCB----CTTTCEECTTSSEEEEEETT-----
T ss_pred eecCcCCCCCCEEEEEEec-------CCCceEEEEECCCCcEEEeecCCCC----ccccceECCCCCEEEEEEcC-----
Confidence 6789999999999998752 4557899999999999999765432 12348999999999988531
Q ss_pred CCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC-CCceecCCC--ceEee----------
Q 005240 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GTAKDFGTP--AVYTA---------- 179 (706)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~-g~~~~lt~~--~~~~~---------- 179 (706)
.+||+++++ |+.++++.. .....
T Consensus 102 --------------------------------------------~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 137 (396)
T 3c5m_A 102 --------------------------------------------LNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCT 137 (396)
T ss_dssp --------------------------------------------TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred --------------------------------------------CcEEEEECCCCCcEEEEecccccCCCCCEEEeccCC
Confidence 468899984 466666543 11111
Q ss_pred ---------eeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeee
Q 005240 180 ---------VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWR 250 (706)
Q Consensus 180 ---------~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~s 250 (706)
+.|||||++|++...... .....|+++++++++.+.+..... ....+.||
T Consensus 138 ~~~~~~~~~~~~spdg~~~~~~~~~~~--------~~~~~l~~~d~~~g~~~~~~~~~~-------------~~~~~~~s 196 (396)
T 3c5m_A 138 KLVGIEILKRDWQPLTSWEKFAEFYHT--------NPTCRLIKVDIETGELEVIHQDTA-------------WLGHPIYR 196 (396)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHHHT--------CCCEEEEEEETTTCCEEEEEEESS-------------CEEEEEEE
T ss_pred ccccccccccccCCCCcceeeeeeccC--------CCcceEEEEECCCCcEEeeccCCc-------------ccccceEC
Confidence 345666665554331000 113589999999888777764321 13367999
Q ss_pred c-CCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec--ccccccceecCCCceEEEEeeccc-cceEE
Q 005240 251 A-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWCDDSLALVNETWYKT-SQTRT 326 (706)
Q Consensus 251 p-dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~--~~~~~~~~wspDg~~l~~~~~~~~-~~~~l 326 (706)
| ||+. |+|+.. .... .....|+++++ ++++.+.++.. ...+..+.|||||+.|++.+...+ ....|
T Consensus 197 p~dg~~-l~~~~~--~~~~----~~~~~l~~~d~---~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 197 PFDDST-VGFCHE--GPHD----LVDARMWLVNE---DGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp TTEEEE-EEEEEC--SCSS----SCSCCCEEEET---TSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred CCCCCE-EEEEec--CCCC----CCCceEEEEEC---CCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 9 7877 877753 1110 01135889988 67777777653 235677899999999998764432 22459
Q ss_pred EEEcCCCCCCCceeeecCcccccccCCCCCceEecc-CCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCC
Q 005240 327 WLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTG 405 (706)
Q Consensus 327 ~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g 405 (706)
|++|++++ +.+.+.... +.. +.|+| ||+.+++.... .. +.....+.........|+++|++++
T Consensus 267 ~~~d~~~g--~~~~l~~~~--------~~~-~~~s~~dg~~l~~~~~~--~p---~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 267 YKANPETL--ENEEVMVMP--------PCS-HLMSNFDGSLMVGDGCD--AP---VDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEECTTTC--CEEEEEECC--------SEE-EEEECSSSSEEEEEECC--C-------------CCCCCCEEEEEETTTT
T ss_pred EEEECCCC--CeEEeeeCC--------CCC-CCccCCCCceEEEecCC--cc---eeeccccccccCCCCcEEEEecccC
Confidence 99999884 344443221 111 67899 99977764310 00 0000000000012346889999988
Q ss_pred ceeeeecccchhhhhhh-hhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEee
Q 005240 406 SKERIWESNREKYFETA-VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 468 (706)
Q Consensus 406 ~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt 468 (706)
+.++|...... ...+ .........+.|||||++|+++.... ..++||++++.+++.+.+.
T Consensus 331 ~~~~l~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 331 SAQKLCKHSTS--WDVLDGDRQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPESYKHLEH 391 (396)
T ss_dssp BCCEEEECCCC--CCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTTCC----
T ss_pred ceEEccCCCCc--cccccccccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEccccccccc
Confidence 87777543320 0000 00000123468999999999887654 5678999998887765553
No 16
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.90 E-value=3.5e-22 Score=230.73 Aligned_cols=334 Identities=9% Similarity=-0.006 Sum_probs=211.9
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc-cccccccceEEecCCcEEEEEecCCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI-CLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~-~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
...++|||||+.|+.. ...|+++++++|+.+++...... .......++.|||||++|+|.+......
T Consensus 19 ~~~~~w~~dg~~~~~~------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ------------ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW 86 (740)
T ss_dssp CCCEEECSSSEEEEEE------------TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECS
T ss_pred ccccEECCCCcEEEEc------------CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeE
Confidence 5689999999776552 25899999999998777543321 1111123489999999999976421100
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCC-ceEeeeeeCCCCcEE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYV 189 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~-~~~~~~~~SpDG~~i 189 (706)
.....+.+|++|+ +|+.++|+.. ..+..++|||||++|
T Consensus 87 ----------------------------------------r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~l 126 (740)
T 4a5s_A 87 ----------------------------------------RHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKL 126 (740)
T ss_dssp ----------------------------------------SSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCE
T ss_pred ----------------------------------------EEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEE
Confidence 0012378999999 5588888775 678899999999999
Q ss_pred EEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCC----CcccCcc--CCCCcceeeecCCCceEEEEEec
Q 005240 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI----PVCYNSV--REGMRSISWRADKPSTLYWVEAQ 263 (706)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~----p~~~~~~--~~g~~~~~~spdg~~~l~~~~~~ 263 (706)
+|... .+|+++++.+++.++|+........ +.++... ......+.|||||+. |+|....
T Consensus 127 a~~~~--------------~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d 191 (740)
T 4a5s_A 127 AYVWN--------------NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFN 191 (740)
T ss_dssp EEEET--------------TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEE
T ss_pred EEEEC--------------CeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCE-EEEEEEc
Confidence 99863 3799999998888888764322110 1000000 011235799999998 8877543
Q ss_pred cCCCCcc------------------------ccCccceeeeecCCCCCC---C---CceEEee------cccccccceec
Q 005240 264 DRGDANV------------------------EVSPRDIIYTQPAEPAEG---E---KPEILHK------LDLRFRSVSWC 307 (706)
Q Consensus 264 ~~~~~~~------------------------~~~~~~~l~~~d~~~~~~---~---~~~~l~~------~~~~~~~~~ws 307 (706)
.+..... .......|+++|+ ++ + +.++|.. ....+..++||
T Consensus 192 ~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ws 268 (740)
T 4a5s_A 192 DTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT---DSLSSVTNATSIQITAPASMLIGDHYLCDVTWA 268 (740)
T ss_dssp CTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET---TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEE
T ss_pred ccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC---CCCCCCCcceEEEecCCccCCCCCeEEEEEEEe
Confidence 2211100 0011126899999 66 6 5556653 45567889999
Q ss_pred CCCceEEEEeeccccceEEEEEcCCCCCC-----Cceeee-cCcccccccCCCCCceEeccCCCEEE-EeeeccCCcceE
Q 005240 308 DDSLALVNETWYKTSQTRTWLVCPGSKDV-----APRVLF-DRVFENVYSDPGSPMMTRTSTGTNVI-AKIKKENDEQIY 380 (706)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~-----~~~~l~-~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~~~~ 380 (706)
|||+.+++..+.......|+++|+++++. ..+.++ +..-..+. ......+.|||||+.|+ +...+
T Consensus 269 pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~-~~~~~~p~fspDG~~l~~~~s~~------- 340 (740)
T 4a5s_A 269 TQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVG-RFRPSEPHFTLDGNSFYKIISNE------- 340 (740)
T ss_dssp ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSS-SSSCCCCEECTTSSEEEEEEECT-------
T ss_pred CCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEc-cCcCCCceEcCCCCEEEEEEEcC-------
Confidence 99998877765555566899999988530 122221 21111111 00122478999999988 44322
Q ss_pred EEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEec--C-CCCcEEEEE
Q 005240 381 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES--K-TEITQYHIL 457 (706)
Q Consensus 381 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~--~-~~p~~v~~~ 457 (706)
.+..+|+++|+++++.++|+..... + ...+++|+++|+|+.+. . ..-..||++
T Consensus 341 -----------~G~~~l~~~~~~~~~~~~lT~g~~~-----v--------~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 341 -----------EGYRHICYFQIDKKDCTFITKGTWE-----V--------IGIEALTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp -----------TSCEEEEEEETTCSSCEESCCSSSC-----E--------EEEEEECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred -----------CCceEEEEEECCCCceEecccCCEE-----E--------EEEEEEeCCEEEEEEecCCCCCceeEEEEE
Confidence 2245799999998888888765421 1 11244678899998765 2 234679999
Q ss_pred ECCCCcee-Eee
Q 005240 458 SWPLKKSS-QIT 468 (706)
Q Consensus 458 ~~~~~~~~-~lt 468 (706)
++.+++.+ +||
T Consensus 397 ~~~g~~~~~~lt 408 (740)
T 4a5s_A 397 QLIDYTKVTCLS 408 (740)
T ss_dssp ETTEEEEEEESS
T ss_pred ECCCCCcceeec
Confidence 98876654 566
No 17
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=1.1e-21 Score=235.22 Aligned_cols=369 Identities=14% Similarity=0.041 Sum_probs=231.1
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
.|++.+++. |++++++..+. .+..++|||||++|||++..+. ..+..+||++++++++.++|+.+...
T Consensus 34 ~l~~~~~~g----g~~~~lt~~~~--~v~~~~~SPDG~~la~~s~~~~----~~~~~~i~~~d~~~g~~~~lt~~~~~-- 101 (1045)
T 1k32_A 34 DLWEHDLKS----GSTRKIVSNLG--VINNARFFPDGRKIAIRVMRGS----SLNTADLYFYNGENGEIKRITYFSGK-- 101 (1045)
T ss_dssp EEEEEETTT----CCEEEEECSSS--EEEEEEECTTSSEEEEEEEEST----TCCEEEEEEEETTTTEEEECCCCCEE--
T ss_pred cEEEEECCC----CcEEEeeeCCC--cccCeEECCCCCEEEEEEeecc----CCCCCeEEEEECCCCCeEEcccCCCc--
Confidence 688999966 99999985433 4889999999999999976311 13557999999999999999865542
Q ss_pred cccc-------cceEEecCCcEEEEEecCCCCC----CCCCCCCCCCCceeecCCCc--------cc-------------
Q 005240 86 NAVF-------GSFVWVNNSTLLIFTIPSSRRD----PPKKTMVPLGPKIQSNEQKN--------II------------- 133 (706)
Q Consensus 86 ~~~~-------~~~~wSpDg~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--------~~------------- 133 (706)
+ ..+.|||||+ |+|.+...... ....-....+...+...... .+
T Consensus 102 ---~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~ 177 (1045)
T 1k32_A 102 ---STGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWK 177 (1045)
T ss_dssp ---EETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTST
T ss_pred ---ccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccc
Confidence 4 6899999999 66655322100 00000000000000000000 00
Q ss_pred ------ccccch--h---------------ccCCchhhhhhh--hcccceEEEEccCC-CceecCCCceEeeeeeCCCCc
Q 005240 134 ------ISRMTD--N---------------LLKDEYDESLFD--YYTTAQLVLGSLDG-TAKDFGTPAVYTAVEPSPDQK 187 (706)
Q Consensus 134 ------~~~~~~--~---------------~~~~~~d~~~~~--~~~~~~l~~~~l~g-~~~~lt~~~~~~~~~~SpDG~ 187 (706)
....+. . ...+..+...+. ..+...||.++++| ..++++.......++|||||+
T Consensus 178 ~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~ 257 (1045)
T 1k32_A 178 GYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGR 257 (1045)
T ss_dssp TCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSS
T ss_pred cccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCC
Confidence 000000 0 000000100000 01335788888865 777777664455679999999
Q ss_pred EEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeee-cCCCceEEEEEeccCC
Q 005240 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWR-ADKPSTLYWVEAQDRG 266 (706)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~s-pdg~~~l~~~~~~~~~ 266 (706)
+|+|... ..|++|++++..+..+..... ...+.+.. .......++|| |||+. |++..
T Consensus 258 ~la~~~~--------------~~i~~~d~~~~~l~~l~~~~~-~~~~~~~~-~~~~v~~~~~S~pdG~~-la~~~----- 315 (1045)
T 1k32_A 258 RILFSKG--------------GSIYIFNPDTEKIEKIEIGDL-ESPEDRII-SIPSKFAEDFSPLDGDL-IAFVS----- 315 (1045)
T ss_dssp CEEEEET--------------TEEEEECTTTCCEEECCCCCC-CBCCSEEE-ECGGGGEEEEEECGGGC-EEEEE-----
T ss_pred EEEEEeC--------------CEEEEecCCceEeeeeccCcc-cccccccc-cccccceeeecCCCCCE-EEEEE-----
Confidence 9998741 379999997666655443211 11111100 00124578999 99998 77664
Q ss_pred CCccccCccceeeeecCCCCCCCCceEEeeccc-ccccceecCCCceEEEEeeccccceEEE-EEcCCCCCCCceeeecC
Q 005240 267 DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTW-LVCPGSKDVAPRVLFDR 344 (706)
Q Consensus 267 ~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~l~-~~d~~~~~~~~~~l~~~ 344 (706)
+..|+++++ .+++.+.++.... .+..+.|+ ||+.|++.+. ..+|| +++++++ +.+.+..
T Consensus 316 --------~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~----~~~l~~~~d~~~~--~~~~l~~- 376 (1045)
T 1k32_A 316 --------RGQAFIQDV---SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR----EGDFLGIYDYRTG--KAEKFEE- 376 (1045)
T ss_dssp --------TTEEEEECT---TSSBEEECSCCSCEEEEEECSS-SEEEEEEEET----TEEEEEEEETTTC--CEEECCC-
T ss_pred --------cCEEEEEcC---CCCceEEccCCCcceEEeeeEc-CCCeEEEEEC----CCceEEEEECCCC--CceEecC-
Confidence 124888888 6667666765555 78899999 9999998763 45799 9999874 4455541
Q ss_pred cccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhh
Q 005240 345 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 424 (706)
Q Consensus 345 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 424 (706)
... ....+.|||||++|++.... ..|+++|+++|+.+.+.....
T Consensus 377 ~~~------~~~~~~~SpDG~~la~~~~~---------------------~~v~~~d~~tg~~~~~~~~~~--------- 420 (1045)
T 1k32_A 377 NLG------NVFAMGVDRNGKFAVVANDR---------------------FEIMTVDLETGKPTVIERSRE--------- 420 (1045)
T ss_dssp CCC------SEEEEEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEEECSS---------
T ss_pred Ccc------ceeeeEECCCCCEEEEECCC---------------------CeEEEEECCCCceEEeccCCC---------
Confidence 111 11247899999999886521 257789999998877764321
Q ss_pred hccCCCceecccCCCEEEEEEecC------CCCcEEEEEECCCCceeEeec
Q 005240 425 LVFGQGEEDINLNQLKILTSKESK------TEITQYHILSWPLKKSSQITN 469 (706)
Q Consensus 425 ~~~~~~~~~~s~Dg~~l~~~~~~~------~~p~~v~~~~~~~~~~~~lt~ 469 (706)
.....+.|||||++|+++.... ..+..|++||+.+++...++.
T Consensus 421 --~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~ 469 (1045)
T 1k32_A 421 --AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT 469 (1045)
T ss_dssp --SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC
T ss_pred --CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeC
Confidence 1123579999999999887654 456789999999888666654
No 18
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=4.8e-21 Score=221.70 Aligned_cols=330 Identities=13% Similarity=0.152 Sum_probs=209.9
Q ss_pred CcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc--------------------ccccc
Q 005240 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL--------------------NAVFG 90 (706)
Q Consensus 31 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~--------------------~~~~~ 90 (706)
..+..++|||||++|||++..+. ......||++|+++++.++++......- ...+.
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~----~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDS----DRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSS----CTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCCceEecCCCEEEEEeccCC----CCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 35788999999999999874210 0224689999999999888875432100 01257
Q ss_pred ceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC---
Q 005240 91 SFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--- 166 (706)
Q Consensus 91 ~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g--- 166 (706)
.++|||||++|++.+. .+|+++++ ++
T Consensus 113 ~~~~SpDg~~l~~~~~--------------------------------------------------~~i~~~d~~~~~~~ 142 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG--------------------------------------------------GELYLYDLKQEGKA 142 (741)
T ss_dssp CCEECTTSSEEEEEET--------------------------------------------------TEEEEEESSSCSTT
T ss_pred eeEECCCCCEEEEEeC--------------------------------------------------CcEEEEECCCCCcc
Confidence 8999999999998742 57999999 55
Q ss_pred CceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCC---CCcccCcc-C
Q 005240 167 TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED---IPVCYNSV-R 241 (706)
Q Consensus 167 ~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~---~p~~~~~~-~ 241 (706)
+.++++.. ..+..++|||||++|+|.+. .+|++|++++++.++++....... .+.+.... .
T Consensus 143 ~~~~l~~~~~~~~~~~~SPDG~~la~~~~--------------~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~ 208 (741)
T 2ecf_A 143 AVRQLTHGEGFATDAKLSPKGGFVSFIRG--------------RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEM 208 (741)
T ss_dssp SCCBCCCSSSCEEEEEECTTSSEEEEEET--------------TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHS
T ss_pred eEEEcccCCcccccccCCCCCCEEEEEeC--------------CcEEEEecCCCCEEEeccCCccceeccccceeeeecc
Confidence 66777766 67889999999999999863 279999999988888766432100 00000000 0
Q ss_pred CCCcceeeecCCCceEEEEEeccCCCCcc---------------------ccCccceeeeecCCCCCC-CCceEEee---
Q 005240 242 EGMRSISWRADKPSTLYWVEAQDRGDANV---------------------EVSPRDIIYTQPAEPAEG-EKPEILHK--- 296 (706)
Q Consensus 242 ~g~~~~~~spdg~~~l~~~~~~~~~~~~~---------------------~~~~~~~l~~~d~~~~~~-~~~~~l~~--- 296 (706)
.....+.|||||+. |++.....+..... .......|+++|+ ++ ++.+.+..
T Consensus 209 ~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~---~~~~~~~~~~~~~~ 284 (741)
T 2ecf_A 209 DRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP---AEQAQTQWIDLGKE 284 (741)
T ss_dssp CCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS---STTCCCEEECCCSC
T ss_pred ccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC---CCCCceEEecCCCC
Confidence 01347899999998 87765322111000 0001226899998 67 77776652
Q ss_pred cccccccceecCCCceEEEEee-ccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccC
Q 005240 297 LDLRFRSVSWCDDSLALVNETW-YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 375 (706)
Q Consensus 297 ~~~~~~~~~wspDg~~l~~~~~-~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 375 (706)
....+..+.| |||+.|++... .......|+++|++++ +.+.++........ +....+.|||||+ +++....
T Consensus 285 ~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~--~~~~~~~~spdg~-~~~~~~~-- 356 (741)
T 2ecf_A 285 QDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN--QQRVLAHETSPTWV--PLHNSLRFLDDGS-ILWSSER-- 356 (741)
T ss_dssp SSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC--CEEEEEEEECSSCC--CCCSCCEECTTSC-EEEEECT--
T ss_pred cceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC--ceEEEEEcCCCCcC--CcCCceEECCCCe-EEEEecC--
Confidence 3456788999 99999998764 2335678999999985 44554332211000 0112477999999 4444321
Q ss_pred CcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCce-ecccCCCEEEEEEecCCC-CcE
Q 005240 376 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEE-DINLNQLKILTSKESKTE-ITQ 453 (706)
Q Consensus 376 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~s~Dg~~l~~~~~~~~~-p~~ 453 (706)
.....||.++++++ .+.|+..... ...+ .|||||+.|+++.+.... ...
T Consensus 357 ----------------~g~~~l~~~~~~~~-~~~l~~~~~~------------v~~~~~~s~dg~~l~~~~~~~~~~~~~ 407 (741)
T 2ecf_A 357 ----------------TGFQHLYRIDSKGK-AAALTHGNWS------------VDELLAVDEKAGLAYFRAGIESARESQ 407 (741)
T ss_dssp ----------------TSSCEEEEECSSSC-EEESCCSSSC------------EEEEEEEETTTTEEEEEECSSCTTCBE
T ss_pred ----------------CCccEEEEEcCCCC-eeeeeecceE------------EEeEeEEeCCCCEEEEEEeCCCCceEE
Confidence 12246888887655 5555433221 1123 599999999887764421 345
Q ss_pred EEEEECCCCceeEeec
Q 005240 454 YHILSWPLKKSSQITN 469 (706)
Q Consensus 454 v~~~~~~~~~~~~lt~ 469 (706)
||.+++.++..++|+.
T Consensus 408 l~~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 408 IYAVPLQGGQPQRLSK 423 (741)
T ss_dssp EEEEETTCCCCEECCC
T ss_pred EEEEEcCCCCeeeccc
Confidence 7777765655667764
No 19
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=2.6e-21 Score=207.37 Aligned_cols=255 Identities=18% Similarity=0.175 Sum_probs=183.5
Q ss_pred CCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCC
Q 005240 40 PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVP 119 (706)
Q Consensus 40 PDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~ 119 (706)
+.+++|+|++..+ ......+|+++|++++..+.++.+... +..++|||||++|++.+...
T Consensus 141 ~~~~~l~~~s~~~----~~~~~~~i~i~d~~g~~~~~l~~~~~~-----v~~~~~Spdg~~la~~s~~~----------- 200 (415)
T 2hqs_A 141 AFRTRIAYVVQTN----GGQFPYELRVSDYDGYNQFVVHRSPQP-----LMSPAWSPDGSKLAYVTFES----------- 200 (415)
T ss_dssp CTTCEEEEEEECS----SSSCCEEEEEEETTSCSCEEEEEESSC-----EEEEEECTTSSEEEEEECTT-----------
T ss_pred cCCCEEEEEEecC----CCCccceEEEEcCCCCCCEEEeCCCCc-----ceeeEEcCCCCEEEEEEecC-----------
Confidence 3489999988521 001127999999998888888755443 77899999999999986321
Q ss_pred CCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCC-ceEeeeeeCCCCcEEEEEeeccC
Q 005240 120 LGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRP 197 (706)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~ 197 (706)
....|+++|+ +|+.+.+... ..+..++|||||++|+|+.....
T Consensus 201 -----------------------------------~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g 245 (415)
T 2hqs_A 201 -----------------------------------GRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTG 245 (415)
T ss_dssp -----------------------------------SSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred -----------------------------------CCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCC
Confidence 1158999999 5677777655 67889999999999998876432
Q ss_pred cccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccce
Q 005240 198 YSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI 277 (706)
Q Consensus 198 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~ 277 (706)
..+|++|++.+++.++++..... ...+.|||||+. |++....++ ...
T Consensus 246 ----------~~~i~~~d~~~~~~~~l~~~~~~-------------~~~~~~spdg~~-l~~~s~~~g---------~~~ 292 (415)
T 2hqs_A 246 ----------SLNLYVMDLASGQIRQVTDGRSN-------------NTEPTWFPDSQN-LAFTSDQAG---------RPQ 292 (415)
T ss_dssp ----------SCEEEEEETTTCCEEECCCCSSC-------------EEEEEECTTSSE-EEEEECTTS---------SCE
T ss_pred ----------CceEEEEECCCCCEEeCcCCCCc-------------ccceEECCCCCE-EEEEECCCC---------CcE
Confidence 25799999998887777654321 336799999998 777753221 125
Q ss_pred eeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCc
Q 005240 278 IYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPM 357 (706)
Q Consensus 278 l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~ 357 (706)
||++|+ ++++.+.++.....+..+.|||||+.|++.+... +...|+++|++++ +.+.+.... ....
T Consensus 293 i~~~d~---~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d~~~~--~~~~l~~~~--------~~~~ 358 (415)
T 2hqs_A 293 VYKVNI---NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATG--GVQVLSSTF--------LDET 358 (415)
T ss_dssp EEEEET---TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS-SCEEEEEEETTTC--CEEECCCSS--------SCEE
T ss_pred EEEEEC---CCCCEEEEecCCCcccCeEECCCCCEEEEEECcC-CceEEEEEECCCC--CEEEecCCC--------CcCC
Confidence 899998 6777777776666777899999999999876433 4568999999984 345553321 1234
Q ss_pred eEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeeccc
Q 005240 358 MTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (706)
Q Consensus 358 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (706)
+.|+|||++|++.... +....|+++|+++++.++|...+
T Consensus 359 ~~~spdg~~l~~~s~~------------------~~~~~l~~~d~~g~~~~~l~~~~ 397 (415)
T 2hqs_A 359 PSLAPNGTMVIYSSSQ------------------GMGSVLNLVSTDGRFKARLPATD 397 (415)
T ss_dssp EEECTTSSEEEEEEEE------------------TTEEEEEEEETTSCCEEECCCSS
T ss_pred eEEcCCCCEEEEEEcC------------------CCccEEEEEECCCCcEEEeeCCC
Confidence 7899999999887643 12235888998877766665443
No 20
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=4.9e-21 Score=205.16 Aligned_cols=233 Identities=15% Similarity=0.130 Sum_probs=175.1
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
..|++.|++. +..+.++... ..+..++|||||++|||.+.. .+...|+++|+++++.++++.....
T Consensus 159 ~~i~i~d~~g----~~~~~l~~~~--~~v~~~~~Spdg~~la~~s~~-------~~~~~i~~~d~~tg~~~~l~~~~~~- 224 (415)
T 2hqs_A 159 YELRVSDYDG----YNQFVVHRSP--QPLMSPAWSPDGSKLAYVTFE-------SGRSALVIQTLANGAVRQVASFPRH- 224 (415)
T ss_dssp EEEEEEETTS----CSCEEEEEES--SCEEEEEECTTSSEEEEEECT-------TSSCEEEEEETTTCCEEEEECCSSC-
T ss_pred ceEEEEcCCC----CCCEEEeCCC--CcceeeEEcCCCCEEEEEEec-------CCCcEEEEEECCCCcEEEeecCCCc-
Confidence 5788999865 7777776433 348899999999999998742 3457999999999998888755442
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
+..+.|||||++|+|..... +..+||++++
T Consensus 225 ----~~~~~~spdg~~la~~~~~~----------------------------------------------g~~~i~~~d~ 254 (415)
T 2hqs_A 225 ----NGAPAFSPDGSKLAFALSKT----------------------------------------------GSLNLYVMDL 254 (415)
T ss_dssp ----EEEEEECTTSSEEEEEECTT----------------------------------------------SSCEEEEEET
T ss_pred ----ccCEEEcCCCCEEEEEEecC----------------------------------------------CCceEEEEEC
Confidence 67899999999999875321 1257999999
Q ss_pred -CCCceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCC
Q 005240 165 -DGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (706)
Q Consensus 165 -~g~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~ 242 (706)
+++.++++.. ..+..++|||||++|++.+.... ..+|++|++++++.++++....
T Consensus 255 ~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g----------~~~i~~~d~~~~~~~~l~~~~~------------- 311 (415)
T 2hqs_A 255 ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAG----------RPQVYKVNINGGAPQRITWEGS------------- 311 (415)
T ss_dssp TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSCCEECCCSSS-------------
T ss_pred CCCCEEeCcCCCCcccceEECCCCCEEEEEECCCC----------CcEEEEEECCCCCEEEEecCCC-------------
Confidence 5577888766 67889999999999999886432 2489999999887777654321
Q ss_pred CCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeecccc
Q 005240 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS 322 (706)
Q Consensus 243 g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~ 322 (706)
....+.|||||+. |++....++ ...|+++|+ ++++.+.|+... .+..+.|+|||+.|++.+... +
T Consensus 312 ~~~~~~~spdG~~-l~~~~~~~g---------~~~i~~~d~---~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~-~ 376 (415)
T 2hqs_A 312 QNQDADVSSDGKF-MVMVSSNGG---------QQHIAKQDL---ATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQG-M 376 (415)
T ss_dssp EEEEEEECTTSSE-EEEEEECSS---------CEEEEEEET---TTCCEEECCCSS-SCEEEEECTTSSEEEEEEEET-T
T ss_pred cccCeEECCCCCE-EEEEECcCC---------ceEEEEEEC---CCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCC-C
Confidence 1336799999998 776643221 125899999 677777776554 788899999999999886443 4
Q ss_pred ceEEEEEcCCCCCCCceee
Q 005240 323 QTRTWLVCPGSKDVAPRVL 341 (706)
Q Consensus 323 ~~~l~~~d~~~~~~~~~~l 341 (706)
...||++|++++ ..+.|
T Consensus 377 ~~~l~~~d~~g~--~~~~l 393 (415)
T 2hqs_A 377 GSVLNLVSTDGR--FKARL 393 (415)
T ss_dssp EEEEEEEETTSC--CEEEC
T ss_pred ccEEEEEECCCC--cEEEe
Confidence 568999999873 44555
No 21
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=1.1e-20 Score=218.08 Aligned_cols=338 Identities=11% Similarity=0.032 Sum_probs=204.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
....++|||||+.+ ++.. + ..|+++|+++++.+++...... ....+..++|||||++|++.+......
T Consensus 18 ~~~~~~~spdg~~~-~~~~--------d--g~i~~~d~~~g~~~~~~~~~~~-~~~~v~~~~~SpDg~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 18 HDPEAKWISDTEFI-YREQ--------K--GTVRLWNVETNTSTVLIEGKKI-ESLRAIRYEISPDREYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCCBSSSSCBC-CCCS--------S--SCEEEBCGGGCCCEEEECTTTT-TTTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred cccccEEcCCCcEE-EEeC--------C--CCEEEEECCCCcEEEEeccccc-cccccceEEECCCCCEEEEEecCccce
Confidence 46789999999965 3321 2 3899999999988777643321 001267899999999999986432110
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCC-c---eEeeeeeCCCC
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-A---VYTAVEPSPDQ 186 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~-~---~~~~~~~SpDG 186 (706)
. ......|+++++ +|+.++++.. . .+..++|||||
T Consensus 86 ~----------------------------------------~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG 125 (723)
T 1xfd_A 86 Q----------------------------------------HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG 125 (723)
T ss_dssp S----------------------------------------SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST
T ss_pred e----------------------------------------ecceeeEEEEECCCCceEeccCCccccccccccEECCCC
Confidence 0 001268999999 5577777654 2 36789999999
Q ss_pred cEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCC----CCcccCcc--CCCCcceeeecCCCceEEEE
Q 005240 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED----IPVCYNSV--REGMRSISWRADKPSTLYWV 260 (706)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~----~p~~~~~~--~~g~~~~~~spdg~~~l~~~ 260 (706)
++|+|.+.. +|++|++++++.++++....... .+.++... ......+.|||||+. |++.
T Consensus 126 ~~la~~~~~--------------~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~-la~~ 190 (723)
T 1xfd_A 126 QQLIFIFEN--------------NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR-LAYA 190 (723)
T ss_dssp TCEEEEETT--------------EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE-EEEE
T ss_pred CEEEEEECC--------------eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCE-EEEE
Confidence 999998752 79999999888887765422110 00000000 001246899999998 7776
Q ss_pred EeccCCCCcc----------------------ccCccceeeeecCCCCCCCCc-eEEeec------ccccccceecCCCc
Q 005240 261 EAQDRGDANV----------------------EVSPRDIIYTQPAEPAEGEKP-EILHKL------DLRFRSVSWCDDSL 311 (706)
Q Consensus 261 ~~~~~~~~~~----------------------~~~~~~~l~~~d~~~~~~~~~-~~l~~~------~~~~~~~~wspDg~ 311 (706)
.......... .......|+++|+ ++++. ++|... ...+..+.|||||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~---~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~ 267 (723)
T 1xfd_A 191 AINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL---NGPTHDLEMMPPDDPRMREYYITMVKWATSTK 267 (723)
T ss_dssp EEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES---SSSCCCEECCCCCCGGGSSEEEEEEEESSSSE
T ss_pred EECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC---CCCceeEEeeCCccCCCccceeEEEEEeCCCe
Confidence 5432110000 0011236999998 66663 556543 45567899999999
Q ss_pred eEEEEeeccccceEEEEEcCCCCCCCceeeecCc-ccccccCCCCCceEeccCCCEEEEe-eeccCCcceEEEEecCCCC
Q 005240 312 ALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FENVYSDPGSPMMTRTSTGTNVIAK-IKKENDEQIYILLNGRGFT 389 (706)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~~~~~~~~~~~~g~~ 389 (706)
.|++..........|+++|++++ +...+.... -..+. .....+.|||||++|++. .... +.
T Consensus 268 ~l~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~------------~~- 330 (723)
T 1xfd_A 268 VAVTWLNRAQNVSILTLCDATTG--VCTKKHEDESEAWLH--RQNEEPVFSKDGRKFFFIRAIPQ------------GG- 330 (723)
T ss_dssp EEEEEEETTSCEEEEEEEETTTC--CEEEEEEEECSSCCC--CCCCCCEECTTSCSEEEEEEECC------------SS-
T ss_pred EEEEEEcCCCCeEEEEEEeCCCC--cceEEEEeccCCEEe--ccCCCceEcCCCCeEEEEEeccc------------CC-
Confidence 88776554445578999999985 344443211 11110 001247899999999886 3221 10
Q ss_pred CCCCCCceeeee-cCCCc---eeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCC-CCcEEEEEECCCC-c
Q 005240 390 PEGNIPFLDLFD-INTGS---KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT-EITQYHILSWPLK-K 463 (706)
Q Consensus 390 ~~~~~~~l~~~d-~~~g~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~-~p~~v~~~~~~~~-~ 463 (706)
......|+.+| ..+++ .+.|+..... + ...+.|||||+.|+|+..... .-..||.+++.++ +
T Consensus 331 -~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~-----~------~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 398 (723)
T 1xfd_A 331 -RGKFYHITVSSSQPNSSNDNIQSITSGDWD-----V------TKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFN 398 (723)
T ss_dssp -SSCEEEEEEECSSCCSSSCCCCBSCCSSSC-----E------EEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCC
T ss_pred -CcceeEEEEEeccCCCCccceeEeecCCeE-----E------EeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCC
Confidence 01133578888 55565 5555432211 0 012589999999998776531 3345666665554 3
Q ss_pred eeEee
Q 005240 464 SSQIT 468 (706)
Q Consensus 464 ~~~lt 468 (706)
.+.|+
T Consensus 399 ~~~l~ 403 (723)
T 1xfd_A 399 RQCLS 403 (723)
T ss_dssp CBCSS
T ss_pred cceec
Confidence 44454
No 22
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=2.4e-20 Score=197.94 Aligned_cols=310 Identities=9% Similarity=0.005 Sum_probs=199.7
Q ss_pred ceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchh
Q 005240 61 KLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDN 140 (706)
Q Consensus 61 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (706)
..++|+....+++.+++|..........+..++|||||++|+|.+...
T Consensus 10 ~~~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-------------------------------- 57 (388)
T 3pe7_A 10 TFDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFD-------------------------------- 57 (388)
T ss_dssp CCEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT--------------------------------
T ss_pred cceEEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCC--------------------------------
Confidence 367887666677889998665431111133489999999999986421
Q ss_pred ccCCchhhhhhhhcccceEEEEcc-CCCceecCCC-c-eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC
Q 005240 141 LLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-A-VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (706)
Q Consensus 141 ~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~-~-~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 217 (706)
+..+||++++ +|+.++++.. . ....+.|||||++|+|.... ..|++|+++
T Consensus 58 --------------g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-------------~~l~~~d~~ 110 (388)
T 3pe7_A 58 --------------GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-------------RNLMRVDLA 110 (388)
T ss_dssp --------------SSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-------------TEEEEEETT
T ss_pred --------------CCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-------------CeEEEEECC
Confidence 1258999999 4588888876 2 23367899999999998854 379999999
Q ss_pred CCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCC-C---------ccccCccceeeeecCCCCC
Q 005240 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD-A---------NVEVSPRDIIYTQPAEPAE 287 (706)
Q Consensus 218 ~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~-~---------~~~~~~~~~l~~~d~~~~~ 287 (706)
+++.+.+...+.... ....+.++|||+. |+.+....... . .........|+++|+ +
T Consensus 111 ~g~~~~~~~~~~~~~----------~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~---~ 176 (388)
T 3pe7_A 111 TLEENVVYQVPAEWV----------GYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL---K 176 (388)
T ss_dssp TCCEEEEEECCTTEE----------EEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET---T
T ss_pred CCcceeeeechhhcc----------cccceeECCCCCe-eccccccCcccccccccchhhhhhccCCcceEEEEEC---C
Confidence 888777765432100 0012234899987 55432211100 0 000112357999999 7
Q ss_pred CCCceEEeecccccccceecC-CCceEEEEeecc--ccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCC
Q 005240 288 GEKPEILHKLDLRFRSVSWCD-DSLALVNETWYK--TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG 364 (706)
Q Consensus 288 ~~~~~~l~~~~~~~~~~~wsp-Dg~~l~~~~~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg 364 (706)
+++.+.++.....+..+.||| ||+.|+|..... ....+||.+|++++ +.+.++...... ....+.|||||
T Consensus 177 ~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~-----~~~~~~~spdg 249 (388)
T 3pe7_A 177 TGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTHAEGE-----SCTHEFWVPDG 249 (388)
T ss_dssp TCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCCCTTE-----EEEEEEECTTS
T ss_pred CCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeCCCCc-----ccccceECCCC
Confidence 888888887777788999999 999999876432 12457999999873 456664432100 01236799999
Q ss_pred CEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEE
Q 005240 365 TNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTS 444 (706)
Q Consensus 365 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~ 444 (706)
++|++..... + .....|+++|+++|+.+.+....+. ...........|||||++|+++
T Consensus 250 ~~l~~~~~~~------------~----~~~~~l~~~d~~~g~~~~l~~~~~~------~~~~~~~~~~~~spdg~~l~~~ 307 (388)
T 3pe7_A 250 SALVYVSYLK------------G----SPDRFIYSADPETLENRQLTSMPAC------SHLMSNYDGSLMVGDGSDAPVD 307 (388)
T ss_dssp SCEEEEEEET------------T----CCCEEEEEECTTTCCEEEEEEECCE------EEEEECTTSSEEEEEECCC---
T ss_pred CEEEEEecCC------------C----CCcceEEEEecCCCceEEEEcCCCc------eeeeecCCCCeEccCCCcceeE
Confidence 9998876431 0 1112488999999988777654320 0000001124799999999987
Q ss_pred Eec-----CCCCcEEEEEECCCCceeEeecCCC
Q 005240 445 KES-----KTEITQYHILSWPLKKSSQITNFPH 472 (706)
Q Consensus 445 ~~~-----~~~p~~v~~~~~~~~~~~~lt~~~~ 472 (706)
... ......|+++|+.+++.++|+....
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 340 (388)
T 3pe7_A 308 VQDDSGYKIENDPFLYVFNMKNGTQHRVARHDT 340 (388)
T ss_dssp ---------CCCCEEEEEETTTTEEEEEEECCC
T ss_pred eeeccccccCCCCEEEEEeccCCceEEeccccC
Confidence 543 2566789999999999999987543
No 23
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.86 E-value=8.3e-20 Score=190.66 Aligned_cols=309 Identities=13% Similarity=0.105 Sum_probs=196.4
Q ss_pred CCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCC
Q 005240 29 DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (706)
Q Consensus 29 ~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~ 108 (706)
....+..|+| ||++|||+....+... .....+||++++++++.+++ . .+..+.|||||++|+|.+...
T Consensus 13 ~~~~~~~~~~--dG~~i~~~~~~~~~~~-~~~~~~l~~~d~~~~~~~~l----~-----~~~~~~~SpDg~~la~~~~~~ 80 (347)
T 2gop_A 13 KFAYLSDPRT--KGELVAYVLTKANLKD-NKYENTIVIENLKNNARRFI----E-----NATMPRISPDGKKIAFMRANE 80 (347)
T ss_dssp CSCEEEEEEE--ETTEEEEEEEEEETTT-TEEEEEEEEEETTTCCEEEE----E-----SCEEEEECTTSSEEEEEEEET
T ss_pred eeEEcccceE--CCcEEEEEEeecCccc-CCccceEEEEeCCCCceEEc----c-----cCCCeEECCCCCEEEEEEecc
Confidence 3345778899 9999999876322111 13467899999999998887 1 167889999999999986421
Q ss_pred CCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC-CCceecCCCceEeeeeeCCCCc
Q 005240 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GTAKDFGTPAVYTAVEPSPDQK 187 (706)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~-g~~~~lt~~~~~~~~~~SpDG~ 187 (706)
.. ...+||+++++ |+.++++....+..++|||||+
T Consensus 81 ~~--------------------------------------------~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~ 116 (347)
T 2gop_A 81 EK--------------------------------------------KVSEIWVADLETLSSKKILEAKNIRSLEWNEDSR 116 (347)
T ss_dssp TT--------------------------------------------TEEEEEEEETTTTEEEEEEEESEEEEEEECTTSS
T ss_pred CC--------------------------------------------CcceEEEEECCCCceEEEEcCCCccceeECCCCC
Confidence 00 12689999995 4777777652288999999999
Q ss_pred EEEEEeeccCcc--cc----cccc--------cccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecC
Q 005240 188 YVLITSMHRPYS--YK----VPCA--------RFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (706)
Q Consensus 188 ~i~~~~~~~~~~--~~----~~~~--------~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spd 252 (706)
+|+|.+...... .. .++. ....+|+++++++++. +.++. + . ...+.||||
T Consensus 117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~-------------~~~~~~spd 181 (347)
T 2gop_A 117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-R-------------FSSGIWHRD 181 (347)
T ss_dssp EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-T-------------TCEEEEETT
T ss_pred EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-C-------------cccccCCCC
Confidence 999987541100 00 0000 0135799999998877 77765 2 1 236799999
Q ss_pred CCceEEEEEeccCCCCccccCc-cceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccc----cceEEE
Q 005240 253 KPSTLYWVEAQDRGDANVEVSP-RDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT----SQTRTW 327 (706)
Q Consensus 253 g~~~l~~~~~~~~~~~~~~~~~-~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~----~~~~l~ 327 (706)
| ++++...+.... ... ...||.+| +++.+.|+.. .... .+||||+.|++.+.... ...+||
T Consensus 182 g---~~~~~~~~~~~~---~~~~~~~l~~~d-----~~~~~~l~~~-~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~ 247 (347)
T 2gop_A 182 K---IVVNVPHREIIP---QYFKFWDIYIWE-----DGKEEKMFEK-VSFY--AVDSDGERILLYGKPEKKYMSEHNKLY 247 (347)
T ss_dssp E---EEEEEECCCSSC---CSSCCEEEEEEE-----TTEEEEEEEE-ESEE--EEEECSSCEEEEECCSSSCCCSSCEEE
T ss_pred e---EEEEEecccccc---cccccccEEEeC-----CCceEEeccC-ccee--eECCCCCEEEEEEccccCCccccceEE
Confidence 9 455543322100 001 23577775 3566777655 4333 34999999998764331 246899
Q ss_pred EEcCCCCCCCceeeecCcccccccCCCCCc-eEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCc
Q 005240 328 LVCPGSKDVAPRVLFDRVFENVYSDPGSPM-MTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 406 (706)
Q Consensus 328 ~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~ 406 (706)
++| + ++.+.++...-.. ... +.|+ || +++.... .....|| ++ +|+
T Consensus 248 ~~d--~--~~~~~l~~~~~~~------~~~~~~~s-dg--~~~~~~~------------------~~~~~l~-~~--~g~ 293 (347)
T 2gop_A 248 IYD--G--KEVMGILDEVDRG------VGQAKIKD-GK--VYFTLFE------------------EGSVNLY-IW--DGE 293 (347)
T ss_dssp EEC--S--SCEEESSTTCCSE------EEEEEEET-TE--EEEEEEE------------------TTEEEEE-EE--SSS
T ss_pred EEC--C--CceEeccccCCcc------cCCccEEc-Cc--EEEEEec------------------CCcEEEE-Ec--CCc
Confidence 999 4 3445554321111 111 5678 87 5555432 1233577 77 466
Q ss_pred eeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecCCCCC
Q 005240 407 KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNFPHPY 474 (706)
Q Consensus 407 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~~~~ 474 (706)
.+++...++. ...++|++ .++++.++...|++||.++ ++.++|+..|..+
T Consensus 294 ~~~~~~~~~~------------v~~~~~s~---~~~~~~~~~~~~~~l~~~~---g~~~~lt~~n~~~ 343 (347)
T 2gop_A 294 IKPIAKGRHW------------IMGFDVDE---IVVYLKETATRLRELFTWD---GEEKQLTDYNDPI 343 (347)
T ss_dssp EEEEECSSSE------------EEEEEESS---SEEEEEECSSSCCEEEEES---SSEEECCCTTSTT
T ss_pred eEEEecCCCe------------EEeeeeeC---cEEEEEcCCCChHHheEeC---CcEEEeccccHhH
Confidence 6666543221 12357777 5888889999999999997 7788999887654
No 24
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=3.2e-19 Score=180.83 Aligned_cols=262 Identities=12% Similarity=0.043 Sum_probs=182.8
Q ss_pred ccceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCC-CceeecccCCC
Q 005240 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET-GEAKPLFESPD 82 (706)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~-g~~~~lt~~~~ 82 (706)
...|++.++.. ++.+++.... ..+..++|||||++|++.. ...|+++|+++ ++.+++.....
T Consensus 21 ~~~i~~~d~~~----~~~~~~~~~~--~~v~~~~~spdg~~l~~~~-----------~~~i~~~d~~~~~~~~~~~~~~~ 83 (297)
T 2ojh_A 21 RSSIEIFNIRT----RKMRVVWQTP--ELFEAPNWSPDGKYLLLNS-----------EGLLYRLSLAGDPSPEKVDTGFA 83 (297)
T ss_dssp CEEEEEEETTT----TEEEEEEEES--SCCEEEEECTTSSEEEEEE-----------TTEEEEEESSSCCSCEECCCTTC
T ss_pred ceeEEEEeCCC----CceeeeccCC--cceEeeEECCCCCEEEEEc-----------CCeEEEEeCCCCCCceEeccccc
Confidence 35689999977 8777776433 3488999999999999964 24899999999 88888764332
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEE
Q 005240 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (706)
Q Consensus 83 ~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 162 (706)
...+..+.|||||++|++...... ....||.+
T Consensus 84 ---~~~~~~~~~spdg~~l~~~~~~~~---------------------------------------------~~~~l~~~ 115 (297)
T 2ojh_A 84 ---TICNNDHGISPDGALYAISDKVEF---------------------------------------------GKSAIYLL 115 (297)
T ss_dssp ---CCBCSCCEECTTSSEEEEEECTTT---------------------------------------------SSCEEEEE
T ss_pred ---cccccceEECCCCCEEEEEEeCCC---------------------------------------------CcceEEEE
Confidence 112668999999999998753211 12689999
Q ss_pred ccC-CCceecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccC
Q 005240 163 SLD-GTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (706)
Q Consensus 163 ~l~-g~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~ 241 (706)
++. ++.+.+........++|||||++|+|+..... ...|+.+++++++.+.+.....
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----------~~~l~~~~~~~~~~~~~~~~~~------------ 173 (297)
T 2ojh_A 116 PSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQ----------VFDIYSMDIDSGVETRLTHGEG------------ 173 (297)
T ss_dssp ETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETT----------EEEEEEEETTTCCEEECCCSSS------------
T ss_pred ECCCCceEEeecCCCccceEECCCCCEEEEEECCCC----------ceEEEEEECCCCcceEcccCCC------------
Confidence 985 47777776655778899999999998776532 2367777777777776655431
Q ss_pred CCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccc
Q 005240 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT 321 (706)
Q Consensus 242 ~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~ 321 (706)
....+.|+|||+. |++....++ ...||.++. .++..+.+......+..+.|+|||+.|++.+....
T Consensus 174 -~~~~~~~s~dg~~-l~~~~~~~~---------~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 174 -RNDGPDYSPDGRW-IYFNSSRTG---------QMQIWRVRV---DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp -CEEEEEECTTSSE-EEEEECTTS---------SCEEEEEET---TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETT
T ss_pred -ccccceECCCCCE-EEEEecCCC---------CccEEEECC---CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCC
Confidence 1347899999997 766543221 124777776 56677777766677788999999999998764422
Q ss_pred -------cceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeee
Q 005240 322 -------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (706)
Q Consensus 322 -------~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 372 (706)
....|+++|++++ +...+...... ......+.|+|||++|++...
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~--~~~~~~~~~~~----~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGG--NVETLFDLFGG----QGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSC--SCEEEEEEEES----TTTSCSCCBCTTSSEEEEEEE
T ss_pred CCcccccCceEEEEEecCCC--CceeeeccCCC----CcccccceECCCCCEEEEEEe
Confidence 2367999999884 34444321000 001223678999999988764
No 25
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=6.3e-20 Score=211.49 Aligned_cols=331 Identities=10% Similarity=-0.006 Sum_probs=198.9
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~ 112 (706)
...++|||||+ +++.. ...+||++|+++++.++++...... ...+..++|||||++|+|.+.....-
T Consensus 18 ~~~~~~s~dg~-~~~~~----------~d~~i~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~SpDg~~la~~~~~~~~~- 84 (719)
T 1z68_A 18 TFFPNWISGQE-YLHQS----------ADNNIVLYNIETGQSYTILSNRTMK-SVNASNYGLSPDRQFVYLESDYSKLW- 84 (719)
T ss_dssp CCCCEESSSSE-EEEEC----------TTSCEEEEESSSCCEEEEECHHHHH-TTTCSEEEECTTSSEEEEEEEEEECS-
T ss_pred CCccEECCCCe-EEEEc----------CCCCEEEEEcCCCcEEEEEcccccc-ccceeeEEECCCCCeEEEEecCceeE-
Confidence 34789999995 44542 2358999999999998887432110 00156899999999999975421000
Q ss_pred CCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC-CCc---eecCCCceEeeeeeCCCCcE
Q 005240 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GTA---KDFGTPAVYTAVEPSPDQKY 188 (706)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~-g~~---~~lt~~~~~~~~~~SpDG~~ 188 (706)
.+....+|++++++ |+. ++++ ..+..++|||||++
T Consensus 85 ---------------------------------------~~s~~~~i~~~d~~~g~~~~~~~l~--~~~~~~~~SPDG~~ 123 (719)
T 1z68_A 85 ---------------------------------------RYSYTATYYIYDLSNGEFVRGNELP--RPIQYLCWSPVGSK 123 (719)
T ss_dssp ---------------------------------------SSCEEEEEEEEETTTTEECCSSCCC--SSBCCEEECSSTTC
T ss_pred ---------------------------------------EeecceEEEEEECCCCccccceecC--cccccceECCCCCE
Confidence 00023689999994 565 5554 34678999999999
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCC----CCCcccCcc--CCCCcceeeecCCCceEEEEEe
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE----DIPVCYNSV--REGMRSISWRADKPSTLYWVEA 262 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~----~~p~~~~~~--~~g~~~~~~spdg~~~l~~~~~ 262 (706)
|+|... .+|++|++.+++.++++...... ..+.++... ......++|||||+. |++...
T Consensus 124 la~~~~--------------~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~-la~~~~ 188 (719)
T 1z68_A 124 LAYVYQ--------------NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF-LAYAEF 188 (719)
T ss_dssp EEEEET--------------TEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE-EEEEEE
T ss_pred EEEEEC--------------CeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCE-EEEEEE
Confidence 999852 37999999988877776432111 000000000 001136899999998 887754
Q ss_pred ccCCCCcc----------------------ccCccceeeeecCCCCCCCCce---EEe------ecccccccceecCCCc
Q 005240 263 QDRGDANV----------------------EVSPRDIIYTQPAEPAEGEKPE---ILH------KLDLRFRSVSWCDDSL 311 (706)
Q Consensus 263 ~~~~~~~~----------------------~~~~~~~l~~~d~~~~~~~~~~---~l~------~~~~~~~~~~wspDg~ 311 (706)
.+...... .......|+++|+ ++++.. ++. .....+..+.||||++
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 189 NDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT---TYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp ECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES---SCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred CCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC---CCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 32211100 0012236889998 555542 332 2345678899999987
Q ss_pred eEEEEeeccccceEEEEEc----CCCCCCCceeee----cCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEE
Q 005240 312 ALVNETWYKTSQTRTWLVC----PGSKDVAPRVLF----DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILL 383 (706)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~d----~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 383 (706)
.++...+......+||++| ++++ +.+.++ +..-..+... ....+.|||||+.|++.....
T Consensus 266 ~~~~~~~~~~~~~~l~~~d~~~~~~~g--~~~~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~--------- 333 (719)
T 1z68_A 266 VCLQWLKRVQNVSVLSICDFREDWQTW--DCPKTQEHIEESRTGWAGGF-FVSTPVFSYDAISYYKIFSDK--------- 333 (719)
T ss_dssp EEEEEEESSTTEEEEEEEEECSSSSSE--ECCGGGEEEEECSSSCSSSS-SCCCCEECTTSSCEEEEEECT---------
T ss_pred EEEEEeccccCeEEEEEEcccCCCCCC--ceEEEEecccccCCceEccc-cCCccEECCCCCeEEEEEEcc---------
Confidence 5554333344556899999 7774 344443 1211111100 001367999999887753221
Q ss_pred ecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEec---CCCCcEEEEEECC
Q 005240 384 NGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKES---KTEITQYHILSWP 460 (706)
Q Consensus 384 ~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~---~~~p~~v~~~~~~ 460 (706)
....+|+++|+++++.+.|+..... ...+.++ |+++|+|+... ......+|.+++.
T Consensus 334 --------~g~~~l~~~~~~~~~~~~lt~~~~~------------v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~ 392 (719)
T 1z68_A 334 --------DGYKHIHYIKDTVENAIQITSGKWE------------AINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIG 392 (719)
T ss_dssp --------TSCEEEEEESSCSTTCEECSCSSSC------------EEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECS
T ss_pred --------CCceEEEEEECCCCceEecccCceE------------EEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCC
Confidence 1234688899888876666543221 1124556 99999998765 1344568888876
Q ss_pred CC--ceeEee
Q 005240 461 LK--KSSQIT 468 (706)
Q Consensus 461 ~~--~~~~lt 468 (706)
++ +.+.|+
T Consensus 393 ~g~~~~~~l~ 402 (719)
T 1z68_A 393 SYPPSKKCVT 402 (719)
T ss_dssp SSSCCEEESS
T ss_pred CCCCCceecc
Confidence 65 345555
No 26
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=2.6e-18 Score=197.62 Aligned_cols=312 Identities=14% Similarity=0.161 Sum_probs=192.9
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCC-----Cceeeccc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET-----GEAKPLFE 79 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~-----g~~~~lt~ 79 (706)
..|++.++.. ++.++++... ..+..++|||||++|||+.+ .+||++++++ ++.++++.
T Consensus 101 ~~i~~~d~~~----~~~~~l~~~~--~~~~~~~~SpdG~~la~~~~-----------~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 101 GGLVGFDMLA----RKVTYLFDTN--EETASLDFSPVGDRVAYVRN-----------HNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp TEEEEEETTT----TEEEEEECCT--TCCTTCEECTTSSEEEEEET-----------TEEEEEECBCTTSCCCCCEESCS
T ss_pred CEEEEEECCC----CceEEccCCc--ccccCCcCCCCCCEEEEEEC-----------CeEEEEecCcccccCCCcEEecc
Confidence 3688899876 8877776432 34889999999999999642 5899999999 99888876
Q ss_pred CCCccccc----------cccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhh
Q 005240 80 SPDICLNA----------VFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDES 149 (706)
Q Consensus 80 ~~~~~~~~----------~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 149 (706)
.....+.. .+..+.|||||++|++.+.+...... ... ........... ...|...+.
T Consensus 164 ~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~-~~~------~~~~~~~~~~~------~~~y~~~g~ 230 (706)
T 2z3z_A 164 DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKP-TPI------VDYHPLEAESK------PLYYPMAGT 230 (706)
T ss_dssp CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCC-EEE------EECCSSSCEEE------EECCCBTTS
T ss_pred CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCce-EEe------eccCCCCCceE------EeeCCCCCC
Confidence 54321100 03688999999999998632221100 000 00000000000 001111110
Q ss_pred hhhhcccceEEEEccC-CCceecCCC----ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCC-eeEE
Q 005240 150 LFDYYTTAQLVLGSLD-GTAKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRE 223 (706)
Q Consensus 150 ~~~~~~~~~l~~~~l~-g~~~~lt~~----~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~ 223 (706)
.....+|+++|++ |+.+.+... ..+..++|||||++|++........ ...|++||+.++ ..+.
T Consensus 231 ---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~--------~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 231 ---PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQN--------ECKVNAYDAETGRFVRT 299 (706)
T ss_dssp ---CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSC--------EEEEEEEETTTCCEEEE
T ss_pred ---CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCC--------eeEEEEEECCCCceeeE
Confidence 0133689999994 466666532 4678999999999999877553211 358999999977 6666
Q ss_pred cccCCCCCCCCcccCccCCCCcceeeec--CCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeeccccc
Q 005240 224 LCDLPPAEDIPVCYNSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF 301 (706)
Q Consensus 224 l~~~~~~~~~p~~~~~~~~g~~~~~~sp--dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 301 (706)
+....... +. .....+.||| ||+. | +....++ ...||.++. +++..+.|+.....+
T Consensus 300 ~~~~~~~~----~~----~~~~~~~~sp~~dg~~-l-~~~~~~g---------~~~l~~~~~---~~~~~~~l~~~~~~v 357 (706)
T 2z3z_A 300 LFVETDKH----YV----EPLHPLTFLPGSNNQF-I-WQSRRDG---------WNHLYLYDT---TGRLIRQVTKGEWEV 357 (706)
T ss_dssp EEEEECSS----CC----CCCSCCEECTTCSSEE-E-EEECTTS---------SCEEEEEET---TSCEEEECCCSSSCE
T ss_pred EEEccCCC----eE----CccCCceeecCCCCEE-E-EEEccCC---------ccEEEEEEC---CCCEEEecCCCCeEE
Confidence 54321110 00 0013569999 9973 4 4433321 124888876 566677777666656
Q ss_pred cc-ceecCCCceEEEEeeccc-cceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcce
Q 005240 302 RS-VSWCDDSLALVNETWYKT-SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 379 (706)
Q Consensus 302 ~~-~~wspDg~~l~~~~~~~~-~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 379 (706)
.. +.|+|||+.|++.....+ ...+||.+|++++ +.+.+.... +...++|||||++|++.....
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~--------~~~~~~~spdg~~l~~~~~~~----- 422 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG--KTKDLTPES--------GMHRTQLSPDGSAIIDIFQSP----- 422 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC--CCEESCCSS--------SEEEEEECTTSSEEEEEEECS-----
T ss_pred EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC--CceeccCCC--------ceEEEEECCCCCEEEEEecCC-----
Confidence 55 799999999998764432 2468999999884 345553211 223478999999998875321
Q ss_pred EEEEecCCCCCCCCCCceeeeecCCCc
Q 005240 380 YILLNGRGFTPEGNIPFLDLFDINTGS 406 (706)
Q Consensus 380 ~~~~~~~g~~~~~~~~~l~~~d~~~g~ 406 (706)
.....++++|+++++
T Consensus 423 ------------~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 423 ------------TVPRKVTVTNIGKGS 437 (706)
T ss_dssp ------------SCSCEEEEEESSSCE
T ss_pred ------------CCCcEEEEEECCCCe
Confidence 112347788888776
No 27
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=3e-18 Score=182.01 Aligned_cols=293 Identities=11% Similarity=0.050 Sum_probs=186.8
Q ss_pred eEEEEEcCCC-ceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhc
Q 005240 63 RVWIADAETG-EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (706)
Q Consensus 63 ~l~~~d~~~g-~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (706)
..|+ |..+| ..++|+..........+..++|||||++|+|.....
T Consensus 12 ~~~~-d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~--------------------------------- 57 (396)
T 3c5m_A 12 ETFV-DSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFD--------------------------------- 57 (396)
T ss_dssp EEEE-CTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT---------------------------------
T ss_pred heee-cCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecC---------------------------------
Confidence 4454 55554 567787543321111256789999999999985421
Q ss_pred cCCchhhhhhhhcccceEEEEccC-CCceecCCC-ceE-eeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC
Q 005240 142 LKDEYDESLFDYYTTAQLVLGSLD-GTAKDFGTP-AVY-TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (706)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~~l~-g~~~~lt~~-~~~-~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 218 (706)
...+||+++++ |+.++++.. ... ..+.|||||++|+|.+.. .+|+++++++
T Consensus 58 -------------g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-------------~~l~~~d~~~ 111 (396)
T 3c5m_A 58 -------------GNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-------------LNLMKVDLET 111 (396)
T ss_dssp -------------SSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT-------------TEEEEEETTT
T ss_pred -------------CCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC-------------CcEEEEECCC
Confidence 12579999995 477788766 332 338899999999998764 2799999998
Q ss_pred CeeEEcccCCCCCCCCcccCccCCCC---------------cceeeecCCCceEEEEEeccCCCCccccCccceeeeecC
Q 005240 219 KLVRELCDLPPAEDIPVCYNSVREGM---------------RSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPA 283 (706)
Q Consensus 219 ~~~~~l~~~~~~~~~p~~~~~~~~g~---------------~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~ 283 (706)
++.+.++..... +++ .|. ....|+||++. +++..... ......|+++|+
T Consensus 112 ~~~~~~~~~~~~-----~~~---~g~~l~~~~~~~~~~~~~~~~~~spdg~~-~~~~~~~~-------~~~~~~l~~~d~ 175 (396)
T 3c5m_A 112 LEEQVIYTVDEE-----WKG---YGTWVANSDCTKLVGIEILKRDWQPLTSW-EKFAEFYH-------TNPTCRLIKVDI 175 (396)
T ss_dssp CCEEEEEECCTT-----EEE---EEEEEECTTSSEEEEEEEEGGGCCCCCSH-HHHHHHHH-------TCCCEEEEEEET
T ss_pred CCcEEEEecccc-----cCC---CCCEEEeccCCccccccccccccCCCCcc-eeeeeecc-------CCCcceEEEEEC
Confidence 888877764321 000 000 01356777665 33221000 012336999998
Q ss_pred CCCCCCCceEEeecccccccceecC-CCceEEEEeeccc--cceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEe
Q 005240 284 EPAEGEKPEILHKLDLRFRSVSWCD-DSLALVNETWYKT--SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR 360 (706)
Q Consensus 284 ~~~~~~~~~~l~~~~~~~~~~~wsp-Dg~~l~~~~~~~~--~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 360 (706)
++++.+.+......+..+.|+| ||+.|++.+.... ...+||+++++++ +.+.+....... ....+.|
T Consensus 176 ---~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~-----~~~~~~~ 245 (396)
T 3c5m_A 176 ---ETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS--NVRKIKEHAEGE-----SCTHEFW 245 (396)
T ss_dssp ---TTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC--CCEESSCCCTTE-----EEEEEEE
T ss_pred ---CCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC--ceeEeeccCCCc-----cccceEE
Confidence 7788888887777788999999 8998988764211 1157999999873 445554311000 0123679
Q ss_pred ccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceeccc-CCC
Q 005240 361 TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINL-NQL 439 (706)
Q Consensus 361 s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~-Dg~ 439 (706)
||||++|++..... + .....|+++|+++|+.+.+...++ . .+.||| ||+
T Consensus 246 spdg~~l~~~~~~~------------~----~~~~~l~~~d~~~g~~~~l~~~~~-------------~-~~~~s~~dg~ 295 (396)
T 3c5m_A 246 IPDGSAMAYVSYFK------------G----QTDRVIYKANPETLENEEVMVMPP-------------C-SHLMSNFDGS 295 (396)
T ss_dssp CTTSSCEEEEEEET------------T----TCCEEEEEECTTTCCEEEEEECCS-------------E-EEEEECSSSS
T ss_pred CCCCCEEEEEecCC------------C----CccceEEEEECCCCCeEEeeeCCC-------------C-CCCccCCCCc
Confidence 99999988875321 0 011238889998888777654321 1 168999 999
Q ss_pred EEEEEEec------------CCCCcEEEEEECCCCceeEeecCC
Q 005240 440 KILTSKES------------KTEITQYHILSWPLKKSSQITNFP 471 (706)
Q Consensus 440 ~l~~~~~~------------~~~p~~v~~~~~~~~~~~~lt~~~ 471 (706)
.+++.... ......||++|+.+++.++|+..+
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 339 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHS 339 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECC
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCC
Confidence 77765432 112378999999999888888654
No 28
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=1.3e-17 Score=199.81 Aligned_cols=238 Identities=10% Similarity=-0.002 Sum_probs=168.6
Q ss_pred CCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc------cccccccce
Q 005240 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI------CLNAVFGSF 92 (706)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~------~~~~~~~~~ 92 (706)
+..++++.. .....+.|||||++|||.. ...||++++++++...+...... .....+..+
T Consensus 236 ~~~~~l~~~---~~~~~~~~SpDG~~la~~~-----------~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~ 301 (1045)
T 1k32_A 236 KDLRKHTSF---TDYYPRHLNTDGRRILFSK-----------GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAE 301 (1045)
T ss_dssp CSCEECCCC---CSSCEEEEEESSSCEEEEE-----------TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEE
T ss_pred CcceEecCC---CCcceeeEcCCCCEEEEEe-----------CCEEEEecCCceEeeeeccCccccccccccccccccee
Confidence 666777632 2356789999999999964 25899999866665544321100 001136789
Q ss_pred EEe-cCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC-CCcee
Q 005240 93 VWV-NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GTAKD 170 (706)
Q Consensus 93 ~wS-pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~-g~~~~ 170 (706)
.|| |||++|++.+. ..|+++++. ++.+.
T Consensus 302 ~~S~pdG~~la~~~~--------------------------------------------------~~i~~~~~~~~~~~~ 331 (1045)
T 1k32_A 302 DFSPLDGDLIAFVSR--------------------------------------------------GQAFIQDVSGTYVLK 331 (1045)
T ss_dssp EEEECGGGCEEEEET--------------------------------------------------TEEEEECTTSSBEEE
T ss_pred eecCCCCCEEEEEEc--------------------------------------------------CEEEEEcCCCCceEE
Confidence 999 99999998741 578999984 46677
Q ss_pred cCCC-c-eEeeeeeCCCCcEEEEEeeccCcccccccccccceEE-EEecCCCeeEEcccCCCCCCCCcccCccCCCCcce
Q 005240 171 FGTP-A-VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQ-VWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSI 247 (706)
Q Consensus 171 lt~~-~-~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~ 247 (706)
++.. . .+..++|| ||++|++.+.. ..++ +|++++++.+.++... .....+
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~-------------~~l~~~~d~~~~~~~~l~~~~-------------~~~~~~ 384 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTRE-------------GDFLGIYDYRTGKAEKFEENL-------------GNVFAM 384 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEETT-------------EEEEEEEETTTCCEEECCCCC-------------CSEEEE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEECC-------------CceEEEEECCCCCceEecCCc-------------cceeee
Confidence 7655 4 78899999 99999988752 3789 9999988888776221 113477
Q ss_pred eeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEe-ecccccccceecCCCceEEEEeecc------
Q 005240 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFRSVSWCDDSLALVNETWYK------ 320 (706)
Q Consensus 248 ~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~~wspDg~~l~~~~~~~------ 320 (706)
+|||||+. |++... ...|+++|+ ++++.+.+. .....+..++|||||++|++.....
T Consensus 385 ~~SpDG~~-la~~~~------------~~~v~~~d~---~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 385 GVDRNGKF-AVVAND------------RFEIMTVDL---ETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp EECTTSSE-EEEEET------------TSEEEEEET---TTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred EECCCCCE-EEEECC------------CCeEEEEEC---CCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccC
Confidence 99999998 776532 125899999 778887776 4566778999999999999876432
Q ss_pred ccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeee
Q 005240 321 TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (706)
Q Consensus 321 ~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 372 (706)
.....|+++|++++ +...++.... ....+.|+|||++|++...
T Consensus 449 ~~~~~i~l~d~~~g--~~~~l~~~~~-------~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 449 YVMQAIHVYDMEGR--KIFAATTENS-------HDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CCEEEEEEEETTTT--EEEECSCSSS-------BEEEEEECTTSCEEEEEES
T ss_pred CCCCeEEEEECCCC--cEEEeeCCCc-------ccCCceEcCCCCEEEEEec
Confidence 23467999999884 3445433221 1123779999999998764
No 29
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.81 E-value=1.4e-18 Score=182.13 Aligned_cols=203 Identities=14% Similarity=0.129 Sum_probs=146.5
Q ss_pred CCCceEEEEEEccCCeEEEEEEEe-cCCCC------------------CCCCCCceEEEEEcCCCCCCcCcCCcccCCCC
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYL-PPGYD------------------QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN 538 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~-P~~~~------------------~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~ 538 (706)
..+..+.+.+.+.+| +...+|+ |.... ....+++|+||++|||++..++. .
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~--------~ 129 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSA--------S 129 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCT--------T
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCC--------c
Confidence 457889999999888 7777887 87531 11234689999999997532111 0
Q ss_pred CcCCCCchHHHHHHHC-CeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEEechH
Q 005240 539 EFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG----VADPS-RIAVGGHSYG 612 (706)
Q Consensus 539 ~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~----~id~~-~i~i~G~S~G 612 (706)
. .....+++.|+++ ||+|+.++++...+.. ....++|+.++++|+.++. .+|++ ||+|+|+|+|
T Consensus 130 ~--~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~--------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~G 199 (365)
T 3ebl_A 130 S--TIYDSLCRRFVKLSKGVVVSVNYRRAPEHR--------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSG 199 (365)
T ss_dssp B--HHHHHHHHHHHHHHTSEEEEECCCCTTTSC--------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHH
T ss_pred h--hhHHHHHHHHHHHCCCEEEEeeCCCCCCCC--------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCcc
Confidence 0 0012345667774 9999999988543321 2345789999999999765 58999 9999999999
Q ss_pred HHHHHHHHHhCCC---ceeEEEeccCCCCCCC------------------------------------------------
Q 005240 613 AFMTAHLLAHAPH---LFCCGIARSGSYNKTL------------------------------------------------ 641 (706)
Q Consensus 613 G~~a~~~~~~~p~---~~~a~v~~~~~~d~~~------------------------------------------------ 641 (706)
|++|+.++.+.++ +++++|+.+|.++...
T Consensus 200 G~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 279 (365)
T 3ebl_A 200 GNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRL 279 (365)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCC
T ss_pred HHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhh
Confidence 9999999987655 7999999999875321
Q ss_pred -----CCcc----------chHHHHHHHHHhCCCcEEEEEeCCCCccCC---CcccHHHHHHHHHHHHHHHhccCCC
Q 005240 642 -----TPFG----------FQAERFFDALKGHGALSRLVLLPFEHHVYA---ARENVMHVIWETDRWLQKYCLSNTS 700 (706)
Q Consensus 642 -----~~~~----------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~---~~~~~~~~~~~~~~f~~~~l~~~~~ 700 (706)
.|.. -+..+++++|++.|+++++++|||++|.|. ......++++.+.+||+++++++.+
T Consensus 280 ~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~~~ 356 (365)
T 3ebl_A 280 GGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYGSH 356 (365)
T ss_dssp TTSCCCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC----
T ss_pred ccCCCCCEEEEEcCcccchhHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhcccc
Confidence 0000 022389999999999999999999999986 2345678999999999999986553
No 30
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=1.7e-17 Score=168.00 Aligned_cols=271 Identities=14% Similarity=0.142 Sum_probs=183.4
Q ss_pred CCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccc
Q 005240 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (706)
Q Consensus 59 ~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (706)
.....|+++|+.+++.+++...... +..+.|||||++|++...
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~-----v~~~~~spdg~~l~~~~~-------------------------------- 61 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPEL-----FEAPNWSPDGKYLLLNSE-------------------------------- 61 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSC-----CEEEEECTTSSEEEEEET--------------------------------
T ss_pred CcceeEEEEeCCCCceeeeccCCcc-----eEeeEECCCCCEEEEEcC--------------------------------
Confidence 4457899999999988877654433 778999999999988631
Q ss_pred hhccCCchhhhhhhhcccceEEEEcc-C-CCceecCCC---ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEE
Q 005240 139 DNLLKDEYDESLFDYYTTAQLVLGSL-D-GTAKDFGTP---AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (706)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~~l-~-g~~~~lt~~---~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~ 213 (706)
..|+++++ + ++...+... ..+..++|||||++|++....... ...|+.
T Consensus 62 ------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~---------~~~l~~ 114 (297)
T 2ojh_A 62 ------------------GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFG---------KSAIYL 114 (297)
T ss_dssp ------------------TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTS---------SCEEEE
T ss_pred ------------------CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCC---------cceEEE
Confidence 57899999 5 666666543 456789999999999988754221 358899
Q ss_pred EecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceE
Q 005240 214 WTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (706)
Q Consensus 214 ~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 293 (706)
++++++..+.+..... ...+.|+|||+. |++....++. -.||.++. .+++.+.
T Consensus 115 ~~~~~~~~~~~~~~~~--------------~~~~~~spdg~~-l~~~~~~~~~---------~~l~~~~~---~~~~~~~ 167 (297)
T 2ojh_A 115 LPSTGGTPRLMTKNLP--------------SYWHGWSPDGKS-FTYCGIRDQV---------FDIYSMDI---DSGVETR 167 (297)
T ss_dssp EETTCCCCEECCSSSS--------------EEEEEECTTSSE-EEEEEEETTE---------EEEEEEET---TTCCEEE
T ss_pred EECCCCceEEeecCCC--------------ccceEECCCCCE-EEEEECCCCc---------eEEEEEEC---CCCcceE
Confidence 9988877776654421 235689999998 7765433211 14777777 6677777
Q ss_pred EeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeec
Q 005240 294 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (706)
Q Consensus 294 l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 373 (706)
+......+..+.|+|||+.|++..... +..+||.+++.++ ....+..... . ...+.|+|||++|++....
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~~i~~~~~~~~--~~~~~~~~~~-~------~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRT-GQMQIWRVRVDGS--SVERITDSAY-G------DWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTSS--CEEECCCCSE-E------EEEEEECTTSSEEEEEEEE
T ss_pred cccCCCccccceECCCCCEEEEEecCC-CCccEEEECCCCC--CcEEEecCCc-c------cCCeEECCCCCEEEEEEcC
Confidence 777777788999999999998875333 5678999998773 3444432211 1 1236799999999887643
Q ss_pred cCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCC
Q 005240 374 ENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKT 449 (706)
Q Consensus 374 ~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~ 449 (706)
.+... .+......|+.+|+++++.+.+...... ......+.|||||+.|+++.....
T Consensus 238 ~~~~~----------~~~~~~~~l~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 238 ADVFD----------HPRDLDVRVQLMDMDGGNVETLFDLFGG---------QGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp TTCCS----------CCSSEEEEEEEEETTSCSCEEEEEEEES---------TTTSCSCCBCTTSSEEEEEEECCC
T ss_pred CCCCc----------ccccCceEEEEEecCCCCceeeeccCCC---------CcccccceECCCCCEEEEEEeccC
Confidence 10000 0000123588899988877666543210 012235789999999998876543
No 31
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=2e-17 Score=188.69 Aligned_cols=286 Identities=14% Similarity=0.096 Sum_probs=182.5
Q ss_pred CCCeeeeecCCCCCccc---------ceeeC--CCCCe-EEEEeeccccccccCCceeEEEEEcC--C-CceeecccCCC
Q 005240 18 LGPEKEVHGYPDGAKIN---------FVSWS--PDGKR-IAFSVRVDEEDNVSSCKLRVWIADAE--T-GEAKPLFESPD 82 (706)
Q Consensus 18 ~g~~~~i~~~~~~~~~~---------~~~~S--PDG~~-laf~~~~~~~~~~~~~~~~l~~~d~~--~-g~~~~lt~~~~ 82 (706)
+|+.++++..+. .+. .+.|| |||++ |||+.. ...+||+++++ + ++.++|+....
T Consensus 57 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~---------~~~~l~~~~~~~~g~~~~~~l~~~~~ 125 (662)
T 3azo_A 57 DGAEESALPAPW--NVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF---------GDQRLYAFEPDAPGGAVPRPLTPVSA 125 (662)
T ss_dssp TSCEEESSCTTC--CBCCCGGGTCCCCEEEECCSSSSCEEEEEBT---------TTCCEEEECTTSTTCCCCEECSCCCC
T ss_pred CCCcceeCCCCc--cccccccccCCccceeeeecCCCeEEEEEEC---------CCCeEEEEcCCCCCCCCCEeccCCcc
Confidence 477888874332 233 56676 99999 999763 24789999998 6 88889986321
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEE
Q 005240 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (706)
Q Consensus 83 ~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 162 (706)
......+..++|||||++|++.+....... + .....+||++
T Consensus 126 ~~~~~~~~~~~~spDg~~l~~~~~~~~~~~------~---------------------------------~~~~~~i~~~ 166 (662)
T 3azo_A 126 VGGGLRWADPVLLPERGEVWCMAEEFTGEG------P---------------------------------SDVRRFLAAV 166 (662)
T ss_dssp STTCEEEEEEEEETTTTEEEEEEEEECSSS------T---------------------------------TCEEEEEEEE
T ss_pred CCCCccccCcEECCCCCEEEEEEecccCCC------C---------------------------------CCceeEEEEE
Confidence 000112568999999999999864211000 0 0023689999
Q ss_pred cc-C------CCceecC-CC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC-CC---eeEEcccCCC
Q 005240 163 SL-D------GTAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GK---LVRELCDLPP 229 (706)
Q Consensus 163 ~l-~------g~~~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~---~~~~l~~~~~ 229 (706)
++ + ++.++|+ .. ..+..++|||||++|+|.+...+.. .....+|++++++ ++ +.++++....
T Consensus 167 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~-----~~~~~~i~~~d~~~~g~~~~~~~l~~~~~ 241 (662)
T 3azo_A 167 PLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM-----PWEGTELKTARVTEDGRFADTRTLLGGPE 241 (662)
T ss_dssp ETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCC-----TTTCEEEEEEEECTTSCEEEEEEEEEETT
T ss_pred ECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCC-----CCCCcEEEEEEECCCCcccccEEeCCCCC
Confidence 99 4 5677887 65 6778899999999999988654210 0013589999999 45 6666665321
Q ss_pred CCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeeccccccccee---
Q 005240 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSW--- 306 (706)
Q Consensus 230 ~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~w--- 306 (706)
.....+.|||||+ |+|....++ ...||++|+ ++++.++++........+.|
T Consensus 242 ------------~~~~~~~~spdg~--l~~~~~~~~---------~~~l~~~~~---~~~~~~~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 242 ------------EAIAQAEWAPDGS--LIVATDRTG---------WWNLHRVDP---ATGAATQLCRREEEFAGPLWTPG 295 (662)
T ss_dssp ------------BCEEEEEECTTSC--EEEEECTTS---------SCEEEEECT---TTCCEEESSCCSSBSSCCCCSTT
T ss_pred ------------ceEcceEECCCCe--EEEEECCCC---------CeEEEEEEC---CCCceeecccccccccCcccccc
Confidence 1134679999998 666654332 125899988 67888887765544444445
Q ss_pred ------cCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceE
Q 005240 307 ------CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 380 (706)
Q Consensus 307 ------spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 380 (706)
+||++.++ .... +..+||.+|++++ +.+.|.... .. ....|++||+.+++.....
T Consensus 296 ~~~~~~~~~~~~~~-~~~~--~~~~l~~~d~~~~--~~~~l~~~~-~~-------~~~~~s~~~~~~~~~~~~~------ 356 (662)
T 3azo_A 296 MRWFAPLANGLIAV-VHGK--GAAVLGILDPESG--ELVDAAGPW-TE-------WAATLTVSGTRAVGVAASP------ 356 (662)
T ss_dssp CCSEEECTTSCEEE-EEBS--SSCEEEEEETTTT--EEEECCSSC-CE-------EEEEEEEETTEEEEEEEET------
T ss_pred CceEeEeCCCEEEE-EEEc--CccEEEEEECCCC--cEEEecCCC-Ce-------EEEEEecCCCEEEEEEcCC------
Confidence 45666444 4333 5678999999874 344443211 11 1111277888777765321
Q ss_pred EEEecCCCCCCCCCCceeeeecCCCceeeeeccc
Q 005240 381 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (706)
Q Consensus 381 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (706)
.....||.+|+++++.++|+...
T Consensus 357 -----------~~~~~i~~~d~~~g~~~~l~~~~ 379 (662)
T 3azo_A 357 -----------RTAYEVVELDTVTGRARTIGARH 379 (662)
T ss_dssp -----------TEEEEEEEEETTTCCEEEEESCC
T ss_pred -----------CCCCEEEEEECCCCceEEeecCC
Confidence 11235888999888887776543
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.78 E-value=6.2e-16 Score=164.00 Aligned_cols=357 Identities=13% Similarity=0.057 Sum_probs=214.6
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
..|++.++.. ++..... +.+..+..++|||||++|+++.. ....|+++|+.+++..+......
T Consensus 12 ~~v~v~d~~~----~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~---------~d~~i~v~d~~~~~~~~~~~~~~-- 74 (391)
T 1l0q_A 12 DNISVIDVTS----NKVTATI--PVGSNPMGAVISPDGTKVYVANA---------HSNDVSIIDTATNNVIATVPAGS-- 74 (391)
T ss_dssp TEEEEEETTT----TEEEEEE--ECSSSEEEEEECTTSSEEEEEEG---------GGTEEEEEETTTTEEEEEEECSS--
T ss_pred CEEEEEECCC----CeEEEEe--ecCCCcceEEECCCCCEEEEECC---------CCCeEEEEECCCCeEEEEEECCC--
Confidence 4688999976 6554433 33445788999999999977652 33689999999888766543333
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
.+..++|+|||++|++... ....|+++|+
T Consensus 75 ---~v~~~~~spdg~~l~~~~~------------------------------------------------~~~~v~v~d~ 103 (391)
T 1l0q_A 75 ---SPQGVAVSPDGKQVYVTNM------------------------------------------------ASSTLSVIDT 103 (391)
T ss_dssp ---SEEEEEECTTSSEEEEEET------------------------------------------------TTTEEEEEET
T ss_pred ---CccceEECCCCCEEEEEEC------------------------------------------------CCCEEEEEEC
Confidence 2778999999999887632 1157888998
Q ss_pred -CCCcee-cCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCC
Q 005240 165 -DGTAKD-FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (706)
Q Consensus 165 -~g~~~~-lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~ 242 (706)
+++... +.....+..++|+|||++|+++.... ..|++||+.+++........ .
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~-------------~ 158 (391)
T 1l0q_A 104 TSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGD------------KTVSVINTVTKAVINTVSVG-------------R 158 (391)
T ss_dssp TTTEEEEEEECSSSEEEEEECTTSSEEEEEETTT------------TEEEEEETTTTEEEEEEECC-------------S
T ss_pred CCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCC------------CEEEEEECCCCcEEEEEecC-------------C
Confidence 454433 33335678999999999998776432 48999999876655443321 1
Q ss_pred CCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeecccc
Q 005240 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTS 322 (706)
Q Consensus 243 g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~ 322 (706)
.+..+.|+|||+. |++.... .+.|+++|+ .+++.............+.|+|||+.|++..... .
T Consensus 159 ~~~~~~~~~dg~~-l~~~~~~-----------~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~-~ 222 (391)
T 1l0q_A 159 SPKGIAVTPDGTK-VYVANFD-----------SMSISVIDT---VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDK-Y 222 (391)
T ss_dssp SEEEEEECTTSSE-EEEEETT-----------TTEEEEEET---TTTEEEEEEECSSEEEEEEECTTSSEEEEEEECS-S
T ss_pred CcceEEECCCCCE-EEEEeCC-----------CCEEEEEEC---CCCeEEEEEecCCCccceEECCCCCEEEEEecCc-C
Confidence 2347799999986 5544211 135889998 5555555555556677889999999988775321 3
Q ss_pred ceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeec
Q 005240 323 QTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI 402 (706)
Q Consensus 323 ~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~ 402 (706)
...|+++|+.++ +......... ....+.|+|||++|++.... ...+..+|+
T Consensus 223 ~~~v~~~d~~~~--~~~~~~~~~~-------~~~~~~~s~dg~~l~~s~~~--------------------d~~v~v~d~ 273 (391)
T 1l0q_A 223 FNTVSMIDTGTN--KITARIPVGP-------DPAGIAVTPDGKKVYVALSF--------------------XNTVSVIDT 273 (391)
T ss_dssp CCEEEEEETTTT--EEEEEEECCS-------SEEEEEECTTSSEEEEEETT--------------------TTEEEEEET
T ss_pred CCcEEEEECCCC--eEEEEEecCC-------CccEEEEccCCCEEEEEcCC--------------------CCEEEEEEC
Confidence 456889998874 2333222111 11236789999998776421 113666777
Q ss_pred CCCceeeeecccchhhhh--hhhhhccC---CCceecccCC--C------EEEEEEecCCCCcEEEEEECCCCceeEeec
Q 005240 403 NTGSKERIWESNREKYFE--TAVALVFG---QGEEDINLNQ--L------KILTSKESKTEITQYHILSWPLKKSSQITN 469 (706)
Q Consensus 403 ~~g~~~~l~~~~~~~~~~--~~~~~~~~---~~~~~~s~Dg--~------~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~ 469 (706)
.+++....+..... +.. ........ .....|+.+. . .+.|+ +......+|.|++.+|.......
T Consensus 274 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~--~~~~~~~~~~W~~~~g~~~~~~~ 350 (391)
T 1l0q_A 274 ATNTITATMAVGKN-PYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFT--DLSKDATEWKWDFGDGSSSKKQN 350 (391)
T ss_dssp TTTEEEEEEECSSS-EECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEE--ECCBSCSEEEEECSSSCEECSSS
T ss_pred CCCcEEEEEECCcC-CCccceeeecccccccccccccccccccccccccceEEEE--eCCCCceEEEEECCCCcccCcCC
Confidence 77765544432211 000 00000000 0012233332 1 13343 33345678999988776432111
Q ss_pred CCCCCCCCCCCceEEEEEEccCC--eEEEEEEEecC
Q 005240 470 FPHPYPTLASLQKEMIKYQRKDG--VPLTATLYLPP 503 (706)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~dg--~~i~~~l~~P~ 503 (706)
....+. ....-...+++.+.+| ..++...+.++
T Consensus 351 ~~~~~~-~~g~y~~~~~~~~~~g~~~~~~~~~v~~~ 385 (391)
T 1l0q_A 351 PTHTYS-ETGIYTVRLTVSNSNGTDSQISTVNVVLK 385 (391)
T ss_dssp CEECCS-SCEEEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred CeEEeC-CCceEEEEEEEECCCCcEEEEEEEEEEcC
Confidence 101111 1223345666777788 46677777664
No 33
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.77 E-value=7.4e-18 Score=165.80 Aligned_cols=194 Identities=18% Similarity=0.217 Sum_probs=141.3
Q ss_pred CCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEE
Q 005240 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (706)
Q Consensus 479 ~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (706)
.++.+.++++. +|..+.++++.|++. .++.|+||++||..- ........++.|+++||.|
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~----~~~~p~vv~~HG~~g---------------~~~~~~~~~~~l~~~G~~v 62 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNA----DGPLPIVIVVQEIFG---------------VHEHIRDLCRRLAQEGYLA 62 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTC----CSCEEEEEEECCTTC---------------SCHHHHHHHHHHHHTTCEE
T ss_pred cceeeeEEEec-CCcceEEEEecCCCC----CCCCCEEEEEcCcCc---------------cCHHHHHHHHHHHHCCcEE
Confidence 45778899998 899999999999862 235899999998421 1111124567788999999
Q ss_pred EEcCCCCcCCCCCCCCch----------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCcee
Q 005240 559 LAGPSIPIIGEGDKLPND----------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC 628 (706)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~----------~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~ 628 (706)
+.++.++..|........ ........|+.++++++.+++ +|+++|+++|+|+||.+++.++.++|+ ++
T Consensus 63 ~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~ 140 (241)
T 3f67_A 63 IAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LK 140 (241)
T ss_dssp EEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CC
T ss_pred EEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cc
Confidence 998876543322111111 112456899999999998887 889999999999999999999999976 77
Q ss_pred EEEeccCCCCCCC----------------CCcc------------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCc---
Q 005240 629 CGIARSGSYNKTL----------------TPFG------------FQAERFFDALKGHGALSRLVLLPFEHHVYAAR--- 677 (706)
Q Consensus 629 a~v~~~~~~d~~~----------------~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--- 677 (706)
+++++.+...... .|.. -...+++++|++.+.+++++++|+++|.+...
T Consensus 141 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 220 (241)
T 3f67_A 141 AAVAWYGKLVGEKSLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRA 220 (241)
T ss_dssp EEEEESCCCSCCCCSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTST
T ss_pred eEEEEeccccCCCccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCC
Confidence 7777766543111 1110 12348999999999999999999999998632
Q ss_pred ----ccHHHHHHHHHHHHHHH
Q 005240 678 ----ENVMHVIWETDRWLQKY 694 (706)
Q Consensus 678 ----~~~~~~~~~~~~f~~~~ 694 (706)
....+.++.+++||++|
T Consensus 221 ~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 221 SYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp TCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHhhC
Confidence 22467888899999764
No 34
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.76 E-value=2.9e-17 Score=163.61 Aligned_cols=208 Identities=12% Similarity=0.064 Sum_probs=125.4
Q ss_pred CCceeEeecCCCCCCCCCCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCc
Q 005240 461 LKKSSQITNFPHPYPTLASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEF 540 (706)
Q Consensus 461 ~~~~~~lt~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~ 540 (706)
.|..+..++.+........++.+.+++. .||.+|+|+|++|++ ..|.|+||++||++.. ..
T Consensus 10 ~~~~r~~~~~~~~~~~~~~~~e~~~~~~-~dG~~i~g~l~~P~~-----~~~~p~Vl~~HG~g~~-------------~~ 70 (259)
T 4ao6_A 10 HGSMRHQMSWNGKDERKLSVQERGFSLE-VDGRTVPGVYWSPAE-----GSSDRLVLLGHGGTTH-------------KK 70 (259)
T ss_dssp -------CEECSCCEEETTEEEEEEEEE-ETTEEEEEEEEEESS-----SCCSEEEEEEC--------------------
T ss_pred cCcceeeeccCCCccccCCceEEEEEEe-eCCeEEEEEEEeCCC-----CCCCCEEEEeCCCccc-------------cc
Confidence 4555555544432222222344445554 599999999999976 2357999999998521 11
Q ss_pred CCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCC-----c----h---------hhHHHHHHHHHHHHHHHHHcCCCCCC
Q 005240 541 SGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP-----N----D---------RFVEQLVSSAEAAVEEVVRRGVADPS 602 (706)
Q Consensus 541 ~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~-----~----~---------~~~~~~~~D~~~~~~~l~~~~~id~~ 602 (706)
.......++.|+++||+|+.++.+|....+.... . . ......+.|..++++++... +|+.
T Consensus 71 ~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~ 148 (259)
T 4ao6_A 71 VEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPR 148 (259)
T ss_dssp -CHHHHHHHHHHHTTEEEEEECCCC-------------CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCC
T ss_pred chHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCc
Confidence 1112245788999999999988765421111100 0 0 11223467888889988664 6889
Q ss_pred cEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCC------------CCCcc------------chHHHHHHHHHhC
Q 005240 603 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT------------LTPFG------------FQAERFFDALKGH 658 (706)
Q Consensus 603 ~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~------------~~~~~------------~~~~~~~~~l~~~ 658 (706)
||+++|+|+||++++.++.+.| +++|++...+..... ..|.. -+..+++++|..
T Consensus 149 rv~~~G~S~GG~~a~~~a~~~p-ri~Aav~~~~~~~~~~~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~- 226 (259)
T 4ao6_A 149 PTGWWGLSMGTMMGLPVTASDK-RIKVALLGLMGVEGVNGEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGT- 226 (259)
T ss_dssp CEEEEECTHHHHHHHHHHHHCT-TEEEEEEESCCTTSTTHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCC-
T ss_pred eEEEEeechhHHHHHHHHhcCC-ceEEEEEeccccccccccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCC-
Confidence 9999999999999999999996 566666554433211 12221 123477777743
Q ss_pred CCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 659 GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 659 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
.+..+++|||..|.+ ...+.++.+++||++||+
T Consensus 227 -~~k~l~~~~G~H~~~----p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 227 -KQKTLHVNPGKHSAV----PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp -SSEEEEEESSCTTCC----CHHHHTHHHHHHHHHHCC
T ss_pred -CCeEEEEeCCCCCCc----CHHHHHHHHHHHHHHhcC
Confidence 456889999844433 245788999999999985
No 35
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.76 E-value=1.8e-17 Score=171.40 Aligned_cols=191 Identities=12% Similarity=0.108 Sum_probs=145.0
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEE
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAV 558 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v 558 (706)
+..+.+++++.|| .|++++|.|.+. +.|+||++|||++.. ++... ....+..|++ .||+|
T Consensus 61 ~~~~~~~~~~~~g-~i~~~~~~p~~~------~~p~vv~~HGgg~~~--------g~~~~----~~~~~~~la~~~g~~V 121 (326)
T 3ga7_A 61 MTTRTCAVPTPYG-DVTTRLYSPQPT------SQATLYYLHGGGFIL--------GNLDT----HDRIMRLLARYTGCTV 121 (326)
T ss_dssp CEEEEEEECCTTS-CEEEEEEESSSS------CSCEEEEECCSTTTS--------CCTTT----THHHHHHHHHHHCSEE
T ss_pred cceEEEEeecCCC-CeEEEEEeCCCC------CCcEEEEECCCCccc--------CChhh----hHHHHHHHHHHcCCEE
Confidence 4558999999898 899999999751 138999999997532 11111 1234566777 89999
Q ss_pred EEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEechHHHHHHHHHHhCCCc------eeE
Q 005240 559 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL------FCC 629 (706)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~---~id~~~i~i~G~S~GG~~a~~~~~~~p~~------~~a 629 (706)
+..++++..++. ....+.|+.++++|+.++. .+|++||+|+|+|+||++|+.++.+.++. +++
T Consensus 122 ~~~dyr~~p~~~--------~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~ 193 (326)
T 3ga7_A 122 IGIDYSLSPQAR--------YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIA 193 (326)
T ss_dssp EEECCCCTTTSC--------TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEE
T ss_pred EEeeCCCCCCCC--------CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceE
Confidence 998887543321 1234689999999999863 37999999999999999999999887664 999
Q ss_pred EEeccCCCCCCCC-------------------------------------------------Ccc----------chHHH
Q 005240 630 GIARSGSYNKTLT-------------------------------------------------PFG----------FQAER 650 (706)
Q Consensus 630 ~v~~~~~~d~~~~-------------------------------------------------~~~----------~~~~~ 650 (706)
+++.+|+++.... |.. -+..+
T Consensus 194 ~vl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~ 273 (326)
T 3ga7_A 194 ILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLIDDSRL 273 (326)
T ss_dssp EEEESCCCSCSCCHHHHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTHHHHHH
T ss_pred EEEeccccccCCChhHhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCHHHHHH
Confidence 9999987653210 000 02338
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCCcc----cHHHHHHHHHHHHHHHhcc
Q 005240 651 FFDALKGHGALSRLVLLPFEHHVYAARE----NVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~----~~~~~~~~~~~f~~~~l~~ 697 (706)
++++|++.|+++++++|||++|.|.... ...+..+.+.+||+++|..
T Consensus 274 ~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 274 LHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999985322 3478999999999999864
No 36
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.76 E-value=1.8e-17 Score=175.13 Aligned_cols=209 Identities=16% Similarity=0.182 Sum_probs=151.4
Q ss_pred ceEEEEEEcc-CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 481 ~~~~~~~~~~-dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
..+.+.+.+. ||..+++++|.|+++++.+ ++|+||++||++............ ................|+.|+
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~--~~Pvvv~lHG~g~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~vv 217 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPDR--KYPLVVFLHGAGERGTDNYLQVAG---NRGAVVWAQPRYQVVHPCFVL 217 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTTS--CEEEEEEECCGGGCSSSSSHHHHS---STTTTGGGSHHHHTTSCCEEE
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCCC--CccEEEEECCCCCCCCchhhhhhc---cccceeecCccccccCCEEEE
Confidence 5678899998 9999999999999876544 599999999986321100000000 000001111233446889999
Q ss_pred EcCCCCcCCCCCCCCc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 560 AGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 560 ~~~~~~~~g~g~~~~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
.++.++..+++..+.. .......+.|+.++++++.++..+|++||+|+|+|+||++++.++.++|++|+++++.+|.
T Consensus 218 ~pd~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~ 297 (380)
T 3doh_A 218 APQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGG 297 (380)
T ss_dssp EECCCTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred EecCCCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCC
Confidence 9888877777665442 1112345788889999999887799999999999999999999999999999999999998
Q ss_pred CCCCC------CCcc------------chHHHHHHHHHhCCCcEEEEEeCCC---CccCCCcccHHHHHH--HHHHHHHH
Q 005240 637 YNKTL------TPFG------------FQAERFFDALKGHGALSRLVLLPFE---HHVYAARENVMHVIW--ETDRWLQK 693 (706)
Q Consensus 637 ~d~~~------~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~---~H~~~~~~~~~~~~~--~~~~f~~~ 693 (706)
.+... .|.. -+..+++++|++.++++++++||++ +|.|.....+...+. .+++||.+
T Consensus 298 ~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~~~~~~~~i~~wL~~ 377 (380)
T 3doh_A 298 GDVSKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWIPTYENQEAIEWLFE 377 (380)
T ss_dssp CCGGGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHHHHHTCHHHHHHHHT
T ss_pred CChhhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHHHhcCCHHHHHHHHh
Confidence 65321 2211 1345899999999999999999999 565554445666677 89999987
Q ss_pred H
Q 005240 694 Y 694 (706)
Q Consensus 694 ~ 694 (706)
+
T Consensus 378 ~ 378 (380)
T 3doh_A 378 Q 378 (380)
T ss_dssp C
T ss_pred h
Confidence 5
No 37
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.76 E-value=6.9e-18 Score=174.02 Aligned_cols=180 Identities=18% Similarity=0.105 Sum_probs=134.2
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCCCcCCCCCC
Q 005240 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDK 572 (706)
Q Consensus 494 ~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~ 572 (706)
.+++++|.|++ .++.|+||++|||++.. ++...+ ..++..|++ .||+|+.+++++..+.
T Consensus 66 ~i~~~~~~p~~-----~~~~p~vv~~HGGg~~~--------g~~~~~----~~~~~~la~~~g~~vv~~dyr~~p~~--- 125 (322)
T 3fak_A 66 GCAAEWVRAPG-----CQAGKAILYLHGGGYVM--------GSINTH----RSMVGEISRASQAAALLLDYRLAPEH--- 125 (322)
T ss_dssp TEEEEEEECTT-----CCTTCEEEEECCSTTTS--------CCHHHH----HHHHHHHHHHHTSEEEEECCCCTTTS---
T ss_pred CeEEEEEeCCC-----CCCccEEEEEcCCcccc--------CChHHH----HHHHHHHHHhcCCEEEEEeCCCCCCC---
Confidence 48999999975 12479999999986532 111111 133455665 6999999888754322
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCc----eeEEEeccCCCCCCCC------
Q 005240 573 LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLT------ 642 (706)
Q Consensus 573 ~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~----~~a~v~~~~~~d~~~~------ 642 (706)
. ....++|+.++++|+.++ .+|++||+|+|+|+||++|+.++.+.+++ ++++++.+|.++....
T Consensus 126 -~----~~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 199 (322)
T 3fak_A 126 -P----FPAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKT 199 (322)
T ss_dssp -C----TTHHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHH
T ss_pred -C----CCcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHH
Confidence 1 234578999999999988 67999999999999999999999887654 9999999998764310
Q ss_pred ------------------------------------------Ccc----------chHHHHHHHHHhCCCcEEEEEeCCC
Q 005240 643 ------------------------------------------PFG----------FQAERFFDALKGHGALSRLVLLPFE 670 (706)
Q Consensus 643 ------------------------------------------~~~----------~~~~~~~~~l~~~~~~~~~~~~~~~ 670 (706)
|.. -+..+++++|++.|+++++++|||+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~ 279 (322)
T 3fak_A 200 RAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLLDDSIKLDAKAKADGVKSTLEIWDDM 279 (322)
T ss_dssp TTTTCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred hCccCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCccHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 000 0223899999999999999999999
Q ss_pred CccCCC----cccHHHHHHHHHHHHHHHhccCC
Q 005240 671 HHVYAA----RENVMHVIWETDRWLQKYCLSNT 699 (706)
Q Consensus 671 ~H~~~~----~~~~~~~~~~~~~f~~~~l~~~~ 699 (706)
+|.|.. .....+.++.+.+||+++|....
T Consensus 280 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3fak_A 280 IHVWHAFHPMLPEGKQAIVRVGEFMREQWAALA 312 (322)
T ss_dssp CTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC--
T ss_pred eeehhhccCCCHHHHHHHHHHHHHHHHHHhcch
Confidence 998863 22357889999999999987543
No 38
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.74 E-value=7.6e-16 Score=176.87 Aligned_cols=298 Identities=10% Similarity=0.044 Sum_probs=182.1
Q ss_pred cceeEeecCCCCCCCCeeeeec---CCCCC--cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeeccc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHG---YPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~---~~~~~--~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~ 79 (706)
..|++.++.. |+.+.+.. +..+. .+..++|||||++|||+.+.. ++...+||++|+++|+..+++.
T Consensus 98 ~~l~~~~~~~----~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~-----G~~~~~i~v~d~~tg~~~~~~~ 168 (710)
T 2xdw_A 98 RVLYVQDSLE----GEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS-----GSDWVTIKFMKVDGAKELPDVL 168 (710)
T ss_dssp CEEEEESSTT----SCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET-----TCSCEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEcCCC----CCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC-----CCceEEEEEEECCCCCCCcccc
Confidence 3567776644 66666532 22222 467899999999999998631 1333599999999999887643
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceE
Q 005240 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (706)
Q Consensus 80 ~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 159 (706)
.... +..+.|||||+.|+|.+........ .+.. . . .....+|
T Consensus 169 ~~~~-----~~~~~wspDg~~l~~~~~~~~~~~~------~~~~---~--~----------------------~~~~~~v 210 (710)
T 2xdw_A 169 ERVK-----FSCMAWTHDGKGMFYNAYPQQDGKS------DGTE---T--S----------------------TNLHQKL 210 (710)
T ss_dssp EEEC-----SCCEEECTTSSEEEEEECCCCSSCC------SSSC---C--C----------------------CCCCCEE
T ss_pred cCcc-----cceEEEEeCCCEEEEEEECCccccc------cccc---c--c----------------------cCCCCEE
Confidence 2211 5678999999999998754221100 0000 0 0 0012679
Q ss_pred EEEcc-CCCc--eecCCC----ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC------C--eeEEc
Q 005240 160 VLGSL-DGTA--KDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG------K--LVREL 224 (706)
Q Consensus 160 ~~~~l-~g~~--~~lt~~----~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~--~~~~l 224 (706)
|++++ +++. +.+... .....+.|||||++|++.+..... ...+|+++++++ + ..+.|
T Consensus 211 ~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~--------~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 211 YYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD--------PVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS--------SCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred EEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC--------CccEEEEEECcccccccCCccceEEe
Confidence 99999 4432 333222 235689999999999998764321 035899999986 4 46666
Q ss_pred ccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC---ceEEeeccc--
Q 005240 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHKLDL-- 299 (706)
Q Consensus 225 ~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---~~~l~~~~~-- 299 (706)
+..... . ...|+|||+. |++..+.+. .+..|+++|+ +++. .+.|+....
T Consensus 283 ~~~~~~-------------~-~~~~s~dg~~-l~~~s~~~~--------~~~~l~~~d~---~~~~~~~~~~l~~~~~~~ 336 (710)
T 2xdw_A 283 IDNFEG-------------E-YDYVTNEGTV-FTFKTNRHS--------PNYRLINIDF---TDPEESKWKVLVPEHEKD 336 (710)
T ss_dssp ECSSSS-------------C-EEEEEEETTE-EEEEECTTC--------TTCEEEEEET---TSCCGGGCEEEECCCSSC
T ss_pred eCCCCc-------------E-EEEEeccCCE-EEEEECCCC--------CCCEEEEEeC---CCCCcccceeccCCCCCC
Confidence 543211 1 2369999998 887754321 1235899998 5554 366665433
Q ss_pred ccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcce
Q 005240 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQI 379 (706)
Q Consensus 300 ~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 379 (706)
.+..+.|++++. |++.... ++..+||++++.+++ ....+.. ....+ ..+.++||++.+++.....
T Consensus 337 ~~~~~~~~~~~~-lv~~~~~-~g~~~l~~~~~~~g~-~~~~l~~-~~~~v------~~~~~s~d~~~l~~~~ss~----- 401 (710)
T 2xdw_A 337 VLEWVACVRSNF-LVLCYLH-DVKNTLQLHDLATGA-LLKIFPL-EVGSV------VGYSGQKKDTEIFYQFTSF----- 401 (710)
T ss_dssp EEEEEEEETTTE-EEEEEEE-TTEEEEEEEETTTCC-EEEEECC-CSSEE------EEEECCTTCSEEEEEEECS-----
T ss_pred eEEEEEEEcCCE-EEEEEEE-CCEEEEEEEECCCCC-EEEecCC-CCceE------EEEecCCCCCEEEEEEeCC-----
Confidence 567789996555 4444333 356789999986532 2233321 11111 1256788998887765321
Q ss_pred EEEEecCCCCCCCCCCceeeeecCCCc--eeee
Q 005240 380 YILLNGRGFTPEGNIPFLDLFDINTGS--KERI 410 (706)
Q Consensus 380 ~~~~~~~g~~~~~~~~~l~~~d~~~g~--~~~l 410 (706)
..-..++++|+++|+ .+.+
T Consensus 402 ------------~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 402 ------------LSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp ------------SCCCEEEEEETTSSSCCCEEE
T ss_pred ------------CCCCEEEEEECCCCccceEEe
Confidence 112358888988887 4444
No 39
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.74 E-value=3.8e-17 Score=164.56 Aligned_cols=198 Identities=15% Similarity=0.138 Sum_probs=141.0
Q ss_pred EEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCC
Q 005240 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (706)
Q Consensus 486 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 565 (706)
++...+|..+..++..|....+ .++.|+||++|||++.. +. .......+..|+++||.|+.+++++
T Consensus 18 ~~~~~~g~~l~~~~~~~~~~~~--~~~~p~vv~~HGgg~~~--------~~----~~~~~~~~~~l~~~G~~v~~~d~~g 83 (276)
T 3hxk_A 18 TFSLNDTAWVDFYQLQNPRQNE--NYTFPAIIICPGGGYQH--------IS----QRESDPLALAFLAQGYQVLLLNYTV 83 (276)
T ss_dssp ECCCBTTBEEEEECCCC--------CCBCEEEEECCSTTTS--------CC----GGGSHHHHHHHHHTTCEEEEEECCC
T ss_pred cccCCCCeEEEEEEeCCccccc--CCCCCEEEEEcCCcccc--------CC----chhhHHHHHHHHHCCCEEEEecCcc
Confidence 4556688888877766653222 13589999999986431 11 1112345678889999999977764
Q ss_pred cCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEechHHHHHHHHHHh-CCCceeEEEeccCCCCCCC
Q 005240 566 IIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNKTL 641 (706)
Q Consensus 566 ~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~---~id~~~i~i~G~S~GG~~a~~~~~~-~p~~~~a~v~~~~~~d~~~ 641 (706)
. |.+... ......+.|+.++++|+.+.. .+|+++|+|+|+|+||++++.++.+ .+.+++++++.+|..+...
T Consensus 84 ~---g~s~~~-~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~ 159 (276)
T 3hxk_A 84 M---NKGTNY-NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTF 159 (276)
T ss_dssp T---TSCCCS-CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTS
T ss_pred C---CCcCCC-CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHh
Confidence 4 332211 123466889999999998863 2799999999999999999999998 7789999999998875110
Q ss_pred -----------------------------CCcc------------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc--
Q 005240 642 -----------------------------TPFG------------FQAERFFDALKGHGALSRLVLLPFEHHVYAARE-- 678 (706)
Q Consensus 642 -----------------------------~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-- 678 (706)
.|.. -...+++++|+..+.++++++||+++|.+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 239 (276)
T 3hxk_A 160 GWPSDLSHFNFEIENISEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRT 239 (276)
T ss_dssp SCSSSSSSSCCCCSCCGGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTT
T ss_pred hCCcchhhhhcCchhhhhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCcc
Confidence 1110 123589999999999999999999999886422
Q ss_pred ----------cHHHHHHHHHHHHHHHhccCCCC
Q 005240 679 ----------NVMHVIWETDRWLQKYCLSNTSD 701 (706)
Q Consensus 679 ----------~~~~~~~~~~~f~~~~l~~~~~~ 701 (706)
...++.+.+.+||+++.+.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~ 272 (276)
T 3hxk_A 240 TAPSDAYCLPSVHRWVSWASDWLERQIKNLEHH 272 (276)
T ss_dssp SCSSSTTCCHHHHTHHHHHHHHHHHHHHTTC--
T ss_pred ccccccccCchHHHHHHHHHHHHHhCccccccc
Confidence 34688899999999998765543
No 40
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.74 E-value=2.1e-15 Score=157.21 Aligned_cols=279 Identities=9% Similarity=0.015 Sum_probs=176.3
Q ss_pred CCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCC
Q 005240 29 DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (706)
Q Consensus 29 ~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~ 108 (706)
.+.....++|||||++|+.+..... .......|+++|+++++..+....... +..+.|+|||++|++...
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~---~~~~~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~-- 108 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSR---KLDKGGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQTLWFGNT-- 108 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCT---TTEESEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTTEEEEEET--
T ss_pred hccCccceEECCCCCEEEEEcCCCc---CCCCCccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCCEEEEEec--
Confidence 3345778899999999966553100 001257899999998876655433322 568899999998777642
Q ss_pred CCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc-eecCCC--c--------e
Q 005240 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP--A--------V 176 (706)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~-~~lt~~--~--------~ 176 (706)
....|+++|+ +++. ..+... . .
T Consensus 109 ----------------------------------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (353)
T 3vgz_A 109 ----------------------------------------------VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQ 142 (353)
T ss_dssp ----------------------------------------------TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCE
T ss_pred ----------------------------------------------CCCEEEEEeCCCCeeEEEEecCCCccccccCCCC
Confidence 1157888888 5543 333322 1 2
Q ss_pred EeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCce
Q 005240 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (706)
Q Consensus 177 ~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~ 256 (706)
...++|||||++|++..... ...|++||+.+++........+ ..+..+.|+|||+.
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~-----------~~~i~~~d~~~~~~~~~~~~~~------------~~~~~~~~s~dg~~- 198 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGK-----------ESVIWVVDGGNIKLKTAIQNTG------------KMSTGLALDSEGKR- 198 (353)
T ss_dssp EEEEEEETTTTEEEEEEESS-----------SCEEEEEETTTTEEEEEECCCC------------TTCCCCEEETTTTE-
T ss_pred CceEEECCCCCEEEEEecCC-----------CceEEEEcCCCCceEEEecCCC------------CccceEEECCCCCE-
Confidence 57799999999998776432 2479999998776554433111 11346799999997
Q ss_pred EEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec-----ccccccceecCCCceEEEEeeccccceEEEEEcC
Q 005240 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-----DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (706)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-----~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (706)
|++.. . .+.|+++|. .+++....... ......+.|+|||+.|++... ....|+++|+
T Consensus 199 l~~~~-~-----------~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~~v~~~d~ 260 (353)
T 3vgz_A 199 LYTTN-A-----------DGELITIDT---ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS---KAAEVLVVDT 260 (353)
T ss_dssp EEEEC-T-----------TSEEEEEET---TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES---SSSEEEEEET
T ss_pred EEEEc-C-----------CCeEEEEEC---CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC---CCCEEEEEEC
Confidence 66442 1 124778888 55554433222 223445799999998876542 2356999999
Q ss_pred CCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeee
Q 005240 332 GSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIW 411 (706)
Q Consensus 332 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (706)
.+++ ....... +....+.++|||+++++.... ...|..+|+.+++....+
T Consensus 261 ~~~~--~~~~~~~--------~~~~~~~~s~dg~~l~v~~~~--------------------~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 261 RNGN--ILAKVAA--------PESLAVLFNPARNEAYVTHRQ--------------------AGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp TTCC--EEEEEEC--------SSCCCEEEETTTTEEEEEETT--------------------TTEEEEEETTTTEEEEEE
T ss_pred CCCc--EEEEEEc--------CCCceEEECCCCCEEEEEECC--------------------CCeEEEEECCCCeEEEEE
Confidence 8743 3322221 111347789999988776521 124777888888765554
Q ss_pred cccchhhhhhhhhhccCCCceecccCCCEEEEEEec
Q 005240 412 ESNREKYFETAVALVFGQGEEDINLNQLKILTSKES 447 (706)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~ 447 (706)
..... ...+.|+|||+.|+++...
T Consensus 311 ~~~~~------------~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 311 DTPTH------------PNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ECCSE------------EEEEEECTTSCEEEEEEEC
T ss_pred ecCCC------------CCeEEEcCCCCEEEEEEcc
Confidence 43221 1246899999988777665
No 41
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.74 E-value=7e-17 Score=156.57 Aligned_cols=194 Identities=16% Similarity=0.135 Sum_probs=147.1
Q ss_pred CCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEE
Q 005240 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (706)
Q Consensus 479 ~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (706)
.+..+.+.++. +|..+.++++.|++ +.|+||++||.+.. . ..+ .....++.|+++||.|
T Consensus 9 ~~~~~~~~~~~-~g~~l~~~~~~p~~-------~~p~vv~~hG~~~~--------~---~~~--~~~~~~~~l~~~G~~v 67 (223)
T 2o2g_A 9 QPQEYAVSVSV-GEVKLKGNLVIPNG-------ATGIVLFAHGSGSS--------R---YSP--RNRYVAEVLQQAGLAT 67 (223)
T ss_dssp CCCEEEEEEEE-TTEEEEEEEECCTT-------CCEEEEEECCTTCC--------T---TCH--HHHHHHHHHHHHTCEE
T ss_pred CceeeEEEEec-CCeEEEEEEecCCC-------CceEEEEecCCCCC--------C---Ccc--chHHHHHHHHHCCCEE
Confidence 35678888887 89999999999964 26999999996421 0 000 0113567788899999
Q ss_pred EEcCCCCcCCCCCCCCch------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEe
Q 005240 559 LAGPSIPIIGEGDKLPND------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIA 632 (706)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~------~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~ 632 (706)
+.++.++ +|.+.... ...+....|+.++++++..+..+|+++++++|+|+||.+++.++.++|++++++++
T Consensus 68 ~~~d~~g---~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~ 144 (223)
T 2o2g_A 68 LLIDLLT---QEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVS 144 (223)
T ss_dssp EEECSSC---HHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEE
T ss_pred EEEcCCC---cCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEE
Confidence 9977653 33221110 23456688999999999998888999999999999999999999999999999999
Q ss_pred ccCCCCCCC-------CCcc--------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 633 RSGSYNKTL-------TPFG--------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 633 ~~~~~d~~~-------~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
.+|..+... .|.. .-..+..+.+.+.+.+++++++|+++|.+..+....++.+.+.+||+++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 145 RGGRPDLAPSALPHVKAPTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp ESCCGGGCTTTGGGCCSCEEEEEETTCHHHHHHHHHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred eCCCCCcCHHHHhcCCCCEEEEEccccCCCCHHHHHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHhcC
Confidence 998765331 1211 112356677778788899999999999987656678899999999999874
No 42
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.74 E-value=2.9e-16 Score=163.70 Aligned_cols=244 Identities=16% Similarity=0.200 Sum_probs=150.7
Q ss_pred ccceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
...|++.+++. |+.+++ ..+..|+|||||++|||++... ..+..+||++++++++.++++..+.
T Consensus 42 ~~~l~~~d~~~----~~~~~l------~~~~~~~~SpDg~~la~~~~~~-----~~~~~~l~~~~~~~g~~~~l~~~~~- 105 (347)
T 2gop_A 42 ENTIVIENLKN----NARRFI------ENATMPRISPDGKKIAFMRANE-----EKKVSEIWVADLETLSSKKILEAKN- 105 (347)
T ss_dssp EEEEEEEETTT----CCEEEE------ESCEEEEECTTSSEEEEEEEET-----TTTEEEEEEEETTTTEEEEEEEESE-
T ss_pred cceEEEEeCCC----CceEEc------ccCCCeEECCCCCEEEEEEecc-----CCCcceEEEEECCCCceEEEEcCCC-
Confidence 46789999976 887777 2477899999999999987531 1256789999999999998875432
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
+..+.|||||+.|+|.+....... .... ...+.+..++..+......+||+++
T Consensus 106 -----~~~~~wspdg~~l~~~~~~~~~~~----------------~~~~------~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 106 -----IRSLEWNEDSRKLLIVGFKRREDE----------------DFIF------EDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp -----EEEEEECTTSSEEEEEEECCCC-------------------------------CCCC---------CEEEEEEEE
T ss_pred -----ccceeECCCCCEEEEEEccCCCcC----------------CcEE------EcccceeecCcccccCccceEEEEE
Confidence 578899999999999864311000 0000 0111222232222222347899999
Q ss_pred c-CCCc-eecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccc-cceEEEEecCCCeeEEcccCCCCCCCCcccCcc
Q 005240 164 L-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARF-SQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (706)
Q Consensus 164 l-~g~~-~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~ 240 (706)
+ +|+. +.++.. .+..+.||||| |+|+........ ... ..+|++++ +++.+.|+.. ..
T Consensus 159 ~~~~~~~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~~----~~~~~~~l~~~d--~~~~~~l~~~-~~---------- 218 (347)
T 2gop_A 159 TESEEVIEEFEKP-RFSSGIWHRDK--IVVNVPHREIIP----QYFKFWDIYIWE--DGKEEKMFEK-VS---------- 218 (347)
T ss_dssp TTTTEEEEEEEEE-TTCEEEEETTE--EEEEEECCCSSC----CSSCCEEEEEEE--TTEEEEEEEE-ES----------
T ss_pred CCCCeEEeeecCC-CcccccCCCCe--EEEEEecccccc----cccccccEEEeC--CCceEEeccC-cc----------
Confidence 9 4566 667653 56788999999 777664432100 001 24788888 6667777653 11
Q ss_pred CCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec-cccccc-ceecCCCceEEEEee
Q 005240 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRS-VSWCDDSLALVNETW 318 (706)
Q Consensus 241 ~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~-~~wspDg~~l~~~~~ 318 (706)
...+||||+. |++........ ......|+++| +++.+.++.. ...+.. +.|+ || +++...
T Consensus 219 -----~~~~spdg~~-l~~~~~~~~~~----~~~~~~l~~~d-----~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~ 280 (347)
T 2gop_A 219 -----FYAVDSDGER-ILLYGKPEKKY----MSEHNKLYIYD-----GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLF 280 (347)
T ss_dssp -----EEEEEECSSC-EEEEECCSSSC----CCSSCEEEEEC-----SSCEEESSTTCCSEEEEEEEET-TE--EEEEEE
T ss_pred -----eeeECCCCCE-EEEEEccccCC----ccccceEEEEC-----CCceEeccccCCcccCCccEEc-Cc--EEEEEe
Confidence 1245999998 88775432110 01223588876 3556666543 455665 8999 88 555543
Q ss_pred ccccceEEEEEc
Q 005240 319 YKTSQTRTWLVC 330 (706)
Q Consensus 319 ~~~~~~~l~~~d 330 (706)
.. +..+|| ++
T Consensus 281 ~~-~~~~l~-~~ 290 (347)
T 2gop_A 281 EE-GSVNLY-IW 290 (347)
T ss_dssp ET-TEEEEE-EE
T ss_pred cC-CcEEEE-Ec
Confidence 33 567899 88
No 43
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.74 E-value=2.2e-16 Score=158.28 Aligned_cols=201 Identities=16% Similarity=0.133 Sum_probs=140.2
Q ss_pred CCceEEEEEEcc-CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHC---
Q 005240 479 SLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR--- 554 (706)
Q Consensus 479 ~~~~~~~~~~~~-dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 554 (706)
..+.+.+++.+. +|.++..++|+|+++++.+ ++|+||++||++.. ...|..........+..|++.
T Consensus 29 ~g~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~--~~P~vv~lHG~g~~--------~~~~~~~~~~~~~~~~~l~~~g~~ 98 (268)
T 1jjf_A 29 RGQVVNISYFSTATNSTRPARVYLPPGYSKDK--KYSVLYLLHGIGGS--------ENDWFEGGGRANVIADNLIAEGKI 98 (268)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEECTTCCTTS--CBCEEEEECCTTCC--------TTTTTTTTTCHHHHHHHHHHTTSS
T ss_pred CceEEEEEEeccccCCceEEEEEeCCCCCCCC--CccEEEEECCCCCC--------cchhhhccccHHHHHHHHHHcCCC
Confidence 346778888764 6789999999999876533 58999999998531 112221111111235667776
Q ss_pred -CeEEEEcCCCCcCCCCCCCCchhhHHHHHHH-HHHHHHHHHHcCCC--CCCcEEEEEechHHHHHHHHHHhCCCceeEE
Q 005240 555 -RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSS-AEAAVEEVVRRGVA--DPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 630 (706)
Q Consensus 555 -G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D-~~~~~~~l~~~~~i--d~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~ 630 (706)
||+|+.+++++. +.+ . ...+ .....+ +..+++++.++..+ |++||+|+|+|+||++|+.++.++|++|+++
T Consensus 99 ~~~~vv~~d~~~~-~~~--~-~~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~ 173 (268)
T 1jjf_A 99 KPLIIVTPNTNAA-GPG--I-ADGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYI 173 (268)
T ss_dssp CCCEEEEECCCCC-CTT--C-SCHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEE
T ss_pred CCEEEEEeCCCCC-Ccc--c-cccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhhe
Confidence 599999777643 211 1 1122 222333 44567777665444 8999999999999999999999999999999
Q ss_pred EeccCCCCCCC---------------CC-ccc----------hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHH
Q 005240 631 IARSGSYNKTL---------------TP-FGF----------QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 684 (706)
Q Consensus 631 v~~~~~~d~~~---------------~~-~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 684 (706)
++.+|..++.. .| ... ..++++++|++.++++++++|||++|.+. .+...+
T Consensus 174 v~~s~~~~~~~~~~~~~~~~~~~~~~~pp~li~~G~~D~~v~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~ 250 (268)
T 1jjf_A 174 GPISAAPNTYPNERLFPDGGKAAREKLKLLFIACGTNDSLIGFGQRVHEYCVANNINHVYWLIQGGGHDFN---VWKPGL 250 (268)
T ss_dssp EEESCCTTSCCHHHHCTTTTHHHHHHCSEEEEEEETTCTTHHHHHHHHHHHHHTTCCCEEEEETTCCSSHH---HHHHHH
T ss_pred EEeCCCCCCCchhhhcCcchhhhhhcCceEEEEecCCCCCccHHHHHHHHHHHCCCceEEEEcCCCCcCHh---HHHHHH
Confidence 99999765421 11 110 23479999999999999999999999874 244667
Q ss_pred HHHHHHHHHHhcc
Q 005240 685 WETDRWLQKYCLS 697 (706)
Q Consensus 685 ~~~~~f~~~~l~~ 697 (706)
..+++||.++...
T Consensus 251 ~~~~~~l~~~~~~ 263 (268)
T 1jjf_A 251 WNFLQMADEAGLT 263 (268)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHhcCcc
Confidence 8899999987443
No 44
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.73 E-value=7.5e-17 Score=180.91 Aligned_cols=219 Identities=11% Similarity=0.030 Sum_probs=149.3
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEc--CCCceeecccCCCc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA--ETGEAKPLFESPDI 83 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~--~~g~~~~lt~~~~~ 83 (706)
++.|++++. |+.++++.... ..+..|.|||| +|+|++..+ .++....||.+++ +++.. +++....
T Consensus 45 ~~~lw~~~~----g~~~~lt~~~~-~~~~~~~~spd--~~l~~~~~~----~g~~~~~l~~~~~~~~g~~~-~l~~~~~- 111 (582)
T 3o4h_A 45 SVNAYLYDG----GETVKLNREPI-NSVLDPHYGVG--RVILVRDVS----KGAEQHALFKVNTSRPGEEQ-RLEAVKP- 111 (582)
T ss_dssp EEEEEEEET----TEEEECCSSCC-SEECEECTTCS--EEEEEEECS----TTSCCEEEEEEETTSTTCCE-ECTTSCS-
T ss_pred ceeEEEEcC----CCcEeeecccc-cccccccCCCC--eEEEEeccC----CCCcceEEEEEeccCCCccc-cccCCCC-
Confidence 355666755 88888874332 25889999999 688877521 1134568999998 65554 6765443
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
.....|||||+.+++.+... ..+.+++
T Consensus 112 -----~~~~~~s~dg~~~~~~s~~~------------------------------------------------~~~~l~d 138 (582)
T 3o4h_A 112 -----MRILSGVDTGEAVVFTGATE------------------------------------------------DRVALYA 138 (582)
T ss_dssp -----BEEEEEEECSSCEEEEEECS------------------------------------------------SCEEEEE
T ss_pred -----ceeeeeCCCCCeEEEEecCC------------------------------------------------CCceEEE
Confidence 34669999998877764311 2233558
Q ss_pred c-CCCceecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCC
Q 005240 164 L-DGTAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVRE 242 (706)
Q Consensus 164 l-~g~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~ 242 (706)
+ +|+.++++.... ..++|||||++|++.+..... ...|++||+++++.++|+.....
T Consensus 139 ~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~---------~~~i~~~d~~~g~~~~l~~~~~~------------ 196 (582)
T 3o4h_A 139 LDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGG---------RVSLFTSNLSSGGLRVFDSGEGS------------ 196 (582)
T ss_dssp EETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETT---------EEEEEEEETTTCCCEEECCSSCE------------
T ss_pred ccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCC---------CeEEEEEcCCCCCceEeecCCCc------------
Confidence 8 557777765533 788999999999988766432 24799999998888888765432
Q ss_pred CCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccce--------ecCCCceEE
Q 005240 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVS--------WCDDSLALV 314 (706)
Q Consensus 243 g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~--------wspDg~~l~ 314 (706)
...++|||||+. |+ ....++ ...|+++|+ ++++.+.++.....+..+. ||||| .++
T Consensus 197 -~~~~~~SpDG~~-l~-~~~~~~---------~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~ 260 (582)
T 3o4h_A 197 -FSSASISPGMKV-TA-GLETAR---------EARLVTVDP---RDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLA 260 (582)
T ss_dssp -EEEEEECTTSCE-EE-EEECSS---------CEEEEEECT---TTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEE
T ss_pred -cccceECCCCCE-EE-EccCCC---------eeEEEEEcC---CCCcEEEccCCCcChhhhhhccccceeEcCCC-cEE
Confidence 236799999997 66 322211 125999999 7777774445566677788 99999 666
Q ss_pred EEeeccccceEEEEE
Q 005240 315 NETWYKTSQTRTWLV 329 (706)
Q Consensus 315 ~~~~~~~~~~~l~~~ 329 (706)
+....+ +..+||.+
T Consensus 261 ~~~~~~-g~~~l~~~ 274 (582)
T 3o4h_A 261 VVARRE-GRSAVFID 274 (582)
T ss_dssp EEEEET-TEEEEEET
T ss_pred EEEEcC-CcEEEEEE
Confidence 655443 45667766
No 45
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.73 E-value=3e-17 Score=168.75 Aligned_cols=193 Identities=18% Similarity=0.167 Sum_probs=146.2
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHH-HCCe
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRF 556 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~ 556 (706)
..+..+.+++.+.||.+|++++|.|.+ ++.|+||++|||++.. ++... ....+..|+ +.||
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~------~~~p~vv~~HGgG~~~--------g~~~~----~~~~~~~la~~~g~ 117 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP------TPAPVVVYCHAGGFAL--------GNLDT----DHRQCLELARRARC 117 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC------SSEEEEEEECCSTTTS--------CCTTT----THHHHHHHHHHHTS
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC------CCCcEEEEECCCcCcc--------CChHH----HHHHHHHHHHHcCC
Confidence 346788999999999999999999975 2479999999986532 11111 123455666 4699
Q ss_pred EEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEechHHHHHHHHHHhCCC----ceeE
Q 005240 557 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCC 629 (706)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~---~~id~~~i~i~G~S~GG~~a~~~~~~~p~----~~~a 629 (706)
.|+.++++...++. ....++|+.++++|+.++ ..+|++||+|+|+|+||++|+.++.+.++ .+++
T Consensus 118 ~vv~~dyr~~p~~~--------~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~ 189 (317)
T 3qh4_A 118 AVVSVDYRLAPEHP--------YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIF 189 (317)
T ss_dssp EEEEECCCCTTTSC--------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCE
T ss_pred EEEEecCCCCCCCC--------CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeE
Confidence 99998887543321 134577888999999885 34789999999999999999999987654 4999
Q ss_pred EEeccCCCCCCCC----------------------------------------------Ccc--------c--hHHHHHH
Q 005240 630 GIARSGSYNKTLT----------------------------------------------PFG--------F--QAERFFD 653 (706)
Q Consensus 630 ~v~~~~~~d~~~~----------------------------------------------~~~--------~--~~~~~~~ 653 (706)
+++.+|+.+.... |.. + +..++.+
T Consensus 190 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~lpP~li~~G~~D~~~~~~~~~a~ 269 (317)
T 3qh4_A 190 QLLHQPVLDDRPTASRSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGEIDPFRDEVLDYAQ 269 (317)
T ss_dssp EEEESCCCCSSCCHHHHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSCCTTCCCEEEEEEEESTTHHHHHHHHH
T ss_pred EEEECceecCCCCcCHHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCcccccCCCCceeEEecCcCCCchhHHHHHH
Confidence 9999998765310 000 0 2248999
Q ss_pred HHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHHhc
Q 005240 654 ALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 654 ~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~f~~~~l~ 696 (706)
+|++.++++++++|||++|.|.. .....+..+.+.+||+++|.
T Consensus 270 ~l~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 270 RLLGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999998742 23457889999999999884
No 46
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.72 E-value=1.2e-16 Score=171.27 Aligned_cols=178 Identities=19% Similarity=0.197 Sum_probs=131.4
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCC
Q 005240 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 573 (706)
Q Consensus 494 ~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 573 (706)
.+.++++.|++ .++.|+||++||++.. . ....+..|+++||.|+.++++|..+.....
T Consensus 144 ~l~~~l~~P~~-----~~~~P~Vv~~hG~~~~--------------~---~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~ 201 (422)
T 3k2i_A 144 RVRATLFLPPG-----PGPFPGIIDIFGIGGG--------------L---LEYRASLLAGHGFATLALAYYNFEDLPNNM 201 (422)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCTTCS--------------C---CCHHHHHHHTTTCEEEEEECSSSTTSCSSC
T ss_pred cEEEEEEcCCC-----CCCcCEEEEEcCCCcc--------------h---hHHHHHHHHhCCCEEEEEccCCCCCCCCCc
Confidence 69999999986 2358999999997421 0 123577889999999998887643322221
Q ss_pred CchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC------------
Q 005240 574 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL------------ 641 (706)
Q Consensus 574 ~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~------------ 641 (706)
.. ..++|+.++++||.++..+|+.+|+|+|+||||++|+.++.++|+ ++++|+.+|......
T Consensus 202 ~~-----~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 275 (422)
T 3k2i_A 202 DN-----ISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPP 275 (422)
T ss_dssp SC-----EETHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECC
T ss_pred cc-----CCHHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCC
Confidence 11 126788899999998888899999999999999999999999987 999999887652100
Q ss_pred -----------------------------------------CCcc---------c----hHHHHHHHHHhCCCc-EEEEE
Q 005240 642 -----------------------------------------TPFG---------F----QAERFFDALKGHGAL-SRLVL 666 (706)
Q Consensus 642 -----------------------------------------~~~~---------~----~~~~~~~~l~~~~~~-~~~~~ 666 (706)
.|.. . ..+++.++|++.+++ +++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~ 355 (422)
T 3k2i_A 276 LGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIIC 355 (422)
T ss_dssp CCBCGGGCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred cccchhhcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 0100 0 013678889999988 99999
Q ss_pred eCCCCccCCCc---------------------------ccHHHHHHHHHHHHHHHhccCC
Q 005240 667 LPFEHHVYAAR---------------------------ENVMHVIWETDRWLQKYCLSNT 699 (706)
Q Consensus 667 ~~~~~H~~~~~---------------------------~~~~~~~~~~~~f~~~~l~~~~ 699 (706)
||+++|.+..+ ....+.++.+++||++||....
T Consensus 356 ~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~~ 415 (422)
T 3k2i_A 356 YPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQ 415 (422)
T ss_dssp ETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred ECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999998322 3367899999999999997644
No 47
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.71 E-value=1.7e-15 Score=153.03 Aligned_cols=280 Identities=9% Similarity=0.063 Sum_probs=190.4
Q ss_pred eeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCC
Q 005240 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (706)
Q Consensus 36 ~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~ 115 (706)
-.+++||++|+|... .+...||.++.+++..++|+... + -.++++|++|+|..........
T Consensus 19 g~~~~~g~~iy~~n~--------~d~~~ly~~~~dg~~~~~l~~~~-------~--~~i~~~g~~Iyy~~~~~~~~~~-- 79 (302)
T 3s25_A 19 GLFCESDGEVFFSNT--------NDNGRLYAMNIDGSNIHKLSNDT-------A--MYINADKNYVYYVRNNNQKITS-- 79 (302)
T ss_dssp TCEEEETTEEEEEEG--------GGTTEEEEEETTSCSCEEEEEEE-------E--EEEEECSSEEEEEEECC-------
T ss_pred eEEEEeCCEEEEEeC--------CCCceEEEEcCCCCCCEEccCCc-------e--eeEEEcCCEEEEEECCCCcccc--
Confidence 357899999999764 23478999999999999997432 1 2568999999998653221100
Q ss_pred CCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecCCCceEeeeeeCCCCcEEEEEee
Q 005240 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTPAVYTAVEPSPDQKYVLITSM 194 (706)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt~~~~~~~~~~SpDG~~i~~~~~ 194 (706)
. .+.......||+++++| +.++|+... ...|+|+|++|+|+..
T Consensus 80 --------------~-------------------~~~~~n~~~Iy~i~~dg~~~~~l~~~~---~~~~s~~g~~Iy~~~~ 123 (302)
T 3s25_A 80 --------------Q-------------------TFFSYDRNSLCRIKRNGHGSTVLDPDP---CIYASLIGNYIYYLHY 123 (302)
T ss_dssp ----------------------------------CCSSCCSEEEEEEETTSCCCEEEECSC---EEEEEEETTEEEEEEE
T ss_pred --------------c-------------------ceeccCCCeEEEEeCCCCcceEeecCC---ccEEEEeCCEEEEEee
Confidence 0 00001347899999988 667776552 2378999999999872
Q ss_pred -ccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccC
Q 005240 195 -HRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVS 273 (706)
Q Consensus 195 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~ 273 (706)
... ...|++.+++|+..++|+.... ..++++|+. |||+.. +
T Consensus 124 ~~~~----------~~~Iy~~~~dGs~~~~lt~~~~-----------------~~~~~~g~~-iy~t~~---g------- 165 (302)
T 3s25_A 124 DTQT----------ATSLYRIRIDGEEKKKIKNHYL-----------------FTCNTSDRY-FYYNNP---K------- 165 (302)
T ss_dssp SSSS----------CEEEEEEETTSCCCEEEESSCC-----------------CCSEEETTE-EEEECT---T-------
T ss_pred cCCC----------CceEEEEECCCCCeEEEeCCCc-----------------eEeeEECCE-EEEEeC---C-------
Confidence 211 3589999999998888887642 247889988 998843 1
Q ss_pred ccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCC
Q 005240 274 PRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDP 353 (706)
Q Consensus 274 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~ 353 (706)
+..|+++++ +++..++|..... ..+ ++|++..|+|..+.. ..+|+++++++. ..+.|++...
T Consensus 166 -~~~Iy~~~l---~g~~~~~l~~~~~--~~~-~~P~g~~iy~t~~~~--~~~I~~~~ldG~--~~~~Lt~~~~------- 227 (302)
T 3s25_A 166 -NGQLYRYDT---ASQSEALFYDCNC--YKP-VVLDDTNVYYMDVNR--DNAIVHVNINNP--NPVVLTEANI------- 227 (302)
T ss_dssp -TCCEEEEET---TTTEEEEEECSCE--EEE-EEEETTEEEEEEGGG--TTEEEEECSSSC--CCEECSCSCE-------
T ss_pred -CceEEEEEC---CCCCEEEEeCCCc--cce-eeecCCEEEEEEcCC--CcEEEEEECCCC--CeEEEeCCCc-------
Confidence 125899998 7777777754322 234 459999999976432 268999999994 4566654322
Q ss_pred CCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCcee
Q 005240 354 GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEED 433 (706)
Q Consensus 354 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 433 (706)
++++|+|++|+|.... ....|++++++....++|...+. ..
T Consensus 228 ----~~~~~~g~~Iy~~~~~-------------------~~~~i~~~~~DG~~r~~l~~~~~----------------~~ 268 (302)
T 3s25_A 228 ----EHYNVYGSLIFYQRGG-------------------DNPALCVVKNDGTGFKELAKGEF----------------CN 268 (302)
T ss_dssp ----EEEEEETTEEEEEECS-------------------SSCEEEEEETTSCCCEEEEESCE----------------EE
T ss_pred ----ceEEECCCEEEEEECC-------------------CCcEEEEEECCCCccEEeeCCcc----------------ce
Confidence 4478999999887521 12468888887666666654321 24
Q ss_pred cccCCCEEEEEEecCCCCcEEEEEECCCCceeEee
Q 005240 434 INLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 468 (706)
Q Consensus 434 ~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt 468 (706)
+++.+.+|+|+..... .|+++.+.+...++|.
T Consensus 269 i~i~~d~Iy~td~~~~---~i~~~~~dGs~~~~l~ 300 (302)
T 3s25_A 269 INVTSQYVYFTDFVSN---KEYCTSTQNPDTIKAL 300 (302)
T ss_dssp EEECSSEEEEEETTTC---CEEEEESSSCCSCEEC
T ss_pred EEEeCCEEEEEECCCC---eEEEEECCCCCceEec
Confidence 5667889999865433 3888887666556654
No 48
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.71 E-value=2.3e-16 Score=167.18 Aligned_cols=188 Identities=16% Similarity=0.147 Sum_probs=137.5
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
...+.+.++. ||..|+++++.|++. ++.|+||++||.+.. . ...+...+.|+++||.|+
T Consensus 125 ~~~~~v~~~~-dg~~i~~~l~~p~~~-----~~~P~vl~~hG~~~~--------------~-~~~~~~~~~l~~~G~~v~ 183 (386)
T 2jbw_A 125 PPAERHELVV-DGIPMPVYVRIPEGP-----GPHPAVIMLGGLEST--------------K-EESFQMENLVLDRGMATA 183 (386)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECCSSS-----CCEEEEEEECCSSCC--------------T-TTTHHHHHHHHHTTCEEE
T ss_pred CCeEEEEEEe-CCEEEEEEEEcCCCC-----CCCCEEEEeCCCCcc--------------H-HHHHHHHHHHHhCCCEEE
Confidence 5788899988 899999999999862 358999999886311 1 111234678889999999
Q ss_pred EcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCC
Q 005240 560 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 639 (706)
Q Consensus 560 ~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~ 639 (706)
..+.+|. |.+............++.+++++|.+++.+|+++|+|+|+|+||++++.++.+ |++|+|+|+. |+.+.
T Consensus 184 ~~d~rG~---G~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~ 258 (386)
T 2jbw_A 184 TFDGPGQ---GEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSD 258 (386)
T ss_dssp EECCTTS---GGGTTTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSC
T ss_pred EECCCCC---CCCCCCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCCh
Confidence 9887753 33311111112234567788999999888999999999999999999999999 7999999999 88764
Q ss_pred CCCC--------------------cc-------------------------------c---hHHHHHHHH-HhCCCcEEE
Q 005240 640 TLTP--------------------FG-------------------------------F---QAERFFDAL-KGHGALSRL 664 (706)
Q Consensus 640 ~~~~--------------------~~-------------------------------~---~~~~~~~~l-~~~~~~~~~ 664 (706)
.... .. . +..+++++| .. ++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~v~~~~~~~l~~~l~~~---~~~~ 335 (386)
T 2jbw_A 259 LDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDEVPLSFVDTVLELVPAE---HLNL 335 (386)
T ss_dssp STTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSSSCTHHHHHHHHHSCGG---GEEE
T ss_pred HHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCCCCHHHHHHHHHHhcCC---CcEE
Confidence 2100 00 0 111455555 32 7899
Q ss_pred EEeCCCCccCCCcccHHHHHHHHHHHHHHHhccC
Q 005240 665 VLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 698 (706)
Q Consensus 665 ~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~~ 698 (706)
++||+++|.+. ....+..+.+.+||+++|...
T Consensus 336 ~~~~~~gH~~~--~~~~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 336 VVEKDGDHCCH--NLGIRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp EEETTCCGGGG--GGTTHHHHHHHHHHHHHHTSS
T ss_pred EEeCCCCcCCc--cchHHHHHHHHHHHHHhcCCc
Confidence 99999999763 356688999999999999754
No 49
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.71 E-value=1.2e-16 Score=172.13 Aligned_cols=177 Identities=15% Similarity=0.204 Sum_probs=131.5
Q ss_pred EEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCC
Q 005240 494 PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL 573 (706)
Q Consensus 494 ~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~ 573 (706)
.+.+++|.|++ .++.|+||++||++.. . ....+..|+++||.|+.+++++..+.....
T Consensus 160 ~l~~~l~~P~~-----~~~~P~Vv~lhG~~~~--------------~---~~~~a~~La~~Gy~Vla~D~rG~~~~~~~~ 217 (446)
T 3hlk_A 160 RVRGTLFLPPE-----PGPFPGIVDMFGTGGG--------------L---LEYRASLLAGKGFAVMALAYYNYEDLPKTM 217 (446)
T ss_dssp TEEEEEEECSS-----SCCBCEEEEECCSSCS--------------C---CCHHHHHHHTTTCEEEEECCSSSTTSCSCC
T ss_pred eEEEEEEeCCC-----CCCCCEEEEECCCCcc--------------h---hhHHHHHHHhCCCEEEEeccCCCCCCCcch
Confidence 69999999975 2357999999997421 0 113478889999999998887643332221
Q ss_pred CchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC------------
Q 005240 574 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL------------ 641 (706)
Q Consensus 574 ~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~------------ 641 (706)
.. ..++|+.++++|+.++..+|+++|+|+|+||||++|+.++.++|+ ++++|+.+|......
T Consensus 218 ~~-----~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 291 (446)
T 3hlk_A 218 ET-----LHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPP 291 (446)
T ss_dssp SE-----EEHHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECC
T ss_pred hh-----CCHHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCc
Confidence 11 126788899999999888999999999999999999999999987 999999887542100
Q ss_pred -----------------------------------------CCcc---------ch----HHHHHHHHHhCCCc-EEEEE
Q 005240 642 -----------------------------------------TPFG---------FQ----AERFFDALKGHGAL-SRLVL 666 (706)
Q Consensus 642 -----------------------------------------~~~~---------~~----~~~~~~~l~~~~~~-~~~~~ 666 (706)
.|.. .. .++++++|++.+++ +++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~ 371 (446)
T 3hlk_A 292 VGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIIC 371 (446)
T ss_dssp CCBCGGGCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred cccchhccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEE
Confidence 0100 01 13788899999998 89999
Q ss_pred eCCCCccCCC---------------------------cccHHHHHHHHHHHHHHHhccC
Q 005240 667 LPFEHHVYAA---------------------------RENVMHVIWETDRWLQKYCLSN 698 (706)
Q Consensus 667 ~~~~~H~~~~---------------------------~~~~~~~~~~~~~f~~~~l~~~ 698 (706)
||+++|.+.. .....+.++++++||++||...
T Consensus 372 ~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 372 YPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp ETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred ECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999999831 1125679999999999999753
No 50
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.71 E-value=1.3e-15 Score=150.71 Aligned_cols=196 Identities=18% Similarity=0.158 Sum_probs=139.8
Q ss_pred ceE--EEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEE
Q 005240 481 QKE--MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (706)
Q Consensus 481 ~~~--~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (706)
..| .+.+++.+| .+.++++.|.+ . +.|+||++||.+... +..... ....++..|+++||.|
T Consensus 20 ~~e~~~~~~~~~~g-~l~~~~~~p~~---~---~~p~vv~~HG~~~~~--------~~~~~~--~~~~~~~~l~~~G~~v 82 (249)
T 2i3d_A 20 QGHMPEVIFNGPAG-RLEGRYQPSKE---K---SAPIAIILHPHPQFG--------GTMNNQ--IVYQLFYLFQKRGFTT 82 (249)
T ss_dssp ----CEEEEEETTE-EEEEEEECCSS---T---TCCEEEEECCCGGGT--------CCTTSH--HHHHHHHHHHHTTCEE
T ss_pred cCceeEEEEECCCc-eEEEEEEcCCC---C---CCCEEEEECCCcccC--------CCccch--HHHHHHHHHHHCCCEE
Confidence 455 899999888 89999998854 1 368999999953210 010000 0124567788999999
Q ss_pred EEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 559 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
+.++.+| +|.+..........++|+.++++++.++. .++++|+++|+|+||++++.++.++|+ ++++++.+|..+
T Consensus 83 ~~~d~~g---~G~s~~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 157 (249)
T 2i3d_A 83 LRFNFRS---IGRSQGEFDHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPN 157 (249)
T ss_dssp EEECCTT---STTCCSCCCSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTT
T ss_pred EEECCCC---CCCCCCCCCCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchh
Confidence 9977763 44443322222233499999999998875 478899999999999999999999988 999999998765
Q ss_pred CCC--------CCcc---------c---hHHHHHHHHHh-CCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhcc
Q 005240 639 KTL--------TPFG---------F---QAERFFDALKG-HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 639 ~~~--------~~~~---------~---~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~ 697 (706)
... .|.. . ..+++++.+.. .+.+++++++|+++|.+. ....++.+.+.+||++++..
T Consensus 158 ~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~i~~fl~~~l~~ 235 (249)
T 2i3d_A 158 TYDFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFN--GKVDELMGECEDYLDRRLNG 235 (249)
T ss_dssp TSCCTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT--TCHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccc--cCHHHHHHHHHHHHHHhcCC
Confidence 321 1211 0 22367777765 456899999999999986 36778999999999999875
Q ss_pred CCC
Q 005240 698 NTS 700 (706)
Q Consensus 698 ~~~ 700 (706)
...
T Consensus 236 ~~~ 238 (249)
T 2i3d_A 236 ELV 238 (249)
T ss_dssp CSS
T ss_pred CCC
Confidence 443
No 51
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.71 E-value=5.4e-17 Score=163.91 Aligned_cols=198 Identities=18% Similarity=0.153 Sum_probs=134.1
Q ss_pred ceEEEEEEc-cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 481 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 481 ~~~~~~~~~-~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
..+.+++.+ .+|.+++..+|+|++++. +++|+||++||++... ..|.... ...+.+++.||+|+
T Consensus 15 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~---~~~p~vv~lHG~~~~~--------~~~~~~~----~~~~~~~~~g~~vv 79 (282)
T 3fcx_A 15 LQKVFEHDSVELNCKMKFAVYLPPKAET---GKCPALYWLSGLTCTE--------QNFISKS----GYHQSASEHGLVVI 79 (282)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGT---SCEEEEEEECCTTCCS--------HHHHHHS----CCHHHHHHHTCEEE
T ss_pred cEEEEEEEchhcCCeeEEEEEcCCCCCC---CCCCEEEEEcCCCCCc--------cchhhcc----hHHHHhhcCCeEEE
Confidence 344555554 478899999999987543 2599999999975321 1111110 12466778999999
Q ss_pred EcCC--CCcCCCC----------CCCCc----hhhHH--HHHHHH-HHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHH
Q 005240 560 AGPS--IPIIGEG----------DKLPN----DRFVE--QLVSSA-EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLL 620 (706)
Q Consensus 560 ~~~~--~~~~g~g----------~~~~~----~~~~~--~~~~D~-~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~ 620 (706)
.++. +|..+.| ..+.. ..+.. ....++ ..+++++.++..+|++||+|+|+|+||++|+.++
T Consensus 80 ~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a 159 (282)
T 3fcx_A 80 APDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICA 159 (282)
T ss_dssp EECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHH
T ss_pred EeccccCccccccccccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHH
Confidence 9776 4433211 11111 11111 112222 2445555545448999999999999999999999
Q ss_pred HhCCCceeEEEeccCCCCCCC-----------------------------------CCcc--------------chHHHH
Q 005240 621 AHAPHLFCCGIARSGSYNKTL-----------------------------------TPFG--------------FQAERF 651 (706)
Q Consensus 621 ~~~p~~~~a~v~~~~~~d~~~-----------------------------------~~~~--------------~~~~~~ 651 (706)
.++|++|+++++.+|..+... .|.. ...+++
T Consensus 160 ~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~ 239 (282)
T 3fcx_A 160 LKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNF 239 (282)
T ss_dssp HTSTTTSSCEEEESCCCCGGGSHHHHHHHHHHHC---CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHH
T ss_pred HhCcccceEEEEeCCccCcccCchhHHHHHHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHH
Confidence 999999999999999765221 0100 012378
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 652 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 652 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
.++|++.++++++++|||++|.|.. ......+.++|+.++|+
T Consensus 240 ~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 240 IAACTEKKIPVVFRLQEDYDHSYYF---IATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHTTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCceEEEECCCCCcCHHH---HHhhhHHHHHHHHHhhc
Confidence 9999999999999999999998753 45677888999999885
No 52
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.70 E-value=2.2e-15 Score=172.22 Aligned_cols=272 Identities=14% Similarity=0.126 Sum_probs=173.5
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..++|||||++|||+.+. .++....|+++|+++|+..+.+.... ....++|| ||+.|+|.+......
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~-----~G~~~~~i~v~dl~tg~~~~~~~~~~-----k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSL-----AGSDWREIHLMDVESKQPLETPLKDV-----KFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp EEEEEEECTTSSEEEEEEEC-----SSCCEEEEEEEETTTCSEEEEEEEEE-----ESCCCEEE-TTTEEEEEESSCCC-
T ss_pred EEEEEEECCCCCEEEEEEec-----CCCceEEEEEEECCCCCCCccccCCc-----eeccEEEe-CCCEEEEEEecCccc
Confidence 45678999999999999863 12445889999999999776532111 03578999 999999987542100
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC--CceecCCC-c----eEeeeeeC
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--TAKDFGTP-A----VYTAVEPS 183 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g--~~~~lt~~-~----~~~~~~~S 183 (706)
. . . .. .....+||++++ ++ +.+.+... . ....+.||
T Consensus 199 ~---~-------~--~~------------------------~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~S 242 (693)
T 3iuj_A 199 S---E-------L--SA------------------------RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVT 242 (693)
T ss_dssp ------------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEEC
T ss_pred c---c-------c--cc------------------------cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEc
Confidence 0 0 0 00 002267999998 44 33445433 2 35678999
Q ss_pred CCCcEEEEEeeccCcccccccccccceEEEEecCCC--eeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEE
Q 005240 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~ 261 (706)
|||++|+++...... .++|++++++++ +.++|+..... . ...|+++|+. |++..
T Consensus 243 pDg~~l~~~~~~~~~---------~~~i~~~d~~~~~~~~~~l~~~~~~-------------~-~~~~~~~g~~-l~~~t 298 (693)
T 3iuj_A 243 EDDRFLLISAANSTS---------GNRLYVKDLSQENAPLLTVQGDLDA-------------D-VSLVDNKGST-LYLLT 298 (693)
T ss_dssp TTSCEEEEEEESSSS---------CCEEEEEETTSTTCCCEEEECSSSS-------------C-EEEEEEETTE-EEEEE
T ss_pred CCCCEEEEEEccCCC---------CcEEEEEECCCCCCceEEEeCCCCc-------------e-EEEEeccCCE-EEEEE
Confidence 999999998765422 358999999865 56666554321 1 1238899988 88876
Q ss_pred eccCCCCccccCccceeeeecCCCCCCCCc---eEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCc
Q 005240 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (706)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 338 (706)
+.+. .+..|+.+|+ +++.. +.|+....... .|+++++.|++.... ++..+|++++++++ ..
T Consensus 299 ~~~~--------~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~-~g~~~l~~~d~~g~--~~ 362 (693)
T 3iuj_A 299 NRDA--------PNRRLVTVDA---ANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMV-DATARVEQFDYEGK--RV 362 (693)
T ss_dssp CTTC--------TTCEEEEEET---TSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEE-TTEEEEEEECTTSC--EE
T ss_pred CCCC--------CCCEEEEEeC---CCCCccccEEEecCCCCEE--EEEEECCEEEEEEEE-CCeeEEEEEECCCC--ee
Confidence 5432 2236899998 55554 66665544433 899999999887644 35678999999873 33
Q ss_pred eeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecc
Q 005240 339 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 413 (706)
Q Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (706)
+.+.-.....+ ..+.+++|++.+++....- ..-..++.+|+++++.+.+...
T Consensus 363 ~~l~~p~~~~~------~~~~~~~d~~~l~~~~ss~-----------------~tP~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 363 REVALPGLGSV------SGFNGKHDDPALYFGFENY-----------------AQPPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp EEECCSSSSEE------EECCCCTTCSCEEEEEECS-----------------SSCCEEEEECTTTCCEEEEECC
T ss_pred EEeecCCCceE------EeeecCCCCCEEEEEecCC-----------------CCCCEEEEEECCCCeEEEEEeC
Confidence 44321111111 1234578888887765321 1123588899988877666544
No 53
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.70 E-value=1.9e-15 Score=157.59 Aligned_cols=284 Identities=11% Similarity=0.012 Sum_probs=160.9
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
+|++..++. ..|+.++++..........++|||||+ |+++... .+...|+++++++++.+++......
T Consensus 17 ~i~v~~~d~--~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~-------~~~~~v~~~~~~~g~~~~~~~~~~~-- 84 (347)
T 3hfq_A 17 GIYQGTLDT--TAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE-------DDEGGIAAWQIDGQTAHKLNTVVAP-- 84 (347)
T ss_dssp EEEEEEEET--TTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE-------TTEEEEEEEEEETTEEEEEEEEEEE--
T ss_pred CEEEEEEcC--CCCeEEEeeeeeccCCcceEEEccCCe-EEEEEec-------CCCceEEEEEecCCcEEEeeeeecC--
Confidence 577777765 557777765444455677899999999 6555431 2347899999988887766531110
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-
Q 005240 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL- 164 (706)
Q Consensus 86 ~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l- 164 (706)
...+..++|||||++|++..... +.+.++++
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~------------------------------------------------~~v~v~~~~ 116 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHK------------------------------------------------GTAEVMKIA 116 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTT------------------------------------------------TEEEEEEEC
T ss_pred CCCCEEEEECCCCCEEEEEeCCC------------------------------------------------CEEEEEEeC
Confidence 11256789999999988764210 23333333
Q ss_pred -CCCceecCCC-------------ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC-CCeeEEcccCCC
Q 005240 165 -DGTAKDFGTP-------------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPP 229 (706)
Q Consensus 165 -~g~~~~lt~~-------------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~ 229 (706)
+|..+.+... ..+..++|||||+ |++.... ...|++|+++ +++...+.....
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~------------~~~v~~~~~~~~g~~~~~~~~~~ 183 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG------------SDKVYVYNVSDAGQLSEQSVLTM 183 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT------------TTEEEEEEECTTSCEEEEEEEEC
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC------------CCEEEEEEECCCCcEEEeeeEEc
Confidence 3333222110 2366799999999 6554432 2479999998 555444322111
Q ss_pred CCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec---c------cc
Q 005240 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL---D------LR 300 (706)
Q Consensus 230 ~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~------~~ 300 (706)
... .++..++|+|||+. |++....+ +.+.+++++. .+++.+.+... . ..
T Consensus 184 ~~g---------~~p~~~~~spdg~~-l~v~~~~~-----------~~v~v~~~~~-~~g~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 3hfq_A 184 EAG---------FGPRHLVFSPDGQY-AFLAGELS-----------SQIASLKYDT-QTGAFTQLGIVKTIPADYTAHNG 241 (347)
T ss_dssp CTT---------CCEEEEEECTTSSE-EEEEETTT-----------TEEEEEEEET-TTTEEEEEEEEESSCTTCCSCCE
T ss_pred CCC---------CCCceEEECCCCCE-EEEEeCCC-----------CEEEEEEecC-CCCceEEeeeeeecCCCCCCCCc
Confidence 100 13447899999986 66542111 2355555521 24544333221 1 23
Q ss_pred cccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceE
Q 005240 301 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIY 380 (706)
Q Consensus 301 ~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 380 (706)
...++|+|||++|++... ..+...+|.++.+ ++...+...... ......++|+|||++|++....
T Consensus 242 ~~~i~~spdG~~l~v~~~-~~~~v~v~~~~~~---g~~~~~~~~~~~----~~~~~~~~~spdg~~l~v~~~~------- 306 (347)
T 3hfq_A 242 AAAIRLSHDGHFLYVSNR-GYNTLAVFAVTAD---GHLTLIQQISTE----GDFPRDFDLDPTEAFVVVVNQN------- 306 (347)
T ss_dssp EEEEEECTTSCEEEEEEE-TTTEEEEEEECGG---GCEEEEEEEECS----SSCCCEEEECTTSSEEEEEETT-------
T ss_pred ceeEEECCCCCEEEEEeC-CCCEEEEEEECCC---CcEEEeEEEecC----CCCcCeEEECCCCCEEEEEEcC-------
Confidence 556889999998876543 2233344444422 222333111110 0012247889999998876521
Q ss_pred EEEecCCCCCCCCCCceeeeecCCCceeee
Q 005240 381 ILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (706)
Q Consensus 381 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (706)
.+...+|.+|.++|+.+++
T Consensus 307 -----------~~~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 307 -----------TDNATLYARDLTSGKLSLL 325 (347)
T ss_dssp -----------TTEEEEEEECTTTCCEEEE
T ss_pred -----------CCcEEEEEEeCCCCeEEec
Confidence 1223466678888876655
No 54
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.69 E-value=4.2e-15 Score=170.18 Aligned_cols=295 Identities=13% Similarity=0.061 Sum_probs=180.8
Q ss_pred cceeEeecCCCCCCCCeeeeecCCC---CC--cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeeccc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPD---GA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~---~~--~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~ 79 (706)
..|++.+... |++++|+.... +. .+..++|||||++|||+.+. .++...+|+++|+++|+..+...
T Consensus 94 ~~l~~~~~~~----~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-----~G~~~~~i~v~dl~tg~~~~~~~ 164 (695)
T 2bkl_A 94 AILYWRQGES----GQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-----NAADEAVLHVIDVDSGEWSKVDV 164 (695)
T ss_dssp CEEEEEESTT----SCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-----TTCSCCEEEEEETTTCCBCSSCC
T ss_pred EEEEEEcCCC----CCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-----CCCceEEEEEEECCCCCCcCCcc
Confidence 3467777654 78888874321 11 46789999999999999863 12345799999999998652211
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceE
Q 005240 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (706)
Q Consensus 80 ~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 159 (706)
.... ....+.|||||+.|+|.+...... +.. . ......+|
T Consensus 165 ~~~~----~~~~~~wspDg~~l~~~~~d~~~~---------~~~----~-----------------------~~~~~~~v 204 (695)
T 2bkl_A 165 IEGG----KYATPKWTPDSKGFYYEWLPTDPS---------IKV----D-----------------------ERPGYTTI 204 (695)
T ss_dssp BSCC----TTCCCEECTTSSEEEEEECCCCTT---------SCG----G-----------------------GGGGGCEE
T ss_pred cCcc----cccceEEecCCCEEEEEEecCCCC---------Ccc----c-----------------------cCCCCCEE
Confidence 1111 026789999999999986532211 000 0 00023689
Q ss_pred EEEcc-CCC--ceecCCC----ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCC
Q 005240 160 VLGSL-DGT--AKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (706)
Q Consensus 160 ~~~~l-~g~--~~~lt~~----~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~ 232 (706)
|++++ +++ .+.+... ..+..+.|||||++|++.+..... ..+|++++..+++.++|+.....
T Consensus 205 ~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~---------~~~l~~~~~~~~~~~~l~~~~~~-- 273 (695)
T 2bkl_A 205 RYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS---------ENDVYWKRPGEKDFRLLVKGVGA-- 273 (695)
T ss_dssp EEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT---------EEEEEEECTTCSSCEEEEECSSC--
T ss_pred EEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC---------ceEEEEEcCCCCceEEeecCCCc--
Confidence 99999 443 3344332 356789999999999998866411 35899998877777777654321
Q ss_pred CCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc---eEEeec--ccccccceec
Q 005240 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKL--DLRFRSVSWC 307 (706)
Q Consensus 233 ~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~l~~~--~~~~~~~~ws 307 (706)
.....| +||+ |++..+.+. .+..|+++|+ ++++. +.|... ...+..+.|+
T Consensus 274 -----------~~~~~~-~~g~--l~~~s~~~~--------~~~~l~~~d~---~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 274 -----------KYEVHA-WKDR--FYVLTDEGA--------PRQRVFEVDP---AKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp -----------CEEEEE-ETTE--EEEEECTTC--------TTCEEEEEBT---TBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred -----------eEEEEe-cCCc--EEEEECCCC--------CCCEEEEEeC---CCCCccCCeEEecCCCCCeEEEEEEE
Confidence 223345 7776 666644321 1236899998 55553 566543 3456678888
Q ss_pred CCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCC
Q 005240 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG 387 (706)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g 387 (706)
++ .|++... .++..+||.++++++ ..+.+.-..... ...++++|||+.+++.....
T Consensus 329 -~~-~lv~~~~-~dg~~~l~~~~~~g~--~~~~l~~~~~~~------v~~~~~s~d~~~l~~~~ss~------------- 384 (695)
T 2bkl_A 329 -GG-HLSLEYL-KDATSEVRVATLKGK--PVRTVQLPGVGA------ASNLMGLEDLDDAYYVFTSF------------- 384 (695)
T ss_dssp -TT-EEEEEEE-ETTEEEEEEEETTCC--EEEECCCSSSSE------ECCCBSCTTCSEEEEEEEET-------------
T ss_pred -CC-EEEEEEE-ECCEEEEEEEeCCCC--eeEEecCCCCeE------EEEeecCCCCCEEEEEEcCC-------------
Confidence 44 4554433 335678999998752 233331110111 11255689999888775321
Q ss_pred CCCCCCCCceeeeecCCCceeeeec
Q 005240 388 FTPEGNIPFLDLFDINTGSKERIWE 412 (706)
Q Consensus 388 ~~~~~~~~~l~~~d~~~g~~~~l~~ 412 (706)
..-..++++|+++|+.+.+..
T Consensus 385 ----~~P~~v~~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 385 ----TTPRQIYKTSVSTGKSELWAK 405 (695)
T ss_dssp ----TEEEEEEEEETTTCCEEEEEE
T ss_pred ----CCCCEEEEEECCCCcEEEEec
Confidence 011257888998888666543
No 55
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.69 E-value=1.2e-15 Score=157.02 Aligned_cols=194 Identities=16% Similarity=0.070 Sum_probs=143.5
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCe
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRF 556 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~ 556 (706)
..+..+.+++.+.+| .+++++|.|.+ .++.|+||++|||++.. ++... ....+..|++ .||
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~-----~~~~p~vv~~HGGg~~~--------g~~~~----~~~~~~~La~~~g~ 122 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKT-----QGPYGVLVYYHGGGFVL--------GDIES----YDPLCRAITNSCQC 122 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSS-----CSCCCEEEEECCSTTTS--------CCTTT----THHHHHHHHHHHTS
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCC-----CCCCcEEEEECCCcccc--------CChHH----HHHHHHHHHHhcCC
Confidence 446788999998777 89999999975 12479999999986532 11111 1245566775 599
Q ss_pred EEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCC-C-CCCcEEEEEechHHHHHHHHHHhCCCce---eEEE
Q 005240 557 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGV-A-DPSRIAVGGHSYGAFMTAHLLAHAPHLF---CCGI 631 (706)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~-i-d~~~i~i~G~S~GG~~a~~~~~~~p~~~---~a~v 631 (706)
.|+.+++++. ++.. ....+.|+.++++|+.+... . |++||+|+|+|+||.+|+.++.+.|++. ++++
T Consensus 123 ~Vv~~Dyrg~---~~~~-----~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~v 194 (323)
T 3ain_A 123 VTISVDYRLA---PENK-----FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQV 194 (323)
T ss_dssp EEEEECCCCT---TTSC-----TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred EEEEecCCCC---CCCC-----CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEE
Confidence 9999888743 3321 12356788899999988631 2 8899999999999999999999887766 8999
Q ss_pred eccCCCCCCCC------------------------------------------------Ccc----------chHHHHHH
Q 005240 632 ARSGSYNKTLT------------------------------------------------PFG----------FQAERFFD 653 (706)
Q Consensus 632 ~~~~~~d~~~~------------------------------------------------~~~----------~~~~~~~~ 653 (706)
+.+|..+.... |.. -+..++++
T Consensus 195 l~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l~P~lii~G~~D~l~~~~~~~a~ 274 (323)
T 3ain_A 195 LIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDLPPALIITAEHDPLRDQGEAYAN 274 (323)
T ss_dssp EESCCCSCCSCCHHHHHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTCCCEEEEEETTCTTHHHHHHHHH
T ss_pred EEeccccCCCCCccHHHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCCCHHHEEECCCCccHHHHHHHHH
Confidence 99987653210 000 01238889
Q ss_pred HHHhCCCcEEEEEeCCCCccCCCc----ccHHHHHHHHHHHHHHHhcc
Q 005240 654 ALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 654 ~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~f~~~~l~~ 697 (706)
+|+..++++++++|||++|.+... ....+..+.+.+||+++|..
T Consensus 275 ~l~~ag~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 322 (323)
T 3ain_A 275 KLLQSGVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG 322 (323)
T ss_dssp HHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHcCCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999998642 33568899999999998753
No 56
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.69 E-value=1.7e-16 Score=164.97 Aligned_cols=236 Identities=11% Similarity=0.040 Sum_probs=149.0
Q ss_pred CEEEEEEecCCCCcEEEEEECCCCceeEeecCC-CC-CCC---CCCCceEEEEEEccCCeEEEEEEEecCCC-CCCCCCC
Q 005240 439 LKILTSKESKTEITQYHILSWPLKKSSQITNFP-HP-YPT---LASLQKEMIKYQRKDGVPLTATLYLPPGY-DQSKDGP 512 (706)
Q Consensus 439 ~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~~-~~-~~~---~~~~~~~~~~~~~~dg~~i~~~l~~P~~~-~~~~~~~ 512 (706)
..+.|...+...+...++++ .+|+..++.... .+ .+. ...+..+.+.+.. +..+.+.+|.|+.. .+ .++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-~~g~~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~--~~~ 82 (338)
T 2o7r_A 8 TTGSSDPNTNLLKYLPIVLN-PDRTITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLPRHALYN--SAK 82 (338)
T ss_dssp ----------CTTTCSCEEC-TTSCEECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEEGGGGGS--SCC
T ss_pred CceeeccCcccccccceEEC-CCCeEEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeCCCCCcC--CCC
Confidence 34555444444444444444 355555542211 11 111 2346788898886 45688889999763 11 235
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHH-HCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVE 591 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~ 591 (706)
.|+||++|||++..++ .... .....+..|+ +.||.|+..++++... . . ....++|+.++++
T Consensus 83 ~p~vv~~HGgg~~~~~--------~~~~--~~~~~~~~la~~~g~~vv~~d~rg~~~---~-~----~~~~~~d~~~~~~ 144 (338)
T 2o7r_A 83 LPLVVYFHGGGFILFS--------AAST--IFHDFCCEMAVHAGVVIASVDYRLAPE---H-R----LPAAYDDAMEALQ 144 (338)
T ss_dssp EEEEEEECCSTTTSCC--------TTBH--HHHHHHHHHHHHHTCEEEEEECCCTTT---T-C----TTHHHHHHHHHHH
T ss_pred ceEEEEEcCCcCcCCC--------CCch--hHHHHHHHHHHHCCcEEEEecCCCCCC---C-C----CchHHHHHHHHHH
Confidence 8999999998753211 1100 0123456677 6899999988875322 1 1 1245789999999
Q ss_pred HHHHcC------CCCCCcEEEEEechHHHHHHHHHHhCCC--------ceeEEEeccCCCCCCC----------------
Q 005240 592 EVVRRG------VADPSRIAVGGHSYGAFMTAHLLAHAPH--------LFCCGIARSGSYNKTL---------------- 641 (706)
Q Consensus 592 ~l~~~~------~id~~~i~i~G~S~GG~~a~~~~~~~p~--------~~~a~v~~~~~~d~~~---------------- 641 (706)
|+.++. .+|++||+|+|+|+||++++.++.+.|+ +++++|+.+|.++...
T Consensus 145 ~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
T 2o7r_A 145 WIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLANDSRLPT 224 (338)
T ss_dssp HHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHTTTCSSSCH
T ss_pred HHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhccCCCcccCH
Confidence 998762 2677999999999999999999999887 8999999988654210
Q ss_pred ----------------------CCcc-------------c----------------hHHHHHHHHHhCCCcEEEEEeCCC
Q 005240 642 ----------------------TPFG-------------F----------------QAERFFDALKGHGALSRLVLLPFE 670 (706)
Q Consensus 642 ----------------------~~~~-------------~----------------~~~~~~~~l~~~~~~~~~~~~~~~ 670 (706)
.|.. + ...+++++|++.+.+++++++|++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 304 (338)
T 2o7r_A 225 FVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERLEKKGVDVVAQFDVGG 304 (338)
T ss_dssp HHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHHHHHTTCEEEEEEESSC
T ss_pred HHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchHHHHHHHHHHHHCCCcEEEEEECCC
Confidence 0000 0 111688999999999999999999
Q ss_pred CccCCC--cccHHHHHHHHHHHHHHHhcc
Q 005240 671 HHVYAA--RENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 671 ~H~~~~--~~~~~~~~~~~~~f~~~~l~~ 697 (706)
+|.+.. +....++.+.+.+||++++..
T Consensus 305 gH~~~~~~~~~~~~~~~~i~~Fl~~~~~~ 333 (338)
T 2o7r_A 305 YHAVKLEDPEKAKQFFVILKKFVVDSCTT 333 (338)
T ss_dssp CTTGGGTCHHHHHHHHHHHHHHHC-----
T ss_pred ceEEeccChHHHHHHHHHHHHHHHhhccc
Confidence 998753 233478899999999998754
No 57
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.69 E-value=3.6e-16 Score=160.34 Aligned_cols=194 Identities=18% Similarity=0.162 Sum_probs=143.9
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHC-Ce
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RF 556 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~ 556 (706)
.....+.+++++.+| .+++++|.|++. .++.|+||++|||++.. ++... ....+..|++. ||
T Consensus 44 ~~~~~~~~~i~~~~g-~l~~~~~~P~~~----~~~~p~vv~~HGGg~~~--------g~~~~----~~~~~~~la~~~g~ 106 (310)
T 2hm7_A 44 PVAEVREFDMDLPGR-TLKVRMYRPEGV----EPPYPALVYYHGGSWVV--------GDLET----HDPVCRVLAKDGRA 106 (310)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEECTTC----CSSEEEEEEECCSTTTS--------CCTTT----THHHHHHHHHHHTS
T ss_pred CcceEEEEEeccCCC-eEEEEEEecCCC----CCCCCEEEEECCCcccc--------CChhH----hHHHHHHHHHhcCC
Confidence 346788899998777 999999999863 12479999999986532 11111 12456677774 99
Q ss_pred EEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEechHHHHHHHHHHhCCC----ceeE
Q 005240 557 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCC 629 (706)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~---~id~~~i~i~G~S~GG~~a~~~~~~~p~----~~~a 629 (706)
.|+.+++++..+.. ....+.|+.++++|+.+.. .+|+++|+|+|+|+||++++.++.+.|+ ++++
T Consensus 107 ~v~~~d~rg~~~~~--------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~ 178 (310)
T 2hm7_A 107 VVFSVDYRLAPEHK--------FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAF 178 (310)
T ss_dssp EEEEECCCCTTTSC--------TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred EEEEeCCCCCCCCC--------CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceE
Confidence 99998887542221 1235788999999998864 3688999999999999999999988765 6999
Q ss_pred EEeccCCCCCC--C--------------------------------------C-----------Ccc----------chH
Q 005240 630 GIARSGSYNKT--L--------------------------------------T-----------PFG----------FQA 648 (706)
Q Consensus 630 ~v~~~~~~d~~--~--------------------------------------~-----------~~~----------~~~ 648 (706)
+++.+|..+.. . . |.. -+.
T Consensus 179 ~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~P~lii~G~~D~~~~~~ 258 (310)
T 2hm7_A 179 QLLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLRDVG 258 (310)
T ss_dssp EEEESCCCCCCTTSCCHHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTTHHHH
T ss_pred EEEEcCCcCCCcccCCcchhhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCCCCEEEEEecCCCchHHH
Confidence 99999876543 0 0 000 012
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHHhc
Q 005240 649 ERFFDALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 649 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~f~~~~l~ 696 (706)
.+++++|+..++++++++|||++|.+.. .....+..+.+.+||+++|.
T Consensus 259 ~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 259 KLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 3788999999999999999999998763 12346788999999999873
No 58
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.69 E-value=7.4e-16 Score=155.12 Aligned_cols=195 Identities=16% Similarity=0.124 Sum_probs=134.9
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCC---CCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCe
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGY---DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~---~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 556 (706)
+..+.+++. .+|..+...+|.|+.. .. .++.|+||++|||++.. +... .....+..|+++||
T Consensus 2 m~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~--~~~~p~vv~~HGgg~~~--------~~~~----~~~~~~~~l~~~G~ 66 (277)
T 3bxp_A 2 MQVEQRTLN-TAAHPFQITAYWLDQISDFET--AVDYPIMIICPGGGFTY--------HSGR----EEAPIATRMMAAGM 66 (277)
T ss_dssp EEEEEEEEC-STTCCEEEEEEEECCCCSSSC--CCCEEEEEEECCSTTTS--------CCCT----THHHHHHHHHHTTC
T ss_pred cceEEEEec-cCCCcceEEEEeCCccccccc--CCCccEEEEECCCcccc--------CCCc----cchHHHHHHHHCCC
Confidence 345677774 4788999999999831 22 23589999999986432 1111 11245677888999
Q ss_pred EEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEechHHHHHHHHHHhC----------
Q 005240 557 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA---------- 623 (706)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~---~id~~~i~i~G~S~GG~~a~~~~~~~---------- 623 (706)
.|+.+++++....+. .....+.|+.++++|+.+.. .+|+++|+|+|+|+||++|+.++.+.
T Consensus 67 ~v~~~d~~g~g~~~~------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 140 (277)
T 3bxp_A 67 HTVVLNYQLIVGDQS------VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYH 140 (277)
T ss_dssp EEEEEECCCSTTTCC------CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTT
T ss_pred EEEEEecccCCCCCc------cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccC
Confidence 999977765311111 12245778888999998752 27888999999999999999999985
Q ss_pred ----CCceeEEEeccCCCCCC-------------------C----------CCcc------------chHHHHHHHHHhC
Q 005240 624 ----PHLFCCGIARSGSYNKT-------------------L----------TPFG------------FQAERFFDALKGH 658 (706)
Q Consensus 624 ----p~~~~a~v~~~~~~d~~-------------------~----------~~~~------------~~~~~~~~~l~~~ 658 (706)
+.+++++++.+|..+.. . .|.. -+..+++++|...
T Consensus 141 ~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~ 220 (277)
T 3bxp_A 141 LDHYQGQHAAIILGYPVIDLTAGFPTTSAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQH 220 (277)
T ss_dssp CTTCCCCCSEEEEESCCCBTTSSSSSSHHHHHHHCSCGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHT
T ss_pred cccccCCcCEEEEeCCcccCCCCCCCccccchhccchhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHC
Confidence 67899999999986421 0 0110 0234899999999
Q ss_pred CCcEEEEEeCCCCccCCCcc--------------cHHHHHHHHHHHHHHHh
Q 005240 659 GALSRLVLLPFEHHVYAARE--------------NVMHVIWETDRWLQKYC 695 (706)
Q Consensus 659 ~~~~~~~~~~~~~H~~~~~~--------------~~~~~~~~~~~f~~~~l 695 (706)
+.++++++|++++|.+.... ...++++.+.+||+++.
T Consensus 221 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 221 QVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp TCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 99999999999999775332 24678899999999875
No 59
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.68 E-value=3.4e-14 Score=146.78 Aligned_cols=299 Identities=9% Similarity=-0.003 Sum_probs=173.3
Q ss_pred ceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCC
Q 005240 35 FVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPK 114 (706)
Q Consensus 35 ~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~ 114 (706)
.+.|++++++++.+. .....|.++|+++++.......+.. .. .++|+|||++|++...
T Consensus 2 ~~~~~~~~~~~~v~~---------~~~~~v~~~d~~~~~~~~~~~~~~~----~~-~~~~s~dg~~l~~~~~-------- 59 (331)
T 3u4y_A 2 NAMFQTTSNFGIVVE---------QHLRRISFFSTDTLEILNQITLGYD----FV-DTAITSDCSNVVVTSD-------- 59 (331)
T ss_dssp -----CCCCEEEEEE---------GGGTEEEEEETTTCCEEEEEECCCC----EE-EEEECSSSCEEEEEES--------
T ss_pred ceeEcCCCCEEEEEe---------cCCCeEEEEeCcccceeeeEEccCC----cc-eEEEcCCCCEEEEEeC--------
Confidence 456788888875544 3346899999999887665433322 24 8899999998877642
Q ss_pred CCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC--ceecCCCceEee-eeeCCCCcEEE
Q 005240 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--AKDFGTPAVYTA-VEPSPDQKYVL 190 (706)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~--~~~lt~~~~~~~-~~~SpDG~~i~ 190 (706)
....|+++++ +++ ...+..+..... ++|||||++|+
T Consensus 60 ----------------------------------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 99 (331)
T 3u4y_A 60 ----------------------------------------FCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV 99 (331)
T ss_dssp ----------------------------------------TTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred ----------------------------------------CCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE
Confidence 1258999999 555 334444444445 89999999998
Q ss_pred EEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCcc
Q 005240 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV 270 (706)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~ 270 (706)
....... ...|++|++++++........ ..+..++|+|||+. |++... ..
T Consensus 100 -~~~~~~~---------~~~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~spdg~~-l~~~~~-~~----- 149 (331)
T 3u4y_A 100 -TVTGLNH---------PFNMQSYSFLKNKFISTIPIP-------------YDAVGIAISPNGNG-LILIDR-SS----- 149 (331)
T ss_dssp -ECCCSSS---------SCEEEEEETTTTEEEEEEECC-------------TTEEEEEECTTSSC-EEEEEE-TT-----
T ss_pred -EecCCCC---------cccEEEEECCCCCeEEEEECC-------------CCccceEECCCCCE-EEEEec-CC-----
Confidence 4433210 128999999977655433221 12347899999997 665432 11
Q ss_pred ccCccce-eeeecCCCCCCCCce----EEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCC-CceeeecC
Q 005240 271 EVSPRDI-IYTQPAEPAEGEKPE----ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV-APRVLFDR 344 (706)
Q Consensus 271 ~~~~~~~-l~~~d~~~~~~~~~~----~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~-~~~~l~~~ 344 (706)
.. +++++++ ..+... .+.........+.|+|||+.+++.... ...|+++|+.+++. +.......
T Consensus 150 -----~~~i~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~~~~~~~~~~ 219 (331)
T 3u4y_A 150 -----ANTVRRFKID--ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI---GNSIGILETQNPENITLLNAVGT 219 (331)
T ss_dssp -----TTEEEEEEEC--TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT---TTEEEEEECSSTTSCEEEEEEEC
T ss_pred -----CceEEEEEEC--CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC---CCeEEEEECCCCcccceeeeccC
Confidence 12 5555552 223321 122223446778999999988776422 34588888887431 00222221
Q ss_pred cccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhh
Q 005240 345 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 424 (706)
Q Consensus 345 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 424 (706)
. .....+.|+|||+++++.... ...++.+|+++++.+.+...... +.....
T Consensus 220 ~-------~~~~~~~~spdg~~l~v~~~~--------------------~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~ 270 (331)
T 3u4y_A 220 N-------NLPGTIVVSRDGSTVYVLTES--------------------TVDVFNFNQLSGTLSFVKSFGHG--LLIDPR 270 (331)
T ss_dssp S-------SCCCCEEECTTSSEEEEECSS--------------------EEEEEEEETTTTEEEEEEEEECC--CCCCCG
T ss_pred C-------CCCceEEECCCCCEEEEEEcC--------------------CCEEEEEECCCCceeeecccccc--cccCCC
Confidence 1 112347889999988776421 11366788888876444221110 000000
Q ss_pred hccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEe
Q 005240 425 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 467 (706)
Q Consensus 425 ~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~l 467 (706)
.......+.|||||++|+++.... ..|.+||+.+.....+
T Consensus 271 ~~~~~~~~~~spdg~~l~v~~~~~---~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 271 PLFGANQMALNKTETKLFISANIS---RELKVFTISGKVVGYV 310 (331)
T ss_dssp GGTTCCCEEECTTSSEEEEEETTT---TEEEEEETTSCEEEEC
T ss_pred CcccccceEECCCCCEEEEecCCC---CcEEEEEecCCcccce
Confidence 001112468999999887664432 4688999876554433
No 60
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.68 E-value=2.6e-16 Score=158.79 Aligned_cols=195 Identities=15% Similarity=0.137 Sum_probs=133.5
Q ss_pred ceEEEEEEc-cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 481 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 481 ~~~~~~~~~-~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
..+.+++.+ .+|.+++..+|.|+++++.+ ++|+||++||++... ..|.... ...+.+++.||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~P~vv~lHG~~~~~--------~~~~~~~----~~~~~~~~~g~~vv 79 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGASESN--KVPVLYWLSGLTCTD--------ENFMQKA----GAFKKAAELGIAIV 79 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCBTTB--CEEEEEEECCTTCCS--------HHHHHHS----CCHHHHHHHTCEEE
T ss_pred eEEEEEEechhcCCceEEEEEcCCCCCCCC--CcCEEEEeCCCCCCh--------hhhhcch----hHHHHHhhCCeEEE
Confidence 456667765 47899999999999876444 599999999975321 1111110 13455667899999
Q ss_pred EcCCC--CcC---------CCCCCCCch----------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHH
Q 005240 560 AGPSI--PII---------GEGDKLPND----------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 618 (706)
Q Consensus 560 ~~~~~--~~~---------g~g~~~~~~----------~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~ 618 (706)
+++.+ |.. |.|..+... .+.....+++. .++.+...+ ++|++|+|+|+||++|+.
T Consensus 80 ~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~-~~~~~l~G~S~GG~~a~~ 155 (280)
T 3ls2_A 80 APDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELP---ALIEQHFPV-TSTKAISGHSMGGHGALM 155 (280)
T ss_dssp ECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHH---HHHHHHSSE-EEEEEEEEBTHHHHHHHH
T ss_pred EeCCcccccccccccccccccCCccccccccccccccccHHHHHHHHHH---HHHHhhCCC-CCCeEEEEECHHHHHHHH
Confidence 97643 211 222221110 22333333333 344444333 489999999999999999
Q ss_pred HHHhCCCceeEEEeccCCCCCCC------------------------------------CCcc-----------ch--HH
Q 005240 619 LLAHAPHLFCCGIARSGSYNKTL------------------------------------TPFG-----------FQ--AE 649 (706)
Q Consensus 619 ~~~~~p~~~~a~v~~~~~~d~~~------------------------------------~~~~-----------~~--~~ 649 (706)
++.++|++|+++++.+|.++... .|.. .+ .+
T Consensus 156 ~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~ 235 (280)
T 3ls2_A 156 IALKNPQDYVSASAFSPIVNPINCPWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQ 235 (280)
T ss_dssp HHHHSTTTCSCEEEESCCSCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHH
T ss_pred HHHhCchhheEEEEecCccCcccCcchhhHHHhhcCchHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHH
Confidence 99999999999999999764221 1210 11 56
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 650 RFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 650 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
+++++|++.++++++++|||++|.+.. +.....++++|+.++|+
T Consensus 236 ~~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 236 NLVAVAKQKDYPLTLEMQTGYDHSYFF---ISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHHHHHTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCceEEEeCCCCCchhh---HHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998752 45677889999999885
No 61
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.68 E-value=3.4e-14 Score=146.79 Aligned_cols=259 Identities=8% Similarity=-0.029 Sum_probs=158.1
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCce--eecccCCC
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESPD 82 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~lt~~~~ 82 (706)
..|.+.|+.. ++......... ... .++|||||++|+++. .+...|+++|+++++. +.+.....
T Consensus 20 ~~v~~~d~~~----~~~~~~~~~~~-~~~-~~~~s~dg~~l~~~~---------~~~~~i~~~d~~~~~~~~~~~~~~~~ 84 (331)
T 3u4y_A 20 RRISFFSTDT----LEILNQITLGY-DFV-DTAITSDCSNVVVTS---------DFCQTLVQIETQLEPPKVVAIQEGQS 84 (331)
T ss_dssp TEEEEEETTT----CCEEEEEECCC-CEE-EEEECSSSCEEEEEE---------STTCEEEEEECSSSSCEEEEEEECSS
T ss_pred CeEEEEeCcc----cceeeeEEccC-Ccc-eEEEcCCCCEEEEEe---------CCCCeEEEEECCCCceeEEecccCCC
Confidence 4688888876 77765543332 234 899999999887765 3346999999998875 33332222
Q ss_pred ccccccccc-eEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 83 ICLNAVFGS-FVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 83 ~~~~~~~~~-~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
... +.|+|||++|+ ...... ....|++
T Consensus 85 ------~~~~~~~s~dg~~l~-~~~~~~---------------------------------------------~~~~i~v 112 (331)
T 3u4y_A 85 ------SMADVDITPDDQFAV-TVTGLN---------------------------------------------HPFNMQS 112 (331)
T ss_dssp ------CCCCEEECTTSSEEE-ECCCSS---------------------------------------------SSCEEEE
T ss_pred ------CccceEECCCCCEEE-EecCCC---------------------------------------------CcccEEE
Confidence 445 89999999988 432100 0137899
Q ss_pred Ecc-CCCce-ecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccce-EEEEecCCC-eeEEcccCCCCCCCCccc
Q 005240 162 GSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQK-VQVWTTDGK-LVRELCDLPPAEDIPVCY 237 (706)
Q Consensus 162 ~~l-~g~~~-~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~-~~~~l~~~~~~~~~p~~~ 237 (706)
+++ +++.. .+........++|+|||++|++..... .. +.+|+++.. ............
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~~------ 174 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSS------------ANTVRRFKIDADGVLFDTGQEFISG------ 174 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETT------------TTEEEEEEECTTCCEEEEEEEEECS------
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCC------------CceEEEEEECCCCcEeecCCccccC------
Confidence 998 45433 333335568999999999988776542 24 888887732 221110000000
Q ss_pred CccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc---eEEeecccccccceecCCCceEE
Q 005240 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFRSVSWCDDSLALV 314 (706)
Q Consensus 238 ~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~l~~~~~~~~~~~wspDg~~l~ 314 (706)
..++..+.|+|||+. |++.... ...|+++|+ ++++. ............+.|+|||+.|+
T Consensus 175 ---~~~~~~~~~spdg~~-l~v~~~~-----------~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 175 ---GTRPFNITFTPDGNF-AFVANLI-----------GNSIGILET---QNPENITLLNAVGTNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp ---SSSEEEEEECTTSSE-EEEEETT-----------TTEEEEEEC---SSTTSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred ---CCCccceEECCCCCE-EEEEeCC-----------CCeEEEEEC---CCCcccceeeeccCCCCCceEEECCCCCEEE
Confidence 022457899999987 6544211 235888888 55665 33333456677899999999887
Q ss_pred EEeeccccceEEEEEcCCCCCCCceee--ecCcccc-cccCCCCCceEeccCCCEEEEee
Q 005240 315 NETWYKTSQTRTWLVCPGSKDVAPRVL--FDRVFEN-VYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 315 ~~~~~~~~~~~l~~~d~~~~~~~~~~l--~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
+... ....|+++|+.++ +.+.+ ....+.. .........+.|+|||++|++..
T Consensus 237 v~~~---~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 291 (331)
T 3u4y_A 237 VLTE---STVDVFNFNQLSG--TLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISA 291 (331)
T ss_dssp EECS---SEEEEEEEETTTT--EEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEE
T ss_pred EEEc---CCCEEEEEECCCC--ceeeecccccccccCCCCcccccceEECCCCCEEEEec
Confidence 7542 2345899999884 33222 1111000 00000112368999999988775
No 62
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.68 E-value=6.6e-15 Score=169.80 Aligned_cols=298 Identities=12% Similarity=0.042 Sum_probs=177.5
Q ss_pred cceeEeecCCCCCCCCeeeeec---CCCCC--cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeeccc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHG---YPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE 79 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~---~~~~~--~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~ 79 (706)
..|++.+...+ .+++.+++.. +..+. .+..++|||||++|||+.+.. ++...+||++|+++|+..+.+.
T Consensus 133 ~~l~~~~~~~~-~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~-----G~e~~~i~v~dl~tg~~~~~~~ 206 (741)
T 1yr2_A 133 SQLLVRPADAP-VGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG-----GSDWRTVKFVGVADGKPLADEL 206 (741)
T ss_dssp CEEEEEETTSC-TTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEET-----TCSEEEEEEEETTTCCEEEEEE
T ss_pred EEEEEEcCCcc-CCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC-----CCceEEEEEEECCCCCCCCccC
Confidence 45677776410 1366777643 22222 567899999999999998631 1334789999999998766531
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceE
Q 005240 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (706)
Q Consensus 80 ~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 159 (706)
... .+..+.|||| +.|+|.+....... + .. .. .....+|
T Consensus 207 ~~~-----~~~~~~wspD-~~l~~~~~~~~~~~--------~-~~--~~------------------------~~~~~~v 245 (741)
T 1yr2_A 207 KWV-----KFSGLAWLGN-DALLYSRFAEPKEG--------Q-AF--QA------------------------LNYNQTV 245 (741)
T ss_dssp EEE-----ESCCCEESTT-SEEEEEECCCC-------------------------------------------CCCCCEE
T ss_pred CCc-----eeccEEEECC-CEEEEEEecCcccc--------c-cc--cc------------------------CCCCCEE
Confidence 111 1357899999 99999864321100 0 00 00 0012579
Q ss_pred EEEcc-CCC--ceecCCC----ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCC--e-eEEcccCCC
Q 005240 160 VLGSL-DGT--AKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--L-VRELCDLPP 229 (706)
Q Consensus 160 ~~~~l-~g~--~~~lt~~----~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~~~l~~~~~ 229 (706)
|++++ +++ .+.+... .....+.|||||++|++.+..... ...+|++++++++ + .+.|+....
T Consensus 246 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~--------~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD--------PVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC--------SCCEEEEEEEETTEECCCEEEECSSS
T ss_pred EEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC--------CcceEEEEECCCCCCcccEEecCCCC
Confidence 99998 443 2334332 246789999999999998865311 1368999999876 5 666664432
Q ss_pred CCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCC--CCceEEeec-cccccccee
Q 005240 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG--EKPEILHKL-DLRFRSVSW 306 (706)
Q Consensus 230 ~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~~~~l~~~-~~~~~~~~w 306 (706)
. . ...++|||+. |++..+.+. .+..|+++|+ ++ ++.+.|+.. ...+..+.|
T Consensus 318 ~-------------~-~~~~~~dg~~-l~~~s~~~~--------~~~~l~~~d~---~~~~~~~~~l~~~~~~~l~~~~~ 371 (741)
T 1yr2_A 318 A-------------Q-WDFVDGVGDQ-LWFVSGDGA--------PLKKIVRVDL---SGSTPRFDTVVPESKDNLESVGI 371 (741)
T ss_dssp S-------------C-EEEEEEETTE-EEEEECTTC--------TTCEEEEEEC---SSSSCEEEEEECCCSSEEEEEEE
T ss_pred c-------------e-EEEEeccCCE-EEEEECCCC--------CCCEEEEEeC---CCCccccEEEecCCCCeEEEEEE
Confidence 1 1 1235699998 887765422 1235899998 44 345566543 334455667
Q ss_pred cCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecC
Q 005240 307 CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGR 386 (706)
Q Consensus 307 spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 386 (706)
+ +..|++.... ++..+||+++++++ ..+.+.-..... ...+.++|||+.|++.....
T Consensus 372 ~--~~~lv~~~~~-dg~~~l~~~~~~g~--~~~~l~~~~~~~------v~~~~~s~d~~~l~~~~ss~------------ 428 (741)
T 1yr2_A 372 A--GNRLFASYIH-DAKSQVLAFDLDGK--PAGAVSLPGIGS------ASGLSGRPGDRHAYLSFSSF------------ 428 (741)
T ss_dssp E--BTEEEEEEEE-TTEEEEEEEETTSC--EEEECBCSSSCE------EEEEECCBTCSCEEEEEEET------------
T ss_pred E--CCEEEEEEEE-CCEEEEEEEeCCCC--ceeeccCCCCeE------EEEeecCCCCCEEEEEEcCC------------
Confidence 6 4456655433 35678999998652 333332111111 11356789998888765321
Q ss_pred CCCCCCCCCceeeeecCCCceeeee
Q 005240 387 GFTPEGNIPFLDLFDINTGSKERIW 411 (706)
Q Consensus 387 g~~~~~~~~~l~~~d~~~g~~~~l~ 411 (706)
..-..++++|+.+|+.+.+.
T Consensus 429 -----~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 429 -----TQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp -----TEEEEEEEEETTTTEEEECS
T ss_pred -----CCCCEEEEEECCCCcEEEEe
Confidence 01125788898888765553
No 63
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.68 E-value=3.7e-16 Score=157.67 Aligned_cols=195 Identities=16% Similarity=0.146 Sum_probs=133.2
Q ss_pred ceEEEEEEc-cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 481 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 481 ~~~~~~~~~-~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
..+.+++.+ .+|.+++..+|.|+++++.+ ++|+||++||++... ..|.... ...+.+++.||+|+
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~p~vv~lHG~~~~~--------~~~~~~~----~~~~~~~~~g~~vv 81 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQASTGA--KVPVLYWLSGLTCSD--------ENFMQKA----GAQRLAAELGIAIV 81 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGTTC--CEEEEEEECCTTCCS--------SHHHHHS----CCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCCCCC--CccEEEEecCCCCCh--------hHHhhcc----cHHHHHhhCCeEEE
Confidence 456666665 47899999999999875433 599999999975321 1111100 13455667899999
Q ss_pred EcCCCCc--C---------CCCCCCCc----h------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHH
Q 005240 560 AGPSIPI--I---------GEGDKLPN----D------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 618 (706)
Q Consensus 560 ~~~~~~~--~---------g~g~~~~~----~------~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~ 618 (706)
.++.++. . |.|..+.. . .+.....+|+ ++++.+...+ ++||+|+|+|+||++|+.
T Consensus 82 ~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~i~l~G~S~GG~~a~~ 157 (280)
T 3i6y_A 82 APDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNEL---PELIESMFPV-SDKRAIAGHSMGGHGALT 157 (280)
T ss_dssp EECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHH---HHHHHHHSSE-EEEEEEEEETHHHHHHHH
T ss_pred EeCCcccccccCcccccccccCccccccccCCCccchhhHHHHHHHHH---HHHHHHhCCC-CCCeEEEEECHHHHHHHH
Confidence 8765321 0 11222111 0 1222233333 3445444334 689999999999999999
Q ss_pred HHHhCCCceeEEEeccCCCCCCC----------------------------------CCcc---------c-h---HHHH
Q 005240 619 LLAHAPHLFCCGIARSGSYNKTL----------------------------------TPFG---------F-Q---AERF 651 (706)
Q Consensus 619 ~~~~~p~~~~a~v~~~~~~d~~~----------------------------------~~~~---------~-~---~~~~ 651 (706)
++.++|++|+++++.+|.++... .|.. . . .+++
T Consensus 158 ~a~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~ 237 (280)
T 3i6y_A 158 IALRNPERYQSVSAFSPINNPVNCPWGQKAFTAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVL 237 (280)
T ss_dssp HHHHCTTTCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHH
T ss_pred HHHhCCccccEEEEeCCccccccCchHHHHHHHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHH
Confidence 99999999999999999765321 1110 0 1 4589
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 652 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 652 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
.++|++.++++++++|||++|.+. .......++++|+.++|+
T Consensus 238 ~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 238 EAAASSNNYPLELRSHEGYDHSYY---FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCceEEEeCCCCccHH---HHHHhHHHHHHHHHhhcc
Confidence 999999999999999999999874 245678899999999885
No 64
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.68 E-value=6.7e-16 Score=159.36 Aligned_cols=196 Identities=19% Similarity=0.135 Sum_probs=144.0
Q ss_pred CCCceEEEEEEccCCe-EEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CC
Q 005240 478 ASLQKEMIKYQRKDGV-PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RR 555 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~-~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G 555 (706)
..++.+.+++.+.+|. ++++++|.|++- .++.|+||++|||++.. ++...+ ...+..|++ .|
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~----~~~~p~vv~~HGgg~~~--------g~~~~~----~~~~~~la~~~G 110 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT----AGPVPVLLWIHGGGFAI--------GTAESS----DPFCVEVARELG 110 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC----CSCEEEEEEECCSTTTS--------CCGGGG----HHHHHHHHHHHC
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC----CCCCcEEEEECCCcccc--------CChhhh----HHHHHHHHHhcC
Confidence 4567889999998887 899999999752 23479999999986432 111111 234566776 69
Q ss_pred eEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEEEechHHHHHHHHHHhCCC----cee
Q 005240 556 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR---GVADPSRIAVGGHSYGAFMTAHLLAHAPH----LFC 628 (706)
Q Consensus 556 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~---~~id~~~i~i~G~S~GG~~a~~~~~~~p~----~~~ 628 (706)
|.|+.+++++ .|+... .....|+.++++|+.+. ..+|++||+|+|+|+||++++.++.+.++ .++
T Consensus 111 ~~Vv~~d~rg---~~~~~~-----~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~ 182 (323)
T 1lzl_A 111 FAVANVEYRL---APETTF-----PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVA 182 (323)
T ss_dssp CEEEEECCCC---TTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCC
T ss_pred cEEEEecCCC---CCCCCC-----CchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCee
Confidence 9999988874 333311 23467888999999874 23788999999999999999999988655 499
Q ss_pred EEEeccCCCCCCCC------------------------------------------------------Ccc---------
Q 005240 629 CGIARSGSYNKTLT------------------------------------------------------PFG--------- 645 (706)
Q Consensus 629 a~v~~~~~~d~~~~------------------------------------------------------~~~--------- 645 (706)
++++.+|..+.... |..
T Consensus 183 ~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~P~li~~G~~D~~ 262 (323)
T 1lzl_A 183 FQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPL 262 (323)
T ss_dssp EEEEESCCCCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTT
T ss_pred EEEEECCccCCCcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccCcccCCCChhheEECCcCCc
Confidence 99999987643210 000
Q ss_pred -chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc---cHHHHHHHHHHHHHHHhcc
Q 005240 646 -FQAERFFDALKGHGALSRLVLLPFEHHVYAARE---NVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 646 -~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~---~~~~~~~~~~~f~~~~l~~ 697 (706)
-+..+++++|+..++++++++|||++|.+.... ...+..+.+.+||++++..
T Consensus 263 ~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 318 (323)
T 1lzl_A 263 RDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRS 318 (323)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhcc
Confidence 012388999999999999999999999875322 2568899999999999854
No 65
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.67 E-value=5.7e-16 Score=156.06 Aligned_cols=195 Identities=16% Similarity=0.116 Sum_probs=132.1
Q ss_pred ceEEEEEEc-cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 481 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 481 ~~~~~~~~~-~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
..+.+++.+ .+|.+++..+|.|++++ ..++|+||++||++... ..|.... ...+.+.+.||+|+
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~--------~~~~~~~----~~~~~~~~~g~~vv 78 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKAI---HEPCPVVWYLSGLTCTH--------ANVMEKG----EYRRMASELGLVVV 78 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG---TSCEEEEEEECCTTCCS--------HHHHHHS----CCHHHHHHHTCEEE
T ss_pred cEEEEEEeccccCCcceEEEEcCCCCC---CCCCCEEEEEcCCCCCc--------cchhhcc----cHHHHHhhCCeEEE
Confidence 455666654 47899999999998764 23589999999974311 0111000 12344556799999
Q ss_pred EcCCCCcC--CCC----------CCCCch----------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHH
Q 005240 560 AGPSIPII--GEG----------DKLPND----------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTA 617 (706)
Q Consensus 560 ~~~~~~~~--g~g----------~~~~~~----------~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~ 617 (706)
.++.++.. ..+ ..+... .+.....+ .+++++.+...+|++||+|+|+|+||++|+
T Consensus 79 ~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~ 155 (278)
T 3e4d_A 79 CPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTE---ELPALIGQHFRADMSRQSIFGHSMGGHGAM 155 (278)
T ss_dssp ECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHT---HHHHHHHHHSCEEEEEEEEEEETHHHHHHH
T ss_pred ecCCcccCcccccccccccccCCccccccCCcCcccchhhHHHHHHH---HHHHHHHhhcCCCcCCeEEEEEChHHHHHH
Confidence 97765221 000 010100 11222222 345566666558889999999999999999
Q ss_pred HHHHhCCCceeEEEeccCCCCCCCC----------------------------------Ccc---------ch----HHH
Q 005240 618 HLLAHAPHLFCCGIARSGSYNKTLT----------------------------------PFG---------FQ----AER 650 (706)
Q Consensus 618 ~~~~~~p~~~~a~v~~~~~~d~~~~----------------------------------~~~---------~~----~~~ 650 (706)
.++.++|++|+++++.+|.++.... |.. .. .++
T Consensus 156 ~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~ 235 (278)
T 3e4d_A 156 TIALKNPERFKSCSAFAPIVAPSSADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWL 235 (278)
T ss_dssp HHHHHCTTTCSCEEEESCCSCGGGCTTTHHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHH
T ss_pred HHHHhCCcccceEEEeCCcccccCCccchhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHH
Confidence 9999999999999999997753211 100 01 348
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 651 FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 651 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
+.++|++.++++++++|||++|.+.. ......++++|+.++|+
T Consensus 236 ~~~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 236 FEEAIKGTDIGLTLRMHDRYDHSYYF---ISTFMDDHLKWHAERLG 278 (278)
T ss_dssp HHHHHTTSSCEEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCceEEEeCCCCcCHHH---HHHHHHHHHHHHHHhcC
Confidence 89999999999999999999998742 45677889999999874
No 66
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.67 E-value=1e-15 Score=155.12 Aligned_cols=188 Identities=16% Similarity=0.128 Sum_probs=139.6
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
+..+.+.++. +|..+.++++.|+ +.|+||++||.+.. ......++..|+++||.|+
T Consensus 4 ~~~~~~~~~~-~g~~l~~~~~~p~--------~~p~vv~~HG~~~~---------------~~~~~~~~~~l~~~g~~v~ 59 (290)
T 3ksr_A 4 AKLSSIEIPV-GQDELSGTLLTPT--------GMPGVLFVHGWGGS---------------QHHSLVRAREAVGLGCICM 59 (290)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEEE--------SEEEEEEECCTTCC---------------TTTTHHHHHHHHTTTCEEE
T ss_pred CceeeEEecC-CCeEEEEEEecCC--------CCcEEEEeCCCCCC---------------cCcHHHHHHHHHHCCCEEE
Confidence 3567788887 8899999999996 26999999997421 1112345677888999999
Q ss_pred EcCCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 560 AGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 560 ~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
..+.+| +|.+... ........+|+.++++++.++..+|+++|+|+|||+||++++.++.++| ++++++.+|..
T Consensus 60 ~~d~~G---~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~ 134 (290)
T 3ksr_A 60 TFDLRG---HEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPAL 134 (290)
T ss_dssp CCCCTT---SGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCC
T ss_pred EeecCC---CCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcch
Confidence 977764 4433221 2245667899999999999888888899999999999999999999997 67777777765
Q ss_pred CCCC---CC-----------------------------------cc---------c---hHHHHHHHHHhCCCcEEEEEe
Q 005240 638 NKTL---TP-----------------------------------FG---------F---QAERFFDALKGHGALSRLVLL 667 (706)
Q Consensus 638 d~~~---~~-----------------------------------~~---------~---~~~~~~~~l~~~~~~~~~~~~ 667 (706)
.... .| .. . ..+++++.|...+ +++++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~ 213 (290)
T 3ksr_A 135 YKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVI 213 (290)
T ss_dssp CCSSCTTSBHHHHHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEE
T ss_pred hhhhhhhcccccccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCC-CceEEEc
Confidence 4210 00 00 0 1126666665554 7899999
Q ss_pred CCCCccCCCcccHHHHHHHHHHHHHHHhcc
Q 005240 668 PFEHHVYAARENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 668 ~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~ 697 (706)
|+++|.+........+.+.+.+||++++..
T Consensus 214 ~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 243 (290)
T 3ksr_A 214 AGADHALSVKEHQQEYTRALIDWLTEMVVG 243 (290)
T ss_dssp TTCCTTCCSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHHhcC
Confidence 999999876556778899999999999864
No 67
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.67 E-value=2e-14 Score=150.65 Aligned_cols=283 Identities=14% Similarity=0.113 Sum_probs=164.4
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
.+|++..++. +.|+.++++.. .......++|||||++|+++...+ +..+...+|.++.++|+.+++.......
T Consensus 27 ~~i~~~~~d~--~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~----~~~~~v~~~~~~~~~g~~~~~~~~~~~~ 99 (361)
T 3scy_A 27 KGIYTFRFNE--ETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFS----KDQAAVSAFAFDKEKGTLHLLNTQKTMG 99 (361)
T ss_dssp CEEEEEEEET--TTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCS----STTCEEEEEEEETTTTEEEEEEEEECSS
T ss_pred CCEEEEEEeC--CCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccC----CCCCcEEEEEEeCCCCcEEEeeEeccCC
Confidence 3688888865 66888887755 445677789999999997776410 0134566677887778877765332110
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
.....+.+ ||++|++.... .+.+.++++
T Consensus 100 --~~p~~~~~--dg~~l~~~~~~------------------------------------------------~~~v~~~~~ 127 (361)
T 3scy_A 100 --ADPCYLTT--NGKNIVTANYS------------------------------------------------GGSITVFPI 127 (361)
T ss_dssp --SCEEEEEE--CSSEEEEEETT------------------------------------------------TTEEEEEEB
T ss_pred --CCcEEEEE--CCCEEEEEECC------------------------------------------------CCEEEEEEe
Confidence 01233444 99987776321 134555555
Q ss_pred --CCCceecCC---------------CceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCe-------
Q 005240 165 --DGTAKDFGT---------------PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL------- 220 (706)
Q Consensus 165 --~g~~~~lt~---------------~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------- 220 (706)
+|....+.. ......++|||||++|++..... ..+.+|+++...
T Consensus 128 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------------~~v~v~~~~~~~~~~~~~~ 195 (361)
T 3scy_A 128 GQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT------------DQIHKFNINPNANADNKEK 195 (361)
T ss_dssp CTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT------------TEEEEEEECTTCCTTTCCC
T ss_pred CCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC------------CEEEEEEEcCCCCcccccc
Confidence 232222210 02346799999999998766432 468888776322
Q ss_pred eE------EcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEE
Q 005240 221 VR------ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (706)
Q Consensus 221 ~~------~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 294 (706)
.. .+....+ .+++.++|+|||+. ||+.... .+.|.++++ ++++.+.+
T Consensus 196 l~~~~~~~~~~~~~~------------~~~~~~~~spdg~~-l~v~~~~-----------~~~v~v~~~---~~g~~~~~ 248 (361)
T 3scy_A 196 FLTKGTPEAFKVAPG------------SGPRHLIFNSDGKF-AYLINEI-----------GGTVIAFRY---ADGMLDEI 248 (361)
T ss_dssp CEEEEEEEEEECCTT------------CCEEEEEECTTSSE-EEEEETT-----------TCEEEEEEE---ETTEEEEE
T ss_pred eeecccccceecCCC------------CCCeEEEEcCCCCE-EEEEcCC-----------CCeEEEEEe---cCCceEEe
Confidence 21 1111111 23457899999986 6644211 124777777 45555444
Q ss_pred eecc------cccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEE
Q 005240 295 HKLD------LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVI 368 (706)
Q Consensus 295 ~~~~------~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~ 368 (706)
.... .....+.|+|||++|++..........||.++..++ +...+...... . ....++|+|||++|+
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g--~~~~~~~~~~g---~--~~~~~~~spdg~~l~ 321 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG--TLTKVGYQLTG---I--HPRNFIITPNGKYLL 321 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC--CEEEEEEEECS---S--CCCEEEECTTSCEEE
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC--cEEEeeEecCC---C--CCceEEECCCCCEEE
Confidence 3221 123478899999988765432134556777776553 33333211111 0 112478899999988
Q ss_pred EeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeee
Q 005240 369 AKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (706)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (706)
+.... .+...+|.+|.++|+.+.+
T Consensus 322 ~~~~~------------------~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 322 VACRD------------------TNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp EEETT------------------TTEEEEEEECTTTCCEEEC
T ss_pred EEECC------------------CCCEEEEEEECCCCcEeec
Confidence 77521 1233566788888876555
No 68
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.67 E-value=1.7e-14 Score=161.31 Aligned_cols=241 Identities=12% Similarity=0.140 Sum_probs=155.7
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
.|.+.+... ...+.+.... ..+...+|||||+.|+.... + ..|.+++..+.....+......
T Consensus 285 ~i~~w~~~~----~~~~~~~~h~--~~v~~~~~~~~~~~l~t~~~--------d--~~i~~w~~~~~~~~~~~~~~~~-- 346 (577)
T 2ymu_A 285 TVKLWNRNG----QLLQTLTGHS--SSVWGVAFSPDGQTIASASD--------D--KTVKLWNRNGQHLQTLTGHSSS-- 346 (577)
T ss_dssp CEEEEETTS----CEEEEECCCS--SCEEEEEECTTSSEEEEEET--------T--SCEEEEETTSCEEEEECCCSSC--
T ss_pred EEEEEeCCC----cEEEEEecCC--CCeEEEEECCCCCEEEEEeC--------C--CeEEEEeCCCCeeEEEeCCCCC--
Confidence 355666432 3333343222 24778899999999987653 3 3566668777776666533332
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC
Q 005240 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (706)
Q Consensus 86 ~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~ 165 (706)
+..++|+|||+.|+..... +.+.+++.+
T Consensus 347 ---v~~~~~s~~g~~l~~~~~d-------------------------------------------------g~v~~~~~~ 374 (577)
T 2ymu_A 347 ---VWGVAFSPDGQTIASASDD-------------------------------------------------KTVKLWNRN 374 (577)
T ss_dssp ---EEEEEECTTSSEEEEEETT-------------------------------------------------SEEEEEETT
T ss_pred ---EEEEEECCCCCEEEEEeCC-------------------------------------------------CEEEEEcCC
Confidence 6788999999998876421 456666776
Q ss_pred C-CceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCC
Q 005240 166 G-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG 243 (706)
Q Consensus 166 g-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g 243 (706)
+ ....+... ..+..++|||||++|+..+.. ..|.+|+.++...+.+..... .
T Consensus 375 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d-------------~~v~~~~~~~~~~~~~~~~~~-------------~ 428 (577)
T 2ymu_A 375 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDD-------------KTVKLWNRNGQLLQTLTGHSS-------------S 428 (577)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSCEEEEETT-------------SEEEEECTTCCEEEEEECCSS-------------C
T ss_pred CCEEEEecCCCCCeEEEEECCCCCEEEEEeCC-------------CEEEEEeCCCCEEEEecCCCC-------------C
Confidence 6 33444444 678899999999999866543 378999988777666654321 2
Q ss_pred CcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccc
Q 005240 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (706)
Q Consensus 244 ~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (706)
+..++|+||++. |+... . ...|.+||. .+.....+......+..+.|+|||+.|+..+.+ +
T Consensus 429 v~~~~~s~d~~~-l~~~~-~-----------d~~v~~w~~---~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d--~- 489 (577)
T 2ymu_A 429 VWGVAFSPDDQT-IASAS-D-----------DKTVKLWNR---NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD--K- 489 (577)
T ss_dssp EEEEEECTTSSE-EEEEE-T-----------TSEEEEEET---TSCEEEEEECCSSCEEEEEECTTSCEEEEEETT--S-
T ss_pred eEEEEECCCCCE-EEEEc-C-----------CCEEEEEEC---CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC--C-
Confidence 447899999986 55332 1 124778887 555556667777888899999999998876522 2
Q ss_pred eEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
.|.++|.++ +....+..... ....+.|+|||++|+...
T Consensus 490 -~i~iw~~~~---~~~~~~~~h~~------~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 490 -TVKLWNRNG---QLLQTLTGHSS------SVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp -EEEEEETTS---CEEEEEECCSS------CEEEEEECTTSSCEEEEE
T ss_pred -EEEEEcCCC---CEEEEEeCCCC------CEEEEEEcCCCCEEEEEE
Confidence 355566544 22222222111 122477899999887654
No 69
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.67 E-value=3.7e-15 Score=154.74 Aligned_cols=195 Identities=16% Similarity=0.155 Sum_probs=138.5
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeE
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (706)
..+..+.+++++.||..|+++++.|++. .++.|+||++||++.. .. .......|+++||+
T Consensus 64 ~~~~~~~~~~~~~dg~~i~~~~~~P~~~----~~~~p~vv~~HG~g~~--------~~--------~~~~~~~l~~~G~~ 123 (337)
T 1vlq_A 64 KTVEAYDVTFSGYRGQRIKGWLLVPKLE----EEKLPCVVQYIGYNGG--------RG--------FPHDWLFWPSMGYI 123 (337)
T ss_dssp SSEEEEEEEEECGGGCEEEEEEEEECCS----CSSEEEEEECCCTTCC--------CC--------CGGGGCHHHHTTCE
T ss_pred CCeEEEEEEEEcCCCCEEEEEEEecCCC----CCCccEEEEEcCCCCC--------CC--------CchhhcchhhCCCE
Confidence 4467899999999999999999999863 2248999999997531 10 11234567889999
Q ss_pred EEEcCCCCcCCCCCC--CCc----------------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHH
Q 005240 558 VLAGPSIPIIGEGDK--LPN----------------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGA 613 (706)
Q Consensus 558 v~~~~~~~~~g~g~~--~~~----------------------~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG 613 (706)
|+.++.+|..+.+.. ... .......+.|+.++++++.++..+|++||+|+|+|+||
T Consensus 124 v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG 203 (337)
T 1vlq_A 124 CFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGG 203 (337)
T ss_dssp EEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHH
T ss_pred EEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHH
Confidence 999887755422110 000 11245678999999999999888899999999999999
Q ss_pred HHHHHHHHhCCCceeEEEeccCCCCCC--------CC-------------------------------------Ccc---
Q 005240 614 FMTAHLLAHAPHLFCCGIARSGSYNKT--------LT-------------------------------------PFG--- 645 (706)
Q Consensus 614 ~~a~~~~~~~p~~~~a~v~~~~~~d~~--------~~-------------------------------------~~~--- 645 (706)
++++.++.+.| +++++++.+|..+.. .. |..
T Consensus 204 ~la~~~a~~~p-~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~ 282 (337)
T 1vlq_A 204 GIALAVSALSK-KAKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSV 282 (337)
T ss_dssp HHHHHHHHHCS-SCCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEE
T ss_pred HHHHHHHhcCC-CccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEEe
Confidence 99999999997 689999888854310 00 000
Q ss_pred ------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhcc
Q 005240 646 ------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 646 ------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~ 697 (706)
...+...+...+...+++++++|+++|.+.. .+..+.+.+||+++|..
T Consensus 283 G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~~----~~~~~~~~~fl~~~l~~ 336 (337)
T 1vlq_A 283 GLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGG----SFQAVEQVKFLKKLFEK 336 (337)
T ss_dssp ETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTH----HHHHHHHHHHHHHHHC-
T ss_pred eCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCCcc----hhhHHHHHHHHHHHHhc
Confidence 0001222223333447899999999999742 35678999999999853
No 70
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.67 E-value=5.4e-16 Score=154.71 Aligned_cols=200 Identities=12% Similarity=0.016 Sum_probs=135.6
Q ss_pred CceEEEEEEcc-CCeEEEEEEEecCCCCC--CCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHH-HCC
Q 005240 480 LQKEMIKYQRK-DGVPLTATLYLPPGYDQ--SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARR 555 (706)
Q Consensus 480 ~~~~~~~~~~~-dg~~i~~~l~~P~~~~~--~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G 555 (706)
+..+.+++.+. .|..+++++|.|++++. ...+++|+||++||++.. . ..+.. ......++ +.|
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~--------~---~~~~~--~~~~~~~~~~~~ 71 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGN--------H---NSWLK--RTNVERLLRGTN 71 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCC--------T---THHHH--HSCHHHHTTTCC
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCC--------H---HHHHh--ccCHHHHHhcCC
Confidence 45677788764 67899999999998621 112358999999997421 0 11100 00133344 489
Q ss_pred eEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 556 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 556 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
|+|+.++++++ ++........+.....+|+...++.+..+..+|+++|+|+|+|+||++|+.++. +|++|+++++.+|
T Consensus 72 ~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~ 149 (263)
T 2uz0_A 72 LIVVMPNTSNG-WYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSG 149 (263)
T ss_dssp CEEEECCCTTS-TTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESC
T ss_pred eEEEEECCCCC-ccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecC
Confidence 99998666433 322211122344555667777666654434468899999999999999999999 8999999999999
Q ss_pred CCCCCCC-----------------------------------------Ccc---------c-hHHHHHHHHHhCCCcEEE
Q 005240 636 SYNKTLT-----------------------------------------PFG---------F-QAERFFDALKGHGALSRL 664 (706)
Q Consensus 636 ~~d~~~~-----------------------------------------~~~---------~-~~~~~~~~l~~~~~~~~~ 664 (706)
..+.... |.. . ...+++++|+..+.++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~l~~~g~~~~~ 229 (263)
T 2uz0_A 150 ALSFQNFSPESQNLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYEANNLAVKNLKKLGFDVTY 229 (263)
T ss_dssp CCCSSSCCGGGTTCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHHHHHHHHHHHHHTTCEEEE
T ss_pred CcchhhccccccccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhhHHHHHHHHHHHHCCCCeEE
Confidence 8764321 100 0 234899999999999999
Q ss_pred EEeCCCCccCCCcccHHHHHHHHHHHHHHHhccC
Q 005240 665 VLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 698 (706)
Q Consensus 665 ~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~~ 698 (706)
++||| +|.+.. .....+.+++||.++|+.+
T Consensus 230 ~~~~g-~H~~~~---~~~~~~~~~~~l~~~l~~~ 259 (263)
T 2uz0_A 230 SHSAG-THEWYY---WEKQLEVFLTTLPIDFKLE 259 (263)
T ss_dssp EEESC-CSSHHH---HHHHHHHHHHHSSSCCCCC
T ss_pred EECCC-CcCHHH---HHHHHHHHHHHHHhhccch
Confidence 99999 998642 3467789999999988754
No 71
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.67 E-value=4.5e-16 Score=159.88 Aligned_cols=192 Identities=18% Similarity=0.113 Sum_probs=141.8
Q ss_pred CCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeE
Q 005240 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFA 557 (706)
Q Consensus 479 ~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~ 557 (706)
....+.+++++.+| .+++++|.|++ ..+.|+||++|||++.. ++... ....+..|++ .||.
T Consensus 48 ~~~~~~~~i~~~~g-~~~~~~~~P~~-----~~~~p~vv~~HGgg~~~--------g~~~~----~~~~~~~la~~~g~~ 109 (313)
T 2wir_A 48 IHRVEDITIPGRGG-PIRARVYRPRD-----GERLPAVVYYHGGGFVL--------GSVET----HDHVCRRLANLSGAV 109 (313)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEECSC-----CSSEEEEEEECCSTTTS--------CCTGG----GHHHHHHHHHHHCCE
T ss_pred CceEEEEEeeCCCC-cEEEEEEecCC-----CCCccEEEEECCCcccC--------CChHH----HHHHHHHHHHHcCCE
Confidence 34678899998777 99999999975 12479999999986432 11111 1245566776 5999
Q ss_pred EEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEechHHHHHHHHHHhCCCc----eeEE
Q 005240 558 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCG 630 (706)
Q Consensus 558 v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~---~id~~~i~i~G~S~GG~~a~~~~~~~p~~----~~a~ 630 (706)
|+.+++++ .|+... .....|+.++++|+.+.. .+|+++|+|+|+|+||.+++.++.+.|++ ++++
T Consensus 110 v~~~d~rg---~g~~~~-----~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~ 181 (313)
T 2wir_A 110 VVSVDYRL---APEHKF-----PAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQ 181 (313)
T ss_dssp EEEEECCC---TTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred EEEeecCC---CCCCCC-----CchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEE
Confidence 99988764 343311 234678888899998752 27888999999999999999999988776 9999
Q ss_pred EeccCCCC-CCC----------------------------------------C----------Ccc----------chHH
Q 005240 631 IARSGSYN-KTL----------------------------------------T----------PFG----------FQAE 649 (706)
Q Consensus 631 v~~~~~~d-~~~----------------------------------------~----------~~~----------~~~~ 649 (706)
++.+|..+ ... . |.. -+.+
T Consensus 182 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~~~~~~ 261 (313)
T 2wir_A 182 VLIYPAVNLTGSPTVSRVEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADLSNLPPALVITAEYDPLRDEGE 261 (313)
T ss_dssp EEESCCCCCSSCCCHHHHHTCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCTTCCCEEEEEEEECTTHHHHH
T ss_pred EEEcCccCCCCCCCcCHHHhcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCcccccCCCcceEEEcCcCcChHHHH
Confidence 99999877 210 0 000 0123
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCccCCCc----ccHHHHHHHHHHHHHHHhc
Q 005240 650 RFFDALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 650 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~f~~~~l~ 696 (706)
+++++|+..++++++++|||++|.+... ....++.+.+.+||+++++
T Consensus 262 ~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 262 LYAHLLKTRGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHCCCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 8899999999999999999999998632 2346888899999998764
No 72
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.67 E-value=1.9e-15 Score=153.44 Aligned_cols=177 Identities=14% Similarity=0.121 Sum_probs=123.5
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHC----C
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR----R 555 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----G 555 (706)
.+.+.+++.+.++ .+..++|+|+++++++ ++|+||++||++.. ...|..........+..|++. +
T Consensus 39 g~~~~~~~~s~~~-~~~~~vy~P~~~~~~~--~~Pvlv~lHG~~~~--------~~~~~~~~~~~~~~~~~l~~~g~~~~ 107 (297)
T 1gkl_A 39 GRIVKETYTGING-TKSLNVYLPYGYDPNK--KYNIFYLMHGGGEN--------ENTIFSNDVKLQNILDHAIMNGELEP 107 (297)
T ss_dssp CEEEEEEEEETTE-EEEEEEEECTTCCTTS--CCEEEEEECCTTCC--------TTSTTSTTTCHHHHHHHHHHTTSSCC
T ss_pred ceEEEEEEEcCCC-EEEEEEEeCCCCCCCC--CCCEEEEECCCCCC--------cchhhcccchHHHHHHHHHHcCCCCC
Confidence 4678899998776 9999999999987543 59999999997531 111221111112345566766 4
Q ss_pred eEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCC------------CCCCcEEEEEechHHHHHHHHHHhC
Q 005240 556 FAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGV------------ADPSRIAVGGHSYGAFMTAHLLAHA 623 (706)
Q Consensus 556 ~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~------------id~~~i~i~G~S~GG~~a~~~~~~~ 623 (706)
|+|++++.++..+. ...+....++|+... +.+... .|+.+++|+|+||||++|++++.++
T Consensus 108 ~ivv~pd~~~~~~~-----~~~~~~~~~~~l~~~---i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~ 179 (297)
T 1gkl_A 108 LIVVTPTFNGGNCT-----AQNFYQEFRQNVIPF---VESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNC 179 (297)
T ss_dssp EEEEECCSCSTTCC-----TTTHHHHHHHTHHHH---HHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHH
T ss_pred EEEEEecCcCCccc-----hHHHHHHHHHHHHHH---HHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhC
Confidence 99999887654322 223434445555544 444322 3678899999999999999999999
Q ss_pred CCceeEEEeccCCCCCCCC--------------------Cc-----------cc-hHHHHHHHHHhCC----------Cc
Q 005240 624 PHLFCCGIARSGSYNKTLT--------------------PF-----------GF-QAERFFDALKGHG----------AL 661 (706)
Q Consensus 624 p~~~~a~v~~~~~~d~~~~--------------------~~-----------~~-~~~~~~~~l~~~~----------~~ 661 (706)
|++|+++++.+|.+.+... +. .+ +.+++.++|++.+ ++
T Consensus 180 p~~f~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~D~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 259 (297)
T 1gkl_A 180 LDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQIEAMKALPHFDYTSDFSKGN 259 (297)
T ss_dssp TTTCCEEEEESCCCCBSSSHHHHHHHHHHHHHHHTCCTTSCEEEEEEETTCTTHHHHHHHHHHHHTSTTCCBBSCTTTCC
T ss_pred chhhheeeEeccccccCCccchhhhHHHHHHhhccCCcCcEEEEEEeCCCcccchhHHHHHHHHHHcCCccccccccCCc
Confidence 9999999999997643210 10 01 2348999999998 69
Q ss_pred EEEEEeCCCCccCC
Q 005240 662 SRLVLLPFEHHVYA 675 (706)
Q Consensus 662 ~~~~~~~~~~H~~~ 675 (706)
+++.+|||++|.+.
T Consensus 260 ~~~~~~~g~gH~~~ 273 (297)
T 1gkl_A 260 FYFLVAPGATHWWG 273 (297)
T ss_dssp EEEEEETTCCSSHH
T ss_pred eEEEECCCCCcCHH
Confidence 99999999999753
No 73
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.67 E-value=2e-15 Score=154.87 Aligned_cols=192 Identities=18% Similarity=0.127 Sum_probs=140.9
Q ss_pred CCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHC-CeE
Q 005240 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFA 557 (706)
Q Consensus 479 ~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~ 557 (706)
....+.+++++.+| .+++++|.|.+ ..+.|+||++|||++.. ++...+ ..++..|++. ||.
T Consensus 45 ~~~~~~~~i~~~~g-~i~~~~~~p~~-----~~~~p~vv~~HGgg~~~--------g~~~~~----~~~~~~la~~~g~~ 106 (311)
T 2c7b_A 45 IAETRDVHIPVSGG-SIRARVYFPKK-----AAGLPAVLYYHGGGFVF--------GSIETH----DHICRRLSRLSDSV 106 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSS-----CSSEEEEEEECCSTTTS--------CCTGGG----HHHHHHHHHHHTCE
T ss_pred cceEEEEEecCCCC-cEEEEEEecCC-----CCCCcEEEEECCCcccC--------CChhhh----HHHHHHHHHhcCCE
Confidence 35778899998777 99999999975 12379999999986421 111111 2345667764 999
Q ss_pred EEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEechHHHHHHHHHHhCCC----ceeEE
Q 005240 558 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPH----LFCCG 630 (706)
Q Consensus 558 v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~---~id~~~i~i~G~S~GG~~a~~~~~~~p~----~~~a~ 630 (706)
|+.+++++ .|+... .....|+.++++|+.+.. .+|++||+|+|+|+||++++.++.+.|+ +++++
T Consensus 107 v~~~d~rg---~g~~~~-----~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~ 178 (311)
T 2c7b_A 107 VVSVDYRL---APEYKF-----PTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQ 178 (311)
T ss_dssp EEEECCCC---TTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEE
T ss_pred EEEecCCC---CCCCCC-----CccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeE
Confidence 99988864 333311 234678889999998752 3688999999999999999999988765 59999
Q ss_pred EeccCCCCC----CC-------------------------------------C----------Ccc--------c--hHH
Q 005240 631 IARSGSYNK----TL-------------------------------------T----------PFG--------F--QAE 649 (706)
Q Consensus 631 v~~~~~~d~----~~-------------------------------------~----------~~~--------~--~~~ 649 (706)
++.+|..+. .. . |.. . +..
T Consensus 179 vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~P~lii~G~~D~~~~~~~ 258 (311)
T 2c7b_A 179 VLIYPVVNMTGVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGLPPALVVTAEYDPLRDEGE 258 (311)
T ss_dssp EEESCCCCCSSCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTCCCEEEEEETTCTTHHHHH
T ss_pred EEECCccCCccccccCCccHHHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccccccCCCcceEEEcCCCCchHHHH
Confidence 999998762 00 0 000 0 122
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCccCCC----cccHHHHHHHHHHHHHHHhc
Q 005240 650 RFFDALKGHGALSRLVLLPFEHHVYAA----RENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 650 ~~~~~l~~~~~~~~~~~~~~~~H~~~~----~~~~~~~~~~~~~f~~~~l~ 696 (706)
.+.++|+..+.++++++|||++|.+.. .....+..+.+.+||++++.
T Consensus 259 ~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 259 LYAYKMKASGSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 688899999999999999999999863 23357888999999999875
No 74
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.67 E-value=4.2e-14 Score=149.82 Aligned_cols=271 Identities=9% Similarity=0.016 Sum_probs=177.7
Q ss_pred CCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccc
Q 005240 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (706)
Q Consensus 59 ~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (706)
.....|+++|+++++..+....... +..+.|+|||++|++...
T Consensus 9 ~~d~~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~-------------------------------- 51 (391)
T 1l0q_A 9 SESDNISVIDVTSNKVTATIPVGSN-----PMGAVISPDGTKVYVANA-------------------------------- 51 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSSS-----EEEEEECTTSSEEEEEEG--------------------------------
T ss_pred CCCCEEEEEECCCCeEEEEeecCCC-----cceEEECCCCCEEEEECC--------------------------------
Confidence 3446899999998887665443332 678899999998876532
Q ss_pred hhccCCchhhhhhhhcccceEEEEcc-CCCce-ecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEec
Q 005240 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTT 216 (706)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~-~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~ 216 (706)
..+.|+++++ +++.. .+.....+..++|+|||++|++..... ..|++||+
T Consensus 52 ----------------~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~------------~~v~v~d~ 103 (391)
T 1l0q_A 52 ----------------HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMAS------------STLSVIDT 103 (391)
T ss_dssp ----------------GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTT------------TEEEEEET
T ss_pred ----------------CCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCC------------CEEEEEEC
Confidence 1267888998 56443 333336788999999999998775432 47999999
Q ss_pred CCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEee
Q 005240 217 DGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK 296 (706)
Q Consensus 217 ~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 296 (706)
.+++........ ..+..+.|+|||+. |++.... ...|+++|+ .+++......
T Consensus 104 ~~~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~~~~~-----------~~~v~~~d~---~~~~~~~~~~ 155 (391)
T 1l0q_A 104 TSNTVAGTVKTG-------------KSPLGLALSPDGKK-LYVTNNG-----------DKTVSVINT---VTKAVINTVS 155 (391)
T ss_dssp TTTEEEEEEECS-------------SSEEEEEECTTSSE-EEEEETT-----------TTEEEEEET---TTTEEEEEEE
T ss_pred CCCeEEEEEeCC-------------CCcceEEECCCCCE-EEEEeCC-----------CCEEEEEEC---CCCcEEEEEe
Confidence 977665443322 12347899999987 6544211 235889998 5565555444
Q ss_pred cccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCC
Q 005240 297 LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEND 376 (706)
Q Consensus 297 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 376 (706)
.......+.|+|||+.|++.... ...|+++|+.++ +......... ....+.|+|||++|++....
T Consensus 156 ~~~~~~~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~--~~~~~~~~~~-------~~~~~~~~~~g~~l~~~~~~--- 220 (391)
T 1l0q_A 156 VGRSPKGIAVTPDGTKVYVANFD---SMSISVIDTVTN--SVIDTVKVEA-------APSGIAVNPEGTKAYVTNVD--- 220 (391)
T ss_dssp CCSSEEEEEECTTSSEEEEEETT---TTEEEEEETTTT--EEEEEEECSS-------EEEEEEECTTSSEEEEEEEC---
T ss_pred cCCCcceEEECCCCCEEEEEeCC---CCEEEEEECCCC--eEEEEEecCC-------CccceEECCCCCEEEEEecC---
Confidence 45566788999999988765422 245888998874 2333222110 11236789999998877521
Q ss_pred cceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEE
Q 005240 377 EQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHI 456 (706)
Q Consensus 377 ~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~ 456 (706)
.....++.+|+.+++......... ....+.|+|||+.|+++.... ..|++
T Consensus 221 ---------------~~~~~v~~~d~~~~~~~~~~~~~~------------~~~~~~~s~dg~~l~~s~~~d---~~v~v 270 (391)
T 1l0q_A 221 ---------------KYFNTVSMIDTGTNKITARIPVGP------------DPAGIAVTPDGKKVYVALSFX---NTVSV 270 (391)
T ss_dssp ---------------SSCCEEEEEETTTTEEEEEEECCS------------SEEEEEECTTSSEEEEEETTT---TEEEE
T ss_pred ---------------cCCCcEEEEECCCCeEEEEEecCC------------CccEEEEccCCCEEEEEcCCC---CEEEE
Confidence 012247778888776544443321 112468999999887765433 57999
Q ss_pred EECCCCceeEe
Q 005240 457 LSWPLKKSSQI 467 (706)
Q Consensus 457 ~~~~~~~~~~l 467 (706)
||+.+++....
T Consensus 271 ~d~~~~~~~~~ 281 (391)
T 1l0q_A 271 IDTATNTITAT 281 (391)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCcEEEE
Confidence 99998866543
No 75
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.66 E-value=8.8e-16 Score=158.27 Aligned_cols=189 Identities=16% Similarity=0.137 Sum_probs=132.1
Q ss_pred CCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeE
Q 005240 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFA 557 (706)
Q Consensus 479 ~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~ 557 (706)
.+..+.+.+ +|..+ +.|++- .. ..|+||++|||++.. ++...+ ...+..|++ .||.
T Consensus 57 ~~~~~~~~~---~g~~~----~~p~~~--~~--~~~~vv~~HGgg~~~--------g~~~~~----~~~~~~la~~~g~~ 113 (322)
T 3k6k_A 57 GVELTLTDL---GGVPC----IRQATD--GA--GAAHILYFHGGGYIS--------GSPSTH----LVLTTQLAKQSSAT 113 (322)
T ss_dssp TCEEEEEEE---TTEEE----EEEECT--TC--CSCEEEEECCSTTTS--------CCHHHH----HHHHHHHHHHHTCE
T ss_pred CceEEEEEE---CCEeE----EecCCC--CC--CCeEEEEEcCCcccC--------CChHHH----HHHHHHHHHhcCCE
Confidence 344555544 66555 567651 11 235599999986532 111111 133455665 5999
Q ss_pred EEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCc----eeEEEec
Q 005240 558 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIAR 633 (706)
Q Consensus 558 v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~----~~a~v~~ 633 (706)
|+.+++++.... . ....++|+.++++|+.++ .+|+++|+|+|+|+||++|+.++.+.|+. ++++++.
T Consensus 114 v~~~dyr~~~~~----~----~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~ 184 (322)
T 3k6k_A 114 LWSLDYRLAPEN----P----FPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVML 184 (322)
T ss_dssp EEEECCCCTTTS----C----TTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEE
T ss_pred EEEeeCCCCCCC----C----CchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEe
Confidence 999888754221 1 124578999999999987 46899999999999999999999887665 9999999
Q ss_pred cCCCCCCCC------------------------------------------------Ccc----------chHHHHHHHH
Q 005240 634 SGSYNKTLT------------------------------------------------PFG----------FQAERFFDAL 655 (706)
Q Consensus 634 ~~~~d~~~~------------------------------------------------~~~----------~~~~~~~~~l 655 (706)
+|..+.... |.. -+..+++++|
T Consensus 185 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~~~~~~~~~~~l 264 (322)
T 3k6k_A 185 SPFVDLTLSRWSNSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALLSDSTTLAERA 264 (322)
T ss_dssp SCCCCTTCCSHHHHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTTHHHHHHHHHHH
T ss_pred cCCcCcccCccchhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCccHHHHHHHHHHH
Confidence 998764311 000 0223889999
Q ss_pred HhCCCcEEEEEeCCCCccCCCc----ccHHHHHHHHHHHHHHHhccCC
Q 005240 656 KGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQKYCLSNT 699 (706)
Q Consensus 656 ~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~f~~~~l~~~~ 699 (706)
+..|+++++++|||++|.|... ....+..+.+.+||+++|....
T Consensus 265 ~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3k6k_A 265 GAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKLA 312 (322)
T ss_dssp HHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC---
T ss_pred HHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999998632 2356889999999999987543
No 76
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.66 E-value=3.7e-15 Score=155.69 Aligned_cols=196 Identities=14% Similarity=0.099 Sum_probs=141.4
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCCC------------CCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCc
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQ------------SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTP 545 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~------------~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~ 545 (706)
..+..+.+.+.. +..+...+|.|+.... ...++.|+||++|||++..++. ... ...
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~--------~~~--~~~ 135 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSA--------NSA--IYD 135 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCT--------TBH--HHH
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCC--------cch--hHH
Confidence 456777888876 4468888999987420 0123589999999987532111 100 012
Q ss_pred hHHHHHH-HCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC----CCCCC-cEEEEEechHHHHHHHH
Q 005240 546 TSSLIFL-ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG----VADPS-RIAVGGHSYGAFMTAHL 619 (706)
Q Consensus 546 ~~~~~l~-~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~----~id~~-~i~i~G~S~GG~~a~~~ 619 (706)
..+..|+ +.||+|+..++++..... ....++|+.++++|+.++. .+|++ ||+|+|+|+||++|+.+
T Consensus 136 ~~~~~la~~~g~~vv~~d~rg~~~~~--------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~ 207 (351)
T 2zsh_A 136 TLCRRLVGLCKCVVVSVNYRRAPENP--------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNV 207 (351)
T ss_dssp HHHHHHHHHHTSEEEEECCCCTTTSC--------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEecCCCCCCCC--------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHH
Confidence 3456777 689999998887642221 1245789999999998754 48999 99999999999999999
Q ss_pred HHhCCC---ceeEEEeccCCCCCCC-----------------------------------------------------CC
Q 005240 620 LAHAPH---LFCCGIARSGSYNKTL-----------------------------------------------------TP 643 (706)
Q Consensus 620 ~~~~p~---~~~a~v~~~~~~d~~~-----------------------------------------------------~~ 643 (706)
+.+.|+ +++++|+.+|.++... .|
T Consensus 208 a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP 287 (351)
T 2zsh_A 208 ALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPK 287 (351)
T ss_dssp HHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCE
T ss_pred HHHhhccCCCeeEEEEECCccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCC
Confidence 999888 8999999988754210 01
Q ss_pred cc--------c--hHHHHHHHHHhCCCcEEEEEeCCCCccCCC---cccHHHHHHHHHHHHHH
Q 005240 644 FG--------F--QAERFFDALKGHGALSRLVLLPFEHHVYAA---RENVMHVIWETDRWLQK 693 (706)
Q Consensus 644 ~~--------~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~~~~~f~~~ 693 (706)
.. . ...+++++|++.++++++++||+++|.+.. .....++.+.+.+||++
T Consensus 288 ~Lii~G~~D~~~~~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 288 SLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp EEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCcchHHHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 00 0 123788999999999999999999998864 24567888899999875
No 77
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.66 E-value=2.9e-16 Score=153.85 Aligned_cols=190 Identities=14% Similarity=0.067 Sum_probs=134.1
Q ss_pred EEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcC
Q 005240 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (706)
Q Consensus 483 ~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 562 (706)
+.+++++.||..+.++++.|++ ++.|+||++||.+.. .. .....+..|+++||.|+.++
T Consensus 4 ~~~~~~~~~g~~l~~~~~~p~~------~~~p~vv~~hG~~~~-----------~~----~~~~~~~~l~~~g~~v~~~d 62 (236)
T 1zi8_A 4 EGISIQSYDGHTFGALVGSPAK------APAPVIVIAQDIFGV-----------NA----FMRETVSWLVDQGYAAVCPD 62 (236)
T ss_dssp TTCCEECTTSCEECEEEECCSS------CSEEEEEEECCTTBS-----------CH----HHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEecCCCCeEEEEEECCCC------CCCCEEEEEcCCCCC-----------CH----HHHHHHHHHHhCCcEEEecc
Confidence 3466777899999999999974 247999999996311 01 11245677888999999977
Q ss_pred CCCcC--CCCCCCC------------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCcee
Q 005240 563 SIPII--GEGDKLP------------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC 628 (706)
Q Consensus 563 ~~~~~--g~g~~~~------------~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~ 628 (706)
.++.. +.+.... ..........|+.++++++.++..++ .+|+++|+|+||++++.++.++| ++
T Consensus 63 ~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~ 139 (236)
T 1zi8_A 63 LYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VD 139 (236)
T ss_dssp GGGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SS
T ss_pred ccccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--cc
Confidence 65332 1111111 01123456889999999998776555 69999999999999999999997 99
Q ss_pred EEEeccCCCCCCC--------CCcc---------c---hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc-------cHH
Q 005240 629 CGIARSGSYNKTL--------TPFG---------F---QAERFFDALKGHGALSRLVLLPFEHHVYAARE-------NVM 681 (706)
Q Consensus 629 a~v~~~~~~d~~~--------~~~~---------~---~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-------~~~ 681 (706)
++++.+|...... .|.. . ..+++++.+...+ +++++++|+++|.+.... ...
T Consensus 140 ~~v~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 218 (236)
T 1zi8_A 140 RAVGYYGVGLEKQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVHWYEEAGHSFARTGSSGYVASAAA 218 (236)
T ss_dssp EEEEESCSSGGGCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEEEETTCCTTTTCTTSTTCCHHHHH
T ss_pred EEEEecCcccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEEEECCCCcccccCCCCccCHHHHH
Confidence 9999888643211 1211 0 2237777776655 899999999999887432 235
Q ss_pred HHHHHHHHHHHHHhcc
Q 005240 682 HVIWETDRWLQKYCLS 697 (706)
Q Consensus 682 ~~~~~~~~f~~~~l~~ 697 (706)
+.++.+.+||+++++.
T Consensus 219 ~~~~~i~~fl~~~l~~ 234 (236)
T 1zi8_A 219 LANERTLDFLVPLQSR 234 (236)
T ss_dssp HHHHHHHHHHGGGCC-
T ss_pred HHHHHHHHHHHHhcCC
Confidence 7889999999999864
No 78
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.66 E-value=4.8e-14 Score=151.58 Aligned_cols=316 Identities=11% Similarity=0.052 Sum_probs=189.6
Q ss_pred CCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCC-ccccccccceEEecC
Q 005240 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-ICLNAVFGSFVWVNN 97 (706)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~-~~~~~~~~~~~wSpD 97 (706)
++.+.+..++.+.....++||| ++.++++.. ....|+++|+++++..+...... ..-...+..+.|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~---------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~ 180 (433)
T 3bws_A 111 ITHRFISRFKTGFQPKSVRFID-NTRLAIPLL---------EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH 180 (433)
T ss_dssp CSEEEEEEEECSSCBCCCEESS-SSEEEEEBT---------TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG
T ss_pred CcceEEEEEcCCCCceEEEEeC-CCeEEEEeC---------CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC
Confidence 5555555555555577899999 666666542 23569999999888776432110 000112567899999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc-eecCCC-
Q 005240 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP- 174 (706)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~-~~lt~~- 174 (706)
|+.++.... .+.|+++++ +++. ..+...
T Consensus 181 ~~~~~s~~~-------------------------------------------------d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 181 NELWVSQMQ-------------------------------------------------ANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp TEEEEEEGG-------------------------------------------------GTEEEEEETTTCCEEEEEECSS
T ss_pred CEEEEEECC-------------------------------------------------CCEEEEEECCCceEEEEEcCCC
Confidence 987665421 257888898 4443 334333
Q ss_pred ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCC
Q 005240 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (706)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~ 254 (706)
..+..++|+|||++|+++.... ..|++||+.+++........ ..+..+.|+|||+
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~------------~~i~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~~g~ 266 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWIS------------EDISVIDRKTKLEIRKTDKI-------------GLPRGLLLSKDGK 266 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTT------------TEEEEEETTTTEEEEECCCC-------------SEEEEEEECTTSS
T ss_pred CCeeEEEEcCCCCEEEEEecCC------------CcEEEEECCCCcEEEEecCC-------------CCceEEEEcCCCC
Confidence 5778999999999997765432 47999999876554433221 1234789999998
Q ss_pred ceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
. |+..... .+... ...+.|+++|+ .+++.............+.|+||++.+++.... ...|+++|+.++
T Consensus 267 ~-l~~~~~~-~~~~~---~~dg~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~---~~~v~v~d~~~~ 335 (433)
T 3bws_A 267 E-LYIAQFS-ASNQE---SGGGRLGIYSM---DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMC---CSKIEVYDLKEK 335 (433)
T ss_dssp E-EEEEEEE-SCTTC---SCCEEEEEEET---TTTEEEEEEEEEECEEEEEECSSTTEEEEEETT---TTEEEEEETTTT
T ss_pred E-EEEEECC-CCccc---cCCCeEEEEEC---CCCcEEeeccCCCCcceEEECCCCCEEEEEecC---CCEEEEEECCCC
Confidence 6 6544322 11110 12346889998 556555554445567789999999888776422 336888888874
Q ss_pred CCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCc-ceEEEEecCCCCCCCCCCceeeeecCCCceeeeecc
Q 005240 335 DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDE-QIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 413 (706)
Q Consensus 335 ~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (706)
+........ .....+.|+|||+++++.....+.. ..+++ .| .....|+.+|+.+++....+..
T Consensus 336 --~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~---~g----~~dg~v~~~d~~~~~~~~~~~~ 399 (433)
T 3bws_A 336 --KVQKSIPVF-------DKPNTIALSPDGKYLYVSCRGPNHPTEGYLK---KG----LVLGKVYVIDTTTDTVKEFWEA 399 (433)
T ss_dssp --EEEEEEECS-------SSEEEEEECTTSSEEEEEECCCCCTTTCTTS---CC----SSCCEEEEEETTTTEEEEEEEC
T ss_pred --cEEEEecCC-------CCCCeEEEcCCCCEEEEEecCCCcccccccc---cc----ccceEEEEEECCCCcEEEEecC
Confidence 233222211 1122477899999888775321000 00000 00 0112578889888876555443
Q ss_pred cchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECC
Q 005240 414 NREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 460 (706)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~ 460 (706)
.. ....+.|+|||+.|+.+.... ..|++|++.
T Consensus 400 ~~------------~~~~~~~s~dg~~l~~~~~~d---~~i~v~~~~ 431 (433)
T 3bws_A 400 GN------------QPTGLDVSPDNRYLVISDFLD---HQIRVYRRD 431 (433)
T ss_dssp SS------------SEEEEEECTTSCEEEEEETTT---TEEEEEEET
T ss_pred CC------------CCceEEEcCCCCEEEEEECCC---CeEEEEEec
Confidence 21 112468999998887654322 457777754
No 79
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.66 E-value=4.5e-15 Score=154.71 Aligned_cols=188 Identities=14% Similarity=0.088 Sum_probs=136.4
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeE
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (706)
..+..+.+++.+.+|..|+++++.|++ .++.|+||++||++.. ... + .....+++.||.
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~-----~~~~p~vv~~HG~g~~--------~~~---~-----~~~~~~~~~G~~ 136 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKT-----EGKHPALIRFHGYSSN--------SGD---W-----NDKLNYVAAGFT 136 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESC-----SSCEEEEEEECCTTCC--------SCC---S-----GGGHHHHTTTCE
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCC-----CCCcCEEEEECCCCCC--------CCC---h-----hhhhHHHhCCcE
Confidence 446788999999999999999999986 2358999999998532 111 1 122367789999
Q ss_pred EEEcCCCCcCCCCCC-------------------CCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHH
Q 005240 558 VLAGPSIPIIGEGDK-------------------LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 618 (706)
Q Consensus 558 v~~~~~~~~~g~g~~-------------------~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~ 618 (706)
|+..+.+|..+.+.. .....+....+.|+.++++++.....+|++||+|+|+|+||++++.
T Consensus 137 v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~ 216 (346)
T 3fcy_A 137 VVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLA 216 (346)
T ss_dssp EEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHH
T ss_pred EEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHH
Confidence 999777754332221 1112245567899999999999888889999999999999999999
Q ss_pred HHHhCCCceeEEEeccCCCCCCC-------C---------------Ccc-------------------------------
Q 005240 619 LLAHAPHLFCCGIARSGSYNKTL-------T---------------PFG------------------------------- 645 (706)
Q Consensus 619 ~~~~~p~~~~a~v~~~~~~d~~~-------~---------------~~~------------------------------- 645 (706)
++.++|+ ++++++.+|...... . +..
T Consensus 217 ~a~~~p~-v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G 295 (346)
T 3fcy_A 217 CAALEPR-VRKVVSEYPFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVG 295 (346)
T ss_dssp HHHHSTT-CCEEEEESCSSCCHHHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEE
T ss_pred HHHhCcc-ccEEEECCCcccCHHHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEee
Confidence 9999987 999999998753110 0 000
Q ss_pred -----chHHHHHHHH-HhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 005240 646 -----FQAERFFDAL-KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 693 (706)
Q Consensus 646 -----~~~~~~~~~l-~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~ 693 (706)
... ....++ .....+++++++|+++|.+. .+..+.+.+||++
T Consensus 296 ~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~ 343 (346)
T 3fcy_A 296 LMDQVCPP-STVFAAYNNIQSKKDIKVYPDYGHEPM-----RGFGDLAMQFMLE 343 (346)
T ss_dssp TTCSSSCH-HHHHHHHTTCCSSEEEEEETTCCSSCC-----TTHHHHHHHHHHT
T ss_pred CCCCcCCH-HHHHHHHHhcCCCcEEEEeCCCCCcCH-----HHHHHHHHHHHHH
Confidence 000 223333 33333799999999999987 3567889999987
No 80
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.65 E-value=4.8e-16 Score=157.15 Aligned_cols=194 Identities=12% Similarity=0.122 Sum_probs=130.0
Q ss_pred ceEEEEEEc-cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 481 QKEMIKYQR-KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 481 ~~~~~~~~~-~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
..+.+++.+ .+|.++...+|.|++++ .+++|+||++||++... ..|... ....+.+++.||+|+
T Consensus 21 ~~~~~~~~s~~~~~~~~~~v~~P~~~~---~~~~p~vv~lHG~~~~~--------~~~~~~----~~~~~~~~~~g~~vv 85 (283)
T 4b6g_A 21 SQQVWAHHAQTLQCEMKFAVYLPNNPE---NRPLGVIYWLSGLTCTE--------QNFITK----SGFQRYAAEHQVIVV 85 (283)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECCCTT---CCCEEEEEEECCTTCCS--------HHHHHH----SCTHHHHHHHTCEEE
T ss_pred cEEEEEEechhhCCceEEEEEeCCCCC---CCCCCEEEEEcCCCCCc--------cchhhc----ccHHHHHhhCCeEEE
Confidence 344555554 47899999999999875 23599999999975321 111100 013455667899999
Q ss_pred EcCC--CCcC---------CCCCCCCc----h------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHH
Q 005240 560 AGPS--IPII---------GEGDKLPN----D------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAH 618 (706)
Q Consensus 560 ~~~~--~~~~---------g~g~~~~~----~------~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~ 618 (706)
+++. +|.. |.|..+.. . .+.....+++.. ++.+. +.+++|++|+|+||||++|+.
T Consensus 86 ~~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~-~~~~~~~~l~G~S~GG~~a~~ 161 (283)
T 4b6g_A 86 APDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPR---LIEKH-FPTNGKRSIMGHSMGGHGALV 161 (283)
T ss_dssp EECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHH---HHHHH-SCEEEEEEEEEETHHHHHHHH
T ss_pred EeccccccccccccccccccCCCcccccCccCcccchhhHHHHHHHHHHH---HHHHh-CCCCCCeEEEEEChhHHHHHH
Confidence 8764 2221 22222111 0 112222334433 33333 225689999999999999999
Q ss_pred HHHhCCCceeEEEeccCCCCCCCC----------------------------------Ccc---------c-h---HHHH
Q 005240 619 LLAHAPHLFCCGIARSGSYNKTLT----------------------------------PFG---------F-Q---AERF 651 (706)
Q Consensus 619 ~~~~~p~~~~a~v~~~~~~d~~~~----------------------------------~~~---------~-~---~~~~ 651 (706)
++.++|++|+++++.+|.++.... |.. . . ..++
T Consensus 162 ~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~ 241 (283)
T 4b6g_A 162 LALRNQERYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDF 241 (283)
T ss_dssp HHHHHGGGCSCEEEESCCCCGGGSHHHHHHHHHHHCSCGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHH
T ss_pred HHHhCCccceeEEEECCccccccCcchhhhHHhhcCCchHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHH
Confidence 999999999999999997653210 110 0 1 4588
Q ss_pred HHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 652 FDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 652 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
+++|++.++++++.+|||++|.|. .+......+++|+.++|+
T Consensus 242 ~~~l~~~g~~~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 242 IETCRAANQPVDVRFHKGYDHSYY---FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHHHHHHTCCCEEEEETTCCSSHH---HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999874 245677889999998873
No 81
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.65 E-value=8.5e-15 Score=141.65 Aligned_cols=194 Identities=12% Similarity=0.063 Sum_probs=136.5
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
...+.+++++.+| .+.++++.|++-.++ +.|+||++||++... +.. .......++..|+++||.|+
T Consensus 8 ~~~~~~~~~~~~g-~~~~~~~~p~~~~~~---~~~~vv~~HG~~~~~--------~~~--~~~~~~~~~~~l~~~g~~v~ 73 (220)
T 2fuk_A 8 TESAALTLDGPVG-PLDVAVDLPEPDVAV---QPVTAIVCHPLSTEG--------GSM--HNKVVTMAARALRELGITVV 73 (220)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTTSCC---CSEEEEEECSCTTTT--------CST--TCHHHHHHHHHHHTTTCEEE
T ss_pred ccceEEEEeCCCC-eEEEEEEeCCCCCcc---ccCEEEEECCCCCcC--------Ccc--cchHHHHHHHHHHHCCCeEE
Confidence 4668899999888 999999999762111 269999999965311 000 00001235567888999999
Q ss_pred EcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCC
Q 005240 560 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 639 (706)
Q Consensus 560 ~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~ 639 (706)
.++.+ |+|.+............|+.++++++.++. +.++|+++|+|+||++++.++.+. +++++|+.+|..+.
T Consensus 74 ~~d~~---g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~ 146 (220)
T 2fuk_A 74 RFNFR---SVGTSAGSFDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGR 146 (220)
T ss_dssp EECCT---TSTTCCSCCCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTT
T ss_pred EEecC---CCCCCCCCcccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccc
Confidence 97765 444443332333567899999999998874 667999999999999999999888 89999999987653
Q ss_pred CC-------CCcc---------chHHHHHHHHHh-CCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhcc
Q 005240 640 TL-------TPFG---------FQAERFFDALKG-HGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 640 ~~-------~~~~---------~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~ 697 (706)
.. .|.. ... +..+++.+ .+.+++++++++++|.+.. ...++.+.+.+||+++|..
T Consensus 147 ~~~~~~~~~~p~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~--~~~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 147 WDFSDVQPPAQWLVIQGDADEIVDP-QAVYDWLETLEQQPTLVRMPDTSHFFHR--KLIDLRGALQHGVRRWLPA 218 (220)
T ss_dssp BCCTTCCCCSSEEEEEETTCSSSCH-HHHHHHHTTCSSCCEEEEETTCCTTCTT--CHHHHHHHHHHHHGGGCSS
T ss_pred hhhhhcccCCcEEEEECCCCcccCH-HHHHHHHHHhCcCCcEEEeCCCCceehh--hHHHHHHHHHHHHHHHhhc
Confidence 21 1211 111 22233333 2356899999999999875 3567889999999998864
No 82
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.65 E-value=3.1e-15 Score=156.69 Aligned_cols=197 Identities=13% Similarity=-0.001 Sum_probs=143.1
Q ss_pred CCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEE
Q 005240 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (706)
Q Consensus 479 ~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (706)
.+..+.+++.+.+|..+.+.+|.|.+. . .++|+||++|||++.. ++.... .....+..|++.||+|
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~--~--~~~p~vv~iHGgg~~~--------g~~~~~--~~~~~~~~la~~g~~v 144 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGV--E--GVLPGLVYTHGGGMTI--------LTTDNR--VHRRWCTDLAAAGSVV 144 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTC--C--SCEEEEEEECCSTTTS--------SCSSSH--HHHHHHHHHHHTTCEE
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCC--C--CCCeEEEEEcCCcccc--------CCCccc--chhHHHHHHHhCCCEE
Confidence 356678888888888999999999862 1 1489999999986532 111100 0113466788899999
Q ss_pred EEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEechHHHHHHHHHHh-----CCCceeEE
Q 005240 559 LAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAH-----APHLFCCG 630 (706)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~---~id~~~i~i~G~S~GG~~a~~~~~~-----~p~~~~a~ 630 (706)
+..++++..|.. ........+.|+..+++|+.+.. .+| +|+|+|+|+||++++.++.+ .|++|+++
T Consensus 145 v~~d~r~~gg~~----~~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~ 218 (361)
T 1jkm_A 145 VMVDFRNAWTAE----GHHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGV 218 (361)
T ss_dssp EEEECCCSEETT----EECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEE
T ss_pred EEEecCCCCCCC----CCCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceE
Confidence 998888654321 11112345789999999998752 244 99999999999999999998 77899999
Q ss_pred EeccCCCCCC----------------------------------------------CCCcc-------------------
Q 005240 631 IARSGSYNKT----------------------------------------------LTPFG------------------- 645 (706)
Q Consensus 631 v~~~~~~d~~----------------------------------------------~~~~~------------------- 645 (706)
|+.+|..+.. ..|..
T Consensus 219 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~P~Lii~G~~ 298 (361)
T 1jkm_A 219 YASIPYISGGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNEL 298 (361)
T ss_dssp EEESCCCCCCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETT
T ss_pred EEECCccccccccccccccccCcchhhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCCceEEEEcCc
Confidence 9999987650 00110
Q ss_pred --c--hHHHHHHHHHhCCCcEEEEEeCCCCccCC-Cc----ccH-HHHHHHHHHHHHHHh
Q 005240 646 --F--QAERFFDALKGHGALSRLVLLPFEHHVYA-AR----ENV-MHVIWETDRWLQKYC 695 (706)
Q Consensus 646 --~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~-~~----~~~-~~~~~~~~~f~~~~l 695 (706)
+ +..+++++|+..++++++++|||++|.+. .. ... .+..+.+.+||+++.
T Consensus 299 D~~~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 299 DPLRDEGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp CTTHHHHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 0 12288999999999999999999999876 21 233 678899999999874
No 83
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.64 E-value=7.1e-15 Score=140.94 Aligned_cols=186 Identities=15% Similarity=0.074 Sum_probs=126.9
Q ss_pred ceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEE
Q 005240 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (706)
Q Consensus 481 ~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 560 (706)
..|.+.+++.|| .++++++.|++ .++.|+||++||++... .. ........++..|+++||.|+.
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~--------~~--~~~~~~~~~~~~l~~~g~~v~~ 68 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG-----IEKSVTGIICHPHPLHG--------GT--MNNKVVTTLAKALDELGLKTVR 68 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS-----CCCSEEEEEECSCGGGT--------CC--TTCHHHHHHHHHHHHTTCEEEE
T ss_pred ccceEEEECCCc-eEEEEEEcCCC-----CCCCCEEEEEcCCCCCC--------Cc--cCCchHHHHHHHHHHCCCEEEE
Confidence 456788999999 99999999875 12469999999964211 00 0000012456778889999999
Q ss_pred cCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCC
Q 005240 561 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT 640 (706)
Q Consensus 561 ~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~ 640 (706)
++.+ |+|.+...........+|+.++++++.++ .+.++|+++|+|+||.+++.++ ++| +++++++.+|..+..
T Consensus 69 ~d~~---g~g~s~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~ 141 (208)
T 3trd_A 69 FNFR---GVGKSQGRYDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE 141 (208)
T ss_dssp ECCT---TSTTCCSCCCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG
T ss_pred EecC---CCCCCCCCccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC
Confidence 7775 44444333223345688999999999887 4458999999999999999999 776 899999999876522
Q ss_pred C--------CCcc---------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 005240 641 L--------TPFG---------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 691 (706)
Q Consensus 641 ~--------~~~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~ 691 (706)
. .|.. ...+...+.++..+..++++++++++|.+... ..++.+.+.+||
T Consensus 142 ~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~i~~fl 207 (208)
T 3trd_A 142 GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHFFHGR--LIELRELLVRNL 207 (208)
T ss_dssp GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSCCEEEEETTCCSSCTTC--HHHHHHHHHHHH
T ss_pred CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCceEEEEeCCCCCccccc--HHHHHHHHHHHh
Confidence 1 1211 11223333333444448999999999998743 356666666665
No 84
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.64 E-value=1.6e-14 Score=148.18 Aligned_cols=193 Identities=15% Similarity=0.094 Sum_probs=134.9
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeE
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (706)
..++.+.+++.+.+|..|+++++.|++ .++.|+||++||++.. .. ..+.....|++.||.
T Consensus 52 ~~~~~~~~~~~~~~g~~i~~~~~~P~~-----~~~~p~vv~~HG~~~~-------~~--------~~~~~~~~l~~~g~~ 111 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGNARITGWYAVPDK-----EGPHPAIVKYHGYNAS-------YD--------GEIHEMVNWALHGYA 111 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESS-----CSCEEEEEEECCTTCC-------SG--------GGHHHHHHHHHTTCE
T ss_pred CCeEEEEEEEEccCCCEEEEEEEeeCC-----CCCccEEEEEcCCCCC-------CC--------CCcccccchhhCCcE
Confidence 345778899998899999999999976 2348999999997421 00 012234467889999
Q ss_pred EEEcCCCCcCCCCCCC-----------------CchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHH
Q 005240 558 VLAGPSIPIIGEGDKL-----------------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLL 620 (706)
Q Consensus 558 v~~~~~~~~~g~g~~~-----------------~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~ 620 (706)
|+.+++++........ ....+....+.|+.++++|+.++..+|+++|+++|+|+||.+++.++
T Consensus 112 v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a 191 (318)
T 1l7a_A 112 TFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAA 191 (318)
T ss_dssp EEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHH
T ss_pred EEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHh
Confidence 9998876543322111 00112456789999999999998778999999999999999999999
Q ss_pred HhCCCceeEEEeccCCCCCC-----------C------------------------------------CCcc--------
Q 005240 621 AHAPHLFCCGIARSGSYNKT-----------L------------------------------------TPFG-------- 645 (706)
Q Consensus 621 ~~~p~~~~a~v~~~~~~d~~-----------~------------------------------------~~~~-------- 645 (706)
.++|+ ++++++.+|..... . .|..
T Consensus 192 ~~~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~ 270 (318)
T 1l7a_A 192 ALSDI-PKAAVADYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDK 270 (318)
T ss_dssp HHCSC-CSEEEEESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCS
T ss_pred ccCCC-ccEEEecCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCC
Confidence 99975 67777777754310 0 0000
Q ss_pred -chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 646 -FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 646 -~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
...+...+..+....++++++||+++|... .+..+.+.+||+++|+
T Consensus 271 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 271 VTPPSTVFAAYNHLETKKELKVYRYFGHEYI-----PAFQTEKLAFFKQILK 317 (318)
T ss_dssp SSCHHHHHHHHHHCCSSEEEEEETTCCSSCC-----HHHHHHHHHHHHHHHC
T ss_pred CCCcccHHHHHhhcCCCeeEEEccCCCCCCc-----chhHHHHHHHHHHHhC
Confidence 000122223333444689999999999832 3678999999999885
No 85
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.64 E-value=2e-13 Score=140.94 Aligned_cols=281 Identities=14% Similarity=0.099 Sum_probs=173.8
Q ss_pred CCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCcee-ecccCCCccccccccceEEecCCcEEEEEec
Q 005240 28 PDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIP 106 (706)
Q Consensus 28 ~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~ 106 (706)
.....+..+.|||||+.|+... ...|.++++++++.. .+...........+..+.|+|||+.|+....
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 117 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-----------KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-----------BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES
T ss_pred cCCCceEEEEEecCCcEEEEcC-----------CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC
Confidence 3445688999999999998853 357778888765422 2211000001123778999999998887642
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC-CCc---eecCCC-ceEeeee
Q 005240 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GTA---KDFGTP-AVYTAVE 181 (706)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~-g~~---~~lt~~-~~~~~~~ 181 (706)
.+.|.++++. ++. ..+... ..+..++
T Consensus 118 -------------------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~ 148 (337)
T 1gxr_A 118 -------------------------------------------------ASTLSIWDLAAPTPRIKAELTSSAPACYALA 148 (337)
T ss_dssp -------------------------------------------------SSEEEEEECCCC--EEEEEEECSSSCEEEEE
T ss_pred -------------------------------------------------CCcEEEEECCCCCcceeeecccCCCceEEEE
Confidence 1577888884 342 223333 5678999
Q ss_pred eCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEE
Q 005240 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (706)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~ 261 (706)
|+|||+.|+..... ..|.+|++.+++......... ..+..+.|+||++. |+...
T Consensus 149 ~~~~~~~l~~~~~d-------------g~v~~~d~~~~~~~~~~~~~~------------~~i~~~~~~~~~~~-l~~~~ 202 (337)
T 1gxr_A 149 ISPDSKVCFSCCSD-------------GNIAVWDLHNQTLVRQFQGHT------------DGASCIDISNDGTK-LWTGG 202 (337)
T ss_dssp ECTTSSEEEEEETT-------------SCEEEEETTTTEEEEEECCCS------------SCEEEEEECTTSSE-EEEEE
T ss_pred ECCCCCEEEEEeCC-------------CcEEEEeCCCCceeeeeeccc------------CceEEEEECCCCCE-EEEEe
Confidence 99999999876543 379999998765443322211 12447899999986 55332
Q ss_pred eccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceee
Q 005240 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (706)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 341 (706)
. .+.|+++|+ .+++..........+..+.|+||++.|++... ...|+++|+.++ +...+
T Consensus 203 -~-----------dg~i~~~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----~~~i~~~~~~~~--~~~~~ 261 (337)
T 1gxr_A 203 -L-----------DNTVRSWDL---REGRQLQQHDFTSQIFSLGYCPTGEWLAVGME----SSNVEVLHVNKP--DKYQL 261 (337)
T ss_dssp -T-----------TSEEEEEET---TTTEEEEEEECSSCEEEEEECTTSSEEEEEET----TSCEEEEETTSS--CEEEE
T ss_pred -c-----------CCcEEEEEC---CCCceEeeecCCCceEEEEECCCCCEEEEEcC----CCcEEEEECCCC--CeEEE
Confidence 1 135888888 55555444556677888999999999887652 224777787774 22332
Q ss_pred ecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhh
Q 005240 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 421 (706)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 421 (706)
.... . ....+.|+|||++|+..... ..+..+++.+++........
T Consensus 262 ~~~~-~------~v~~~~~~~~~~~l~~~~~d---------------------g~i~~~~~~~~~~~~~~~~~------- 306 (337)
T 1gxr_A 262 HLHE-S------CVLSLKFAYCGKWFVSTGKD---------------------NLLNAWRTPYGASIFQSKES------- 306 (337)
T ss_dssp CCCS-S------CEEEEEECTTSSEEEEEETT---------------------SEEEEEETTTCCEEEEEECS-------
T ss_pred cCCc-c------ceeEEEECCCCCEEEEecCC---------------------CcEEEEECCCCeEEEEecCC-------
Confidence 1110 1 12247789999988765421 13556777776654332211
Q ss_pred hhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEEC
Q 005240 422 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 459 (706)
Q Consensus 422 ~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~ 459 (706)
.......|+||++.|+....+. .|++|++
T Consensus 307 -----~~v~~~~~s~~~~~l~~~~~dg----~i~iw~~ 335 (337)
T 1gxr_A 307 -----SSVLSCDISVDDKYIVTGSGDK----KATVYEV 335 (337)
T ss_dssp -----SCEEEEEECTTSCEEEEEETTS----CEEEEEE
T ss_pred -----CcEEEEEECCCCCEEEEecCCC----eEEEEEE
Confidence 1122468999998777655443 3666663
No 86
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.63 E-value=5.1e-14 Score=147.34 Aligned_cols=289 Identities=13% Similarity=0.099 Sum_probs=160.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..++|||||++||-.+.. ...--...|++++..++................+..++|+||++.|+.. .
T Consensus 44 ~V~~v~fSpDG~~las~s~d----~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s-~----- 113 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSL----SSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS-D----- 113 (357)
T ss_dssp EEEEEEECSSSCEEEEEECS----SSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-T-----
T ss_pred CEEEEEECCCCCEEEEEcCC----CCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-C-----
Confidence 57889999999999887641 1111135788888776654321110000011237789999999865532 1
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCcee---c--CCC-ceEeeeeeCC
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKD---F--GTP-AVYTAVEPSP 184 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~---l--t~~-~~~~~~~~Sp 184 (706)
.+.|.++|+ +++... + ... ..+..++|+|
T Consensus 114 --------------------------------------------dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp 149 (357)
T 4g56_B 114 --------------------------------------------SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS 149 (357)
T ss_dssp --------------------------------------------TSCEEEC--------CCCCEEECCCSSCEEEEEECS
T ss_pred --------------------------------------------CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC
Confidence 135666676 442211 1 122 5788999999
Q ss_pred CCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEecc
Q 005240 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD 264 (706)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~ 264 (706)
||++|+..+.. ..|.+||+.+++......... ..+..++|+|++...++ ....+
T Consensus 150 dg~~l~sgs~d-------------g~v~iwd~~~~~~~~~~~~h~------------~~v~~v~~s~~~~~~~~-s~~~d 203 (357)
T 4g56_B 150 DGTQAVSGGKD-------------FSVKVWDLSQKAVLKSYNAHS------------SEVNCVAACPGKDTIFL-SCGED 203 (357)
T ss_dssp SSSEEEEEETT-------------SCEEEEETTTTEEEEEECCCS------------SCEEEEEECTTCSSCEE-EEETT
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCCC------------CCEEEEEEccCCCceee-eeccC
Confidence 99999765543 379999998765443322211 12447899999976233 32211
Q ss_pred CCCCccccCccceeeeecCCCCCCCCceE-Ee--ecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceee
Q 005240 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEI-LH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (706)
Q Consensus 265 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~-l~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 341 (706)
..|.+||+ .+++... +. .....+..+.|+|++..++...... ..|.++|+.++ +....
T Consensus 204 -----------g~v~~wd~---~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d---~~i~~wd~~~~--~~~~~ 264 (357)
T 4g56_B 204 -----------GRILLWDT---RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET---GNVSLVNIKNP--DSAQT 264 (357)
T ss_dssp -----------SCEEECCT---TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS---SCEEEEESSCG--GGCEE
T ss_pred -----------CceEEEEC---CCCceeeeeeeccccccccchhhhhcccceEEEeecc---cceeEEECCCC--cEeEE
Confidence 24778888 4444332 22 2345577889999965544332222 24667777764 22222
Q ss_pred ecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhh
Q 005240 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 421 (706)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 421 (706)
+...... ...+.|+|+|+.++++... + ..+..+|+.+++..+...-.
T Consensus 265 ~~~~~~~------v~~l~~sp~~~~~lasgs~------------D--------~~i~iwd~~~~~~~~~~~H~------- 311 (357)
T 4g56_B 265 SAVHSQN------ITGLAYSYHSSPFLASISE------------D--------CTVAVLDADFSEVFRDLSHR------- 311 (357)
T ss_dssp ECCCSSC------EEEEEECSSSSCCEEEEET------------T--------SCEEEECTTSCEEEEECCCS-------
T ss_pred Eecccee------EEEEEEcCCCCCEEEEEeC------------C--------CEEEEEECCCCcEeEECCCC-------
Confidence 2221111 2247789998655444321 1 13666788777654443211
Q ss_pred hhhhccCCCceeccc-CCCEEEEEEecCCCCcEEEEEECCC
Q 005240 422 AVALVFGQGEEDINL-NQLKILTSKESKTEITQYHILSWPL 461 (706)
Q Consensus 422 ~~~~~~~~~~~~~s~-Dg~~l~~~~~~~~~p~~v~~~~~~~ 461 (706)
.....++||| |++.|+....+. .|++|++.+
T Consensus 312 -----~~V~~vafsP~d~~~l~s~s~Dg----~v~iW~~~~ 343 (357)
T 4g56_B 312 -----DFVTGVAWSPLDHSKFTTVGWDH----KVLHHHLPS 343 (357)
T ss_dssp -----SCEEEEEECSSSTTEEEEEETTS----CEEEEECC-
T ss_pred -----CCEEEEEEeCCCCCEEEEEcCCC----eEEEEECCC
Confidence 1223578998 777666554444 388998754
No 87
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.63 E-value=1.6e-13 Score=153.36 Aligned_cols=274 Identities=12% Similarity=0.147 Sum_probs=172.8
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..+.|+|||+.|+.... + ..|.+++..+...+.+..+.. .+..++|+|||+.|+..+.+
T Consensus 264 ~v~~v~~~~d~~~l~~~~~--------d--~~i~~w~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~t~~~d---- 324 (577)
T 2ymu_A 264 SVNGVAFRPDGQTIASASD--------D--KTVKLWNRNGQLLQTLTGHSS-----SVWGVAFSPDGQTIASASDD---- 324 (577)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCEEEEETTSCEEEEECCCSS-----CEEEEEECTTSSEEEEEETT----
T ss_pred CEEEEEEcCCCCEEEEEeC--------C--CEEEEEeCCCcEEEEEecCCC-----CeEEEEECCCCCEEEEEeCC----
Confidence 5788999999999987643 2 456677776655555543322 26788999999998876421
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecCCC-ceEeeeeeCCCCcEE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQKYV 189 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt~~-~~~~~~~~SpDG~~i 189 (706)
+.|.++++++ ....+... ..+..++|+|||++|
T Consensus 325 ---------------------------------------------~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 325 ---------------------------------------------KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp ---------------------------------------------SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred ---------------------------------------------CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEE
Confidence 3566667766 45555544 677889999999999
Q ss_pred EEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCc
Q 005240 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (706)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~ 269 (706)
+..... ..+.+|+..+.....+.... ..+..++|+|||+. |+... .
T Consensus 360 ~~~~~d-------------g~v~~~~~~~~~~~~~~~~~-------------~~v~~~~~s~dg~~-l~~~~-~------ 405 (577)
T 2ymu_A 360 ASASDD-------------KTVKLWNRNGQLLQTLTGHS-------------SSVRGVAFSPDGQT-IASAS-D------ 405 (577)
T ss_dssp EEEETT-------------SEEEEEETTCCEEEEEECCS-------------SCEEEEEECTTSSC-EEEEE-T------
T ss_pred EEEeCC-------------CEEEEEcCCCCEEEEecCCC-------------CCeEEEEECCCCCE-EEEEe-C------
Confidence 866543 37889998877766665432 12457899999997 65332 1
Q ss_pred cccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCccccc
Q 005240 270 VEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENV 349 (706)
Q Consensus 270 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~ 349 (706)
...|.++|. .+...+.+......+..+.|+||++.|+..+.+ + .|.++|+++. ....+.. .-.
T Consensus 406 -----d~~v~~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~--~v~~w~~~~~--~~~~~~~-~~~-- 468 (577)
T 2ymu_A 406 -----DKTVKLWNR---NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDD--K--TVKLWNRNGQ--LLQTLTG-HSS-- 468 (577)
T ss_dssp -----TSEEEEECT---TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT--S--EEEEEETTSC--EEEEEEC-CSS--
T ss_pred -----CCEEEEEeC---CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCC--C--EEEEEECCCC--EEEEEcC-CCC--
Confidence 124778887 454455666677788899999999998876522 2 3555666541 2222211 111
Q ss_pred ccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCC
Q 005240 350 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 429 (706)
Q Consensus 350 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~ 429 (706)
....+.|+|||++|+.... ++ .+..+|. +|+..+.+.... ...
T Consensus 469 ----~v~~~~~spd~~~las~~~----d~-----------------~i~iw~~-~~~~~~~~~~h~-----------~~v 511 (577)
T 2ymu_A 469 ----SVRGVAFSPDGQTIASASD----DK-----------------TVKLWNR-NGQLLQTLTGHS-----------SSV 511 (577)
T ss_dssp ----CEEEEEECTTSCEEEEEET----TS-----------------EEEEEET-TSCEEEEEECCS-----------SCE
T ss_pred ----CEEEEEEcCCCCEEEEEeC----CC-----------------EEEEEcC-CCCEEEEEeCCC-----------CCE
Confidence 1123678999999876542 11 2444454 343322222211 112
Q ss_pred CceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 005240 430 GEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (706)
Q Consensus 430 ~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~ 461 (706)
..+.|||||+.|+....+ ..|++||..+
T Consensus 512 ~~l~~s~dg~~l~s~~~d----g~v~lwd~~~ 539 (577)
T 2ymu_A 512 RGVAFSPDGQTIASASDD----KTVKLWNRNG 539 (577)
T ss_dssp EEEEECTTSSCEEEEETT----SEEEEECTTS
T ss_pred EEEEEcCCCCEEEEEECc----CEEEEEeCCC
Confidence 346899999877755433 3588998543
No 88
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.63 E-value=6.3e-14 Score=141.46 Aligned_cols=238 Identities=9% Similarity=0.039 Sum_probs=164.8
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeecccccccc----CCceeEEEEEcCCCceeecccCC
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVS----SCKLRVWIADAETGEAKPLFESP 81 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~----~~~~~l~~~d~~~g~~~~lt~~~ 81 (706)
.||-.+++. ...++|+. ...--++|||++|+|+...++..... .....||.+++++++.++|+...
T Consensus 38 ~ly~~~~dg----~~~~~l~~------~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~ 107 (302)
T 3s25_A 38 RLYAMNIDG----SNIHKLSN------DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP 107 (302)
T ss_dssp EEEEEETTS----CSCEEEEE------EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC
T ss_pred eEEEEcCCC----CCCEEccC------CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC
Confidence 466666644 67777762 22346799999999998643211000 02578999999999988887443
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 82 ~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
. ..|+++|++|+|..... . ....||+
T Consensus 108 ~---------~~~s~~g~~Iy~~~~~~-~--------------------------------------------~~~~Iy~ 133 (302)
T 3s25_A 108 C---------IYASLIGNYIYYLHYDT-Q--------------------------------------------TATSLYR 133 (302)
T ss_dssp E---------EEEEEETTEEEEEEESS-S--------------------------------------------SCEEEEE
T ss_pred c---------cEEEEeCCEEEEEeecC-C--------------------------------------------CCceEEE
Confidence 2 27999999999974100 0 2268999
Q ss_pred EccCC-CceecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCcc
Q 005240 162 GSLDG-TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (706)
Q Consensus 162 ~~l~g-~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~ 240 (706)
++++| +.++|+.... ..++|+|++|+|++.. ..+|++.+++|+..++|.....
T Consensus 134 ~~~dGs~~~~lt~~~~---~~~~~~g~~iy~t~~g------------~~~Iy~~~l~g~~~~~l~~~~~----------- 187 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYL---FTCNTSDRYFYYNNPK------------NGQLYRYDTASQSEALFYDCNC----------- 187 (302)
T ss_dssp EETTSCCCEEEESSCC---CCSEEETTEEEEECTT------------TCCEEEEETTTTEEEEEECSCE-----------
T ss_pred EECCCCCeEEEeCCCc---eEeeEECCEEEEEeCC------------CceEEEEECCCCCEEEEeCCCc-----------
Confidence 99988 7788887632 5679999999999763 2489999999998888754321
Q ss_pred CCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeecc
Q 005240 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK 320 (706)
Q Consensus 241 ~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~ 320 (706)
...++|+++. |||+...++ ..|+++++ +|+..+.|+.... +.|+|++.+|+|.....
T Consensus 188 -----~~~~~P~g~~-iy~t~~~~~----------~~I~~~~l---dG~~~~~Lt~~~~----~~~~~~g~~Iy~~~~~~ 244 (302)
T 3s25_A 188 -----YKPVVLDDTN-VYYMDVNRD----------NAIVHVNI---NNPNPVVLTEANI----EHYNVYGSLIFYQRGGD 244 (302)
T ss_dssp -----EEEEEEETTE-EEEEEGGGT----------TEEEEECS---SSCCCEECSCSCE----EEEEEETTEEEEEECSS
T ss_pred -----cceeeecCCE-EEEEEcCCC----------cEEEEEEC---CCCCeEEEeCCCc----ceEEECCCEEEEEECCC
Confidence 1235699998 888743211 25899998 7888888875432 56999999999875332
Q ss_pred ccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 321 TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 321 ~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
...|+++++++. ..+.|.+..+ ...++.+.+|+|+.
T Consensus 245 --~~~i~~~~~DG~--~r~~l~~~~~-----------~~i~i~~d~Iy~td 280 (302)
T 3s25_A 245 --NPALCVVKNDGT--GFKELAKGEF-----------CNINVTSQYVYFTD 280 (302)
T ss_dssp --SCEEEEEETTSC--CCEEEEESCE-----------EEEEECSSEEEEEE
T ss_pred --CcEEEEEECCCC--ccEEeeCCcc-----------ceEEEeCCEEEEEE
Confidence 368999999994 3455543321 23467888888875
No 89
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.2e-13 Score=144.44 Aligned_cols=309 Identities=9% Similarity=0.013 Sum_probs=181.3
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..++|||||++|+.... ...|.++++.+++.......... .+..+.|+|||++|+..+.
T Consensus 34 ~v~~~~~s~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~~~----- 94 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSK----------DSSASVWYSLNGERLGTLDGHTG----TIWSIDVDCFTKYCVTGSA----- 94 (369)
T ss_dssp CEEEEEECTTSCEEEEEES----------SSCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSEEEEEET-----
T ss_pred eEEEEEEcCCCCEEEEEeC----------CCEEEEEeCCCchhhhhhhhcCC----cEEEEEEcCCCCEEEEEeC-----
Confidence 5889999999999988642 24678888888776554322211 2778999999999887642
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc-eecCCCceEeeeeeCCCCcEE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYTAVEPSPDQKYV 189 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~-~~lt~~~~~~~~~~SpDG~~i 189 (706)
.+.|.++++ +++. ..+.....+..+.|+|+|+.|
T Consensus 95 --------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l 130 (369)
T 3zwl_B 95 --------------------------------------------DYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYF 130 (369)
T ss_dssp --------------------------------------------TTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEE
T ss_pred --------------------------------------------CCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEE
Confidence 157888888 5543 333333678899999999999
Q ss_pred EEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCC
Q 005240 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (706)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~ 268 (706)
+........ ....|.+|++..... ..+......................+.|+|+++. |+... .
T Consensus 131 ~~~~~~~~~--------~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~-~----- 195 (369)
T 3zwl_B 131 LAILDNVMK--------NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY-IIAGH-K----- 195 (369)
T ss_dssp EEEECCBTT--------BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE-EEEEE-T-----
T ss_pred EEecCCccC--------CCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE-EEEEc-C-----
Confidence 877654110 024788888873321 1111000000000000000012447899999986 54331 1
Q ss_pred ccccCccceeeeecCCCCCC-CCc-eEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcc
Q 005240 269 NVEVSPRDIIYTQPAEPAEG-EKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 346 (706)
Q Consensus 269 ~~~~~~~~~l~~~d~~~~~~-~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 346 (706)
.+.|+++|+ .. ++. ..+......+..+.|+||+..|+..+. ...|.++|+.++ +....+...
T Consensus 196 ------dg~i~i~d~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~--~~~~~~~~~- 259 (369)
T 3zwl_B 196 ------DGKISKYDV---SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR----DTNSFLVDVSTL--QVLKKYETD- 259 (369)
T ss_dssp ------TSEEEEEET---TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTC--CEEEEEECS-
T ss_pred ------CCEEEEEEC---CCCcEeEEEEecCCCceeEEEECCCCCEEEEecC----CceEEEEECCCC--ceeeeecCC-
Confidence 125888888 33 232 334455778889999999998887652 235788888874 233332211
Q ss_pred cccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhc
Q 005240 347 ENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALV 426 (706)
Q Consensus 347 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 426 (706)
.....+.|+|+|++++..... ++..++..... .....+..+|..+++.........
T Consensus 260 ------~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~----~~~~~i~~~d~~~~~~~~~~~~~~----------- 315 (369)
T 3zwl_B 260 ------CPLNTAVITPLKEFIILGGGQ---EAKDVTTTSAN----EGKFEARFYHKIFEEEIGRVQGHF----------- 315 (369)
T ss_dssp ------SCEEEEEECSSSSEEEEEECC---C-----------------CEEEEEETTTCCEEEEEECCS-----------
T ss_pred ------CCceeEEecCCCceEEEeecC---CCceEEEEecC----CCcceeEEEecCCCcchhheeccc-----------
Confidence 112246789999999887632 12222221111 122356777887776544433221
Q ss_pred cCCCceecccCCCEEEEEEecCCCCcEEEEEECCCC
Q 005240 427 FGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (706)
Q Consensus 427 ~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~ 462 (706)
.......|+||++.|+....+ ..|.+|++.++
T Consensus 316 ~~v~~~~~s~~~~~l~s~~~d----g~v~iw~~~~~ 347 (369)
T 3zwl_B 316 GPLNTVAISPQGTSYASGGED----GFIRLHHFEKS 347 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETT----SEEEEEEECHH
T ss_pred CcEEEEEECCCCCEEEEEcCC----CeEEEEECccc
Confidence 122357899999877765433 35889987654
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.63 E-value=1e-13 Score=143.55 Aligned_cols=286 Identities=13% Similarity=0.078 Sum_probs=161.4
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
..|++.+++. .|+.+.+..++....+..++|||||++|+++... ++...+|.++.++++.+.+......
T Consensus 15 ~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~~- 83 (343)
T 1ri6_A 15 QQIHVWNLNH---EGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP-------EFRVLAYRIAPDDGALTFAAESALP- 83 (343)
T ss_dssp TEEEEEEECT---TSCEEEEEEEECSSCCCCEEECTTSSEEEEEETT-------TTEEEEEEECTTTCCEEEEEEEECS-
T ss_pred CeEEEEEECC---CCcEEEeeeEecCCCCceEEECCCCCEEEEeecC-------CCeEEEEEecCCCCceeeccccccC-
Confidence 4688888864 2554555444455568889999999999876531 2334444444447776655332211
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
..+..++|+|||++|++.... .+.|+++++
T Consensus 84 --~~~~~~~~s~dg~~l~~~~~~------------------------------------------------~~~i~~~d~ 113 (343)
T 1ri6_A 84 --GSLTHISTDHQGQFVFVGSYN------------------------------------------------AGNVSVTRL 113 (343)
T ss_dssp --SCCSEEEECTTSSEEEEEETT------------------------------------------------TTEEEEEEE
T ss_pred --CCCcEEEEcCCCCEEEEEecC------------------------------------------------CCeEEEEEC
Confidence 126788999999988876421 145666666
Q ss_pred -CCC---cee-cCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC-CeeEEcc--cCCCCCCCCcc
Q 005240 165 -DGT---AKD-FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVRELC--DLPPAEDIPVC 236 (706)
Q Consensus 165 -~g~---~~~-lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~--~~~~~~~~p~~ 236 (706)
+|. ... +.....+..++|+|||++|++..... ..|.+|++.. ++...+. .......
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~~~~~~~~---- 177 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ------------DRICLFTVSDDGHLVAQDPAEVTTVEG---- 177 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG------------TEEEEEEECTTSCEEEEEEEEEECSTT----
T ss_pred CCCccccccccccCCCCceEEEECCCCCEEEEecCCC------------CEEEEEEecCCCceeeecccccccCCC----
Confidence 441 222 22224567899999999997765332 4799999986 5544322 1111000
Q ss_pred cCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec---c------cccccceec
Q 005240 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL---D------LRFRSVSWC 307 (706)
Q Consensus 237 ~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~------~~~~~~~ws 307 (706)
.++..+.|+|||+. |++.... .+.+.+++++. .+++.+.+... . .....+.|+
T Consensus 178 -----~~~~~~~~~pdg~~-l~~~~~~-----------~~~i~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 178 -----AGPRHMVFHPNEQY-AYCVNEL-----------NSSVDVWELKD-PHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp -----CCEEEEEECTTSSE-EEEEETT-----------TTEEEEEESSC-TTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred -----CCcceEEECCCCCE-EEEEeCC-----------CCEEEEEEecC-CCCcEEEEeeccccCccccccCCccceEEC
Confidence 12446899999986 6544211 12466777621 23444332211 1 122358999
Q ss_pred CCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCC
Q 005240 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG 387 (706)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g 387 (706)
|||+.|++.. ..++...+|.++.+++ +...+...... .....+.|+|||++|++....
T Consensus 240 ~dg~~l~v~~-~~~~~i~v~d~~~~~~--~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~-------------- 297 (343)
T 1ri6_A 240 PDGRHLYACD-RTASLITVFSVSEDGS--VLSKEGFQPTE-----TQPRGFNVDHSGKYLIAAGQK-------------- 297 (343)
T ss_dssp TTSSEEEEEE-TTTTEEEEEEECTTSC--CEEEEEEEECS-----SSCCCEEECTTSSEEEEECTT--------------
T ss_pred CCCCEEEEEe-cCCCEEEEEEEcCCCC--ceEEeeeecCC-----CccceEEECCCCCEEEEecCC--------------
Confidence 9999887654 2223334444443342 22332111100 012247889999988876521
Q ss_pred CCCCCCCCceeeeecCCCceeeee
Q 005240 388 FTPEGNIPFLDLFDINTGSKERIW 411 (706)
Q Consensus 388 ~~~~~~~~~l~~~d~~~g~~~~l~ 411 (706)
.....+|.+|.++|+.+.+.
T Consensus 298 ----~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 298 ----SHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp ----TCEEEEEEEETTTTEEEEEE
T ss_pred ----CCeEEEEEEcCCCceeeEcc
Confidence 12234666788788765553
No 91
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.63 E-value=7.4e-14 Score=157.35 Aligned_cols=231 Identities=12% Similarity=0.051 Sum_probs=139.9
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceee-cccCCCccccccccceEEecCCcEEEEEecCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~ 110 (706)
....+.|||||++||+.. . ..+.++++++++... +..+.. .+..++|||||++|+..+.+
T Consensus 20 ~~~~~~~spdg~~l~~~~---------~--~~v~l~~~~~~~~~~~~~~h~~-----~v~~~~~spdg~~lasg~~d--- 80 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCN---------G--TSVYTVPVGSLTDTEIYTEHSH-----QTTVAKTSPSGYYCASGDVH--- 80 (611)
T ss_dssp CCCCCEECTTSSEEEEEE---------T--TEEEEEETTCSSCCEEECCCSS-----CEEEEEECTTSSEEEEEETT---
T ss_pred ceeEEeeCCCCCEEEeCC---------C--CEEEEecCCCcccCeEecCCCC-----ceEEEEECCCCcEEEEEeCC---
Confidence 466788999999999964 2 478888987655443 433332 27789999999999876421
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc---eecCCC-ceEeeeeeCCC
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTP-AVYTAVEPSPD 185 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~---~~lt~~-~~~~~~~~SpD 185 (706)
+.|.++|+ +++. ..+... ..+..++||||
T Consensus 81 ----------------------------------------------~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~d 114 (611)
T 1nr0_A 81 ----------------------------------------------GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE 114 (611)
T ss_dssp ----------------------------------------------SEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT
T ss_pred ----------------------------------------------CCEEEeECCCCcceeeEeecccCCceEEEEECCC
Confidence 46777787 4422 123223 67889999999
Q ss_pred CcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccC
Q 005240 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (706)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~ 265 (706)
|++|+........ ...+++|+.. .....+..+. ..+..+.|+|+++..|+-. ..+
T Consensus 115 g~~l~~~~~~~~~---------~~~v~~wd~~-~~~~~l~gh~-------------~~v~~v~f~p~~~~~l~s~-s~D- 169 (611)
T 1nr0_A 115 SKRIAAVGEGRER---------FGHVFLFDTG-TSNGNLTGQA-------------RAMNSVDFKPSRPFRIISG-SDD- 169 (611)
T ss_dssp SCEEEEEECCSSC---------SEEEEETTTC-CBCBCCCCCS-------------SCEEEEEECSSSSCEEEEE-ETT-
T ss_pred CCEEEEEECCCCc---------eeEEEEeeCC-CCcceecCCC-------------CCceEEEECCCCCeEEEEE-eCC-
Confidence 9999876643211 1367788743 2222222211 2245789999997524322 111
Q ss_pred CCCccccCccceeeeecCCCCCCCCc-eEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeee-c
Q 005240 266 GDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF-D 343 (706)
Q Consensus 266 ~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~-~ 343 (706)
..+.+||. ..++. ..+..+...+..++|+|||+.|+..+.+ +. |.++|+.++ +....+ .
T Consensus 170 ----------~~v~lwd~---~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D--~~--i~lwd~~~g--~~~~~~~~ 230 (611)
T 1nr0_A 170 ----------NTVAIFEG---PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD--GT--IVLYNGVDG--TKTGVFED 230 (611)
T ss_dssp ----------SCEEEEET---TTBEEEEEECCCSSCEEEEEECTTSSEEEEEETT--SC--EEEEETTTC--CEEEECBC
T ss_pred ----------CeEEEEEC---CCCeEeeeeccccCceEEEEECCCCCEEEEEECC--Cc--EEEEECCCC--cEeeeecc
Confidence 24777777 33332 3345567788899999999988876532 33 555666553 222222 1
Q ss_pred CcccccccCCCCCceEeccCCCEEEEee
Q 005240 344 RVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 344 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
.......+......+.|+|||++|+...
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred ccccccccCCCEEEEEECCCCCEEEEEe
Confidence 1111001111233578999999887665
No 92
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.62 E-value=1.2e-15 Score=154.28 Aligned_cols=198 Identities=16% Similarity=0.102 Sum_probs=137.4
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCC-CCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCe
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYD-QSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF 556 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~-~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 556 (706)
...+.+.+.+...+|..+...+| |+... ....++.|+||++|||++.. +.... ....+..|+++||
T Consensus 15 ~~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~--------~~~~~----~~~~~~~l~~~G~ 81 (283)
T 3bjr_A 15 LYFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTH--------IPVAQ----AESLAMAFAGHGY 81 (283)
T ss_dssp --CCSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTC--------CCHHH----HHHHHHHHHTTTC
T ss_pred cCCCCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCcccc--------CCccc----cHHHHHHHHhCCc
Confidence 34566778898889988888899 76521 00123589999999986421 01000 1234567888999
Q ss_pred EEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEechHHHHHHHHHHhCCCc-------
Q 005240 557 AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL------- 626 (706)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~---~id~~~i~i~G~S~GG~~a~~~~~~~p~~------- 626 (706)
.|+.+++++. +.... .......|+.++++|+.+.. .+|+++|+|+|+|+||++++.++.+.|++
T Consensus 82 ~v~~~d~~g~---~~~~~---~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 155 (283)
T 3bjr_A 82 QAFYLEYTLL---TDQQP---LGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNV 155 (283)
T ss_dssp EEEEEECCCT---TTCSS---CBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTC
T ss_pred EEEEEeccCC---Ccccc---CchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCC
Confidence 9999877653 32200 11234678888999998753 37888999999999999999999999987
Q ss_pred ------eeEEEeccCCCCCCC-----------------------------CCcc------------chHHHHHHHHHhCC
Q 005240 627 ------FCCGIARSGSYNKTL-----------------------------TPFG------------FQAERFFDALKGHG 659 (706)
Q Consensus 627 ------~~a~v~~~~~~d~~~-----------------------------~~~~------------~~~~~~~~~l~~~~ 659 (706)
++++++.+|..+... .|.. -+..+++++|...+
T Consensus 156 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g 235 (283)
T 3bjr_A 156 TPAMLKPNNVVLGYPVISPLLGFPKDDATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAK 235 (283)
T ss_dssp CHHHHCCSSEEEESCCCCTTSBC--------CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTT
T ss_pred CcCCCCccEEEEcCCccccccccccccchHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCC
Confidence 899999998874210 0100 02348999999999
Q ss_pred CcEEEEEeCCCCccCCCcc------------cHHHHHHHHHHHHHHH
Q 005240 660 ALSRLVLLPFEHHVYAARE------------NVMHVIWETDRWLQKY 694 (706)
Q Consensus 660 ~~~~~~~~~~~~H~~~~~~------------~~~~~~~~~~~f~~~~ 694 (706)
.++++++||+++|.+.... ...++.+.+.+||+++
T Consensus 236 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 236 IPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp CCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 9999999999999775321 1257788899999864
No 93
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.62 E-value=2.7e-13 Score=139.94 Aligned_cols=291 Identities=11% Similarity=-0.025 Sum_probs=170.2
Q ss_pred ccceeEeecCCCCCCCCeeeeecCCCCC-cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCC
Q 005240 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (706)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~-~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~ 82 (706)
...|++.|+.. ++......++... ....++|||||++|+++. .....|+++|+.+++.........
T Consensus 10 ~~~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---------~~~~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 10 PDKLVVIDTEK----MAVDKVITIADAGPTPMVPMVAPGGRIAYATV---------NKSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp TTEEEEEETTT----TEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---------TTTTEEEEEETTTCCEEEEEECCB
T ss_pred CCeEEEEECCC----CcEEEEEEcCCCCCCccceEEcCCCCEEEEEe---------CCCCeEEEEECCCCCeEeeEEcCC
Confidence 35688888866 6555433233311 377899999999997765 334689999999887654322211
Q ss_pred cc-ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 83 IC-LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 83 ~~-~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
.. ....+..+.|+|||++|++......... . .+ ......|++
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~------------------~-----~~--------------~~~~~~i~v 119 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLEL------------------T-----HF--------------EVQPTRVAL 119 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECS------------------S-----CE--------------EECCCEEEE
T ss_pred cccccccccceEECCCCCEEEEEeccccccc------------------c-----cc--------------cccCceEEE
Confidence 00 0012568899999998887642100000 0 00 001268999
Q ss_pred Ecc-CCCc-eecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCc
Q 005240 162 GSL-DGTA-KDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNS 239 (706)
Q Consensus 162 ~~l-~g~~-~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~ 239 (706)
+++ +++. ..+..+.....++|||||++|++.. ..|++|++.+++..........
T Consensus 120 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---------------~~i~~~d~~~~~~~~~~~~~~~--------- 175 (337)
T 1pby_B 120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG---------------RDLHVMDPEAGTLVEDKPIQSW--------- 175 (337)
T ss_dssp EETTTTEEEEEEECCSSCCCEEECTTSSCEEEES---------------SSEEEEETTTTEEEEEECSTTT---------
T ss_pred EECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC---------------CeEEEEECCCCcEeeeeecccc---------
Confidence 999 4443 3333334566788999999998771 2699999997765543322110
Q ss_pred cCCCCcceeeecCCCceEEEEEeccCCC-------------CccccCccceeeeecCCCCCCCCceEEe--ecccccccc
Q 005240 240 VREGMRSISWRADKPSTLYWVEAQDRGD-------------ANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSV 304 (706)
Q Consensus 240 ~~~g~~~~~~spdg~~~l~~~~~~~~~~-------------~~~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~~~ 304 (706)
...+.|+|||+. |++.. ..... ..........|+++|+ .+++...+. ........+
T Consensus 176 ----~~~~~~s~dg~~-l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~ 246 (337)
T 1pby_B 176 ----EAETYAQPDVLA-VWNQH-ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL---ETGEMAMREVRIMDVFYFST 246 (337)
T ss_dssp ----TTTTBCCCBCCC-CCCCC-TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET---TTCCEEEEEEEECSSCEEEE
T ss_pred ----CCCceeCCCccE-Eeeec-cCCCceeeeeeccccccccccccccccceEEEeC---CCCCceEeecCCCCCceeeE
Confidence 113478899886 54321 11100 0000011115788888 666665433 223345568
Q ss_pred eecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEe
Q 005240 305 SWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLN 384 (706)
Q Consensus 305 ~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 384 (706)
.|+|||+.|++. ...|+++|++++ +........ .....+.|+|||++|++...
T Consensus 247 ~~s~dg~~l~~~------~~~v~~~d~~~~--~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~------------ 299 (337)
T 1pby_B 247 AVNPAKTRAFGA------YNVLESFDLEKN--ASIKRVPLP-------HSYYSVNVSTDGSTVWLGGA------------ 299 (337)
T ss_dssp EECTTSSEEEEE------ESEEEEEETTTT--EEEEEEECS-------SCCCEEEECTTSCEEEEESB------------
T ss_pred EECCCCCEEEEe------CCeEEEEECCCC--cCcceecCC-------CceeeEEECCCCCEEEEEcC------------
Confidence 999999988875 146899998874 232222211 01224778999998877521
Q ss_pred cCCCCCCCCCCceeeeecCCCceeeeecc
Q 005240 385 GRGFTPEGNIPFLDLFDINTGSKERIWES 413 (706)
Q Consensus 385 ~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (706)
...|..+|+++++....+..
T Consensus 300 ---------~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 300 ---------LGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp ---------SSEEEEEETTTCCEEEEEEC
T ss_pred ---------CCcEEEEECcCCcEEEEEEc
Confidence 11467788888876554433
No 94
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.62 E-value=3.5e-13 Score=139.11 Aligned_cols=279 Identities=11% Similarity=0.044 Sum_probs=168.3
Q ss_pred CceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccch
Q 005240 60 CKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (706)
Q Consensus 60 ~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (706)
....|+++|+++++..+....+.. ...+..++|||||+.|++...
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~--------------------------------- 53 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIADA--GPTPMVPMVAPGGRIAYATVN--------------------------------- 53 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTC--TTCCCCEEECTTSSEEEEEET---------------------------------
T ss_pred CCCeEEEEECCCCcEEEEEEcCCC--CCCccceEEcCCCCEEEEEeC---------------------------------
Confidence 346899999998876654432220 001568899999998877642
Q ss_pred hccCCchhhhhhhhcccceEEEEcc-CCCce-ecCCCc------eEeeeeeCCCCcEEEEEeeccCccccccccc--ccc
Q 005240 140 NLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPA------VYTAVEPSPDQKYVLITSMHRPYSYKVPCAR--FSQ 209 (706)
Q Consensus 140 ~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~-~lt~~~------~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~--~~~ 209 (706)
....|+++|+ +++.. .+.... .+..++|||||++|++........ +... ...
T Consensus 54 ---------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~---~~~~~~~~~ 115 (337)
T 1pby_B 54 ---------------KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLE---LTHFEVQPT 115 (337)
T ss_dssp ---------------TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEEC---SSCEEECCC
T ss_pred ---------------CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccc---cccccccCc
Confidence 1157888998 55443 343222 456789999999998875321000 0000 135
Q ss_pred eEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCC
Q 005240 210 KVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE 289 (706)
Q Consensus 210 ~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 289 (706)
.|++|++.+++........ ..+..+.|+|||+. |++. + ..|+++|+ +++
T Consensus 116 ~i~v~d~~~~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~~---~-----------~~i~~~d~---~~~ 164 (337)
T 1pby_B 116 RVALYDAETLSRRKAFEAP-------------RQITMLAWARDGSK-LYGL---G-----------RDLHVMDP---EAG 164 (337)
T ss_dssp EEEEEETTTTEEEEEEECC-------------SSCCCEEECTTSSC-EEEE---S-----------SSEEEEET---TTT
T ss_pred eEEEEECCCCcEEEEEeCC-------------CCcceeEECCCCCE-EEEe---C-----------CeEEEEEC---CCC
Confidence 8999999876654433221 12346789999997 6654 1 13888888 555
Q ss_pred CceEEeecccccccceecCCCceEEEEeecccc--------------------ceEEEEEcCCCCCCCceeeecCccccc
Q 005240 290 KPEILHKLDLRFRSVSWCDDSLALVNETWYKTS--------------------QTRTWLVCPGSKDVAPRVLFDRVFENV 349 (706)
Q Consensus 290 ~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~--------------------~~~l~~~d~~~~~~~~~~l~~~~~~~~ 349 (706)
+.............+.|+|||+.|++....... ...|+++|+.+++ ...+.-....
T Consensus 165 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~-- 240 (337)
T 1pby_B 165 TLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE--MAMREVRIMD-- 240 (337)
T ss_dssp EEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC--EEEEEEEECS--
T ss_pred cEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC--ceEeecCCCC--
Confidence 554433333323466899999987654321110 1158899988853 3222110000
Q ss_pred ccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCC
Q 005240 350 YSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQ 429 (706)
Q Consensus 350 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~ 429 (706)
.....+.|+|||+++++.. . .|+.+|+++++......... ..
T Consensus 241 ---~~~~~~~~s~dg~~l~~~~-~----------------------~v~~~d~~~~~~~~~~~~~~------------~~ 282 (337)
T 1pby_B 241 ---VFYFSTAVNPAKTRAFGAY-N----------------------VLESFDLEKNASIKRVPLPH------------SY 282 (337)
T ss_dssp ---SCEEEEEECTTSSEEEEEE-S----------------------EEEEEETTTTEEEEEEECSS------------CC
T ss_pred ---CceeeEEECCCCCEEEEeC-C----------------------eEEEEECCCCcCcceecCCC------------ce
Confidence 0112367899999987762 1 47778888887655443321 12
Q ss_pred CceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEee
Q 005240 430 GEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 468 (706)
Q Consensus 430 ~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt 468 (706)
..+.|+|||++|+... ....|++||+++++.....
T Consensus 283 ~~~~~s~dg~~l~~~~----~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGG----ALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp CEEEECTTSCEEEEES----BSSEEEEEETTTCCEEEEE
T ss_pred eeEEECCCCCEEEEEc----CCCcEEEEECcCCcEEEEE
Confidence 3578999998777642 2467999999888755443
No 95
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.61 E-value=1.9e-14 Score=151.15 Aligned_cols=138 Identities=19% Similarity=0.152 Sum_probs=105.8
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeE
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (706)
..+..+.+++.+.||..+.++++.|++ .+. ++.|+||++||++.. . ..+ ...++..|+++||.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~~~~~~p~~-~~~--~~~p~vv~~hG~~~~--------~---~~~---~~~~~~~l~~~G~~ 126 (367)
T 2hdw_A 64 AKVEHRKVTFANRYGITLAADLYLPKN-RGG--DRLPAIVIGGPFGAV--------K---EQS---SGLYAQTMAERGFV 126 (367)
T ss_dssp TTEEEEEEEEECTTSCEEEEEEEEESS-CCS--SCEEEEEEECCTTCC--------T---TSH---HHHHHHHHHHTTCE
T ss_pred CCceeEEEEEecCCCCEEEEEEEeCCC-CCC--CCCCEEEEECCCCCc--------c---hhh---HHHHHHHHHHCCCE
Confidence 446789999999999999999999986 222 358999999997421 0 011 11256778899999
Q ss_pred EEEcCCCCcCCCCCCCC---chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEecc
Q 005240 558 VLAGPSIPIIGEGDKLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 634 (706)
Q Consensus 558 v~~~~~~~~~g~g~~~~---~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~ 634 (706)
|+.++.+| +|.+.. ..........|+.++++++.++..+|++||+++|+|+||++++.++.++| .++++|+.+
T Consensus 127 v~~~d~~g---~g~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~ 202 (367)
T 2hdw_A 127 TLAFDPSY---TGESGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTST 202 (367)
T ss_dssp EEEECCTT---STTSCCSSSSCCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEES
T ss_pred EEEECCCC---cCCCCCcCccccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEec
Confidence 99977764 333322 11225667899999999999988888899999999999999999999997 689999887
Q ss_pred CC
Q 005240 635 GS 636 (706)
Q Consensus 635 ~~ 636 (706)
|.
T Consensus 203 p~ 204 (367)
T 2hdw_A 203 MY 204 (367)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 96
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.61 E-value=1.4e-14 Score=162.53 Aligned_cols=150 Identities=15% Similarity=0.146 Sum_probs=108.2
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHH-HHHHHCCeEE
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAV 558 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v 558 (706)
+..+.+.++..||..|.+++++|++. +++|+||++||-.... ..........+.. ....+ +.|+++||+|
T Consensus 35 ~~~~~v~i~~~DG~~L~~~l~~P~~~-----~~~PvIl~~hpyg~~~---~~~~~~~~~~~~~-~~~~~~~~la~~GyaV 105 (652)
T 2b9v_A 35 YIKREVMVPMRDGVKLYTVIVIPKNA-----RNAPILLTRTPYNAKG---RANRVPNALTMRE-VLPQGDDVFVEGGYIR 105 (652)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHHH---HTCSSTTCSSHHH-HSCGGGHHHHHTTCEE
T ss_pred cEEEEEEEECCCCcEEEEEEEecCCC-----CCccEEEEECCCCCCc---ccccccccccccc-cccchHHHHHhCCCEE
Confidence 46688999999999999999999862 2589999998521100 0000000000000 00113 7899999999
Q ss_pred EEcCCCCcCCCCCCCCch-----hhH---HHHHHHHHHHHHHHHHc-CCCCCCcEEEEEechHHHHHHHHHHhCCCceeE
Q 005240 559 LAGPSIPIIGEGDKLPND-----RFV---EQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (706)
Q Consensus 559 ~~~~~~~~~g~g~~~~~~-----~~~---~~~~~D~~~~~~~l~~~-~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a 629 (706)
+..+.||..+.+..+... .+. ....+|+.++++||.++ +++| .||+++|+||||+++++++.+.|+.|+|
T Consensus 106 v~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka 184 (652)
T 2b9v_A 106 VFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKV 184 (652)
T ss_dssp EEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEE
T ss_pred EEEecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEE
Confidence 998888776655443322 122 25789999999999998 8887 5999999999999999999988899999
Q ss_pred EEeccCCCCC
Q 005240 630 GIARSGSYNK 639 (706)
Q Consensus 630 ~v~~~~~~d~ 639 (706)
+|+.+++.|+
T Consensus 185 ~v~~~~~~d~ 194 (652)
T 2b9v_A 185 AAPESPMVDG 194 (652)
T ss_dssp EEEEEECCCT
T ss_pred EEeccccccc
Confidence 9999988774
No 97
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.60 E-value=4.7e-13 Score=137.73 Aligned_cols=277 Identities=15% Similarity=0.087 Sum_probs=165.5
Q ss_pred cccceeeCCC----CCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecC
Q 005240 32 KINFVSWSPD----GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (706)
Q Consensus 32 ~~~~~~~SPD----G~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~ 107 (706)
.+..++|+|+ ++.|+..+. ++...||-++ +++........+. ...+..+.|+|++..|+..+.
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~--------D~~v~vW~~~--~~~~~~~~~l~gh--~~~v~~~~~~~~~~~l~s~s~- 100 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSL--------DDLVKVWKWR--DERLDLQWSLEGH--QLGVVSVDISHTLPIAASSSL- 100 (321)
T ss_dssp CEEEEEEC-------CEEEEEET--------TSCEEEEEEE--TTEEEEEEEECCC--SSCEEEEEECSSSSEEEEEET-
T ss_pred cEEEEEEecCCCCCCCEEEEEcC--------CCCEEEEECC--CCCeeeeeeeccC--CCCEEEEEECCCCCEEEEEeC-
Confidence 5889999986 456765543 5556666554 4432221111111 113778899999998876542
Q ss_pred CCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC-CceecCCC-ceEeeeeeCC
Q 005240 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEPSP 184 (706)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g-~~~~lt~~-~~~~~~~~Sp 184 (706)
.+.|.++|+ ++ ....+... ..+..++|+|
T Consensus 101 ------------------------------------------------D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp 132 (321)
T 3ow8_A 101 ------------------------------------------------DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP 132 (321)
T ss_dssp ------------------------------------------------TSEEEEEETTTTEEEEEEECCTTCCCCEEECT
T ss_pred ------------------------------------------------CCcEEEEECCCCCEEEEEeCCCccEEEEEECC
Confidence 157888888 55 44445444 5667899999
Q ss_pred CCcEEEEEeeccCcccccccccccceEEEEecCCCeeE-EcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEec
Q 005240 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (706)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~ 263 (706)
||++|+..... ..+.+|++..++.. .+.... ..+..++|+|||+. |+... .
T Consensus 133 dg~~l~~g~~d-------------g~v~i~~~~~~~~~~~~~~~~-------------~~v~~~~~spdg~~-lasg~-~ 184 (321)
T 3ow8_A 133 DSQYLATGTHV-------------GKVNIFGVESGKKEYSLDTRG-------------KFILSIAYSPDGKY-LASGA-I 184 (321)
T ss_dssp TSSEEEEECTT-------------SEEEEEETTTCSEEEEEECSS-------------SCEEEEEECTTSSE-EEEEE-T
T ss_pred CCCEEEEEcCC-------------CcEEEEEcCCCceeEEecCCC-------------ceEEEEEECCCCCE-EEEEc-C
Confidence 99999866543 37899999855433 332211 11347899999986 55332 1
Q ss_pred cCCCCccccCccceeeeecCCCCCCCCc-eEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeee
Q 005240 264 DRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (706)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 342 (706)
.+.|.++|+ .+++. ..+......+..+.|+||++.|+..+.+ + .|.++|+.++ +....+
T Consensus 185 -----------dg~i~iwd~---~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~d--g--~i~iwd~~~~--~~~~~~ 244 (321)
T 3ow8_A 185 -----------DGIINIFDI---ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDD--G--YIKIYDVQHA--NLAGTL 244 (321)
T ss_dssp -----------TSCEEEEET---TTTEEEEEECCCSSCCCEEEECTTSCEEEEECTT--S--CEEEEETTTC--CEEEEE
T ss_pred -----------CCeEEEEEC---CCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCC--C--eEEEEECCCc--ceeEEE
Confidence 124788888 45543 3344556778899999999988876522 3 3556676663 222222
Q ss_pred cCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhh
Q 005240 343 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 422 (706)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 422 (706)
..... ....+.|+|||++|+....+ ..+..+|+.+++....+....
T Consensus 245 ~~h~~------~v~~~~~sp~~~~l~s~s~D---------------------~~v~iwd~~~~~~~~~~~~h~------- 290 (321)
T 3ow8_A 245 SGHAS------WVLNVAFCPDDTHFVSSSSD---------------------KSVKVWDVGTRTCVHTFFDHQ------- 290 (321)
T ss_dssp CCCSS------CEEEEEECTTSSEEEEEETT---------------------SCEEEEETTTTEEEEEECCCS-------
T ss_pred cCCCC------ceEEEEECCCCCEEEEEeCC---------------------CcEEEEeCCCCEEEEEEcCCC-------
Confidence 21111 12247799999988765421 135567777776443332211
Q ss_pred hhhccCCCceecccCCCEEEEEEecCCCCcEEEEEEC
Q 005240 423 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 459 (706)
Q Consensus 423 ~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~ 459 (706)
.....+.|+||++.|+....+.. |.+||.
T Consensus 291 ----~~v~~v~~s~~g~~l~s~~~d~~----i~vwd~ 319 (321)
T 3ow8_A 291 ----DQVWGVKYNGNGSKIVSVGDDQE----IHIYDC 319 (321)
T ss_dssp ----SCEEEEEECTTSSEEEEEETTCC----EEEEEC
T ss_pred ----CcEEEEEECCCCCEEEEEeCCCe----EEEEeC
Confidence 12235789999988876554433 777774
No 98
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.60 E-value=1.4e-14 Score=161.91 Aligned_cols=146 Identities=16% Similarity=0.189 Sum_probs=106.9
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHH---HHHHHCCe
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS---LIFLARRF 556 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~G~ 556 (706)
+..+.+.++..||..|.++++.|++. +++|+||++||-... ..........+...+. +.|+++||
T Consensus 23 ~~~~~v~i~~~DG~~L~~~~~~P~~~-----~~~P~vl~~hgyg~~-------~~~~~~~~~~~~~~~~~~~~~la~~Gy 90 (615)
T 1mpx_A 23 YIKREVMIPMRDGVKLHTVIVLPKGA-----KNAPIVLTRTPYDAS-------GRTERLASPHMKDLLSAGDDVFVEGGY 90 (615)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC-----CSEEEEEEEESSCHH-------HHTCSSCCSSHHHHSCGGGHHHHHTTC
T ss_pred CEEEEEEEECCCCCEEEEEEEeCCCC-----CCeeEEEEEcCCCCc-------cccccccccccccccchhHHHHHhCCe
Confidence 46788999999999999999999862 258999999963210 0000000000000112 78999999
Q ss_pred EEEEcCCCCcCCCCCCCCch-----hhHH---HHHHHHHHHHHHHHHc-CCCCCCcEEEEEechHHHHHHHHHHhCCCce
Q 005240 557 AVLAGPSIPIIGEGDKLPND-----RFVE---QLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPHLF 627 (706)
Q Consensus 557 ~v~~~~~~~~~g~g~~~~~~-----~~~~---~~~~D~~~~~~~l~~~-~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~ 627 (706)
+|+..+.||..+.+..+... .+.. ...+|+.++++||.++ ++.| .||+++|+||||+++++++.+.|++|
T Consensus 91 ~Vv~~D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l 169 (615)
T 1mpx_A 91 IRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPAL 169 (615)
T ss_dssp EEEEEECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTE
T ss_pred EEEEECCCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCce
Confidence 99998888765544333221 1122 5689999999999998 7777 59999999999999999999888999
Q ss_pred eEEEeccCCCC
Q 005240 628 CCGIARSGSYN 638 (706)
Q Consensus 628 ~a~v~~~~~~d 638 (706)
+|+|+.+|+.|
T Consensus 170 ~a~v~~~~~~d 180 (615)
T 1mpx_A 170 KVAVPESPMID 180 (615)
T ss_dssp EEEEEESCCCC
T ss_pred EEEEecCCccc
Confidence 99999999887
No 99
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=5.1e-13 Score=139.02 Aligned_cols=300 Identities=11% Similarity=0.007 Sum_probs=161.7
Q ss_pred CCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccc
Q 005240 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (706)
Q Consensus 59 ~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (706)
+....+|.+|.++|+.+++...... ..+..++|||||+ |++.....
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~---~~p~~~a~spdg~-l~~~~~~~------------------------------ 60 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAAT---QNPTYLALSAKDC-LYSVDKED------------------------------ 60 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEEC---SCCCCEEECTTCE-EEEEEEET------------------------------
T ss_pred CCCEEEEEEcCCCCeEEEeeeeecc---CCcceEEEccCCe-EEEEEecC------------------------------
Confidence 3446678888888887665322110 1256789999999 77654210
Q ss_pred hhccCCchhhhhhhhcccceEEEEcc-CCCceecCC---C-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEE
Q 005240 139 DNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT---P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (706)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~---~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~ 213 (706)
....|+++++ +|+.+.+.. . ..+..++|||||++|++..... ..+.+
T Consensus 61 ----------------~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~------------~~v~v 112 (347)
T 3hfq_A 61 ----------------DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK------------GTAEV 112 (347)
T ss_dssp ----------------TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT------------TEEEE
T ss_pred ----------------CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC------------CEEEE
Confidence 1267888888 555555543 1 4567899999999998776432 37888
Q ss_pred EecC-CCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce
Q 005240 214 WTTD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE 292 (706)
Q Consensus 214 ~~~~-~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 292 (706)
|+++ ++..+.+.........|.. ......+..++|+|||+ |+.. ... .+.|++++++ .+++..
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~spdg~--l~v~-~~~----------~~~v~~~~~~--~~g~~~ 176 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRP-EQDGSHIHYTDLTPDNR--LAVI-DLG----------SDKVYVYNVS--DAGQLS 176 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSST-TCSSCCEEEEEECTTSC--EEEE-ETT----------TTEEEEEEEC--TTSCEE
T ss_pred EEeCCCCCeeecceeecCCCCCCc-cccCCCceEEEECCCCc--EEEE-eCC----------CCEEEEEEEC--CCCcEE
Confidence 8885 3344433322111111100 00001133589999998 5433 211 1247777772 245554
Q ss_pred EEeec----ccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccC--CCCCceEeccCCCE
Q 005240 293 ILHKL----DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSD--PGSPMMTRTSTGTN 366 (706)
Q Consensus 293 ~l~~~----~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~s~dg~~ 366 (706)
.+... ......++|+|||+.|++.. ...+...+|.++..++ +...+........... .....+.|+|||++
T Consensus 177 ~~~~~~~~~g~~p~~~~~spdg~~l~v~~-~~~~~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 177 EQSVLTMEAGFGPRHLVFSPDGQYAFLAG-ELSSQIASLKYDTQTG--AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEE-TTTTEEEEEEEETTTT--EEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred EeeeEEcCCCCCCceEEECCCCCEEEEEe-CCCCEEEEEEecCCCC--ceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 43321 22445689999999888764 3334445666665443 3222211110000000 01124778999999
Q ss_pred EEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecC-CCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEE
Q 005240 367 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN-TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSK 445 (706)
Q Consensus 367 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~ 445 (706)
|++.... ...+..++++ +|+.+.+...... -.....+.|||||++|+++.
T Consensus 254 l~v~~~~--------------------~~~v~v~~~~~~g~~~~~~~~~~~---------~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 254 LYVSNRG--------------------YNTLAVFAVTADGHLTLIQQISTE---------GDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEEET--------------------TTEEEEEEECGGGCEEEEEEEECS---------SSCCCEEEECTTSSEEEEEE
T ss_pred EEEEeCC--------------------CCEEEEEEECCCCcEEEeEEEecC---------CCCcCeEEECCCCCEEEEEE
Confidence 8776532 0124444443 3333333221110 00113578999998776654
Q ss_pred ecCCCCcEEEEEECCCCceeEeec
Q 005240 446 ESKTEITQYHILSWPLKKSSQITN 469 (706)
Q Consensus 446 ~~~~~p~~v~~~~~~~~~~~~lt~ 469 (706)
. ....-.+|.+|.++|+.+.+..
T Consensus 305 ~-~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 305 Q-NTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp T-TTTEEEEEEECTTTCCEEEEEE
T ss_pred c-CCCcEEEEEEeCCCCeEEeccc
Confidence 3 3333345555878888887764
No 100
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.58 E-value=2.3e-13 Score=135.85 Aligned_cols=186 Identities=13% Similarity=0.118 Sum_probs=135.0
Q ss_pred eEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEc
Q 005240 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (706)
Q Consensus 482 ~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (706)
.+...+.+.||..+++.++.|.. +++.|+||++||+++.. +.+.. +....+..|++. |.|+..
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~-----~~~~~~vv~~HG~~~~~--------~~~~~---~~~~~~~~l~~~-~~v~~~ 65 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKN-----QPTKGVIVYIHGGGLMF--------GKAND---LSPQYIDILTEH-YDLIQL 65 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSS-----SSCSEEEEEECCSTTTS--------CCTTC---SCHHHHHHHTTT-EEEEEE
T ss_pred ceEEEEecCCcEEEEEEEEccCC-----CCCCCEEEEEECCcccC--------Cchhh---hHHHHHHHHHhC-ceEEee
Confidence 45677888899999999999974 12469999999986321 11111 112345555566 999997
Q ss_pred CCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC
Q 005240 562 PSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 641 (706)
Q Consensus 562 ~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~ 641 (706)
+.++. +.. .....+.|+.++++++.++ ++..+++|+||||||++++.++.+ ++++++|+.+|..+...
T Consensus 66 d~~~~---~~~-----~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~ 133 (275)
T 3h04_A 66 SYRLL---PEV-----SLDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINT 133 (275)
T ss_dssp CCCCT---TTS-----CHHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCS
T ss_pred ccccC---Ccc-----ccchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccc
Confidence 77633 322 2345678999999999887 567899999999999999999999 78999999998875410
Q ss_pred C----------------------------------------------------------------------------Ccc
Q 005240 642 T----------------------------------------------------------------------------PFG 645 (706)
Q Consensus 642 ~----------------------------------------------------------------------------~~~ 645 (706)
. |..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 213 (275)
T 3h04_A 134 EPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLPPVF 213 (275)
T ss_dssp HHHHSCCHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCCCEE
T ss_pred cccccccchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCCCEE
Confidence 0 000
Q ss_pred c--------hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccH--HHHHHHHHHHHHHHhc
Q 005240 646 F--------QAERFFDALKGHGALSRLVLLPFEHHVYAARENV--MHVIWETDRWLQKYCL 696 (706)
Q Consensus 646 ~--------~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~--~~~~~~~~~f~~~~l~ 696 (706)
. -+.+..+.+.+.-...+++++|+++|.+...... .++.+.+.+||++++.
T Consensus 214 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 214 IAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp EEEETTCSSSCTHHHHHHHTTCSSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEecCCCCCCChHHHHHHHHhcCCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 0 0006666777666678999999999998755443 7899999999999874
No 101
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.58 E-value=3.5e-12 Score=134.62 Aligned_cols=297 Identities=9% Similarity=0.052 Sum_probs=177.7
Q ss_pred CcccceeeCCCC-CeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEec-CCcEEEEEecCC
Q 005240 31 AKINFVSWSPDG-KRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSS 108 (706)
Q Consensus 31 ~~~~~~~~SPDG-~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSp-Dg~~l~~~~~~~ 108 (706)
..+..++||||| +.||.... ...|.++++.+++.......... ...+..+.|+| |++.|+..+.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~-- 139 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSK----------GGDIILWDYDVQNKTSFIQGMGP--GDAITGMKFNQFNTNQLFVSSI-- 139 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEB----------TSCEEEEETTSTTCEEEECCCST--TCBEEEEEEETTEEEEEEEEET--
T ss_pred CCEEEEEECCCCCCEEEEEcC----------CCeEEEEeCCCcccceeeecCCc--CCceeEEEeCCCCCCEEEEEeC--
Confidence 358899999999 77766542 24677788887776555431111 12377899999 6677776532
Q ss_pred CCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecCCC----ceEeeeeeC
Q 005240 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP----AVYTAVEPS 183 (706)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt~~----~~~~~~~~S 183 (706)
.+.|.++++.+ ....+... ..+..++|+
T Consensus 140 -----------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 172 (383)
T 3ei3_B 140 -----------------------------------------------RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVS 172 (383)
T ss_dssp -----------------------------------------------TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEE
T ss_pred -----------------------------------------------CCEEEEEECCCCceEEEeccCCCCCCeEEEEEC
Confidence 15677788865 33333322 457899999
Q ss_pred CCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEec
Q 005240 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~ 263 (706)
|||+.|+..... ..|.+|++.+.....+.... ..+..+.|+|+++..|+ ....
T Consensus 173 ~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~~l~-s~~~ 225 (383)
T 3ei3_B 173 VSRQMLATGDST-------------GRLLLLGLDGHEIFKEKLHK-------------AKVTHAEFNPRCDWLMA-TSSV 225 (383)
T ss_dssp TTTTEEEEEETT-------------SEEEEEETTSCEEEEEECSS-------------SCEEEEEECSSCTTEEE-EEET
T ss_pred CCCCEEEEECCC-------------CCEEEEECCCCEEEEeccCC-------------CcEEEEEECCCCCCEEE-EEeC
Confidence 999998766543 38999999877766665432 22457899999985243 3221
Q ss_pred cCCCCccccCccceeeeecCCCCCC----CCceEEeecccccccceecC-CCceEEEEeeccccceEEEEEcCCCCCCCc
Q 005240 264 DRGDANVEVSPRDIIYTQPAEPAEG----EKPEILHKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (706)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~d~~~~~~----~~~~~l~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 338 (706)
+ ..|.+||+ .. +...........+..+.|+| ||+.|+..+. ...|.++|+.+++ ..
T Consensus 226 d-----------~~i~iwd~---~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~----d~~i~iwd~~~~~-~~ 286 (383)
T 3ei3_B 226 D-----------ATVKLWDL---RNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQ----RNEIRVYSSYDWS-KP 286 (383)
T ss_dssp T-----------SEEEEEEG---GGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEES----SSEEEEEETTBTT-SC
T ss_pred C-----------CEEEEEeC---CCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcC----CCcEEEEECCCCc-cc
Confidence 1 24778888 33 23333345677889999999 9998887652 2357777877753 22
Q ss_pred eeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhh
Q 005240 339 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKY 418 (706)
Q Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 418 (706)
..+..... ............|+|++..++.....+ +.+ . | +....+..+|+.+++..........
T Consensus 287 ~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~s~d---g~~---s--~----s~d~~i~iwd~~~~~~~~~l~~~~~-- 351 (383)
T 3ei3_B 287 DQIIIHPH-RQFQHLTPIKATWHPMYDLIVAGRYPD---DQL---L--L----NDKRTIDIYDANSGGLVHQLRDPNA-- 351 (383)
T ss_dssp SEEEECCB-CCCTTSCCCCCEECSSSSEEEEECBCC---TTT---C--T----TCCCCEEEEETTTCCEEEEECBTTB--
T ss_pred cccccccc-cccccccceEEeccCCCCceEEEecCC---ccc---c--c----CCCCeEEEEecCCCceeeeecCCCC--
Confidence 22221110 000011122346777777766543221 111 1 1 1223477788888875444332110
Q ss_pred hhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 005240 419 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (706)
Q Consensus 419 ~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~ 461 (706)
........|+||++.|+.. ++ ..|.+|++++
T Consensus 352 -------~~~~~~~~~s~~g~~l~s~-sd----~~i~iw~~~~ 382 (383)
T 3ei3_B 352 -------AGIISLNKFSPTGDVLASG-MG----FNILIWNRED 382 (383)
T ss_dssp -------CSCCCEEEECTTSSEEEEE-ET----TEEEEEECC-
T ss_pred -------CceEEEEEEecCccEEEEe-cC----CcEEEEecCC
Confidence 0111235899999877655 32 5699998753
No 102
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.58 E-value=2.2e-12 Score=142.37 Aligned_cols=331 Identities=9% Similarity=0.011 Sum_probs=188.1
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEc--CCCceeecccCCC
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADA--ETGEAKPLFESPD 82 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~--~~g~~~~lt~~~~ 82 (706)
..|.+.|+.. ++.... ++.+..+..+++||||++|+.... + ..|.++|+ ++++...-.....
T Consensus 159 ~~V~v~D~~t----~~~~~~--i~~g~~~~~v~~spdg~~l~v~~~--------d--~~V~v~D~~~~t~~~~~~i~~g~ 222 (543)
T 1nir_A 159 GQIALVDGDS----KKIVKV--IDTGYAVHISRMSASGRYLLVIGR--------D--ARIDMIDLWAKEPTKVAEIKIGI 222 (543)
T ss_dssp TEEEEEETTT----CCEEEE--EECSTTEEEEEECTTSCEEEEEET--------T--SEEEEEETTSSSCEEEEEEECCS
T ss_pred CeEEEEECCC----ceEEEE--EecCcccceEEECCCCCEEEEECC--------C--CeEEEEECcCCCCcEEEEEecCC
Confidence 4578888866 655433 334444778899999999966531 2 68999999 6665433222222
Q ss_pred ccccccccceEEec----CCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccce
Q 005240 83 ICLNAVFGSFVWVN----NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (706)
Q Consensus 83 ~~~~~~~~~~~wSp----Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (706)
.+..+++|| ||++|++... ....
T Consensus 223 -----~p~~va~sp~~~~dg~~l~v~~~------------------------------------------------~~~~ 249 (543)
T 1nir_A 223 -----EARSVESSKFKGYEDRYTIAGAY------------------------------------------------WPPQ 249 (543)
T ss_dssp -----EEEEEEECCSTTCTTTEEEEEEE------------------------------------------------ESSE
T ss_pred -----CcceEEeCCCcCCCCCEEEEEEc------------------------------------------------cCCe
Confidence 267889999 9999887632 1145
Q ss_pred EEEEcc-CCCce-ecCCC------------ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEc
Q 005240 159 LVLGSL-DGTAK-DFGTP------------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL 224 (706)
Q Consensus 159 l~~~~l-~g~~~-~lt~~------------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 224 (706)
|.++|. ++++. .+... ..+..+.+|||++.++++... ...|.+|++...+...+
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------------~g~i~vvd~~~~~~l~~ 317 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------------TGKVLLVNYKDIDNLTV 317 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEECTTSSSCEE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------------CCeEEEEEecCCCccee
Confidence 666776 44332 22211 145678999999988776543 25899999975432111
Q ss_pred ccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecc---ccc
Q 005240 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD---LRF 301 (706)
Q Consensus 225 ~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~---~~~ 301 (706)
+..... ..+..+.|+|||+. |+... . ..+.|.++|. .+++........ ...
T Consensus 318 ~~i~~~-----------~~~~~~~~spdg~~-l~va~-~----------~~~~v~v~D~---~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 318 TSIGAA-----------PFLHDGGWDSSHRY-FMTAA-N----------NSNKVAVIDS---KDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp EEEECC-----------SSCCCEEECTTSCE-EEEEE-G----------GGTEEEEEET---TTTEEEEEEECSSSBCCT
T ss_pred EEeccC-----------cCccCceECCCCCE-EEEEe-c----------CCCeEEEEEC---CCCeEEEeeccCCCCCCC
Confidence 111110 12457899999996 54332 1 1124778888 566554433211 111
Q ss_pred cccee-cCCCceEEEEeeccccceEEEEEcCCCCC-----CCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccC
Q 005240 302 RSVSW-CDDSLALVNETWYKTSQTRTWLVCPGSKD-----VAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 375 (706)
Q Consensus 302 ~~~~w-spDg~~l~~~~~~~~~~~~l~~~d~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 375 (706)
..+.| +|++..++++....++ .|-++|.++.+ .+........ ..+...+.++|||++|+.....
T Consensus 372 ~g~~~~~p~~g~~~~s~~~~d~--~V~v~d~~~~~~~~~~~~~v~~l~~~------g~~~~~v~~~pdg~~l~v~~~~-- 441 (543)
T 1nir_A 372 RGANFVHPKYGPVWSTSHLGDG--SISLIGTDPKNHPQYAWKKVAELQGQ------GGGSLFIKTHPKSSHLYVDTTF-- 441 (543)
T ss_dssp TCEEEEETTTEEEEEEEBSSSS--EEEEEECCTTTCTTTBTSEEEEEECS------CSCCCCEECCTTCCEEEECCTT--
T ss_pred CCcccCCCCCccEEEeccCCCc--eEEEEEeCCCCCchhcCeEEEEEEcC------CCCceEEEcCCCCCcEEEecCC--
Confidence 22333 6886666554322223 35566655521 1111112211 1233457789999999876411
Q ss_pred CcceEEEEecCCCCCCC-CCCceeeeecCCCcee-eeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecC-CCCc
Q 005240 376 DEQIYILLNGRGFTPEG-NIPFLDLFDINTGSKE-RIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESK-TEIT 452 (706)
Q Consensus 376 ~~~~~~~~~~~g~~~~~-~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~-~~p~ 452 (706)
.++. ....+..+|+++++.. +++..... ..+...-.....+.|+|||++++++..+. ....
T Consensus 442 -------------~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~---~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~ 505 (543)
T 1nir_A 442 -------------NPDARISQSVAVFDLKNLDAKYQVLPIAEW---ADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSS 505 (543)
T ss_dssp -------------CSSHHHHTCEEEEETTCTTSCCEEECHHHH---HCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCC
T ss_pred -------------CCCcccCceEEEEECCCCCCCeEEeechhh---cccCCCCCceEeccCCCCCCEEEEEeecCCCCCC
Confidence 0100 0124778888887654 33322110 00000001112579999999999887654 3467
Q ss_pred EEEEEECCCCceeEee
Q 005240 453 QYHILSWPLKKSSQIT 468 (706)
Q Consensus 453 ~v~~~~~~~~~~~~lt 468 (706)
.|.+||.++++++..-
T Consensus 506 ~i~v~D~~t~~~~~~i 521 (543)
T 1nir_A 506 ALVVVDDKTLKLKAVV 521 (543)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred eEEEEECCCceEEEee
Confidence 8999999999876544
No 103
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.58 E-value=9.5e-13 Score=140.50 Aligned_cols=240 Identities=11% Similarity=0.113 Sum_probs=135.6
Q ss_pred CcccceeeCCCCC-eEEEEeeccccccccCCceeEEEEEc----CCCc-------eeecccCCCcc-----ccccccceE
Q 005240 31 AKINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADA----ETGE-------AKPLFESPDIC-----LNAVFGSFV 93 (706)
Q Consensus 31 ~~~~~~~~SPDG~-~laf~~~~~~~~~~~~~~~~l~~~d~----~~g~-------~~~lt~~~~~~-----~~~~~~~~~ 93 (706)
..+..++|||||+ +||.... + ..|.++++ .+++ ...+....... ....+..+.
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~--------d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEK--------N--SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEET--------B--TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred CceEEEEECCCCCcEEEEecC--------C--ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 3688999999999 8877642 3 45666666 6665 22232210000 011377899
Q ss_pred EecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecC
Q 005240 94 WVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG 172 (706)
Q Consensus 94 wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt 172 (706)
|+|||++|+..... +.|.+++.++ ....+.
T Consensus 116 ~s~~~~~l~~~~~d-------------------------------------------------g~i~i~~~~~~~~~~~~ 146 (425)
T 1r5m_A 116 WSHDGNSIVTGVEN-------------------------------------------------GELRLWNKTGALLNVLN 146 (425)
T ss_dssp ECTTSSEEEEEETT-------------------------------------------------SCEEEEETTSCEEEEEC
T ss_pred EcCCCCEEEEEeCC-------------------------------------------------CeEEEEeCCCCeeeecc
Confidence 99999998876421 4566667766 444454
Q ss_pred CC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCC--------------------
Q 005240 173 TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE-------------------- 231 (706)
Q Consensus 173 ~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~-------------------- 231 (706)
.. ..+..++|+|||++|+..+..+ .+.+|++.+++...........
T Consensus 147 ~~~~~v~~~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (425)
T 1r5m_A 147 FHRAPIVSVKWNKDGTHIISMDVEN-------------VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVE 213 (425)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTC-------------CEEEEETTTTEEEEEECCC---------------CCCBSCCE
T ss_pred CCCccEEEEEECCCCCEEEEEecCC-------------eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEE
Confidence 44 6788999999999998766432 5666666544322211111000
Q ss_pred -----------------------CCCc-ccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCC
Q 005240 232 -----------------------DIPV-CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE 287 (706)
Q Consensus 232 -----------------------~~p~-~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 287 (706)
..+. .+......+..+.|+|+++. |+... . ...|.++|+ .
T Consensus 214 ~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~-~-----------d~~i~i~d~---~ 277 (425)
T 1r5m_A 214 WVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKL-LLSAS-D-----------DGTLRIWHG---G 277 (425)
T ss_dssp EEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTE-EEEEE-T-----------TSCEEEECS---S
T ss_pred EcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCE-EEEEc-C-----------CCEEEEEEC---C
Confidence 0000 00000112346788888875 44331 1 124788887 4
Q ss_pred CCC-ceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCE
Q 005240 288 GEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTN 366 (706)
Q Consensus 288 ~~~-~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~ 366 (706)
.++ ...+......+..+.|+||+ .|+..+ . ...|.++|+.++ +........-. ....+.|+|+|++
T Consensus 278 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~-~---d~~i~i~d~~~~--~~~~~~~~~~~------~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 278 NGNSQNCFYGHSQSIVSASWVGDD-KVISCS-M---DGSVRLWSLKQN--TLLALSIVDGV------PIFAGRISQDGQK 344 (425)
T ss_dssp SBSCSEEECCCSSCEEEEEEETTT-EEEEEE-T---TSEEEEEETTTT--EEEEEEECTTC------CEEEEEECTTSSE
T ss_pred CCccceEecCCCccEEEEEECCCC-EEEEEe-C---CCcEEEEECCCC--cEeEecccCCc------cEEEEEEcCCCCE
Confidence 444 34455567788899999999 555543 2 235778888763 23332221111 1223678999998
Q ss_pred EEEee
Q 005240 367 VIAKI 371 (706)
Q Consensus 367 l~~~~ 371 (706)
|+...
T Consensus 345 l~~~~ 349 (425)
T 1r5m_A 345 YAVAF 349 (425)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87764
No 104
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.58 E-value=2.1e-13 Score=131.45 Aligned_cols=163 Identities=17% Similarity=0.080 Sum_probs=118.7
Q ss_pred CceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH--CCeEEEEcCCC----------------CcCCCCCCC
Q 005240 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI----------------PIIGEGDKL 573 (706)
Q Consensus 512 ~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~----------------~~~g~g~~~ 573 (706)
+.|+||++||.+.. ... ....+..|++ .||.|+.++.. ...|+|...
T Consensus 13 ~~~~vv~~HG~~~~-----------~~~----~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~ 77 (218)
T 1auo_A 13 ADACVIWLHGLGAD-----------RYD----FMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPAR 77 (218)
T ss_dssp CSEEEEEECCTTCC-----------TTT----THHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSC
T ss_pred CCcEEEEEecCCCC-----------hhh----HHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccc
Confidence 47999999996421 011 1245677777 99999996643 222444321
Q ss_pred C-chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHH-hCCCceeEEEeccCCCCCCC----------
Q 005240 574 P-NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTL---------- 641 (706)
Q Consensus 574 ~-~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~-~~p~~~~a~v~~~~~~d~~~---------- 641 (706)
. .........+|+..+++++.+ ..+|+++|+++|+|+||++++.++. ++|++++++++.+|......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 156 (218)
T 1auo_A 78 SISLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELELSASQQ 156 (218)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTCCCCHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCchhhhhhhhccc
Confidence 1 223355667888888888876 3478899999999999999999999 99999999999999876311
Q ss_pred -CCcc---------c---hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 642 -TPFG---------F---QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 642 -~~~~---------~---~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
.|.. . ..+++++.|...+.++++++++ ++|.+.. +..+.+.+||+++|+
T Consensus 157 ~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~-----~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 157 RIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLP-----QEIHDIGAWLAARLG 218 (218)
T ss_dssp TCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCH-----HHHHHHHHHHHHHHC
T ss_pred CCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCH-----HHHHHHHHHHHHHhC
Confidence 1110 0 2348889999988899999999 9998753 457889999999873
No 105
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.58 E-value=8.8e-15 Score=149.96 Aligned_cols=185 Identities=17% Similarity=0.089 Sum_probs=133.9
Q ss_pred ceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHH-HCCeEEE
Q 005240 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVL 559 (706)
Q Consensus 481 ~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~ 559 (706)
..+.+++++.+| .+++++| |. .++.|+||++|||++.. ++...+ ..++..|+ +.||.|+
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~------~~~~p~vv~~HGgg~~~--------g~~~~~----~~~~~~la~~~g~~Vv 114 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ------KPDSPVLVYYHGGGFVI--------CSIESH----DALCRRIARLSNSTVV 114 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES------SSSEEEEEEECCSTTTS--------CCTGGG----HHHHHHHHHHHTSEEE
T ss_pred eEEEEEecCCCC-cEEEEEE-cC------CCCceEEEEECCccccc--------CChhHh----HHHHHHHHHHhCCEEE
Confidence 578888988787 8999999 42 12479999999986532 111111 23556677 5899999
Q ss_pred EcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEechHHHHHHHHHHhCCCc----eeEEEe
Q 005240 560 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIA 632 (706)
Q Consensus 560 ~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~---~id~~~i~i~G~S~GG~~a~~~~~~~p~~----~~a~v~ 632 (706)
.+++++ .|+... .....|+.++++|+.+.. .+|+++|+|+|+|+||++|+.++.+.|++ ++++++
T Consensus 115 ~~dyrg---~g~~~~-----p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl 186 (311)
T 1jji_A 115 SVDYRL---APEHKF-----PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQIL 186 (311)
T ss_dssp EEECCC---TTTSCT-----THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred EecCCC---CCCCCC-----CCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 988764 443321 224678888888888752 37888999999999999999999887665 999999
Q ss_pred ccCCCCCCCC-------------------------------------------------Ccc----------chHHHHHH
Q 005240 633 RSGSYNKTLT-------------------------------------------------PFG----------FQAERFFD 653 (706)
Q Consensus 633 ~~~~~d~~~~-------------------------------------------------~~~----------~~~~~~~~ 653 (706)
.+|..+.... |.. -+..++++
T Consensus 187 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~P~li~~G~~D~l~~~~~~~~~ 266 (311)
T 1jji_A 187 IYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPLRDEGEVFGQ 266 (311)
T ss_dssp ESCCCCSSSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTTHHHHHHHHH
T ss_pred eCCccCCCCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCcccccccCCChheEEEcCcCcchHHHHHHHH
Confidence 9997653210 000 01226889
Q ss_pred HHHhCCCcEEEEEeCCCCccCCCc----ccHHHHHHHHHHHHHH
Q 005240 654 ALKGHGALSRLVLLPFEHHVYAAR----ENVMHVIWETDRWLQK 693 (706)
Q Consensus 654 ~l~~~~~~~~~~~~~~~~H~~~~~----~~~~~~~~~~~~f~~~ 693 (706)
+|++.++++++++|||++|.|... ....++.+.+.+||++
T Consensus 267 ~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 267 MLRRAGVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHcCCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 999999999999999999988632 2346778888888864
No 106
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.57 E-value=9.6e-14 Score=137.41 Aligned_cols=187 Identities=16% Similarity=0.100 Sum_probs=129.8
Q ss_pred EEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCC
Q 005240 485 IKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSI 564 (706)
Q Consensus 485 ~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 564 (706)
+++.. ||..|.++++.|++. . ++.|+||++||.+.. .........+..|++.||.|+..+.+
T Consensus 4 ~~~~~-~g~~l~~~~~~p~~~-~---~~~p~vvl~HG~~~~-------------~~~~~~~~~~~~l~~~g~~vi~~D~~ 65 (251)
T 2wtm_A 4 MYIDC-DGIKLNAYLDMPKNN-P---EKCPLCIIIHGFTGH-------------SEERHIVAVQETLNEIGVATLRADMY 65 (251)
T ss_dssp EEEEE-TTEEEEEEEECCTTC-C---SSEEEEEEECCTTCC-------------TTSHHHHHHHHHHHHTTCEEEEECCT
T ss_pred eEEec-CCcEEEEEEEccCCC-C---CCCCEEEEEcCCCcc-------------cccccHHHHHHHHHHCCCEEEEecCC
Confidence 45554 899999999999752 1 236899999995311 00000113456788899999996665
Q ss_pred CcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCC---
Q 005240 565 PIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK--- 639 (706)
Q Consensus 565 ~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~--- 639 (706)
|+|.+... ........+|+.++++++.++..+ +++.++||||||.+++.++.++|++++++|+.+|....
T Consensus 66 ---G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 140 (251)
T 2wtm_A 66 ---GHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI 140 (251)
T ss_dssp ---TSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH
T ss_pred ---CCCCCCCccccCCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHH
Confidence 55555332 123456688999999999765444 48999999999999999999999999999999886320
Q ss_pred -------------CCCCcc-------------------ch--H---------------------HHHHHHHHhCCCcEEE
Q 005240 640 -------------TLTPFG-------------------FQ--A---------------------ERFFDALKGHGALSRL 664 (706)
Q Consensus 640 -------------~~~~~~-------------------~~--~---------------------~~~~~~l~~~~~~~~~ 664 (706)
...+.. +. . .+..+.+.+.-...++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~ 220 (251)
T 2wtm_A 141 ARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKL 220 (251)
T ss_dssp HHHTEETTEECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSSSEEE
T ss_pred HhhhhhccccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCCCcEE
Confidence 000100 00 0 0334444433346899
Q ss_pred EEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 665 VLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 665 ~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
+++|+++|.+ ......+.+.+.+||++++.
T Consensus 221 ~~~~~~gH~~--~~~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 221 VTIPGDTHCY--DHHLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp EEETTCCTTC--TTTHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCccc--chhHHHHHHHHHHHHHHhcc
Confidence 9999999998 56778899999999999875
No 107
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.57 E-value=1.5e-13 Score=142.68 Aligned_cols=133 Identities=17% Similarity=0.166 Sum_probs=101.6
Q ss_pred CceEEE-EEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEE
Q 005240 480 LQKEMI-KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (706)
Q Consensus 480 ~~~~~~-~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (706)
+..+.+ .+...||..|.++++.|.+ .+.|+||++||.+... . .....+..|+++||.|
T Consensus 32 ~~~~~~~~~~~~dg~~l~~~~~~p~~------~~~p~vv~~HG~~~~~-----------~----~~~~~~~~l~~~g~~v 90 (342)
T 3hju_A 32 IPYQDLPHLVNADGQYLFCRYWKPTG------TPKALIFVSHGAGEHS-----------G----RYEELARMLMGLDLLV 90 (342)
T ss_dssp CBTTSSCEEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCCG-----------G----GGHHHHHHHHTTTEEE
T ss_pred cccccCceEEccCCeEEEEEEeCCCC------CCCcEEEEECCCCccc-----------c----hHHHHHHHHHhCCCeE
Confidence 344455 6778899999999998864 1358999999974210 1 1124567788889999
Q ss_pred EEcCCCCcCCCCCCCCc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 559 LAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 559 ~~~~~~~~~g~g~~~~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
+..+.+ |+|.+... .......++|+.++++++..+ .+..+|+|+|+|+||++++.++.++|++++++|+.+|
T Consensus 91 i~~D~~---G~G~S~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~ 165 (342)
T 3hju_A 91 FAHDHV---GHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISP 165 (342)
T ss_dssp EEECCT---TSTTSCSSTTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESC
T ss_pred EEEcCC---CCcCCCCcCCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECc
Confidence 997766 44544321 233566789999999999887 4567999999999999999999999999999999998
Q ss_pred CCC
Q 005240 636 SYN 638 (706)
Q Consensus 636 ~~d 638 (706)
...
T Consensus 166 ~~~ 168 (342)
T 3hju_A 166 LVL 168 (342)
T ss_dssp CCS
T ss_pred ccc
Confidence 754
No 108
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.57 E-value=3.6e-14 Score=145.03 Aligned_cols=176 Identities=17% Similarity=0.188 Sum_probs=129.0
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|.. .+.+++|.... +.|+||++||.+.. ...+ ..++..|+++||.|+.+++++ +
T Consensus 79 ~~g~~-~~~~~~p~~~~-----~~p~vv~~HG~~~~-----------~~~~----~~~~~~la~~G~~vv~~d~~g---~ 134 (306)
T 3vis_A 79 ADGFG-GGTIYYPRENN-----TYGAIAISPGYTGT-----------QSSI----AWLGERIASHGFVVIAIDTNT---T 134 (306)
T ss_dssp CSSSC-CEEEEEESSCS-----CEEEEEEECCTTCC-----------HHHH----HHHHHHHHTTTEEEEEECCSS---T
T ss_pred cCCCc-ceEEEeeCCCC-----CCCEEEEeCCCcCC-----------HHHH----HHHHHHHHhCCCEEEEecCCC---C
Confidence 34533 46788887621 47999999996421 1111 245677888999999977763 4
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHc------CCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC--
Q 005240 570 GDKLPNDRFVEQLVSSAEAAVEEVVRR------GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-- 641 (706)
Q Consensus 570 g~~~~~~~~~~~~~~D~~~~~~~l~~~------~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~-- 641 (706)
|.+ ......|+..+++|+.+. ..+|++||+++|+|+||++++.++.++|+ ++++++.+|......
T Consensus 135 g~s------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~ 207 (306)
T 3vis_A 135 LDQ------PDSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHLNKSWR 207 (306)
T ss_dssp TCC------HHHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSCCCCT
T ss_pred CCC------cchHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccCccccc
Confidence 433 123457888999999987 67889999999999999999999999976 999999998654221
Q ss_pred ---CC-------------ccchHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhccC
Q 005240 642 ---TP-------------FGFQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 698 (706)
Q Consensus 642 ---~~-------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~~ 698 (706)
.| ...+.++++++|...+ +++++++++++|.+... ...++.+.+.+||++++...
T Consensus 208 ~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~~-~~~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 208 DITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT-DKAYLELDGASHFAPNI-TNKTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp TCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGGS-CCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCEEEEecCCCcccCcchhHHHHHHHhccCC-CceEEEECCCCccchhh-chhHHHHHHHHHHHHHccCc
Confidence 12 1113557777777665 89999999999998643 33678899999999998754
No 109
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.57 E-value=1.8e-14 Score=148.81 Aligned_cols=174 Identities=8% Similarity=-0.033 Sum_probs=126.9
Q ss_pred EEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHH-HCCeEEEEcCCCCcCCCCCCC
Q 005240 495 LTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSIPIIGEGDKL 573 (706)
Q Consensus 495 i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~~~~g~g~~~ 573 (706)
+..+++.|.+ . +.|+||++|||++.. +.... ...++..|+ +.||.|+.+++++....
T Consensus 84 ~~~~~~~p~~---~---~~p~vv~lHGgg~~~--------~~~~~----~~~~~~~la~~~g~~vi~~D~r~~~~~---- 141 (326)
T 3d7r_A 84 MQVFRFNFRH---Q---IDKKILYIHGGFNAL--------QPSPF----HWRLLDKITLSTLYEVVLPIYPKTPEF---- 141 (326)
T ss_dssp EEEEEEESTT---C---CSSEEEEECCSTTTS--------CCCHH----HHHHHHHHHHHHCSEEEEECCCCTTTS----
T ss_pred EEEEEEeeCC---C---CCeEEEEECCCcccC--------CCCHH----HHHHHHHHHHHhCCEEEEEeCCCCCCC----
Confidence 6677888865 1 258999999986421 11011 112345566 46999999888753221
Q ss_pred CchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCc----eeEEEeccCCCCCCCC-------
Q 005240 574 PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSYNKTLT------- 642 (706)
Q Consensus 574 ~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~----~~a~v~~~~~~d~~~~------- 642 (706)
.....++|+.++++++.++ +|+++|+|+|+|+||++|+.++.+.|++ ++++|+.+|..+....
T Consensus 142 ----~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~ 215 (326)
T 3d7r_A 142 ----HIDDTFQAIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDA 215 (326)
T ss_dssp ----CHHHHHHHHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHH
T ss_pred ----CchHHHHHHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhh
Confidence 1345678999999999887 6889999999999999999999887766 9999999997653210
Q ss_pred ------------------------------------------Ccc---------c-hHHHHHHHHHhCCCcEEEEEeCCC
Q 005240 643 ------------------------------------------PFG---------F-QAERFFDALKGHGALSRLVLLPFE 670 (706)
Q Consensus 643 ------------------------------------------~~~---------~-~~~~~~~~l~~~~~~~~~~~~~~~ 670 (706)
|.. . +..++.++|...+.++++++||++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 295 (326)
T 3d7r_A 216 LIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKM 295 (326)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred hcccCcccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccchHHHHHHHHHHHHCCCcEEEEEeCCC
Confidence 000 0 112788899999999999999999
Q ss_pred CccCCC--cccHHHHHHHHHHHHHHHhc
Q 005240 671 HHVYAA--RENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 671 ~H~~~~--~~~~~~~~~~~~~f~~~~l~ 696 (706)
+|.+.. .....++.+.+.+||++++.
T Consensus 296 ~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 296 VHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp CTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 998864 24566888999999988774
No 110
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.57 E-value=3.9e-13 Score=154.53 Aligned_cols=207 Identities=13% Similarity=0.097 Sum_probs=132.6
Q ss_pred cccceeeC-CCCCeEEEEeeccccccccCCceeEEEEEcCCC-ceeecccCCCccccccccceEEecCCcEEEEEecCCC
Q 005240 32 KINFVSWS-PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (706)
Q Consensus 32 ~~~~~~~S-PDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g-~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~ 109 (706)
....++|| |||++|||+.+. .++...+||++|+++| +. +.. .+......+.|||||+.|+|......
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~-----~G~~~~~l~v~dl~~g~~~--l~~----~~~~~~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDM-----SGNEVYTIEFKRISDPSQT--IAD----KVSGTNGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEES-----SSSSCEEEEEEETTCTTCC--CCC----CEEEECSCCEECSSTTEEEEEEECTT
T ss_pred EEeeeEecCCCCCEEEEEEeC-----CCCceEEEEEEECCCCCEe--CCc----cccCceeeEEEecCCCEEEEEEECCC
Confidence 35679999 999999999863 1233467999999998 62 221 11112457899999999999854211
Q ss_pred CCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-C--ceecCC---CceEeeeeeC
Q 005240 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-T--AKDFGT---PAVYTAVEPS 183 (706)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~--~~~lt~---~~~~~~~~~S 183 (706)
. ...+||++++.+ + .+.+.. ......+.||
T Consensus 244 ~--------------------------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~S 279 (751)
T 2xe4_A 244 L--------------------------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKA 279 (751)
T ss_dssp C--------------------------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEEC
T ss_pred C--------------------------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEEC
Confidence 0 115899999944 3 233422 1345678999
Q ss_pred CCCcEEEEEeeccCcccccccccccceEEEEecCCC--ee--EEcccCCCCCCCCcccCccCCCCcceeeecC---CCce
Q 005240 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--LV--RELCDLPPAEDIPVCYNSVREGMRSISWRAD---KPST 256 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~--~~l~~~~~~~~~p~~~~~~~~g~~~~~~spd---g~~~ 256 (706)
|||++|++...... ..+|++++++++ +. +.|+.... ...|+++ |+.
T Consensus 280 pDg~~l~~~~~~~~----------~~~l~~~d~~~~~~~~~~~~l~~~~~----------------~~~~s~~~~~g~~- 332 (751)
T 2xe4_A 280 ADTNTLCIGSQSPE----------TAEVHLLDLRKGNAHNTLEIVRPREK----------------GVRYDVQMHGTSH- 332 (751)
T ss_dssp TTSSEEEEEEECSS----------CEEEEEEESSSCTTCCCEEESSCCCT----------------TCCEEEEEETTTE-
T ss_pred CCCCEEEEEecCCC----------CceEEEEECCCCCCCceeEEeecCCC----------------CceEEEeeeeCCE-
Confidence 99999999886532 468999999864 34 55554321 2256666 777
Q ss_pred EEEEEeccCCCCccccCccceeeeecCCCCCC-CCceE-EeecccccccceecCCCceEEEEeeccccceEEEEEcC
Q 005240 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EKPEI-LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (706)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~-l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (706)
|+|+.+.++. .+..|+.+++ ++ ++.+. |........-..|++++..|++.... ++..+|+++++
T Consensus 333 l~~~t~~~~a-------~~~~L~~~d~---~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~-~g~~~l~~~dl 398 (751)
T 2xe4_A 333 LVILTNEGGA-------VNHKLLIAPR---GQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRR-AGLTRIWTMMA 398 (751)
T ss_dssp EEEEECTTTC-------TTCEEEEEET---TSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEE-TTEEEEEEEEC
T ss_pred EEEEeCCCCC-------CCcEEEEEcC---CCcccceeeEECCCCCcEEEEEEEECCEEEEEEEe-CCEEEEEEEec
Confidence 8888765411 1235888888 43 45455 54433322222344556677776544 36778999997
No 111
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.57 E-value=1.4e-13 Score=137.07 Aligned_cols=188 Identities=15% Similarity=0.151 Sum_probs=133.3
Q ss_pred CceEEEEEEcc--CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeE
Q 005240 480 LQKEMIKYQRK--DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (706)
Q Consensus 480 ~~~~~~~~~~~--dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (706)
...+.+.++.. ++. ..+.+++|.... .++.|+||++||.+.. ...+ ..++..|+++||.
T Consensus 23 ~~~~~~~~~~~~~~~~-~~~~l~~p~~~~---~~~~p~vv~~HG~~~~-----------~~~~----~~~~~~l~~~G~~ 83 (262)
T 1jfr_A 23 YATSQTSVSSLVASGF-GGGTIYYPTSTA---DGTFGAVVISPGFTAY-----------QSSI----AWLGPRLASQGFV 83 (262)
T ss_dssp SCEEEEEECTTTCSSS-CCEEEEEESCCT---TCCEEEEEEECCTTCC-----------GGGT----TTHHHHHHTTTCE
T ss_pred CCccceEecceeccCC-CceeEEecCCCC---CCCCCEEEEeCCcCCC-----------chhH----HHHHHHHHhCCCE
Confidence 34566666654 332 257788887521 2357999999996421 1111 2356778899999
Q ss_pred EEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEec
Q 005240 558 VLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 633 (706)
Q Consensus 558 v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~----~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 633 (706)
|+..+.+ |.|.. ......|+..+++++.+ ...++.++|+++|||+||++++.++.++|+ ++++|+.
T Consensus 84 v~~~d~~---g~g~~------~~~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~ 153 (262)
T 1jfr_A 84 VFTIDTN---TTLDQ------PDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPL 153 (262)
T ss_dssp EEEECCS---STTCC------HHHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEE
T ss_pred EEEeCCC---CCCCC------CchhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEee
Confidence 9997775 34432 12345788899999988 344678899999999999999999999987 8999999
Q ss_pred cCCCCCCC-----CCcc------------ch-HHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHh
Q 005240 634 SGSYNKTL-----TPFG------------FQ-AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 695 (706)
Q Consensus 634 ~~~~d~~~-----~~~~------------~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l 695 (706)
+|...... .|.. -. ..++++.|. .+.+++++++++++|.+... ...++.+.+.+||++++
T Consensus 154 ~p~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~H~~~~~-~~~~~~~~i~~fl~~~l 231 (262)
T 1jfr_A 154 TGWNTDKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLP-GSLDKAYLELRGASHFTPNT-SDTTIAKYSISWLKRFI 231 (262)
T ss_dssp SCCCSCCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSC-TTSCEEEEEETTCCTTGGGS-CCHHHHHHHHHHHHHHH
T ss_pred cccCccccccccCCCEEEEecCccccCCchhhHHHHHHHhh-cCCCceEEEeCCCCcCCccc-chHHHHHHHHHHHHHHh
Confidence 98754221 1210 12 557777773 35688999999999998643 34688999999999998
Q ss_pred ccC
Q 005240 696 LSN 698 (706)
Q Consensus 696 ~~~ 698 (706)
...
T Consensus 232 ~~~ 234 (262)
T 1jfr_A 232 DSD 234 (262)
T ss_dssp SCC
T ss_pred cCc
Confidence 754
No 112
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.56 E-value=1.8e-14 Score=137.99 Aligned_cols=159 Identities=13% Similarity=0.061 Sum_probs=108.1
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc-----hhhHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN-----DRFVEQLVSSAE 587 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~-----~~~~~~~~~D~~ 587 (706)
.|+||++||-+.. ...+ ..+++.|...|+.|++++..+...|+..+.. ....+.....+.
T Consensus 22 ~~~Vv~lHG~G~~-----------~~~~----~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~ 86 (210)
T 4h0c_A 22 KKAVVMLHGRGGT-----------AADI----ISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVG 86 (210)
T ss_dssp SEEEEEECCTTCC-----------HHHH----HGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHH
T ss_pred CcEEEEEeCCCCC-----------HHHH----HHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHH
Confidence 5899999994210 0011 1123445568999999887665555443332 122333444455
Q ss_pred HHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC------------CCcc----------
Q 005240 588 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL------------TPFG---------- 645 (706)
Q Consensus 588 ~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~------------~~~~---------- 645 (706)
.+++.+.+. .+|++||+++|+|+||++|+.++.++|++|+++++++|...... +|..
T Consensus 87 ~~~~~~~~~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~~~~~~~~~~~Pvl~~hG~~D~~v 165 (210)
T 4h0c_A 87 EVVAEIEAQ-GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAIGNYKGDFKQTPVFISTGNPDPHV 165 (210)
T ss_dssp HHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCGGGCCBCCTTCEEEEEEEESCTTS
T ss_pred HHHHHHHHh-CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhhhhhhhhccCCceEEEecCCCCcc
Confidence 555555444 48999999999999999999999999999999999988542111 1211
Q ss_pred --chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHH
Q 005240 646 --FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQ 692 (706)
Q Consensus 646 --~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~ 692 (706)
-..++++++|++.|.++++++|||++|.++. +..+.+.+||.
T Consensus 166 p~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~-----~el~~i~~wL~ 209 (210)
T 4h0c_A 166 PVSRVQESVTILEDMNAAVSQVVYPGRPHTISG-----DEIQLVNNTIL 209 (210)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEETCCSSCCH-----HHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCCCcCH-----HHHHHHHHHHc
Confidence 1234899999999999999999999998863 34566666664
No 113
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.56 E-value=6e-14 Score=140.62 Aligned_cols=184 Identities=13% Similarity=-0.008 Sum_probs=124.0
Q ss_pred CeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH--CCeEEEEcCCC---Cc
Q 005240 492 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI---PI 566 (706)
Q Consensus 492 g~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~---~~ 566 (706)
+.....+...|+. +++ +.|+||++||.+.. ...+ ..+++.|+. .++.++.++.. ..
T Consensus 49 ~~~~l~y~~~p~~--~~~--~~plVI~LHG~G~~-----------~~~~----~~~~~~l~~~~~~~~~v~P~Ap~~~~~ 109 (285)
T 4fhz_A 49 MTRKLTFGRRGAA--PGE--ATSLVVFLHGYGAD-----------GADL----LGLAEPLAPHLPGTAFVAPDAPEPCRA 109 (285)
T ss_dssp CCCCCCEEEEESC--TTC--CSEEEEEECCTTBC-----------HHHH----HTTHHHHGGGSTTEEEEEECCSEECTT
T ss_pred ccccceeecCCCC--CCC--CCcEEEEEcCCCCC-----------HHHH----HHHHHHHHHhCCCeEEEecCCCccccc
Confidence 3344445566654 233 58999999994310 0111 123455654 48888875431 22
Q ss_pred CCCCCCCCch------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEecc
Q 005240 567 IGEGDKLPND------------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 634 (706)
Q Consensus 567 ~g~g~~~~~~------------~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~ 634 (706)
.|.|..|... ........++.+.++.+.++.-+|++||+|+|+|+||++|+.++.++|++|+++|+++
T Consensus 110 ~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~s 189 (285)
T 4fhz_A 110 NGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFS 189 (285)
T ss_dssp SSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEES
T ss_pred CCCcccccccccccCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEee
Confidence 2344444221 1122345677777888877767999999999999999999999999999999999998
Q ss_pred CCCCCC---------CCCcc-----------c-hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 005240 635 GSYNKT---------LTPFG-----------F-QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 693 (706)
Q Consensus 635 ~~~d~~---------~~~~~-----------~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~ 693 (706)
|..... .+|.. + ..++++++|++.|.++++++|||.+|.+. .+.++.+.+||++
T Consensus 190 G~l~~~~~~~~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~-----~~~l~~~~~fL~~ 264 (285)
T 4fhz_A 190 GRLLAPERLAEEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA-----PDGLSVALAFLKE 264 (285)
T ss_dssp CCCSCHHHHHHHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HHHHHHHHHHHHH
T ss_pred cCccCchhhhhhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-----HHHHHHHHHHHHH
Confidence 854211 11211 1 34589999999999999999999999875 2567889999999
Q ss_pred HhccCC
Q 005240 694 YCLSNT 699 (706)
Q Consensus 694 ~l~~~~ 699 (706)
+|....
T Consensus 265 ~Lpd~~ 270 (285)
T 4fhz_A 265 RLPDAC 270 (285)
T ss_dssp HCC---
T ss_pred HCcCCc
Confidence 986433
No 114
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.56 E-value=1.4e-12 Score=135.39 Aligned_cols=219 Identities=12% Similarity=0.014 Sum_probs=126.0
Q ss_pred ceEEEEcc-CCCc-eec----CCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEE-cccCC
Q 005240 157 AQLVLGSL-DGTA-KDF----GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLP 228 (706)
Q Consensus 157 ~~l~~~~l-~g~~-~~l----t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~~~~ 228 (706)
+.|.++|+ +++. ..+ ... ..+..++|||||++|+..+.+ ..|.+||+.+++... +..+.
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-------------~~i~iwd~~~~~~~~~~~~h~ 169 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-------------ICIKVWDLAQQVVLSSYRAHA 169 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTTEEEEEECCCS
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-------------CeEEEEECCCCcEEEEEcCcC
Confidence 56777788 4532 221 122 578899999999999866543 379999998765433 32221
Q ss_pred CCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-EEe--ecccccccce
Q 005240 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILH--KLDLRFRSVS 305 (706)
Q Consensus 229 ~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~--~~~~~~~~~~ 305 (706)
..+..+.|+|++.. ++.....+ ..|.+||+ .+++.. .+. .....+..+.
T Consensus 170 -------------~~V~~~~~~~~~~~-~l~s~s~D-----------~~v~iwd~---~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 170 -------------AQVTCVAASPHKDS-VFLSCSED-----------NRILLWDT---RCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp -------------SCEEEEEECSSCTT-EEEEEETT-----------SCEEEEET---TSSSCEEECC----CCCEEEEE
T ss_pred -------------CceEEEEecCCCCC-ceeeeccc-----------cccccccc---cccceeeeeecceeeccceeee
Confidence 22457899999987 43332211 24788888 555543 332 2234567889
Q ss_pred ecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEec
Q 005240 306 WCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNG 385 (706)
Q Consensus 306 wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 385 (706)
|+|++..++..... ...|.++|+.+++ ....+...... ...+.|+|||..++++...
T Consensus 222 ~~p~~~~~l~sg~~---dg~v~~wd~~~~~--~~~~~~~h~~~------v~~v~fsp~g~~~lasgs~------------ 278 (344)
T 4gqb_B 222 WHPQQSEVFVFGDE---NGTVSLVDTKSTS--CVLSSAVHSQC------VTGLVFSPHSVPFLASLSE------------ 278 (344)
T ss_dssp ECSSCTTEEEEEET---TSEEEEEESCC----CCEEEECCSSC------EEEEEECSSSSCCEEEEET------------
T ss_pred ecCCCCcceEEecc---CCcEEEEECCCCc--EEEEEcCCCCC------EEEEEEccCCCeEEEEEeC------------
Confidence 99976544433222 2346777887742 22222222111 2237789999654444321
Q ss_pred CCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCC
Q 005240 386 RGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (706)
Q Consensus 386 ~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~ 462 (706)
+ ..+..+|+.+++..++... ......++||||++.++.+.+.+. .|..|++.+.
T Consensus 279 D--------~~i~vwd~~~~~~~~~~~H------------~~~V~~v~~sp~~~~llas~s~D~---~v~~w~v~~~ 332 (344)
T 4gqb_B 279 D--------CSLAVLDSSLSELFRSQAH------------RDFVRDATWSPLNHSLLTTVGWDH---QVVHHVVPTE 332 (344)
T ss_dssp T--------SCEEEECTTCCEEEEECCC------------SSCEEEEEECSSSTTEEEEEETTS---CEEEEECCC-
T ss_pred C--------CeEEEEECCCCcEEEEcCC------------CCCEEEEEEeCCCCeEEEEEcCCC---eEEEEECCCC
Confidence 1 1356678777765443211 112235789999998887766442 4778887553
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.55 E-value=1.7e-12 Score=139.30 Aligned_cols=302 Identities=6% Similarity=-0.039 Sum_probs=180.4
Q ss_pred cccee---eCCCCCeEEEEeeccccc------cccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEE
Q 005240 33 INFVS---WSPDGKRIAFSVRVDEED------NVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIF 103 (706)
Q Consensus 33 ~~~~~---~SPDG~~laf~~~~~~~~------~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~ 103 (706)
....+ |+|+++.++.+....... ...++...||+++.+++..+.+...... ..+..+.|+|+++ +++
T Consensus 63 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~~~~-~~~ 138 (433)
T 3bws_A 63 LVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG---FQPKSVRFIDNTR-LAI 138 (433)
T ss_dssp EEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS---SCBCCCEESSSSE-EEE
T ss_pred cEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC---CCceEEEEeCCCe-EEE
Confidence 34455 999998887665421100 0112234889998877644443221111 1255789999554 555
Q ss_pred EecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCC------C-c
Q 005240 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGT------P-A 175 (706)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~------~-~ 175 (706)
... ....|+++++ +|+..+... . .
T Consensus 139 ~~~------------------------------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 139 PLL------------------------------------------------EDEGMDVLDINSGQTVRLSPPEKYKKKLG 170 (433)
T ss_dssp EBT------------------------------------------------TSSSEEEEETTTCCEEEECCCHHHHTTCC
T ss_pred EeC------------------------------------------------CCCeEEEEECCCCeEeeecCcccccccCC
Confidence 431 1146888898 455544322 2 4
Q ss_pred eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeE-EcccCCCCCCCCcccCccCCCCcceeeecCCC
Q 005240 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (706)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~ 254 (706)
.+..++|+|+|+.++..... ..|.+|++++++.. .+.... ..+..++|+||++
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d-------------~~v~~~d~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~ 224 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA-------------NAVHVFDLKTLAYKATVDLTG-------------KWSKILLYDPIRD 224 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG-------------TEEEEEETTTCCEEEEEECSS-------------SSEEEEEEETTTT
T ss_pred ceeEEEEcCCCEEEEEECCC-------------CEEEEEECCCceEEEEEcCCC-------------CCeeEEEEcCCCC
Confidence 67889999998766544322 47999999865443 333111 1234789999998
Q ss_pred ceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccc----cceEEEEEc
Q 005240 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT----SQTRTWLVC 330 (706)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~----~~~~l~~~d 330 (706)
. |++.... ...|+++|+ .+++..........+..+.|+|||+.|++...... ....|+++|
T Consensus 225 ~-l~~~~~~-----------~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d 289 (433)
T 3bws_A 225 L-VYCSNWI-----------SEDISVIDR---KTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYS 289 (433)
T ss_dssp E-EEEEETT-----------TTEEEEEET---TTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEE
T ss_pred E-EEEEecC-----------CCcEEEEEC---CCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEE
Confidence 6 5544211 125888988 55555444444556788999999998887653221 245799999
Q ss_pred CCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeee
Q 005240 331 PGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (706)
Q Consensus 331 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (706)
+.++ +......... ....+.|+|+|+++++.... ...+..+|+.+++....
T Consensus 290 ~~~~--~~~~~~~~~~-------~~~~~~~~~~g~~l~~~~~~--------------------~~~v~v~d~~~~~~~~~ 340 (433)
T 3bws_A 290 MDKE--KLIDTIGPPG-------NKRHIVSGNTENKIYVSDMC--------------------CSKIEVYDLKEKKVQKS 340 (433)
T ss_dssp TTTT--EEEEEEEEEE-------CEEEEEECSSTTEEEEEETT--------------------TTEEEEEETTTTEEEEE
T ss_pred CCCC--cEEeeccCCC-------CcceEEECCCCCEEEEEecC--------------------CCEEEEEECCCCcEEEE
Confidence 8874 2333221110 11236789999988776421 12466788887766554
Q ss_pred ecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCC-----------cEEEEEECCCCceeEee
Q 005240 411 WESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEI-----------TQYHILSWPLKKSSQIT 468 (706)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p-----------~~v~~~~~~~~~~~~lt 468 (706)
..... ....+.|+|||+.++........+ ..|++||+.+++.....
T Consensus 341 ~~~~~------------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 341 IPVFD------------KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp EECSS------------SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred ecCCC------------CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 43221 122578999998777665443322 48999998887655443
No 116
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.55 E-value=3.5e-12 Score=131.45 Aligned_cols=251 Identities=9% Similarity=0.013 Sum_probs=159.9
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
..|.|+++...........+........+..+.|+|||+.|+.... ...|.++++++++...+......
T Consensus 72 g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~~d~~~~~~~~~~~~~~~- 140 (337)
T 1gxr_A 72 GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE----------ASTLSIWDLAAPTPRIKAELTSS- 140 (337)
T ss_dssp SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES----------SSEEEEEECCCC--EEEEEEECS-
T ss_pred CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC----------CCcEEEEECCCCCcceeeecccC-
Confidence 3578888876222222233321233446889999999999988642 25788888887763322111111
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
...+..+.|+||++.|+.... .+.|.++++
T Consensus 141 -~~~i~~~~~~~~~~~l~~~~~-------------------------------------------------dg~v~~~d~ 170 (337)
T 1gxr_A 141 -APACYALAISPDSKVCFSCCS-------------------------------------------------DGNIAVWDL 170 (337)
T ss_dssp -SSCEEEEEECTTSSEEEEEET-------------------------------------------------TSCEEEEET
T ss_pred -CCceEEEEECCCCCEEEEEeC-------------------------------------------------CCcEEEEeC
Confidence 112678899999998887642 156788888
Q ss_pred -CCC-ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccC
Q 005240 165 -DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (706)
Q Consensus 165 -~g~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~ 241 (706)
+++ ...+... ..+..++|+|||+.|+..... ..|.+|++.+++........
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~------------- 224 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD-------------NTVRSWDLREGRQLQQHDFT------------- 224 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECS-------------
T ss_pred CCCceeeeeecccCceEEEEECCCCCEEEEEecC-------------CcEEEEECCCCceEeeecCC-------------
Confidence 443 3444433 678899999999999866543 37999999876654433321
Q ss_pred CCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccc
Q 005240 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT 321 (706)
Q Consensus 242 ~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~ 321 (706)
..+..+.|+||++. |+... . .+.|+++|+ .+++...+......+..+.|+||++.|+..+.
T Consensus 225 ~~v~~~~~s~~~~~-l~~~~-~-----------~~~i~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--- 285 (337)
T 1gxr_A 225 SQIFSLGYCPTGEW-LAVGM-E-----------SSNVEVLHV---NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGK--- 285 (337)
T ss_dssp SCEEEEEECTTSSE-EEEEE-T-----------TSCEEEEET---TSSCEEEECCCSSCEEEEEECTTSSEEEEEET---
T ss_pred CceEEEEECCCCCE-EEEEc-C-----------CCcEEEEEC---CCCCeEEEcCCccceeEEEECCCCCEEEEecC---
Confidence 12447899999986 55332 1 124788888 56666666667788899999999998887652
Q ss_pred cceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 322 SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 322 ~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
...|.++++.+++ ........ .....+.|+|||++|+...
T Consensus 286 -dg~i~~~~~~~~~--~~~~~~~~-------~~v~~~~~s~~~~~l~~~~ 325 (337)
T 1gxr_A 286 -DNLLNAWRTPYGA--SIFQSKES-------SSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp -TSEEEEEETTTCC--EEEEEECS-------SCEEEEEECTTSCEEEEEE
T ss_pred -CCcEEEEECCCCe--EEEEecCC-------CcEEEEEECCCCCEEEEec
Confidence 2357777877742 22221111 0122467899999887664
No 117
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=2.7e-12 Score=133.55 Aligned_cols=256 Identities=10% Similarity=-0.026 Sum_probs=158.7
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
.|++.|+.. ++..... +.+.....+.|||||++|+++. .....|+++|+++++............
T Consensus 70 ~v~~~d~~~----~~~~~~~--~~~~~~~~~~~s~dg~~l~v~~---------~~~~~v~~~d~~~~~~~~~~~~~~~~~ 134 (353)
T 3vgz_A 70 VVYRLDPVT----LEVTQAI--HNDLKPFGATINNTTQTLWFGN---------TVNSAVTAIDAKTGEVKGRLVLDDRKR 134 (353)
T ss_dssp EEEEECTTT----CCEEEEE--EESSCCCSEEEETTTTEEEEEE---------TTTTEEEEEETTTCCEEEEEESCCCCC
T ss_pred cEEEEcCCC----CeEEEEE--ecCCCcceEEECCCCCEEEEEe---------cCCCEEEEEeCCCCeeEEEEecCCCcc
Confidence 577777765 6554433 2344577899999999987764 334689999999887654332221100
Q ss_pred -----cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEE
Q 005240 86 -----NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (706)
Q Consensus 86 -----~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~ 160 (706)
...+..+.|+|||++|++.... ....|+
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------------------------------------~~~~i~ 167 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIG-----------------------------------------------KESVIW 167 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEES-----------------------------------------------SSCEEE
T ss_pred ccccCCCCCceEEECCCCCEEEEEecC-----------------------------------------------CCceEE
Confidence 0013568999999988876421 115799
Q ss_pred EEcc-CCCce-ecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCccc
Q 005240 161 LGSL-DGTAK-DFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCY 237 (706)
Q Consensus 161 ~~~l-~g~~~-~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~ 237 (706)
++|+ +++.. .+... .....++|+|||++|++.... ..+++||+.+++........... +
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------------~~i~~~d~~~~~~~~~~~~~~~~--~--- 229 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNAD-------------GELITIDTADNKILSRKKLLDDG--K--- 229 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTT-------------SEEEEEETTTTEEEEEEECCCSS--S---
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCC-------------CeEEEEECCCCeEEEEEEcCCCC--C---
Confidence 9998 55443 34422 446789999999999876542 37889999877655433321110 0
Q ss_pred CccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEe
Q 005240 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 317 (706)
Q Consensus 238 ~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~ 317 (706)
......+.|+|||+. |++.. . ....|+++|. .+++......... ...+.|+|||+.+++..
T Consensus 230 ---~~~~~~~~~s~dg~~-l~~~~-~----------~~~~v~~~d~---~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 230 ---EHFFINISLDTARQR-AFITD-S----------KAAEVLVVDT---RNGNILAKVAAPE-SLAVLFNPARNEAYVTH 290 (353)
T ss_dssp ---CCCEEEEEEETTTTE-EEEEE-S----------SSSEEEEEET---TTCCEEEEEECSS-CCCEEEETTTTEEEEEE
T ss_pred ---CcccceEEECCCCCE-EEEEe-C----------CCCEEEEEEC---CCCcEEEEEEcCC-CceEEECCCCCEEEEEE
Confidence 011235799999997 65442 1 1235888888 5666544333322 35689999999877754
Q ss_pred eccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeee
Q 005240 318 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIK 372 (706)
Q Consensus 318 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 372 (706)
. ....|+++|+.++ +......... ....+.|+|||++|++...
T Consensus 291 ~---~~~~v~~~d~~~~--~~~~~~~~~~-------~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 291 R---QAGKVSVIDAKSY--KVVKTFDTPT-------HPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp T---TTTEEEEEETTTT--EEEEEEECCS-------EEEEEEECTTSCEEEEEEE
T ss_pred C---CCCeEEEEECCCC--eEEEEEecCC-------CCCeEEEcCCCCEEEEEEc
Confidence 2 2246889998874 3332222110 1123678999998888753
No 118
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.54 E-value=8.3e-14 Score=142.20 Aligned_cols=190 Identities=17% Similarity=0.170 Sum_probs=126.9
Q ss_pred eEEEEEE---ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEE
Q 005240 482 KEMIKYQ---RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (706)
Q Consensus 482 ~~~~~~~---~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (706)
...++|. ..++..+.+++|.|++..+ +.|+||++||++... ..+ ...+...++++||.|
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~~~----~~p~vv~lHG~~~~~-----------~~~---~~~~~~~l~~~g~~v 85 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGYTP----DRPVVVVQHGVLRNG-----------ADY---RDFWIPAADRHKLLI 85 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTCCT----TSCEEEEECCTTCCH-----------HHH---HHHTHHHHHHHTCEE
T ss_pred CceEEecccCCCCCceEEEEEEeCCCCCC----CCcEEEEeCCCCCCH-----------HHH---HHHHHHHHHHCCcEE
Confidence 4456666 5688899999999986432 369999999975310 011 012356677899999
Q ss_pred EEcCCCCcC---------CC--CCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC-c
Q 005240 559 LAGPSIPII---------GE--GDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-L 626 (706)
Q Consensus 559 ~~~~~~~~~---------g~--g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~-~ 626 (706)
+.+++++.. |+ |.+..........+.|+.++++++.++..+|++||+|+|||+||++++.++.++|+ +
T Consensus 86 ~~~d~~~~~~p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~ 165 (304)
T 3d0k_A 86 VAPTFSDEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAP 165 (304)
T ss_dssp EEEECCTTTSCHHHHTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTT
T ss_pred EEeCCccccCCCccccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCc
Confidence 998876320 22 22211111112234678889999988777899999999999999999999999985 7
Q ss_pred eeEEEecc-CCCCCCC------------------------CCcc--------c---------------------hHHHHH
Q 005240 627 FCCGIARS-GSYNKTL------------------------TPFG--------F---------------------QAERFF 652 (706)
Q Consensus 627 ~~a~v~~~-~~~d~~~------------------------~~~~--------~---------------------~~~~~~ 652 (706)
++++|+.. |.++... .|.. . ...+++
T Consensus 166 ~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 245 (304)
T 3d0k_A 166 FHAVTAANPGWYTLPTFEHRFPEGLDGVGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARARHYY 245 (304)
T ss_dssp CSEEEEESCSSCCCSSTTSBTTTSSBTTTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHHHHHH
T ss_pred eEEEEEecCcccccCCccccCccccCCCCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHHHHHH
Confidence 88877554 5432110 0100 0 012456
Q ss_pred HHHH----hCCCc--EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHh
Q 005240 653 DALK----GHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 695 (706)
Q Consensus 653 ~~l~----~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l 695 (706)
++++ +.+++ +++++|||++|.+. .....+.+||....
T Consensus 246 ~~l~~~a~~~g~~~~~~~~~~pg~gH~~~------~~~~~~~~~~~~~~ 288 (304)
T 3d0k_A 246 EAGQRAAAQRGLPFGWQLQVVPGIGHDGQ------AMSQVCASLWFDGR 288 (304)
T ss_dssp HHHHHHHHHHTCCCCCEEEEETTCCSCHH------HHHHHHHHHHHTSS
T ss_pred HHHHHHHHhcCCCcceEEEEeCCCCCchH------HHHHHHHHHHhhhh
Confidence 6665 66777 99999999999873 45677888887644
No 119
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.54 E-value=8.5e-13 Score=142.08 Aligned_cols=303 Identities=10% Similarity=0.087 Sum_probs=167.7
Q ss_pred CcccceeeCC-CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEec-CCcEEEEEecCC
Q 005240 31 AKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSS 108 (706)
Q Consensus 31 ~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSp-Dg~~l~~~~~~~ 108 (706)
..+..++||| +++.||.... + ..|.++|+++++...+....++ ...+..+.|+| |+++|+..+.+
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~--------d--g~i~lWd~~~~~~~~~~~~~gH--~~~V~~l~f~p~~~~~l~s~s~D- 186 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSK--------G--GDIMLWNFGIKDKPTFIKGIGA--GGSITGLKFNPLNTNQFYASSME- 186 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEET--------T--SCEEEECSSCCSCCEEECCCSS--SCCCCEEEECSSCTTEEEEECSS-
T ss_pred CCEEEEEEeCCCCCEEEEEeC--------C--CEEEEEECCCCCceeEEEccCC--CCCEEEEEEeCCCCCEEEEEeCC-
Confidence 3588899999 5566766532 3 4677778877664443322111 12378999998 78877765321
Q ss_pred CCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecCCC----ceEeeeeeC
Q 005240 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP----AVYTAVEPS 183 (706)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt~~----~~~~~~~~S 183 (706)
+.|.++|+.+ ..+.+... ..+..++|+
T Consensus 187 ------------------------------------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (435)
T 4e54_B 187 ------------------------------------------------GTTRLQDFKGNILRVFASSDTINIWFCSLDVS 218 (435)
T ss_dssp ------------------------------------------------SCEEEEETTSCEEEEEECCSSCSCCCCCEEEE
T ss_pred ------------------------------------------------CEEEEeeccCCceeEEeccCCCCccEEEEEEC
Confidence 4566678855 33333222 245678999
Q ss_pred CCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEec
Q 005240 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~ 263 (706)
|||+.|+..... ..|.+||++++.+..+..+. ..+..+.|+|+++. ++.....
T Consensus 219 ~~~~~l~~g~~d-------------g~i~~wd~~~~~~~~~~~h~-------------~~v~~v~~~p~~~~-~~~s~s~ 271 (435)
T 4e54_B 219 ASSRMVVTGDNV-------------GNVILLNMDGKELWNLRMHK-------------KKVTHVALNPCCDW-FLATASV 271 (435)
T ss_dssp TTTTEEEEECSS-------------SBEEEEESSSCBCCCSBCCS-------------SCEEEEEECTTCSS-EEEEEET
T ss_pred CCCCEEEEEeCC-------------CcEeeeccCcceeEEEeccc-------------ceEEeeeecCCCce-EEEEecC
Confidence 999998765543 37999999877655443221 22457899999987 4433222
Q ss_pred cCCCCccccCccceeeeecCCCCCCCC-ceEE---eecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCce
Q 005240 264 DRGDANVEVSPRDIIYTQPAEPAEGEK-PEIL---HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (706)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~l---~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 339 (706)
+ ..|.+||+ ...+ ...+ ..+...+..+.|+|||+.|+..+.+ + .|.++|+.+++ .+.
T Consensus 272 d-----------~~v~iwd~---~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D--~--~i~iwd~~~~~-~~~ 332 (435)
T 4e54_B 272 D-----------QTVKIWDL---RQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQK--S--EIRVYSASQWD-CPL 332 (435)
T ss_dssp T-----------SBCCEEET---TTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESS--S--CEEEEESSSSS-SEE
T ss_pred c-----------ceeeEEec---ccccccceEEEeeeccccccceeECCCCCeeEEEcCC--C--EEEEEECCCCc-cce
Confidence 1 23667777 3222 2222 2345678889999999998876522 2 35666666642 222
Q ss_pred eeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhh
Q 005240 340 VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYF 419 (706)
Q Consensus 340 ~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 419 (706)
.+...... .......+...|+|++..++.....+ +..+... + .+...|..+|..+|+..........
T Consensus 333 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~--~----~~~~~i~iwd~~~g~~~~~l~~~~~--- 399 (435)
T 4e54_B 333 GLIPHPHR-HFQHLTPIKAAWHPRYNLIVVGRYPD---PNFKSCT--P----YELRTIDVFDGNSGKMMCQLYDPES--- 399 (435)
T ss_dssp EECCCCCC-CCSSSCCCBCEECSSSSCEEEECCCC---TTSCCSS--T----TCCCCEEEECSSSCCEEEEECCSSC---
T ss_pred EEeccccc-ccccceeEEEEEcCCCCEEEEEEcCC---CCeEEEE--e----cCCCEEEEEECCCCcEEEEEeCCCC---
Confidence 22111100 00001123356788888776654221 1111100 0 1122466678877765433222110
Q ss_pred hhhhhhccCCCc-eecccCCCEEEEEEecCCCCcEEEEEECCCCcee
Q 005240 420 ETAVALVFGQGE-EDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (706)
Q Consensus 420 ~~~~~~~~~~~~-~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~ 465 (706)
..... ..|||||+.|+. .++ ..|.+|++++++.+
T Consensus 400 -------~~v~s~~~fspdg~~las-g~d----~~i~iW~~~~gk~r 434 (435)
T 4e54_B 400 -------SGISSLNEFNPMGDTLAS-AMG----YHILIWSQQEARTR 434 (435)
T ss_dssp -------CCCCCEEEECTTSSCEEE-ECS----SEEEECCCC-----
T ss_pred -------CcEEEEEEECCCCCEEEE-EcC----CcEEEEECCcCeee
Confidence 11122 369999987663 333 25999999888754
No 120
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.54 E-value=3.3e-12 Score=131.41 Aligned_cols=244 Identities=13% Similarity=0.075 Sum_probs=153.3
Q ss_pred ceeEeecCCCCCCCCeeeeecCCC-CCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeec-ccCCCc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL-FESPDI 83 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-t~~~~~ 83 (706)
.|.|.++.. ++......+.. ...+..+.|+|++..++..+. ...|.++|+.+++.... .....
T Consensus 59 ~v~vW~~~~----~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~----------D~~i~lWd~~~~~~~~~~~~~~~- 123 (321)
T 3ow8_A 59 LVKVWKWRD----ERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL----------DAHIRLWDLENGKQIKSIDAGPV- 123 (321)
T ss_dssp CEEEEEEET----TEEEEEEEECCCSSCEEEEEECSSSSEEEEEET----------TSEEEEEETTTTEEEEEEECCTT-
T ss_pred CEEEEECCC----CCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC----------CCcEEEEECCCCCEEEEEeCCCc-
Confidence 467777755 43322211222 225788999999998877542 35788889888765443 22222
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
.+..+.|+|||++|+.... .+.+.+++
T Consensus 124 ----~~~~~~~spdg~~l~~g~~-------------------------------------------------dg~v~i~~ 150 (321)
T 3ow8_A 124 ----DAWTLAFSPDSQYLATGTH-------------------------------------------------VGKVNIFG 150 (321)
T ss_dssp ----CCCCEEECTTSSEEEEECT-------------------------------------------------TSEEEEEE
T ss_pred ----cEEEEEECCCCCEEEEEcC-------------------------------------------------CCcEEEEE
Confidence 2567899999999887632 15677778
Q ss_pred c-CCC-ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeE-EcccCCCCCCCCcccCc
Q 005240 164 L-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNS 239 (706)
Q Consensus 164 l-~g~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~~p~~~~~ 239 (706)
+ +++ ...+... ..+..++|+|||++|+..+.. ..|.+||+.+++.. .+....
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~d-------------g~i~iwd~~~~~~~~~~~~h~----------- 206 (321)
T 3ow8_A 151 VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID-------------GIINIFDIATGKLLHTLEGHA----------- 206 (321)
T ss_dssp TTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTTEEEEEECCCS-----------
T ss_pred cCCCceeEEecCCCceEEEEEECCCCCEEEEEcCC-------------CeEEEEECCCCcEEEEEcccC-----------
Confidence 7 443 3333333 568899999999999876544 37999999866543 332221
Q ss_pred cCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEeecccccccceecCCCceEEEEee
Q 005240 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETW 318 (706)
Q Consensus 240 ~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~ 318 (706)
..+..+.|+||++. |+.. .. ...|.+||+ ..++. ..+......+..+.|+||++.|+..+.
T Consensus 207 --~~v~~l~~spd~~~-l~s~-s~-----------dg~i~iwd~---~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 268 (321)
T 3ow8_A 207 --MPIRSLTFSPDSQL-LVTA-SD-----------DGYIKIYDV---QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 268 (321)
T ss_dssp --SCCCEEEECTTSCE-EEEE-CT-----------TSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred --CceeEEEEcCCCCE-EEEE-cC-----------CCeEEEEEC---CCcceeEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 12457899999985 5422 11 124788888 44443 345556777889999999998887653
Q ss_pred ccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 319 YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 319 ~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
+ + .|.++|+.++ +....+..... ....+.|+|||++|+...
T Consensus 269 D--~--~v~iwd~~~~--~~~~~~~~h~~------~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 269 D--K--SVKVWDVGTR--TCVHTFFDHQD------QVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp T--S--CEEEEETTTT--EEEEEECCCSS------CEEEEEECTTSSEEEEEE
T ss_pred C--C--cEEEEeCCCC--EEEEEEcCCCC------cEEEEEECCCCCEEEEEe
Confidence 2 3 3556666663 22222221111 122477899999887654
No 121
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.54 E-value=1.6e-14 Score=145.18 Aligned_cols=195 Identities=12% Similarity=0.036 Sum_probs=125.2
Q ss_pred CCCceEEEEEEcc-CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHH-HHCC
Q 005240 478 ASLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF-LARR 555 (706)
Q Consensus 478 ~~~~~~~~~~~~~-dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~G 555 (706)
.....+.+++.+. +|.++..++|+|+++++++ ++|+|+++||++... .. ..+ ......+ ++.|
T Consensus 14 ~~~~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~Pvl~~lhG~~~~~-----~~----~~~----~~~~~~~~~~~g 78 (275)
T 2qm0_A 14 ITSNTEQWKMYSKLEGKEYQIHISKPKQPAPDS--GYPVIYVLDGNAFFQ-----TF----HEA----VKIQSVRAEKTG 78 (275)
T ss_dssp CCTTEEEEEEECTTTCCEEEEEEECCSSCCCTT--CEEEEEEESHHHHHH-----HH----HHH----HHHHGGGHHHHC
T ss_pred ecCCceEEEEEecCCCCEEEEEEECCCCCCCCC--CccEEEEecChHHHH-----HH----HHH----HHHHhhcchhcC
Confidence 3457788999986 7899999999999987654 599999999974200 00 000 0011112 3467
Q ss_pred ---eEEEEcCCCCcC---------CCCCC-----CC---------chhhHHHHHHHH-HHHHHHHHHcCCCCCCcEEEEE
Q 005240 556 ---FAVLAGPSIPII---------GEGDK-----LP---------NDRFVEQLVSSA-EAAVEEVVRRGVADPSRIAVGG 608 (706)
Q Consensus 556 ---~~v~~~~~~~~~---------g~g~~-----~~---------~~~~~~~~~~D~-~~~~~~l~~~~~id~~~i~i~G 608 (706)
++|+.+++++.. .++.. +. .........+-+ ..++.++.++..+|+++++|+|
T Consensus 79 ~~~~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G 158 (275)
T 2qm0_A 79 VSPAIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFG 158 (275)
T ss_dssp CCCCEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEE
T ss_pred CCCeEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEE
Confidence 999886665421 11111 00 000001112112 1345566666558999999999
Q ss_pred echHHHHHHHHHHhCCCceeEEEeccCCCCCCC---------------C-----Ccc------------chHHHHHHHH-
Q 005240 609 HSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL---------------T-----PFG------------FQAERFFDAL- 655 (706)
Q Consensus 609 ~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~---------------~-----~~~------------~~~~~~~~~l- 655 (706)
+||||++|++++.++|++|+++++.+|.+.+.. . |.. -+.++|+++|
T Consensus 159 ~S~GG~~a~~~~~~~p~~f~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~ 238 (275)
T 2qm0_A 159 HXLGGLFALHILFTNLNAFQNYFISSPSIWWNNKSVLEKEENLIIELNNAKFETGVFLTVGSLEREHMVVGANELSERLL 238 (275)
T ss_dssp ETHHHHHHHHHHHHCGGGCSEEEEESCCTTHHHHGGGGGTTHHHHHHHTCSSCEEEEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred ecchhHHHHHHHHhCchhhceeEEeCceeeeChHHHHHHHHHHHhhhcccCCCceEEEEeCCcccchhhHHHHHHHHHHH
Confidence 999999999999999999999999999864210 0 000 0234899999
Q ss_pred --HhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHH
Q 005240 656 --KGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWL 691 (706)
Q Consensus 656 --~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~ 691 (706)
+..|+++++.+|||++|+.. +...+...++||
T Consensus 239 ~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 239 QVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp HCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred hcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 56788999999999999643 233445555665
No 122
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.53 E-value=8e-13 Score=140.98 Aligned_cols=299 Identities=9% Similarity=0.116 Sum_probs=167.4
Q ss_pred cccceeeCCCCCeEEEEeecccc-ccccCCceeEEEEEcCCCcee-ecccCCCccccccccceEEecCCcEEEEEecCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEE-DNVSSCKLRVWIADAETGEAK-PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~-~~~~~~~~~l~~~d~~~g~~~-~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~ 109 (706)
.+..++|||||+.++++...... .........|.++++.+++.. .+..... ...+..+.|+|||++|+....+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d-- 88 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQV---DSKFNDLDWSHNNKIIAGALDN-- 88 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCC---SSCEEEEEECSSSSCEEEEESS--
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEec---CCceEEEEECCCCCeEEEEccC--
Confidence 57789999999955555421100 000012356778888876532 2211111 1237789999999988876421
Q ss_pred CCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC------CceecCCC-ceEeeeee
Q 005240 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG------TAKDFGTP-AVYTAVEP 182 (706)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g------~~~~lt~~-~~~~~~~~ 182 (706)
+.|.++++.. ....+... ..+..++|
T Consensus 89 -----------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 89 -----------------------------------------------GSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp -----------------------------------------------SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred -----------------------------------------------CeEEEeecccccccccchhhccCCccceEEEEE
Confidence 4566667632 22334333 67889999
Q ss_pred CCC-CcEEEEEeeccCcccccccccccceEEEEecCCCe-------eEEcccCCCCCCCCcccCccCCCCcceeeecCCC
Q 005240 183 SPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-------VRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (706)
Q Consensus 183 SpD-G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~ 254 (706)
+|| ++.|+..+.. ..|.+|++.+++ ...+...... ...+..+.|+|++.
T Consensus 122 ~~~~~~~l~s~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~ 178 (416)
T 2pm9_A 122 NAKQDNVLASGGNN-------------GEIFIWDMNKCTESPSNYTPLTPGQSMSS----------VDEVISLAWNQSLA 178 (416)
T ss_dssp CSSSTTBEEEECSS-------------SCEEBCBTTTTSSCTTTCCCBCCCCSCCS----------SCCCCEEEECSSCT
T ss_pred cCCCCCEEEEEcCC-------------CeEEEEECCCCccccccccccccccccCC----------CCCeeEEEeCCCCC
Confidence 999 6666544432 379999998654 1111111110 12245889999965
Q ss_pred ceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceE-Eeec------ccccccceecCCCc-eEEEEeeccccceEE
Q 005240 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKL------DLRFRSVSWCDDSL-ALVNETWYKTSQTRT 326 (706)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~-l~~~------~~~~~~~~wspDg~-~l~~~~~~~~~~~~l 326 (706)
. +++.... ...|.+||+ .+++... +... ...+..+.|+|++. .|+... .......|
T Consensus 179 ~-~l~~~~~-----------dg~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~~~i 242 (416)
T 2pm9_A 179 H-VFASAGS-----------SNFASIWDL---KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT-GSDNDPSI 242 (416)
T ss_dssp T-EEEEESS-----------SSCEEEEET---TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEE-CCSSSCCC
T ss_pred c-EEEEEcC-----------CCCEEEEEC---CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEE-CCCCCceE
Confidence 5 3333211 124788888 4444333 3322 56688899999985 444443 32222246
Q ss_pred EEEcCCCCCCCceeeec-CcccccccCCCCCceEecc-CCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCC
Q 005240 327 WLVCPGSKDVAPRVLFD-RVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT 404 (706)
Q Consensus 327 ~~~d~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~ 404 (706)
.++|+.++. .+...+. .... ....+.|+| ++++|+..... ..+..+|+.+
T Consensus 243 ~~~d~~~~~-~~~~~~~~~~~~------~v~~~~~s~~~~~~l~s~~~d---------------------g~v~~wd~~~ 294 (416)
T 2pm9_A 243 LIWDLRNAN-TPLQTLNQGHQK------GILSLDWCHQDEHLLLSSGRD---------------------NTVLLWNPES 294 (416)
T ss_dssp CEEETTSTT-SCSBCCCSCCSS------CEEEEEECSSCSSCEEEEESS---------------------SEEEEECSSS
T ss_pred EEEeCCCCC-CCcEEeecCccC------ceeEEEeCCCCCCeEEEEeCC---------------------CCEEEeeCCC
Confidence 777777642 2222222 1111 123477899 88877765421 1356677777
Q ss_pred CceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCc
Q 005240 405 GSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (706)
Q Consensus 405 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~ 463 (706)
++....+.... .....+.|+||+..++++.+.. ..|.+|++.+++
T Consensus 295 ~~~~~~~~~~~-----------~~v~~~~~s~~~~~~l~s~~~d---~~i~iw~~~~~~ 339 (416)
T 2pm9_A 295 AEQLSQFPARG-----------NWCFKTKFAPEAPDLFACASFD---NKIEVQTLQNLT 339 (416)
T ss_dssp CCEEEEEECSS-----------SCCCCEEECTTCTTEEEECCSS---SEEEEEESCCCC
T ss_pred CccceeecCCC-----------CceEEEEECCCCCCEEEEEecC---CcEEEEEccCCC
Confidence 76544333221 1233578999995455544433 458899987654
No 123
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.53 E-value=2.8e-13 Score=129.95 Aligned_cols=159 Identities=13% Similarity=0.074 Sum_probs=111.5
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCC----------cCCCCCCCC---chhhH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP----------IIGEGDKLP---NDRFV 579 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~----------~~g~g~~~~---~~~~~ 579 (706)
.| ||++||.+.. ... ...++..|+ .||.|+.++... ..|+|.... .....
T Consensus 17 ~p-vv~lHG~g~~-----------~~~----~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~ 79 (209)
T 3og9_A 17 AP-LLLLHSTGGD-----------EHQ----LVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESL 79 (209)
T ss_dssp CC-EEEECCTTCC-----------TTT----THHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHH
T ss_pred CC-EEEEeCCCCC-----------HHH----HHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHH
Confidence 68 9999996321 011 113344454 788888766321 112222111 12234
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC--------CCcc------
Q 005240 580 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--------TPFG------ 645 (706)
Q Consensus 580 ~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~--------~~~~------ 645 (706)
.....++.+.++.+.++..+|+++++|+|+|+||++++.++.++|++++++++.+|...... .|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~p~li~~G~~ 159 (209)
T 3og9_A 80 DEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFEQTVQLDDKHVFLSYAPN 159 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCCCCCCCTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcccccccccCCCEEEEcCCC
Confidence 45677777888888776668999999999999999999999999999999999998765321 1111
Q ss_pred ------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHH
Q 005240 646 ------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 694 (706)
Q Consensus 646 ------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~ 694 (706)
-..+++++.|+..+.++++.+|+ .+|.+. .+..+.+.+||+++
T Consensus 160 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~-----~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 160 DMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLT-----QEEVLAAKKWLTET 208 (209)
T ss_dssp CSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCC-----HHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCC-----HHHHHHHHHHHHhh
Confidence 13458999999999999999998 699985 35678899999874
No 124
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.53 E-value=2.9e-13 Score=132.64 Aligned_cols=115 Identities=21% Similarity=0.206 Sum_probs=91.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC------------CC-c
Q 005240 578 FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL------------TP-F 644 (706)
Q Consensus 578 ~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~------------~~-~ 644 (706)
......+++...++.+.+. .+|.++++|+|+|+||++++.++.++|++|+++++.+|..+... .| .
T Consensus 95 ~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pp~ 173 (239)
T 3u0v_A 95 SIDVMCQVLTDLIDEEVKS-GIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPEL 173 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHHHHHHHCCSCCCCE
T ss_pred hHHHHHHHHHHHHHHHHHh-CCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHHHHHHhhccCCCCE
Confidence 4555667777777766653 37889999999999999999999999999999999999865331 22 2
Q ss_pred cc------------hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhccC
Q 005240 645 GF------------QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 698 (706)
Q Consensus 645 ~~------------~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~~ 698 (706)
.. ..+++++.|++.+.++++++||+++|.+. .+..+.+.+||+++|...
T Consensus 174 li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~~ 234 (239)
T 3u0v_A 174 FQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS-----KTELDILKLWILTKLPGE 234 (239)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC-----HHHHHHHHHHHHHHCC--
T ss_pred EEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC-----HHHHHHHHHHHHHhCCCc
Confidence 11 23489999999999999999999999986 366889999999998653
No 125
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.53 E-value=3.1e-13 Score=137.77 Aligned_cols=196 Identities=15% Similarity=0.035 Sum_probs=128.2
Q ss_pred CceEEEEEEcc-CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEE
Q 005240 480 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAV 558 (706)
Q Consensus 480 ~~~~~~~~~~~-dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v 558 (706)
.+.+.+++.+. .+.++..+ +.| .. + ++|+||++||++... ....|... ....+.+++.||+|
T Consensus 7 ~~v~~~~~~S~~~~~~i~v~-~~p-~~---~--~~p~vvllHG~~~~~------~~~~w~~~----~~~~~~~~~~~~~v 69 (304)
T 1sfr_A 7 LPVEYLQVPSPSMGRDIKVQ-FQS-GG---A--NSPALYLLDGLRAQD------DFSGWDIN----TPAFEWYDQSGLSV 69 (304)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EEC-CS---T--TBCEEEEECCTTCCS------SSCHHHHH----CCHHHHHTTSSCEE
T ss_pred ceEEEEEEECccCCCceEEE-ECC-CC---C--CCCEEEEeCCCCCCC------CcchhhcC----CCHHHHHhcCCeEE
Confidence 35567777765 46778877 444 32 2 489999999974210 00011100 01235566789999
Q ss_pred EEcCCCCcCCCCCCCC---------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeE
Q 005240 559 LAGPSIPIIGEGDKLP---------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (706)
Q Consensus 559 ~~~~~~~~~g~g~~~~---------~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a 629 (706)
++++.+++.+|..... ...+.....+|+.. ++.++..+++++++|+|+||||++|+.++.++|++|++
T Consensus 70 v~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~---~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~ 146 (304)
T 1sfr_A 70 VMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPG---WLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVY 146 (304)
T ss_dssp EEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHH---HHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEE
T ss_pred EEECCCCCccccccCCccccccccccccHHHHHHHHHHH---HHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeE
Confidence 9988765434321111 11222222344444 34343347888999999999999999999999999999
Q ss_pred EEeccCCCCCCC-----------------------------------------------CCc-------cc---------
Q 005240 630 GIARSGSYNKTL-----------------------------------------------TPF-------GF--------- 646 (706)
Q Consensus 630 ~v~~~~~~d~~~-----------------------------------------------~~~-------~~--------- 646 (706)
+++++|.++... .|. ..
T Consensus 147 ~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~ 226 (304)
T 1sfr_A 147 AGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLP 226 (304)
T ss_dssp EEEESCCSCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHH
T ss_pred EEEECCccCccccchhhhhhHhhhhccccchHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccc
Confidence 999999765321 010 00
Q ss_pred ----------hHHHHHHHHHhCC-CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhccC
Q 005240 647 ----------QAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSN 698 (706)
Q Consensus 647 ----------~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~~ 698 (706)
+.++++++|+++| +++++.+|++++|.+. .+...+..++.||.++|...
T Consensus 227 ~~~~e~~~~~~~~~~~~~L~~~G~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~~~ 286 (304)
T 1sfr_A 227 AKFLEGFVRTSNIKFQDAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALGAT 286 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHTCC
T ss_pred cchhHHHHHHHHHHHHHHHHhCCCCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhcCCC
Confidence 1238999999999 9999999987799864 24566788999999998743
No 126
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.53 E-value=1e-13 Score=135.09 Aligned_cols=173 Identities=11% Similarity=0.060 Sum_probs=121.5
Q ss_pred EEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCC-------------
Q 005240 499 LYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP------------- 565 (706)
Q Consensus 499 l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~------------- 565 (706)
++.|+. +.+.|+||++||.+.. ...+ ......|++.||.|+.++..+
T Consensus 14 ~~~p~~-----~~~~~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 73 (232)
T 1fj2_A 14 AIVPAA-----RKATAAVIFLHGLGDT-----------GHGW----AEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPS 73 (232)
T ss_dssp EEECCS-----SCCSEEEEEECCSSSC-----------HHHH----HHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEEC
T ss_pred cccCCC-----CCCCceEEEEecCCCc-----------cchH----HHHHHHHhcCCcEEEecCCCcccccccccccccc
Confidence 566764 1247999999996421 0011 123344555799999864321
Q ss_pred ---cCCCCCCCC-chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC
Q 005240 566 ---IIGEGDKLP-NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL 641 (706)
Q Consensus 566 ---~~g~g~~~~-~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~ 641 (706)
.+|+..... .........+|+.++++++.+ ..+|+++++++|+|+||++++.++.++|++++++++.+|..+...
T Consensus 74 w~d~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~ 152 (232)
T 1fj2_A 74 WFDIIGLSPDSQEDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRA 152 (232)
T ss_dssp SSCBCCCSTTCCBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGG
T ss_pred ccccccCCcccccccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCc
Confidence 223311111 233456678889999998877 557889999999999999999999999999999999999765321
Q ss_pred -------------CCcc---------c---hHHHHHHHHHhCCCc--EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHH
Q 005240 642 -------------TPFG---------F---QAERFFDALKGHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 694 (706)
Q Consensus 642 -------------~~~~---------~---~~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~ 694 (706)
.|.. . ..+++++.|+..+.+ ++++++++++|.+. .+..+.+.+||+++
T Consensus 153 ~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~-----~~~~~~i~~~l~~~ 227 (232)
T 1fj2_A 153 SFPQGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSC-----QQEMMDVKQFIDKL 227 (232)
T ss_dssp GSCSSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCC-----HHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccC-----HHHHHHHHHHHHHh
Confidence 1110 0 234788899888865 99999999999883 34568999999999
Q ss_pred hcc
Q 005240 695 CLS 697 (706)
Q Consensus 695 l~~ 697 (706)
|..
T Consensus 228 l~~ 230 (232)
T 1fj2_A 228 LPP 230 (232)
T ss_dssp SCC
T ss_pred cCC
Confidence 864
No 127
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.53 E-value=4.7e-14 Score=149.53 Aligned_cols=150 Identities=12% Similarity=0.048 Sum_probs=106.6
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCccc--CC----CC-CcCCCCchHHHH
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVR--GS----PN-EFSGMTPTSSLI 550 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~--~~----~~-~~~~~~~~~~~~ 550 (706)
..++.+.+++.+.+|..++++++.|++. .+|+|+||++||++... . ... .+ +. .+......+++.
T Consensus 88 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vv~~HG~g~~~---~-~~~~~~g~~~~~~~~y~~~~~~~a~~ 159 (398)
T 3nuz_A 88 EGYRLEKWEFYPLPKCVSTFLVLIPDNI----NKPVPAILCIPGSGGNK---E-GLAGEPGIAPKLNDRYKDPKLTQALN 159 (398)
T ss_dssp SSEEEEEEEECCSTTBCEEEEEEEESSC----CSCEEEEEEECCTTCCH---H-HHHTCCCSSSTTCCSTTCTTTCHHHH
T ss_pred CCEEEEEEEEEcCCCcEEEEEEEeCCCC----CCCccEEEEEcCCCCCc---c-cccccccccccccccccchHHHHHHH
Confidence 4467889999999999999999999863 23589999999974310 0 000 00 00 000000146788
Q ss_pred HHHCCeEEEEcCCCCcCCCCCCC-------------------CchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEech
Q 005240 551 FLARRFAVLAGPSIPIIGEGDKL-------------------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSY 611 (706)
Q Consensus 551 l~~~G~~v~~~~~~~~~g~g~~~-------------------~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~ 611 (706)
|+++||+|+.++.+|....+... ....+....+.|+.++++||.+++.+|++||+|+|+||
T Consensus 160 la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~ 239 (398)
T 3nuz_A 160 FVKEGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSL 239 (398)
T ss_dssp HHTTTCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGG
T ss_pred HHHCCCEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECH
Confidence 99999999998877543222111 01123334568999999999999889999999999999
Q ss_pred HHHHHHHHHHhCCCceeEEEeccCC
Q 005240 612 GAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 612 GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
||++|+++++.. ++++|+|+.+++
T Consensus 240 GG~~a~~~aa~~-~~i~a~v~~~~~ 263 (398)
T 3nuz_A 240 GTEPMMVLGTLD-TSIYAFVYNDFL 263 (398)
T ss_dssp GHHHHHHHHHHC-TTCCEEEEESCB
T ss_pred hHHHHHHHHhcC-CcEEEEEEeccc
Confidence 999999999987 688888886554
No 128
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.53 E-value=6.6e-12 Score=141.36 Aligned_cols=218 Identities=10% Similarity=0.041 Sum_probs=134.3
Q ss_pred cceeEeecCCCCCCCC-eeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceee---cccC
Q 005240 5 TGIGIHRLLPDDSLGP-EKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP---LFES 80 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~---lt~~ 80 (706)
..|.|.++.. ++ .+.+++... .+..++|||||++||.... + ..|.++|+.+++... +..+
T Consensus 39 ~~v~l~~~~~----~~~~~~~~~h~~--~v~~~~~spdg~~lasg~~--------d--~~v~lWd~~~~~~~~~~~~~~~ 102 (611)
T 1nr0_A 39 TSVYTVPVGS----LTDTEIYTEHSH--QTTVAKTSPSGYYCASGDV--------H--GNVRIWDTTQTTHILKTTIPVF 102 (611)
T ss_dssp TEEEEEETTC----SSCCEEECCCSS--CEEEEEECTTSSEEEEEET--------T--SEEEEEESSSTTCCEEEEEECS
T ss_pred CEEEEecCCC----cccCeEecCCCC--ceEEEEECCCCcEEEEEeC--------C--CCEEEeECCCCcceeeEeeccc
Confidence 3578888865 43 333443222 4888999999999988653 2 467777876544322 2222
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEE
Q 005240 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (706)
Q Consensus 81 ~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~ 160 (706)
.. .+..++|||||++|+...... . ....++
T Consensus 103 ~~-----~v~~v~fs~dg~~l~~~~~~~-~--------------------------------------------~~~~v~ 132 (611)
T 1nr0_A 103 SG-----PVKDISWDSESKRIAAVGEGR-E--------------------------------------------RFGHVF 132 (611)
T ss_dssp SS-----CEEEEEECTTSCEEEEEECCS-S--------------------------------------------CSEEEE
T ss_pred CC-----ceEEEEECCCCCEEEEEECCC-C--------------------------------------------ceeEEE
Confidence 22 378999999999988764311 0 114677
Q ss_pred EEccCCCceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeE-EcccCCCCCCCCcccC
Q 005240 161 LGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYN 238 (706)
Q Consensus 161 ~~~l~g~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~~p~~~~ 238 (706)
+++.......+... ..+..++|+||++.++++.... ..+.+|+....+.. .+..+.
T Consensus 133 ~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D------------~~v~lwd~~~~~~~~~l~~H~---------- 190 (611)
T 1nr0_A 133 LFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD------------NTVAIFEGPPFKFKSTFGEHT---------- 190 (611)
T ss_dssp ETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETT------------SCEEEEETTTBEEEEEECCCS----------
T ss_pred EeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCC------------CeEEEEECCCCeEeeeecccc----------
Confidence 77742233344444 6788999999998644444332 37899998765443 332221
Q ss_pred ccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceE-Ee-------ecccccccceecCCC
Q 005240 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LH-------KLDLRFRSVSWCDDS 310 (706)
Q Consensus 239 ~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~-l~-------~~~~~~~~~~wspDg 310 (706)
..+..++|+|||+. |+-.. .+ ..|.+||+ .+++... +. .+...+..+.|+|||
T Consensus 191 ---~~V~~v~fspdg~~-las~s-~D-----------~~i~lwd~---~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 191 ---KFVHSVRYNPDGSL-FASTG-GD-----------GTIVLYNG---VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp ---SCEEEEEECTTSSE-EEEEE-TT-----------SCEEEEET---TTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred ---CceEEEEECCCCCE-EEEEE-CC-----------CcEEEEEC---CCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 22557899999986 54221 11 24778887 4444333 32 356678889999999
Q ss_pred ceEEEEeeccccceEEEEEcCCC
Q 005240 311 LALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 311 ~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
+.|+..+.+ + .|.++|+.+
T Consensus 252 ~~l~s~s~D--~--~v~lWd~~~ 270 (611)
T 1nr0_A 252 TKIASASAD--K--TIKIWNVAT 270 (611)
T ss_dssp SEEEEEETT--S--EEEEEETTT
T ss_pred CEEEEEeCC--C--eEEEEeCCC
Confidence 998876532 2 355556555
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.53 E-value=4.9e-12 Score=130.78 Aligned_cols=224 Identities=10% Similarity=0.031 Sum_probs=119.3
Q ss_pred ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCe-eEEcccCCCCCCCCcccCccCCCCcceeeecCC
Q 005240 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (706)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg 253 (706)
..+..++|||||++|++..... ..|.+|+++.+. .+.+...... ..+..+.|+|||
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~------------~~i~~~d~~~~~~~~~~~~~~~~-----------~~~~~~~~s~dg 140 (343)
T 1ri6_A 84 GSLTHISTDHQGQFVFVGSYNA------------GNVSVTRLEDGLPVGVVDVVEGL-----------DGCHSANISPDN 140 (343)
T ss_dssp SCCSEEEECTTSSEEEEEETTT------------TEEEEEEEETTEEEEEEEEECCC-----------TTBCCCEECTTS
T ss_pred CCCcEEEEcCCCCEEEEEecCC------------CeEEEEECCCCccccccccccCC-----------CCceEEEECCCC
Confidence 4567889999999998776532 368899884221 1111111111 123467999999
Q ss_pred CceEEEEEeccCCCCccccCccceeeeecCCCCCC-CCceEEe-----e-cccccccceecCCCceEEEEeeccccceEE
Q 005240 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EKPEILH-----K-LDLRFRSVSWCDDSLALVNETWYKTSQTRT 326 (706)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~l~-----~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~l 326 (706)
+. |+..... .+.|+++++ .. ++...+. . .......+.|+|||+.|++... ..+ .|
T Consensus 141 ~~-l~~~~~~-----------~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~-~~~--~i 202 (343)
T 1ri6_A 141 RT-LWVPALK-----------QDRICLFTV---SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE-LNS--SV 202 (343)
T ss_dssp SE-EEEEEGG-----------GTEEEEEEE---CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET-TTT--EE
T ss_pred CE-EEEecCC-----------CCEEEEEEe---cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC-CCC--EE
Confidence 87 6544211 124778887 44 5554322 1 1234556889999998877642 223 45
Q ss_pred EEEcCCCCCCCceeeecCc-ccccccCC-CCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecC-
Q 005240 327 WLVCPGSKDVAPRVLFDRV-FENVYSDP-GSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDIN- 403 (706)
Q Consensus 327 ~~~d~~~~~~~~~~l~~~~-~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~- 403 (706)
.+++++...++...+.... ........ ....+.|+|||++|++.... ...+..++++
T Consensus 203 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~--------------------~~~i~v~d~~~ 262 (343)
T 1ri6_A 203 DVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT--------------------ASLITVFSVSE 262 (343)
T ss_dssp EEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT--------------------TTEEEEEEECT
T ss_pred EEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC--------------------CCEEEEEEEcC
Confidence 5555543223332221100 00000000 11137899999998776421 1134445554
Q ss_pred -CCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeecC
Q 005240 404 -TGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITNF 470 (706)
Q Consensus 404 -~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~~ 470 (706)
+++.+.+...... .....+.|+|||++|+++.. ....-.+|.+|..+++.+++..+
T Consensus 263 ~~~~~~~~~~~~~~----------~~~~~~~~s~dg~~l~~~~~-~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 263 DGSVLSKEGFQPTE----------TQPRGFNVDHSGKYLIAAGQ-KSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp TSCCEEEEEEEECS----------SSCCCEEECTTSSEEEEECT-TTCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCceEEeeeecCC----------CccceEEECCCCCEEEEecC-CCCeEEEEEEcCCCceeeEcccc
Confidence 4544443222110 01235789999987776543 22333455557778877776654
No 130
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.53 E-value=2.9e-13 Score=135.13 Aligned_cols=188 Identities=16% Similarity=0.085 Sum_probs=130.9
Q ss_pred ceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEE
Q 005240 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (706)
Q Consensus 481 ~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 560 (706)
..+.+.+. .+|..|.++++.|.+ . +.|+||++||.+.. ........++..|++.||.|+.
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~---~---~~p~vv~~HG~~~~-------------~~~~~~~~~~~~l~~~G~~v~~ 80 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFG---E---IYDMAIIFHGFTAN-------------RNTSLLREIANSLRDENIASVR 80 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSS---S---SEEEEEEECCTTCC-------------TTCHHHHHHHHHHHHTTCEEEE
T ss_pred cceEEEec-cCCEEEEEEEEcCCC---C---CCCEEEEEcCCCCC-------------ccccHHHHHHHHHHhCCcEEEE
Confidence 45666666 489999999999864 1 26999999996421 0010112456678889999999
Q ss_pred cCCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 561 GPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 561 ~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
.+.+ |+|.+... .......++|+.++++++.++..+ ++++++|+|+||++++.++.++|++++++++.+|..+
T Consensus 81 ~d~~---G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 155 (270)
T 3pfb_A 81 FDFN---GHGDSDGKFENMTVLNEIEDANAILNYVKTDPHV--RNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAAT 155 (270)
T ss_dssp ECCT---TSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTE--EEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTH
T ss_pred Eccc---cccCCCCCCCccCHHHHHHhHHHHHHHHHhCcCC--CeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccc
Confidence 7766 45544332 223566789999999999876433 5999999999999999999999999999999998753
Q ss_pred CC----------------CC---------------------------------Ccc--------chHHHHHHHHHhCCCc
Q 005240 639 KT----------------LT---------------------------------PFG--------FQAERFFDALKGHGAL 661 (706)
Q Consensus 639 ~~----------------~~---------------------------------~~~--------~~~~~~~~~l~~~~~~ 661 (706)
.. .. |.. +-..+..+.+.+.-..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 235 (270)
T 3pfb_A 156 LKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQN 235 (270)
T ss_dssp HHHHHHHTEETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCSS
T ss_pred cchhhhhhhhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCCC
Confidence 11 00 000 0000444445554457
Q ss_pred EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHH
Q 005240 662 SRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 694 (706)
Q Consensus 662 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~ 694 (706)
.+++++++++|.+. ......+.+.+.+||+++
T Consensus 236 ~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 236 STLHLIEGADHCFS-DSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp EEEEEETTCCTTCC-THHHHHHHHHHHHHHC--
T ss_pred CeEEEcCCCCcccC-ccchHHHHHHHHHHHhhc
Confidence 89999999999886 445677888888888764
No 131
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.52 E-value=5.9e-12 Score=131.97 Aligned_cols=203 Identities=11% Similarity=0.117 Sum_probs=122.2
Q ss_pred eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCc
Q 005240 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (706)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~ 255 (706)
.+..++|||||++|++.+... ...|.+||+.+++........ ..+..++|||||+.
T Consensus 135 ~~~~v~fSpDg~~la~as~~~-----------d~~i~iwd~~~~~~~~~~~~~-------------~~V~~v~fspdg~~ 190 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKV-----------PAIMRIIDPSDLTEKFEIETR-------------GEVKDLHFSTDGKV 190 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCS-----------SCEEEEEETTTTEEEEEEECS-------------SCCCEEEECTTSSE
T ss_pred CEEEEEEcCCCCEEEEEECCC-----------CCEEEEeECCCCcEEEEeCCC-------------CceEEEEEccCCce
Confidence 467899999999998765432 247999999976654433322 12558899999996
Q ss_pred eEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEe--ecccccccceecCCCceEEEEeeccccceEEEEEcCC
Q 005240 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (706)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (706)
|+... + +.+.+++. ..++. ...+ .....+..+.|+|||+.++..+........++.+++.
T Consensus 191 -l~s~s--~-----------~~~~~~~~---~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~ 253 (365)
T 4h5i_A 191 -VAYIT--G-----------SSLEVIST---VTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIK 253 (365)
T ss_dssp -EEEEC--S-----------SCEEEEET---TTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEE
T ss_pred -EEecc--c-----------eeEEEEEe---ccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccc
Confidence 55432 1 12444444 23332 2222 2355678899999999998876555444567777766
Q ss_pred CCCCCceee--ecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeee
Q 005240 333 SKDVAPRVL--FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERI 410 (706)
Q Consensus 333 ~~~~~~~~l--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l 410 (706)
......... ...... ....+.|||||++|+....+ ..+.++|+.+++..+.
T Consensus 254 ~~~~~~~~~~~~~~~~~------~V~~~~~Spdg~~lasgs~D---------------------~~V~iwd~~~~~~~~~ 306 (365)
T 4h5i_A 254 SGNTSVLRSKQVTNRFK------GITSMDVDMKGELAVLASND---------------------NSIALVKLKDLSMSKI 306 (365)
T ss_dssp TTEEEEEEEEEEESSCS------CEEEEEECTTSCEEEEEETT---------------------SCEEEEETTTTEEEEE
T ss_pred cceecceeeeeecCCCC------CeEeEEECCCCCceEEEcCC---------------------CEEEEEECCCCcEEEE
Confidence 532111111 111111 12247789999998876421 1366788888865432
Q ss_pred e-cccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 005240 411 W-ESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (706)
Q Consensus 411 ~-~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~ 461 (706)
+ ... ......++|||||++|+-...+. .|.+|++..
T Consensus 307 ~~~gH-----------~~~V~~v~fSpdg~~laS~S~D~----tvrvw~ip~ 343 (365)
T 4h5i_A 307 FKQAH-----------SFAITEVTISPDSTYVASVSAAN----TIHIIKLPL 343 (365)
T ss_dssp ETTSS-----------SSCEEEEEECTTSCEEEEEETTS----EEEEEECCT
T ss_pred ecCcc-----------cCCEEEEEECCCCCEEEEEeCCC----eEEEEEcCC
Confidence 2 221 12233579999998776543333 488888754
No 132
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.52 E-value=4.1e-12 Score=132.11 Aligned_cols=197 Identities=16% Similarity=0.185 Sum_probs=121.7
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCcee--e-cccCCCccccccccceEEecCCcEEEEEecCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK--P-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~--~-lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~ 108 (706)
.+..++|||||++||.... ++ .|.++++++++.. . +.... ...+..++|||||++|+..+.+
T Consensus 18 ~v~~l~~sp~g~~las~~~--------D~--~i~iw~~~~~~~~~~~~~~~~h----~~~v~~~~~sp~g~~l~s~s~D- 82 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGG--------DR--RIRIWGTEGDSWICKSVLSEGH----QRTVRKVAWSPCGNYLASASFD- 82 (345)
T ss_dssp CEEEEEECTTSSCEEEEET--------TS--CEEEEEEETTEEEEEEEECSSC----SSCEEEEEECTTSSEEEEEETT-
T ss_pred cEEEEEECCCCCEEEEEcC--------CC--eEEEEEcCCCcceeeeeecccc----CCcEEEEEECCCCCEEEEEECC-
Confidence 4778999999999988653 33 4555566665422 1 21111 1237789999999998876531
Q ss_pred CCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC-CC---ceecCCC-ceEeeeeeC
Q 005240 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GT---AKDFGTP-AVYTAVEPS 183 (706)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~-g~---~~~lt~~-~~~~~~~~S 183 (706)
+.+.++++. +. ...+... ..+..++|+
T Consensus 83 ------------------------------------------------~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~s 114 (345)
T 3fm0_A 83 ------------------------------------------------ATTCIWKKNQDDFECVTTLEGHENEVKSVAWA 114 (345)
T ss_dssp ------------------------------------------------SCEEEEEECCC-EEEEEEECCCSSCEEEEEEC
T ss_pred ------------------------------------------------CcEEEEEccCCCeEEEEEccCCCCCceEEEEe
Confidence 334445552 22 2334333 678899999
Q ss_pred CCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEe
Q 005240 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~ 262 (706)
|||++|+..+.+ ..|.+|++..+.. ..+....... ..+..+.|+|+++. |+...
T Consensus 115 p~~~~l~s~s~D-------------~~v~iwd~~~~~~~~~~~~~~~h~----------~~v~~~~~~p~~~~-l~s~s- 169 (345)
T 3fm0_A 115 PSGNLLATCSRD-------------KSVWVWEVDEEDEYECVSVLNSHT----------QDVKHVVWHPSQEL-LASAS- 169 (345)
T ss_dssp TTSSEEEEEETT-------------SCEEEEEECTTSCEEEEEEECCCC----------SCEEEEEECSSSSC-EEEEE-
T ss_pred CCCCEEEEEECC-------------CeEEEEECCCCCCeEEEEEecCcC----------CCeEEEEECCCCCE-EEEEe-
Confidence 999999866544 3799999975432 2221111110 12447899999986 55332
Q ss_pred ccCCCCccccCccceeeeecCCCCCCCCc---eEEeecccccccceecCCCceEEEEeeccccceEEEEEcCC
Q 005240 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (706)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (706)
.+ ..|.+++. ..++. ..+..+...+..+.|+|||+.|+..+. ++..+||.....
T Consensus 170 ~d-----------~~i~~w~~---~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~--D~~v~iW~~~~~ 226 (345)
T 3fm0_A 170 YD-----------DTVKLYRE---EEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD--DRTVRIWRQYLP 226 (345)
T ss_dssp TT-----------SCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET--TSCEEEEEEECT
T ss_pred CC-----------CcEEEEEe---cCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC--CCeEEEeccccC
Confidence 11 23666766 33332 234455677889999999999887653 356778876443
No 133
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.52 E-value=3.8e-14 Score=144.69 Aligned_cols=166 Identities=14% Similarity=0.159 Sum_probs=119.1
Q ss_pred ceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEE
Q 005240 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (706)
Q Consensus 481 ~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 560 (706)
..+.+.|. +..+...+|.|.+- .++.|+||++|||++.. +....+ ...++.|+++||+|+.
T Consensus 57 ~~~~i~y~---~~~~~~~~~~p~~~----~~~~p~vv~~HGgg~~~--------~~~~~~----~~~~~~l~~~G~~v~~ 117 (303)
T 4e15_A 57 TVDHLRYG---EGRQLVDVFYSEKT----TNQAPLFVFVHGGYWQE--------MDMSMS----CSIVGPLVRRGYRVAV 117 (303)
T ss_dssp EEEEEECS---STTCEEEEEECTTC----CTTCCEEEEECCSTTTS--------CCGGGS----CTTHHHHHHTTCEEEE
T ss_pred ceeeeccC---CCCcEEEEEecCCC----CCCCCEEEEECCCcCcC--------CChhHH----HHHHHHHHhCCCEEEE
Confidence 34555555 33456678888742 22479999999986532 111111 2356788899999999
Q ss_pred cCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEEechHHHHHHHHHHhCCC-------ceeEEEe
Q 005240 561 GPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLAHAPH-------LFCCGIA 632 (706)
Q Consensus 561 ~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~-~~id~~~i~i~G~S~GG~~a~~~~~~~p~-------~~~a~v~ 632 (706)
+++++..+ . .....+.|+.++++|+.+. ..++++||+|+|||+||++++.++.+.+. +++++++
T Consensus 118 ~d~r~~~~---~-----~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~ 189 (303)
T 4e15_A 118 MDYNLCPQ---V-----TLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIF 189 (303)
T ss_dssp ECCCCTTT---S-----CHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEE
T ss_pred ecCCCCCC---C-----ChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEE
Confidence 88864422 1 2355688999999999873 33568999999999999999999987542 7999999
Q ss_pred ccCCCCCCC-----------------------CCc-----------c----------------chHHHHHHHHHhCCCcE
Q 005240 633 RSGSYNKTL-----------------------TPF-----------G----------------FQAERFFDALKGHGALS 662 (706)
Q Consensus 633 ~~~~~d~~~-----------------------~~~-----------~----------------~~~~~~~~~l~~~~~~~ 662 (706)
.+|.++... .|. . -+..+++++|+..|.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~ 269 (303)
T 4e15_A 190 LCGVYDLRELSNLESVNPKNILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKA 269 (303)
T ss_dssp ESCCCCCHHHHTCTTTSGGGTTCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCE
T ss_pred EeeeeccHhhhcccccchhhhhcCCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCce
Confidence 999876310 011 0 02238999999999999
Q ss_pred EEEEeCCCCcc
Q 005240 663 RLVLLPFEHHV 673 (706)
Q Consensus 663 ~~~~~~~~~H~ 673 (706)
+++++|+++|.
T Consensus 270 ~~~~~~g~~H~ 280 (303)
T 4e15_A 270 SFTLFKGYDHF 280 (303)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEeCCCCch
Confidence 99999999994
No 134
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.52 E-value=1.6e-12 Score=138.60 Aligned_cols=255 Identities=11% Similarity=0.121 Sum_probs=148.2
Q ss_pred ceeEeecCCCCCCCCe-eeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCC----C-ceeeccc
Q 005240 6 GIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET----G-EAKPLFE 79 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~----g-~~~~lt~ 79 (706)
.|.|+++.. +.. +.+..+.....+..+.|||||++||.... + ..|.++++.+ . ....+..
T Consensus 46 ~v~iw~~~~----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--------d--g~v~vw~~~~~~~~~~~~~~~~~ 111 (416)
T 2pm9_A 46 SLELWSLLA----ADSEKPIASLQVDSKFNDLDWSHNNKIIAGALD--------N--GSLELYSTNEANNAINSMARFSN 111 (416)
T ss_dssp CCEEEESSS----GGGCSCSCCCCCSSCEEEEEECSSSSCEEEEES--------S--SCEEEECCSSTTSCCCEEEECCC
T ss_pred eEEEEEccC----CCCCcEEEEEecCCceEEEEECCCCCeEEEEcc--------C--CeEEEeecccccccccchhhccC
Confidence 588999976 432 23333334446889999999999988653 3 4566667665 2 3333432
Q ss_pred CCCccccccccceEEecC-CcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccce
Q 005240 80 SPDICLNAVFGSFVWVNN-STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (706)
Q Consensus 80 ~~~~~~~~~~~~~~wSpD-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (706)
+.. .+..+.|+|| +++|+..+.+ +.
T Consensus 112 h~~-----~v~~~~~~~~~~~~l~s~~~d-------------------------------------------------g~ 137 (416)
T 2pm9_A 112 HSS-----SVKTVKFNAKQDNVLASGGNN-------------------------------------------------GE 137 (416)
T ss_dssp SSS-----CCCEEEECSSSTTBEEEECSS-------------------------------------------------SC
T ss_pred Ccc-----ceEEEEEcCCCCCEEEEEcCC-------------------------------------------------Ce
Confidence 332 3778999999 7776665321 45
Q ss_pred EEEEccC-CC------c-eec---CCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEccc
Q 005240 159 LVLGSLD-GT------A-KDF---GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD 226 (706)
Q Consensus 159 l~~~~l~-g~------~-~~l---t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 226 (706)
|.++++. ++ . ..+ ... ..+..++|+|++..++++.... ..|.+|++.+++......
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------------g~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS------------NFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS------------SCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC------------CCEEEEECCCCCcceEEe
Confidence 6666773 33 1 111 112 5678999999954444444332 379999998765443333
Q ss_pred CCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCC-Cc-eEEe-eccccccc
Q 005240 227 LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-KP-EILH-KLDLRFRS 303 (706)
Q Consensus 227 ~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~~-~~l~-~~~~~~~~ 303 (706)
....... ....+..+.|+|++.. +++....++.. ..|.++|+ ..+ .+ ..+. .....+..
T Consensus 206 ~~~~~~~------~~~~v~~~~~~~~~~~-~l~~~~~d~~~--------~~i~~~d~---~~~~~~~~~~~~~~~~~v~~ 267 (416)
T 2pm9_A 206 YTSPNSG------IKQQLSVVEWHPKNST-RVATATGSDND--------PSILIWDL---RNANTPLQTLNQGHQKGILS 267 (416)
T ss_dssp CCCCSSC------CCCCEEEEEECSSCTT-EEEEEECCSSS--------CCCCEEET---TSTTSCSBCCCSCCSSCEEE
T ss_pred ccccccc------cCCceEEEEECCCCCC-EEEEEECCCCC--------ceEEEEeC---CCCCCCcEEeecCccCceeE
Confidence 2211000 0022457899999976 43333222111 14778887 333 33 3344 46678889
Q ss_pred ceecC-CCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCC-CEEEEe
Q 005240 304 VSWCD-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTG-TNVIAK 370 (706)
Q Consensus 304 ~~wsp-Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~ 370 (706)
+.|+| |+..|+..+. ...|.++|+.++ +....+..... ....+.|+||| +.|+..
T Consensus 268 ~~~s~~~~~~l~s~~~----dg~v~~wd~~~~--~~~~~~~~~~~------~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 268 LDWCHQDEHLLLSSGR----DNTVLLWNPESA--EQLSQFPARGN------WCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp EEECSSCSSCEEEEES----SSEEEEECSSSC--CEEEEEECSSS------CCCCEEECTTCTTEEEEC
T ss_pred EEeCCCCCCeEEEEeC----CCCEEEeeCCCC--ccceeecCCCC------ceEEEEECCCCCCEEEEE
Confidence 99999 8888887652 235777888774 23322222111 23347899999 555544
No 135
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.52 E-value=5.5e-14 Score=148.69 Aligned_cols=192 Identities=13% Similarity=0.018 Sum_probs=127.0
Q ss_pred CceEEEEEEcc-CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeE-
Q 005240 480 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA- 557 (706)
Q Consensus 480 ~~~~~~~~~~~-dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~- 557 (706)
.+.+.+++.+. .|.++..++|+|++++ . .++|+|+++||+.+. ... .....+..|++.|++
T Consensus 166 G~v~~~~~~S~~~g~~~~~~vy~P~~~~-~--~~~PvlvllHG~~~~-------------~~~-~~~~~~~~l~~~g~~~ 228 (403)
T 3c8d_A 166 IPAKEIIWKSERLKNSRRVWIFTTGDVT-A--EERPLAVLLDGEFWA-------------QSM-PVWPVLTSLTHRQQLP 228 (403)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEEC--------CCCCEEEESSHHHHH-------------HTS-CCHHHHHHHHHTTSSC
T ss_pred CceEEEEEEccccCCcEEEEEEeCCCCC-C--CCCCEEEEeCCHHHh-------------hcC-cHHHHHHHHHHcCCCC
Confidence 46678888875 6789999999999864 2 259999999996321 110 112346778888864
Q ss_pred ---EEEcCCCCcCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEEechHHHHHHHHHHhCCCceeEEE
Q 005240 558 ---VLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 631 (706)
Q Consensus 558 ---v~~~~~~~~~g~g~~~~~-~~~~~~~~~D~~~~~~~l~~~~--~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v 631 (706)
|+.+++++..++...+.. ..+.+...+ +++.++.++. .+|+++++|+|+||||++|++++.++|++|++++
T Consensus 229 p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~---el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~ 305 (403)
T 3c8d_A 229 PAVYVLIDAIDTTHRAHELPCNADFWLAVQQ---ELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVL 305 (403)
T ss_dssp SCEEEEECCCSHHHHHHHSSSCHHHHHHHHH---THHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEE
T ss_pred CeEEEEECCCCCccccccCCChHHHHHHHHH---HHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEE
Confidence 777666542111111111 122222223 4456666643 2688999999999999999999999999999999
Q ss_pred eccCCCCCCC----------------------CCcc-----------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc
Q 005240 632 ARSGSYNKTL----------------------TPFG-----------FQAERFFDALKGHGALSRLVLLPFEHHVYAARE 678 (706)
Q Consensus 632 ~~~~~~d~~~----------------------~~~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 678 (706)
+.+|.+++.. .+.. -+..+|+++|+++|+++++.+||| +|.+.
T Consensus 306 ~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~D~~~~~~~~~l~~~L~~~G~~v~~~~~~G-gH~~~--- 381 (403)
T 3c8d_A 306 SQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDG-GHDAL--- 381 (403)
T ss_dssp EESCCTTTTCTTSSSCCHHHHHHHTTSSCCCSCEEEEEEESSCHHHHHHHHHHHHHTGGGTTSEEEEEESC-CSCHH---
T ss_pred EeccccccCCCCCCcHHHHHHHHHhccccCCCceEEEEeeCCCchhHHHHHHHHHHHHhCCCCEEEEEeCC-CCCHH---
Confidence 9999875321 0100 023489999999999999999999 59753
Q ss_pred cHHHHHHHHHHHHHHHh
Q 005240 679 NVMHVIWETDRWLQKYC 695 (706)
Q Consensus 679 ~~~~~~~~~~~f~~~~l 695 (706)
.+...+..++.||.+.+
T Consensus 382 ~w~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 382 CWRGGLMQGLIDLWQPL 398 (403)
T ss_dssp HHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhccc
Confidence 24455667777776654
No 136
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.52 E-value=7.4e-12 Score=130.05 Aligned_cols=226 Identities=12% Similarity=0.041 Sum_probs=134.4
Q ss_pred cccceee-----CC-CCCeEEEEeeccccccccCCceeEEEEEcCCCc-------e-eecccCCCccccccccceEEecC
Q 005240 32 KINFVSW-----SP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------A-KPLFESPDICLNAVFGSFVWVNN 97 (706)
Q Consensus 32 ~~~~~~~-----SP-DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~-------~-~~lt~~~~~~~~~~~~~~~wSpD 97 (706)
.+..+.| +| ||+.||..+. ++...| +++..++ . ..+..+.. .+..+.|+||
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~--------D~~v~i--Wd~~~~~~~~~~~~~~~~l~~h~~-----~V~~~~~~~~ 87 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSR--------DKTVMI--WKLYEEEQNGYFGIPHKALTGHNH-----FVSDLALSQE 87 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEET--------TSCEEE--EEECSSCCSSBSEEEEEEECCCSS-----CEEEEEECSS
T ss_pred hhhheeeEEEeecCCCCCEEEEEcC--------CCEEEE--EECCcCCcccccccccchhccCCC-----ceEEEEECCC
Confidence 4778888 77 9999887653 444444 4554322 1 22222222 3778999999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-
Q 005240 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP- 174 (706)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~- 174 (706)
+++|+..+.+ +.|.++|+ +++ ...+...
T Consensus 88 ~~~l~s~s~D-------------------------------------------------~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 88 NCFAISSSWD-------------------------------------------------KTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp TTEEEEEETT-------------------------------------------------SEEEEEETTSSCEEEEEECCC
T ss_pred CCEEEEEcCC-------------------------------------------------CcEEEEECCCCcEEEEEcCCC
Confidence 9988765421 56778888 553 3444444
Q ss_pred ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCC
Q 005240 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (706)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~ 254 (706)
..+..++|+|||++|+..+.. ..|.+|++.+.....+....... ..+..+.|+|++.
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d-------------~~i~~wd~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAE-------------REIKLWNILGECKFSSAEKENHS----------DWVSCVRYSPIMK 175 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETT-------------SCEEEEESSSCEEEECCTTTSCS----------SCEEEEEECCCCC
T ss_pred CcEEEEEECCCCCEEEEEcCC-------------CEEEEEeccCCceeeeecccCCC----------ceeeeeeeccccc
Confidence 678899999999999765543 37999999865544433221110 1234678888873
Q ss_pred c---------eEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceE
Q 005240 255 S---------TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTR 325 (706)
Q Consensus 255 ~---------~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 325 (706)
. .|+ ... ....|.+||. .......+..+...+..+.|+|||+.|+..+. ...
T Consensus 176 ~~~~~~~~~~~l~-s~~-----------~d~~i~iwd~---~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~----dg~ 236 (343)
T 2xzm_R 176 SANKVQPFAPYFA-SVG-----------WDGRLKVWNT---NFQIRYTFKAHESNVNHLSISPNGKYIATGGK----DKK 236 (343)
T ss_dssp SCSCCCSSCCEEE-EEE-----------TTSEEEEEET---TTEEEEEEECCSSCEEEEEECTTSSEEEEEET----TCE
T ss_pred cccccCCCCCEEE-EEc-----------CCCEEEEEcC---CCceeEEEcCccccceEEEECCCCCEEEEEcC----CCe
Confidence 2 122 211 1235777876 33333345556778889999999999887652 234
Q ss_pred EEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 326 TWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 326 l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
|.++|+.... .+....... .....+.|+|++.+++...
T Consensus 237 v~iwd~~~~~-~~~~~~~~~-------~~v~~v~~sp~~~~la~~~ 274 (343)
T 2xzm_R 237 LLIWDILNLT-YPQREFDAG-------STINQIAFNPKLQWVAVGT 274 (343)
T ss_dssp EEEEESSCCS-SCSEEEECS-------SCEEEEEECSSSCEEEEEE
T ss_pred EEEEECCCCc-ccceeecCC-------CcEEEEEECCCCCEEEEEC
Confidence 6666663321 122222111 0122477899998876543
No 137
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.52 E-value=7.3e-12 Score=129.92 Aligned_cols=275 Identities=9% Similarity=0.058 Sum_probs=163.4
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+....|||||++|+..+. + ..|.++|+.+++.......... .+..+.|+|||++|+..+.+
T Consensus 57 ~v~~~~~s~d~~~l~s~s~--------D--g~v~iWd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~d---- 118 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQ--------D--GKLIIWDSYTTNKVHAIPLRSS----WVMTCAYAPSGNYVACGGLD---- 118 (340)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--TEEEEEETTTCCEEEEEECSSS----CEEEEEECTTSSEEEEEETT----
T ss_pred ceEEEEECCCCCEEEEEeC--------C--CcEEEEECCCCCcceEeecCCc----cEEEEEECCCCCEEEEEeCC----
Confidence 5889999999999987642 2 4677788887765433222211 26788999999998876421
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC-C--Cc---eecCCC-ceEeeeeeCC
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-G--TA---KDFGTP-AVYTAVEPSP 184 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~-g--~~---~~lt~~-~~~~~~~~Sp 184 (706)
+.+.++++. + .. +.+... ..+..+.|+|
T Consensus 119 ---------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 153 (340)
T 1got_B 119 ---------------------------------------------NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD 153 (340)
T ss_dssp ---------------------------------------------CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE
T ss_pred ---------------------------------------------CeEEEEECccCCCcceeEEEecCCCccEEEEEECC
Confidence 455666662 2 11 122223 5678889999
Q ss_pred CCcEEEEEeeccCcccccccccccceEEEEecCCCeeE-EcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEec
Q 005240 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (706)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~ 263 (706)
+++ |+..+.+ ..|.+||+.+++.. .+..+. ..+..+.|+|+++. |+ ....
T Consensus 154 ~~~-l~s~s~d-------------~~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~-l~-sg~~ 204 (340)
T 1got_B 154 DNQ-IVTSSGD-------------TTCALWDIETGQQTTTFTGHT-------------GDVMSLSLAPDTRL-FV-SGAC 204 (340)
T ss_dssp TTE-EEEEETT-------------SCEEEEETTTTEEEEEECCCS-------------SCEEEEEECTTSSE-EE-EEET
T ss_pred CCc-EEEEECC-------------CcEEEEECCCCcEEEEEcCCC-------------CceEEEEECCCCCE-EE-EEeC
Confidence 986 4433322 37999999866543 332221 12447899999985 43 2211
Q ss_pred cCCCCccccCccceeeeecCCCCCCCCc-eEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeee
Q 005240 264 DRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (706)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 342 (706)
+ ..|.+||+ ..+.. ..+..+...+..+.|+||++.|+..+.+ + .|.++|+.++ +....+
T Consensus 205 d-----------~~v~~wd~---~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d--~--~v~iwd~~~~--~~~~~~ 264 (340)
T 1got_B 205 D-----------ASAKLWDV---REGMCRQTFTGHESDINAICFFPNGNAFATGSDD--A--TCRLFDLRAD--QELMTY 264 (340)
T ss_dssp T-----------SCEEEEET---TTCSEEEEECCCSSCEEEEEECTTSSEEEEEETT--S--CEEEEETTTT--EEEEEE
T ss_pred C-----------CcEEEEEC---CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCC--C--cEEEEECCCC--cEEEEE
Confidence 1 24788888 44443 3455567788899999999988876522 3 3556666653 222222
Q ss_pred cCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhh
Q 005240 343 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 422 (706)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 422 (706)
..... ..+...+.|+|+|++|+..... + .+..+|+.+++.........
T Consensus 265 ~~~~~----~~~v~~~~~s~~g~~l~~g~~d----~-----------------~i~vwd~~~~~~~~~~~~h~------- 312 (340)
T 1got_B 265 SHDNI----ICGITSVSFSKSGRLLLAGYDD----F-----------------NCNVWDALKADRAGVLAGHD------- 312 (340)
T ss_dssp CCTTC----CSCEEEEEECTTSSEEEEEETT----S-----------------EEEEEETTTCCEEEEEECCS-------
T ss_pred ccCCc----ccceEEEEECCCCCEEEEECCC----C-----------------eEEEEEcccCcEeeEeecCC-------
Confidence 11100 0012347789999988776521 1 35566766665433332211
Q ss_pred hhhccCCCceecccCCCEEEEEEecCCCCcEEEEEE
Q 005240 423 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (706)
Q Consensus 423 ~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~ 458 (706)
.....+.|+|||+.|+....+.. |.+||
T Consensus 313 ----~~v~~~~~s~dg~~l~s~s~D~~----i~iWd 340 (340)
T 1got_B 313 ----NRVSCLGVTDDGMAVATGSWDSF----LKIWN 340 (340)
T ss_dssp ----SCEEEEEECTTSSCEEEEETTSC----EEEEC
T ss_pred ----CcEEEEEEcCCCCEEEEEcCCcc----EEecC
Confidence 12234689999987775543332 55553
No 138
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.50 E-value=9.2e-14 Score=146.81 Aligned_cols=171 Identities=16% Similarity=0.111 Sum_probs=115.1
Q ss_pred CceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCC--------------CCCC---
Q 005240 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG--------------DKLP--- 574 (706)
Q Consensus 512 ~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g--------------~~~~--- 574 (706)
++|+||++||++.. .......++.|+++||+|+.++.++..+.. ..+.
T Consensus 97 ~~P~Vv~~HG~~~~---------------~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 161 (383)
T 3d59_A 97 KYPLVVFSHGLGAF---------------RTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLR 161 (383)
T ss_dssp CEEEEEEECCTTCC---------------TTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECC
T ss_pred CCCEEEEcCCCCCC---------------chHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeecc
Confidence 58999999997421 011235678899999999998877542210 0000
Q ss_pred ---ch-------hhHHHHHHHHHHHHHHHHH--------------------cCCCCCCcEEEEEechHHHHHHHHHHhCC
Q 005240 575 ---ND-------RFVEQLVSSAEAAVEEVVR--------------------RGVADPSRIAVGGHSYGAFMTAHLLAHAP 624 (706)
Q Consensus 575 ---~~-------~~~~~~~~D~~~~~~~l~~--------------------~~~id~~~i~i~G~S~GG~~a~~~~~~~p 624 (706)
.. ........|+..+++++.+ ...+|++||+++|||+||++++.++.+.
T Consensus 162 ~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~- 240 (383)
T 3d59_A 162 TLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSED- 240 (383)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHC-
T ss_pred ccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhC-
Confidence 00 1122346899999999976 4557889999999999999999999888
Q ss_pred CceeEEEeccCCCCCC--------CCCcc--------c-hHHHHHHHHHhCCCcEEEEEeCCCCccCCC-----------
Q 005240 625 HLFCCGIARSGSYNKT--------LTPFG--------F-QAERFFDALKGHGALSRLVLLPFEHHVYAA----------- 676 (706)
Q Consensus 625 ~~~~a~v~~~~~~d~~--------~~~~~--------~-~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~----------- 676 (706)
.+|+|+|+.+|..... ..|.. . ...+..++|...+.+.++++|+|++|.+..
T Consensus 241 ~~v~a~v~~~~~~~p~~~~~~~~i~~P~Lii~g~~D~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~ 320 (383)
T 3d59_A 241 QRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIG 320 (383)
T ss_dssp TTCCEEEEESCCCTTCCGGGGGSCCSCEEEEEETTTCCHHHHHHHHTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHH
T ss_pred CCccEEEEeCCccCCCchhhhccCCCCEEEEecccccchhhHHHHHHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhh
Confidence 4799999998854211 11211 1 111344566667789999999999998631
Q ss_pred -------cccH----HHHHHHHHHHHHHHhccC
Q 005240 677 -------RENV----MHVIWETDRWLQKYCLSN 698 (706)
Q Consensus 677 -------~~~~----~~~~~~~~~f~~~~l~~~ 698 (706)
..+. ....+.+++||+++|+..
T Consensus 321 ~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 321 HMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp HHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 1112 233357999999999754
No 139
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.50 E-value=2.2e-13 Score=137.36 Aligned_cols=140 Identities=14% Similarity=0.173 Sum_probs=103.1
Q ss_pred hHHHHHHHCCeEEEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC
Q 005240 546 TSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 623 (706)
Q Consensus 546 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~ 623 (706)
.+++.|+++||.|+.++.+ |+|.+... .....+.+.|+.+++++|.+. .+++.|+||||||.+++.++.++
T Consensus 69 ~la~~La~~Gy~Via~Dl~---GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~----~~~v~lvG~S~GG~ia~~~a~~~ 141 (281)
T 4fbl_A 69 FLAEGFARAGYTVATPRLT---GHGTTPAEMAASTASDWTADIVAAMRWLEER----CDVLFMTGLSMGGALTVWAAGQF 141 (281)
T ss_dssp HHHHHHHHTTCEEEECCCT---TSSSCHHHHHTCCHHHHHHHHHHHHHHHHHH----CSEEEEEEETHHHHHHHHHHHHS
T ss_pred HHHHHHHHCCCEEEEECCC---CCCCCCccccCCCHHHHHHHHHHHHHHHHhC----CCeEEEEEECcchHHHHHHHHhC
Confidence 4678899999999996665 66766321 223456688999999999765 36899999999999999999999
Q ss_pred CCceeEEEeccCCCCCCC-----------CC-----------------ccc-----------------------------
Q 005240 624 PHLFCCGIARSGSYNKTL-----------TP-----------------FGF----------------------------- 646 (706)
Q Consensus 624 p~~~~a~v~~~~~~d~~~-----------~~-----------------~~~----------------------------- 646 (706)
|++++++|+.+|...... .+ ..+
T Consensus 142 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 221 (281)
T 4fbl_A 142 PERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPA 221 (281)
T ss_dssp TTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCE
T ss_pred chhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCchHHHHHHHHhhhhccccccccCCCE
Confidence 999999999998643210 00 000
Q ss_pred --------------hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHH
Q 005240 647 --------------QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 694 (706)
Q Consensus 647 --------------~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~ 694 (706)
..+++++++. +.+++++++|+++|.+.....+..+.+.+.+||++|
T Consensus 222 Lii~G~~D~~v~~~~~~~l~~~l~--~~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 222 LIIQSREDHVVPPHNGELIYNGIG--STEKELLWLENSYHVATLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp EEEEESSCSSSCTHHHHHHHHHCC--CSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHTC
T ss_pred EEEEeCCCCCcCHHHHHHHHHhCC--CCCcEEEEECCCCCcCccccCHHHHHHHHHHHHHhC
Confidence 0003333332 356799999999998765556778899999999986
No 140
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.50 E-value=1.3e-11 Score=126.87 Aligned_cols=225 Identities=9% Similarity=0.071 Sum_probs=135.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCC---c-eeecccCCCccccccccceEEecCCcEEEEEecC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG---E-AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS 107 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g---~-~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~ 107 (706)
.+..++|||++..++++... ++...||-+..... . .+.+..+.. .+..+.|+|||++|+..+.+
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~-------D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASR-------DKTLISWKLTGDDQKFGVPVRSFKGHSH-----IVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp CEEEEEECSSCTTEEEEEET-------TSEEEEEEEEEETTEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEccCCCccEEEEecC-------CccEEEecCCCCCccccccceEEeCCcc-----cEEEEEECCCCCEEEEEeCC
Confidence 57889999987444344322 44444554332111 1 122222222 26788999999998876421
Q ss_pred CCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-ceEeeeeeCC
Q 005240 108 SRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSP 184 (706)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~Sp 184 (706)
+.|.++|+ +|+ .+.+... ..+..++|+|
T Consensus 87 -------------------------------------------------~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 117 (319)
T 3frx_A 87 -------------------------------------------------KTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117 (319)
T ss_dssp -------------------------------------------------SEEEEEETTTTEEEEEEECCSSCEEEEEECT
T ss_pred -------------------------------------------------CEEEEEECCCCCeeEEEccCCCcEEEEEEcC
Confidence 57788888 563 3445444 6788999999
Q ss_pred CCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCC-----ceEEE
Q 005240 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP-----STLYW 259 (706)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~-----~~l~~ 259 (706)
+++.|+..+.+ ..|.+|++.+.....+..... .+..+.|+|++. ..|+
T Consensus 118 ~~~~l~s~s~D-------------~~i~vwd~~~~~~~~~~~h~~-------------~v~~~~~~~~~~~~~~~~~l~- 170 (319)
T 3frx_A 118 KASMIISGSRD-------------KTIKVWTIKGQCLATLLGHND-------------WVSQVRVVPNEKADDDSVTII- 170 (319)
T ss_dssp TSCEEEEEETT-------------SCEEEEETTSCEEEEECCCSS-------------CEEEEEECCC------CCEEE-
T ss_pred CCCEEEEEeCC-------------CeEEEEECCCCeEEEEeccCC-------------cEEEEEEccCCCCCCCccEEE-
Confidence 99998765543 379999998877666543321 133567777543 1122
Q ss_pred EEeccCCCCccccCccceeeeecCCCCCCCCce-EEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCc
Q 005240 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (706)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 338 (706)
... ....|.+||+ ...+.. .+..+...+..+.|+|||+.|+..+. ...|.++|+.++ +.
T Consensus 171 s~~-----------~d~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~----dg~i~iwd~~~~--~~ 230 (319)
T 3frx_A 171 SAG-----------NDKMVKAWNL---NQFQIEADFIGHNSNINTLTASPDGTLIASAGK----DGEIMLWNLAAK--KA 230 (319)
T ss_dssp EEE-----------TTSCEEEEET---TTTEEEEEECCCCSCEEEEEECTTSSEEEEEET----TCEEEEEETTTT--EE
T ss_pred EEe-----------CCCEEEEEEC---CcchhheeecCCCCcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCC--cE
Confidence 211 1124778888 443332 34456778889999999998887652 234667777763 22
Q ss_pred eeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 339 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
....... . ....+.|+|||.+++...
T Consensus 231 ~~~~~~~-~------~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 231 MYTLSAQ-D------EVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEEEECC-S------CEEEEEECSSSSEEEEEE
T ss_pred EEEecCC-C------cEEEEEEcCCCCEEEEEc
Confidence 2222111 1 123478999999887764
No 141
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.50 E-value=6.4e-12 Score=131.48 Aligned_cols=300 Identities=12% Similarity=0.027 Sum_probs=157.3
Q ss_pred CCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccc
Q 005240 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (706)
Q Consensus 59 ~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (706)
++.-.+|.+|.++|+.++++.... ..+..++|||||++||+........
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~~~----~~p~~l~~spdg~~l~~~~~~~~~~--------------------------- 74 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDAEV----ANPSYLIPSADGKFVYSVNEFSKDQ--------------------------- 74 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEEEC----SCCCSEEECTTSSEEEEEECCSSTT---------------------------
T ss_pred CCCEEEEEEeCCCCCEEEeecccC----CCCceEEECCCCCEEEEEEccCCCC---------------------------
Confidence 344567777778888877754311 1256789999999988875321000
Q ss_pred hhccCCchhhhhhhhcccceEEEEccC-CCceecCCC----ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEE
Q 005240 139 DNLLKDEYDESLFDYYTTAQLVLGSLD-GTAKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQV 213 (706)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~~l~-g~~~~lt~~----~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~ 213 (706)
..-.+|.++.+ |+.+.+... .....+++ ||++|++..... ..+.+
T Consensus 75 ----------------~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~------------~~v~~ 124 (361)
T 3scy_A 75 ----------------AAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSG------------GSITV 124 (361)
T ss_dssp ----------------CEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTT------------TEEEE
T ss_pred ----------------CcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCC------------CEEEE
Confidence 11345666654 655554322 34455666 999887765432 47889
Q ss_pred EecCC-CeeEEccc---CCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCC
Q 005240 214 WTTDG-KLVRELCD---LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE 289 (706)
Q Consensus 214 ~~~~~-~~~~~l~~---~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 289 (706)
|+++. +.+..+.. ..+....+ ..........+.|+|||+. |++.. . + .+.+++++++. .++
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~spdg~~-l~~~~-~--~--------~~~v~v~~~~~-~~~ 189 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDK--ERQTMPHLHCVRITPDGKY-LLADD-L--G--------TDQIHKFNINP-NAN 189 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCT--TTCSSCCEEEEEECTTSSE-EEEEE-T--T--------TTEEEEEEECT-TCC
T ss_pred EEeCCCCcCcccceeEEccCCCCCc--cccCCCcceEEEECCCCCE-EEEEe-C--C--------CCEEEEEEEcC-CCC
Confidence 99873 32222211 11110000 0000011235899999997 66442 1 1 12355665521 232
Q ss_pred ----C-ce------EE-eecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCc
Q 005240 290 ----K-PE------IL-HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPM 357 (706)
Q Consensus 290 ----~-~~------~l-~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~ 357 (706)
+ +. .+ .........+.|+|||+.+++.. ..+ ..|++++++++ +...+........ ...+...
T Consensus 190 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~-~~~--~~v~v~~~~~g--~~~~~~~~~~~~~-~~~~~~~ 263 (361)
T 3scy_A 190 ADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN-EIG--GTVIAFRYADG--MLDEIQTVAADTV-NAQGSGD 263 (361)
T ss_dssp TTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTT--CEEEEEEEETT--EEEEEEEEESCSS-CCCCEEE
T ss_pred cccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc-CCC--CeEEEEEecCC--ceEEeEEEecCCC-CCCCccc
Confidence 2 21 11 12234456789999999887764 222 34566665553 3332211110000 0001124
Q ss_pred eEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccC
Q 005240 358 MTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLN 437 (706)
Q Consensus 358 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~D 437 (706)
+.|||||++|++..... .+...+|.++.++|+.+.+...... .....+.||||
T Consensus 264 i~~spdg~~l~v~~~~~-----------------~~~i~v~~~~~~~g~~~~~~~~~~g----------~~~~~~~~spd 316 (361)
T 3scy_A 264 IHLSPDGKYLYASNRLK-----------------ADGVAIFKVDETNGTLTKVGYQLTG----------IHPRNFIITPN 316 (361)
T ss_dssp EEECTTSSEEEEEECSS-----------------SCEEEEEEECTTTCCEEEEEEEECS----------SCCCEEEECTT
T ss_pred EEECCCCCEEEEECCCC-----------------CCEEEEEEEcCCCCcEEEeeEecCC----------CCCceEEECCC
Confidence 78999999987765210 0122344555556765544322110 01235789999
Q ss_pred CCEEEEEEecCCCCcEEEEEECCCCceeEee
Q 005240 438 QLKILTSKESKTEITQYHILSWPLKKSSQIT 468 (706)
Q Consensus 438 g~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt 468 (706)
|++|+++.. ....-.+|.+|+++|+.+.+.
T Consensus 317 g~~l~~~~~-~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 317 GKYLLVACR-DTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp SCEEEEEET-TTTEEEEEEECTTTCCEEECS
T ss_pred CCEEEEEEC-CCCCEEEEEEECCCCcEeecc
Confidence 987776543 333345666788888876664
No 142
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.50 E-value=1e-11 Score=131.64 Aligned_cols=196 Identities=11% Similarity=0.082 Sum_probs=120.7
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc--------------ccccccceEEecC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC--------------LNAVFGSFVWVNN 97 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~--------------~~~~~~~~~wSpD 97 (706)
.+..++|||||++||... + ..+.++++.+++........... ....+..+.||||
T Consensus 66 ~V~~v~fspdg~~la~g~---------~--~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC---------N--KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp CCCEEEECTTSSEEEEEC---------B--SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred EEEEEEECCCCCEEEEEc---------C--CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 578899999999998854 2 34555677766543322111000 0012567899999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc-eecCCC-
Q 005240 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP- 174 (706)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~-~~lt~~- 174 (706)
|++|+..+.+ +.|.++|+ +++. ..+...
T Consensus 135 g~~l~s~~~d-------------------------------------------------~~i~iwd~~~~~~~~~~~~h~ 165 (393)
T 1erj_A 135 GKFLATGAED-------------------------------------------------RLIRIWDIENRKIVMILQGHE 165 (393)
T ss_dssp SSEEEEEETT-------------------------------------------------SCEEEEETTTTEEEEEECCCS
T ss_pred CCEEEEEcCC-------------------------------------------------CeEEEEECCCCcEEEEEccCC
Confidence 9998876421 56777888 4443 334434
Q ss_pred ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeec-CC
Q 005240 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DK 253 (706)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~sp-dg 253 (706)
..+..++|+|||++|+..+.+ ..|.+||+.+++........ .+...+.|+| |+
T Consensus 166 ~~v~~~~~~p~~~~l~s~s~d-------------~~v~iwd~~~~~~~~~~~~~-------------~~v~~~~~~~~~~ 219 (393)
T 1erj_A 166 QDIYSLDYFPSGDKLVSGSGD-------------RTVRIWDLRTGQCSLTLSIE-------------DGVTTVAVSPGDG 219 (393)
T ss_dssp SCEEEEEECTTSSEEEEEETT-------------SEEEEEETTTTEEEEEEECS-------------SCEEEEEECSTTC
T ss_pred CCEEEEEEcCCCCEEEEecCC-------------CcEEEEECCCCeeEEEEEcC-------------CCcEEEEEECCCC
Confidence 678899999999998765543 37999999876544332221 2244678999 77
Q ss_pred CceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-EE-------eecccccccceecCCCceEEEEeeccccceE
Q 005240 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-IL-------HKLDLRFRSVSWCDDSLALVNETWYKTSQTR 325 (706)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l-------~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 325 (706)
+. |+.. ..+ ..|.+||+ .++... .+ ..+...+..+.|+|||+.|+..+. ++.
T Consensus 220 ~~-l~~~-s~d-----------~~v~iwd~---~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~--d~~-- 279 (393)
T 1erj_A 220 KY-IAAG-SLD-----------RAVRVWDS---ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL--DRS-- 279 (393)
T ss_dssp CE-EEEE-ETT-----------SCEEEEET---TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET--TSE--
T ss_pred CE-EEEE-cCC-----------CcEEEEEC---CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC--CCE--
Confidence 64 4422 111 24777887 444432 23 233556788999999998887652 233
Q ss_pred EEEEcCCC
Q 005240 326 TWLVCPGS 333 (706)
Q Consensus 326 l~~~d~~~ 333 (706)
|.++|+.+
T Consensus 280 v~~wd~~~ 287 (393)
T 1erj_A 280 VKLWNLQN 287 (393)
T ss_dssp EEEEEC--
T ss_pred EEEEECCC
Confidence 55555544
No 143
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.50 E-value=6.8e-12 Score=146.34 Aligned_cols=222 Identities=12% Similarity=0.096 Sum_probs=144.9
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceee-cccCCCccccccccceEEecCCcEEEEEecCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~ 110 (706)
.+..++|||||++||.... ...|.++|+.+++..+ +..+.. .+..+.|+|||++|++.+.
T Consensus 15 ~v~~i~~sp~~~~la~~~~----------~g~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~---- 75 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLY----------SGRVEIWNYETQVEVRSIQVTET-----PVRAGKFIARKNWIIVGSD---- 75 (814)
T ss_dssp CEEEEEECSSSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSS-----CEEEEEEEGGGTEEEEEET----
T ss_pred ceEEEEECCCCCEEEEEeC----------CCEEEEEECCCCceEEEEecCCC-----cEEEEEEeCCCCEEEEEeC----
Confidence 4889999999999998752 2578888988776544 332332 2788999999999988742
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-ceEeeeeeCCCCc
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQK 187 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~SpDG~ 187 (706)
.+.|.++++ +|+ ...+... ..+..++|+|||+
T Consensus 76 ---------------------------------------------dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 110 (814)
T 3mkq_A 76 ---------------------------------------------DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP 110 (814)
T ss_dssp ---------------------------------------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS
T ss_pred ---------------------------------------------CCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCC
Confidence 157888888 553 4445444 6789999999999
Q ss_pred EEEEEeeccCcccccccccccceEEEEecCCC-eeE-EcccCCCCCCCCcccCccCCCCcceeeec-CCCceEEEEEecc
Q 005240 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVR-ELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQD 264 (706)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~~sp-dg~~~l~~~~~~~ 264 (706)
+|+..+.. ..|.+|+++++ ... .+.... ..+..+.|+| |+.. |+... .
T Consensus 111 ~l~~~~~d-------------g~i~vw~~~~~~~~~~~~~~~~-------------~~v~~~~~~p~~~~~-l~~~~-~- 161 (814)
T 3mkq_A 111 YVLSGSDD-------------LTVKLWNWENNWALEQTFEGHE-------------HFVMCVAFNPKDPST-FASGC-L- 161 (814)
T ss_dssp EEEEEETT-------------SEEEEEEGGGTSEEEEEEECCS-------------SCEEEEEEETTEEEE-EEEEE-T-
T ss_pred EEEEEcCC-------------CEEEEEECCCCceEEEEEcCCC-------------CcEEEEEEEcCCCCE-EEEEe-C-
Confidence 99866543 37999999854 333 332221 1244789999 6654 44331 1
Q ss_pred CCCCccccCccceeeeecCCCCCCCCc-eEEeec-ccccccceecC--CCceEEEEeeccccceEEEEEcCCCCCCCcee
Q 005240 265 RGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKL-DLRFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (706)
Q Consensus 265 ~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~-~~~~~~~~wsp--Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 340 (706)
.+.|.+||+ .++.. ..+... ...+..+.|+| |+..|+.... ...|.++|+.++ +...
T Consensus 162 ----------dg~v~vwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~--~~~~ 222 (814)
T 3mkq_A 162 ----------DRTVKVWSL---GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTK--SCVA 222 (814)
T ss_dssp ----------TSEEEEEET---TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT----TSEEEEEETTTT--EEEE
T ss_pred ----------CCeEEEEEC---CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC----CCEEEEEECCCC--cEEE
Confidence 124788888 44443 334433 37788899999 8888887642 235777787763 2222
Q ss_pred eecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 341 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 341 l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
........ ...+.|+|+|++|+...
T Consensus 223 ~~~~~~~~------v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 223 TLEGHMSN------VSFAVFHPTLPIIISGS 247 (814)
T ss_dssp EEECCSSC------EEEEEECSSSSEEEEEE
T ss_pred EEcCCCCC------EEEEEEcCCCCEEEEEe
Confidence 22221111 22377899999877654
No 144
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.50 E-value=7.5e-13 Score=134.06 Aligned_cols=127 Identities=17% Similarity=0.171 Sum_probs=97.2
Q ss_pred EEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCC
Q 005240 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (706)
Q Consensus 486 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 565 (706)
.+...||..|.++++.|.+ .+.|+||++||.+.. ... ...++..|+++||.|+..+.+
T Consensus 21 ~~~~~~g~~l~~~~~~~~~------~~~~~vv~~hG~~~~-----------~~~----~~~~~~~l~~~g~~v~~~d~~- 78 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG------TPKALIFVSHGAGEH-----------SGR----YEELARMLMGLDLLVFAHDHV- 78 (303)
T ss_dssp EEECTTSCEEEEEEECCSS------CCSEEEEEECCTTCC-----------GGG----GHHHHHHHHHTTEEEEEECCT-
T ss_pred eEecCCCeEEEEEEeccCC------CCCeEEEEECCCCch-----------hhH----HHHHHHHHHhCCCcEEEeCCC-
Confidence 6777899999999998864 135899999996421 011 124567788899999996665
Q ss_pred cCCCCCCCCc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 566 IIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 566 ~~g~g~~~~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
|+|.+... .......++|+.++++++..+ .+..++.++|||+||++++.++.++|++++++++.+|...
T Consensus 79 --G~G~s~~~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 150 (303)
T 3pe6_A 79 --GHGQSEGERMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVL 150 (303)
T ss_dssp --TSTTSCSSTTCCSSTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSS
T ss_pred --CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECcccc
Confidence 44544322 123456788999999999876 3457999999999999999999999999999999998754
No 145
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.49 E-value=2.4e-11 Score=128.20 Aligned_cols=297 Identities=11% Similarity=0.038 Sum_probs=167.8
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..+.|||||++|+..+. ...|.++|+.+++.......... .+..++|+|||++|+..+.+
T Consensus 68 ~V~~~~~sp~~~~l~s~s~----------D~~v~iWd~~~~~~~~~~~~h~~----~v~~~~~s~~g~~las~~~d---- 129 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQ----------DGRLIVWNALTSQKTHAIKLHCP----WVMECAFAPNGQSVACGGLD---- 129 (380)
T ss_dssp CEEEEEECTTSSCEEEEET----------TSEEEEEETTTTEEEEEEECCCT----TCCCCEECTTSSEEEECCSS----
T ss_pred EEEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCccceEEecCCC----CEEEEEECCCCCEEEEeeCC----
Confidence 5889999999999987643 25777889888765443322221 26788999999998865321
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC------C--Cc-eecCCC-ceEeeee
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD------G--TA-KDFGTP-AVYTAVE 181 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~------g--~~-~~lt~~-~~~~~~~ 181 (706)
..+.++++. + .. +.+... ..+..+.
T Consensus 130 ---------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~ 164 (380)
T 3iz6_a 130 ---------------------------------------------SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQ 164 (380)
T ss_dssp ---------------------------------------------SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCB
T ss_pred ---------------------------------------------CcEEEEECCCCccccCCccceeeccCCCcceEEEE
Confidence 233333441 1 11 122333 5677889
Q ss_pred eCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeec-CCCceEEEE
Q 005240 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWV 260 (706)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~sp-dg~~~l~~~ 260 (706)
|+|++...+++.... ..|.+||+.+++.............. ..+..+.|++ ++.. |+ .
T Consensus 165 ~~~~~~~~l~s~s~D------------~~i~~wd~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~-l~-s 223 (380)
T 3iz6_a 165 YVPDQETRLITGSGD------------QTCVLWDVTTGQRISIFGSEFPSGHT-------ADVLSLSINSLNANM-FI-S 223 (380)
T ss_dssp CCSSSSSCEEEECTT------------SCEEEECTTTCCEEEEECCCSSSSCC-------SCEEEEEECSSSCCE-EE-E
T ss_pred EecCCCCEEEEECCC------------CcEEEEEcCCCcEEEEeecccCCCCc-------cCeEEEEeecCCCCE-EE-E
Confidence 999866544444332 47999999866544332211110000 1233667766 5553 33 2
Q ss_pred EeccCCCCccccCccceeeeecCCCCCCC-CceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCce
Q 005240 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGE-KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (706)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 339 (706)
...+ ..|.+||+. .++ ..+.+..+...+..+.|+|||+.|+..+.+ + .|.++|+.++ +..
T Consensus 224 gs~D-----------~~v~~wd~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D--~--~i~lwd~~~~--~~~ 284 (380)
T 3iz6_a 224 GSCD-----------TTVRLWDLR--ITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDD--G--TCRLFDMRTG--HQL 284 (380)
T ss_dssp EETT-----------SCEEEEETT--TTCCCCEEECCCSSCCCEEEECTTSSEEEEECSS--S--CEEEEETTTT--EEE
T ss_pred EECC-----------CeEEEEECC--CCCcceEEECCcCCCeEEEEEecCCCeEEEEcCC--C--eEEEEECCCC--cEE
Confidence 2111 247788872 132 344555677889999999999988876532 2 3666677663 233
Q ss_pred eeecCcccc-cccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhh
Q 005240 340 VLFDRVFEN-VYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKY 418 (706)
Q Consensus 340 ~l~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 418 (706)
..+...... ....+....+.|+|+|++|+..... ..++.+|..+++.......-
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---------------------g~i~vwd~~~~~~~~~~~~~---- 339 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN---------------------GDCYVWDTLLAEMVLNLGTL---- 339 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT---------------------SCEEEEETTTCCEEEEECCS----
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECC---------------------CCEEEEECCCCceEEEEecc----
Confidence 332221110 0011123457899999988776421 13556676666542221100
Q ss_pred hhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCc
Q 005240 419 FETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (706)
Q Consensus 419 ~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~ 463 (706)
...+........|||||+.|+....+. .|.+|++.+++
T Consensus 340 ---~~~h~~~v~~l~~s~dg~~l~sgs~D~----~i~iW~~~~~~ 377 (380)
T 3iz6_a 340 ---QNSHEGRISCLGLSSDGSALCTGSWDK----NLKIWAFSGHR 377 (380)
T ss_dssp ---CSSCCCCCCEEEECSSSSEEEEECTTS----CEEEEECCSSS
T ss_pred ---cCCCCCceEEEEECCCCCEEEEeeCCC----CEEEEecCCCc
Confidence 001112234578999998776544333 48899887653
No 146
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.49 E-value=1.7e-11 Score=130.87 Aligned_cols=226 Identities=9% Similarity=0.015 Sum_probs=139.9
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeeccc-CCCcc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE-SPDIC 84 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~-~~~~~ 84 (706)
.|+++++.. ++..+. +..........|+|||++||.... ...|.++++++++..++.. +..
T Consensus 79 ~v~i~d~~~----~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~h~~-- 140 (420)
T 3vl1_A 79 HDFLFNTII----RDGSKM--LKRADYTAVDTAKLQMRRFILGTT----------EGDIKVLDSNFNLQREIDQAHVS-- 140 (420)
T ss_dssp EEEEEECCS----EETTTT--SCSCCEEEEEEECSSSCEEEEEET----------TSCEEEECTTSCEEEEETTSSSS--
T ss_pred cEEEEEecc----cceeeE--EecCCceEEEEEecCCCEEEEEEC----------CCCEEEEeCCCcceeeecccccC--
Confidence 567777755 332222 222233445579999999988643 2567778888887766532 222
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
.+..+.|+|||++|+..+. .+.|.++++
T Consensus 141 ---~v~~~~~~~~~~~l~s~s~-------------------------------------------------d~~i~iwd~ 168 (420)
T 3vl1_A 141 ---EITKLKFFPSGEALISSSQ-------------------------------------------------DMQLKIWSV 168 (420)
T ss_dssp ---CEEEEEECTTSSEEEEEET-------------------------------------------------TSEEEEEET
T ss_pred ---ccEEEEECCCCCEEEEEeC-------------------------------------------------CCeEEEEeC
Confidence 3788999999998887642 157888898
Q ss_pred -CC-CceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCc----cc
Q 005240 165 -DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV----CY 237 (706)
Q Consensus 165 -~g-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~----~~ 237 (706)
++ ....+... ..+..++|+|||+.|+..+.. ..|.+||+.+++.............+. +.
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-------------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD-------------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT-------------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC-------------CcEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 55 45555544 678999999999999865543 379999998665443322211100000 00
Q ss_pred --------CccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEee-cccccccceec
Q 005240 238 --------NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHK-LDLRFRSVSWC 307 (706)
Q Consensus 238 --------~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~-~~~~~~~~~ws 307 (706)
.........+.|+|||+. |+... . .+.|.+||+ .+++. ..+.. ....+..+.|+
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~-~-----------dg~i~i~d~---~~~~~~~~~~~~~~~~v~~~~~~ 299 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKY-VIAGH-V-----------SGVITVHNV---FSKEQTIQLPSKFTCSCNSLTVD 299 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEE-EEEEE-T-----------TSCEEEEET---TTCCEEEEECCTTSSCEEEEEEC
T ss_pred cCCcceeeecccCcccceEEcCCCCE-EEEEc-C-----------CCeEEEEEC---CCCceeEEcccccCCCceeEEEe
Confidence 000122446789999986 54321 1 124788888 44443 33332 35678899999
Q ss_pred CCCc-eEEEEeeccccceEEEEEcCCCC
Q 005240 308 DDSL-ALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 308 pDg~-~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
|++. .|+..+ . ...|.++|+.++
T Consensus 300 ~~~~~~l~~g~-~---dg~i~vwd~~~~ 323 (420)
T 3vl1_A 300 GNNANYIYAGY-E---NGMLAQWDLRSP 323 (420)
T ss_dssp SSCTTEEEEEE-T---TSEEEEEETTCT
T ss_pred CCCCCEEEEEe-C---CCeEEEEEcCCC
Confidence 9998 666544 2 235777888775
No 147
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.49 E-value=5.6e-11 Score=121.40 Aligned_cols=278 Identities=11% Similarity=0.109 Sum_probs=165.4
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..++|||||++||.... + ..|.++++.+++..+...... ..+..+.|+|||++|+..+.+
T Consensus 25 ~v~~~~~s~~~~~l~s~~~--------d--g~i~iw~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~~~d---- 86 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSA--------D--KLIKIWGAYDGKFEKTISGHK----LGISDVAWSSDSNLLVSASDD---- 86 (312)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSEEEEEETT----
T ss_pred cEEEEEECCCCCEEEEeeC--------C--CeEEEEeCCCcccchhhccCC----CceEEEEEcCCCCEEEEECCC----
Confidence 5889999999999988653 3 456777887776655433222 137789999999998876421
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-ceEeeeeeCCCCcE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~SpDG~~ 188 (706)
+.|.++++ +++ ...+... ..+..+.|+|+++.
T Consensus 87 ---------------------------------------------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 121 (312)
T 4ery_A 87 ---------------------------------------------KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL 121 (312)
T ss_dssp ---------------------------------------------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred ---------------------------------------------CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 56778888 454 3344434 67889999999999
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCCe-eEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~ 267 (706)
|+..+.. ..|.+||+.+++ .+.+.... ..+..+.|+|+++. |+... .+
T Consensus 122 l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~-l~~~~-~d--- 170 (312)
T 4ery_A 122 IVSGSFD-------------ESVRIWDVKTGKCLKTLPAHS-------------DPVSAVHFNRDGSL-IVSSS-YD--- 170 (312)
T ss_dssp EEEEETT-------------SCEEEEETTTCCEEEEECCCS-------------SCEEEEEECTTSSE-EEEEE-TT---
T ss_pred EEEEeCC-------------CcEEEEECCCCEEEEEecCCC-------------CcEEEEEEcCCCCE-EEEEe-CC---
Confidence 8765543 379999998554 33433221 11447899999985 44331 11
Q ss_pred CccccCccceeeeecCCCCCCCCc-eEEe-ecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCc
Q 005240 268 ANVEVSPRDIIYTQPAEPAEGEKP-EILH-KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 345 (706)
Q Consensus 268 ~~~~~~~~~~l~~~d~~~~~~~~~-~~l~-~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~ 345 (706)
+.|.++|+ ..++. ..+. .....+..+.|+|+++.|+..+. ...|.++|+.++ +....+...
T Consensus 171 --------~~i~~wd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~--~~~~~~~~~ 233 (312)
T 4ery_A 171 --------GLCRIWDT---ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL----DNTLKLWDYSKG--KCLKTYTGH 233 (312)
T ss_dssp --------SCEEEEET---TTCCEEEEECCSSCCCEEEEEECTTSSEEEEEET----TTEEEEEETTTT--EEEEEECSS
T ss_pred --------CcEEEEEC---CCCceeeEEeccCCCceEEEEECCCCCEEEEEcC----CCeEEEEECCCC--cEEEEEEec
Confidence 24778888 44443 2332 23445677899999999887652 235777787763 222222211
Q ss_pred ccccccCCCCCceEec-cCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhh
Q 005240 346 FENVYSDPGSPMMTRT-STGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 424 (706)
Q Consensus 346 ~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 424 (706)
.... ......++ +++++|+.... ...+..+|+.+++..+......
T Consensus 234 ~~~~----~~~~~~~~~~~~~~l~sg~~---------------------dg~i~vwd~~~~~~~~~~~~h~--------- 279 (312)
T 4ery_A 234 KNEK----YCIFANFSVTGGKWIVSGSE---------------------DNLVYIWNLQTKEIVQKLQGHT--------- 279 (312)
T ss_dssp CCSS----SCCCEEEECSSSCEEEECCT---------------------TSCEEEEETTTCCEEEEECCCS---------
T ss_pred CCce----EEEEEEEEeCCCcEEEEECC---------------------CCEEEEEECCCchhhhhhhccC---------
Confidence 1100 01112233 55665544321 1136667877776544433321
Q ss_pred hccCCCceecccCCCEEEEEEecCCCCcEEEEEE
Q 005240 425 LVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (706)
Q Consensus 425 ~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~ 458 (706)
.......|+|+++.++....+.. ..|.+|+
T Consensus 280 --~~v~~~~~~p~~~~l~s~~~~~d--~~i~~W~ 309 (312)
T 4ery_A 280 --DVVISTACHPTENIIASAALEND--KTIKLWK 309 (312)
T ss_dssp --SCEEEEEECSSSSEEEEEECTTT--CCEEEEE
T ss_pred --CcEEEEeecCcCCceEEEEccCC--ccEEEec
Confidence 11234689999987765432222 2355554
No 148
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.49 E-value=2.7e-11 Score=126.36 Aligned_cols=268 Identities=10% Similarity=0.082 Sum_probs=157.9
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..+.|||||++||..+. + ..|.++|..+++.......... .+..+.|+|||+.|+....+
T Consensus 66 ~V~~~~~s~d~~~l~s~s~--------D--g~v~vWd~~~~~~~~~~~~~~~----~v~~~~~sp~g~~lasg~~d---- 127 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQ--------D--GKVIVWDSFTTNKEHAVTMPCT----WVMACAYAPSGCAIACGGLD---- 127 (354)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SEEEEEETTTCCEEEEEECSSS----CCCEEEECTTSSEEEEESTT----
T ss_pred eEEEEEECCCCCEEEEEeC--------C--CeEEEEECCCCCcceEEecCCC----CEEEEEECCCCCEEEEeeCC----
Confidence 4889999999999987643 3 4677778877665443322221 26788999999998876421
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC--C------CceecCCC-ceEeeeee
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD--G------TAKDFGTP-AVYTAVEP 182 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~--g------~~~~lt~~-~~~~~~~~ 182 (706)
+.+.++++. . ....+... ..+..+.|
T Consensus 128 ---------------------------------------------~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 162 (354)
T 2pbi_B 128 ---------------------------------------------NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF 162 (354)
T ss_dssp ---------------------------------------------SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE
T ss_pred ---------------------------------------------CCEEEEEEeccccccccccceeeeccCCcEEEEEE
Confidence 233334431 1 11122222 56789999
Q ss_pred CCCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecC--CCceEEE
Q 005240 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRAD--KPSTLYW 259 (706)
Q Consensus 183 SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spd--g~~~l~~ 259 (706)
+|+++.|+..+.+ ..|.+||+.+++. +.+..+. ..+..+.|+|+ |+. |+
T Consensus 163 ~~~~~~l~t~s~D-------------~~v~lwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~g~~-l~- 214 (354)
T 2pbi_B 163 TNSDMQILTASGD-------------GTCALWDVESGQLLQSFHGHG-------------ADVLCLDLAPSETGNT-FV- 214 (354)
T ss_dssp CSSSSEEEEEETT-------------SEEEEEETTTCCEEEEEECCS-------------SCEEEEEECCCSSCCE-EE-
T ss_pred eCCCCEEEEEeCC-------------CcEEEEeCCCCeEEEEEcCCC-------------CCeEEEEEEeCCCCCE-EE-
Confidence 9999998865543 3799999986654 3333221 11335567664 443 43
Q ss_pred EEeccCCCCccccCccceeeeecCCCCCCCCce-EEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCc
Q 005240 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (706)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 338 (706)
....+ ..|.+||+ .+++.. .+..+...+..+.|+|++..|+..+.+ +. |.++|+.+. ..
T Consensus 215 sgs~D-----------g~v~~wd~---~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D--~~--v~lwd~~~~--~~ 274 (354)
T 2pbi_B 215 SGGCD-----------KKAMVWDM---RSGQCVQAFETHESDVNSVRYYPSGDAFASGSDD--AT--CRLYDLRAD--RE 274 (354)
T ss_dssp EEETT-----------SCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT--SC--EEEEETTTT--EE
T ss_pred EEeCC-----------CeEEEEEC---CCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCC--Ce--EEEEECCCC--cE
Confidence 32211 24788888 455543 344567788899999999988876532 33 555566653 22
Q ss_pred eeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhh
Q 005240 339 RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKY 418 (706)
Q Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 418 (706)
..++..... ..+...+.|+|+|++|+..... ..+..+|+.+++.........
T Consensus 275 ~~~~~~~~~----~~~~~~~~~s~~g~~l~~g~~d---------------------~~i~vwd~~~~~~~~~l~~h~--- 326 (354)
T 2pbi_B 275 VAIYSKESI----IFGASSVDFSLSGRLLFAGYND---------------------YTINVWDVLKGSRVSILFGHE--- 326 (354)
T ss_dssp EEEECCTTC----CSCEEEEEECTTSSEEEEEETT---------------------SCEEEEETTTCSEEEEECCCS---
T ss_pred EEEEcCCCc----ccceeEEEEeCCCCEEEEEECC---------------------CcEEEEECCCCceEEEEECCC---
Confidence 222221100 0012246789999988776421 135567776665433322211
Q ss_pred hhhhhhhccCCCceecccCCCEEEEEEe
Q 005240 419 FETAVALVFGQGEEDINLNQLKILTSKE 446 (706)
Q Consensus 419 ~~~~~~~~~~~~~~~~s~Dg~~l~~~~~ 446 (706)
.......|||||+.|+....
T Consensus 327 --------~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 327 --------NRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp --------SCEEEEEECTTSSCEEEEET
T ss_pred --------CcEEEEEECCCCCEEEEEcC
Confidence 12235789999987775443
No 149
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.48 E-value=2.4e-13 Score=143.75 Aligned_cols=152 Identities=11% Similarity=0.044 Sum_probs=106.3
Q ss_pred CCCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCC-------CcCCCCchHHHH
Q 005240 478 ASLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN-------EFSGMTPTSSLI 550 (706)
Q Consensus 478 ~~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 550 (706)
..+..+.+++.+.+|..++++++.|++. .+|+|+||++||.+... ......+. .+......+++.
T Consensus 83 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~----~~~~P~Vl~~HG~g~~~----~~~~~~~~~~~~~~~~y~~~~~~~a~~ 154 (391)
T 3g8y_A 83 EGYILEKWEFYPFPKSVSTFLVLKPEHL----KGAVPGVLCIPGSGRTK----EGLVGEPGICDKLTEDYNNPKVSMALN 154 (391)
T ss_dssp TTEEEEEEEECCSTTCCEEEEEEEETTC----CSCEEEEEEECCTTCCH----HHHTTCCCSSGGGCCCTTSTTTCHHHH
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEeCCCC----CCCCCEEEEeCCCCCCc----hhhccccccccccchhhcchHHHHHHH
Confidence 4467788999999999999999999863 23689999999964211 00000000 000001146788
Q ss_pred HHHCCeEEEEcCCCCcCCCCCCC-------Cch------------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEech
Q 005240 551 FLARRFAVLAGPSIPIIGEGDKL-------PND------------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSY 611 (706)
Q Consensus 551 l~~~G~~v~~~~~~~~~g~g~~~-------~~~------------~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~ 611 (706)
|+++||+|+.++.+|....+... ... .+....+.|+.++++||.+++.+|++||+|+|+||
T Consensus 155 la~~G~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~ 234 (391)
T 3g8y_A 155 MVKEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSL 234 (391)
T ss_dssp HHTTTCEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGG
T ss_pred HHHCCCEEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEECh
Confidence 99999999998876543222110 000 11223358999999999999889999999999999
Q ss_pred HHHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 612 GAFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 612 GG~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
||++|++++.+. ++++|+|+.+++..
T Consensus 235 GG~~al~~a~~~-~~i~a~v~~~~~~~ 260 (391)
T 3g8y_A 235 GTEPMMVLGVLD-KDIYAFVYNDFLCQ 260 (391)
T ss_dssp GHHHHHHHHHHC-TTCCEEEEESCBCC
T ss_pred hHHHHHHHHHcC-CceeEEEEccCCCC
Confidence 999999999887 68899887765543
No 150
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.48 E-value=1.3e-12 Score=126.90 Aligned_cols=161 Identities=15% Similarity=0.072 Sum_probs=113.7
Q ss_pred CceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCC---------chhhHHHH
Q 005240 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP---------NDRFVEQL 582 (706)
Q Consensus 512 ~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~---------~~~~~~~~ 582 (706)
+.|+||++||.+.. .. .....+..|++ ||.|+.++. ...|+|.+.. ........
T Consensus 37 ~~~~vv~~HG~~~~-----------~~----~~~~~~~~l~~-g~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~ 99 (226)
T 2h1i_A 37 SKPVLLLLHGTGGN-----------EL----DLLPLAEIVDS-EASVLSVRG-NVLENGMPRFFRRLAEGIFDEEDLIFR 99 (226)
T ss_dssp TSCEEEEECCTTCC-----------TT----TTHHHHHHHHT-TSCEEEECC-SEEETTEEESSCEEETTEECHHHHHHH
T ss_pred CCcEEEEEecCCCC-----------hh----HHHHHHHHhcc-CceEEEecC-cccCCcchhhccccCccCcChhhHHHH
Confidence 46899999997421 01 11234556666 999988632 2223332210 11223344
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC--------CCcc---------
Q 005240 583 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--------TPFG--------- 645 (706)
Q Consensus 583 ~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~--------~~~~--------- 645 (706)
+.++.+.++++.++..+|+.+|+++|+|+||++++.++.++|++++++++.+|...... .|..
T Consensus 100 ~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~p~l~~~G~~D~~ 179 (226)
T 2h1i_A 100 TKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGMQLANLAGKSVFIAAGTNDPI 179 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSCCCCCCTTCEEEEEEESSCSS
T ss_pred HHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCccccccccCCcEEEEeCCCCCc
Confidence 66677777777777668899999999999999999999999999999999999865331 1110
Q ss_pred c---hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHh
Q 005240 646 F---QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 695 (706)
Q Consensus 646 ~---~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l 695 (706)
. ..+++++.|...+.++++ ++|+++|.+. .+..+.+.+||+++|
T Consensus 180 ~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 180 CSSAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWYDKAF 226 (226)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHHHHhC
Confidence 1 234888999988889999 9999999884 356788999998865
No 151
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.48 E-value=1.8e-11 Score=130.50 Aligned_cols=275 Identities=11% Similarity=0.099 Sum_probs=165.3
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..+.||||++.|+..+. + ..|.++|+++++..+....... .+..+.|+|||++|+..+.+
T Consensus 110 ~V~~~~~~p~~~~l~s~s~--------D--g~i~vwd~~~~~~~~~l~~h~~----~V~~v~~~~~~~~l~sgs~D---- 171 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASE--------D--ATIKVWDYETGDFERTLKGHTD----SVQDISFDHSGKLLASCSAD---- 171 (410)
T ss_dssp CEEEEEECSSSSEEEEEES--------S--SCEEEEETTTCCCCEEECCCSS----CEEEEEECTTSSEEEEEETT----
T ss_pred cEEEEEEcCCCCEEEEEeC--------C--CeEEEEECCCCcEEEEEeccCC----cEEEEEEcCCCCEEEEEeCC----
Confidence 4778899999999887643 2 4677788888775544322221 27789999999988876431
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-Cc-eecCCC-ceEeeeeeCCCCcE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TA-KDFGTP-AVYTAVEPSPDQKY 188 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~-~~lt~~-~~~~~~~~SpDG~~ 188 (706)
+.|.++|+.+ +. +.+... ..+..++|+|||++
T Consensus 172 ---------------------------------------------~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 206 (410)
T 1vyh_C 172 ---------------------------------------------MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDH 206 (410)
T ss_dssp ---------------------------------------------SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSE
T ss_pred ---------------------------------------------CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCE
Confidence 3455567743 43 333333 67889999999999
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCCe-eEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~ 267 (706)
|+..+.+ ..|.+||+.++. .+.+.... ..+..+.|+|||+. |+-. ..+
T Consensus 207 l~s~s~D-------------~~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~~~~g~~-l~s~-s~D--- 255 (410)
T 1vyh_C 207 IVSASRD-------------KTIKMWEVQTGYCVKTFTGHR-------------EWVRMVRPNQDGTL-IASC-SND--- 255 (410)
T ss_dssp EEEEETT-------------SEEEEEETTTCCEEEEEECCS-------------SCEEEEEECTTSSE-EEEE-ETT---
T ss_pred EEEEeCC-------------CeEEEEECCCCcEEEEEeCCC-------------ccEEEEEECCCCCE-EEEE-cCC---
Confidence 8765543 379999998554 34443221 12446789999985 4422 111
Q ss_pred CccccCccceeeeecCCCCCCCCce-EEeecccccccceecCC--------------------CceEEEEeeccccceEE
Q 005240 268 ANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDD--------------------SLALVNETWYKTSQTRT 326 (706)
Q Consensus 268 ~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~~~~wspD--------------------g~~l~~~~~~~~~~~~l 326 (706)
..|.+||+ .+++.. .+..+...+..+.|+|+ |..|+..+. ...|
T Consensus 256 --------~~v~vwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~----D~~i 320 (410)
T 1vyh_C 256 --------QTVRVWVV---ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR----DKTI 320 (410)
T ss_dssp --------SCEEEEET---TTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET----TSEE
T ss_pred --------CeEEEEEC---CCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC----CCeE
Confidence 24778887 444433 34456677888899997 445555442 2347
Q ss_pred EEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCc
Q 005240 327 WLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS 406 (706)
Q Consensus 327 ~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~ 406 (706)
.++|+.++ .....+...-.. ...+.|+|+|++|+....+ + .|..+|+.+++
T Consensus 321 ~iwd~~~~--~~~~~~~~h~~~------v~~v~~~~~g~~l~s~s~D----~-----------------~i~vwd~~~~~ 371 (410)
T 1vyh_C 321 KMWDVSTG--MCLMTLVGHDNW------VRGVLFHSGGKFILSCADD----K-----------------TLRVWDYKNKR 371 (410)
T ss_dssp EEEETTTT--EEEEEEECCSSC------EEEEEECSSSSCEEEEETT----T-----------------EEEEECCTTSC
T ss_pred EEEECCCC--ceEEEEECCCCc------EEEEEEcCCCCEEEEEeCC----C-----------------eEEEEECCCCc
Confidence 77787764 222222211111 1236789999988765421 1 35556666665
Q ss_pred eeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEEC
Q 005240 407 KERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSW 459 (706)
Q Consensus 407 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~ 459 (706)
......... .......|+|++..|+....+. .|.+|++
T Consensus 372 ~~~~~~~h~-----------~~v~~l~~~~~~~~l~sgs~D~----~i~vW~~ 409 (410)
T 1vyh_C 372 CMKTLNAHE-----------HFVTSLDFHKTAPYVVTGSVDQ----TVKVWEC 409 (410)
T ss_dssp CCEEEECCS-----------SCEEEEEECSSSSCEEEEETTS----EEEEEC-
T ss_pred eEEEEcCCC-----------CcEEEEEEcCCCCEEEEEeCCC----cEEEEeC
Confidence 433322211 1123568999998776543332 4666653
No 152
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.47 E-value=5.2e-12 Score=134.93 Aligned_cols=221 Identities=8% Similarity=-0.004 Sum_probs=137.9
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~ 112 (706)
...++|||||++|+.... + ..++++++.+++..+...... ......|+|||++|+..+.+
T Consensus 59 ~~~~~~s~~g~~l~~~~~--------d--~~v~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~d----- 118 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARL--------D--GHDFLFNTIIRDGSKMLKRAD-----YTAVDTAKLQMRRFILGTTE----- 118 (420)
T ss_dssp CTTCEEEEEETTEEEEEE--------T--TEEEEEECCSEETTTTSCSCC-----EEEEEEECSSSCEEEEEETT-----
T ss_pred ccceeeeecCCeEEEEEc--------C--CcEEEEEecccceeeEEecCC-----ceEEEEEecCCCEEEEEECC-----
Confidence 447899999999988753 2 578888888776554433222 13455789999998876421
Q ss_pred CCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceec-CCC-ceEeeeeeCCCCcEE
Q 005240 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDF-GTP-AVYTAVEPSPDQKYV 189 (706)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~l-t~~-~~~~~~~~SpDG~~i 189 (706)
+.|.++++ +++.... ... ..+..++|+|||+.|
T Consensus 119 --------------------------------------------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 154 (420)
T 3vl1_A 119 --------------------------------------------GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEAL 154 (420)
T ss_dssp --------------------------------------------SCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEE
T ss_pred --------------------------------------------CCEEEEeCCCcceeeecccccCccEEEEECCCCCEE
Confidence 56777888 4444444 333 788999999999988
Q ss_pred EEEeeccCcccccccccccceEEEEecCCC-eeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCC
Q 005240 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (706)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~ 268 (706)
+..+.. ..|.+|++..+ ..+.+.... ..+..+.|+||++. |+... .+
T Consensus 155 ~s~s~d-------------~~i~iwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~-l~s~~-~d---- 202 (420)
T 3vl1_A 155 ISSSQD-------------MQLKIWSVKDGSNPRTLIGHR-------------ATVTDIAIIDRGRN-VLSAS-LD---- 202 (420)
T ss_dssp EEEETT-------------SEEEEEETTTCCCCEEEECCS-------------SCEEEEEEETTTTE-EEEEE-TT----
T ss_pred EEEeCC-------------CeEEEEeCCCCcCceEEcCCC-------------CcEEEEEEcCCCCE-EEEEc-CC----
Confidence 765543 37999999854 344443222 22457899999986 55332 11
Q ss_pred ccccCccceeeeecCCCCCCCCceEEee-------------------------cccccccceecCCCceEEEEeeccccc
Q 005240 269 NVEVSPRDIIYTQPAEPAEGEKPEILHK-------------------------LDLRFRSVSWCDDSLALVNETWYKTSQ 323 (706)
Q Consensus 269 ~~~~~~~~~l~~~d~~~~~~~~~~~l~~-------------------------~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (706)
..|.+||+ .+++...... ....+..+.|+|||+.|+.... .
T Consensus 203 -------~~v~iwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d 268 (420)
T 3vl1_A 203 -------GTIRLWEC---GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV----S 268 (420)
T ss_dssp -------SCEEEEET---TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET----T
T ss_pred -------CcEEEeEC---CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC----C
Confidence 23667777 4333322221 1245667889999999887652 2
Q ss_pred eEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCC-EEEEe
Q 005240 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGT-NVIAK 370 (706)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~ 370 (706)
..|.++|+.+++ ....+...... ....+.|+|+|+ +|+..
T Consensus 269 g~i~i~d~~~~~-~~~~~~~~~~~------~v~~~~~~~~~~~~l~~g 309 (420)
T 3vl1_A 269 GVITVHNVFSKE-QTIQLPSKFTC------SCNSLTVDGNNANYIYAG 309 (420)
T ss_dssp SCEEEEETTTCC-EEEEECCTTSS------CEEEEEECSSCTTEEEEE
T ss_pred CeEEEEECCCCc-eeEEcccccCC------CceeEEEeCCCCCEEEEE
Confidence 236777777642 12222111111 122477899999 55544
No 153
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.47 E-value=2.1e-13 Score=149.12 Aligned_cols=152 Identities=14% Similarity=0.137 Sum_probs=108.9
Q ss_pred CCceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCC--------CCcCCCCchHHHH
Q 005240 479 SLQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSP--------NEFSGMTPTSSLI 550 (706)
Q Consensus 479 ~~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 550 (706)
.+..+.+.++..||..|.+.+|+|++ .+|+|+||+.||-+...+.....+...| ..+..+....++.
T Consensus 38 ~~~~~~v~i~~~DG~~L~a~l~~P~~-----~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 112 (560)
T 3iii_A 38 MIMEKDGTVEMRDGEKLYINIFRPNK-----DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGF 112 (560)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEECSS-----SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHH
T ss_pred eEEEEEEEEECCCCcEEEEEEEecCC-----CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHH
Confidence 45678899999999999999999985 2369999999864221100000000000 0000000013688
Q ss_pred HHHCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEE
Q 005240 551 FLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 630 (706)
Q Consensus 551 l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~ 630 (706)
|+++||+|+..+.||..+.+-.+ ..+.....+|+.++++||.+++++| .||+++|+||||++++.++++.|+.++|+
T Consensus 113 la~~Gy~vv~~D~RG~G~S~G~~--~~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~ai 189 (560)
T 3iii_A 113 WVPNDYVVVKVALRGSDKSKGVL--SPWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAM 189 (560)
T ss_dssp HGGGTCEEEEEECTTSTTCCSCB--CTTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEE
T ss_pred HHhCCCEEEEEcCCCCCCCCCcc--ccCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEE
Confidence 99999999997777553332222 2344567899999999999988887 89999999999999999999999999999
Q ss_pred EeccCCCC
Q 005240 631 IARSGSYN 638 (706)
Q Consensus 631 v~~~~~~d 638 (706)
|+.+|+.|
T Consensus 190 v~~~~~~d 197 (560)
T 3iii_A 190 IPWEGLND 197 (560)
T ss_dssp EEESCCCB
T ss_pred EecCCccc
Confidence 99999876
No 154
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.47 E-value=1.9e-12 Score=125.75 Aligned_cols=162 Identities=15% Similarity=0.122 Sum_probs=117.7
Q ss_pred CceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH--CCeEEEEcCCC----------------CcCCCCCCC
Q 005240 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA--RRFAVLAGPSI----------------PIIGEGDKL 573 (706)
Q Consensus 512 ~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~~----------------~~~g~g~~~ 573 (706)
+.|+||++||.+.. ... ....+..|++ .||.|+.++.. ..+|+|...
T Consensus 23 ~~~~vv~lHG~~~~-----------~~~----~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~ 87 (226)
T 3cn9_A 23 ADACIIWLHGLGAD-----------RTD----FKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR 87 (226)
T ss_dssp CCEEEEEECCTTCC-----------GGG----GHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT
T ss_pred CCCEEEEEecCCCC-----------hHH----HHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc
Confidence 57999999997421 011 1245567777 99999996654 223444332
Q ss_pred C-chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHH-hCCCceeEEEeccCCCCCCC----------
Q 005240 574 P-NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGSYNKTL---------- 641 (706)
Q Consensus 574 ~-~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~-~~p~~~~a~v~~~~~~d~~~---------- 641 (706)
. ........++|+..+++++.+ ..+|+++|+++|+|+||++++.++. ++|++++++++.+|..+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 166 (226)
T 3cn9_A 88 AIDEDQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDLALDERHKR 166 (226)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGCCCCTGGGG
T ss_pred cccchhHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhhhhcccccC
Confidence 2 223455667888888888776 3478889999999999999999999 99999999999998765311
Q ss_pred CCcc------------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHh
Q 005240 642 TPFG------------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 695 (706)
Q Consensus 642 ~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l 695 (706)
.|.. -..+++++.|...+.++++++++ ++|.+. .+..+.+.+||+++|
T Consensus 167 ~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~-----~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 167 IPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVS-----LEEIHDIGAWLRKRL 226 (226)
T ss_dssp CCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCC-----HHHHHHHHHHHHHHC
T ss_pred CCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcc-----hhhHHHHHHHHHhhC
Confidence 1211 12348899999999899999999 999875 245678999999875
No 155
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.47 E-value=7.1e-14 Score=140.33 Aligned_cols=193 Identities=12% Similarity=0.018 Sum_probs=119.6
Q ss_pred CCceEEEEEEccC-CeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCe
Q 005240 479 SLQKEMIKYQRKD-GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRF 556 (706)
Q Consensus 479 ~~~~~~~~~~~~d-g~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~ 556 (706)
....+.+++.+.. +.++..++|+|+++++.+ +||+|++.||+. ... . ......+.|++ .+.
T Consensus 10 ~~~~~~~~~~S~~~~~~~~~~vylP~~y~~~~--~yPvly~l~G~~---------~~~---~---~~~~~~~~l~~~~~~ 72 (278)
T 2gzs_A 10 FYHFSATSFDSVDGTRHYRVWTAVPNTTAPAS--GYPILYMLDGNA---------VMD---R---LDDELLKQLSEKTPP 72 (278)
T ss_dssp SEEEEEEEEECTTSSCEEEEEEEEESSCCCTT--CEEEEEESSHHH---------HHH---H---CCHHHHHHHTTSCCC
T ss_pred CCceEEEEEEcCCCCceEEEEEECCCCCCCCC--CCCEEEEeeChh---------HHH---H---HHHHHHHHhccCCCe
Confidence 3467888888875 689999999999987644 599876666642 100 0 01123345555 566
Q ss_pred EEEEcCCCCcC-----CCCCCCCc-----------------hhhHHHHHHHHH-HHHHHHHHcCCCCCCcEEEEEechHH
Q 005240 557 AVLAGPSIPII-----GEGDKLPN-----------------DRFVEQLVSSAE-AAVEEVVRRGVADPSRIAVGGHSYGA 613 (706)
Q Consensus 557 ~v~~~~~~~~~-----g~g~~~~~-----------------~~~~~~~~~D~~-~~~~~l~~~~~id~~~i~i~G~S~GG 613 (706)
+|+.+.+.+.. +++..+.. ........+-+. ..+.++.++..+|++|++|+|+||||
T Consensus 73 ivV~v~~~~~~~~~~~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG 152 (278)
T 2gzs_A 73 VIVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGG 152 (278)
T ss_dssp EEEEEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHH
T ss_pred EEEEEcCCCCCcCcccccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHH
Confidence 66643322110 00000000 000111111111 23344444455899999999999999
Q ss_pred HHHHHHHHhCCCceeEEEeccCCCCCCC-----------------CCc--------------------cchHHHHHHHHH
Q 005240 614 FMTAHLLAHAPHLFCCGIARSGSYNKTL-----------------TPF--------------------GFQAERFFDALK 656 (706)
Q Consensus 614 ~~a~~~~~~~p~~~~a~v~~~~~~d~~~-----------------~~~--------------------~~~~~~~~~~l~ 656 (706)
++|++++.+ |++|+++++.+|...+.. .+. .-+.++++++|+
T Consensus 153 ~~a~~~~~~-p~~f~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~L~ 231 (278)
T 2gzs_A 153 LFVLDSWLS-SSYFRSYYSASPSLGRGYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILK 231 (278)
T ss_dssp HHHHHHHHH-CSSCSEEEEESGGGSTTHHHHHHHHHTSCTTTTTTCEEEEEECCC-----------CHHHHHHHHHHHHH
T ss_pred HHHHHHHhC-ccccCeEEEeCcchhcCcchHHHHHHHhhccCCCCCcEEEEecCccccccccchhhhhHHHHHHHHHHHH
Confidence 999999999 999999999998754320 000 012348999999
Q ss_pred hCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 005240 657 GHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 693 (706)
Q Consensus 657 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~ 693 (706)
+.|+++++.+|||++|.+.. + ..+...++||.+
T Consensus 232 ~~g~~~~~~~~~g~~H~~~~---~-~~~~~~l~fl~~ 264 (278)
T 2gzs_A 232 DKGVNAVFWDFPNLGHGPMF---N-ASFRQALLDISG 264 (278)
T ss_dssp HTTCCEEEEECTTCCHHHHH---H-HHHHHHHHHHTT
T ss_pred cCCCeeEEEEcCCCCccchh---H-HHHHHHHHHHhh
Confidence 99999999999999998542 2 223445667665
No 156
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.47 E-value=3.2e-11 Score=128.20 Aligned_cols=249 Identities=11% Similarity=0.109 Sum_probs=159.9
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
..|+|+++.. |+...+........+..++|||||+.|+.... ...|.++++.+++..+.......
T Consensus 113 ~~v~lw~~~~----~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~- 177 (401)
T 4aez_A 113 RNVYVWNADS----GSVSALAETDESTYVASVKWSHDGSFLSVGLG----------NGLVDIYDVESQTKLRTMAGHQA- 177 (401)
T ss_dssp TEEEEEETTT----CCEEEEEECCTTCCEEEEEECTTSSEEEEEET----------TSCEEEEETTTCCEEEEECCCSS-
T ss_pred CeEEEeeCCC----CcEeEeeecCCCCCEEEEEECCCCCEEEEECC----------CCeEEEEECcCCeEEEEecCCCC-
Confidence 4688999977 77776665544556889999999999988653 24677888887765544322211
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
.+..+.| +++.|+..+. .+.|.++++
T Consensus 178 ---~v~~~~~--~~~~l~~~~~-------------------------------------------------dg~i~i~d~ 203 (401)
T 4aez_A 178 ---RVGCLSW--NRHVLSSGSR-------------------------------------------------SGAIHHHDV 203 (401)
T ss_dssp ---CEEEEEE--ETTEEEEEET-------------------------------------------------TSEEEEEET
T ss_pred ---ceEEEEE--CCCEEEEEcC-------------------------------------------------CCCEEEEec
Confidence 2667788 5566666532 157778888
Q ss_pred C-C-C-ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeE-EcccCCCCCCCCcccCc
Q 005240 165 D-G-T-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNS 239 (706)
Q Consensus 165 ~-g-~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~~p~~~~~ 239 (706)
. + . ...+... ..+..++|+|||+.|+..+.. ..|.+||+..++.. .+....
T Consensus 204 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------------~~v~iwd~~~~~~~~~~~~~~----------- 259 (401)
T 4aez_A 204 RIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND-------------NVVQIWDARSSIPKFTKTNHN----------- 259 (401)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTCSSEEEEECCCS-----------
T ss_pred ccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC-------------CeEEEccCCCCCccEEecCCc-----------
Confidence 4 3 2 3344433 678899999999999876544 37999999865443 332221
Q ss_pred cCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeec
Q 005240 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWY 319 (706)
Q Consensus 240 ~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~ 319 (706)
..+..+.|+|++.. ++.... +. ....|.+||+ .+++..........+..+.|+|+++.|+.....
T Consensus 260 --~~v~~~~~~p~~~~-ll~~~~--gs-------~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~ 324 (401)
T 4aez_A 260 --AAVKAVAWCPWQSN-LLATGG--GT-------MDKQIHFWNA---ATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGF 324 (401)
T ss_dssp --SCCCEEEECTTSTT-EEEEEC--CT-------TTCEEEEEET---TTCCEEEEEECSSCEEEEEECSSSSEEEEEECT
T ss_pred --ceEEEEEECCCCCC-EEEEec--CC-------CCCEEEEEEC---CCCCEEEEEeCCCcEEEEEECCCCCeEEEEeec
Confidence 22458899999988 543321 00 1235888998 566655555566788999999999999886422
Q ss_pred cccceEEEEEcCCCCCCCceee--ecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 320 KTSQTRTWLVCPGSKDVAPRVL--FDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 320 ~~~~~~l~~~d~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
.++ .|.++++.++ +...+ .... ......+.|+|||++|+...
T Consensus 325 ~dg--~i~v~~~~~~--~~~~~~~~~~h------~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 325 PDN--NLSIWSYSSS--GLTKQVDIPAH------DTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp TTC--EEEEEEEETT--EEEEEEEEECC------SSCCCEEEECTTSSEEEEEC
T ss_pred CCC--cEEEEecCCc--cceeEEEecCC------CCCEEEEEECCCCCEEEEEe
Confidence 333 4555555553 12222 1111 11233478999999887764
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.47 E-value=9.2e-12 Score=130.57 Aligned_cols=275 Identities=9% Similarity=-0.027 Sum_probs=142.4
Q ss_pred ceeEeecCCCCCCCCeeeeecCC--CCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcC-CCceeecccCCC
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYP--DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE-TGEAKPLFESPD 82 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~-~g~~~~lt~~~~ 82 (706)
+|++.+++. +.|+.+.+...+ .......++|||||++|+.+. .+ .|.+++++ +|+..++.....
T Consensus 15 ~i~~~~~d~--~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~---------~~--~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 15 AIFTVQFDD--EKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA---------MK--KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEEEET--TTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE---------BT--EEEEEEEEETTEEEEEEEEEC
T ss_pred cEEEEEEEC--CCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEc---------cc--eEEEEEECCCCCEEEeeEeec
Confidence 578877765 457766665332 223577899999999886543 22 67777765 676655432211
Q ss_pred ccccccccceEEecCCcEE-EEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 83 ICLNAVFGSFVWVNNSTLL-IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 83 ~~~~~~~~~~~wSpDg~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
. ..+..+.|||||++| ++.... ... . .|... .+..+ +...+|.
T Consensus 82 ~---g~~~~~~~spdg~~l~~~~~~~--~~~-----------~------------~~~~~-~~~~~-------g~v~v~~ 125 (365)
T 1jof_A 82 G---GHPRANDADTNTRAIFLLAAKQ--PPY-----------A------------VYANP-FYKFA-------GYGNVFS 125 (365)
T ss_dssp C---SSGGGGCTTSCCEEEEEEECSS--TTC-----------C------------EEEEE-ESSSC-------CEEEEEE
T ss_pred C---CCCccEEECCCCCEEEEEEecC--Ccc-----------e------------eccce-eecCC-------ceEEEEc
Confidence 0 014568999999964 344320 000 0 00000 00000 1123444
Q ss_pred EccCCCce-ecC-----CCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC-CCeeEEcccCCCCCCCC
Q 005240 162 GSLDGTAK-DFG-----TPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAEDIP 234 (706)
Q Consensus 162 ~~l~g~~~-~lt-----~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~~~~~p 234 (706)
++.+|+.. .+. .......++|||||++|++.... ...|++|+++ +++.+.+.......
T Consensus 126 ~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~------------~~~v~~~~~~~~g~~~~~~~~~~~~--- 190 (365)
T 1jof_A 126 VSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT------------ANKLWTHRKLASGEVELVGSVDAPD--- 190 (365)
T ss_dssp ECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT------------TTEEEEEEECTTSCEEEEEEEECSS---
T ss_pred cCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC------------CCEEEEEEECCCCCEEEeeeEecCC---
Confidence 44356432 222 22567889999999998755422 2479999998 66554432211000
Q ss_pred cccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce----EEeecc----c-------
Q 005240 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE----ILHKLD----L------- 299 (706)
Q Consensus 235 ~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~----~l~~~~----~------- 299 (706)
...+++.++|||||+. ||... ... +.+.+++.++ ++++.. .+...+ +
T Consensus 191 -----~g~~p~~~~~spdg~~-l~v~~-~~~----------~~v~v~~~~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 252 (365)
T 1jof_A 191 -----PGDHPRWVAMHPTGNY-LYALM-EAG----------NRICEYVIDP-ATHMPVYTHHSFPLIPPGIPDRDPETGK 252 (365)
T ss_dssp -----TTCCEEEEEECTTSSE-EEEEE-TTT----------TEEEEEEECT-TTCCEEEEEEEEESSCTTCCCBCTTTSS
T ss_pred -----CCCCCCEeEECCCCCE-EEEEE-CCC----------CeEEEEEEeC-CCCcEEEccceEEcCCCCcCCccccccc
Confidence 0023567899999997 66542 211 1233433311 345532 122111 1
Q ss_pred --ccccce-ecCCCceEEEEeecccc----ceEEEEEcCCCCCCCceee---ecCcccccccCCCCCceEecc---CCCE
Q 005240 300 --RFRSVS-WCDDSLALVNETWYKTS----QTRTWLVCPGSKDVAPRVL---FDRVFENVYSDPGSPMMTRTS---TGTN 366 (706)
Q Consensus 300 --~~~~~~-wspDg~~l~~~~~~~~~----~~~l~~~d~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~s~---dg~~ 366 (706)
....+. |||||+.|+......+. ...+|.++. + ++...+ ..... . +...++++| ||++
T Consensus 253 ~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~-~--g~~~~~~~~~~~~~----~--~~~~~a~sp~~~dg~~ 323 (365)
T 1jof_A 253 GLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD-C--GSIEKQLFLSPTPT----S--GGHSNAVSPCPWSDEW 323 (365)
T ss_dssp BSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-T--SCEEEEEEEEECSS----C--CTTCCCEEECTTCTTE
T ss_pred ccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-C--CCEEEeeeeeecCC----C--CcccceecCCCcCCCE
Confidence 356788 99999988755322211 344555543 3 233322 11110 0 112356789 8999
Q ss_pred EEEee
Q 005240 367 VIAKI 371 (706)
Q Consensus 367 l~~~~ 371 (706)
|++..
T Consensus 324 l~v~~ 328 (365)
T 1jof_A 324 MAITD 328 (365)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 87764
No 158
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.47 E-value=3.3e-11 Score=124.42 Aligned_cols=289 Identities=10% Similarity=0.016 Sum_probs=158.1
Q ss_pred cccceeeCCCC-CeEEEEeeccccccccCCceeEEEEEcCCCc-----eee-cccCCCccccccccceEEecCCcEEEEE
Q 005240 32 KINFVSWSPDG-KRIAFSVRVDEEDNVSSCKLRVWIADAETGE-----AKP-LFESPDICLNAVFGSFVWVNNSTLLIFT 104 (706)
Q Consensus 32 ~~~~~~~SPDG-~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~-----~~~-lt~~~~~~~~~~~~~~~wSpDg~~l~~~ 104 (706)
.+..++||||+ +.||-.+. ++ .|.++|+..++ ..+ +..+.. .+..+.|+|||++|+..
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~--------D~--~i~vWd~~~~~~~~~~~~~~l~~h~~-----~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASR--------DK--TIIMWKLTRDETNYGIPQRALRGHSH-----FVSDVVISSDGQFALSG 104 (340)
T ss_dssp CEEEEEECTTCTTEEEEEET--------TS--CEEEEEECCSSSCSEEEEEEECCCSS-----CEEEEEECTTSSEEEEE
T ss_pred CEEEEEEeCCCCCEEEEEcC--------CC--eEEEEECCCCCcccceeeEEEeCCCC-----CEEEEEECCCCCEEEEE
Confidence 58899999985 56655432 44 45555554432 111 221122 37789999999998876
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-C-ceecCCC-ceEeeee
Q 005240 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-T-AKDFGTP-AVYTAVE 181 (706)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~-~~~lt~~-~~~~~~~ 181 (706)
..+ +.|..++... . ....... .......
T Consensus 105 ~~d-------------------------------------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (340)
T 4aow_A 105 SWD-------------------------------------------------GTLRLWDLTTGTTTRRFVGHTKDVLSVA 135 (340)
T ss_dssp ETT-------------------------------------------------SEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred ccc-------------------------------------------------ccceEEeecccceeeeecCCCCceeEEE
Confidence 421 4566666633 2 2222222 4566778
Q ss_pred eCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEE
Q 005240 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (706)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~ 261 (706)
++|+++.|+..+.+ ..+.+|++.+............ .....+.|++++...++...
T Consensus 136 ~~~~~~~l~s~s~d-------------~~~~~~d~~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 136 FSSDNRQIVSGSRD-------------KTIKLWNTLGVCKYTVQDESHS-----------EWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp ECTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSSSCS-----------SCEEEEEECSCSSSCEEEEE
T ss_pred EeecCccceeecCC-------------CeEEEEEeCCCceEEEEecccc-----------CcccceEEccCCCCcEEEEE
Confidence 99999998765543 3688999876544333221111 11335688888766343332
Q ss_pred eccCCCCccccCccceeeeecCCCCCCCCce-EEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCcee
Q 005240 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRV 340 (706)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~ 340 (706)
.. ...|.++|+ ..++.. .+......+..+.|+||++.|+..+. ...|.++|+.+. +...
T Consensus 192 ~~-----------d~~i~i~d~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~----Dg~i~iwd~~~~--~~~~ 251 (340)
T 4aow_A 192 GW-----------DKLVKVWNL---ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK----DGQAMLWDLNEG--KHLY 251 (340)
T ss_dssp ET-----------TSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEET----TCEEEEEETTTT--EEEE
T ss_pred cC-----------CCEEEEEEC---CCCceeeEecCCCCcEEEEEECCCCCEEEEEeC----CCeEEEEEeccC--ceee
Confidence 11 124778887 444433 34455677889999999998887652 234666777763 2222
Q ss_pred eecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhh
Q 005240 341 LFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFE 420 (706)
Q Consensus 341 l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 420 (706)
..... . ....+.++|++..++...+ + .+..+|+.++.......... ...
T Consensus 252 ~~~~~-~------~v~~~~~~~~~~~~~~~~d-----~-----------------~i~iwd~~~~~~~~~~~~~~--~~~ 300 (340)
T 4aow_A 252 TLDGG-D------IINALCFSPNRYWLCAATG-----P-----------------SIKIWDLEGKIIVDELKQEV--IST 300 (340)
T ss_dssp EEECS-S------CEEEEEECSSSSEEEEEET-----T-----------------EEEEEETTTTEEEEEECCC------
T ss_pred eecCC-c------eEEeeecCCCCceeeccCC-----C-----------------EEEEEECCCCeEEEeccccc--eee
Confidence 22211 0 1123567888876655431 1 24445555443222211110 000
Q ss_pred hhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCc
Q 005240 421 TAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKK 463 (706)
Q Consensus 421 ~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~ 463 (706)
............+|+|||+.|+....+. .|++|++++|+
T Consensus 301 ~~~~h~~~v~~l~~s~dg~~l~sgs~Dg----~v~iW~~~tGt 339 (340)
T 4aow_A 301 SSKAEPPQCTSLAWSADGQTLFAGYTDN----LVRVWQVTIGT 339 (340)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEETTS----CEEEEEEEC--
T ss_pred eccCCCCCEEEEEECCCCCEEEEEeCCC----EEEEEeCCCcC
Confidence 0111112223578999998777554443 49999988874
No 159
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.47 E-value=7e-11 Score=120.36 Aligned_cols=268 Identities=13% Similarity=0.106 Sum_probs=158.6
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..++|||||++|+.... + ..|.++|+++++..+....... .+....|+||+++|+..+.+
T Consensus 15 ~V~~~~fsp~~~~l~s~~~--------d--g~v~lWd~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~s~s~d---- 76 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLY--------S--GRVELWNYETQVEVRSIQVTET----PVRAGKFIARKNWIIVGSDD---- 76 (304)
T ss_dssp CEEEEEECSSSSEEEEEET--------T--SEEEEEETTTTEEEEEEECCSS----CEEEEEEEGGGTEEEEEETT----
T ss_pred ceEEEEECCCCCEEEEEcC--------C--CcEEEEECCCCceeEEeeccCC----cEEEEEEeCCCCEEEEECCC----
Confidence 4889999999999987642 3 5677778888765443222211 26788999999998876431
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-ceEeeeeeCCCCcE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~SpDG~~ 188 (706)
+.|.++++ +++ ...+... ..+..++|+|++++
T Consensus 77 ---------------------------------------------~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 111 (304)
T 2ynn_A 77 ---------------------------------------------FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY 111 (304)
T ss_dssp ---------------------------------------------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred ---------------------------------------------CEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE
Confidence 56778888 563 3444444 67899999999999
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCC-eeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~ 267 (706)
|+..+.+ ..|.+||+..+ .......... ..+..++|+|++...|+ ....+
T Consensus 112 l~sgs~D-------------~~v~lWd~~~~~~~~~~~~~h~------------~~v~~v~~~p~~~~~l~-sgs~D--- 162 (304)
T 2ynn_A 112 VLSGSDD-------------LTVKLWNWENNWALEQTFEGHE------------HFVMCVAFNPKDPSTFA-SGCLD--- 162 (304)
T ss_dssp EEEEETT-------------SCEEEEEGGGTTEEEEEECCCC------------SCEEEEEECTTCTTEEE-EEETT---
T ss_pred EEEECCC-------------CeEEEEECCCCcchhhhhcccC------------CcEEEEEECCCCCCEEE-EEeCC---
Confidence 8755543 37999999854 3333222111 12447899995443144 22111
Q ss_pred CccccCccceeeeecCCCCCCCCc-eEEee-cccccccceecC--CCceEEEEeeccccceEEEEEcCCCCCCCceeeec
Q 005240 268 ANVEVSPRDIIYTQPAEPAEGEKP-EILHK-LDLRFRSVSWCD--DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 343 (706)
Q Consensus 268 ~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~-~~~~~~~~~wsp--Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~ 343 (706)
..|.+||+ ..+.. ..+.. ....+..+.|+| |+..|+..+. ...|.++|+.++ +....+.
T Consensus 163 --------~~v~iwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~----D~~i~iWd~~~~--~~~~~~~ 225 (304)
T 2ynn_A 163 --------RTVKVWSL---GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTK--SCVATLE 225 (304)
T ss_dssp --------SEEEEEET---TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEET----TSEEEEEETTTT--EEEEEEE
T ss_pred --------CeEEEEEC---CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcC----CCeEEEEeCCCC--ccceeeC
Confidence 24778887 33333 33332 334566677776 6777776552 224666777763 2222222
Q ss_pred CcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhh
Q 005240 344 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 423 (706)
Q Consensus 344 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 423 (706)
..... ...+.|+|++..|+....+ ..+..+|+.+++..+......
T Consensus 226 ~h~~~------v~~~~~~p~~~~l~s~s~D---------------------g~i~iWd~~~~~~~~~~~~~~-------- 270 (304)
T 2ynn_A 226 GHMSN------VSFAVFHPTLPIIISGSED---------------------GTLKIWNSSTYKVEKTLNVGL-------- 270 (304)
T ss_dssp CCSSC------EEEEEECSSSSEEEEEETT---------------------SCEEEEETTTCCEEEEECCSS--------
T ss_pred CCCCC------EEEEEECCCCCEEEEEcCC---------------------CeEEEEECCCCceeeeccCCC--------
Confidence 22111 1236789999987665421 136667877776554443321
Q ss_pred hhccCCCceecccCCCE-EEEEEe
Q 005240 424 ALVFGQGEEDINLNQLK-ILTSKE 446 (706)
Q Consensus 424 ~~~~~~~~~~~s~Dg~~-l~~~~~ 446 (706)
......+|+|+++. ++.+..
T Consensus 271 ---~~~~~~~~~~~~~~~~~asg~ 291 (304)
T 2ynn_A 271 ---ERSWCIATHPTGRKNYIASGF 291 (304)
T ss_dssp ---SSEEEEEECTTCGGGCEEEEE
T ss_pred ---ccEEEEEECCCCCceEEEEec
Confidence 11224577888754 344443
No 160
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.46 E-value=3.6e-12 Score=128.14 Aligned_cols=193 Identities=11% Similarity=0.042 Sum_probs=128.5
Q ss_pred CCceEEEEEEcc-CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeE
Q 005240 479 SLQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFA 557 (706)
Q Consensus 479 ~~~~~~~~~~~~-dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~ 557 (706)
..+.+.+++.+. +|.+++.+ |+|++ + |+||++||++... ....|... ....+.+++.||+
T Consensus 8 ~~~~~~~~~~S~~~~~~~~~~-~~P~~-------~-p~vvllHG~~~~~------~~~~w~~~----~~~~~~~~~~~~~ 68 (280)
T 1r88_A 8 AAPYENLMVPSPSMGRDIPVA-FLAGG-------P-HAVYLLDAFNAGP------DVSNWVTA----GNAMNTLAGKGIS 68 (280)
T ss_dssp CCCCEEEEEEETTTTEEEEEE-EECCS-------S-SEEEEECCSSCCS------SSCHHHHT----SCHHHHHTTSSSE
T ss_pred CCCEEEEEEECcccCCcceEE-EeCCC-------C-CEEEEECCCCCCC------Chhhhhhc----ccHHHHHhcCCeE
Confidence 456788888875 78899998 78864 2 7999999974210 00011100 0134566778999
Q ss_pred EEEcCCCCcCCCCCCCC-c-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 558 VLAGPSIPIIGEGDKLP-N-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 558 v~~~~~~~~~g~g~~~~-~-~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
|++++..++.++..... . ..+.....+|+.. ++.++..+|+++++|+|+||||++|+.++.++|++|+++++.+|
T Consensus 69 vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg 145 (280)
T 1r88_A 69 VVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPD---WLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSG 145 (280)
T ss_dssp EEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHH---HHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred EEEECCCCCCccCCCCCCCCCcHHHHHHHHHHH---HHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECC
Confidence 99988755444321101 1 1233333444444 44443447889999999999999999999999999999999998
Q ss_pred CCCCCC-----------------------------------------------CC----c----c---c-----------
Q 005240 636 SYNKTL-----------------------------------------------TP----F----G---F----------- 646 (706)
Q Consensus 636 ~~d~~~-----------------------------------------------~~----~----~---~----------- 646 (706)
.++... .| . . .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~ 225 (280)
T 1r88_A 146 FLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAM 225 (280)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHH
T ss_pred ccCcCCccchhhHHHHhhhccccchhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHH
Confidence 764210 01 1 1 0
Q ss_pred -hHHHHHHHHHhCC-CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 647 -QAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 647 -~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
+.++|+++|++.| +++++.+|++++|.+.. +...+...+.||.+-|.
T Consensus 226 ~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~~---w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 226 GNSRMFYNQYRSVGGHNGHFDFPASGDNGWGS---WAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECCSSCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCcceEEEecCCCCcChhH---HHHHHHHHHHHHHHHHh
Confidence 1237999999999 99999999888998642 44556677777777554
No 161
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.46 E-value=2.7e-14 Score=162.60 Aligned_cols=89 Identities=18% Similarity=0.079 Sum_probs=69.1
Q ss_pred hHHHHHHHCCeEEEEcCCCCcCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHc--C------------CCCCCcEEEEEec
Q 005240 546 TSSLIFLARRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRR--G------------VADPSRIAVGGHS 610 (706)
Q Consensus 546 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~D~~~~~~~l~~~--~------------~id~~~i~i~G~S 610 (706)
...+.|+++||+|+..+.||. |.+... ..+.....+|+.++++||.++ + ..+..||+++|+|
T Consensus 272 ~~~~~la~~GYaVv~~D~RG~---G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~S 348 (763)
T 1lns_A 272 SLNDYFLTRGFASIYVAGVGT---RSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKS 348 (763)
T ss_dssp HHHHHHHTTTCEEEEECCTTS---TTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEET
T ss_pred chHHHHHHCCCEEEEECCCcC---CCCCCcCCCCCHHHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEEC
Confidence 346889999999999777754 333221 122335689999999999853 1 1345799999999
Q ss_pred hHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 611 YGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 611 ~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
|||++++.+++++|+.++|+|+.+|+.
T Consensus 349 yGG~ial~~Aa~~p~~lkaiV~~~~~~ 375 (763)
T 1lns_A 349 YLGTMAYGAATTGVEGLELILAEAGIS 375 (763)
T ss_dssp HHHHHHHHHHTTTCTTEEEEEEESCCS
T ss_pred HHHHHHHHHHHhCCcccEEEEEecccc
Confidence 999999999999999999999998875
No 162
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.45 E-value=1e-11 Score=129.21 Aligned_cols=234 Identities=9% Similarity=0.001 Sum_probs=138.8
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecC---CcEEEEEecCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN---STLLIFTIPSS 108 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpD---g~~l~~~~~~~ 108 (706)
.+..++|||||++++.+...+ .+...|.++++++++...+..... ...+..+.|+|+ |++|+....
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~------~~d~~v~iw~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~~-- 88 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFA------RGTGVIQLYEIQHGDLKLLREIEK---AKPIKCGTFGATSLQQRYLATGDF-- 88 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--------CCCEEEEEEEECSSSEEEEEEEEE---SSCEEEEECTTCCTTTCCEEEEET--
T ss_pred ceEEEEEcCCCceEEEecCcc------CCCcEEEEEeCCCCcccceeeecc---cCcEEEEEEcCCCCCCceEEEecC--
Confidence 588999999999887765310 134678888988887655432111 113778999999 687776642
Q ss_pred CCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC--ceecCCC-ceEeee----
Q 005240 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--AKDFGTP-AVYTAV---- 180 (706)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~--~~~lt~~-~~~~~~---- 180 (706)
.+.|.++++ +++ ...+... ..+..+
T Consensus 89 -----------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 89 -----------------------------------------------GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp -----------------------------------------------TSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred -----------------------------------------------CCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 156777788 333 3344433 455555
Q ss_pred --eeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCe--eEEcccCCCCCCCCcccCccCCCCccee----eecC
Q 005240 181 --EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSIS----WRAD 252 (706)
Q Consensus 181 --~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~~~~~p~~~~~~~~g~~~~~----~spd 252 (706)
+|+|||+.|+..+.. ..|.+|++..++ ...+....+.... ....+. |+|+
T Consensus 122 ~~~~s~~~~~l~~~~~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRD-------------GTVKVWDPRQKDDPVANMEPVQGENKR---------DCWTVAFGNAYNQE 179 (357)
T ss_dssp GGGCC-CCCEEEEEETT-------------SCEEEECTTSCSSCSEEECCCTTSCCC---------CEEEEEEECCCC-C
T ss_pred ccccCCCccEEEEEeCC-------------CeEEEEeCCCCCCcceeccccCCCCCC---------ceEEEEEEeccCCC
Confidence 679999998866543 379999998553 3444332221111 122334 8899
Q ss_pred CCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecC---CCceEEEEeeccccceEEEEE
Q 005240 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD---DSLALVNETWYKTSQTRTWLV 329 (706)
Q Consensus 253 g~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wsp---Dg~~l~~~~~~~~~~~~l~~~ 329 (706)
++. |+... . ...|.++|+ .+++..........+..+.|+| ++..|+....+ + .|.++
T Consensus 180 ~~~-l~~~~-~-----------d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--g--~i~i~ 239 (357)
T 3i2n_A 180 ERV-VCAGY-D-----------NGDIKLFDL---RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLE--G--KFHVF 239 (357)
T ss_dssp CCE-EEEEE-T-----------TSEEEEEET---TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEEST--T--EEEEE
T ss_pred CCE-EEEEc-c-----------CCeEEEEEC---ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCC--C--eEEEE
Confidence 986 54331 1 125888988 5666655566678889999999 88888876422 2 45556
Q ss_pred cCCCCCCCceee---ecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 330 CPGSKDVAPRVL---FDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 330 d~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
|+.+++...... ...... ....+.|+|+|+.+++..
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 240 DMRTQHPTKGFASVSEKAHKS------TVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp EEEEEETTTEEEEEEEECCSS------CEEEEEEETTEEEEEEEE
T ss_pred eCcCCCcccceeeeccCCCcC------CEEEEEECCCCCcEEEEE
Confidence 655432111110 001111 123477899998544444
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.44 E-value=1.9e-11 Score=126.69 Aligned_cols=292 Identities=10% Similarity=-0.009 Sum_probs=157.9
Q ss_pred cceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCC
Q 005240 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (706)
Q Consensus 34 ~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~ 113 (706)
..++++++++.++.. .....|+++|+++++..+....+.. ..+..+.|+|||+.+++...
T Consensus 3 ~g~~~~~~~~~~v~~----------~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~~~v~~~------- 62 (349)
T 1jmx_B 3 TGPALKAGHEYMIVT----------NYPNNLHVVDVASDTVYKSCVMPDK---FGPGTAMMAPDNRTAYVLNN------- 62 (349)
T ss_dssp -CCCCCTTCEEEEEE----------ETTTEEEEEETTTTEEEEEEECSSC---CSSCEEEECTTSSEEEEEET-------
T ss_pred ccccccCCCEEEEEe----------CCCCeEEEEECCCCcEEEEEecCCC---CCCceeEECCCCCEEEEEeC-------
Confidence 356788877665443 2347899999998876554332220 01568899999998776632
Q ss_pred CCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCce-ecCCC-------ceEeeeeeCC
Q 005240 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTP-------AVYTAVEPSP 184 (706)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~-~lt~~-------~~~~~~~~Sp 184 (706)
....|+++++ +++.. .+... ..+..++|||
T Consensus 63 -----------------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp 101 (349)
T 1jmx_B 63 -----------------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP 101 (349)
T ss_dssp -----------------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT
T ss_pred -----------------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECC
Confidence 1157888898 45433 33222 1256789999
Q ss_pred CCcEEEEEeeccCcccccccccccceEEEEecCCCeeEE-cccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEec
Q 005240 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (706)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~ 263 (706)
||++|++........ ...+......|++||+.+++... +..... + ..+..++|+|||+ |++..
T Consensus 102 dg~~l~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~-------~~~~~~~~s~dg~--l~~~~-- 165 (349)
T 1jmx_B 102 DGKEVYATVNPTQRL-NDHYVVKPPRLEVFSTADGLEAKPVRTFPM----P-------RQVYLMRAADDGS--LYVAG-- 165 (349)
T ss_dssp TSSEEEEEEEEEEEC-SSCEEECCCEEEEEEGGGGGGBCCSEEEEC----C-------SSCCCEEECTTSC--EEEES--
T ss_pred CCCEEEEEccccccc-ccccccCCCeEEEEECCCccccceeeeccC----C-------CcccceeECCCCc--EEEcc--
Confidence 999998877431000 00000012589999998643221 111111 0 1234678999998 55421
Q ss_pred cCCCCccccCccceeeeecCCCCCCCCceEEeeccc-------------------------ccccceecCCCceEEEEee
Q 005240 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL-------------------------RFRSVSWCDDSLALVNETW 318 (706)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-------------------------~~~~~~wspDg~~l~~~~~ 318 (706)
..|+++|+ .+++......... ....+.+++|+......
T Consensus 166 ------------~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-- 228 (349)
T 1jmx_B 166 ------------PDIYKMDV---KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT-- 228 (349)
T ss_dssp ------------SSEEEECT---TTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC--
T ss_pred ------------CcEEEEeC---CCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc--
Confidence 02778887 5555544322111 00111222222111000
Q ss_pred ccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEecc-CCCEEEEeeeccCCcceEEEEecCCCCCCCCCCce
Q 005240 319 YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTS-TGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFL 397 (706)
Q Consensus 319 ~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l 397 (706)
......++.+++.+++ ...+.-... ......+.++| ||+++++. .. .|
T Consensus 229 -~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~sp~dg~~l~~~-~~----------------------~v 277 (349)
T 1jmx_B 229 -ADLLYGYLSVDLKTGK--THTQEFADL-----TELYFTGLRSPKDPNQIYGV-LN----------------------RL 277 (349)
T ss_dssp -CEEEEEEEEEETTTCC--EEEEEEEEC-----SSCEEEEEECSSCTTEEEEE-ES----------------------EE
T ss_pred -cccceeEEEEeccCCc--EEecccccC-----CCcceeeEecCCCCCEEEEE-cC----------------------eE
Confidence 0122234457777743 332211110 00112466899 99988775 11 47
Q ss_pred eeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeE
Q 005240 398 DLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (706)
Q Consensus 398 ~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~ 466 (706)
+.+|+.+++..+.+.... ....+.|||||++|+.. . .-..|++||+++++...
T Consensus 278 ~~~d~~~~~~~~~~~~~~------------~~~~~~~s~dg~~l~~~-~---~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 278 AKYDLKQRKLIKAANLDH------------TYYCVAFDKKGDKLYLG-G---TFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp EEEETTTTEEEEEEECSS------------CCCEEEECSSSSCEEEE-S---BSSEEEEEETTTTEEEE
T ss_pred EEEECccCeEEEEEcCCC------------CccceEECCCCCEEEEe-c---CCCeEEEEeccccceee
Confidence 788888887655544321 12357899999887763 2 22779999998876443
No 164
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.44 E-value=2.3e-12 Score=124.85 Aligned_cols=176 Identities=14% Similarity=0.073 Sum_probs=119.4
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (706)
++..+..+++.|.. . +.|+||++||.+.. ... ...+...|++ ||.|+.++..+..+.|
T Consensus 14 ~~~~l~~~~~~~~~---~---~~p~vv~lHG~g~~-----------~~~----~~~~~~~l~~-~~~vv~~d~~~~~~~g 71 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK---E---SRECLFLLHGSGVD-----------ETT----LVPLARRIAP-TATLVAARGRIPQEDG 71 (223)
T ss_dssp CSSSSCEEEESTTS---S---CCCEEEEECCTTBC-----------TTT----THHHHHHHCT-TSEEEEECCSEEETTE
T ss_pred cCCCceEEEeCCCC---C---CCCEEEEEecCCCC-----------HHH----HHHHHHhcCC-CceEEEeCCCCCcCCc
Confidence 34566666654532 1 13899999996421 011 1133455554 9999987653321111
Q ss_pred CCCC--------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC-
Q 005240 571 DKLP--------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL- 641 (706)
Q Consensus 571 ~~~~--------~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~- 641 (706)
..+. .........+|+.+.++++.++..+|+++++++|+|+||++++.++.++|++++++++.+|......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~ 151 (223)
T 3b5e_A 72 FRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV 151 (223)
T ss_dssp EESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC
T ss_pred cccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcccc
Confidence 1211 1223455678888888888876557899999999999999999999999999999999998765321
Q ss_pred -------CCcc------------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHh
Q 005240 642 -------TPFG------------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 695 (706)
Q Consensus 642 -------~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l 695 (706)
.|.. -..+ +++.|+..+.++++++|| ++|.+.. +..+.+.+||++.+
T Consensus 152 ~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~-----~~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 152 PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGD-----PDAAIVRQWLAGPI 217 (223)
T ss_dssp CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCH-----HHHHHHHHHHHCC-
T ss_pred ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCH-----HHHHHHHHHHHhhh
Confidence 1110 1334 888899999999999999 9998852 34578889998755
No 165
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.44 E-value=2.9e-12 Score=124.95 Aligned_cols=176 Identities=16% Similarity=0.098 Sum_probs=122.7
Q ss_pred EEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCc
Q 005240 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (706)
Q Consensus 487 ~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (706)
+...+| ++.+++.|.+ +.|+||++||.+.. ...+ ..++..|+++||.|+.++.+|
T Consensus 7 ~~~~~g--~~~~~~~~~~-------~~~~vv~~hG~~~~-----------~~~~----~~~~~~l~~~G~~v~~~d~~g- 61 (238)
T 1ufo_A 7 RLTLAG--LSVLARIPEA-------PKALLLALHGLQGS-----------KEHI----LALLPGYAERGFLLLAFDAPR- 61 (238)
T ss_dssp EEEETT--EEEEEEEESS-------CCEEEEEECCTTCC-----------HHHH----HHTSTTTGGGTEEEEECCCTT-
T ss_pred ccccCC--EEEEEEecCC-------CccEEEEECCCccc-----------chHH----HHHHHHHHhCCCEEEEecCCC-
Confidence 333466 4556777864 25899999997421 0111 122345677899999977654
Q ss_pred CCCCCCCCc---hh----------hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEec
Q 005240 567 IGEGDKLPN---DR----------FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 633 (706)
Q Consensus 567 ~g~g~~~~~---~~----------~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 633 (706)
+|.+... .. ......+|+.++++++.+++. .+++++|+|+||.+++.++.++|+++++++..
T Consensus 62 --~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~ 136 (238)
T 1ufo_A 62 --HGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFI 136 (238)
T ss_dssp --STTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEES
T ss_pred --CccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEe
Confidence 3433221 11 245678899999999987653 79999999999999999999999999998888
Q ss_pred cCCCCCC----------------------------CCCcc---------c---hHHHHHHHHH-hCCC-cEEEEEeCCCC
Q 005240 634 SGSYNKT----------------------------LTPFG---------F---QAERFFDALK-GHGA-LSRLVLLPFEH 671 (706)
Q Consensus 634 ~~~~d~~----------------------------~~~~~---------~---~~~~~~~~l~-~~~~-~~~~~~~~~~~ 671 (706)
++..... ..|.. . ..+++++.+. ..+. +++++++|+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (238)
T 1ufo_A 137 GSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAG 216 (238)
T ss_dssp CCSSCCCCCTTCCCCCHHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCC
T ss_pred cCCccchhhhhhccCCcccchhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCC
Confidence 7643211 11110 0 2237888888 7777 89999999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHhcc
Q 005240 672 HVYAARENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 672 H~~~~~~~~~~~~~~~~~f~~~~l~~ 697 (706)
|.+.. +..+.+.+||+++|..
T Consensus 217 H~~~~-----~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 217 HTLTP-----LMARVGLAFLEHWLEA 237 (238)
T ss_dssp SSCCH-----HHHHHHHHHHHHHHHC
T ss_pred cccHH-----HHHHHHHHHHHHHHhc
Confidence 98753 4678899999998853
No 166
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.44 E-value=1.1e-11 Score=129.67 Aligned_cols=225 Identities=13% Similarity=0.032 Sum_probs=138.8
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCc---eeecccCCCccccccccceEEecCCcEEEEEecCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE---AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~---~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~ 108 (706)
.+..++|||||+.||+.. ....|.++++++++ ...+..+.. .+..+.|+|||++|+..+.+
T Consensus 10 ~i~~~~~s~~~~~l~~~~----------~d~~v~i~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~~~~d- 73 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICP----------NNHEVHIYEKSGNKWVQVHELKEHNG-----QVTGVDWAPDSNRIVTCGTD- 73 (372)
T ss_dssp CCCEEEECTTSSEEEEEC----------SSSEEEEEEEETTEEEEEEEEECCSS-----CEEEEEEETTTTEEEEEETT-
T ss_pred CeEEEEECCCCCEEEEEe----------CCCEEEEEeCCCCcEEeeeeecCCCC-----cccEEEEeCCCCEEEEEcCC-
Confidence 488999999999998863 23577888888875 333332222 27789999999998876421
Q ss_pred CCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCce---ecCCC-ceEeeeeeC
Q 005240 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK---DFGTP-AVYTAVEPS 183 (706)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~---~lt~~-~~~~~~~~S 183 (706)
+.|.++++ +++.. .+... ..+..++|+
T Consensus 74 ------------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 105 (372)
T 1k8k_C 74 ------------------------------------------------RNAYVWTLKGRTWKPTLVILRINRAARCVRWA 105 (372)
T ss_dssp ------------------------------------------------SCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred ------------------------------------------------CeEEEEECCCCeeeeeEEeecCCCceeEEEEC
Confidence 45677777 44322 22223 678899999
Q ss_pred CCCcEEEEEeeccCcccccccccccceEEEEecCCCe----eEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEE
Q 005240 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYW 259 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~ 259 (706)
|||++|+..... ..+.+|+++.+. .+.+.... . ..+..+.|+|+++. |+.
T Consensus 106 ~~~~~l~~~~~d-------------~~v~i~d~~~~~~~~~~~~~~~~~-~-----------~~i~~~~~~~~~~~-l~~ 159 (372)
T 1k8k_C 106 PNEKKFAVGSGS-------------RVISICYFEQENDWWVCKHIKKPI-R-----------STVLSLDWHPNSVL-LAA 159 (372)
T ss_dssp TTSSEEEEEETT-------------SSEEEEEEETTTTEEEEEEECTTC-C-----------SCEEEEEECTTSSE-EEE
T ss_pred CCCCEEEEEeCC-------------CEEEEEEecCCCcceeeeeeeccc-C-----------CCeeEEEEcCCCCE-EEE
Confidence 999999876644 368888887554 22221111 0 12457899999985 543
Q ss_pred EEeccCCCCccccCccceeeeecCCC---------------CCCCCc-eEEeecccccccceecCCCceEEEEeeccccc
Q 005240 260 VEAQDRGDANVEVSPRDIIYTQPAEP---------------AEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQ 323 (706)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~d~~~---------------~~~~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (706)
.. .+ +.|+++|+.. ...++. ..+......+..+.|+||+..|+..+. .
T Consensus 160 ~~-~d-----------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d 223 (372)
T 1k8k_C 160 GS-CD-----------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH----D 223 (372)
T ss_dssp EE-TT-----------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET----T
T ss_pred Ec-CC-----------CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC----C
Confidence 31 11 2366777410 012222 223345667889999999998887652 2
Q ss_pred eEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEe
Q 005240 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAK 370 (706)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 370 (706)
..|.++|+.++ +....+..... ....+.|+|+|++++..
T Consensus 224 ~~i~i~d~~~~--~~~~~~~~~~~------~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 224 STVCLADADKK--MAVATLASETL------PLLAVTFITESSLVAAG 262 (372)
T ss_dssp TEEEEEEGGGT--TEEEEEECSSC------CEEEEEEEETTEEEEEE
T ss_pred CEEEEEECCCC--ceeEEEccCCC------CeEEEEEecCCCEEEEE
Confidence 34777777663 23322222111 12247789999877655
No 167
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.44 E-value=6.3e-12 Score=131.78 Aligned_cols=198 Identities=11% Similarity=0.063 Sum_probs=127.4
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~ 112 (706)
+..++|||||++||.++. +....|.++|+++++......... .+.+++|||||++|+..+.
T Consensus 136 ~~~v~fSpDg~~la~as~--------~~d~~i~iwd~~~~~~~~~~~~~~-----~V~~v~fspdg~~l~s~s~------ 196 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASS--------KVPAIMRIIDPSDLTEKFEIETRG-----EVKDLHFSTDGKVVAYITG------ 196 (365)
T ss_dssp EEEEEECTTSSCEEEEES--------CSSCEEEEEETTTTEEEEEEECSS-----CCCEEEECTTSSEEEEECS------
T ss_pred EEEEEEcCCCCEEEEEEC--------CCCCEEEEeECCCCcEEEEeCCCC-----ceEEEEEccCCceEEeccc------
Confidence 456899999999988653 334678889999887665543333 2789999999999887642
Q ss_pred CCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-cee-cCCC--ceEeeeeeCCCCc
Q 005240 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKD-FGTP--AVYTAVEPSPDQK 187 (706)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~-lt~~--~~~~~~~~SpDG~ 187 (706)
..+.+++. +++ ... .... ..+..++|||||+
T Consensus 197 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 197 --------------------------------------------SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp --------------------------------------------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred --------------------------------------------eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 23344444 552 222 2222 5678999999999
Q ss_pred EEEEEeeccCcccccccccccceEEEEecCCCeeEEcc--cCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccC
Q 005240 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELC--DLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (706)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~--~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~ 265 (706)
.++..+..... ...+++|++.......+. ...... ..+..++|||||+. |+... .+
T Consensus 233 ~l~~~s~d~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~----------~~V~~~~~Spdg~~-lasgs-~D- 290 (365)
T 4h5i_A 233 VLIAASLKKGK---------GIVLTKISIKSGNTSVLRSKQVTNRF----------KGITSMDVDMKGEL-AVLAS-ND- 290 (365)
T ss_dssp EEEEEEESSSC---------CEEEEEEEEETTEEEEEEEEEEESSC----------SCEEEEEECTTSCE-EEEEE-TT-
T ss_pred EEEEEecCCcc---------eeEEeecccccceecceeeeeecCCC----------CCeEeEEECCCCCc-eEEEc-CC-
Confidence 99877655321 235777887654432211 111100 22457899999986 55332 11
Q ss_pred CCCccccCccceeeeecCCCCCCCCce-EE-eecccccccceecCCCceEEEEeeccccceEEEEEc
Q 005240 266 GDANVEVSPRDIIYTQPAEPAEGEKPE-IL-HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (706)
Q Consensus 266 ~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l-~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d 330 (706)
..|.+||+ .++++. .+ ..+...+..++|||||+.|+..+.+ +..+||.++
T Consensus 291 ----------~~V~iwd~---~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D--~tvrvw~ip 342 (365)
T 4h5i_A 291 ----------NSIALVKL---KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA--NTIHIIKLP 342 (365)
T ss_dssp ----------SCEEEEET---TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT--SEEEEEECC
T ss_pred ----------CEEEEEEC---CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC--CeEEEEEcC
Confidence 24888998 555543 33 3457789999999999999987632 455666664
No 168
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.44 E-value=4.2e-13 Score=142.76 Aligned_cols=188 Identities=13% Similarity=0.062 Sum_probs=128.5
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
...+.+.++. +|..++++++.|++ .++.|+||++||.+.. .......+...|+++||.|+
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~-----~~~~P~vv~~hG~~~~--------------~~~~~~~~~~~l~~~G~~V~ 225 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSL--------------QTDMWRLFRDHLAKHDIAML 225 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCS-----SSCEEEEEEECCTTSC--------------GGGGHHHHHHTTGGGTCEEE
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCC-----CCCCCEEEEECCCCcc--------------HHHHHHHHHHHHHhCCCEEE
Confidence 4577888887 78899999999976 2358999999996311 00011123456778999999
Q ss_pred EcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCC
Q 005240 560 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 639 (706)
Q Consensus 560 ~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~ 639 (706)
..+.+| +|.+.... ...........+++++.+...+|+++|+|+|+|+||++++.++..+|++++++|+.+|..+.
T Consensus 226 ~~D~~G---~G~s~~~~-~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~ 301 (415)
T 3mve_A 226 TVDMPS---VGYSSKYP-LTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHD 301 (415)
T ss_dssp EECCTT---SGGGTTSC-CCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSH
T ss_pred EECCCC---CCCCCCCC-CCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCcccc
Confidence 977764 33332110 00001112246778888877789999999999999999999999999999999999987531
Q ss_pred CC----------------------------------------------------CCcc--------chHHHHHHHHHhCC
Q 005240 640 TL----------------------------------------------------TPFG--------FQAERFFDALKGHG 659 (706)
Q Consensus 640 ~~----------------------------------------------------~~~~--------~~~~~~~~~l~~~~ 659 (706)
.. .|.. .-+.+..+.+....
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~ 381 (415)
T 3mve_A 302 IFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFS 381 (415)
T ss_dssp HHHCHHHHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHHTB
T ss_pred ccccHHHHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHhC
Confidence 00 0000 00014455666677
Q ss_pred CcEEEEEeCC-CCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 660 ALSRLVLLPF-EHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 660 ~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
.+.++++||+ ..|. ...+....+.+||+++|.
T Consensus 382 ~~~~l~~i~g~~~h~-----~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 382 TYGKAKKISSKTITQ-----GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp TTCEEEEECCCSHHH-----HHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEecCCCccc-----chHHHHHHHHHHHHHHhc
Confidence 8899999998 3332 456788999999999884
No 169
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.43 E-value=1.5e-10 Score=141.55 Aligned_cols=256 Identities=13% Similarity=0.059 Sum_probs=152.2
Q ss_pred cceeEeecCCCCCCCCeee-eecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 5 TGIGIHRLLPDDSLGPEKE-VHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
..|.|+++.. ++... ++. ....+..++|||||++||.... ...|.++|+.+++..........
T Consensus 637 ~~i~vw~~~~----~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~~~----------d~~v~vwd~~~~~~~~~~~~~~~ 700 (1249)
T 3sfz_A 637 KTLQVFKAET----GEKLLDIKA--HEDEVLCCAFSSDDSYIATCSA----------DKKVKIWDSATGKLVHTYDEHSE 700 (1249)
T ss_dssp SCEEEEETTT----CCEEEEECC--CSSCEEEEEECTTSSEEEEEET----------TSEEEEEETTTCCEEEEEECCSS
T ss_pred CeEEEEECCC----CCEEEEecc--CCCCEEEEEEecCCCEEEEEeC----------CCeEEEEECCCCceEEEEcCCCC
Confidence 3578888866 54332 332 2235889999999999988642 35788889988876554322221
Q ss_pred cccccccceEEecCCc--EEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 84 CLNAVFGSFVWVNNST--LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
.+..+.|+|+++ .|+..+. .+.|.+
T Consensus 701 ----~v~~~~~~~~~~~~~l~sg~~-------------------------------------------------d~~v~v 727 (1249)
T 3sfz_A 701 ----QVNCCHFTNKSNHLLLATGSN-------------------------------------------------DFFLKL 727 (1249)
T ss_dssp ----CEEEEEECSSSSCCEEEEEET-------------------------------------------------TSCEEE
T ss_pred ----cEEEEEEecCCCceEEEEEeC-------------------------------------------------CCeEEE
Confidence 377889999654 4443321 156788
Q ss_pred Ecc-CCCc-eecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeE-EcccCCCCCCCCccc
Q 005240 162 GSL-DGTA-KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCY 237 (706)
Q Consensus 162 ~~l-~g~~-~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~~p~~~ 237 (706)
+++ +++. ..+... ..+..++|+|||+.|+..+.. ..|.+|++.++... .+.............
T Consensus 728 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d-------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 794 (1249)
T 3sfz_A 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD-------------GTLRLWDVRSANERKSINVKRFFLSSEDPP 794 (1249)
T ss_dssp EETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS-------------SEEEEEEGGGTEEEEEEECCCCC-------
T ss_pred EECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC-------------CeEEEEeCCCCcccceecccccccccCCcc
Confidence 888 5543 344444 678899999999998866544 37999999855433 322211100000000
Q ss_pred CccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-EEe-ecccccccceecCCCceEEE
Q 005240 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILH-KLDLRFRSVSWCDDSLALVN 315 (706)
Q Consensus 238 ~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~-~~~~~~~~~~wspDg~~l~~ 315 (706)
.........++|+|||+. ++... .+.++++|. .++... .+. .....+..+.|+|++..++.
T Consensus 795 ~~~~~~v~~~~~s~dg~~-l~~~~-------------~~~v~~~d~---~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 857 (1249)
T 3sfz_A 795 EDVEVIVKCCSWSADGDK-IIVAA-------------KNKVLLFDI---HTSGLLAEIHTGHHSTIQYCDFSPYDHLAVI 857 (1249)
T ss_dssp -CCCCCBCCCCBCTTSSE-EEEEE-------------TTEEEEEET---TTCCEEEEEECSSSSCCCEEEECSSTTEEEE
T ss_pred ccccceEEEEEECCCCCE-EEEEc-------------CCcEEEEEe---cCCCceeEEcCCCCCceEEEEEcCCCCEEEE
Confidence 000112447899999997 55432 124778887 444433 333 44677889999999998887
Q ss_pred EeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 316 ETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 316 ~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
.... + .|.++|+.++ ............ ...+.|+|||++++...
T Consensus 858 ~~~d--g--~v~vwd~~~~--~~~~~~~~h~~~------v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 858 ALSQ--Y--CVELWNIDSR--LKVADCRGHLSW------VHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp ECSS--S--CEEEEETTTT--EEEEEECCCSSC------EEEEEECTTSSEEEEEE
T ss_pred EeCC--C--eEEEEEcCCC--ceeeecCCCccc------eEEEEECCCCCEEEEEe
Confidence 6522 2 3566666663 222222221111 22366788888776654
No 170
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.3e-10 Score=121.18 Aligned_cols=252 Identities=8% Similarity=-0.011 Sum_probs=157.5
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
.|.|+++.. ++...... .....+..+.|+|||++|+.... ...|.++|+.+++..........
T Consensus 55 ~i~vwd~~~----~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~-- 117 (369)
T 3zwl_B 55 SASVWYSLN----GERLGTLD-GHTGTIWSIDVDCFTKYCVTGSA----------DYSIKLWDVSNGQCVATWKSPVP-- 117 (369)
T ss_dssp CEEEEETTT----CCEEEEEC-CCSSCEEEEEECTTSSEEEEEET----------TTEEEEEETTTCCEEEEEECSSC--
T ss_pred EEEEEeCCC----chhhhhhh-hcCCcEEEEEEcCCCCEEEEEeC----------CCeEEEEECCCCcEEEEeecCCC--
Confidence 588888866 55443321 12335889999999999987642 35788889988877665443332
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-
Q 005240 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL- 164 (706)
Q Consensus 86 ~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l- 164 (706)
+..+.|+|+|+.|+........ ..+.|.++++
T Consensus 118 ---v~~~~~~~~~~~l~~~~~~~~~--------------------------------------------~~g~i~~~d~~ 150 (369)
T 3zwl_B 118 ---VKRVEFSPCGNYFLAILDNVMK--------------------------------------------NPGSINIYEIE 150 (369)
T ss_dssp ---EEEEEECTTSSEEEEEECCBTT--------------------------------------------BCCEEEEEEEE
T ss_pred ---eEEEEEccCCCEEEEecCCccC--------------------------------------------CCCEEEEEEec
Confidence 7789999999998876532000 1145555555
Q ss_pred CC-C-----------ceecCCC---ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC-CeeE-EcccC
Q 005240 165 DG-T-----------AKDFGTP---AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KLVR-ELCDL 227 (706)
Q Consensus 165 ~g-~-----------~~~lt~~---~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~-~l~~~ 227 (706)
.+ . ...+... ..+..++|+|||+.|+..... ..|.+|++.. .... .+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~ 217 (369)
T 3zwl_B 151 RDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-------------GKISKYDVSNNYEYVDSIDLH 217 (369)
T ss_dssp ECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-------------SEEEEEETTTTTEEEEEEECC
T ss_pred CCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-------------CEEEEEECCCCcEeEEEEecC
Confidence 22 1 1111111 277899999999999876543 3799999986 4333 33222
Q ss_pred CCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceec
Q 005240 228 PPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC 307 (706)
Q Consensus 228 ~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ws 307 (706)
. ..+..+.|+||++. |+... . .+.|.++|+ .+++..........+..+.|+
T Consensus 218 ~-------------~~v~~~~~~~~~~~-l~~~~-~-----------d~~i~v~d~---~~~~~~~~~~~~~~~~~~~~~ 268 (369)
T 3zwl_B 218 E-------------KSISDMQFSPDLTY-FITSS-R-----------DTNSFLVDV---STLQVLKKYETDCPLNTAVIT 268 (369)
T ss_dssp S-------------SCEEEEEECTTSSE-EEEEE-T-----------TSEEEEEET---TTCCEEEEEECSSCEEEEEEC
T ss_pred C-------------CceeEEEECCCCCE-EEEec-C-----------CceEEEEEC---CCCceeeeecCCCCceeEEec
Confidence 1 12447899999986 54332 1 125888988 566665555567778899999
Q ss_pred CCCceEEEEeeccc----------cceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 308 DDSLALVNETWYKT----------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 308 pDg~~l~~~~~~~~----------~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
|+++.+++...... +...+.++|+.++ +.......... ....+.|+|||++|+...
T Consensus 269 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~------~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 269 PLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE--EEIGRVQGHFG------PLNTVAISPQGTSYASGG 334 (369)
T ss_dssp SSSSEEEEEECCC-------------CEEEEEETTTC--CEEEEEECCSS------CEEEEEECTTSSEEEEEE
T ss_pred CCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC--cchhheecccC------cEEEEEECCCCCEEEEEc
Confidence 99999988753321 1125667777663 22222221111 122477999999887664
No 171
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.43 E-value=1e-11 Score=118.37 Aligned_cols=181 Identities=12% Similarity=0.009 Sum_probs=115.7
Q ss_pred eEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCch--HHHHHHHCCeEEE
Q 005240 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPT--SSLIFLARRFAVL 559 (706)
Q Consensus 482 ~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~G~~v~ 559 (706)
.+...+. .+|..+++++|.|.+ +.|+||++||.+.. ...+ .. ....|+++||.|+
T Consensus 4 ~~~~~~~-~~g~~l~~~~~~~~~-------~~~~vv~~hG~~~~-----------~~~~----~~~~~~~~l~~~G~~v~ 60 (207)
T 3bdi_A 4 LQEEFID-VNGTRVFQRKMVTDS-------NRRSIALFHGYSFT-----------SMDW----DKADLFNNYSKIGYNVY 60 (207)
T ss_dssp CEEEEEE-ETTEEEEEEEECCTT-------CCEEEEEECCTTCC-----------GGGG----GGGTHHHHHHTTTEEEE
T ss_pred ceeEEEe-eCCcEEEEEEEeccC-------CCCeEEEECCCCCC-----------cccc----chHHHHHHHHhCCCeEE
Confidence 3444444 389999999999875 25899999997421 0111 23 5678889999999
Q ss_pred EcCCCCcCCCCCC---CCch-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 560 AGPSIPIIGEGDK---LPND-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 560 ~~~~~~~~g~g~~---~~~~-~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
..+.+ |+|.+ .... .+ ..+.++...+..++++ ++.++++++|+|+||.+++.++.+.|++++++++.+|
T Consensus 61 ~~d~~---g~g~s~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~ 133 (207)
T 3bdi_A 61 APDYP---GFGRSASSEKYGIDR--GDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAP 133 (207)
T ss_dssp EECCT---TSTTSCCCTTTCCTT--CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred EEcCC---cccccCcccCCCCCc--chHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCC
Confidence 97765 34444 2111 11 0123333344444443 2457999999999999999999999999999999998
Q ss_pred CCCCC--------CCCcc--------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 005240 636 SYNKT--------LTPFG--------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 693 (706)
Q Consensus 636 ~~d~~--------~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~ 693 (706)
..... ..|.. .-..+..+.+.+.-.+++++++|+++|.+.. ....++.+.+.+||++
T Consensus 134 ~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 134 AWVESLKGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYI-EKPEEFVRITVDFLRN 206 (207)
T ss_dssp CSCGGGHHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHSTTCEEEEETTCCSCHHH-HSHHHHHHHHHHHHHT
T ss_pred ccccchhHHHhhccCCEEEEEECCCCccchHHHHHHHHhcCCceEEEeCCCCCCccc-cCHHHHHHHHHHHHhh
Confidence 63321 11211 0111333333333346799999999998652 2355677778888764
No 172
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.42 E-value=1.1e-10 Score=125.54 Aligned_cols=158 Identities=8% Similarity=0.126 Sum_probs=86.6
Q ss_pred ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC-CCeeEEcccCCCCCCCCcccCccCCCCcceeeecCC
Q 005240 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (706)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg 253 (706)
..+..++|+|||+.|+.. .+ ..|.+|++. ++....+...... ........+..+.|+|++
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d-------------~~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DD-------------LRINLWHLEITDRSFNIVDIKPA-----NMEELTEVITAAEFHPNS 238 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CS-------------SEEEEEETTEEEEEEEEEECCCS-----SGGGCCCCEEEEEECSSC
T ss_pred cceEEEEEcCCCCEEEEe-CC-------------CeEEEEECCCCCceeeeeecccc-----cccccCcceEEEEECCCC
Confidence 567899999999998754 22 379999998 3333322111000 000001224588999999
Q ss_pred CceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-----eEEeeccc------------ccccceecCCCceEEEE
Q 005240 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-----EILHKLDL------------RFRSVSWCDDSLALVNE 316 (706)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-----~~l~~~~~------------~~~~~~wspDg~~l~~~ 316 (706)
...|+.. ..+ +.|.+||+ ..++. ..+..... .+..+.|+|||+.|+..
T Consensus 239 ~~~l~s~-~~d-----------g~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 239 CNTFVYS-SSK-----------GTIRLCDM---RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp TTEEEEE-ETT-----------SCEEEEET---TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred CcEEEEE-eCC-----------CeEEEEEC---cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe
Confidence 4424433 221 24778888 44443 44443333 78899999999998875
Q ss_pred eeccccceEEEEEcCCCCCCCceeeecCc-ccc----cccCC---CCCceEeccCCCEEEEee
Q 005240 317 TWYKTSQTRTWLVCPGSKDVAPRVLFDRV-FEN----VYSDP---GSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 317 ~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~----~~~~~---~~~~~~~s~dg~~l~~~~ 371 (706)
+. ..|.++|+.........+.... +.. .+... ..+.+.|+|||++|+...
T Consensus 304 ~~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s 361 (447)
T 3dw8_B 304 DY-----LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS 361 (447)
T ss_dssp ES-----SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC
T ss_pred eC-----CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEec
Confidence 42 3466677665211222221111 000 00000 123478999999986554
No 173
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.42 E-value=3.4e-12 Score=132.93 Aligned_cols=149 Identities=11% Similarity=0.093 Sum_probs=94.0
Q ss_pred CCceEEEEEEccC--C--eEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHH-H
Q 005240 479 SLQKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-A 553 (706)
Q Consensus 479 ~~~~~~~~~~~~d--g--~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 553 (706)
.++...+.|.+.| | ..+.++++.|.+. .++.|+|++.||... . ..+.+.......+..+..|+ +
T Consensus 40 ~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~----~~~~PvV~~~HG~~~-~------~~~~ps~~~~~~~~~~~~lal~ 108 (377)
T 4ezi_A 40 DLQLYKINYKTQSPDGNLTIASGLVAMPIHP----VGQVGIISYQHGTRF-E------RNDVPSRNNEKNYIYLAAYGNS 108 (377)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEEEEEESSC----SSCEEEEEEECCCCC-S------TTCSGGGCCGGGHHHHHHHTTT
T ss_pred CcEEEEEEEEEECCCCCEEEEEEEEEECCCC----CCCCcEEEEeCCCcC-C------cccCCCcCcccchHHHHHHHHh
Confidence 3466777787765 4 5688999999863 246899999999752 1 11111110001123456788 9
Q ss_pred CCeEEEEcCCCCcCCCCC---CCCchhhHHHHHHHHHHHHHHHHH-cCCCCCCcEEEEEechHHHHHHHHHHhCC----C
Q 005240 554 RRFAVLAGPSIPIIGEGD---KLPNDRFVEQLVSSAEAAVEEVVR-RGVADPSRIAVGGHSYGAFMTAHLLAHAP----H 625 (706)
Q Consensus 554 ~G~~v~~~~~~~~~g~g~---~~~~~~~~~~~~~D~~~~~~~l~~-~~~id~~~i~i~G~S~GG~~a~~~~~~~p----~ 625 (706)
+||+|+.++++|..+.+. .+.........+.|...++..+.+ .+..++.||+++|+|+||+++++++...| +
T Consensus 109 ~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~ 188 (377)
T 4ezi_A 109 AGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPD 188 (377)
T ss_dssp TCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTT
T ss_pred CCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCC
Confidence 999999988875533221 111111112233444444444433 35456789999999999999999987753 3
Q ss_pred -ceeEEEeccCCCC
Q 005240 626 -LFCCGIARSGSYN 638 (706)
Q Consensus 626 -~~~a~v~~~~~~d 638 (706)
.++++++.++.+|
T Consensus 189 l~l~g~~~~~~p~d 202 (377)
T 4ezi_A 189 LPVSAVAPGSAPYG 202 (377)
T ss_dssp SCCCEEEEESCCCC
T ss_pred CceEEEEecCcccC
Confidence 5889998887765
No 174
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.42 E-value=1.2e-10 Score=123.67 Aligned_cols=265 Identities=10% Similarity=0.103 Sum_probs=162.1
Q ss_pred eeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhc
Q 005240 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (706)
Q Consensus 62 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (706)
..|+++++++++..++..... ...+..+.|+|||++|+.....
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~---~~~v~~v~~s~~~~~l~~~~~d---------------------------------- 155 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDE---STYVASVKWSHDGSFLSVGLGN---------------------------------- 155 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCT---TCCEEEEEECTTSSEEEEEETT----------------------------------
T ss_pred CeEEEeeCCCCcEeEeeecCC---CCCEEEEEECCCCCEEEEECCC----------------------------------
Confidence 578999999988776654321 1137789999999998876421
Q ss_pred cCCchhhhhhhhcccceEEEEcc-CC-CceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC-
Q 005240 142 LKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD- 217 (706)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~~l-~g-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 217 (706)
+.|.++++ ++ ..+.+... ..+..++| +++.|+..+.. ..|.+|++.
T Consensus 156 ---------------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-------------g~i~i~d~~~ 205 (401)
T 4aez_A 156 ---------------GLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRS-------------GAIHHHDVRI 205 (401)
T ss_dssp ---------------SCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETT-------------SEEEEEETTS
T ss_pred ---------------CeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCC-------------CCEEEEeccc
Confidence 56777788 45 34444444 67788888 55666655433 379999998
Q ss_pred CC-eeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-EEe
Q 005240 218 GK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILH 295 (706)
Q Consensus 218 ~~-~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~ 295 (706)
.+ ....+.... ..+..+.|+||++. |+... . .+.|.+||+ ..++.. .+.
T Consensus 206 ~~~~~~~~~~~~-------------~~v~~~~~~~~~~~-l~s~~-~-----------d~~v~iwd~---~~~~~~~~~~ 256 (401)
T 4aez_A 206 ANHQIGTLQGHS-------------SEVCGLAWRSDGLQ-LASGG-N-----------DNVVQIWDA---RSSIPKFTKT 256 (401)
T ss_dssp SSCEEEEEECCS-------------SCEEEEEECTTSSE-EEEEE-T-----------TSCEEEEET---TCSSEEEEEC
T ss_pred CcceeeEEcCCC-------------CCeeEEEEcCCCCE-EEEEe-C-----------CCeEEEccC---CCCCccEEec
Confidence 33 233333222 12457899999986 54332 1 124888888 444443 344
Q ss_pred ecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccC
Q 005240 296 KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 375 (706)
Q Consensus 296 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 375 (706)
.....+..+.|+|++..+++.... .....|.++|+.++ +.....+.. .....+.|+|+|+.++.....
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~g-s~d~~i~i~d~~~~--~~~~~~~~~-------~~v~~~~~s~~~~~l~~~~g~-- 324 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGG-TMDKQIHFWNAATG--ARVNTVDAG-------SQVTSLIWSPHSKEIMSTHGF-- 324 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECC-TTTCEEEEEETTTC--CEEEEEECS-------SCEEEEEECSSSSEEEEEECT--
T ss_pred CCcceEEEEEECCCCCCEEEEecC-CCCCEEEEEECCCC--CEEEEEeCC-------CcEEEEEECCCCCeEEEEeec--
Confidence 567788999999998877765421 12345888888774 333332211 012347799999998876411
Q ss_pred CcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEE
Q 005240 376 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYH 455 (706)
Q Consensus 376 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~ 455 (706)
....+..+++.+++...+....+ .........|+||++.|+....+ ..|.
T Consensus 325 -----------------~dg~i~v~~~~~~~~~~~~~~~~---------h~~~v~~~~~s~dg~~l~s~~~d----g~i~ 374 (401)
T 4aez_A 325 -----------------PDNNLSIWSYSSSGLTKQVDIPA---------HDTRVLYSALSPDGRILSTAASD----ENLK 374 (401)
T ss_dssp -----------------TTCEEEEEEEETTEEEEEEEEEC---------CSSCCCEEEECTTSSEEEEECTT----SEEE
T ss_pred -----------------CCCcEEEEecCCccceeEEEecC---------CCCCEEEEEECCCCCEEEEEeCC----CcEE
Confidence 01135566666665544432211 11223357899999877765433 4699
Q ss_pred EEECCCCce
Q 005240 456 ILSWPLKKS 464 (706)
Q Consensus 456 ~~~~~~~~~ 464 (706)
+|++.+++.
T Consensus 375 iw~~~~~~~ 383 (401)
T 4aez_A 375 FWRVYDGDH 383 (401)
T ss_dssp EEECCC---
T ss_pred EEECCCCcc
Confidence 999887654
No 175
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.42 E-value=2e-11 Score=149.36 Aligned_cols=224 Identities=8% Similarity=-0.038 Sum_probs=135.1
Q ss_pred ceEEEEcc-CCCc-eecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCC
Q 005240 157 AQLVLGSL-DGTA-KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (706)
Q Consensus 157 ~~l~~~~l-~g~~-~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~ 233 (706)
+.|+++++ +++. ..+... ..+..++|||||++|+..+.. ..|.+|++.+++...+....
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-------------g~i~vwd~~~~~~~~~~~~~----- 1044 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED-------------SVIQVWNWQTGDYVFLQAHQ----- 1044 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-------------SBEEEEETTTTEEECCBCCS-----
T ss_pred CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-------------CEEEEEECCCCceEEEecCC-----
Confidence 46777787 4533 334333 678899999999999866543 37999999987665443221
Q ss_pred CcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEeecccccccceecCCCce
Q 005240 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLA 312 (706)
Q Consensus 234 p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~wspDg~~ 312 (706)
..+..+.|+|++. ++... . .+.+.+||+ .+++. ..+......+..+.|+|||+.
T Consensus 1045 --------~~v~~~~~~~~~~--l~~~~-~-----------dg~v~vwd~---~~~~~~~~~~~~~~~v~~~~~s~d~~~ 1099 (1249)
T 3sfz_A 1045 --------ETVKDFRLLQDSR--LLSWS-F-----------DGTVKVWNV---ITGRIERDFTCHQGTVLSCAISSDATK 1099 (1249)
T ss_dssp --------SCEEEEEECSSSE--EEEEE-S-----------SSEEEEEET---TTTCCCEEEECCSSCCCCEEECSSSSS
T ss_pred --------CcEEEEEEcCCCc--EEEEE-C-----------CCcEEEEEC---CCCceeEEEcccCCcEEEEEECCCCCE
Confidence 2244778999875 33221 1 225888888 45544 456667788999999999999
Q ss_pred EEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCC
Q 005240 313 LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEG 392 (706)
Q Consensus 313 l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~ 392 (706)
|+..+.+ + .|.++|+.+++ +......... ....+.|||||++|+..... |
T Consensus 1100 l~s~s~d--~--~v~iwd~~~~~--~~~~l~~h~~------~v~~~~~s~dg~~lat~~~d-------------g----- 1149 (1249)
T 3sfz_A 1100 FSSTSAD--K--TAKIWSFDLLS--PLHELKGHNG------CVRCSAFSLDGILLATGDDN-------------G----- 1149 (1249)
T ss_dssp CEEECCS--S--CCCEECSSSSS--CSBCCCCCSS------CEEEEEECSSSSEEEEEETT-------------S-----
T ss_pred EEEEcCC--C--cEEEEECCCcc--eeeeeccCCC------cEEEEEECCCCCEEEEEeCC-------------C-----
Confidence 8876532 2 35566766632 2222111111 12247799999988876421 1
Q ss_pred CCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCce
Q 005240 393 NIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 464 (706)
Q Consensus 393 ~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~ 464 (706)
.+..+|+.+|+......... ................|||||+.++... ..+.+||+.+++.
T Consensus 1150 ---~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~v~~l~fs~dg~~l~s~~------g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1150 ---EIRIWNVSDGQLLHSCAPIS--VEEGTATHGGWVTDVCFSPDSKTLVSAG------GYLKWWNVATGDS 1210 (1249)
T ss_dssp ---CCCEEESSSSCCCCCCCCCC---------CCSCCCEEEECTTSSCEEEES------SSEEEBCSSSCBC
T ss_pred ---EEEEEECCCCceEEEecccc--ccccccccCceEEEEEECCCCCEEEECC------CeEEEEECCCCce
Confidence 25556776665433221100 0001111122334689999999887542 4699999888764
No 176
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.42 E-value=9.2e-11 Score=126.70 Aligned_cols=230 Identities=8% Similarity=-0.026 Sum_probs=127.5
Q ss_pred ceEEEEccC---CC-ceecCC---CceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEE-----c
Q 005240 157 AQLVLGSLD---GT-AKDFGT---PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-----L 224 (706)
Q Consensus 157 ~~l~~~~l~---g~-~~~lt~---~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----l 224 (706)
+.|.++++. ++ .+.+.. ...+..++|+|||++|+..... ..+++|++....... +
T Consensus 125 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-------------g~v~~~~~~~~~~~~~~~~~~ 191 (450)
T 2vdu_B 125 KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF-------------GDVYSIDINSIPEEKFTQEPI 191 (450)
T ss_dssp TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-------------SEEEEEETTSCCCSSCCCCCS
T ss_pred CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC-------------CcEEEEecCCcccccccceee
Confidence 345555553 33 333431 2567899999999999876543 378999987554321 1
Q ss_pred ccCCCCCCCCcccCccCCCCcceeeecC---CCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-E-Eeeccc
Q 005240 225 CDLPPAEDIPVCYNSVREGMRSISWRAD---KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-I-LHKLDL 299 (706)
Q Consensus 225 ~~~~~~~~~p~~~~~~~~g~~~~~~spd---g~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~-l~~~~~ 299 (706)
.... ..+..+.|+|| ++. |+.. ..+ ..|++||+ .+++.. . +.....
T Consensus 192 ~~h~-------------~~v~~~~~sp~~~~~~~-l~s~-~~d-----------~~i~vwd~---~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 192 LGHV-------------SMLTDVHLIKDSDGHQF-IITS-DRD-----------EHIKISHY---PQCFIVDKWLFGHKH 242 (450)
T ss_dssp EECS-------------SCEEEEEEEECTTSCEE-EEEE-ETT-----------SCEEEEEE---SCTTCEEEECCCCSS
T ss_pred eccc-------------CceEEEEEcCCCCCCcE-EEEE-cCC-----------CcEEEEEC---CCCceeeeeecCCCC
Confidence 1111 22457899999 664 4422 211 24788888 444433 3 335667
Q ss_pred ccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCc--ccccc-----------------cCCCCCceEe
Q 005240 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV--FENVY-----------------SDPGSPMMTR 360 (706)
Q Consensus 300 ~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~--~~~~~-----------------~~~~~~~~~~ 360 (706)
.+..+.|+ |++.|+..+. ...|.++|+.+++ ....+... +.... .......+.|
T Consensus 243 ~v~~~~~s-d~~~l~s~~~----d~~v~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGG----DDKIFAWDWKTGK--NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp CEEEEEEC-STTEEEEEES----SSEEEEEETTTCC--EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred ceEEEEEC-CCCEEEEEeC----CCeEEEEECCCCc--EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 88899999 9998887652 2357778887743 22222110 00000 0001224678
Q ss_pred ccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeec--CCC-ceeeeecccchhhhhhhhhhccCCCceecccC
Q 005240 361 TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDI--NTG-SKERIWESNREKYFETAVALVFGQGEEDINLN 437 (706)
Q Consensus 361 s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~--~~g-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~D 437 (706)
+|+|++|++.... ...|..+++ .++ +.+.+-..... .....+.|+|+
T Consensus 316 ~~~~~~l~~~~~~--------------------d~~i~iw~~~~~~~~~l~~~~~~~~~----------~~v~~~~~~~~ 365 (450)
T 2vdu_B 316 SKNLPFVAFFVEA--------------------TKCIIILEMSEKQKGDLALKQIITFP----------YNVISLSAHND 365 (450)
T ss_dssp CSSSSEEEEEETT--------------------CSEEEEEEECSSSTTCEEEEEEEECS----------SCEEEEEEETT
T ss_pred eCCCCEEEEEECC--------------------CCeEEEEEeccCCCCceeeccEeccC----------CceEEEEecCC
Confidence 9999988877521 112444444 332 22222111100 11234678885
Q ss_pred CCEEEEEEecCCCCc------EEEEEECCCCceeEee
Q 005240 438 QLKILTSKESKTEIT------QYHILSWPLKKSSQIT 468 (706)
Q Consensus 438 g~~l~~~~~~~~~p~------~v~~~~~~~~~~~~lt 468 (706)
.++++..+...|. ++|.++..+++.+ ++
T Consensus 366 --~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~-~~ 399 (450)
T 2vdu_B 366 --EFQVTLDNKESSGVQKNFAKFIEYNLNENSFV-VN 399 (450)
T ss_dssp --EEEEEECCTTCCSSCCCSEEEEEEETTTTEEE-EC
T ss_pred --cEEEEEecccCCCCCCcceEEEEEEcCCCeEE-Ec
Confidence 4555556665564 8888887777654 66
No 177
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.42 E-value=3.9e-13 Score=143.09 Aligned_cols=188 Identities=16% Similarity=0.140 Sum_probs=129.7
Q ss_pred ceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEE
Q 005240 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (706)
Q Consensus 481 ~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 560 (706)
..+.+.++. +|..++++++.|.. ++.|+||++||.+.. ...+ .......++++||.|+.
T Consensus 134 ~~~~~~i~~-~~~~l~~~~~~~~~------~~~p~vv~~HG~~~~-----------~~~~---~~~~~~~~~~~g~~vi~ 192 (405)
T 3fnb_A 134 PLKSIEVPF-EGELLPGYAIISED------KAQDTLIVVGGGDTS-----------REDL---FYMLGYSGWEHDYNVLM 192 (405)
T ss_dssp CCEEEEEEE-TTEEEEEEEECCSS------SCCCEEEEECCSSCC-----------HHHH---HHHTHHHHHHTTCEEEE
T ss_pred CcEEEEEeE-CCeEEEEEEEcCCC------CCCCEEEEECCCCCC-----------HHHH---HHHHHHHHHhCCcEEEE
Confidence 467777776 68899999984321 235899999995311 0000 01122356689999999
Q ss_pred cCCCCcCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCC
Q 005240 561 GPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNK 639 (706)
Q Consensus 561 ~~~~~~~g~g~~~~~-~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~ 639 (706)
.+.+ |+|.+... ..+......|+.++++++..+. .+|+|+|+|+||++++.++.++| +++++|+.+|..+.
T Consensus 193 ~D~~---G~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~ 264 (405)
T 3fnb_A 193 VDLP---GQGKNPNQGLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDV 264 (405)
T ss_dssp ECCT---TSTTGGGGTCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCH
T ss_pred EcCC---CCcCCCCCCCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCH
Confidence 7766 34443211 1111234678889999886654 78999999999999999999998 99999999998652
Q ss_pred CC-----------CCc--------------------------------------------------------c-------
Q 005240 640 TL-----------TPF--------------------------------------------------------G------- 645 (706)
Q Consensus 640 ~~-----------~~~--------------------------------------------------------~------- 645 (706)
.. .|. .
T Consensus 265 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D 344 (405)
T 3fnb_A 265 AEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGE 344 (405)
T ss_dssp HHHHHHHCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTS
T ss_pred HHHHHHhhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCC
Confidence 10 000 0
Q ss_pred -----chHHHHHHHHHhCCCcEEEEEeCCCCccC--CCcccHHHHHHHHHHHHHHHhcc
Q 005240 646 -----FQAERFFDALKGHGALSRLVLLPFEHHVY--AARENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 646 -----~~~~~~~~~l~~~~~~~~~~~~~~~~H~~--~~~~~~~~~~~~~~~f~~~~l~~ 697 (706)
-+..+++++|...+.++++++|+++.|.. ........+.+.+.+||+++|..
T Consensus 345 ~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 345 DSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred cCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 01128899999989999999997776652 23456778899999999999864
No 178
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.42 E-value=2.4e-12 Score=128.11 Aligned_cols=125 Identities=15% Similarity=0.171 Sum_probs=92.5
Q ss_pred EEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCC
Q 005240 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (706)
Q Consensus 486 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 565 (706)
.++-.++..+...+|.|.+ + +.|+||++|||++.. ++...+ ..++..|+++||.|+.+++++
T Consensus 42 ~i~~~~~~~~~~~~~~p~~---~---~~p~vv~~HGgg~~~--------~~~~~~----~~~~~~l~~~G~~v~~~d~~~ 103 (262)
T 2pbl_A 42 NLSYGEGDRHKFDLFLPEG---T---PVGLFVFVHGGYWMA--------FDKSSW----SHLAVGALSKGWAVAMPSYEL 103 (262)
T ss_dssp EEESSSSTTCEEEEECCSS---S---CSEEEEEECCSTTTS--------CCGGGC----GGGGHHHHHTTEEEEEECCCC
T ss_pred ccccCCCCCceEEEEccCC---C---CCCEEEEEcCccccc--------CChHHH----HHHHHHHHhCCCEEEEeCCCC
Confidence 3333355567778888875 1 369999999985321 111111 235677888999999987764
Q ss_pred cCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC------CCceeEEEeccCCCCC
Q 005240 566 IIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA------PHLFCCGIARSGSYNK 639 (706)
Q Consensus 566 ~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~------p~~~~a~v~~~~~~d~ 639 (706)
. +. ........|+.++++++..+.. ++++++|||+||++++.++.+. |++++++|+.+|.++.
T Consensus 104 ~---~~-----~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~ 172 (262)
T 2pbl_A 104 C---PE-----VRISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDL 172 (262)
T ss_dssp T---TT-----SCHHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCC
T ss_pred C---CC-----CChHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCc
Confidence 3 22 1245678999999999988643 7999999999999999999887 8899999999998763
No 179
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.41 E-value=5.3e-11 Score=136.19 Aligned_cols=228 Identities=11% Similarity=0.042 Sum_probs=140.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCc------eeecccCCCccccccccceEEecCCcEEEEEe
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE------AKPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~------~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~ 105 (706)
.+..++|+|++..++.+... + ..|.++++..+. .+.+..+.. .+..+.|||||++|+..+
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~-------D--~~i~~W~~~~~~~~~~~~~~~~~~h~~-----~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASR-------D--KSIILWKLTKDDKAYGVAQRRLTGHSH-----FVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CEEEEECCTTCCSEEEEEET-------T--SEEEEEECCCSTTCSCEEEEEEECCSS-----CEEEEEECTTSSEEEEEE
T ss_pred eeEEEEecCCCCCEEEEEeC-------C--CcEEEEEccCCCcccccccceecCCCC-----cEEEEEECCCCCEEEEEe
Confidence 48889999987655554432 3 455555654421 123433332 277899999999988764
Q ss_pred cCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC-CceecCCC-ceEeeeee
Q 005240 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEP 182 (706)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g-~~~~lt~~-~~~~~~~~ 182 (706)
.+ +.|.++|+ ++ ..+.+..+ ..+..++|
T Consensus 450 ~D-------------------------------------------------g~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 450 WD-------------------------------------------------GELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp TT-------------------------------------------------SEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred CC-------------------------------------------------CcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 21 57888888 55 44455444 67899999
Q ss_pred CCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEe
Q 005240 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (706)
Q Consensus 183 SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~ 262 (706)
||||++|+..+.+ ..|.+|++.+.....+........ ..+..+.|+|++...++....
T Consensus 481 s~~~~~l~s~s~D-------------~~i~iwd~~~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 481 SLDNRQIVSASRD-------------RTIKLWNTLGECKYTISEGGEGHR---------DWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp CTTSSCEEEEETT-------------SCEEEECTTSCEEEEECSSTTSCS---------SCEEEEEECSCSSSCEEEEEE
T ss_pred eCCCCEEEEEeCC-------------CEEEEEECCCCcceeeccCCCCCC---------CcEEEEEEeCCCCcceEEEEe
Confidence 9999999765543 379999987665544432211110 124478999998532332321
Q ss_pred ccCCCCccccCccceeeeecCCCCCCCCce-EEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceee
Q 005240 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (706)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 341 (706)
.+ ..|.+||+ .+++.. .+..+...+..+.|+|||+.|+..+.+ + .|.++|+.++ +....
T Consensus 539 ~d-----------~~v~vwd~---~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~D--g--~i~iwd~~~~--~~~~~ 598 (694)
T 3dm0_A 539 WD-----------KTVKVWNL---SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD--G--VVLLWDLAEG--KKLYS 598 (694)
T ss_dssp TT-----------SCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT--S--BCEEEETTTT--EEEEC
T ss_pred CC-----------CeEEEEEC---CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCC--C--eEEEEECCCC--ceEEE
Confidence 11 24788888 454443 355667788999999999988876522 2 3556676663 22111
Q ss_pred ecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
.... .....+.|+|++.+++...
T Consensus 599 ~~~~-------~~v~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 599 LEAN-------SVIHALCFSPNRYWLCAAT 621 (694)
T ss_dssp CBCS-------SCEEEEEECSSSSEEEEEE
T ss_pred ecCC-------CcEEEEEEcCCCcEEEEEc
Confidence 1111 0122467899998877654
No 180
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.41 E-value=9.8e-13 Score=131.88 Aligned_cols=158 Identities=13% Similarity=0.045 Sum_probs=111.5
Q ss_pred CceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHH----HHCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHH
Q 005240 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF----LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAE 587 (706)
Q Consensus 512 ~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~ 587 (706)
+.|+||++|||++..+. ..... ....+..| ++.||.|+.+++++.... .....++|+.
T Consensus 40 ~~p~vv~lHGgg~~~g~------~~~~~----~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~--------~~~~~~~d~~ 101 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPE------NTPND----FNQLANTIKSMDTESTVCQYSIEYRLSPEI--------TNPRNLYDAV 101 (273)
T ss_dssp CCEEEEEECCSTTTCTT------CCGGG----GHHHHHHHHHHCTTCCEEEEEECCCCTTTS--------CTTHHHHHHH
T ss_pred CCeEEEEECCCcccCCc------CChHH----HHHHHHHHhhhhccCCcEEEEeecccCCCC--------CCCcHHHHHH
Confidence 47999999998643100 00011 12345556 479999999888643211 1124577888
Q ss_pred HHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC-----------------CCceeEEEeccCCCCCC----------
Q 005240 588 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-----------------PHLFCCGIARSGSYNKT---------- 640 (706)
Q Consensus 588 ~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~-----------------p~~~~a~v~~~~~~d~~---------- 640 (706)
++++++.++ ++.++|+++|+|+||++++.++.+. |++++++++.+|.++..
T Consensus 102 ~~~~~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~ 179 (273)
T 1vkh_A 102 SNITRLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYD 179 (273)
T ss_dssp HHHHHHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGH
T ss_pred HHHHHHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHH
Confidence 999999887 5778999999999999999999885 78999999998876421
Q ss_pred --------CC------------------------Ccc------------chHHHHHHHHHhCCCcEEEEEeCCCCccCCC
Q 005240 641 --------LT------------------------PFG------------FQAERFFDALKGHGALSRLVLLPFEHHVYAA 676 (706)
Q Consensus 641 --------~~------------------------~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 676 (706)
.. |.. -+..+++++|...+.+++++++|+++|.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~ 259 (273)
T 1vkh_A 180 CFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGLHNDVY 259 (273)
T ss_dssp HHHHHHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCSGGGGG
T ss_pred HHHHHHhcccccchhhcccccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCcccccc
Confidence 00 000 0122889999999999999999999999754
Q ss_pred cccHHHHHHHHHHHH
Q 005240 677 RENVMHVIWETDRWL 691 (706)
Q Consensus 677 ~~~~~~~~~~~~~f~ 691 (706)
.. .++.+.+.+||
T Consensus 260 ~~--~~~~~~i~~fl 272 (273)
T 1vkh_A 260 KN--GKVAKYIFDNI 272 (273)
T ss_dssp GC--HHHHHHHHHTC
T ss_pred cC--hHHHHHHHHHc
Confidence 33 56667777665
No 181
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.41 E-value=5.1e-12 Score=125.72 Aligned_cols=130 Identities=13% Similarity=0.135 Sum_probs=92.7
Q ss_pred ceEEEEE-EccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 481 QKEMIKY-QRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 481 ~~~~~~~-~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
+.+.+.+ .+.||..+....+.|.+ + +.|+||++||.+.. ...+ ........+++.||.|+
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~--~----~~~~vv~~HG~~~~-----------~~~~--~~~~~~~~l~~~g~~v~ 70 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ--D----ERPTCIWLGGYRSD-----------MTGT--KALEMDDLAASLGVGAI 70 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS--T----TSCEEEEECCTTCC-----------TTSH--HHHHHHHHHHHHTCEEE
T ss_pred CcceEEEeeccCcceEEEEeccCCC--C----CCCeEEEECCCccc-----------cccc--hHHHHHHHHHhCCCcEE
Confidence 4555665 55689999888776653 1 14899999996421 0011 01124556678999999
Q ss_pred EcCCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHh---CC---CceeEEE
Q 005240 560 AGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH---AP---HLFCCGI 631 (706)
Q Consensus 560 ~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~---~p---~~~~a~v 631 (706)
..+.+ |+|.+... .......++|+.++++++. ..++.++|||+||.+++.++.+ +| ++++++|
T Consensus 71 ~~d~~---G~G~s~~~~~~~~~~~~~~d~~~~~~~l~------~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~i 141 (270)
T 3llc_A 71 RFDYS---GHGASGGAFRDGTISRWLEEALAVLDHFK------PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMV 141 (270)
T ss_dssp EECCT---TSTTCCSCGGGCCHHHHHHHHHHHHHHHC------CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEE
T ss_pred Eeccc---cCCCCCCccccccHHHHHHHHHHHHHHhc------cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeE
Confidence 97765 44544332 2345667888888888773 5799999999999999999999 99 8999999
Q ss_pred eccCCCC
Q 005240 632 ARSGSYN 638 (706)
Q Consensus 632 ~~~~~~d 638 (706)
+.+|..+
T Consensus 142 l~~~~~~ 148 (270)
T 3llc_A 142 LIAPAPD 148 (270)
T ss_dssp EESCCTT
T ss_pred EecCccc
Confidence 9998654
No 182
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.41 E-value=3.7e-11 Score=140.11 Aligned_cols=239 Identities=13% Similarity=0.106 Sum_probs=149.6
Q ss_pred ceeEeecCCCCCCCCe-eeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeeccc-CCCc
Q 005240 6 GIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE-SPDI 83 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~-~~~~ 83 (706)
.|.|+++.. |+. +.++. ....+..+.|||||++||.... ...|.++++.+++...... +..
T Consensus 36 ~v~iwd~~~----~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~----------dg~i~vw~~~~~~~~~~~~~~~~- 98 (814)
T 3mkq_A 36 RVEIWNYET----QVEVRSIQV--TETPVRAGKFIARKNWIIVGSD----------DFRIRVFNYNTGEKVVDFEAHPD- 98 (814)
T ss_dssp EEEEEETTT----TEEEEEEEC--CSSCEEEEEEEGGGTEEEEEET----------TSEEEEEETTTCCEEEEEECCSS-
T ss_pred EEEEEECCC----CceEEEEec--CCCcEEEEEEeCCCCEEEEEeC----------CCeEEEEECCCCcEEEEEecCCC-
Confidence 588888866 543 33332 2235889999999999998752 3578888988877544332 222
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
.+..+.|+|||++|+..+. .+.|.+++
T Consensus 99 ----~v~~~~~s~~~~~l~~~~~-------------------------------------------------dg~i~vw~ 125 (814)
T 3mkq_A 99 ----YIRSIAVHPTKPYVLSGSD-------------------------------------------------DLTVKLWN 125 (814)
T ss_dssp ----CEEEEEECSSSSEEEEEET-------------------------------------------------TSEEEEEE
T ss_pred ----CEEEEEEeCCCCEEEEEcC-------------------------------------------------CCEEEEEE
Confidence 2778999999999887642 14677777
Q ss_pred c-CC-Cc-eecCCC-ceEeeeeeCC-CCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCccc
Q 005240 164 L-DG-TA-KDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCY 237 (706)
Q Consensus 164 l-~g-~~-~~lt~~-~~~~~~~~Sp-DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~ 237 (706)
+ ++ .. ..+... ..+..++|+| ||+.|+..+.. ..|.+|++.++.. ..+.....
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-------------g~v~vwd~~~~~~~~~~~~~~~-------- 184 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-------------RTVKVWSLGQSTPNFTLTTGQE-------- 184 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT-------------SEEEEEETTCSSCSEEEECCCT--------
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC-------------CeEEEEECCCCcceeEEecCCC--------
Confidence 7 33 22 333333 6788999999 78777765543 3799999975433 22222210
Q ss_pred CccCCCCcceeeec--CCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEeecccccccceecCCCceEE
Q 005240 238 NSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALV 314 (706)
Q Consensus 238 ~~~~~g~~~~~~sp--dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~wspDg~~l~ 314 (706)
.+...+.|+| +++. |+.. .. .+.|.+||. .+++. ..+......+..+.|+|||..|+
T Consensus 185 ----~~v~~~~~~~~~~~~~-l~~~-~~-----------dg~i~~~d~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 244 (814)
T 3mkq_A 185 ----RGVNYVDYYPLPDKPY-MITA-SD-----------DLTIKIWDY---QTKSCVATLEGHMSNVSFAVFHPTLPIII 244 (814)
T ss_dssp ----TCCCEEEECCSTTCCE-EEEE-CT-----------TSEEEEEET---TTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred ----CCEEEEEEEECCCCCE-EEEE-eC-----------CCEEEEEEC---CCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 2244778998 7775 4432 11 125788887 44443 33445667788999999999888
Q ss_pred EEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEE
Q 005240 315 NETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNV 367 (706)
Q Consensus 315 ~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l 367 (706)
..+.+ ..|.++|+.++ +.......... ....++|+|+|+.+
T Consensus 245 ~~~~d----g~v~vwd~~~~--~~~~~~~~~~~------~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 245 SGSED----GTLKIWNSSTY--KVEKTLNVGLE------RSWCIATHPTGRKN 285 (814)
T ss_dssp EEETT----SCEEEEETTTC--SEEEEECCSSS------SEEEEEECTTCGGG
T ss_pred EEeCC----CeEEEEECCCC--cEEEEeecCCC------cEEEEEEccCCCce
Confidence 76522 23666677763 22222221111 12246788888743
No 183
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.41 E-value=1.2e-11 Score=124.05 Aligned_cols=121 Identities=12% Similarity=0.174 Sum_probs=84.9
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..+ .+|.|.+ ++.|+|||+|||++.. +++..+ .......+++.||.|+.++++...
T Consensus 12 ~~~~~~--~~y~p~~------~~~p~iv~~HGGg~~~--------g~~~~~---~~~~~~~l~~~g~~Vi~vdYrlaP-- 70 (274)
T 2qru_A 12 ANGATV--TIYPTTT------EPTNYVVYLHGGGMIY--------GTKSDL---PEELKELFTSNGYTVLALDYLLAP-- 70 (274)
T ss_dssp TTSCEE--EEECCSS------SSCEEEEEECCSTTTS--------CCGGGC---CHHHHHHHHTTTEEEEEECCCCTT--
T ss_pred cCCeeE--EEEcCCC------CCCcEEEEEeCccccC--------CChhhc---hHHHHHHHHHCCCEEEEeCCCCCC--
Confidence 356444 5787753 1369999999997642 221111 112345567789999999998431
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHH---hCCCceeEEEeccCCCC
Q 005240 570 GDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA---HAPHLFCCGIARSGSYN 638 (706)
Q Consensus 570 g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~---~~p~~~~a~v~~~~~~d 638 (706)
+ ......++|+.++++|+.++.. +++||+|+|+|+||.+|+.++. ..+.++++++..+|..+
T Consensus 71 -e-----~~~p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~ 135 (274)
T 2qru_A 71 -N-----TKIDHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTD 135 (274)
T ss_dssp -T-----SCHHHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSC
T ss_pred -C-----CCCcHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEccccc
Confidence 1 1345678999999999988642 2789999999999999999987 35677888887665443
No 184
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.40 E-value=1.2e-11 Score=129.78 Aligned_cols=144 Identities=14% Similarity=0.065 Sum_probs=100.4
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
...+...+...||..+.++.+.|........++.|+||++||.+.. ...|.... ....++..|+++||.|+
T Consensus 25 ~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~--------~~~~~~~~-~~~~~a~~l~~~G~~vi 95 (377)
T 1k8q_A 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLAS--------ATNWISNL-PNNSLAFILADAGYDVW 95 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCC--------GGGGSSSC-TTTCHHHHHHHTTCEEE
T ss_pred CCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCc--------hhhhhcCC-CcccHHHHHHHCCCCEE
Confidence 4678888999999999999887654210001235889999997532 11111111 01245668889999999
Q ss_pred EcCCCCcCCCCCCCCc-----------hhhHHHHHH-HHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC--
Q 005240 560 AGPSIPIIGEGDKLPN-----------DRFVEQLVS-SAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-- 625 (706)
Q Consensus 560 ~~~~~~~~g~g~~~~~-----------~~~~~~~~~-D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~-- 625 (706)
..+.+ |+|.+... ......... |+.++++++.++- +.+++.++||||||.+++.++.++|+
T Consensus 96 ~~D~~---G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~ 170 (377)
T 1k8q_A 96 LGNSR---GNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLA 170 (377)
T ss_dssp ECCCT---TSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHH
T ss_pred EecCC---CCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCchhh
Confidence 97766 44444321 123455666 9999999987752 34689999999999999999999998
Q ss_pred -ceeEEEeccCCC
Q 005240 626 -LFCCGIARSGSY 637 (706)
Q Consensus 626 -~~~a~v~~~~~~ 637 (706)
+++++|+.+|..
T Consensus 171 ~~v~~lvl~~~~~ 183 (377)
T 1k8q_A 171 KRIKTFYALAPVA 183 (377)
T ss_dssp TTEEEEEEESCCS
T ss_pred hhhhEEEEeCCch
Confidence 899999988854
No 185
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.40 E-value=1e-10 Score=123.66 Aligned_cols=302 Identities=10% Similarity=-0.028 Sum_probs=167.9
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCc-------eeecccCCCccccccccceEEecC----C--
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------AKPLFESPDICLNAVFGSFVWVNN----S-- 98 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~-------~~~lt~~~~~~~~~~~~~~~wSpD----g-- 98 (706)
.+..+.|+| +.|+... ....|.++++++++ ...+..+.. .+..+.|+|+ |
T Consensus 18 ~i~~~~~~~--~~l~s~~----------~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCS----------GDGYLKVWDNKLLDNENPKDKSYSHFVHKS-----GLHHVDVLQAIERDAFE 80 (397)
T ss_dssp CEEEEEECS--SEEEEEE----------TTSEEEEEESBCCTTCCGGGGEEEEECCTT-----CEEEEEEEEEEETTTEE
T ss_pred CeEEEEecC--CeEEEEc----------CCCEEEEEECCCcccccCCCcceEEecCCC-----cEEEEEEecccccCCcc
Confidence 578899999 6666653 23578888888876 444433322 2778999999 9
Q ss_pred -cEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC------cee
Q 005240 99 -TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT------AKD 170 (706)
Q Consensus 99 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~------~~~ 170 (706)
++|+..+.+ +.|.++++ +++ ...
T Consensus 81 ~~~l~s~~~d-------------------------------------------------g~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 81 LCLVATTSFS-------------------------------------------------GDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp EEEEEEEETT-------------------------------------------------SCEEEEEEEECTTTCCEEEEE
T ss_pred ccEEEEEcCC-------------------------------------------------CCEEEEEccCCccccccccee
Confidence 888776421 45667777 343 455
Q ss_pred cCCC------ceEeeeeeC----CCCcE-EEEEeeccCcccccccccccceEEEEecCC------Ce-eE-----EcccC
Q 005240 171 FGTP------AVYTAVEPS----PDQKY-VLITSMHRPYSYKVPCARFSQKVQVWTTDG------KL-VR-----ELCDL 227 (706)
Q Consensus 171 lt~~------~~~~~~~~S----pDG~~-i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~-~~-----~l~~~ 227 (706)
+... ..+..++|+ |+|+. |+..+.. ..|.+|++.. ++ .+ .+...
T Consensus 112 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 178 (397)
T 1sq9_A 112 LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------------GTTYIWKFHPFADESNSLTLNWSPTLELQGT 178 (397)
T ss_dssp ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEE
T ss_pred ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------------CcEEEEeCCccccccccceeeccCcceeeee
Confidence 5443 568899999 99999 7655443 3788998876 32 22 22110
Q ss_pred -CCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceE-Eee---c---cc
Q 005240 228 -PPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK---L---DL 299 (706)
Q Consensus 228 -~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~-l~~---~---~~ 299 (706)
... ......+..+.|+|++ . |+... ..+.|.++|+ ..++... +.. . ..
T Consensus 179 ~~~~-------~~~~~~i~~~~~~~~~-~-l~~~~------------~dg~i~i~d~---~~~~~~~~~~~~~~h~~~~~ 234 (397)
T 1sq9_A 179 VESP-------MTPSQFATSVDISERG-L-IATGF------------NNGTVQISEL---STLRPLYNFESQHSMINNSN 234 (397)
T ss_dssp ECCS-------SSSCCCCCEEEECTTS-E-EEEEC------------TTSEEEEEET---TTTEEEEEEECCC---CCCC
T ss_pred eccc-------cCCCCCceEEEECCCc-e-EEEEe------------CCCcEEEEEC---CCCceeEEEeccccccccCC
Confidence 000 0001224578999999 5 55331 1235888888 4444433 333 4 67
Q ss_pred ccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcc-------cccccCCCCCceEeccCCCEEEEeee
Q 005240 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF-------ENVYSDPGSPMMTRTSTGTNVIAKIK 372 (706)
Q Consensus 300 ~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~s~dg~~l~~~~~ 372 (706)
.+..+.|+||++.|+....+ +....|.++|+.++ +....+.... ...........+.|+|+|++|+....
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d-~~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 311 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDS-NSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW 311 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEE-TTEEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred ccceEEECCCCCEEEEEecC-CCCceEEEEECCCC--cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC
Confidence 78899999999988876532 12256888888874 2333222200 00001112234778999998876642
Q ss_pred ccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchh--h----h---hhhhh-hccCCCceecccCCC---
Q 005240 373 KENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREK--Y----F---ETAVA-LVFGQGEEDINLNQL--- 439 (706)
Q Consensus 373 ~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~--~----~---~~~~~-~~~~~~~~~~s~Dg~--- 439 (706)
. + .|..+|+.+++....+...... . . ..+.. .......+.|+||++
T Consensus 312 d----g-----------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 312 D----G-----------------KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp T----S-----------------EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred C----C-----------------eEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 1 1 3556677776654444310000 0 0 00000 012233578999983
Q ss_pred ------EEEEEEecCCCCcEEEEEECCCCc
Q 005240 440 ------KILTSKESKTEITQYHILSWPLKK 463 (706)
Q Consensus 440 ------~l~~~~~~~~~p~~v~~~~~~~~~ 463 (706)
.++++.+.. ..|.+|++++|+
T Consensus 371 ~~~~~~~~l~s~~~d---g~i~iw~~~~g~ 397 (397)
T 1sq9_A 371 MGADLNESLCCVCLD---RSIRWFREAGGK 397 (397)
T ss_dssp TTCTTSCEEEEEETT---TEEEEEEEEC--
T ss_pred ccccccceEEEecCC---CcEEEEEcCCCC
Confidence 344444433 458888887663
No 186
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.39 E-value=5.2e-12 Score=135.48 Aligned_cols=191 Identities=12% Similarity=0.023 Sum_probs=120.8
Q ss_pred CCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCC
Q 005240 30 GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (706)
Q Consensus 30 ~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~ 109 (706)
...+...+|||||++||-... ++ .+.+++.++ ....+. +...--...+..++|||||++||..+.+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~--------dg--~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D-- 150 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSN--------NG--NVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED-- 150 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEET--------TS--CEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT--
T ss_pred CCcEEEEEECCCCCEEEEEeC--------CC--cEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC--
Confidence 446889999999999998764 33 455566444 222232 1110001137789999999999987531
Q ss_pred CCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-Cc--------eecC---C-C-c
Q 005240 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TA--------KDFG---T-P-A 175 (706)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~--------~~lt---~-~-~ 175 (706)
+.|.++++.+ .. ..+. . . .
T Consensus 151 -----------------------------------------------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~ 183 (588)
T 2j04_A 151 -----------------------------------------------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKD 183 (588)
T ss_dssp -----------------------------------------------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCC
T ss_pred -----------------------------------------------CEEEEEECCCCccccccceeeeeeecccccccc
Confidence 5677778743 32 3331 1 1 4
Q ss_pred eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeE----EcccCCCCCCCCcccCccCCCCcceeeec
Q 005240 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR----ELCDLPPAEDIPVCYNSVREGMRSISWRA 251 (706)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~l~~~~~~~~~p~~~~~~~~g~~~~~~sp 251 (706)
.+..++||||| |+..+.+ ..+++|+++++... .+..... ..+..++|+
T Consensus 184 ~V~sVawSPdg--Laass~D-------------~tVrlWd~~~~~~~~~~~tL~~~h~------------~~V~svaFs- 235 (588)
T 2j04_A 184 WVTHIVWYEDV--LVAALSN-------------NSVFSMTVSASSHQPVSRMIQNASR------------RKITDLKIV- 235 (588)
T ss_dssp CEEEEEEETTE--EEEEETT-------------CCEEEECCCSSSSCCCEEEEECCCS------------SCCCCEEEE-
T ss_pred cEEEEEEcCCc--EEEEeCC-------------CeEEEEECCCCccccceeeeccccc------------CcEEEEEEE-
Confidence 78899999999 5444432 47999999976632 2322210 225578899
Q ss_pred CCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEe-eccccccccee--cCCCceEEEEeeccccceEEEE
Q 005240 252 DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KLDLRFRSVSW--CDDSLALVNETWYKTSQTRTWL 328 (706)
Q Consensus 252 dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~~w--spDg~~l~~~~~~~~~~~~l~~ 328 (706)
|+. |+-.. + ..|.+||+ .+++...+. .+...+..+.| +||++.|+.+. +++. +||.
T Consensus 236 -g~~-LASa~--~-----------~tIkLWd~---~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~--edG~-klw~ 294 (588)
T 2j04_A 236 -DYK-VVLTC--P-----------GYVHKIDL---KNYSISSLKTGSLENFHIIPLNHEKESTILLMSN--KTSY-KVLL 294 (588)
T ss_dssp -TTE-EEEEC--S-----------SEEEEEET---TTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS--SCEE-EEEE
T ss_pred -CCE-EEEEe--C-----------CeEEEEEC---CCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc--CCCC-EEEe
Confidence 443 54221 1 24889998 666664444 56778889999 99998877653 2344 7888
Q ss_pred Ec
Q 005240 329 VC 330 (706)
Q Consensus 329 ~d 330 (706)
.|
T Consensus 295 ~d 296 (588)
T 2j04_A 295 ED 296 (588)
T ss_dssp SS
T ss_pred ec
Confidence 87
No 187
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.39 E-value=1.2e-10 Score=123.26 Aligned_cols=309 Identities=11% Similarity=0.067 Sum_probs=167.3
Q ss_pred eeEeecCCCCCCCCeeeeecCCCCCcccceeeCC-CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCC---
Q 005240 7 IGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD--- 82 (706)
Q Consensus 7 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~--- 82 (706)
+.+.+++. ++...+.. .....+..++||| ||+.||.... + ..|.++++++++.........
T Consensus 25 ~~v~~~~~----~~~~~~~~-~h~~~v~~~~~s~~~~~~l~~~~~--------d--g~i~iw~~~~~~~~~~~~~~~~~~ 89 (408)
T 4a11_B 25 RRVLGLEL----NKDRDVER-IHGGGINTLDIEPVEGRYMLSGGS--------D--GVIVLYDLENSSRQSYYTCKAVCS 89 (408)
T ss_dssp HHHHTEEE----CTTEEECC-CCSSCEEEEEECTTTCCEEEEEET--------T--SCEEEEECCCCSSSSCEEECEEEE
T ss_pred ceeecccc----Ccceeeee-ccCCcEEEEEEecCCCCEEEEEcC--------C--CeEEEEECCCCcccceEecccccc
Confidence 34445544 44444432 1233688999999 9999988643 3 467777877765433321000
Q ss_pred ------ccccccccceEEec-CCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcc
Q 005240 83 ------ICLNAVFGSFVWVN-NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYT 155 (706)
Q Consensus 83 ------~~~~~~~~~~~wSp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 155 (706)
......+..+.|+| +++.|+..+.
T Consensus 90 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~------------------------------------------------- 120 (408)
T 4a11_B 90 IGRDHPDVHRYSVETVQWYPHDTGMFTSSSF------------------------------------------------- 120 (408)
T ss_dssp ECTTCTTCCSSCEEEEEECTTCTTCEEEEET-------------------------------------------------
T ss_pred ccccccccCCCcEEEEEEccCCCcEEEEEeC-------------------------------------------------
Confidence 00112377899999 6666665532
Q ss_pred cceEEEEcc-CCCce-ecCCCceEeeeeeCCCC---cEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCC
Q 005240 156 TAQLVLGSL-DGTAK-DFGTPAVYTAVEPSPDQ---KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPP 229 (706)
Q Consensus 156 ~~~l~~~~l-~g~~~-~lt~~~~~~~~~~SpDG---~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~ 229 (706)
.+.|.++++ +++.. .+.....+..+.|+|.+ +.|+..... ..|.+|++..++. ..+....
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~v~~~d~~~~~~~~~~~~~~- 186 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-------------PKVQLCDLKSGSCSHILQGHR- 186 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-------------SSEEEEESSSSCCCEEECCCC-
T ss_pred CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-------------CeEEEEeCCCcceeeeecCCC-
Confidence 157888888 44333 33323566777788754 466655433 3799999985543 3333221
Q ss_pred CCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC--ceEE-------------
Q 005240 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK--PEIL------------- 294 (706)
Q Consensus 230 ~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~--~~~l------------- 294 (706)
..+..+.|+|+++. +++....+ +.|.++|+ ..+. ...+
T Consensus 187 ------------~~v~~~~~~~~~~~-ll~~~~~d-----------g~i~i~d~---~~~~~~~~~~~~~~~~~~~~~~~ 239 (408)
T 4a11_B 187 ------------QEILAVSWSPRYDY-ILATASAD-----------SRVKLWDV---RRASGCLITLDQHNGKKSQAVES 239 (408)
T ss_dssp ------------SCEEEEEECSSCTT-EEEEEETT-----------SCEEEEET---TCSSCCSEECCTTTTCSCCCTTT
T ss_pred ------------CcEEEEEECCCCCc-EEEEEcCC-----------CcEEEEEC---CCCCcccccccccccccceeecc
Confidence 12447899999987 44343222 23666776 2221 1111
Q ss_pred --eecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEe-ccCCCEEEEee
Q 005240 295 --HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR-TSTGTNVIAKI 371 (706)
Q Consensus 295 --~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~ 371 (706)
......+..+.|+||++.|+..+.+ ..|.++|+.+++ ............ ......+.. ...+..+++..
T Consensus 240 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 311 (408)
T 4a11_B 240 ANTAHNGKVNGLCFTSDGLHLLTVGTD----NRMRLWNSSNGE--NTLVNYGKVCNN--SKKGLKFTVSCGCSSEFVFVP 311 (408)
T ss_dssp SSCSCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCC--BCCCCCCCCCCC--CSSCCCCEECCSSSSCEEEEE
T ss_pred ccccccCceeEEEEcCCCCEEEEecCC----CeEEEEECCCCc--cceecccccccc--ccccceeEEecCCCceEEEEe
Confidence 2345667889999999998876522 236677777642 221111111000 001111111 22222333322
Q ss_pred eccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCC
Q 005240 372 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEI 451 (706)
Q Consensus 372 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p 451 (706)
. + ..+..+|+.+++....+.... .......|+||++.|+....+.
T Consensus 312 ~-------------~--------~~i~v~d~~~~~~~~~~~~~~-----------~~v~~~~~s~~~~~l~s~~~dg--- 356 (408)
T 4a11_B 312 Y-------------G--------STIAVYTVYSGEQITMLKGHY-----------KTVDCCVFQSNFQELYSGSRDC--- 356 (408)
T ss_dssp E-------------T--------TEEEEEETTTCCEEEEECCCS-----------SCEEEEEEETTTTEEEEEETTS---
T ss_pred c-------------C--------CEEEEEECcCCcceeeeccCC-----------CeEEEEEEcCCCCEEEEECCCC---
Confidence 1 1 146677877776544443221 1123578999998777654444
Q ss_pred cEEEEEECCCCce
Q 005240 452 TQYHILSWPLKKS 464 (706)
Q Consensus 452 ~~v~~~~~~~~~~ 464 (706)
.|.+|++.+++.
T Consensus 357 -~i~iw~~~~~~~ 368 (408)
T 4a11_B 357 -NILAWVPSLYEP 368 (408)
T ss_dssp -CEEEEEECC---
T ss_pred -eEEEEeCCCCCc
Confidence 499999877653
No 188
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.38 E-value=5.1e-12 Score=127.07 Aligned_cols=202 Identities=13% Similarity=0.148 Sum_probs=126.7
Q ss_pred CceEEEEEEcc-CCeEEEEEEEecCCCCCC---CCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCC
Q 005240 480 LQKEMIKYQRK-DGVPLTATLYLPPGYDQS---KDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR 555 (706)
Q Consensus 480 ~~~~~~~~~~~-dg~~i~~~l~~P~~~~~~---~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 555 (706)
.+...+++.+. -|.++...+|+|++++.. +.+++|||+++||.+-. ...|.... ...+.+.+.|
T Consensus 12 G~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~--------~~~w~~~~----~~~~~~~~~~ 79 (299)
T 4fol_A 12 GRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCT--------PDNASEKA----FWQFQADKYG 79 (299)
T ss_dssp EEEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCC--------HHHHHHHS----CHHHHHHHHT
T ss_pred CEEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCC--------hHHHHHhc----hHhHHHHHcC
Confidence 35666777764 678999999999987532 23469999999995310 01111110 1123345689
Q ss_pred eEEEEcCCCCc-------------CCCCCCCCc----------hhhHHHHHHHHHHHHHHHHH----cCCCCCCcEEEEE
Q 005240 556 FAVLAGPSIPI-------------IGEGDKLPN----------DRFVEQLVSSAEAAVEEVVR----RGVADPSRIAVGG 608 (706)
Q Consensus 556 ~~v~~~~~~~~-------------~g~g~~~~~----------~~~~~~~~~D~~~~~~~l~~----~~~id~~~i~i~G 608 (706)
.++++++..+. .|.+..+.. ..+..-+.+++...|+..-. +...|.++.+|+|
T Consensus 80 ~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G 159 (299)
T 4fol_A 80 FAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITG 159 (299)
T ss_dssp CEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEE
T ss_pred chhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEe
Confidence 98887443211 011111111 12233455666665543221 1224567899999
Q ss_pred echHHHHHHHHHHhC--CCceeEEEeccCCCCCCCCCcc-----------------------------------------
Q 005240 609 HSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKTLTPFG----------------------------------------- 645 (706)
Q Consensus 609 ~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~d~~~~~~~----------------------------------------- 645 (706)
+||||+.|+.++.++ |++|+++.+.+|+.+....++.
T Consensus 160 ~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~p~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~ 239 (299)
T 4fol_A 160 ISMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGD 239 (299)
T ss_dssp BTHHHHHHHHHHHHTGGGTCCSEEEEESCCCCGGGSHHHHHHHHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEET
T ss_pred cCchHHHHHHHHHhCCCCCceEEEEecccccCcccccccccccccccccchhhhhhcCHHHHHHhcccCCCCceEEEecC
Confidence 999999999999985 6789999999998764321110
Q ss_pred ----c----hHHHHHHHHHhCCCc--EEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 646 ----F----QAERFFDALKGHGAL--SRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 646 ----~----~~~~~~~~l~~~~~~--~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
+ ..+.|.+++++++++ +++...||.+|.+.. +....++.++|+.++|.
T Consensus 240 ~D~f~~~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f---~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 240 SDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYF---VSTFVPEHAEFHARNLG 297 (299)
T ss_dssp TCTTHHHHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred CCcchhhhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 0 113688999988876 789999999997542 44567778888888875
No 189
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.38 E-value=3.4e-11 Score=124.96 Aligned_cols=229 Identities=9% Similarity=0.082 Sum_probs=137.2
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..++||||+ +|+..+. + ..|.++|+++++...........-...+..++|||||++|+..+.+
T Consensus 84 ~v~~~~~s~d~-~l~~~s~--------d--g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---- 148 (344)
T 4gqb_B 84 GVADLTWVGER-GILVASD--------S--GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---- 148 (344)
T ss_dssp CEEEEEEETTT-EEEEEET--------T--SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT----
T ss_pred CEEEEEEeCCC-eEEEEEC--------C--CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC----
Confidence 47789999996 4544432 3 4567778777754332110000001137789999999998876421
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-ceEeeeeeCCCCcE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~SpDG~~ 188 (706)
+.|.++|+ +++ ...+... ..+..++|+|+++.
T Consensus 149 ---------------------------------------------~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 183 (344)
T 4gqb_B 149 ---------------------------------------------ICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDS 183 (344)
T ss_dssp ---------------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTT
T ss_pred ---------------------------------------------CeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCC
Confidence 46777888 554 3444444 67889999999987
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~ 267 (706)
++++.... ..|.+||+.+++. ..+...... .....+.|+|++.. ++.....
T Consensus 184 ~l~s~s~D------------~~v~iwd~~~~~~~~~~~~~~~~-----------~~~~~~~~~p~~~~-~l~sg~~---- 235 (344)
T 4gqb_B 184 VFLSCSED------------NRILLWDTRCPKPASQIGCSAPG-----------YLPTSLAWHPQQSE-VFVFGDE---- 235 (344)
T ss_dssp EEEEEETT------------SCEEEEETTSSSCEEECC----C-----------CCEEEEEECSSCTT-EEEEEET----
T ss_pred ceeeeccc------------cccccccccccceeeeeecceee-----------ccceeeeecCCCCc-ceEEecc----
Confidence 76555432 3799999985543 333221110 11336789998776 4323211
Q ss_pred CccccCccceeeeecCCCCCCCC-ceEEeecccccccceecCCCce-EEEEeeccccceEEEEEcCCCCCCCceeeecCc
Q 005240 268 ANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLA-LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV 345 (706)
Q Consensus 268 ~~~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~wspDg~~-l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~ 345 (706)
...|.+||+ .+++ +..+..+...+..+.|+|||.. |+..+ .+ + .|.++|+.++ +...+ ...
T Consensus 236 -------dg~v~~wd~---~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs-~D-~--~i~vwd~~~~--~~~~~-~~H 298 (344)
T 4gqb_B 236 -------NGTVSLVDT---KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS-ED-C--SLAVLDSSLS--ELFRS-QAH 298 (344)
T ss_dssp -------TSEEEEEES---CC--CCEEEECCSSCEEEEEECSSSSCCEEEEE-TT-S--CEEEECTTCC--EEEEE-CCC
T ss_pred -------CCcEEEEEC---CCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe-CC-C--eEEEEECCCC--cEEEE-cCC
Confidence 125888898 4444 4556667788899999999865 55443 22 2 3666687763 32222 211
Q ss_pred ccccccCCCCCceEeccCCCEEEEee
Q 005240 346 FENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 346 ~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
-. ....++|+|+|++++.+.
T Consensus 299 ~~------~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 299 RD------FVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp SS------CEEEEEECSSSTTEEEEE
T ss_pred CC------CEEEEEEeCCCCeEEEEE
Confidence 11 123478999999877664
No 190
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.37 E-value=7.8e-12 Score=122.79 Aligned_cols=159 Identities=17% Similarity=0.107 Sum_probs=115.6
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCch---h-hHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---R-FVEQLVSSAEA 588 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~-~~~~~~~D~~~ 588 (706)
.|+||++||.+.. ... ...++..|+++||.|+..+.+ |+|.+.... . ..+...+|+.+
T Consensus 22 ~~~vv~~HG~~~~-----------~~~----~~~~~~~l~~~G~~v~~~d~~---g~g~s~~~~~~~~~~~~~~~~d~~~ 83 (251)
T 3dkr_A 22 DTGVVLLHAYTGS-----------PND----MNFMARALQRSGYGVYVPLFS---GHGTVEPLDILTKGNPDIWWAESSA 83 (251)
T ss_dssp SEEEEEECCTTCC-----------GGG----GHHHHHHHHHTTCEEEECCCT---TCSSSCTHHHHHHCCHHHHHHHHHH
T ss_pred CceEEEeCCCCCC-----------HHH----HHHHHHHHHHCCCEEEecCCC---CCCCCChhhhcCcccHHHHHHHHHH
Confidence 4788899996421 111 124567788899999997665 555553321 1 34566889999
Q ss_pred HHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC---------------------------
Q 005240 589 AVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--------------------------- 641 (706)
Q Consensus 589 ~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~--------------------------- 641 (706)
+++++.++ .++++++|||+||++++.++.++|+++++++..+|......
T Consensus 84 ~i~~l~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 3dkr_A 84 AVAHMTAK----YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQIL 159 (251)
T ss_dssp HHHHHHTT----CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHh----cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHH
Confidence 99999776 57999999999999999999999999999999998766221
Q ss_pred -------------------------CCcc------------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHH
Q 005240 642 -------------------------TPFG------------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVI 684 (706)
Q Consensus 642 -------------------------~~~~------------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 684 (706)
.|.. -...++++.+... .+++++++|+++|.+.......++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~ 238 (251)
T 3dkr_A 160 AYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHALE 238 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhHHH
Confidence 0100 0111455555443 4789999999999987665688899
Q ss_pred HHHHHHHHHH
Q 005240 685 WETDRWLQKY 694 (706)
Q Consensus 685 ~~~~~f~~~~ 694 (706)
+.+.+||++.
T Consensus 239 ~~i~~fl~~~ 248 (251)
T 3dkr_A 239 EDVIAFMQQE 248 (251)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999999874
No 191
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.37 E-value=1.1e-10 Score=123.87 Aligned_cols=294 Identities=11% Similarity=0.021 Sum_probs=166.1
Q ss_pred cceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCC-ce-eecccCCCccccccccceEEec-CCcEEEEEecCCCC
Q 005240 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-EA-KPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSRR 110 (706)
Q Consensus 34 ~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g-~~-~~lt~~~~~~~~~~~~~~~wSp-Dg~~l~~~~~~~~~ 110 (706)
...+++|+...+++.. .+...|.++++... +. ..+....++ ...+..+.|+| ++++|+..+.+
T Consensus 38 ~~~~~~~~~~~~~~~~---------~~~g~i~v~~~~~~~~~~~~~~~~~~h--~~~V~~~~~~p~~~~~l~s~s~d--- 103 (402)
T 2aq5_A 38 GFCAVNPKFMALICEA---------SGGGAFLVLPLGKTGRVDKNVPLVCGH--TAPVLDIAWCPHNDNVIASGSED--- 103 (402)
T ss_dssp CSEEECSSEEEEEBCC---------SSSCCEEEEETTCCEECCTTCCCBCCC--SSCEEEEEECTTCTTEEEEEETT---
T ss_pred CcEEECCCeEEEEEEE---------cCCCEEEEEECccCCCCCCCCceEecC--CCCEEEEEeCCCCCCEEEEEeCC---
Confidence 3466777665554432 34467888887542 21 111111111 12377899999 88888876421
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC--------ceecCCC-ceEeee
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT--------AKDFGTP-AVYTAV 180 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~--------~~~lt~~-~~~~~~ 180 (706)
+.|.++++ ++. ...+... ..+..+
T Consensus 104 ----------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 137 (402)
T 2aq5_A 104 ----------------------------------------------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIV 137 (402)
T ss_dssp ----------------------------------------------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEE
T ss_pred ----------------------------------------------CeEEEEEccCCCCccccCCceEEecCCCCeEEEE
Confidence 46777777 331 2233333 678899
Q ss_pred eeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEE
Q 005240 181 EPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (706)
Q Consensus 181 ~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~ 260 (706)
+|+|+|+.++++.... ..|.+||+.+++........... ..+..+.|+||++. |+..
T Consensus 138 ~~~p~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~-l~~~ 194 (402)
T 2aq5_A 138 AWHPTAQNVLLSAGCD------------NVILVWDVGTGAAVLTLGPDVHP----------DTIYSVDWSRDGAL-ICTS 194 (402)
T ss_dssp EECSSBTTEEEEEETT------------SCEEEEETTTTEEEEEECTTTCC----------SCEEEEEECTTSSC-EEEE
T ss_pred EECcCCCCEEEEEcCC------------CEEEEEECCCCCccEEEecCCCC----------CceEEEEECCCCCE-EEEE
Confidence 9999996554454432 37999999866544322101100 22457899999987 6543
Q ss_pred EeccCCCCccccCccceeeeecCCCCCCCCce-EE-eeccc-ccccceecCCCceEEEEeeccccceEEEEEcCCCCCCC
Q 005240 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-IL-HKLDL-RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVA 337 (706)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l-~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~ 337 (706)
. . .+.|.+||+ ..++.. .+ ..... .+..+.|+||++.|+.... ......|.++|+.+.+ .
T Consensus 195 ~-~-----------d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-~~~d~~i~iwd~~~~~-~ 257 (402)
T 2aq5_A 195 C-R-----------DKRVRVIEP---RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS-RMSERQVALWDTKHLE-E 257 (402)
T ss_dssp E-T-----------TSEEEEEET---TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEEC-TTCCEEEEEEETTBCS-S
T ss_pred e-c-----------CCcEEEEeC---CCCceeeeeccCCCCCcceEEEEcCCCcEEEEecc-CCCCceEEEEcCcccc-C
Confidence 2 1 125888988 444433 33 22333 3678899999998776521 1234568888887753 2
Q ss_pred ceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCc--eeeeecccc
Q 005240 338 PRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS--KERIWESNR 415 (706)
Q Consensus 338 ~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~--~~~l~~~~~ 415 (706)
+..+..... ......+.|+|||++|++.... ...|..+++.+++ ...+.....
T Consensus 258 ~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~g~~--------------------dg~i~i~d~~~~~~~~~~l~~~~~ 312 (402)
T 2aq5_A 258 PLSLQELDT-----SSGVLLPFFDPDTNIVYLCGKG--------------------DSSIRYFEITSEAPFLHYLSMFSS 312 (402)
T ss_dssp CSEEEECCC-----CSSCEEEEEETTTTEEEEEETT--------------------CSCEEEEEECSSTTCEEEEEEECC
T ss_pred CceEEeccC-----CCceeEEEEcCCCCEEEEEEcC--------------------CCeEEEEEecCCCcceEeeccccc
Confidence 222221110 1123357789999998766421 1135556666665 333322111
Q ss_pred hhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEee
Q 005240 416 EKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQIT 468 (706)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt 468 (706)
......+.|+||+..++. .. ..+.+|++.+++.+.+.
T Consensus 313 ----------~~~v~~~~~sp~~~~~~s---~~---~~~~~~~l~~~~~~~i~ 349 (402)
T 2aq5_A 313 ----------KESQRGMGYMPKRGLEVN---KC---EIARFYKLHERKCEPIA 349 (402)
T ss_dssp ----------SSCCSEEEECCGGGSCGG---GT---EEEEEEEEETTEEEEEE
T ss_pred ----------CCcccceEEeccccccee---cc---eeEEEEEcCCCcEEEEE
Confidence 012345789999876542 11 25777887777666554
No 192
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.37 E-value=1.1e-10 Score=131.08 Aligned_cols=285 Identities=10% Similarity=0.075 Sum_probs=168.3
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCC----ceeecccCCCcccccc-ccceEEec--CCcEEEEE
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----EAKPLFESPDICLNAV-FGSFVWVN--NSTLLIFT 104 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g----~~~~lt~~~~~~~~~~-~~~~~wSp--Dg~~l~~~ 104 (706)
.+..++|||||++||+.. ...|.+++++++ +..+...... .. +..+.|+| ||++|+..
T Consensus 20 ~v~~~~~spdg~~l~~~~-----------~~~v~v~~~~~~~~~~~~~~~~~~h~----~~~v~~~~~sp~~~~~~l~s~ 84 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC-----------GKSAFVRCLDDGDSKVPPVVQFTGHG----SSVVTTVKFSPIKGSQYLCSG 84 (615)
T ss_dssp CCCCCEEETTTTEEEEEE-----------TTEEEEEECCSSCCSSCSEEEECTTT----TSCEEEEEECSSTTCCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-----------CCeEEEEECCCCCCccccceEEecCC----CceEEEEEECcCCCCCEEEEe
Confidence 578899999999999964 247888888876 4333322221 23 67889999 99998876
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC--------C-ceecCCC
Q 005240 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG--------T-AKDFGTP 174 (706)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g--------~-~~~lt~~ 174 (706)
..+ +.|.++++ ++ + ...+...
T Consensus 85 ~~d-------------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~~~~~~ 115 (615)
T 1pgu_A 85 DES-------------------------------------------------GKVIVWGWTFDKESNSVEVNVKSEFQVL 115 (615)
T ss_dssp ETT-------------------------------------------------SEEEEEEEEEEGGGTEEEEEEEEEEECC
T ss_pred cCC-------------------------------------------------CEEEEEeCCCCcccccccccccchhhcc
Confidence 421 45666666 33 1 1222222
Q ss_pred -ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCC
Q 005240 175 -AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (706)
Q Consensus 175 -~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg 253 (706)
..+..++|+|||++|+........ ...|++|+ .+.....+.... ..+..+.|+|++
T Consensus 116 ~~~v~~~~~s~~~~~l~~~~~~~~~---------~~~v~~~d-~~~~~~~~~~~~-------------~~v~~~~~~~~~ 172 (615)
T 1pgu_A 116 AGPISDISWDFEGRRLCVVGEGRDN---------FGVFISWD-SGNSLGEVSGHS-------------QRINACHLKQSR 172 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEECCSSC---------SEEEEETT-TCCEEEECCSCS-------------SCEEEEEECSSS
T ss_pred cccEEEEEEeCCCCEEEEeccCCCC---------ccEEEEEE-CCCcceeeecCC-------------ccEEEEEECCCC
Confidence 578899999999999887654321 24688888 344444443221 124478999999
Q ss_pred CceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-EEeeccc---ccccceecCC-CceEEEEeeccccceEEEE
Q 005240 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDL---RFRSVSWCDD-SLALVNETWYKTSQTRTWL 328 (706)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~---~~~~~~wspD-g~~l~~~~~~~~~~~~l~~ 328 (706)
+..|+.. .. ...|.+||. ..++.. .+..... .+..+.|+|| ++.|+.... ...|.+
T Consensus 173 ~~~l~~~-~~-----------d~~v~vwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~v 233 (615)
T 1pgu_A 173 PMRSMTV-GD-----------DGSVVFYQG---PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS----DRKISC 233 (615)
T ss_dssp SCEEEEE-ET-----------TTEEEEEET---TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET----TCCEEE
T ss_pred CcEEEEE-eC-----------CCcEEEEeC---CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC----CCeEEE
Confidence 8524422 11 125778887 444333 3444455 6888999999 998887652 234777
Q ss_pred EcCCCCCCCceeee-c---CcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCC
Q 005240 329 VCPGSKDVAPRVLF-D---RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT 404 (706)
Q Consensus 329 ~d~~~~~~~~~~l~-~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~ 404 (706)
+|+.++ +....+ . .... ....+.|+ ++++|+..... ..+..+|+.+
T Consensus 234 wd~~~~--~~~~~~~~~~~~~~~------~v~~~~~~-~~~~l~~~~~d---------------------~~i~~wd~~~ 283 (615)
T 1pgu_A 234 FDGKSG--EFLKYIEDDQEPVQG------GIFALSWL-DSQKFATVGAD---------------------ATIRVWDVTT 283 (615)
T ss_dssp EETTTC--CEEEECCBTTBCCCS------CEEEEEES-SSSEEEEEETT---------------------SEEEEEETTT
T ss_pred EECCCC--CEeEEecccccccCC------ceEEEEEc-CCCEEEEEcCC---------------------CcEEEEECCC
Confidence 787764 233322 1 1111 12246788 88887766421 1355677777
Q ss_pred CceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCce
Q 005240 405 GSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKS 464 (706)
Q Consensus 405 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~ 464 (706)
++....+..... ... .......|+ +++.++....+. .+++||+.+++.
T Consensus 284 ~~~~~~~~~~~~----~~~---~~~~~~~~~-~~~~l~~~~~~g----~i~~~d~~~~~~ 331 (615)
T 1pgu_A 284 SKCVQKWTLDKQ----QLG---NQQVGVVAT-GNGRIISLSLDG----TLNFYELGHDEV 331 (615)
T ss_dssp TEEEEEEECCTT----CGG---GCEEEEEEE-ETTEEEEEETTS----CEEEEETTEEEE
T ss_pred CcEEEEEcCCCC----ccc---CceeEEEeC-CCCeEEEEECCC----CEEEEECCCCcE
Confidence 765444433210 000 001123443 777776654433 488888876543
No 193
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.35 E-value=1.6e-10 Score=119.42 Aligned_cols=229 Identities=7% Similarity=-0.004 Sum_probs=138.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCc----eeecccCCCccccccccceEEecCCc-EEEEEec
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFESPDICLNAVFGSFVWVNNST-LLIFTIP 106 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~----~~~lt~~~~~~~~~~~~~~~wSpDg~-~l~~~~~ 106 (706)
.+..++|||||+.|+.... + ..|.++++.+++ .+.+..... .+..+.|+|||+ .|+....
T Consensus 13 ~v~~~~~s~~~~~l~~~~~--------d--~~v~iw~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~ 77 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSW--------D--GSLTVYKFDIQAKNVDLLQSLRYKH-----PLLCCNFIDNTDLQIYVGTV 77 (342)
T ss_dssp CEEEEEEEGGGTEEEEEET--------T--SEEEEEEEETTTTEEEEEEEEECSS-----CEEEEEEEESSSEEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEcC--------C--CeEEEEEeCCCCccccceeeeecCC-----ceEEEEECCCCCcEEEEEcC
Confidence 5888999999999988642 3 466667776666 444443332 277899999999 8887642
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC-CceecCC--C-ceEeeee
Q 005240 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGT--P-AVYTAVE 181 (706)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g-~~~~lt~--~-~~~~~~~ 181 (706)
.+.|.++++ .+ +...+.. . ..+..++
T Consensus 78 -------------------------------------------------dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~ 108 (342)
T 1yfq_A 78 -------------------------------------------------QGEILKVDLIGSPSFQALTNNEANLGICRIC 108 (342)
T ss_dssp -------------------------------------------------TSCEEEECSSSSSSEEECBSCCCCSCEEEEE
T ss_pred -------------------------------------------------CCeEEEEEeccCCceEeccccCCCCceEEEE
Confidence 157888888 65 6666665 5 6788999
Q ss_pred eCCCCcEEEEEeeccCcccccccccccceEEEEecCC---------CeeEEcccCCCCCCCCcccCccCCCCcceeeecC
Q 005240 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG---------KLVRELCDLPPAEDIPVCYNSVREGMRSISWRAD 252 (706)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spd 252 (706)
|+| ++.|+..+.. ..|.+|++.+ .+....... ...+..+.|+|+
T Consensus 109 ~~~-~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~ 161 (342)
T 1yfq_A 109 KYG-DDKLIAASWD-------------GLIEVIDPRNYGDGVIAVKNLNSNNTKV-------------KNKIFTMDTNSS 161 (342)
T ss_dssp EET-TTEEEEEETT-------------SEEEEECHHHHTTBCEEEEESCSSSSSS-------------CCCEEEEEECSS
T ss_pred eCC-CCEEEEEcCC-------------CeEEEEcccccccccccccCCeeeEEee-------------CCceEEEEecCC
Confidence 999 8888765543 3789999864 221111111 022447889988
Q ss_pred CCceEEEEEeccCCCCccccCccceeeeecCCCCCC-CC--ceEE-eecccccccceecC-CCceEEEEeeccccceEEE
Q 005240 253 KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EK--PEIL-HKLDLRFRSVSWCD-DSLALVNETWYKTSQTRTW 327 (706)
Q Consensus 253 g~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~--~~~l-~~~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~l~ 327 (706)
+ |+... . ...|.++|+ .. +. .... ......+..+.|+| |++.|+..+. ++...||
T Consensus 162 ~---l~~~~-~-----------d~~i~i~d~---~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~--dg~i~i~ 221 (342)
T 1yfq_A 162 R---LIVGM-N-----------NSQVQWFRL---PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI--DGRVAVE 221 (342)
T ss_dssp E---EEEEE-S-----------TTEEEEEES---SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET--TSEEEEE
T ss_pred c---EEEEe-C-----------CCeEEEEEC---CccccccceeeecCCCCceeEEEECCCCCCEEEEEec--CCcEEEE
Confidence 6 33221 1 125888888 43 22 2222 23466788899999 9998887652 2445566
Q ss_pred EEcCCCCC--CCceeeecCccc---ccccCCCCCceEeccCCCEEEEee
Q 005240 328 LVCPGSKD--VAPRVLFDRVFE---NVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 328 ~~d~~~~~--~~~~~l~~~~~~---~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
.++..+.. .+....+..... ..........+.|+|+|++|+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 270 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG 270 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE
T ss_pred EEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec
Confidence 66554100 112222221110 000000122477899999887654
No 194
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.35 E-value=9.5e-11 Score=121.43 Aligned_cols=298 Identities=10% Similarity=-0.014 Sum_probs=155.6
Q ss_pred ccceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 4 FTGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
...|++.|+.. ++..+...++.......++|||||++++++. .....|+++|+++++..........
T Consensus 20 ~~~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~---------~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 20 PNNLHVVDVAS----DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN---------NHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp TTEEEEEETTT----TEEEEEEECSSCCSSCEEEECTTSSEEEEEE---------TTTTEEEEEETTTTEEEEEEESCCS
T ss_pred CCeEEEEECCC----CcEEEEEecCCCCCCceeEECCCCCEEEEEe---------CCCCcEEEEeCCCCcEEEEEEcccc
Confidence 35688888876 6655443333312477899999999887654 3346899999998876543322110
Q ss_pred c--ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 84 C--LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 84 ~--~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
. ....+..+.|||||++|++......... ..|. .....|++
T Consensus 87 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~-----------------------~~~~--------------~~~~~i~~ 129 (349)
T 1jmx_B 87 PGEVGRSMYSFAISPDGKEVYATVNPTQRLN-----------------------DHYV--------------VKPPRLEV 129 (349)
T ss_dssp TTEEEECSSCEEECTTSSEEEEEEEEEEECS-----------------------SCEE--------------ECCCEEEE
T ss_pred cccccccccceEECCCCCEEEEEcccccccc-----------------------cccc--------------cCCCeEEE
Confidence 0 0011567899999999888742100000 0000 01268999
Q ss_pred Ecc-CCCcee----cCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcc
Q 005240 162 GSL-DGTAKD----FGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVC 236 (706)
Q Consensus 162 ~~l-~g~~~~----lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~ 236 (706)
+|+ +++... +.....+..++|+|||+ |++. . .+|++||+.+++.......... ..+..
T Consensus 130 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~-~--------------~~i~~~d~~~~~~~~~~~~~~~-~~~~~ 192 (349)
T 1jmx_B 130 FSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA-G--------------PDIYKMDVKTGKYTVALPLRNW-NRKGY 192 (349)
T ss_dssp EEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE-S--------------SSEEEECTTTCCEEEEECSTTC-CCTTB
T ss_pred EECCCccccceeeeccCCCcccceeECCCCc-EEEc-c--------------CcEEEEeCCCCceecccccccc-CCccc
Confidence 998 443221 11223456778999999 6552 1 2599999986655433222110 00100
Q ss_pred cCccCCCCcceeeecCCCceEEE----EEeccCCCCcccc-CccceeeeecCCCCCCCCceEEe--ecccccccceecC-
Q 005240 237 YNSVREGMRSISWRADKPSTLYW----VEAQDRGDANVEV-SPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCD- 308 (706)
Q Consensus 237 ~~~~~~g~~~~~~spdg~~~l~~----~~~~~~~~~~~~~-~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~~~~wsp- 308 (706)
... . ....|+..+...++. +.....+...... .....++.++. .+++.+.+. ........+.|+|
T Consensus 193 ~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~sp~ 265 (349)
T 1jmx_B 193 SAP--D--VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL---KTGKTHTQEFADLTELYFTGLRSPK 265 (349)
T ss_dssp CCC--B--CCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET---TTCCEEEEEEEECSSCEEEEEECSS
T ss_pred cCc--c--ceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec---cCCcEEecccccCCCcceeeEecCC
Confidence 000 0 011222222210110 0000000000000 01112334666 556655543 2344567788999
Q ss_pred CCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCC
Q 005240 309 DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGF 388 (706)
Q Consensus 309 Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~ 388 (706)
||+.++.. ...|+++|+.++ +........ .....+.|+|||++|++...
T Consensus 266 dg~~l~~~------~~~v~~~d~~~~--~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~---------------- 314 (349)
T 1jmx_B 266 DPNQIYGV------LNRLAKYDLKQR--KLIKAANLD-------HTYYCVAFDKKGDKLYLGGT---------------- 314 (349)
T ss_dssp CTTEEEEE------ESEEEEEETTTT--EEEEEEECS-------SCCCEEEECSSSSCEEEESB----------------
T ss_pred CCCEEEEE------cCeEEEEECccC--eEEEEEcCC-------CCccceEECCCCCEEEEecC----------------
Confidence 99988775 236999999884 332222211 01224778999998877421
Q ss_pred CCCCCCCceeeeecCCCceeeee
Q 005240 389 TPEGNIPFLDLFDINTGSKERIW 411 (706)
Q Consensus 389 ~~~~~~~~l~~~d~~~g~~~~l~ 411 (706)
...|..+|+++++....+
T Consensus 315 -----~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 315 -----FNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp -----SSEEEEEETTTTEEEEEE
T ss_pred -----CCeEEEEeccccceeeee
Confidence 124667888877654443
No 195
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.35 E-value=1.9e-10 Score=117.93 Aligned_cols=227 Identities=11% Similarity=0.101 Sum_probs=137.9
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeeccc-CCCccccccccceEEecCCcEEEEEecCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFE-SPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~-~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~ 110 (706)
.+....|||||++|+..+. ...|.++|+.+++..+... +.. .+..+.|+|+++.|+..+.+
T Consensus 67 ~v~~~~~s~dg~~l~s~s~----------D~~v~~wd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~s~D--- 128 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASW----------DKTLRLWDVATGETYQRFVGHKS-----DVMSVDIDKKASMIISGSRD--- 128 (319)
T ss_dssp CEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSCEEEEEETT---
T ss_pred cEEEEEECCCCCEEEEEeC----------CCEEEEEECCCCCeeEEEccCCC-----cEEEEEEcCCCCEEEEEeCC---
Confidence 5788999999999987642 3577888998887654332 222 27789999999988876431
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecCCC-ceEeeeeeCCCCc-
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP-AVYTAVEPSPDQK- 187 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt~~-~~~~~~~~SpDG~- 187 (706)
+.|.++++.+ ....+... ..+..+.|+|+++
T Consensus 129 ----------------------------------------------~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 129 ----------------------------------------------KTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp ----------------------------------------------SCEEEEETTSCEEEEECCCSSCEEEEEECCC---
T ss_pred ----------------------------------------------CeEEEEECCCCeEEEEeccCCcEEEEEEccCCCC
Confidence 4566677766 33444433 5678888998543
Q ss_pred -----EEEEEeeccCcccccccccccceEEEEecCCCeeEE-cccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEE
Q 005240 188 -----YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (706)
Q Consensus 188 -----~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~ 261 (706)
.|+..+.+ ..|.+|++...+... +..+. ..+..+.|+|||+. |+-..
T Consensus 163 ~~~~~~l~s~~~d-------------~~i~~wd~~~~~~~~~~~~h~-------------~~v~~~~~sp~g~~-l~s~~ 215 (319)
T 3frx_A 163 DDDSVTIISAGND-------------KMVKAWNLNQFQIEADFIGHN-------------SNINTLTASPDGTL-IASAG 215 (319)
T ss_dssp ---CCEEEEEETT-------------SCEEEEETTTTEEEEEECCCC-------------SCEEEEEECTTSSE-EEEEE
T ss_pred CCCccEEEEEeCC-------------CEEEEEECCcchhheeecCCC-------------CcEEEEEEcCCCCE-EEEEe
Confidence 55443332 479999998665433 22221 12457899999986 54221
Q ss_pred eccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceee
Q 005240 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (706)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 341 (706)
. ...|.+||+ .+++..........+..+.|+||+..|+.... ...++|.++ .. .....
T Consensus 216 -~-----------dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~---~~i~v~~~~--~~--~~~~~ 273 (319)
T 3frx_A 216 -K-----------DGEIMLWNL---AAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA---TGIKVFSLD--PQ--YLVDD 273 (319)
T ss_dssp -T-----------TCEEEEEET---TTTEEEEEEECCSCEEEEEECSSSSEEEEEET---TEEEEEEET--TE--EEEEE
T ss_pred -C-----------CCeEEEEEC---CCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC---CCcEEEEeC--cC--eeeec
Confidence 1 125888988 44443333344567888999999998887542 234555554 31 11111
Q ss_pred ecCcccc--cccCCCCCceEeccCCCEEEEee
Q 005240 342 FDRVFEN--VYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 342 ~~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
....... ....+....++|||||++|+...
T Consensus 274 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 274 LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp ECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred cCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 1111110 01122233578999999988764
No 196
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.34 E-value=5.5e-12 Score=124.60 Aligned_cols=159 Identities=14% Similarity=0.070 Sum_probs=108.5
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCC---------CchhhHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKL---------PNDRFVEQLV 583 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~---------~~~~~~~~~~ 583 (706)
.|+||++||.+.. ...+ ...+..|+ .+|.|+.++. ...|.|.+. .........+
T Consensus 62 ~p~vv~~HG~~~~-----------~~~~----~~~~~~l~-~~~~v~~~~~-d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 124 (251)
T 2r8b_A 62 APLFVLLHGTGGD-----------ENQF----FDFGARLL-PQATILSPVG-DVSEHGAARFFRRTGEGVYDMVDLERAT 124 (251)
T ss_dssp SCEEEEECCTTCC-----------HHHH----HHHHHHHS-TTSEEEEECC-SEEETTEEESSCBCGGGCBCHHHHHHHH
T ss_pred CcEEEEEeCCCCC-----------HhHH----HHHHHhcC-CCceEEEecC-CcCCCCCcccccCCCCCcCCHHHHHHHH
Confidence 6899999996421 0011 12334444 4699988632 122332211 1122344557
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC--------CCcc----------
Q 005240 584 SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--------TPFG---------- 645 (706)
Q Consensus 584 ~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~--------~~~~---------- 645 (706)
.|+.++++++.++. +.++++|+|+|+||++++.++.++|++++++|+.+|..+... .|..
T Consensus 125 ~~~~~~l~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~ 202 (251)
T 2r8b_A 125 GKMADFIKANREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPIC 202 (251)
T ss_dssp HHHHHHHHHHHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCCCCCCCTTCEEEEEEETTCTTS
T ss_pred HHHHHHHHHHHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccccccccccCCcEEEeccCCCccC
Confidence 88888888887764 778999999999999999999999999999999999876431 1211
Q ss_pred --chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 646 --FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 646 --~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
-..++++++|...+.++++ ++++++|.+. .+..+.+.+||+++|.
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 203 PVQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAYGG 249 (251)
T ss_dssp CHHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGGC-
T ss_pred CHHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHhcC
Confidence 1234888889887888877 5666799874 3457889999999874
No 197
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.34 E-value=8.5e-10 Score=121.63 Aligned_cols=297 Identities=7% Similarity=0.007 Sum_probs=166.0
Q ss_pred eeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCC
Q 005240 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKT 116 (706)
Q Consensus 37 ~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~ 116 (706)
.+||+|+. |+.+ .....|.++|.++++.......... +..+++||||++||.....
T Consensus 144 ~~~p~~~~--~vs~--------~~d~~V~v~D~~t~~~~~~i~~g~~-----~~~v~~spdg~~l~v~~~d--------- 199 (543)
T 1nir_A 144 DLDLPNLF--SVTL--------RDAGQIALVDGDSKKIVKVIDTGYA-----VHISRMSASGRYLLVIGRD--------- 199 (543)
T ss_dssp CCCGGGEE--EEEE--------GGGTEEEEEETTTCCEEEEEECSTT-----EEEEEECTTSCEEEEEETT---------
T ss_pred ccCCCCEE--EEEE--------cCCCeEEEEECCCceEEEEEecCcc-----cceEEECCCCCEEEEECCC---------
Confidence 58998843 3333 3346788899998886554332221 5678899999998876421
Q ss_pred CCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc---CCC-ceecCCCceEeeeeeCC----CCcE
Q 005240 117 MVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL---DGT-AKDFGTPAVYTAVEPSP----DQKY 188 (706)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l---~g~-~~~lt~~~~~~~~~~Sp----DG~~ 188 (706)
+.|.++|+ +++ ...+..+.....++||| ||++
T Consensus 200 ----------------------------------------~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~ 239 (543)
T 1nir_A 200 ----------------------------------------ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRY 239 (543)
T ss_dssp ----------------------------------------SEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTE
T ss_pred ----------------------------------------CeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCE
Confidence 46778887 232 33444445678999999 9999
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~ 268 (706)
|+...... ..|.+||..+.+........+.......+.. ...+..+.+|||++. +++. ..
T Consensus 240 l~v~~~~~------------~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~-~~~v~~i~~s~~~~~-~~vs-~~----- 299 (543)
T 1nir_A 240 TIAGAYWP------------PQFAIMDGETLEPKQIVSTRGMTVDTQTYHP-EPRVAAIIASHEHPE-FIVN-VK----- 299 (543)
T ss_dssp EEEEEEES------------SEEEEEETTTCCEEEEEECCEECSSSCCEES-CCCEEEEEECSSSSE-EEEE-ET-----
T ss_pred EEEEEccC------------CeEEEEeccccccceeecccCcccCcccccc-CCceEEEEECCCCCE-EEEE-EC-----
Confidence 97765432 4789999886654433222111000000000 012346789999986 4433 21
Q ss_pred ccccCccceeeeecCCCCCCCCceEE--eecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcc
Q 005240 269 NVEVSPRDIIYTQPAEPAEGEKPEIL--HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 346 (706)
Q Consensus 269 ~~~~~~~~~l~~~d~~~~~~~~~~~l--~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 346 (706)
..+.|+++|. ...+...+ .........+.|+|||++|+..... ...|.++|+.++ +.....+...
T Consensus 300 -----~~g~i~vvd~---~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~---~~~v~v~D~~tg--~l~~~i~~g~ 366 (543)
T 1nir_A 300 -----ETGKVLLVNY---KDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN---SNKVAVIDSKDR--RLSALVDVGK 366 (543)
T ss_dssp -----TTTEEEEEEC---TTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG---GTEEEEEETTTT--EEEEEEECSS
T ss_pred -----CCCeEEEEEe---cCCCcceeEEeccCcCccCceECCCCCEEEEEecC---CCeEEEEECCCC--eEEEeeccCC
Confidence 1235888888 33332221 1234556788999999988765422 235778999884 3333322110
Q ss_pred cccccCCCCCceE-eccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCC-------Cceeeeecccchhh
Q 005240 347 ENVYSDPGSPMMT-RTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINT-------GSKERIWESNREKY 418 (706)
Q Consensus 347 ~~~~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~-------g~~~~l~~~~~~~~ 418 (706)
. ..|+.. .. .+|++..++++... + ...|..+|.++ .+..+.+...+
T Consensus 367 ~---ph~g~g-~~~~~p~~g~~~~s~~~-------------~------d~~V~v~d~~~~~~~~~~~~~v~~l~~~g--- 420 (543)
T 1nir_A 367 T---PHPGRG-ANFVHPKYGPVWSTSHL-------------G------DGSISLIGTDPKNHPQYAWKKVAELQGQG--- 420 (543)
T ss_dssp S---BCCTTC-EEEEETTTEEEEEEEBS-------------S------SSEEEEEECCTTTCTTTBTSEEEEEECSC---
T ss_pred C---CCCCCC-cccCCCCCccEEEeccC-------------C------CceEEEEEeCCCCCchhcCeEEEEEEcCC---
Confidence 0 012211 12 36776665554311 0 11355566655 34333332221
Q ss_pred hhhhhhhccCCCceecccCCCEEEEEEecCC----CCcEEEEEECCCCcee
Q 005240 419 FETAVALVFGQGEEDINLNQLKILTSKESKT----EITQYHILSWPLKKSS 465 (706)
Q Consensus 419 ~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~----~p~~v~~~~~~~~~~~ 465 (706)
.+...+.++|||++|+.. +..+ .-..|.++|+++++..
T Consensus 421 --------~~~~~v~~~pdg~~l~v~-~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 421 --------GGSLFIKTHPKSSHLYVD-TTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp --------SCCCCEECCTTCCEEEEC-CTTCSSHHHHTCEEEEETTCTTSC
T ss_pred --------CCceEEEcCCCCCcEEEe-cCCCCCcccCceEEEEECCCCCCC
Confidence 122357899999876643 2211 1237999999887643
No 198
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.34 E-value=2.6e-10 Score=122.54 Aligned_cols=255 Identities=16% Similarity=0.116 Sum_probs=148.8
Q ss_pred ceeEeecCCCCCCCCeeeeecC-CCCCcccceeeCC-CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGY-PDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
.|.|+|+.. ++...+..+ .....+..++||| ||++|+..+. + ..|.++|++++..+.+......
T Consensus 143 ~i~lWd~~~----~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~--------D--~~v~iwd~~~~~~~~~~~~~~~ 208 (435)
T 4e54_B 143 DIMLWNFGI----KDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM--------E--GTTRLQDFKGNILRVFASSDTI 208 (435)
T ss_dssp CEEEECSSC----CSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS--------S--SCEEEEETTSCEEEEEECCSSC
T ss_pred EEEEEECCC----CCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC--------C--CEEEEeeccCCceeEEeccCCC
Confidence 588888876 544433322 2234689999999 6787765432 3 4566778888766555432221
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
...+..+.|+|||++|+.... .+.|.+++
T Consensus 209 --~~~~~~~~~~~~~~~l~~g~~-------------------------------------------------dg~i~~wd 237 (435)
T 4e54_B 209 --NIWFCSLDVSASSRMVVTGDN-------------------------------------------------VGNVILLN 237 (435)
T ss_dssp --SCCCCCEEEETTTTEEEEECS-------------------------------------------------SSBEEEEE
T ss_pred --CccEEEEEECCCCCEEEEEeC-------------------------------------------------CCcEeeec
Confidence 222457899999998887632 15688888
Q ss_pred cCC-CceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCcc
Q 005240 164 LDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSV 240 (706)
Q Consensus 164 l~g-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~ 240 (706)
+++ ....+... ..+..++|+|+++.++++.... ..|.+||+...+. ..+......
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d------------~~v~iwd~~~~~~~~~~~~~~~h---------- 295 (435)
T 4e54_B 238 MDGKELWNLRMHKKKVTHVALNPCCDWFLATASVD------------QTVKIWDLRQVRGKASFLYSLPH---------- 295 (435)
T ss_dssp SSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT------------SBCCEEETTTCCSSSCCSBCCBC----------
T ss_pred cCcceeEEEecccceEEeeeecCCCceEEEEecCc------------ceeeEEecccccccceEEEeeec----------
Confidence 876 44445444 6788999999999877665442 3688999874432 112111111
Q ss_pred CCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC-ceEEeecc------cccccceecCCCceE
Q 005240 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLD------LRFRSVSWCDDSLAL 313 (706)
Q Consensus 241 ~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~------~~~~~~~wspDg~~l 313 (706)
...+..+.|+|||+. |+... .+ +.|.+||+ ..++ +..+.... .......|+|++..+
T Consensus 296 ~~~v~~~~~spdg~~-l~s~~-~D-----------~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (435)
T 4e54_B 296 RHPVNAACFSPDGAR-LLTTD-QK-----------SEIRVYSA---SQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLI 359 (435)
T ss_dssp SSCEEECCBCTTSSE-EEEEE-SS-----------SCEEEEES---SSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCE
T ss_pred cccccceeECCCCCe-eEEEc-CC-----------CEEEEEEC---CCCccceEEecccccccccceeEEEEEcCCCCEE
Confidence 022457899999986 54331 11 24778887 3333 33332221 123356788988877
Q ss_pred EEEeeccc--------cceEEEEEcCCCCCCCceeeecCcccccccCCCCCce-EeccCCCEEEEe
Q 005240 314 VNETWYKT--------SQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMM-TRTSTGTNVIAK 370 (706)
Q Consensus 314 ~~~~~~~~--------~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~ 370 (706)
+....... ....|.++|..+++ ....+...... ....+ .|+|||++|+..
T Consensus 360 ~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~-~~~~l~~~~~~------~v~s~~~fspdg~~lasg 418 (435)
T 4e54_B 360 VVGRYPDPNFKSCTPYELRTIDVFDGNSGK-MMCQLYDPESS------GISSLNEFNPMGDTLASA 418 (435)
T ss_dssp EEECCCCTTSCCSSTTCCCCEEEECSSSCC-EEEEECCSSCC------CCCCEEEECTTSSCEEEE
T ss_pred EEEEcCCCCeEEEEecCCCEEEEEECCCCc-EEEEEeCCCCC------cEEEEEEECCCCCEEEEE
Confidence 76542211 12246777877742 11222222211 12223 589999988654
No 199
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.34 E-value=7e-10 Score=115.00 Aligned_cols=256 Identities=10% Similarity=0.063 Sum_probs=146.2
Q ss_pred ceeEeecCCCCCCC-CeeeeecCCC-CCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceee-cccCCC
Q 005240 6 GIGIHRLLPDDSLG-PEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPD 82 (706)
Q Consensus 6 ~~~~~~~~~~~~~g-~~~~i~~~~~-~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-lt~~~~ 82 (706)
.|.|+++......+ ....+..+.. ...+..++|||||+.|+..+. ...|.++|+.+++..+ +..+..
T Consensus 50 ~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~----------D~~v~lwd~~~~~~~~~~~~h~~ 119 (343)
T 2xzm_R 50 TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW----------DKTLRLWDLRTGTTYKRFVGHQS 119 (343)
T ss_dssp CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET----------TSEEEEEETTSSCEEEEEECCCS
T ss_pred EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC----------CCcEEEEECCCCcEEEEEcCCCC
Confidence 57888886521111 1112222222 225888999999999876542 3577788988876544 332222
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEE
Q 005240 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (706)
Q Consensus 83 ~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 162 (706)
.+..+.|+|||++|+..+.+ +.|.++
T Consensus 120 -----~v~~v~~sp~~~~l~s~~~d-------------------------------------------------~~i~~w 145 (343)
T 2xzm_R 120 -----EVYSVAFSPDNRQILSAGAE-------------------------------------------------REIKLW 145 (343)
T ss_dssp -----CEEEEEECSSTTEEEEEETT-------------------------------------------------SCEEEE
T ss_pred -----cEEEEEECCCCCEEEEEcCC-------------------------------------------------CEEEEE
Confidence 27789999999988866421 456667
Q ss_pred ccCCC-ceecC---CC-ceEeeeeeCCCC----------cEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccC
Q 005240 163 SLDGT-AKDFG---TP-AVYTAVEPSPDQ----------KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL 227 (706)
Q Consensus 163 ~l~g~-~~~lt---~~-~~~~~~~~SpDG----------~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 227 (706)
++.+. ...+. .. ..+..++|+|++ .+|+..+.. ..|.+|+........+..+
T Consensus 146 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~h 212 (343)
T 2xzm_R 146 NILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-------------GRLKVWNTNFQIRYTFKAH 212 (343)
T ss_dssp ESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-------------SEEEEEETTTEEEEEEECC
T ss_pred eccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-------------CEEEEEcCCCceeEEEcCc
Confidence 77552 22222 12 567889999998 455443332 4799999665544444332
Q ss_pred CCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceec
Q 005240 228 PPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC 307 (706)
Q Consensus 228 ~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ws 307 (706)
. ..+..++|+|||+. |+... . ...|.+||+. ..+.+.........+..+.|+
T Consensus 213 ~-------------~~v~~~~~s~~g~~-l~sgs-~-----------dg~v~iwd~~--~~~~~~~~~~~~~~v~~v~~s 264 (343)
T 2xzm_R 213 E-------------SNVNHLSISPNGKY-IATGG-K-----------DKKLLIWDIL--NLTYPQREFDAGSTINQIAFN 264 (343)
T ss_dssp S-------------SCEEEEEECTTSSE-EEEEE-T-----------TCEEEEEESS--CCSSCSEEEECSSCEEEEEEC
T ss_pred c-------------ccceEEEECCCCCE-EEEEc-C-----------CCeEEEEECC--CCcccceeecCCCcEEEEEEC
Confidence 2 12457899999986 54321 1 1247788872 223333333345568899999
Q ss_pred CCCceEEEEeeccccceEEEEEcCCCCCCCceeeecC-ccccc----ccCCCCCceEeccCCCEEEEee
Q 005240 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR-VFENV----YSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~-~~~~~----~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
|++..++... + .. +.++++.+.+......... ..... ...+....++|+|+|++|+...
T Consensus 265 p~~~~la~~~-d--~~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 265 PKLQWVAVGT-D--QG--VKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp SSSCEEEEEE-S--SC--EEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred CCCCEEEEEC-C--CC--EEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 9998776543 2 23 5555665532221111110 00000 0111233578999999887754
No 200
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.34 E-value=1.8e-12 Score=143.84 Aligned_cols=138 Identities=18% Similarity=0.180 Sum_probs=103.9
Q ss_pred ceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHH-HHHHHCCeEEE
Q 005240 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFLARRFAVL 559 (706)
Q Consensus 481 ~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~G~~v~ 559 (706)
..+.++++..||..|.+.+|.|++ .+++|+||+.||.+... ..+..+. ..+ +.|+++||+|+
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~-----~~~~P~vv~~~~~g~~~--------~~~~~y~----~~~~~~la~~Gy~vv 70 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDA-----DGPVPVLLVRNPYDKFD--------VFAWSTQ----STNWLEFVRDGYAVV 70 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC-----SSCEEEEEEEESSCTTC--------HHHHHTT----TCCTHHHHHTTCEEE
T ss_pred EEEEEEEECCCCCEEEEEEEECCC-----CCCeeEEEEECCcCCCc--------cccccch----hhHHHHHHHCCCEEE
Confidence 457899999999999999999975 23589999998642110 0000010 123 78899999999
Q ss_pred EcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC-CC
Q 005240 560 AGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS-YN 638 (706)
Q Consensus 560 ~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~-~d 638 (706)
..+.||..+.+..+.. .....+|+.++++||.++.+.+ .||+++|+||||+++++++.+.|+.++|+|+.++. .|
T Consensus 71 ~~D~RG~G~S~g~~~~---~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d 146 (587)
T 3i2k_A 71 IQDTRGLFASEGEFVP---HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 146 (587)
T ss_dssp EEECTTSTTCCSCCCT---TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred EEcCCCCCCCCCcccc---ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccc
Confidence 9777755333222221 2356899999999999887766 79999999999999999999999999999999998 66
Q ss_pred C
Q 005240 639 K 639 (706)
Q Consensus 639 ~ 639 (706)
.
T Consensus 147 ~ 147 (587)
T 3i2k_A 147 Y 147 (587)
T ss_dssp C
T ss_pred c
Confidence 3
No 201
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.33 E-value=4.7e-11 Score=124.71 Aligned_cols=230 Identities=8% Similarity=0.059 Sum_probs=130.6
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..++||||++.|+-.. + ..|.++|+.+++...+.......-...+..++|+|||++|+..+.+
T Consensus 96 ~V~~~~~s~d~~~l~~s~---------d--g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---- 160 (357)
T 4g56_B 96 GVTDVAWVSEKGILVASD---------S--GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---- 160 (357)
T ss_dssp CEEEEEEETTTEEEEEET---------T--SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT----
T ss_pred CEEEEEEcCCCCEEEEEC---------C--CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC----
Confidence 478899999997665321 3 3566677777654332211000001237789999999998876421
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-ceEeeeeeCCCCcE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKY 188 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~SpDG~~ 188 (706)
+.|.++|+ +++ ...+... ..+..++|+|+++.
T Consensus 161 ---------------------------------------------g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 161 ---------------------------------------------FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp ---------------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred ---------------------------------------------CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 46777788 553 3444444 67889999999986
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~ 268 (706)
++++.... ..|.+||+..++........... ..+..++|+|++.. ++.....+
T Consensus 196 ~~~s~~~d------------g~v~~wd~~~~~~~~~~~~~~~~----------~~v~~v~~sp~~~~-~la~g~~d---- 248 (357)
T 4g56_B 196 IFLSCGED------------GRILLWDTRKPKPATRIDFCASD----------TIPTSVTWHPEKDD-TFACGDET---- 248 (357)
T ss_dssp CEEEEETT------------SCEEECCTTSSSCBCBCCCTTCC----------SCEEEEEECTTSTT-EEEEEESS----
T ss_pred eeeeeccC------------CceEEEECCCCceeeeeeecccc----------ccccchhhhhcccc-eEEEeecc----
Confidence 65554432 37999999865432222111111 11347899999877 43332111
Q ss_pred ccccCccceeeeecCCCCCCCC-ceEEeecccccccceecCCCce-EEEEeeccccceEEEEEcCCCCCCCceeeecCcc
Q 005240 269 NVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLA-LVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF 346 (706)
Q Consensus 269 ~~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~wspDg~~-l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 346 (706)
..|.++|+ .+++ .+.+......+..++|+||+.. |+..+ .+ + .|.++|+.++ +....... -
T Consensus 249 -------~~i~~wd~---~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs-~D-~--~i~iwd~~~~--~~~~~~~H-~ 311 (357)
T 4g56_B 249 -------GNVSLVNI---KNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS-ED-C--TVAVLDADFS--EVFRDLSH-R 311 (357)
T ss_dssp -------SCEEEEES---SCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE-TT-S--CEEEECTTSC--EEEEECCC-S
T ss_pred -------cceeEEEC---CCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe-CC-C--EEEEEECCCC--cEeEECCC-C
Confidence 24778888 4444 3445556778889999999865 44443 22 2 3666787773 33322211 1
Q ss_pred cccccCCCCCceEecc-CCCEEEEee
Q 005240 347 ENVYSDPGSPMMTRTS-TGTNVIAKI 371 (706)
Q Consensus 347 ~~~~~~~~~~~~~~s~-dg~~l~~~~ 371 (706)
. ....++|+| |+++|+...
T Consensus 312 ~------~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 312 D------FVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp S------CEEEEEECSSSTTEEEEEE
T ss_pred C------CEEEEEEeCCCCCEEEEEc
Confidence 1 123477898 788776543
No 202
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.33 E-value=5.1e-12 Score=125.47 Aligned_cols=168 Identities=13% Similarity=0.070 Sum_probs=110.7
Q ss_pred EEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCch
Q 005240 497 ATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND 576 (706)
Q Consensus 497 ~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~ 576 (706)
+.+|+|.....+ +++.|+||++||.+.. .. ....++..|+++||.|+.++.+++ +
T Consensus 34 ~~~~~p~~~~~~-g~~~p~vv~~HG~~~~-----------~~----~~~~~~~~l~~~G~~v~~~d~~~s---~------ 88 (258)
T 2fx5_A 34 CRIYRPRDLGQG-GVRHPVILWGNGTGAG-----------PS----TYAGLLSHWASHGFVVAAAETSNA---G------ 88 (258)
T ss_dssp EEEEEESSTTGG-GCCEEEEEEECCTTCC-----------GG----GGHHHHHHHHHHTCEEEEECCSCC---T------
T ss_pred EEEEeCCCCccc-CCCceEEEEECCCCCC-----------ch----hHHHHHHHHHhCCeEEEEecCCCC---c------
Confidence 788999763211 1258999999997421 11 112456778889999999887632 1
Q ss_pred hhHHHHHHHHHHHHHHHHHc---------CCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCC-------
Q 005240 577 RFVEQLVSSAEAAVEEVVRR---------GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT------- 640 (706)
Q Consensus 577 ~~~~~~~~D~~~~~~~l~~~---------~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~------- 640 (706)
...|+..+++++.+. ..+|.++++++||||||++++.++ .+.+++++++.+|.....
T Consensus 89 -----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~~~~~~~~ 161 (258)
T 2fx5_A 89 -----TGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGLGHDSASQ 161 (258)
T ss_dssp -----TSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSSTTCCGGGG
T ss_pred -----cHHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccccccchhhh
Confidence 012344556666542 246778999999999999999888 447899999988865411
Q ss_pred ---CCCcc---------chHHH-HHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhcc
Q 005240 641 ---LTPFG---------FQAER-FFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 641 ---~~~~~---------~~~~~-~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~ 697 (706)
..|.. ...+. ..+.++..+.+++++++++++|.+... ....+.+.+.+||+++|+.
T Consensus 162 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~-~~~~~~~~i~~fl~~~l~~ 230 (258)
T 2fx5_A 162 RRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVSHFEPVG-SGGAYRGPSTAWFRFQLMD 230 (258)
T ss_dssp GCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCCTTSSTT-TCGGGHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCCCccccc-hHHHHHHHHHHHHHHHhcC
Confidence 11211 11111 222223345679999999999987642 3457788999999988853
No 203
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.33 E-value=1.2e-11 Score=124.24 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=84.1
Q ss_pred eEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCC--------C
Q 005240 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS--------I 564 (706)
Q Consensus 493 ~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------~ 564 (706)
..+...||+|.+. ++|.|+||.+||+.. . ...||+|+.-++ +
T Consensus 90 ~~~~~~i~lP~~~----~~p~Pvii~i~~~~~-------------~-------------~~~G~a~~~~~~~~v~~~~~~ 139 (375)
T 3pic_A 90 ISFTVTITYPSSG----TAPYPAIIGYGGGSL-------------P-------------APAGVAMINFNNDNIAAQVNT 139 (375)
T ss_dssp EEEEEEEECCSSS----CSSEEEEEEETTCSS-------------C-------------CCTTCEEEEECHHHHSCCSSG
T ss_pred eEEEEEEECCCCC----CCCccEEEEECCCcc-------------c-------------cCCCeEEEEecccccccccCC
Confidence 5789999999752 357999999987521 0 347898876322 4
Q ss_pred CcCCCCCCCCc-----h--hhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 565 PIIGEGDKLPN-----D--RFVEQLVSSAEAAVEEVVRRG--VADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 565 ~~~g~g~~~~~-----~--~~~~~~~~D~~~~~~~l~~~~--~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
+++|+|. |.. . ..+....-|+..+++||.+++ .||++||+|+|+|+||.+|+++++.+ ++|+|+|+.++
T Consensus 140 gs~g~g~-f~~ly~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~ 217 (375)
T 3pic_A 140 GSRGQGK-FYDLYGSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQES 217 (375)
T ss_dssp GGTTCSH-HHHHHCTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESC
T ss_pred CCcccee-cccccCCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccC
Confidence 5556553 220 1 112233568999999999988 89999999999999999999999999 69999999875
Q ss_pred C
Q 005240 636 S 636 (706)
Q Consensus 636 ~ 636 (706)
.
T Consensus 218 g 218 (375)
T 3pic_A 218 G 218 (375)
T ss_dssp C
T ss_pred C
Confidence 3
No 204
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.32 E-value=2.5e-12 Score=139.13 Aligned_cols=169 Identities=19% Similarity=0.119 Sum_probs=115.3
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCC-eEEEEcCCC-CcC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSI-PII 567 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~~-~~~ 567 (706)
.|+ +...+|.|..- .+ ++|+||++|||++..++... . ......|+++| ++|+..++| +..
T Consensus 80 edc--L~l~v~~P~~~--~~--~~PviV~iHGGg~~~g~~~~--------~----~~~~~~la~~g~~vvv~~nYRlg~~ 141 (489)
T 1qe3_A 80 EDC--LYVNVFAPDTP--SQ--NLPVMVWIHGGAFYLGAGSE--------P----LYDGSKLAAQGEVIVVTLNYRLGPF 141 (489)
T ss_dssp SCC--CEEEEEEECSS--CC--SEEEEEEECCSTTTSCCTTS--------G----GGCCHHHHHHHTCEEEEECCCCHHH
T ss_pred CCC--CEEEEEeCCCC--CC--CCCEEEEECCCccccCCCCC--------c----ccCHHHHHhcCCEEEEecCccCccc
Confidence 454 55568889752 12 38999999999865322111 0 11245667665 999998988 444
Q ss_pred CCCCCCC--chhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEEEechHHHHHHHHHHhC--CCceeEEEeccCCCCCC
Q 005240 568 GEGDKLP--NDRFVEQLVSSAEAAVEEVVRRG---VADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKT 640 (706)
Q Consensus 568 g~g~~~~--~~~~~~~~~~D~~~~~~~l~~~~---~id~~~i~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~d~~ 640 (706)
|++.... .....+..+.|+..+++|+.+.. -+|++||.|+|+|+||++++.++... +++|+++|+.+|..++.
T Consensus 142 Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~ 221 (489)
T 1qe3_A 142 GFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTM 221 (489)
T ss_dssp HSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCB
T ss_pred ccCccccccccCCCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCC
Confidence 5543211 11223345789999999998852 26999999999999999999888753 57899999999976432
Q ss_pred C----------------CCc-c-------------------------------c-----------hHHHHHHHHHhCCCc
Q 005240 641 L----------------TPF-G-------------------------------F-----------QAERFFDALKGHGAL 661 (706)
Q Consensus 641 ~----------------~~~-~-------------------------------~-----------~~~~~~~~l~~~~~~ 661 (706)
. ++. . + +..+++++++..+++
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp 301 (489)
T 1qe3_A 222 TKEQAASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIP 301 (489)
T ss_dssp CHHHHHHHHHHHHHHHTCCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTCC
T ss_pred CHHHHHHHHHHHHHHcCCCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCCCCCCC
Confidence 1 000 0 0 112566666677899
Q ss_pred EEEEEeCCCCccCCC
Q 005240 662 SRLVLLPFEHHVYAA 676 (706)
Q Consensus 662 ~~~~~~~~~~H~~~~ 676 (706)
+.+-.+++|+|.+..
T Consensus 302 ~~~g~~~~Eg~~~~~ 316 (489)
T 1qe3_A 302 LLIGTTRDEGYLFFT 316 (489)
T ss_dssp EEEEEETTGGGGTCC
T ss_pred EEEeeecchhHhhcc
Confidence 999999999999864
No 205
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.32 E-value=6.8e-10 Score=118.23 Aligned_cols=245 Identities=15% Similarity=0.128 Sum_probs=152.0
Q ss_pred ceeEeecCCCCCCCCee-eeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 6 GIGIHRLLPDDSLGPEK-EVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
.|.|+|+.. ++.. .++... ..+..+.|+|||+.|+..+. + ..|.++|+.+++..+......
T Consensus 131 ~i~vwd~~~----~~~~~~l~~h~--~~V~~v~~~~~~~~l~sgs~--------D--~~i~iwd~~~~~~~~~~~~h~-- 192 (410)
T 1vyh_C 131 TIKVWDYET----GDFERTLKGHT--DSVQDISFDHSGKLLASCSA--------D--MTIKLWDFQGFECIRTMHGHD-- 192 (410)
T ss_dssp CEEEEETTT----CCCCEEECCCS--SCEEEEEECTTSSEEEEEET--------T--SCCCEEETTSSCEEECCCCCS--
T ss_pred eEEEEECCC----CcEEEEEeccC--CcEEEEEEcCCCCEEEEEeC--------C--CeEEEEeCCCCceeEEEcCCC--
Confidence 588889876 5433 333222 25888999999998877643 3 456666888877654432222
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
..+..+.|+|||+.|+..+.+ +.|.++|+
T Consensus 193 --~~V~~v~~~p~~~~l~s~s~D-------------------------------------------------~~i~~wd~ 221 (410)
T 1vyh_C 193 --HNVSSVSIMPNGDHIVSASRD-------------------------------------------------KTIKMWEV 221 (410)
T ss_dssp --SCEEEEEECSSSSEEEEEETT-------------------------------------------------SEEEEEET
T ss_pred --CCEEEEEEeCCCCEEEEEeCC-------------------------------------------------CeEEEEEC
Confidence 137789999999988866421 56788888
Q ss_pred -CCC-ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEE-cccCCCCCCCCcccCcc
Q 005240 165 -DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIPVCYNSV 240 (706)
Q Consensus 165 -~g~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~~~~~~~~~p~~~~~~ 240 (706)
+|. ...+... ..+..+.++|||+.|+..+.+ ..|.+|++.+++... +....
T Consensus 222 ~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D-------------~~v~vwd~~~~~~~~~~~~h~------------ 276 (410)
T 1vyh_C 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND-------------QTVRVWVVATKECKAELREHR------------ 276 (410)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCCEEEEECCCS------------
T ss_pred CCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC-------------CeEEEEECCCCceeeEecCCC------------
Confidence 554 3444444 567889999999988766543 379999998655433 32221
Q ss_pred CCCCcceeeecCCCc------------------eEEEEEeccCCCCccccCccceeeeecCCCCCCCC-ceEEeeccccc
Q 005240 241 REGMRSISWRADKPS------------------TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRF 301 (706)
Q Consensus 241 ~~g~~~~~~spdg~~------------------~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~ 301 (706)
..+..+.|+|++.. .++.... ....|.+||+ .++. ...+..+...+
T Consensus 277 -~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs-----------~D~~i~iwd~---~~~~~~~~~~~h~~~v 341 (410)
T 1vyh_C 277 -HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS-----------RDKTIKMWDV---STGMCLMTLVGHDNWV 341 (410)
T ss_dssp -SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE-----------TTSEEEEEET---TTTEEEEEEECCSSCE
T ss_pred -ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe-----------CCCeEEEEEC---CCCceEEEEECCCCcE
Confidence 11346678876421 0111111 1235888988 4443 33455567778
Q ss_pred ccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 302 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 302 ~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
..+.|+|+|+.|+..+. ...|.++|+.+++ ....+ ..... ....+.|+|++.+|+...
T Consensus 342 ~~v~~~~~g~~l~s~s~----D~~i~vwd~~~~~-~~~~~-~~h~~------~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 342 RGVLFHSGGKFILSCAD----DKTLRVWDYKNKR-CMKTL-NAHEH------FVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp EEEEECSSSSCEEEEET----TTEEEEECCTTSC-CCEEE-ECCSS------CEEEEEECSSSSCEEEEE
T ss_pred EEEEEcCCCCEEEEEeC----CCeEEEEECCCCc-eEEEE-cCCCC------cEEEEEEcCCCCEEEEEe
Confidence 89999999999887652 2246667776642 22222 21111 122477899999877654
No 206
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.32 E-value=2.9e-11 Score=121.56 Aligned_cols=190 Identities=13% Similarity=0.016 Sum_probs=120.7
Q ss_pred ceEEEEEEcc-CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 481 QKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 481 ~~~~~~~~~~-dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
+.+.+++.+. .+.++..+ .|+.+ . |+||++||.+... ....|... ....+.+++.||+|+
T Consensus 5 ~~~~~~~~s~~~~~~~~v~--~~p~~---~----~~v~llHG~~~~~------~~~~w~~~----~~~~~~l~~~~~~vv 65 (280)
T 1dqz_A 5 PVEYLQVPSASMGRDIKVQ--FQGGG---P----HAVYLLDGLRAQD------DYNGWDIN----TPAFEEYYQSGLSVI 65 (280)
T ss_dssp CEEEEEEEETTTTEEEEEE--EECCS---S----SEEEECCCTTCCS------SSCHHHHH----SCHHHHHTTSSSEEE
T ss_pred eEEEEEEECcccCceeEEE--EcCCC---C----CEEEEECCCCCCC------Cccccccc----CcHHHHHhcCCeEEE
Confidence 4566777764 56677755 45543 1 4788899973100 00011100 012345667899999
Q ss_pred EcCCCCcCCCCCCC---------CchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEE
Q 005240 560 AGPSIPIIGEGDKL---------PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCG 630 (706)
Q Consensus 560 ~~~~~~~~g~g~~~---------~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~ 630 (706)
+++.++..++.... ....+.....+|+... +.++..+++++++|+|+||||++|+.++.++|++|+++
T Consensus 66 ~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~---i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~ 142 (280)
T 1dqz_A 66 MPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAW---LQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYA 142 (280)
T ss_dssp EECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHH---HHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEE
T ss_pred EECCCCCccccCCCCCCccccccccccHHHHHHHHHHHH---HHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEE
Confidence 98776443332110 0112222223444444 43433367789999999999999999999999999999
Q ss_pred EeccCCCCCCC-----------------------------------------------CCc-------cc----------
Q 005240 631 IARSGSYNKTL-----------------------------------------------TPF-------GF---------- 646 (706)
Q Consensus 631 v~~~~~~d~~~-----------------------------------------------~~~-------~~---------- 646 (706)
++.+|.++... .|. ..
T Consensus 143 v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~ 222 (280)
T 1dqz_A 143 ASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPA 222 (280)
T ss_dssp EEESCCCCTTSTTHHHHHHHHHHHTTSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHH
T ss_pred EEecCcccccCcchhhhHHHHhhhccCcCHHHhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccch
Confidence 99998765321 000 00
Q ss_pred ---------hHHHHHHHHHhCC-CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHh
Q 005240 647 ---------QAERFFDALKGHG-ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYC 695 (706)
Q Consensus 647 ---------~~~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l 695 (706)
+..+++++|+++| +++++.+|++++|.+. .+...+...+.||.+.|
T Consensus 223 ~~~e~~~~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l 278 (280)
T 1dqz_A 223 KFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP---YWNEQLVAMKADIQHVL 278 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCCceEEEecCCCccChH---HHHHHHHHHHHHHHHHh
Confidence 1238999999999 9999999999999763 24556677788887766
No 207
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.31 E-value=7.8e-12 Score=124.74 Aligned_cols=158 Identities=16% Similarity=0.180 Sum_probs=112.3
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 590 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~ 590 (706)
.|+||++||.+.. ... ...++..|+++||.|+.++.+ |+|.+... .......++|+.+++
T Consensus 40 ~~~vv~~HG~~~~-----------~~~----~~~~~~~l~~~G~~v~~~d~~---G~G~s~~~~~~~~~~~~~~d~~~~i 101 (270)
T 3rm3_A 40 PVGVLLVHGFTGT-----------PHS----MRPLAEAYAKAGYTVCLPRLK---GHGTHYEDMERTTFHDWVASVEEGY 101 (270)
T ss_dssp SEEEEEECCTTCC-----------GGG----THHHHHHHHHTTCEEEECCCT---TCSSCHHHHHTCCHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCC-----------hhH----HHHHHHHHHHCCCEEEEeCCC---CCCCCccccccCCHHHHHHHHHHHH
Confidence 3899999996421 011 124567788899999997665 55554321 123556788999999
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCCC---------------------------C
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTLT---------------------------P 643 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~~---------------------------~ 643 (706)
+++.++ ..+++++|+|+||++++.++.++|+ ++++|+.+|..+.... .
T Consensus 102 ~~l~~~----~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
T 3rm3_A 102 GWLKQR----CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKE 176 (270)
T ss_dssp HHHHTT----CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCC
T ss_pred HHHHhh----CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHh
Confidence 999765 5799999999999999999999999 9999999986532100 0
Q ss_pred ccc-------------------------------------------hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccH
Q 005240 644 FGF-------------------------------------------QAERFFDALKGHGALSRLVLLPFEHHVYAARENV 680 (706)
Q Consensus 644 ~~~-------------------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~ 680 (706)
..+ ...++++.+. +.+++++++|+++|.+......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~ 254 (270)
T 3rm3_A 177 LAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGIS--STEKEIVRLRNSYHVATLDYDQ 254 (270)
T ss_dssp CCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSC--CSSEEEEEESSCCSCGGGSTTH
T ss_pred hcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcC--CCcceEEEeCCCCcccccCccH
Confidence 000 0013333332 2467999999999998765556
Q ss_pred HHHHHHHHHHHHHHh
Q 005240 681 MHVIWETDRWLQKYC 695 (706)
Q Consensus 681 ~~~~~~~~~f~~~~l 695 (706)
.++.+.+.+||+++.
T Consensus 255 ~~~~~~i~~fl~~~~ 269 (270)
T 3rm3_A 255 PMIIERSLEFFAKHA 269 (270)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 789999999999864
No 208
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.31 E-value=2e-11 Score=128.30 Aligned_cols=227 Identities=12% Similarity=0.054 Sum_probs=130.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..++|||||++||.... + ..|.++++.++..+.+.....+ ...+..+.|+|||++|+..+.+
T Consensus 13 ~v~~~~~s~~g~~l~~~~~--------d--~~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~d---- 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTA--------T--NQVELYEQDGNGWKHARTFSDH--DKIVTCVDWAPKSNRIVTCSQD---- 76 (377)
T ss_dssp CCSCCEECSSSSEEECCCS--------S--SCBCEEEEETTEEEECCCBCCC--SSCEEEEEECTTTCCEEEEETT----
T ss_pred cEEEEEECCCCCEEEEecC--------C--CEEEEEEccCCceEEEEEEecC--CceEEEEEEeCCCCEEEEEeCC----
Confidence 5889999999999987532 3 4555566666632222211211 1237789999999988876421
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC----ceecCCC-ceEeeeeeCCC
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT----AKDFGTP-AVYTAVEPSPD 185 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~----~~~lt~~-~~~~~~~~SpD 185 (706)
+.|.++++ +++ ...+... ..+..++|+||
T Consensus 77 ---------------------------------------------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (377)
T 3dwl_C 77 ---------------------------------------------RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN 111 (377)
T ss_dssp ---------------------------------------------SSEEEC------CCCCEEECCCCSSCEEEEECCTT
T ss_pred ---------------------------------------------CeEEEEEcCCCCceeeeeEecccCCceEEEEECCC
Confidence 45666777 333 2233333 67889999999
Q ss_pred CcEEEEEeeccCcccccccccccceEEEEecCCCe----eEEccc-CCCCCCCCcccCccCCCCcceeeecCCCceEEEE
Q 005240 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCD-LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (706)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l~~-~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~ 260 (706)
|+.|+..+.. ..|.+|++++++ .+.+.. .. ..+..+.|+||++. |+..
T Consensus 112 ~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~h~-------------~~v~~~~~~~~~~~-l~~~ 164 (377)
T 3dwl_C 112 EDKFAVGSGA-------------RVISVCYFEQENDWWVSKHLKRPLR-------------STILSLDWHPNNVL-LAAG 164 (377)
T ss_dssp SSCCEEEESS-------------SCEEECCC-----CCCCEEECSSCC-------------SCEEEEEECTTSSE-EEEE
T ss_pred CCEEEEEecC-------------CeEEEEEECCcccceeeeEeecccC-------------CCeEEEEEcCCCCE-EEEE
Confidence 9999876654 378999998664 344432 11 22457899999986 5433
Q ss_pred EeccCCCCccccCccceeeeecCCCCCCCC---------------ceEE---eecccccccceecCCCceEEEEeecccc
Q 005240 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEK---------------PEIL---HKLDLRFRSVSWCDDSLALVNETWYKTS 322 (706)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---------------~~~l---~~~~~~~~~~~wspDg~~l~~~~~~~~~ 322 (706)
. .+ ..|.+||+ ..++ ...+ ......+..+.|+|||+.|+..+.+
T Consensus 165 ~-~d-----------~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--- 226 (377)
T 3dwl_C 165 C-AD-----------RKAYVLSA---YVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHD--- 226 (377)
T ss_dssp E-SS-----------SCEEEEEE---CCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETT---
T ss_pred e-CC-----------CEEEEEEE---EecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCC---
Confidence 2 11 23666665 2111 0111 1345667889999999988876522
Q ss_pred ceEEEEEcCCCCCCCceee--ecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 323 QTRTWLVCPGSKDVAPRVL--FDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 323 ~~~l~~~d~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
..|.++|+.+++..+..+ ...... ....+.|+|||++|+...
T Consensus 227 -~~i~iwd~~~~~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 227 -SSVTIAYPSAPEQPPRALITVKLSQL------PLRSLLWANESAIVAAGY 270 (377)
T ss_dssp -TEEC-CEECSTTSCEEECCCEECSSS------CEEEEEEEETTEEEEEES
T ss_pred -CcEEEEECCCCCCcceeeEeecCCCC------ceEEEEEcCCCCEEEEEc
Confidence 246666666643211111 111111 122477899999886653
No 209
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.31 E-value=8.2e-11 Score=121.21 Aligned_cols=95 Identities=19% Similarity=0.185 Sum_probs=75.2
Q ss_pred cEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC--C---C---CCCCcc-----------------chHHHHHHHHHh
Q 005240 603 RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY--N---K---TLTPFG-----------------FQAERFFDALKG 657 (706)
Q Consensus 603 ~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~--d---~---~~~~~~-----------------~~~~~~~~~l~~ 657 (706)
++.++|||+||.+++.++.++|++++++|+.+|.. + . ...|.. -...++++.|.+
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~~~~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~ 278 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNA 278 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHH
T ss_pred CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCCCCHHHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999742 1 0 111210 123478899999
Q ss_pred CCCcEEEEEeCCCC-----ccCCCcccHHHHHHHHHHHHHHHhcc
Q 005240 658 HGALSRLVLLPFEH-----HVYAARENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 658 ~~~~~~~~~~~~~~-----H~~~~~~~~~~~~~~~~~f~~~~l~~ 697 (706)
.+.+++++++|+++ |.+....+..++.+.+.+||++++.+
T Consensus 279 ~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~~ 323 (328)
T 1qlw_A 279 AGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTAK 323 (328)
T ss_dssp TTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC-
T ss_pred hCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcccC
Confidence 99999999999555 98876655788999999999998754
No 210
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.30 E-value=6e-11 Score=120.78 Aligned_cols=128 Identities=13% Similarity=0.148 Sum_probs=87.1
Q ss_pred CceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEE
Q 005240 480 LQKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVL 559 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~ 559 (706)
...+.+.+.. +|..+....+.+..-. +..|+||++||.+.. ... ....+..|+++||.|+
T Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~p~vv~~hG~~~~-----------~~~----~~~~~~~l~~~g~~v~ 77 (315)
T 4f0j_A 18 YPVHYLDFTS-QGQPLSMAYLDVAPKK----ANGRTILLMHGKNFC-----------AGT----WERTIDVLADAGYRVI 77 (315)
T ss_dssp SCCEEEEEEE-TTEEEEEEEEEECCSS----CCSCEEEEECCTTCC-----------GGG----GHHHHHHHHHTTCEEE
T ss_pred ccceeEEEec-CCCCeeEEEeecCCCC----CCCCeEEEEcCCCCc-----------chH----HHHHHHHHHHCCCeEE
Confidence 3567777775 6666666555543311 235899999997421 011 1245677888999999
Q ss_pred EcCCCCcCCCCCCCCc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 560 AGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 560 ~~~~~~~~g~g~~~~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
..+.+ |+|.+... ........+|+..+++.+ +.+++.++|||+||++++.++.++|++++++++.+|.
T Consensus 78 ~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 148 (315)
T 4f0j_A 78 AVDQV---GFCKSSKPAHYQYSFQQLAANTHALLERL------GVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPI 148 (315)
T ss_dssp EECCT---TSTTSCCCSSCCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCS
T ss_pred EeecC---CCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCc
Confidence 97665 44444332 223445555555554432 4468999999999999999999999999999999985
No 211
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.30 E-value=5.7e-10 Score=115.84 Aligned_cols=223 Identities=14% Similarity=0.136 Sum_probs=127.7
Q ss_pred ceeEeecCCCCCCCCeeeeecCC--CCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYP--DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
.|.|.++.. ++......+. ....+..++|||||++||..+. ++...|| +..++....+....++
T Consensus 39 ~i~iw~~~~----~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~--------D~~v~iw--~~~~~~~~~~~~~~~h 104 (345)
T 3fm0_A 39 RIRIWGTEG----DSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF--------DATTCIW--KKNQDDFECVTTLEGH 104 (345)
T ss_dssp CEEEEEEET----TEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET--------TSCEEEE--EECCC-EEEEEEECCC
T ss_pred eEEEEEcCC----CcceeeeeeccccCCcEEEEEECCCCCEEEEEEC--------CCcEEEE--EccCCCeEEEEEccCC
Confidence 577888765 4322111111 2235888999999999988653 4444455 5555543222211111
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
...+..++|+|||++|+..+.+ +.|.+++
T Consensus 105 --~~~v~~v~~sp~~~~l~s~s~D-------------------------------------------------~~v~iwd 133 (345)
T 3fm0_A 105 --ENEVKSVAWAPSGNLLATCSRD-------------------------------------------------KSVWVWE 133 (345)
T ss_dssp --SSCEEEEEECTTSSEEEEEETT-------------------------------------------------SCEEEEE
T ss_pred --CCCceEEEEeCCCCEEEEEECC-------------------------------------------------CeEEEEE
Confidence 1137789999999998876431 4566667
Q ss_pred cC-C-Cc---eecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCccc
Q 005240 164 LD-G-TA---KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCY 237 (706)
Q Consensus 164 l~-g-~~---~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~ 237 (706)
+. + .. ..+... ..+..++|+|||+.|+..+.+ ..|.+|++..+....+....+..
T Consensus 134 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d-------------~~i~~w~~~~~~~~~~~~~~~h~------ 194 (345)
T 3fm0_A 134 VDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD-------------DTVKLYREEEDDWVCCATLEGHE------ 194 (345)
T ss_dssp ECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT-------------SCEEEEEEETTEEEEEEEECCCS------
T ss_pred CCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC-------------CcEEEEEecCCCEEEEEEecCCC------
Confidence 63 3 22 223333 578899999999998866544 36889988765433222222111
Q ss_pred CccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc------------e---EEee-ccccc
Q 005240 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP------------E---ILHK-LDLRF 301 (706)
Q Consensus 238 ~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~------------~---~l~~-~~~~~ 301 (706)
..+..++|+|||+. |+... .+ . .|.+|+.. ..+.. + .+.. ....+
T Consensus 195 ----~~v~~l~~sp~g~~-l~s~s-~D---~--------~v~iW~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 255 (345)
T 3fm0_A 195 ----STVWSLAFDPSGQR-LASCS-DD---R--------TVRIWRQY--LPGNEQGVACSGSDPSWKCICTLSGFHSRTI 255 (345)
T ss_dssp ----SCEEEEEECTTSSE-EEEEE-TT---S--------CEEEEEEE--CTTCTTCCCCC---CEEEEEEEECSSCSSCE
T ss_pred ----CceEEEEECCCCCE-EEEEe-CC---C--------eEEEeccc--cCCCCccceeeccCCccceeEEecCCCCCcE
Confidence 22457899999986 54332 11 1 24444431 01110 1 1111 34567
Q ss_pred ccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 302 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 302 ~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
..++|+|++..|+..+. ++..+||..+...
T Consensus 256 ~~v~~~~~~~~l~s~~~--d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 256 YDIAWCQLTGALATACG--DDAIRVFQEDPNS 285 (345)
T ss_dssp EEEEECTTTCCEEEEET--TSCEEEEEECTTS
T ss_pred EEEEEecCCCEEEEEeC--CCeEEEEEeCCCC
Confidence 88999999998887653 3456677766443
No 212
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.30 E-value=9.3e-10 Score=115.19 Aligned_cols=193 Identities=12% Similarity=0.109 Sum_probs=102.6
Q ss_pred eEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhcc
Q 005240 63 RVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLL 142 (706)
Q Consensus 63 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (706)
.+|.+|.++|+.+.+....... ...+..++|||||++|+....
T Consensus 17 ~~~~~d~~~g~l~~~~~~~~~~-~~~~~~~a~spdg~~l~~~~~------------------------------------ 59 (365)
T 1jof_A 17 FTVQFDDEKLTCKLIKRTEIPQ-DEPISWMTFDHERKNIYGAAM------------------------------------ 59 (365)
T ss_dssp EEEEEETTTTEEEEEEEEECCT-TCCCSEEEECTTSSEEEEEEB------------------------------------
T ss_pred EEEEEECCCCCEEEeeEEccCC-CCCCcEEEECCCCCEEEEEcc------------------------------------
Confidence 3444566778776664311000 012567899999998876532
Q ss_pred CCchhhhhhhhcccceEEEEcc--CCCceecCC---CceEeeeeeCCCCcEE-EEEeeccCccccccccc----ccceEE
Q 005240 143 KDEYDESLFDYYTTAQLVLGSL--DGTAKDFGT---PAVYTAVEPSPDQKYV-LITSMHRPYSYKVPCAR----FSQKVQ 212 (706)
Q Consensus 143 ~~~~d~~~~~~~~~~~l~~~~l--~g~~~~lt~---~~~~~~~~~SpDG~~i-~~~~~~~~~~~~~~~~~----~~~~i~ 212 (706)
..+.++++ +|+...+.. .+....++|||||++| +++....... .+.. ....+.
T Consensus 60 --------------~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~---~~~~~~~~~~g~v~ 122 (365)
T 1jof_A 60 --------------KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYA---VYANPFYKFAGYGN 122 (365)
T ss_dssp --------------TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCC---EEEEEESSSCCEEE
T ss_pred --------------ceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcce---eccceeecCCceEE
Confidence 13444444 454433321 1234468899999974 4444310000 0000 024677
Q ss_pred EEecC--CCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCC-CC
Q 005240 213 VWTTD--GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-GE 289 (706)
Q Consensus 213 ~~~~~--~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~ 289 (706)
+|+++ +...+.+....... ...+..+.|||||+. |+.. +. + .+.|+++++ + ++
T Consensus 123 v~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~spdG~~-l~~~-~~--~--------~~~v~~~~~---~~~g 178 (365)
T 1jof_A 123 VFSVSETGKLEKNVQNYEYQE---------NTGIHGMVFDPTETY-LYSA-DL--T--------ANKLWTHRK---LASG 178 (365)
T ss_dssp EEEECTTCCEEEEEEEEECCT---------TCCEEEEEECTTSSE-EEEE-ET--T--------TTEEEEEEE---CTTS
T ss_pred EEccCCCCcCcceEeeEEeCC---------CCcceEEEECCCCCE-EEEE-cC--C--------CCEEEEEEE---CCCC
Confidence 88876 33222222110000 012347799999986 6533 22 1 124788888 4 56
Q ss_pred CceEEeec-----ccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 290 KPEILHKL-----DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 290 ~~~~l~~~-----~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
+.+.+... ......++|+|||+.|++.. ..++...+|.++.+++
T Consensus 179 ~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~-~~~~~v~v~~~~~~~g 227 (365)
T 1jof_A 179 EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM-EAGNRICEYVIDPATH 227 (365)
T ss_dssp CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEE-TTTTEEEEEEECTTTC
T ss_pred CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEE-CCCCeEEEEEEeCCCC
Confidence 65443221 23466789999999887764 3334556777777553
No 213
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.29 E-value=3.3e-10 Score=119.74 Aligned_cols=227 Identities=12% Similarity=0.004 Sum_probs=133.4
Q ss_pred cceeEeecCCCCCCCC-------eeeeecCCCCCcccceeeCCC----C---CeEEEEeeccccccccCCceeEEEEEcC
Q 005240 5 TGIGIHRLLPDDSLGP-------EKEVHGYPDGAKINFVSWSPD----G---KRIAFSVRVDEEDNVSSCKLRVWIADAE 70 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~-------~~~i~~~~~~~~~~~~~~SPD----G---~~laf~~~~~~~~~~~~~~~~l~~~d~~ 70 (706)
..|.|+++.. ++ ...+.. ....+..+.|+|| | +.|+.... + ..|.++++.
T Consensus 36 g~i~iw~~~~----~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~g~~~~~l~s~~~--------d--g~i~iw~~~ 99 (397)
T 1sq9_A 36 GYLKVWDNKL----LDNENPKDKSYSHFV--HKSGLHHVDVLQAIERDAFELCLVATTSF--------S--GDLLFYRIT 99 (397)
T ss_dssp SEEEEEESBC----CTTCCGGGGEEEEEC--CTTCEEEEEEEEEEETTTEEEEEEEEEET--------T--SCEEEEEEE
T ss_pred CEEEEEECCC----cccccCCCcceEEec--CCCcEEEEEEecccccCCccccEEEEEcC--------C--CCEEEEEcc
Confidence 3688999977 55 444442 2235889999999 9 88877642 3 456667776
Q ss_pred CCc------eeecccCCCccccccccceEEe----cCCcE-EEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccch
Q 005240 71 TGE------AKPLFESPDICLNAVFGSFVWV----NNSTL-LIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTD 139 (706)
Q Consensus 71 ~g~------~~~lt~~~~~~~~~~~~~~~wS----pDg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (706)
+++ ...+...........+..+.|+ |+++. |+.....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------------------------------- 147 (397)
T 1sq9_A 100 REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------------------------------- 147 (397)
T ss_dssp ECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT--------------------------------
T ss_pred CCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC--------------------------------
Confidence 666 4444433100001237789999 99998 7765421
Q ss_pred hccCCchhhhhhhhcccceEEEEcc-C------C-Cce-----ecC-------CC-ceEeeeeeCCCCcEEEEEeeccCc
Q 005240 140 NLLKDEYDESLFDYYTTAQLVLGSL-D------G-TAK-----DFG-------TP-AVYTAVEPSPDQKYVLITSMHRPY 198 (706)
Q Consensus 140 ~~~~~~~d~~~~~~~~~~~l~~~~l-~------g-~~~-----~lt-------~~-~~~~~~~~SpDG~~i~~~~~~~~~ 198 (706)
+.|.++++ + + ... .+. .. ..+..++|+|+| .|+.....
T Consensus 148 -----------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d--- 206 (397)
T 1sq9_A 148 -----------------GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN--- 206 (397)
T ss_dssp -----------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT---
T ss_pred -----------------CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC---
Confidence 34555555 3 3 222 331 12 567899999999 66554432
Q ss_pred ccccccccccceEEEEecCCCeeEEcccC-CCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccce
Q 005240 199 SYKVPCARFSQKVQVWTTDGKLVRELCDL-PPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI 277 (706)
Q Consensus 199 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~ 277 (706)
..|.+|++...+....... ...... ...+..+.|+|+++. |+... .++ ..+.
T Consensus 207 ----------g~i~i~d~~~~~~~~~~~~~~~h~~~-------~~~i~~i~~~~~~~~-l~~~~-~d~--------~~g~ 259 (397)
T 1sq9_A 207 ----------GTVQISELSTLRPLYNFESQHSMINN-------SNSIRSVKFSPQGSL-LAIAH-DSN--------SFGC 259 (397)
T ss_dssp ----------SEEEEEETTTTEEEEEEECCC---CC-------CCCEEEEEECSSTTE-EEEEE-EET--------TEEE
T ss_pred ----------CcEEEEECCCCceeEEEecccccccc-------CCccceEEECCCCCE-EEEEe-cCC--------CCce
Confidence 3799999986554332222 000000 022457899999986 54332 110 0025
Q ss_pred eeeecCCCCCCCCce-EEee-------------cccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 278 IYTQPAEPAEGEKPE-ILHK-------------LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 278 l~~~d~~~~~~~~~~-~l~~-------------~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
|.+||+ ..++.. .+.. ....+..+.|+||++.|+..+. ...|.++|+.++
T Consensus 260 i~i~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~ 323 (397)
T 1sq9_A 260 ITLYET---EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW----DGKLRFWDVKTK 323 (397)
T ss_dssp EEEEET---TTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET----TSEEEEEETTTT
T ss_pred EEEEEC---CCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC----CCeEEEEEcCCC
Confidence 888888 444433 3444 5677889999999998887652 235777788774
No 214
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.29 E-value=1.9e-09 Score=111.58 Aligned_cols=242 Identities=10% Similarity=0.074 Sum_probs=143.7
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCc--ee---ecccC
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE--AK---PLFES 80 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~--~~---~lt~~ 80 (706)
.|.|.++.. ++...... .....+....|||||+.||.... + ..+.++++.+++ .+ .+..+
T Consensus 78 ~v~iWd~~~----~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~--------d--~~v~iw~~~~~~~~~~~~~~~~~h 142 (340)
T 1got_B 78 KLIIWDSYT----TNKVHAIP-LRSSWVMTCAYAPSGNYVACGGL--------D--NICSIYNLKTREGNVRVSRELAGH 142 (340)
T ss_dssp EEEEEETTT----CCEEEEEE-CSSSCEEEEEECTTSSEEEEEET--------T--CEEEEEETTTCSBSCEEEEEEECC
T ss_pred cEEEEECCC----CCcceEee-cCCccEEEEEECCCCCEEEEEeC--------C--CeEEEEECccCCCcceeEEEecCC
Confidence 477777755 44332211 12224778899999999987643 2 466667776543 11 12212
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEE
Q 005240 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (706)
Q Consensus 81 ~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~ 160 (706)
.. .+....|+++++ |+..+. .+.|.
T Consensus 143 ~~-----~v~~~~~~~~~~-l~s~s~-------------------------------------------------d~~i~ 167 (340)
T 1got_B 143 TG-----YLSCCRFLDDNQ-IVTSSG-------------------------------------------------DTTCA 167 (340)
T ss_dssp SS-----CEEEEEEEETTE-EEEEET-------------------------------------------------TSCEE
T ss_pred Cc-----cEEEEEECCCCc-EEEEEC-------------------------------------------------CCcEE
Confidence 22 266788999987 444321 14677
Q ss_pred EEcc-CCC-ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcc
Q 005240 161 LGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVC 236 (706)
Q Consensus 161 ~~~l-~g~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~ 236 (706)
++|+ +++ ...+... ..+..++|+|||+.|+..+.+ ..|.+||+..+.. ..+....
T Consensus 168 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d-------------~~v~~wd~~~~~~~~~~~~h~-------- 226 (340)
T 1got_B 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD-------------ASAKLWDVREGMCRQTFTGHE-------- 226 (340)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCSEEEEECCCS--------
T ss_pred EEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCC-------------CcEEEEECCCCeeEEEEcCCc--------
Confidence 7788 553 3444444 678899999999988755443 3799999986543 3333221
Q ss_pred cCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec---ccccccceecCCCceE
Q 005240 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL---DLRFRSVSWCDDSLAL 313 (706)
Q Consensus 237 ~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~~~~~~~~wspDg~~l 313 (706)
..+..+.|+|+++. |+... .+ ..|.+||+ ..++....... ...+..+.|+|||+.|
T Consensus 227 -----~~v~~v~~~p~~~~-l~s~s-~d-----------~~v~iwd~---~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 285 (340)
T 1got_B 227 -----SDINAICFFPNGNA-FATGS-DD-----------ATCRLFDL---RADQELMTYSHDNIICGITSVSFSKSGRLL 285 (340)
T ss_dssp -----SCEEEEEECTTSSE-EEEEE-TT-----------SCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred -----CCEEEEEEcCCCCE-EEEEc-CC-----------CcEEEEEC---CCCcEEEEEccCCcccceEEEEECCCCCEE
Confidence 12457899999986 54321 11 24778887 43332222222 2356788999999988
Q ss_pred EEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 314 VNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 314 ~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
+..+. ...|.++|+.++ +........-.. ...+.|+|||++|+...
T Consensus 286 ~~g~~----d~~i~vwd~~~~--~~~~~~~~h~~~------v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 286 LAGYD----DFNCNVWDALKA--DRAGVLAGHDNR------VSCLGVTDDGMAVATGS 331 (340)
T ss_dssp EEEET----TSEEEEEETTTC--CEEEEEECCSSC------EEEEEECTTSSCEEEEE
T ss_pred EEECC----CCeEEEEEcccC--cEeeEeecCCCc------EEEEEEcCCCCEEEEEc
Confidence 87652 234777777663 222222221111 22367899999887654
No 215
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.28 E-value=1.8e-09 Score=115.39 Aligned_cols=279 Identities=13% Similarity=0.132 Sum_probs=162.9
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~ 112 (706)
..-+.||++ +.||... ...|+++|+.+|+..++...... ...+..++|||||++|+..+.+
T Consensus 108 ~~~l~wS~~-n~lAvgl-----------d~tV~lWd~~tg~~~~~~~~~~~--~~~V~sv~fspdg~~lasgs~D----- 168 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-----------DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTSS----- 168 (420)
T ss_dssp CBCEEECTT-SEEEEEE-----------TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEETT-----
T ss_pred ceeEEECCC-CEEEEEe-----------CCEEEEEECCCCCEEEEEEecCC--CCcEEEEEECCCCCEEEEEECC-----
Confidence 345789986 4776643 25899999999988776543221 1237789999999998876431
Q ss_pred CCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-ceEeeeeeCCCCcEE
Q 005240 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYV 189 (706)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~SpDG~~i 189 (706)
+.|.++++ +++ .+.+... ..+..+ +++++.|
T Consensus 169 --------------------------------------------g~v~iWd~~~~~~~~~~~~h~~~v~~~--s~~~~~l 202 (420)
T 4gga_A 169 --------------------------------------------AEVQLWDVQQQKRLRNMTSHSARVGSL--SWNSYIL 202 (420)
T ss_dssp --------------------------------------------SCEEEEETTTTEEEEEECCCSSCEEEE--EEETTEE
T ss_pred --------------------------------------------CeEEEEEcCCCcEEEEEeCCCCceEEE--eeCCCEE
Confidence 56777788 553 3444433 444444 4567766
Q ss_pred EEEeeccCcccccccccccceEEEEecCCCe--eEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCC
Q 005240 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (706)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~ 267 (706)
+..+.. ..+.+|+..... +..+.... .....+.|+|+|+. |+... .+
T Consensus 203 ~sgs~d-------------~~i~~~d~~~~~~~~~~~~~h~-------------~~~~~~~~~~~g~~-l~s~~-~D--- 251 (420)
T 4gga_A 203 SSGSRS-------------GHIHHHDVRVAEHHVATLSGHS-------------QEVCGLRWAPDGRH-LASGG-ND--- 251 (420)
T ss_dssp EEEETT-------------SEEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSE-EEEEE-TT---
T ss_pred EEEeCC-------------CceeEeeecccceeeEEecccc-------------cceeeeeecCCCCe-eeeee-cc---
Confidence 544432 368888877432 23332221 11346789999986 54331 11
Q ss_pred CccccCccceeeeecCCCCCCCC-----ceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeee
Q 005240 268 ANVEVSPRDIIYTQPAEPAEGEK-----PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (706)
Q Consensus 268 ~~~~~~~~~~l~~~d~~~~~~~~-----~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 342 (706)
+.+.+++. ..++ ..........+..+.|+|++..+++.... .....|.++|+.++ +.....
T Consensus 252 --------~~v~i~~~---~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~g-s~D~~I~iwd~~t~--~~~~~~ 317 (420)
T 4gga_A 252 --------NLVNVWPS---APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSG--ACLSAV 317 (420)
T ss_dssp --------SCEEEEES---SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEEC-TTTCEEEEEETTTT--EEEEEE
T ss_pred --------ccceEEee---ccccccceeeeeecccCCceeeeeeCCCcccEEEEEee-cCCCEEEEEeCCcc--ccceee
Confidence 23667776 3332 22334456678889999998766654321 12235777788774 222222
Q ss_pred cCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhh
Q 005240 343 DRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 422 (706)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 422 (706)
.... ......|+++++.++..... ....|..+|..+++....+.+.
T Consensus 318 ~~~~-------~v~~~~~~~~~~~lv~~sg~-------------------~d~~I~iwd~~~~~~v~~l~gH-------- 363 (420)
T 4gga_A 318 DAHS-------QVCSILWSPHYKELISGHGF-------------------AQNQLVIWKYPTMAKVAELKGH-------- 363 (420)
T ss_dssp ECSS-------CEEEEEEETTTTEEEEEECT-------------------TTCCEEEEETTTCCEEEEECCC--------
T ss_pred cccc-------ceeeeeecCCCCeEEEEEec-------------------CCCEEEEEECCCCcEEEEEcCC--------
Confidence 2111 12236689999988776411 1124666787777654433321
Q ss_pred hhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCC
Q 005240 423 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLK 462 (706)
Q Consensus 423 ~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~ 462 (706)
......++|||||+.|+....+. .|.+|++...
T Consensus 364 ---~~~V~~l~~spdg~~l~S~s~D~----tvriWdv~~~ 396 (420)
T 4gga_A 364 ---TSRVLSLTMSPDGATVASAAADE----TLRLWRCFEL 396 (420)
T ss_dssp ---SSCEEEEEECTTSSCEEEEETTT----EEEEECCSCS
T ss_pred ---CCCEEEEEEcCCCCEEEEEecCC----eEEEEECCCC
Confidence 12223578999998777544433 4889987543
No 216
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.27 E-value=7.1e-10 Score=119.67 Aligned_cols=195 Identities=10% Similarity=0.031 Sum_probs=119.8
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcC--CCceeecccCCCccccccccceEEecCCcEEEEEecCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~--~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~ 109 (706)
.+..++|||||++|+++... + ..|.++++. +++..+..... .....+..+.|+|||++|++...
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~-------d--g~v~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~--- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADS-------D--KSLLVFDVDKTSKNVLKLRKRF--CFSKRPNAISIAEDDTTVIIADK--- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGG-------G--TEEEEEEECSSSSSCEEEEEEE--ECSSCEEEEEECTTSSEEEEEET---
T ss_pred ceEEEEEcCCCCEEEEEECC-------C--CeEEEEECcCCCCceeeeeecc--cCCCCceEEEEcCCCCEEEEEeC---
Confidence 47789999999998665532 3 345555655 66544432110 00112678999999999887642
Q ss_pred CCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCce-----ecCCC-ceEeeeee
Q 005240 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-----DFGTP-AVYTAVEP 182 (706)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~-----~lt~~-~~~~~~~~ 182 (706)
.+.++.+++ +++.. .+... ..+..++|
T Consensus 170 ----------------------------------------------~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 203 (450)
T 2vdu_B 170 ----------------------------------------------FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHL 203 (450)
T ss_dssp ----------------------------------------------TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEE
T ss_pred ----------------------------------------------CCcEEEEecCCcccccccceeeecccCceEEEEE
Confidence 157888888 44332 22222 57889999
Q ss_pred CCC---CcEEEEEeeccCcccccccccccceEEEEecCCCe-eEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEE
Q 005240 183 SPD---QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (706)
Q Consensus 183 SpD---G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~ 258 (706)
+|| |++|+..+.. ..|.+|++.+++ +..+..... ..+..+.|+ |++. |+
T Consensus 204 sp~~~~~~~l~s~~~d-------------~~i~vwd~~~~~~~~~~~~~h~------------~~v~~~~~s-d~~~-l~ 256 (450)
T 2vdu_B 204 IKDSDGHQFIITSDRD-------------EHIKISHYPQCFIVDKWLFGHK------------HFVSSICCG-KDYL-LL 256 (450)
T ss_dssp EECTTSCEEEEEEETT-------------SCEEEEEESCTTCEEEECCCCS------------SCEEEEEEC-STTE-EE
T ss_pred cCCCCCCcEEEEEcCC-------------CcEEEEECCCCceeeeeecCCC------------CceEEEEEC-CCCE-EE
Confidence 999 8888765543 379999998554 333221110 224578999 8886 55
Q ss_pred EEEeccCCCCccccCccceeeeecCCCCCCCCceE-Eee-------------------------cccccccceecCCCce
Q 005240 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHK-------------------------LDLRFRSVSWCDDSLA 312 (706)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~-l~~-------------------------~~~~~~~~~wspDg~~ 312 (706)
... . ...|.+||+ .+++... +.. ....+..+.|+||++.
T Consensus 257 s~~-~-----------d~~v~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 257 SAG-G-----------DDKIFAWDW---KTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp EEE-S-----------SSEEEEEET---TTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred EEe-C-----------CCeEEEEEC---CCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 332 1 125888888 5555433 321 1234667899999999
Q ss_pred EEEEeeccccceEEEEE
Q 005240 313 LVNETWYKTSQTRTWLV 329 (706)
Q Consensus 313 l~~~~~~~~~~~~l~~~ 329 (706)
|++... .++...||.+
T Consensus 322 l~~~~~-~d~~i~iw~~ 337 (450)
T 2vdu_B 322 VAFFVE-ATKCIIILEM 337 (450)
T ss_dssp EEEEET-TCSEEEEEEE
T ss_pred EEEEEC-CCCeEEEEEe
Confidence 887652 2344455555
No 217
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.27 E-value=5.9e-10 Score=116.08 Aligned_cols=145 Identities=13% Similarity=0.156 Sum_probs=90.4
Q ss_pred cccceeeCCC---CCeEEEEeeccccccccCCceeEEEEEcCCCce-eecccCCCccccccccceEEecC----CcEEEE
Q 005240 32 KINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNN----STLLIF 103 (706)
Q Consensus 32 ~~~~~~~SPD---G~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt~~~~~~~~~~~~~~~wSpD----g~~l~~ 103 (706)
.+..++|||+ +..++++... + ..|.++++.+++. +.+...........+..+.|+|+ |++|+.
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~-------~--~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVG-------S--NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEE-------T--TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred ceEEEEEecccCCCCceEEEECC-------C--CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 5788999985 6655555431 2 3677788776543 33322111111123678899999 667776
Q ss_pred EecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc-eecCCC-ceEeee
Q 005240 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP-AVYTAV 180 (706)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~-~~lt~~-~~~~~~ 180 (706)
... .+.|.++++ +++. ..+... ..+..+
T Consensus 91 ~~~-------------------------------------------------dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 91 AGS-------------------------------------------------RGIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp EET-------------------------------------------------TCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred ecC-------------------------------------------------CCEEEEEEchhceEeeeecCCCCcEEEE
Confidence 542 157888888 4543 344433 678999
Q ss_pred eeCC-CCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccC-CCCCCCCcccCccCCCCcceeeecCCCceEE
Q 005240 181 EPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL-PPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (706)
Q Consensus 181 ~~Sp-DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~ 258 (706)
+|+| +++.|+..+.. ..|.+|++..++....... .... ..+..+.|+|+++. |+
T Consensus 122 ~~~~~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~-l~ 177 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKD-------------HALRLWNIQTDTLVAIFGGVEGHR----------DEVLSADYDLLGEK-IM 177 (366)
T ss_dssp EECSSCTTEEEEEETT-------------SCEEEEETTTTEEEEEECSTTSCS----------SCEEEEEECTTSSE-EE
T ss_pred EECCCCCCEEEEEeCC-------------CeEEEEEeecCeEEEEeccccccc----------CceeEEEECCCCCE-EE
Confidence 9999 88888765543 3799999986654443211 1111 22457899999986 54
No 218
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.27 E-value=1.1e-11 Score=126.69 Aligned_cols=190 Identities=17% Similarity=0.176 Sum_probs=119.1
Q ss_pred CceEEEEEEcc-CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-----
Q 005240 480 LQKEMIKYQRK-DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA----- 553 (706)
Q Consensus 480 ~~~~~~~~~~~-dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----- 553 (706)
.+.+.+++.+. -|.+...++|+|+++++. ..+||+|+++||... +.. .......++.
T Consensus 10 ~~v~~~~~~S~~l~~~r~~~VylP~~y~~~-~~~yPVlylldG~~~---------------f~~-~~~~~~~l~~~~~~~ 72 (331)
T 3gff_A 10 VEYQSKRLESRLLKETREYVIALPEGYAQS-LEAYPVVYLLDGEDQ---------------FDH-MASLLQFLSQGTMPQ 72 (331)
T ss_dssp -CEEEEEEEETTTTEEEEEEEECCTTGGGS-CCCEEEEEESSHHHH---------------HHH-HHHHHHHHTCSSSCS
T ss_pred ceEEEEEEEecCCCCeEEEEEEeCCCCCCC-CCCccEEEEecChhh---------------hHH-HHHHHHHHHhhhhcC
Confidence 45677778775 578999999999998753 236999999998410 100 0012233432
Q ss_pred -CCeEEEEcCCCC-------c----CCCCC----CC----CchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHH
Q 005240 554 -RRFAVLAGPSIP-------I----IGEGD----KL----PNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGA 613 (706)
Q Consensus 554 -~G~~v~~~~~~~-------~----~g~g~----~~----~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG 613 (706)
.+++|+.++... . ...|. .+ ....+...+.+ .++.++.++..+++.| +|+|+||||
T Consensus 73 ~~~~IvV~i~~~~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~---el~p~i~~~~~~~~~r-~i~G~S~GG 148 (331)
T 3gff_A 73 IPKVIIVGIHNTNRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEK---ELAPSIESQLRTNGIN-VLVGHSFGG 148 (331)
T ss_dssp SCCCEEEEECCSSHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHH---THHHHHHHHSCEEEEE-EEEEETHHH
T ss_pred CCCEEEEEECCCCcccccCCCccccccccccccccCCCCCcHHHHHHHHHH---HHHHHHHHHCCCCCCe-EEEEECHHH
Confidence 357777643310 0 00010 00 11222222223 3455666666677655 899999999
Q ss_pred HHHHHHHHhCCCceeEEEeccCCCCCCCC------------------C-------ccc------------hHHHHHHHHH
Q 005240 614 FMTAHLLAHAPHLFCCGIARSGSYNKTLT------------------P-------FGF------------QAERFFDALK 656 (706)
Q Consensus 614 ~~a~~~~~~~p~~~~a~v~~~~~~d~~~~------------------~-------~~~------------~~~~~~~~l~ 656 (706)
++|++++.++|++|+++++.+|.+.+... + ... ...+|+++|+
T Consensus 149 ~~al~~~~~~p~~F~~~~~~S~~~w~~~~~~~~~~~~~~~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk 228 (331)
T 3gff_A 149 LVAMEALRTDRPLFSAYLALDTSLWFDSPHYLTLLEERVVKGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAFADKLT 228 (331)
T ss_dssp HHHHHHHHTTCSSCSEEEEESCCTTTTTTHHHHHHHHHHHHCCCSSEEEEEEECCCSEETTTEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCchhhheeeEeCchhcCChHHHHHHHHHHhhcccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998743210 0 001 1248899999
Q ss_pred hC---CCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHH
Q 005240 657 GH---GALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 694 (706)
Q Consensus 657 ~~---~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~ 694 (706)
.. |+++++.+|||++|.... .......++||-..
T Consensus 229 ~~~~~g~~~~~~~~pg~~H~sv~----~~~~~~~l~~lf~~ 265 (331)
T 3gff_A 229 KLAPKGLGFMAKYYPEETHQSVS----HIGLYDGIRHLFKD 265 (331)
T ss_dssp HHCCTTEEEEEEECTTCCTTTHH----HHHHHHHHHHHHGG
T ss_pred hccCCCceEEEEECCCCCccccH----HHHHHHHHHHHHhh
Confidence 86 778999999999997543 34445555555443
No 219
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.27 E-value=2.3e-10 Score=122.76 Aligned_cols=159 Identities=8% Similarity=0.102 Sum_probs=94.7
Q ss_pred ceEEEEccCCCceecCCC------ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee--------E
Q 005240 157 AQLVLGSLDGTAKDFGTP------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--------R 222 (706)
Q Consensus 157 ~~l~~~~l~g~~~~lt~~------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~ 222 (706)
+.+.+++.++....+. . ..+.+++|||||++|+..+.+ ..|.+|++.++.. .
T Consensus 107 g~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D-------------GtVkIWd~~~~~l~~~~~i~l~ 172 (588)
T 2j04_A 107 GNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED-------------GELQFFSIRKNSENTPEFYFES 172 (588)
T ss_dssp SCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT-------------SEEEEEECCCCTTTCCCCEEEE
T ss_pred CcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC-------------CEEEEEECCCCccccccceeee
Confidence 4455556544333333 3 148899999999999877654 3799999997642 3
Q ss_pred EcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce----EEe-ec
Q 005240 223 ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE----ILH-KL 297 (706)
Q Consensus 223 ~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~----~l~-~~ 297 (706)
.+........ ..+..++||||| . ++ .. . + ..+++|++ +++... .|. .+
T Consensus 173 ti~~~~~gh~---------~~V~sVawSPdg-L-aa-ss-~---D--------~tVrlWd~---~~~~~~~~~~tL~~~h 225 (588)
T 2j04_A 173 SIRLSDAGSK---------DWVTHIVWYEDV-L-VA-AL-S---N--------NSVFSMTV---SASSHQPVSRMIQNAS 225 (588)
T ss_dssp EEECSCTTCC---------CCEEEEEEETTE-E-EE-EE-T---T--------CCEEEECC---CSSSSCCCEEEEECCC
T ss_pred eeeccccccc---------ccEEEEEEcCCc-E-EE-Ee-C---C--------CeEEEEEC---CCCccccceeeecccc
Confidence 3322111110 225588999999 2 32 21 1 1 24788888 555532 353 34
Q ss_pred ccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEe--ccCCCEEEEee
Q 005240 298 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR--TSTGTNVIAKI 371 (706)
Q Consensus 298 ~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--s~dg~~l~~~~ 371 (706)
...+..++|+ |+.|+.+. + ..|.++|+.++ +...+..+....+ ..+.+ +|||..|+...
T Consensus 226 ~~~V~svaFs--g~~LASa~---~--~tIkLWd~~~~--~~~~~~~gh~~~V------~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 226 RRKITDLKIV--DYKVVLTC---P--GYVHKIDLKNY--SISSLKTGSLENF------HIIPLNHEKESTILLMSN 286 (588)
T ss_dssp SSCCCCEEEE--TTEEEEEC---S--SEEEEEETTTT--EEEEEECSCCSCC------CEEEETTCSSCEEEEECS
T ss_pred cCcEEEEEEE--CCEEEEEe---C--CeEEEEECCCC--eEEEEEcCCCceE------EEEEeeeCCCCCEEEEEc
Confidence 5789999999 57777654 1 35777887773 2222221222222 23678 99997776654
No 220
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.26 E-value=2.7e-09 Score=112.93 Aligned_cols=200 Identities=17% Similarity=0.170 Sum_probs=125.0
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~ 112 (706)
+..+.|||||++||.... ...|.++|+++++.......... .+..+.|+|||++|+..+.+
T Consensus 126 v~~v~~s~dg~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~h~~----~v~~~~~~p~~~~l~s~s~d----- 186 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAE----------DRLIRIWDIENRKIVMILQGHEQ----DIYSLDYFPSGDKLVSGSGD----- 186 (393)
T ss_dssp EEEEEECTTSSEEEEEET----------TSCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETT-----
T ss_pred EEEEEECCCCCEEEEEcC----------CCeEEEEECCCCcEEEEEccCCC----CEEEEEEcCCCCEEEEecCC-----
Confidence 668899999999987642 25778889888876554432221 27789999999988876421
Q ss_pred CCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCce-ecCCCceEeeeeeCC-CCcEE
Q 005240 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTPAVYTAVEPSP-DQKYV 189 (706)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~-~lt~~~~~~~~~~Sp-DG~~i 189 (706)
+.|.++|+ +++.. .+.....+..++|+| ||++|
T Consensus 187 --------------------------------------------~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (393)
T 1erj_A 187 --------------------------------------------RTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 222 (393)
T ss_dssp --------------------------------------------SEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred --------------------------------------------CcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEE
Confidence 56777788 55332 333335678899999 88888
Q ss_pred EEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCC
Q 005240 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (706)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~ 268 (706)
+..+.. ..|.+||+.++.. ..+....... ......+..+.|+|||+. |+.. ..+
T Consensus 223 ~~~s~d-------------~~v~iwd~~~~~~~~~~~~~~~~~------~~h~~~v~~v~~~~~g~~-l~s~-s~d---- 277 (393)
T 1erj_A 223 AAGSLD-------------RAVRVWDSETGFLVERLDSENESG------TGHKDSVYSVVFTRDGQS-VVSG-SLD---- 277 (393)
T ss_dssp EEEETT-------------SCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSE-EEEE-ETT----
T ss_pred EEEcCC-------------CcEEEEECCCCcEEEeecccccCC------CCCCCCEEEEEECCCCCE-EEEE-eCC----
Confidence 766543 3789999986543 3332111000 000022457899999986 5422 111
Q ss_pred ccccCccceeeeecCCCCCCCC-------------ceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 269 NVEVSPRDIIYTQPAEPAEGEK-------------PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 269 ~~~~~~~~~l~~~d~~~~~~~~-------------~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
..|.+||+. ... ...+..+...+..+.|+|+++.|+..+. ...|.++|+.++
T Consensus 278 -------~~v~~wd~~---~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~----D~~v~iwd~~~~ 342 (393)
T 1erj_A 278 -------RSVKLWNLQ---NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK----DRGVLFWDKKSG 342 (393)
T ss_dssp -------SEEEEEEC------------------CEEEEEECCSSCEEEEEECGGGCEEEEEET----TSEEEEEETTTC
T ss_pred -------CEEEEEECC---CCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC----CCeEEEEECCCC
Confidence 246777762 211 1123344566788999999998887652 234777787774
No 221
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.26 E-value=6.1e-10 Score=118.55 Aligned_cols=215 Identities=11% Similarity=0.068 Sum_probs=132.7
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
.|.|++... .....+.. ....+..+.|+|||+.|+.... ...|.++++.+++..+.........
T Consensus 131 ~i~i~~~~~----~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~ 194 (425)
T 1r5m_A 131 ELRLWNKTG----ALLNVLNF--HRAPIVSVKWNKDGTHIISMDV----------ENVTILWNVISGTVMQHFELKETGG 194 (425)
T ss_dssp CEEEEETTS----CEEEEECC--CCSCEEEEEECTTSSEEEEEET----------TCCEEEEETTTTEEEEEECCC----
T ss_pred eEEEEeCCC----CeeeeccC--CCccEEEEEECCCCCEEEEEec----------CCeEEEEECCCCcEEEEeeccccCc
Confidence 467777322 34444432 2335889999999999987642 3568888888776555432222100
Q ss_pred -----------cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhc
Q 005240 86 -----------NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYY 154 (706)
Q Consensus 86 -----------~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 154 (706)
...+..+.|+|++.. +...
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------------------------------------------- 224 (425)
T 1r5m_A 195 SSINAENHSGDGSLGVDVEWVDDDKF-VIPG------------------------------------------------- 224 (425)
T ss_dssp -----------CCCBSCCEEEETTEE-EEEC-------------------------------------------------
T ss_pred cceeeccccCCcceeeEEEEcCCCEE-EEEc-------------------------------------------------
Confidence 000567889998763 4332
Q ss_pred ccceEEEEcc-CCC-ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCC
Q 005240 155 TTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPA 230 (706)
Q Consensus 155 ~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~ 230 (706)
..+.|+++++ +++ ...+... ..+..++|+|||+.|+..... ..|.+|++..++. ..+....
T Consensus 225 ~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~~-- 289 (425)
T 1r5m_A 225 PKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDD-------------GTLRIWHGGNGNSQNCFYGHS-- 289 (425)
T ss_dssp GGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETT-------------SCEEEECSSSBSCSEEECCCS--
T ss_pred CCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCC-------------CEEEEEECCCCccceEecCCC--
Confidence 1267888898 443 3344433 678899999999988766543 3799999986543 3332111
Q ss_pred CCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceE-EeecccccccceecCC
Q 005240 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLRFRSVSWCDD 309 (706)
Q Consensus 231 ~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~-l~~~~~~~~~~~wspD 309 (706)
..+..+.|+|++ . |+... . ...|.++|+ ..++... +......+..+.|+||
T Consensus 290 -----------~~i~~~~~~~~~-~-l~~~~-~-----------d~~i~i~d~---~~~~~~~~~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 290 -----------QSIVSASWVGDD-K-VISCS-M-----------DGSVRLWSL---KQNTLLALSIVDGVPIFAGRISQD 341 (425)
T ss_dssp -----------SCEEEEEEETTT-E-EEEEE-T-----------TSEEEEEET---TTTEEEEEEECTTCCEEEEEECTT
T ss_pred -----------ccEEEEEECCCC-E-EEEEe-C-----------CCcEEEEEC---CCCcEeEecccCCccEEEEEEcCC
Confidence 124478999999 4 55332 1 125888888 4444433 3344677889999999
Q ss_pred CceEEEEeeccccceEEEEEcCCC
Q 005240 310 SLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
++.|+....+ + .|.++|+.+
T Consensus 342 ~~~l~~~~~d--g--~i~i~~~~~ 361 (425)
T 1r5m_A 342 GQKYAVAFMD--G--QVNVYDLKK 361 (425)
T ss_dssp SSEEEEEETT--S--CEEEEECHH
T ss_pred CCEEEEEECC--C--eEEEEECCC
Confidence 9988876522 3 355555554
No 222
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.26 E-value=2.7e-09 Score=112.31 Aligned_cols=255 Identities=13% Similarity=0.074 Sum_probs=148.7
Q ss_pred cceeEeecCCCCCCCCeeeeecC-CCCCcccceeeCC-CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCC
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGY-PDGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD 82 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~-~~~~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~ 82 (706)
..|.|+++.. ++...+..+ .....+..+.||| |++.|+... ....|.++|+.+...+.+.....
T Consensus 96 g~i~iwd~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~ 161 (383)
T 3ei3_B 96 GDIILWDYDV----QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS----------IRGATTLRDFSGSVIQVFAKTDS 161 (383)
T ss_dssp SCEEEEETTS----TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE----------TTTEEEEEETTSCEEEEEECCCC
T ss_pred CeEEEEeCCC----cccceeeecCCcCCceeEEEeCCCCCCEEEEEe----------CCCEEEEEECCCCceEEEeccCC
Confidence 3688899876 555554432 2334688999999 667776653 23578888888766665543321
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEE
Q 005240 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (706)
Q Consensus 83 ~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 162 (706)
....+..+.|+||++.|+.... .+.|.++
T Consensus 162 --~~~~v~~~~~~~~~~~l~~~~~-------------------------------------------------d~~i~i~ 190 (383)
T 3ei3_B 162 --WDYWYCCVDVSVSRQMLATGDS-------------------------------------------------TGRLLLL 190 (383)
T ss_dssp --SSCCEEEEEEETTTTEEEEEET-------------------------------------------------TSEEEEE
T ss_pred --CCCCeEEEEECCCCCEEEEECC-------------------------------------------------CCCEEEE
Confidence 1123678999999998887642 1578888
Q ss_pred ccCC-CceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC----CeeEEcccCCCCCCCCcc
Q 005240 163 SLDG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG----KLVRELCDLPPAEDIPVC 236 (706)
Q Consensus 163 ~l~g-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~~~~~~~p~~ 236 (706)
++++ ....+... ..+..++|+|++++++++.... ..|.+||+.. +.........
T Consensus 191 d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~-------- 250 (383)
T 3ei3_B 191 GLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD------------ATVKLWDLRNIKDKNSYIAEMPHE-------- 250 (383)
T ss_dssp ETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT------------SEEEEEEGGGCCSTTCEEEEEECS--------
T ss_pred ECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC------------CEEEEEeCCCCCcccceEEEecCC--------
Confidence 8876 44445444 6789999999999544444332 3799999985 3222222211
Q ss_pred cCccCCCCcceeeec-CCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecc------cccccceecCC
Q 005240 237 YNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD------LRFRSVSWCDD 309 (706)
Q Consensus 237 ~~~~~~g~~~~~~sp-dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~------~~~~~~~wspD 309 (706)
..+..+.|+| |++. |+... . .+.|.+||+. .+.....+.... .......|+|+
T Consensus 251 -----~~v~~~~~s~~~~~~-l~~~~-~-----------d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 310 (383)
T 3ei3_B 251 -----KPVNAAYFNPTDSTK-LLTTD-Q-----------RNEIRVYSSY--DWSKPDQIIIHPHRQFQHLTPIKATWHPM 310 (383)
T ss_dssp -----SCEEEEEECTTTSCE-EEEEE-S-----------SSEEEEEETT--BTTSCSEEEECCBCCCTTSCCCCCEECSS
T ss_pred -----CceEEEEEcCCCCCE-EEEEc-C-----------CCcEEEEECC--CCccccccccccccccccccceEEeccCC
Confidence 2245789999 9986 55332 1 1257888883 222334444221 11122456666
Q ss_pred CceEEEEeec-----cccceEEEEEcCCCCCCCceeeecCcccccccCCCCC-ceEeccCCCEEEEee
Q 005240 310 SLALVNETWY-----KTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSP-MMTRTSTGTNVIAKI 371 (706)
Q Consensus 310 g~~l~~~~~~-----~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~ 371 (706)
+..++..... .+....|.++|+.+++ ......... ..+.. .+.|+|||++|+...
T Consensus 311 ~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~--~~~~l~~~~-----~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 311 YDLIVAGRYPDDQLLLNDKRTIDIYDANSGG--LVHQLRDPN-----AAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp SSEEEEECBCCTTTCTTCCCCEEEEETTTCC--EEEEECBTT-----BCSCCCEEEECTTSSEEEEEE
T ss_pred CCceEEEecCCcccccCCCCeEEEEecCCCc--eeeeecCCC-----CCceEEEEEEecCccEEEEec
Confidence 6555433210 0123457777877742 222222110 01112 247999999887653
No 223
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.26 E-value=3.9e-09 Score=109.92 Aligned_cols=243 Identities=9% Similarity=0.042 Sum_probs=142.0
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCc-------eeecc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-------AKPLF 78 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~-------~~~lt 78 (706)
.|.|+++.. ++.......+ ...+...+|||||+.||.... ++ .+.++++.... ...+.
T Consensus 87 ~v~vWd~~~----~~~~~~~~~~-~~~v~~~~~sp~g~~lasg~~--------d~--~i~v~~~~~~~~~~~~~~~~~~~ 151 (354)
T 2pbi_B 87 KVIVWDSFT----TNKEHAVTMP-CTWVMACAYAPSGCAIACGGL--------DN--KCSVYPLTFDKNENMAAKKKSVA 151 (354)
T ss_dssp EEEEEETTT----CCEEEEEECS-SSCCCEEEECTTSSEEEEEST--------TS--EEEEEECCCCTTCCSGGGCEEEE
T ss_pred eEEEEECCC----CCcceEEecC-CCCEEEEEECCCCCEEEEeeC--------CC--CEEEEEEeccccccccccceeee
Confidence 467777765 5443332222 235788999999999987642 33 44445543321 12222
Q ss_pred cCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccce
Q 005240 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (706)
Q Consensus 79 ~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (706)
.+.. .+..+.|+|+++.|+..+.+ +.
T Consensus 152 ~h~~-----~v~~~~~~~~~~~l~t~s~D-------------------------------------------------~~ 177 (354)
T 2pbi_B 152 MHTN-----YLSACSFTNSDMQILTASGD-------------------------------------------------GT 177 (354)
T ss_dssp ECSS-----CEEEEEECSSSSEEEEEETT-------------------------------------------------SE
T ss_pred ccCC-----cEEEEEEeCCCCEEEEEeCC-------------------------------------------------Cc
Confidence 1222 26688999999988866421 56
Q ss_pred EEEEcc-CCCc-eecCCC-ceEeeeeeCC--CCcEEEEEeeccCcccccccccccceEEEEecCCCeeE-EcccCCCCCC
Q 005240 159 LVLGSL-DGTA-KDFGTP-AVYTAVEPSP--DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAED 232 (706)
Q Consensus 159 l~~~~l-~g~~-~~lt~~-~~~~~~~~Sp--DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~ 232 (706)
|.++|+ +++. ..+... ..+..+.|+| +|+.|+..+.+ ..|.+||+.+++.. .+..+.
T Consensus 178 v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D-------------g~v~~wd~~~~~~~~~~~~h~---- 240 (354)
T 2pbi_B 178 CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD-------------KKAMVWDMRSGQCVQAFETHE---- 240 (354)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT-------------SCEEEEETTTCCEEEEECCCS----
T ss_pred EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC-------------CeEEEEECCCCcEEEEecCCC----
Confidence 778888 5543 344433 5677788877 56777655443 37999999865543 332221
Q ss_pred CCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec---ccccccceecCC
Q 005240 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL---DLRFRSVSWCDD 309 (706)
Q Consensus 233 ~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~~~~~~~~wspD 309 (706)
..+..++|+|+++. |+... .+ ..|.+||+ ..++...+... ...+..+.|+||
T Consensus 241 ---------~~v~~v~~~p~~~~-l~s~s-~D-----------~~v~lwd~---~~~~~~~~~~~~~~~~~~~~~~~s~~ 295 (354)
T 2pbi_B 241 ---------SDVNSVRYYPSGDA-FASGS-DD-----------ATCRLYDL---RADREVAIYSKESIIFGASSVDFSLS 295 (354)
T ss_dssp ---------SCEEEEEECTTSSE-EEEEE-TT-----------SCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred ---------CCeEEEEEeCCCCE-EEEEe-CC-----------CeEEEEEC---CCCcEEEEEcCCCcccceeEEEEeCC
Confidence 12457899999985 54321 11 24778887 33332222222 224567889999
Q ss_pred CceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 310 SLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 310 g~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
|+.|+....+ + .|.++|+.++ +.......... ....+.|+|||++|+...
T Consensus 296 g~~l~~g~~d--~--~i~vwd~~~~--~~~~~l~~h~~------~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 296 GRLLFAGYND--Y--TINVWDVLKG--SRVSILFGHEN------RVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp SSEEEEEETT--S--CEEEEETTTC--SEEEEECCCSS------CEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEECC--C--cEEEEECCCC--ceEEEEECCCC------cEEEEEECCCCCEEEEEc
Confidence 9988876522 2 3666677663 22222221111 122478999999887764
No 224
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.26 E-value=3.1e-11 Score=115.33 Aligned_cols=172 Identities=12% Similarity=0.034 Sum_probs=114.0
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCch--HHHHHHHCCeEEEEcCCCCcCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPT--SSLIFLARRFAVLAGPSIPIIG 568 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~G~~v~~~~~~~~~g 568 (706)
+|..++++.+.|++ + .+.|+||++||.+.. ...+ .. .+..|+++||.|+.++.+|
T Consensus 15 ~g~~l~~~~~~p~~---~--~~~~~vv~~hG~~~~-----------~~~~----~~~~~~~~l~~~G~~v~~~d~~g--- 71 (210)
T 1imj_A 15 QGQALFFREALPGS---G--QARFSVLLLHGIRFS-----------SETW----QNLGTLHRLAQAGYRAVAIDLPG--- 71 (210)
T ss_dssp TTEEECEEEEECSS---S--CCSCEEEECCCTTCC-----------HHHH----HHHTHHHHHHHTTCEEEEECCTT---
T ss_pred CCeEEEEEEeCCCC---C--CCCceEEEECCCCCc-----------ccee----ecchhHHHHHHCCCeEEEecCCC---
Confidence 78999999999865 1 135899999997421 0111 12 3667888999999977653
Q ss_pred CCCCCCch--hhHHHHH--HHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC---
Q 005240 569 EGDKLPND--RFVEQLV--SSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--- 641 (706)
Q Consensus 569 ~g~~~~~~--~~~~~~~--~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~--- 641 (706)
+|.+.... ....... +|+..+++.+ +.++++++|+|+||++++.++.++|++++++++.+|......
T Consensus 72 ~g~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 145 (210)
T 1imj_A 72 LGHSKEAAAPAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKINAA 145 (210)
T ss_dssp SGGGTTSCCSSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGSCHH
T ss_pred CCCCCCCCCcchhhhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccccch
Confidence 33222111 1111112 4555555544 346899999999999999999999999999999998764321
Q ss_pred ------CCcc-------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 005240 642 ------TPFG-------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 693 (706)
Q Consensus 642 ------~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~ 693 (706)
.|.. .-..+..+.+ +.-...+++++++++|.+.. .....+.+.+.+||++
T Consensus 146 ~~~~~~~p~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~H~~~~-~~~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 146 NYASVKTPALIVYGDQDPMGQTSFEHL-KQLPNHRVLIMKGAGHPCYL-DKPEEWHTGLLDFLQG 208 (210)
T ss_dssp HHHTCCSCEEEEEETTCHHHHHHHHHH-TTSSSEEEEEETTCCTTHHH-HCHHHHHHHHHHHHHT
T ss_pred hhhhCCCCEEEEEcCcccCCHHHHHHH-hhCCCCCEEEecCCCcchhh-cCHHHHHHHHHHHHHh
Confidence 1210 0123455566 55567899999999998642 2355677788888865
No 225
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.26 E-value=3.5e-09 Score=107.53 Aligned_cols=274 Identities=12% Similarity=0.065 Sum_probs=159.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..+.| |||++|+.... ...|.++++++++......... ..+..+.|+||++.|+.....
T Consensus 20 ~v~~~~~-~~~~~l~s~~~----------dg~v~vw~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d---- 80 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSR----------DGTVRLWSKDDQWLGTVVYTGQ----GFLNSVCYDSEKELLLFGGKD---- 80 (313)
T ss_dssp CEEEEEE-EETTEEEEEET----------TSEEEEEEESSSEEEEEEEECS----SCEEEEEEETTTTEEEEEETT----
T ss_pred CcEEEEe-cCCCEEEEEEc----------CCcEEEEECCCCEEEEEeecCC----ccEEEEEECCCCCEEEEecCC----
Confidence 5888899 99999987642 2567777877776554432221 137789999999998876431
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC---C-ceecCCC-ceEeeeeeCCC
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG---T-AKDFGTP-AVYTAVEPSPD 185 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g---~-~~~lt~~-~~~~~~~~SpD 185 (706)
+.+.++++ +. + ...+... ..+..+.| +
T Consensus 81 ---------------------------------------------g~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~ 113 (313)
T 3odt_A 81 ---------------------------------------------TMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--Q 113 (313)
T ss_dssp ---------------------------------------------SCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--E
T ss_pred ---------------------------------------------CeEEEEEeeecCCCCcccchhhcccCEEEEEe--c
Confidence 34555555 22 1 2333333 56677777 6
Q ss_pred CcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeec-CCCceEEEEEecc
Q 005240 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQD 264 (706)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~sp-dg~~~l~~~~~~~ 264 (706)
++.|+..+.. ..+.+|+ .+.....+.... .....+.|+| +++. |+... .+
T Consensus 114 ~~~l~~~~~d-------------~~i~~~d-~~~~~~~~~~~~-------------~~v~~~~~~~~~~~~-l~~~~-~d 164 (313)
T 3odt_A 114 DGVVISGSWD-------------KTAKVWK-EGSLVYNLQAHN-------------ASVWDAKVVSFSENK-FLTAS-AD 164 (313)
T ss_dssp TTEEEEEETT-------------SEEEEEE-TTEEEEEEECCS-------------SCEEEEEEEETTTTE-EEEEE-TT
T ss_pred CCEEEEEeCC-------------CCEEEEc-CCcEEEecccCC-------------CceeEEEEccCCCCE-EEEEE-CC
Confidence 7777655543 3788998 444344443322 1234678888 6664 44331 11
Q ss_pred CCCCccccCccceeeeecCCCCCCCCceEEee-cccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeec
Q 005240 265 RGDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFD 343 (706)
Q Consensus 265 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~ 343 (706)
..|.++|. ......+.. ....+..+.|+|+++ ++... ....|.++|+.++ +....+.
T Consensus 165 -----------~~i~i~d~----~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~----~dg~i~i~d~~~~--~~~~~~~ 222 (313)
T 3odt_A 165 -----------KTIKLWQN----DKVIKTFSGIHNDVVRHLAVVDDGH-FISCS----NDGLIKLVDMHTG--DVLRTYE 222 (313)
T ss_dssp -----------SCEEEEET----TEEEEEECSSCSSCEEEEEEEETTE-EEEEE----TTSEEEEEETTTC--CEEEEEE
T ss_pred -----------CCEEEEec----CceEEEEeccCcccEEEEEEcCCCe-EEEcc----CCCeEEEEECCch--hhhhhhh
Confidence 23667765 122233333 567788899999999 55543 2235778888774 3333222
Q ss_pred CcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhh
Q 005240 344 RVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAV 423 (706)
Q Consensus 344 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 423 (706)
..... ...+.|+|+|. ++.... ...+..+|+.+++.........
T Consensus 223 ~~~~~------i~~~~~~~~~~-l~~~~~---------------------dg~v~iwd~~~~~~~~~~~~~~-------- 266 (313)
T 3odt_A 223 GHESF------VYCIKLLPNGD-IVSCGE---------------------DRTVRIWSKENGSLKQVITLPA-------- 266 (313)
T ss_dssp CCSSC------EEEEEECTTSC-EEEEET---------------------TSEEEEECTTTCCEEEEEECSS--------
T ss_pred cCCce------EEEEEEecCCC-EEEEec---------------------CCEEEEEECCCCceeEEEeccC--------
Confidence 21111 22477899994 443321 1136667877776555443322
Q ss_pred hhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeE
Q 005240 424 ALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (706)
Q Consensus 424 ~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~ 466 (706)
.......|+||++ ++....+ ..|++|++.+++...
T Consensus 267 ---~~i~~~~~~~~~~-~~~~~~d----g~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 267 ---ISIWSVDCMSNGD-IIVGSSD----NLVRIFSQEKSRWAS 301 (313)
T ss_dssp ---SCEEEEEECTTSC-EEEEETT----SCEEEEESCGGGCCC
T ss_pred ---ceEEEEEEccCCC-EEEEeCC----CcEEEEeCCCCceee
Confidence 1123578999998 4433332 359999988765433
No 226
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.25 E-value=4.2e-09 Score=107.36 Aligned_cols=245 Identities=11% Similarity=0.052 Sum_probs=145.5
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
.|.|.++.. ++..+... .....+..+.|||||+.|+.... ...|.++|+.+++..........
T Consensus 46 ~i~iw~~~~----~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~----------d~~i~vwd~~~~~~~~~~~~~~~-- 108 (312)
T 4ery_A 46 LIKIWGAYD----GKFEKTIS-GHKLGISDVAWSSDSNLLVSASD----------DKTLKIWDVSSGKCLKTLKGHSN-- 108 (312)
T ss_dssp CEEEEETTT----CCEEEEEC-CCSSCEEEEEECTTSSEEEEEET----------TSEEEEEETTTCCEEEEEECCSS--
T ss_pred eEEEEeCCC----cccchhhc-cCCCceEEEEEcCCCCEEEEECC----------CCEEEEEECCCCcEEEEEcCCCC--
Confidence 477777765 55443321 12235888999999999988642 25788889888775543322211
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-
Q 005240 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL- 164 (706)
Q Consensus 86 ~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l- 164 (706)
.+..+.|+|+++.|+..+.+ +.|.++|+
T Consensus 109 --~v~~~~~~~~~~~l~s~~~d-------------------------------------------------~~i~iwd~~ 137 (312)
T 4ery_A 109 --YVFCCNFNPQSNLIVSGSFD-------------------------------------------------ESVRIWDVK 137 (312)
T ss_dssp --CEEEEEECSSSSEEEEEETT-------------------------------------------------SCEEEEETT
T ss_pred --CEEEEEEcCCCCEEEEEeCC-------------------------------------------------CcEEEEECC
Confidence 26788999999988876421 56778888
Q ss_pred CCC-ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccC
Q 005240 165 DGT-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVR 241 (706)
Q Consensus 165 ~g~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~ 241 (706)
+++ ...+... ..+..+.|+|||+.|+..+.. ..|.+||+..++. +.+.....
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~~wd~~~~~~~~~~~~~~~------------ 192 (312)
T 4ery_A 138 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD-------------GLCRIWDTASGQCLKTLIDDDN------------ 192 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEETTTCCEEEEECCSSC------------
T ss_pred CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCceeeEEeccCC------------
Confidence 453 3444444 678899999999988766543 3799999986543 33322211
Q ss_pred CCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceE-Eeecccc--cccceec-CCCceEEEEe
Q 005240 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LHKLDLR--FRSVSWC-DDSLALVNET 317 (706)
Q Consensus 242 ~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~-l~~~~~~--~~~~~ws-pDg~~l~~~~ 317 (706)
.....+.|+|+++. |+... . .+.|.+||+ ..++... +...... .....|+ +++..|+..+
T Consensus 193 ~~~~~~~~~~~~~~-l~~~~-~-----------d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~ 256 (312)
T 4ery_A 193 PPVSFVKFSPNGKY-ILAAT-L-----------DNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 256 (312)
T ss_dssp CCEEEEEECTTSSE-EEEEE-T-----------TTEEEEEET---TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECC
T ss_pred CceEEEEECCCCCE-EEEEc-C-----------CCeEEEEEC---CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEEC
Confidence 11336799999986 54331 1 124788888 4443322 3222222 1223444 5567666543
Q ss_pred eccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 318 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 318 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
. ...|.++|+.++ +....+...... ...++|+|++..++...
T Consensus 257 -~---dg~i~vwd~~~~--~~~~~~~~h~~~------v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 257 -E---DNLVYIWNLQTK--EIVQKLQGHTDV------VISTACHPTENIIASAA 298 (312)
T ss_dssp -T---TSCEEEEETTTC--CEEEEECCCSSC------EEEEEECSSSSEEEEEE
T ss_pred -C---CCEEEEEECCCc--hhhhhhhccCCc------EEEEeecCcCCceEEEE
Confidence 2 224667777763 233322222111 12367899999877653
No 227
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.25 E-value=9.9e-09 Score=112.98 Aligned_cols=328 Identities=9% Similarity=-0.010 Sum_probs=179.4
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcC--CCce-eecccCC
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEA-KPLFESP 81 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~--~g~~-~~lt~~~ 81 (706)
..|.+.|+++ ++... .++.+.....+.+||||++|+.. + ....|.++|+. +++. .++..+
T Consensus 177 ~~V~viD~~t----~~v~~--~i~~g~~p~~v~~SpDGr~lyv~-~---------~dg~V~viD~~~~t~~~v~~i~~G- 239 (567)
T 1qks_A 177 GQIALIDGST----YEIKT--VLDTGYAVHISRLSASGRYLFVI-G---------RDGKVNMIDLWMKEPTTVAEIKIG- 239 (567)
T ss_dssp TEEEEEETTT----CCEEE--EEECSSCEEEEEECTTSCEEEEE-E---------TTSEEEEEETTSSSCCEEEEEECC-
T ss_pred CeEEEEECCC----CeEEE--EEeCCCCccceEECCCCCEEEEE-c---------CCCeEEEEECCCCCCcEeEEEecC-
Confidence 4677888866 54432 33456556789999999998553 3 12479999985 5443 223211
Q ss_pred CccccccccceEEe----cCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccc
Q 005240 82 DICLNAVFGSFVWV----NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (706)
Q Consensus 82 ~~~~~~~~~~~~wS----pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 157 (706)
. ....+.+| |||++|++... ...
T Consensus 240 ~-----~P~~ia~s~~~~pDGk~l~v~n~------------------------------------------------~~~ 266 (567)
T 1qks_A 240 S-----EARSIETSKMEGWEDKYAIAGAY------------------------------------------------WPP 266 (567)
T ss_dssp S-----EEEEEEECCSTTCTTTEEEEEEE------------------------------------------------ETT
T ss_pred C-----CCceeEEccccCCCCCEEEEEEc------------------------------------------------cCC
Confidence 1 25678999 79999887632 114
Q ss_pred eEEEEcc-CCCce-ecCCC------------ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEE
Q 005240 158 QLVLGSL-DGTAK-DFGTP------------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE 223 (706)
Q Consensus 158 ~l~~~~l-~g~~~-~lt~~------------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 223 (706)
++.++|. +.++. .+... ..+..+..|+++..+++.... ...|+++|....+...
T Consensus 267 ~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~------------~g~v~~vd~~~~~~~~ 334 (567)
T 1qks_A 267 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE------------TGKILLVDYTDLNNLK 334 (567)
T ss_dssp EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT------------TTEEEEEETTCSSEEE
T ss_pred eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC------------CCeEEEEecCCCccce
Confidence 5666676 33332 22111 134567789998776665533 3488888887543222
Q ss_pred cccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec-cc---
Q 005240 224 LCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DL--- 299 (706)
Q Consensus 224 l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~--- 299 (706)
++..... .....+.|+|||+. ++... . ..+.|.++|. +++++..+... ..
T Consensus 335 v~~i~~~-----------~~~~d~~~~pdgr~-~~va~-~----------~sn~V~ViD~---~t~kl~~~i~vgg~~Ph 388 (567)
T 1qks_A 335 TTEISAE-----------RFLHDGGLDGSHRY-FITAA-N----------ARNKLVVIDT---KEGKLVAIEDTGGQTPH 388 (567)
T ss_dssp EEEEECC-----------SSEEEEEECTTSCE-EEEEE-G----------GGTEEEEEET---TTTEEEEEEECSSSSBC
T ss_pred eeeeecc-----------ccccCceECCCCCE-EEEEe-C----------CCCeEEEEEC---CCCcEEEEEeccCcCCC
Confidence 2221111 11236689999997 54332 1 1235788888 56655443332 11
Q ss_pred cccccee-cCCCceEEEEeeccccceEEEEEcCCCCCCC---ceee--ecCcccccccCCCCCceEeccCCCEEEEeeec
Q 005240 300 RFRSVSW-CDDSLALVNETWYKTSQTRTWLVCPGSKDVA---PRVL--FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKK 373 (706)
Q Consensus 300 ~~~~~~w-spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~---~~~l--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 373 (706)
....+.| +|++..++++... +...|.++|.++.+.. .+.+ .+.. ..+...+..+|||+++++....
T Consensus 389 pg~g~~~~~p~~g~v~~t~~~--g~~~Vsvid~~~~~~~~~~~kvv~~i~~~------g~g~~~i~~~p~~~~l~v~~~~ 460 (567)
T 1qks_A 389 PGRGANFVHPTFGPVWATSHM--GDDSVALIGTDPEGHPDNAWKILDSFPAL------GGGSLFIKTHPNSQYLYVDATL 460 (567)
T ss_dssp CTTCEEEEETTTEEEEEEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEECS------CSCCCCEECCTTCSEEEEECTT
T ss_pred CccceeeECCCCCcEEEeCCC--CCCeEEEecCCCCCCccccCEEEEEEecC------CCCCEEEEeCCCCCeEEEecCC
Confidence 1123344 7887777655422 2335778887763211 1111 1111 1233456679999998886421
Q ss_pred cCCcceEEEEecCCCCCCC-CCCceeeeecCCC-----ce--eeeecccchhhhhhhhhhccCCCceecccCCCEEEEEE
Q 005240 374 ENDEQIYILLNGRGFTPEG-NIPFLDLFDINTG-----SK--ERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSK 445 (706)
Q Consensus 374 ~~~~~~~~~~~~~g~~~~~-~~~~l~~~d~~~g-----~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~ 445 (706)
.+|. ....+..+|+++. .. +.+.-.+. ..+...-.....+.|++||+++.++.
T Consensus 461 ---------------~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~G~~~~~s~ 521 (567)
T 1qks_A 461 ---------------NPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEW----AGITEGQPRVVQGEFNKDGTEVWFSV 521 (567)
T ss_dssp ---------------CSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHH----HTCCSSCCEEEEEEECTTSSEEEEEE
T ss_pred ---------------CCCcccCceEEEEECCcccccccCCCcEEeccccc----cccCCCCcceEeeeECCCCCEEEEEe
Confidence 0110 0113566776654 11 22210000 00000000012478999999999886
Q ss_pred ecCC-CCcEEEEEECCCCceeEe
Q 005240 446 ESKT-EITQYHILSWPLKKSSQI 467 (706)
Q Consensus 446 ~~~~-~p~~v~~~~~~~~~~~~l 467 (706)
.+.+ ....|.++|.++++++..
T Consensus 522 ~~~~~~~~~i~v~D~~t~~~~~~ 544 (567)
T 1qks_A 522 WNGKDQESALVVVDDKTLELKHV 544 (567)
T ss_dssp ECCTTSCCEEEEEETTTTEEEEE
T ss_pred ecCCCCCCcEEEEECCCceEEEE
Confidence 6543 567899999998876543
No 228
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.25 E-value=7.7e-09 Score=108.09 Aligned_cols=303 Identities=10% Similarity=0.010 Sum_probs=153.2
Q ss_pred eeCCCCCeEEEEeeccccccccCCce---eEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCC
Q 005240 37 SWSPDGKRIAFSVRVDEEDNVSSCKL---RVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (706)
Q Consensus 37 ~~SPDG~~laf~~~~~~~~~~~~~~~---~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~ 113 (706)
..+||++++ |+.+. .+.. .|+++|+++++...-..... .. .+.+||||++||+.........
T Consensus 27 ~~~~~~~~~-yv~~~-------~~~~~~~~v~v~D~~t~~~~~~i~~g~-----~p-~i~~spDg~~lyv~n~~~~~~~- 91 (373)
T 2mad_H 27 APGADGRRS-YINLP-------AHHSAIIQQWVLDAGSGSILGHVNGGF-----LP-NPVAAHSGSEFALASTSFSRIA- 91 (373)
T ss_pred cCCCCCCEE-EEeCC-------cccCCccEEEEEECCCCeEEEEecCCC-----CC-CeEECCCCCEEEEEeccccccc-
Confidence 445899765 66541 0122 88999999887543222111 13 8899999999887632100000
Q ss_pred CCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc-eecCC--------CceEeeeeeC
Q 005240 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGT--------PAVYTAVEPS 183 (706)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~-~~lt~--------~~~~~~~~~S 183 (706)
.+ .....|.++|+ +++. ..+.. +.....+.||
T Consensus 92 ------rg--------------------------------~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~s 133 (373)
T 2mad_H 92 ------KG--------------------------------KRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANT 133 (373)
T ss_pred ------cC--------------------------------CCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEEC
Confidence 00 01145777777 3322 22211 1234578999
Q ss_pred CCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEc-ccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEe
Q 005240 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~ 262 (706)
|||++|++..... ...|.++| +++++... ....+ .+...|+++. .++..
T Consensus 134 pDG~~l~v~n~~~-----------~~~v~viD-~t~~~~~~~i~~~~----------------~~~~~~~~~~-~~~~~- 183 (373)
T 2mad_H 134 PNNADLLFFQFAA-----------GPAVGLVV-QGGSSDDQLLSSPT----------------CYHIHPGAPS-TFYLL- 183 (373)
T ss_pred CCCCEEEEEecCC-----------CCeEEEEE-CCCCEEeEEcCCCc----------------eEEEEeCCCc-eEEEE-
Confidence 9999998876432 24799999 87655432 32221 1123334333 22111
Q ss_pred ccCCCCccccCccceeeeecCCCCCCCCce-EE------eecccccccceecCCCceEEEEeeccccceEEEEEcCCCCC
Q 005240 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPE-IL------HKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (706)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l------~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~ 335 (706)
...+ .+..++. . ++.. .. .........+.+++++..+++.+ . ..+++.+|+.+..
T Consensus 184 ~~dg----------~~~~vd~---~-g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~---~~~v~vid~~~~~ 245 (373)
T 2mad_H 184 CAQG----------GLAKTDH---A-GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-Y---SGKILQADISAAG 245 (373)
T ss_pred cCCC----------CEEEEEC---C-CcEEEEEeccccccCCcceeecceeEecCCEEEEEc-C---CceEEEEeccCCc
Confidence 1100 1111111 0 1111 00 00111123456778877777664 2 2379999998742
Q ss_pred CCceeeecCcc-----cccccCCCCC-ceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceee
Q 005240 336 VAPRVLFDRVF-----ENVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKER 409 (706)
Q Consensus 336 ~~~~~l~~~~~-----~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~ 409 (706)
.+.+....+ ......|+.. .+.++|||+++++..... . .+ +.......|+.+|+++++..+
T Consensus 246 --~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~-~---------~~-~~~~~~~~V~VID~~t~~vv~ 312 (373)
T 2mad_H 246 --ATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQ-S---------AW-KLHAAAKEVTSVTGLVGQTSS 312 (373)
T ss_pred --ceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccC-C---------cc-cccCCCCeEEEEECCCCEEEE
Confidence 222211111 0111122221 134566666665543110 0 00 000112358899999988744
Q ss_pred eecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEe
Q 005240 410 IWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQI 467 (706)
Q Consensus 410 l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~l 467 (706)
-+.... .-..+.|||||++++|+.... -..|.++|+++++....
T Consensus 313 ~i~~g~------------~p~~i~~s~Dg~~~l~v~~~~--~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 313 QISLGH------------DVDAISVAQDGGPDLYALSAG--TEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EEECCC------------CcCeEEECCCCCeEEEEEcCC--CCeEEEEECCCCCEEee
Confidence 443322 123578999999677765432 25799999998876654
No 229
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.25 E-value=1e-10 Score=118.86 Aligned_cols=111 Identities=14% Similarity=0.173 Sum_probs=83.3
Q ss_pred eEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcC--------CC
Q 005240 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP--------SI 564 (706)
Q Consensus 493 ~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~--------~~ 564 (706)
..+...||+|.+ ++|.|+||.+||+. + ....||+++.-+ .+
T Consensus 123 ~sf~~~i~lP~g-----~~P~Pvii~~~~~~-------------~-------------~~~~G~A~i~f~~~~va~d~~~ 171 (433)
T 4g4g_A 123 ISFSASIRKPSG-----AGPFPAIIGIGGAS-------------I-------------PIPSNVATITFNNDEFGAQMGS 171 (433)
T ss_dssp EEEEEEEECCSS-----SCCEEEEEEESCCC-------------S-------------CCCTTSEEEEECHHHHSCCSSG
T ss_pred EEEEEEEECCCC-----CCCccEEEEECCCc-------------c-------------ccCCCeEEEEeCCcccccccCC
Confidence 467999999975 35799999998741 0 034788887622 23
Q ss_pred CcCCCCCCCCc-----hhh--HHHHHHHHHHHHHHHHH----cCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEec
Q 005240 565 PIIGEGDKLPN-----DRF--VEQLVSSAEAAVEEVVR----RGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIAR 633 (706)
Q Consensus 565 ~~~g~g~~~~~-----~~~--~~~~~~D~~~~~~~l~~----~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~ 633 (706)
+++|+|. |.. ..+ +....-|+..+++||.+ +..||++||+|+|+|+||..|+++++.+ ++|+|+|+.
T Consensus 172 gsrG~g~-f~~ly~~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~ 249 (433)
T 4g4g_A 172 GSRGQGK-FYDLFGRDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQ 249 (433)
T ss_dssp GGTTCSH-HHHHHCTTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEE
T ss_pred CcCCccc-cccccCCccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEe
Confidence 4556553 221 112 22335689999999999 7889999999999999999999999999 799999999
Q ss_pred cCC
Q 005240 634 SGS 636 (706)
Q Consensus 634 ~~~ 636 (706)
++.
T Consensus 250 ~sg 252 (433)
T 4g4g_A 250 ESG 252 (433)
T ss_dssp SCC
T ss_pred cCC
Confidence 753
No 230
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.24 E-value=6.3e-10 Score=118.09 Aligned_cols=253 Identities=11% Similarity=0.006 Sum_probs=145.1
Q ss_pred cceeEeecCCCCCCCCeeeeecCC-CCCcccceeeCC-CCCeEEEEeeccccccccCCceeEEEEEcCCCc--------e
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYP-DGAKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE--------A 74 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~--------~ 74 (706)
..|.|.++...+.. ...+..+. ....+..+.||| |++.||.... + ..|.++++.++. .
T Consensus 57 g~i~v~~~~~~~~~--~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~--------d--g~v~vw~~~~~~~~~~~~~~~ 124 (402)
T 2aq5_A 57 GAFLVLPLGKTGRV--DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE--------D--CTVMVWEIPDGGLVLPLREPV 124 (402)
T ss_dssp CCEEEEETTCCEEC--CTTCCCBCCCSSCEEEEEECTTCTTEEEEEET--------T--SEEEEEECCTTCCSSCBCSCS
T ss_pred CEEEEEECccCCCC--CCCCceEecCCCCEEEEEeCCCCCCEEEEEeC--------C--CeEEEEEccCCCCccccCCce
Confidence 35778888552111 11222111 223588999999 8888877642 3 467777777653 2
Q ss_pred eecccCCCccccccccceEEecCCc-EEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhh
Q 005240 75 KPLFESPDICLNAVFGSFVWVNNST-LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY 153 (706)
Q Consensus 75 ~~lt~~~~~~~~~~~~~~~wSpDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 153 (706)
..+..+.. .+..+.|+|+|+ .|+..+.
T Consensus 125 ~~~~~h~~-----~v~~~~~~p~~~~~l~s~~~----------------------------------------------- 152 (402)
T 2aq5_A 125 ITLEGHTK-----RVGIVAWHPTAQNVLLSAGC----------------------------------------------- 152 (402)
T ss_dssp EEEECCSS-----CEEEEEECSSBTTEEEEEET-----------------------------------------------
T ss_pred EEecCCCC-----eEEEEEECcCCCCEEEEEcC-----------------------------------------------
Confidence 22322222 277899999994 6665432
Q ss_pred cccceEEEEcc-CCC-ceec--CCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcc-cC
Q 005240 154 YTTAQLVLGSL-DGT-AKDF--GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELC-DL 227 (706)
Q Consensus 154 ~~~~~l~~~~l-~g~-~~~l--t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~ 227 (706)
.+.|.++|+ +++ ...+ ... ..+..++|+|||+.|+..+.. ..|.+||+..++..... ..
T Consensus 153 --dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~ 217 (402)
T 2aq5_A 153 --DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-------------KRVRVIEPRKGTVVAEKDRP 217 (402)
T ss_dssp --TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-------------SEEEEEETTTTEEEEEEECS
T ss_pred --CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-------------CcEEEEeCCCCceeeeeccC
Confidence 156788888 553 3444 333 678999999999999876643 37999999866543322 22
Q ss_pred CCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC-ceEEe--ecccccccc
Q 005240 228 PPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILH--KLDLRFRSV 304 (706)
Q Consensus 228 ~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~l~--~~~~~~~~~ 304 (706)
... .....+.|+||++. |+ +..... ....|.+||+ .+++ +..+. .....+..+
T Consensus 218 ~~~-----------~~~~~~~~~~~~~~-l~-~g~~~~--------~d~~i~iwd~---~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 218 HEG-----------TRPVHAVFVSEGKI-LT-TGFSRM--------SERQVALWDT---KHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp SCS-----------SSCCEEEECSTTEE-EE-EEECTT--------CCEEEEEEET---TBCSSCSEEEECCCCSSCEEE
T ss_pred CCC-----------CcceEEEEcCCCcE-EE-EeccCC--------CCceEEEEcC---ccccCCceEEeccCCCceeEE
Confidence 110 11346799999874 43 321101 1235888888 3333 22222 345667889
Q ss_pred eecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEE
Q 005240 305 SWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVI 368 (706)
Q Consensus 305 ~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~ 368 (706)
.|+||++.|++.... ++. |.++++.+++.....+..... ......+.|+|+|..++
T Consensus 274 ~~s~~~~~l~~~g~~-dg~--i~i~d~~~~~~~~~~l~~~~~-----~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKG-DSS--IRYFEITSEAPFLHYLSMFSS-----KESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EEETTTTEEEEEETT-CSC--EEEEEECSSTTCEEEEEEECC-----SSCCSEEEECCGGGSCG
T ss_pred EEcCCCCEEEEEEcC-CCe--EEEEEecCCCcceEeeccccc-----CCcccceEEecccccce
Confidence 999999988765422 233 555555553211223321110 01123477899988754
No 231
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.24 E-value=2.3e-09 Score=115.28 Aligned_cols=125 Identities=7% Similarity=0.099 Sum_probs=71.1
Q ss_pred ceEeeeeeCCCC-cEEEEEeeccCcccccccccccceEEEEecCCCee-----EEcccCCCCCCCCcccCccCCCCccee
Q 005240 175 AVYTAVEPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-----RELCDLPPAEDIPVCYNSVREGMRSIS 248 (706)
Q Consensus 175 ~~~~~~~~SpDG-~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~l~~~~~~~~~p~~~~~~~~g~~~~~ 248 (706)
..+..++|+|+| +.|+..+.. ..|.+||+..++. +.+........... +......+..+.
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~ 292 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSSSK-------------GTIRLCDMRASALCDRHSKLFEEPEDPSNRSF-FSEIISSISDVK 292 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEETT-------------SCEEEEETTTCSSSCTTCEEECCC-----CCH-HHHHTTCEEEEE
T ss_pred cceEEEEECCCCCcEEEEEeCC-------------CeEEEEECcCCccccceeeEeccCCCcccccc-ccccCceEEEEE
Confidence 578899999999 777655543 3799999986553 33332211000000 000001245789
Q ss_pred eecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCC-CC-ceEEeecccc---------------cccceecCCCc
Q 005240 249 WRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG-EK-PEILHKLDLR---------------FRSVSWCDDSL 311 (706)
Q Consensus 249 ~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~-~~~l~~~~~~---------------~~~~~wspDg~ 311 (706)
|+|||+. |+... . ..|.+||+ .. ++ ...+...... ...+.|+|||+
T Consensus 293 ~s~~g~~-l~~~~------------~-~~v~iwd~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~ 355 (447)
T 3dw8_B 293 FSHSGRY-MMTRD------------Y-LSVKVWDL---NMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS 355 (447)
T ss_dssp ECTTSSE-EEEEE------------S-SEEEEEET---TCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS
T ss_pred ECCCCCE-EEEee------------C-CeEEEEeC---CCCccccceeeccccccccccccccccccccceEEEECCCCC
Confidence 9999986 54321 1 24788888 32 33 3334333221 12389999999
Q ss_pred eEEEEeeccccceEEEEEcCCCC
Q 005240 312 ALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
.|+..+. ...|+++|+.++
T Consensus 356 ~l~s~s~----dg~v~iwd~~~~ 374 (447)
T 3dw8_B 356 VVMTGSY----NNFFRMFDRNTK 374 (447)
T ss_dssp EEEEECS----TTEEEEEETTTC
T ss_pred EEEEecc----CCEEEEEEcCCC
Confidence 9876542 235777787774
No 232
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.24 E-value=3.1e-09 Score=113.49 Aligned_cols=252 Identities=12% Similarity=0.079 Sum_probs=154.6
Q ss_pred cceeEeecCCCCCCCCeeeeecCCC-CCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
..|+|+|+.. |+..++-.+.. ...+..++|||||++||.... + ..|.++++++++..+......
T Consensus 125 ~tV~lWd~~t----g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~--------D--g~v~iWd~~~~~~~~~~~~h~- 189 (420)
T 4gga_A 125 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS--------S--AEVQLWDVQQQKRLRNMTSHS- 189 (420)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEET--------T--SCEEEEETTTTEEEEEECCCS-
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC--------C--CeEEEEEcCCCcEEEEEeCCC-
Confidence 4689999988 88776654433 336899999999999987643 3 467777888877554432221
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
.....+++|++.|+..+.. ..++.++
T Consensus 190 -----~~v~~~s~~~~~l~sgs~d-------------------------------------------------~~i~~~d 215 (420)
T 4gga_A 190 -----ARVGSLSWNSYILSSGSRS-------------------------------------------------GHIHHHD 215 (420)
T ss_dssp -----SCEEEEEEETTEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred -----CceEEEeeCCCEEEEEeCC-------------------------------------------------CceeEee
Confidence 1223455577777765421 4566666
Q ss_pred cCC---CceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeE--EcccCCCCCCCCccc
Q 005240 164 LDG---TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR--ELCDLPPAEDIPVCY 237 (706)
Q Consensus 164 l~g---~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~l~~~~~~~~~p~~~ 237 (706)
... ....+... ..+..+.|+|+|+.|+....+ ..+.+|+...++.. .+......
T Consensus 216 ~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D-------------~~v~i~~~~~~~~~~~~~~~~~~~------- 275 (420)
T 4gga_A 216 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------NLVNVWPSAPGEGGWVPLQTFTQH------- 275 (420)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESSCCSSCSCCSEEECCC-------
T ss_pred ecccceeeEEecccccceeeeeecCCCCeeeeeecc-------------ccceEEeeccccccceeeeeeccc-------
Confidence 632 22333333 577889999999999866544 36888988754311 11111000
Q ss_pred CccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEe
Q 005240 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 317 (706)
Q Consensus 238 ~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~ 317 (706)
...+..+.|+|++.. ++.+.. +.. ...|.+||+ .+++..........+....|+|+++.++..+
T Consensus 276 ---~~~V~~~~~~p~~~~-~la~~~--gs~-------D~~I~iwd~---~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 276 ---QGAVKAVAWCPWQSN-VLATGG--GTS-------DRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGH 339 (420)
T ss_dssp ---SSCEEEEEECTTCTT-EEEEEE--CTT-------TCEEEEEET---TTTEEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred ---CCceeeeeeCCCccc-EEEEEe--ecC-------CCEEEEEeC---CccccceeeccccceeeeeecCCCCeEEEEE
Confidence 022457899999988 443321 111 124888888 5665555555566778889999999998765
Q ss_pred eccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 318 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 318 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
...+ ..|.++|+.++ ++...+...-.. ...++|+|||++|+...
T Consensus 340 g~~d--~~I~iwd~~~~--~~v~~l~gH~~~------V~~l~~spdg~~l~S~s 383 (420)
T 4gga_A 340 GFAQ--NQLVIWKYPTM--AKVAELKGHTSR------VLSLTMSPDGATVASAA 383 (420)
T ss_dssp CTTT--CCEEEEETTTC--CEEEEECCCSSC------EEEEEECTTSSCEEEEE
T ss_pred ecCC--CEEEEEECCCC--cEEEEEcCCCCC------EEEEEEcCCCCEEEEEe
Confidence 3332 34666777764 333323322111 23478999999887654
No 233
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.23 E-value=1e-09 Score=113.91 Aligned_cols=215 Identities=8% Similarity=0.013 Sum_probs=130.6
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCC---CCeEEEEeeccccccccCCceeEEEEEcCCCc-e-eeccc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAETGE-A-KPLFE 79 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPD---G~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~-~-~~lt~ 79 (706)
..|.|+++.. ++...+........+..+.|+|+ |+.|+.... ...|.++++.+++ . ..+..
T Consensus 44 ~~v~iw~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~ 109 (357)
T 3i2n_A 44 GVIQLYEIQH----GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF----------GGNLHIWNLEAPEMPVYSVKG 109 (357)
T ss_dssp EEEEEEEECS----SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET----------TSCEEEECTTSCSSCSEEECC
T ss_pred cEEEEEeCCC----CcccceeeecccCcEEEEEEcCCCCCCceEEEecC----------CCeEEEEeCCCCCccEEEEEe
Confidence 4688999977 76665543334446889999999 688877542 3567778888765 3 33332
Q ss_pred CCCccccccccce------EEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhh
Q 005240 80 SPDICLNAVFGSF------VWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDY 153 (706)
Q Consensus 80 ~~~~~~~~~~~~~------~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 153 (706)
+.. .+..+ .|+||++.|+..+.+
T Consensus 110 ~~~-----~v~~~~~~~~~~~s~~~~~l~~~~~d---------------------------------------------- 138 (357)
T 3i2n_A 110 HKE-----IINAIDGIGGLGIGEGAPEIVTGSRD---------------------------------------------- 138 (357)
T ss_dssp CSS-----CEEEEEEESGGGCC-CCCEEEEEETT----------------------------------------------
T ss_pred ccc-----ceEEEeeccccccCCCccEEEEEeCC----------------------------------------------
Confidence 222 24555 467899988876421
Q ss_pred cccceEEEEcc-CCC--ceecCCC-----ceEeeee----eCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee
Q 005240 154 YTTAQLVLGSL-DGT--AKDFGTP-----AVYTAVE----PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV 221 (706)
Q Consensus 154 ~~~~~l~~~~l-~g~--~~~lt~~-----~~~~~~~----~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 221 (706)
+.|.++++ +++ ...+... ..+..+. |+|+++.|+..... ..|.+|++.+++.
T Consensus 139 ---~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 139 ---GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-------------GDIKLFDLRNMAL 202 (357)
T ss_dssp ---SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-------------SEEEEEETTTTEE
T ss_pred ---CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-------------CeEEEEECccCce
Confidence 46777787 332 3333221 2445555 89999999876543 3799999998776
Q ss_pred EEcccCCCCCCCCcccCccCCCCcceeeec---CCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC-ceEEe--
Q 005240 222 RELCDLPPAEDIPVCYNSVREGMRSISWRA---DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILH-- 295 (706)
Q Consensus 222 ~~l~~~~~~~~~p~~~~~~~~g~~~~~~sp---dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~l~-- 295 (706)
....... ..+..+.|+| ++.. |+... . .+.|.++|+ ..++ ...+.
T Consensus 203 ~~~~~~~-------------~~v~~~~~~~~~~~~~~-l~~~~-~-----------dg~i~i~d~---~~~~~~~~~~~~ 253 (357)
T 3i2n_A 203 RWETNIK-------------NGVCSLEFDRKDISMNK-LVATS-L-----------EGKFHVFDM---RTQHPTKGFASV 253 (357)
T ss_dssp EEEEECS-------------SCEEEEEESCSSSSCCE-EEEEE-S-----------TTEEEEEEE---EEEETTTEEEEE
T ss_pred eeecCCC-------------CceEEEEcCCCCCCCCE-EEEEC-C-----------CCeEEEEeC---cCCCcccceeee
Confidence 5543332 2244789999 8875 54331 1 124777777 3332 22222
Q ss_pred ---ecccccccceecCCCceEEEEeeccccceEEEEEc
Q 005240 296 ---KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (706)
Q Consensus 296 ---~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d 330 (706)
.....+..+.|+|++..+++....+ +..+||.+.
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~iwd~~ 290 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAGGA-GGLHLWKYE 290 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETT-SEEEEEEEE
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEeCC-CcEEEeecC
Confidence 4567788999999998444433232 444555554
No 234
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.23 E-value=1.7e-10 Score=113.05 Aligned_cols=108 Identities=15% Similarity=0.099 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCC------------CCCcc-----
Q 005240 583 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT------------LTPFG----- 645 (706)
Q Consensus 583 ~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~------------~~~~~----- 645 (706)
+..+...++...+. -+|++||+++|+|+||+|++.++.++|+.|+++++++|..... .+|..
T Consensus 114 ~~~i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~~~~~~~~~~~~Pvl~~HG~ 192 (246)
T 4f21_A 114 IAKVNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNFKGKITSINKGLPILVCHGT 192 (246)
T ss_dssp HHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHHSTTCCGGGTTCCEEEEEET
T ss_pred HHHHHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccccccccccccccCCchhhcccC
Confidence 33334444433333 4899999999999999999999999999999999999864211 11211
Q ss_pred -------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 646 -------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 646 -------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
-..+++++.|++.|.++++..|||.+|.+. .+.++.+.+||++.|+
T Consensus 193 ~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~-----~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 193 DDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC-----MEEIKDISNFIAKTFK 245 (246)
T ss_dssp TCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC-----HHHHHHHHHHHHHHTT
T ss_pred CCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC-----HHHHHHHHHHHHHHhC
Confidence 123488999999999999999999999876 3567889999999885
No 235
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.22 E-value=3e-10 Score=122.55 Aligned_cols=122 Identities=10% Similarity=-0.004 Sum_probs=87.2
Q ss_pred eEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEc
Q 005240 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (706)
Q Consensus 482 ~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (706)
...+.+.+.||..+..... . . .|+||++||.+.. ...+ ...+..|++.||.|+..
T Consensus 3 ~i~~~~~~~dG~~l~y~~~-G------~---gp~VV~lHG~~~~-----------~~~~----~~l~~~La~~Gy~Vi~~ 57 (456)
T 3vdx_A 3 FITVGQENSTSIDLYYEDH-G------T---GVPVVLIHGFPLS-----------GHSW----ERQSAALLDAGYRVITY 57 (456)
T ss_dssp EEEEEEETTEEEEEEEEEE-S------S---SEEEEEECCTTCC-----------GGGG----TTHHHHHHHHTEEEEEE
T ss_pred eEeecccccCCeEEEEEEe-C------C---CCEEEEECCCCCc-----------HHHH----HHHHHHHHHCCcEEEEE
Confidence 3456666778877774433 1 1 3789999997521 1112 13567788899999997
Q ss_pred CCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC-CCceeEEEeccCCC
Q 005240 562 PSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSY 637 (706)
Q Consensus 562 ~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~ 637 (706)
+.+ |+|.+... ........+|+.++++++ +.+++.++|||+||++++.++.++ |++++++++.++..
T Consensus 58 D~r---G~G~S~~~~~~~s~~~~a~dl~~~l~~l------~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~ 127 (456)
T 3vdx_A 58 DRR---GFGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLE 127 (456)
T ss_dssp CCT---TSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCC
T ss_pred CCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcc
Confidence 766 45544332 234566788888888876 446899999999999998888877 89999999999865
No 236
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.20 E-value=6.4e-11 Score=109.71 Aligned_cols=152 Identities=11% Similarity=0.061 Sum_probs=98.3
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 592 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~ 592 (706)
.|+||++||.+.. ...+ ....+...|+++||.|+.++.++ +|.+.... ......+++..++++
T Consensus 4 ~~~vv~~HG~~~~-----------~~~~--~~~~~~~~l~~~g~~v~~~d~~g---~g~s~~~~-~~~~~~~~~~~~~~~ 66 (176)
T 2qjw_A 4 RGHCILAHGFESG-----------PDAL--KVTALAEVAERLGWTHERPDFTD---LDARRDLG-QLGDVRGRLQRLLEI 66 (176)
T ss_dssp SCEEEEECCTTCC-----------TTSH--HHHHHHHHHHHTTCEEECCCCHH---HHTCGGGC-TTCCHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCC-----------ccHH--HHHHHHHHHHHCCCEEEEeCCCC---CCCCCCCC-CCCCHHHHHHHHHHH
Confidence 5899999996311 0111 01145667888999999977653 44332111 111223444555666
Q ss_pred HHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC--------CCcc---------c---hHHHHH
Q 005240 593 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL--------TPFG---------F---QAERFF 652 (706)
Q Consensus 593 l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~--------~~~~---------~---~~~~~~ 652 (706)
+.+.. +.++++++|+|+||++++.++.++| ++++++.+|..+... .|.. . ...+++
T Consensus 67 ~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 142 (176)
T 2qjw_A 67 ARAAT--EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLPALDAAAVPISIVHAWHDELIPAADVIAWA 142 (176)
T ss_dssp HHHHH--TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBCCCCCCSSCEEEEEETTCSSSCHHHHHHHH
T ss_pred HHhcC--CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccccCcccccCCCEEEEEcCCCCccCHHHHHHHH
Confidence 66553 4579999999999999999999997 999999998765221 1211 1 122555
Q ss_pred HHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 005240 653 DALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 693 (706)
Q Consensus 653 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~ 693 (706)
+.+ +.+++++ +++|.+. ....++.+.+.+||++
T Consensus 143 ~~~-----~~~~~~~-~~~H~~~--~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 143 QAR-----SARLLLV-DDGHRLG--AHVQAASRAFAELLQS 175 (176)
T ss_dssp HHH-----TCEEEEE-SSCTTCT--TCHHHHHHHHHHHHHT
T ss_pred HhC-----CceEEEe-CCCcccc--ccHHHHHHHHHHHHHh
Confidence 554 5688888 8999984 4567778888888764
No 237
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.19 E-value=5.3e-09 Score=109.18 Aligned_cols=217 Identities=15% Similarity=0.201 Sum_probs=133.1
Q ss_pred cceeEeecCCCCCCCCeeeeecCC-CCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYP-DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
..|.|+++.. ++.+.+..+. ....+..+.|+|||+.|+.... + ..|.++++++++..+.......
T Consensus 30 ~~v~i~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--------d--g~i~vwd~~~~~~~~~~~~~~~ 95 (372)
T 1k8k_C 30 HEVHIYEKSG----NKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT--------D--RNAYVWTLKGRTWKPTLVILRI 95 (372)
T ss_dssp SEEEEEEEET----TEEEEEEEEECCSSCEEEEEEETTTTEEEEEET--------T--SCEEEEEEETTEEEEEEECCCC
T ss_pred CEEEEEeCCC----CcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC--------C--CeEEEEECCCCeeeeeEEeecC
Confidence 4688899876 6422332222 2235889999999999987642 3 4566667777763332211111
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
...+..+.|+|||++|+..... +.|.+++
T Consensus 96 --~~~v~~~~~~~~~~~l~~~~~d-------------------------------------------------~~v~i~d 124 (372)
T 1k8k_C 96 --NRAARCVRWAPNEKKFAVGSGS-------------------------------------------------RVISICY 124 (372)
T ss_dssp --SSCEEEEEECTTSSEEEEEETT-------------------------------------------------SSEEEEE
T ss_pred --CCceeEEEECCCCCEEEEEeCC-------------------------------------------------CEEEEEE
Confidence 1137789999999998876421 3455556
Q ss_pred c-CCC----ceecCCC--ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC-------------------
Q 005240 164 L-DGT----AKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD------------------- 217 (706)
Q Consensus 164 l-~g~----~~~lt~~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~------------------- 217 (706)
+ .++ ...+... ..+..++|+|||++|+..+.. ..+.+|++.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (372)
T 1k8k_C 125 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-------------FKCRIFSAYIKEVEERPAPTPWGSKMPF 191 (372)
T ss_dssp EETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT-------------SCEEEEECCCTTTSCCCCCBTTBSCCCT
T ss_pred ecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC-------------CCEEEEEcccccccccccccccccccch
Confidence 6 232 2333222 678899999999998866543 378899964
Q ss_pred CCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEee
Q 005240 218 GKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHK 296 (706)
Q Consensus 218 ~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~ 296 (706)
+.....+.... ..+..+.|+||++. |+... . .+.|.++|+ ..++. ..+..
T Consensus 192 ~~~~~~~~~~~-------------~~v~~~~~~~~~~~-l~~~~-~-----------d~~i~i~d~---~~~~~~~~~~~ 242 (372)
T 1k8k_C 192 GELMFESSSSC-------------GWVHGVCFSANGSR-VAWVS-H-----------DSTVCLADA---DKKMAVATLAS 242 (372)
T ss_dssp TCEEEECCCCS-------------SCEEEEEECSSSSE-EEEEE-T-----------TTEEEEEEG---GGTTEEEEEEC
T ss_pred hhheEecCCCC-------------CeEEEEEECCCCCE-EEEEe-C-----------CCEEEEEEC---CCCceeEEEcc
Confidence 22222222111 12447899999986 55332 1 124788888 44443 34445
Q ss_pred cccccccceecCCCceEEEEeeccccceEEEEEcC
Q 005240 297 LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (706)
Q Consensus 297 ~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (706)
....+..+.|+||++.|+.. .++...+|.++.
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~---~d~~i~i~~~~~ 274 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAG---HDCFPVLFTYDS 274 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEE---TTSSCEEEEEET
T ss_pred CCCCeEEEEEecCCCEEEEE---eCCeEEEEEccC
Confidence 56678899999999977654 234556666654
No 238
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.19 E-value=4.7e-09 Score=106.67 Aligned_cols=214 Identities=12% Similarity=0.113 Sum_probs=132.6
Q ss_pred ceeEeecCCCCCCCCe-eeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecc-cCCCc
Q 005240 6 GIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF-ESPDI 83 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt-~~~~~ 83 (706)
.|.|.++.. ++. +.+.. ....+...+|+|||++|+..+. ...|.++|+.+++..... .+..
T Consensus 36 ~v~lWd~~~----~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~----------d~~i~vwd~~~~~~~~~~~~h~~- 98 (304)
T 2ynn_A 36 RVELWNYET----QVEVRSIQV--TETPVRAGKFIARKNWIIVGSD----------DFRIRVFNYNTGEKVVDFEAHPD- 98 (304)
T ss_dssp EEEEEETTT----TEEEEEEEC--CSSCEEEEEEEGGGTEEEEEET----------TSEEEEEETTTCCEEEEEECCSS-
T ss_pred cEEEEECCC----CceeEEeec--cCCcEEEEEEeCCCCEEEEECC----------CCEEEEEECCCCcEEEEEeCCCC-
Confidence 578888866 543 23332 2224778999999999987642 357788898888755433 2222
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
.+..+.|+|++++|+..+.+ +.|.++|
T Consensus 99 ----~v~~~~~~~~~~~l~sgs~D-------------------------------------------------~~v~lWd 125 (304)
T 2ynn_A 99 ----YIRSIAVHPTKPYVLSGSDD-------------------------------------------------LTVKLWN 125 (304)
T ss_dssp ----CEEEEEECSSSSEEEEEETT-------------------------------------------------SCEEEEE
T ss_pred ----cEEEEEEcCCCCEEEEECCC-------------------------------------------------CeEEEEE
Confidence 27789999999988866421 4567777
Q ss_pred c-CC-Ccee-cCCC-ceEeeeeeCC-CCcEEEEEeeccCcccccccccccceEEEEecCCCe-eEEcccCCCCCCCCccc
Q 005240 164 L-DG-TAKD-FGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCY 237 (706)
Q Consensus 164 l-~g-~~~~-lt~~-~~~~~~~~Sp-DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~~p~~~ 237 (706)
+ ++ .... +... ..+..++|+| |++.|+..+.+ ..|.+||+.... ...+.....
T Consensus 126 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D-------------~~v~iwd~~~~~~~~~~~~~~~-------- 184 (304)
T 2ynn_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-------------RTVKVWSLGQSTPNFTLTTGQE-------- 184 (304)
T ss_dssp GGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT-------------SEEEEEETTCSSCSEEEECCCT--------
T ss_pred CCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC-------------CeEEEEECCCCCccceeccCCc--------
Confidence 7 34 3333 3333 6788999999 56677654433 379999997443 222222110
Q ss_pred CccCCCCcceeeec--CCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC-ceEEeecccccccceecCCCceEE
Q 005240 238 NSVREGMRSISWRA--DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALV 314 (706)
Q Consensus 238 ~~~~~g~~~~~~sp--dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~wspDg~~l~ 314 (706)
.+...+.|+| +++. |+ .... ...|.+||+ .+++ ...+..+...+..+.|+|++..|+
T Consensus 185 ----~~v~~~~~~~~~~~~~-l~-s~s~-----------D~~i~iWd~---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 185 ----RGVNYVDYYPLPDKPY-MI-TASD-----------DLTIKIWDY---QTKSCVATLEGHMSNVSFAVFHPTLPIII 244 (304)
T ss_dssp ----TCEEEEEECCSTTCCE-EE-EEET-----------TSEEEEEET---TTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred ----CcEEEEEEEEcCCCCE-EE-EEcC-----------CCeEEEEeC---CCCccceeeCCCCCCEEEEEECCCCCEEE
Confidence 1233456766 5543 33 2211 125888888 4443 344556677788899999999888
Q ss_pred EEeeccccceEEEEEcCCCC
Q 005240 315 NETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 315 ~~~~~~~~~~~l~~~d~~~~ 334 (706)
..+.+ +. |.++|+.+.
T Consensus 245 s~s~D--g~--i~iWd~~~~ 260 (304)
T 2ynn_A 245 SGSED--GT--LKIWNSSTY 260 (304)
T ss_dssp EEETT--SC--EEEEETTTC
T ss_pred EEcCC--Ce--EEEEECCCC
Confidence 76522 33 556677663
No 239
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.18 E-value=2.7e-10 Score=119.60 Aligned_cols=216 Identities=10% Similarity=0.145 Sum_probs=125.8
Q ss_pred cceeEeecCCCCCCCCeeeeecCCC-CCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCc----eeeccc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFE 79 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~----~~~lt~ 79 (706)
..|.|+++.. +..+.+..+.. ...+..++|||||++|+.... + ..|.++|+.+++ ...+..
T Consensus 33 ~~i~iw~~~~----~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~--------d--~~v~vwd~~~~~~~~~~~~~~~ 98 (377)
T 3dwl_C 33 NQVELYEQDG----NGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ--------D--RNAYVYEKRPDGTWKQTLVLLR 98 (377)
T ss_dssp SCBCEEEEET----TEEEECCCBCCCSSCEEEEEECTTTCCEEEEET--------T--SSEEEC------CCCCEEECCC
T ss_pred CEEEEEEccC----CceEEEEEEecCCceEEEEEEeCCCCEEEEEeC--------C--CeEEEEEcCCCCceeeeeEecc
Confidence 4578888866 53334433332 236889999999999988653 3 456777777765 333332
Q ss_pred CCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceE
Q 005240 80 SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (706)
Q Consensus 80 ~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 159 (706)
+.. .+..+.|+|||++|+..+.+ +.|
T Consensus 99 ~~~-----~v~~~~~~~~~~~l~~~~~d-------------------------------------------------~~i 124 (377)
T 3dwl_C 99 LNR-----AATFVRWSPNEDKFAVGSGA-------------------------------------------------RVI 124 (377)
T ss_dssp CSS-----CEEEEECCTTSSCCEEEESS-------------------------------------------------SCE
T ss_pred cCC-----ceEEEEECCCCCEEEEEecC-------------------------------------------------CeE
Confidence 222 37789999999988876421 456
Q ss_pred EEEccC-CC----ceecCC-C-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccC-CCCC
Q 005240 160 VLGSLD-GT----AKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL-PPAE 231 (706)
Q Consensus 160 ~~~~l~-g~----~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~~~ 231 (706)
.++++. ++ .+.+.. . ..+..++|+|||++|+..+.+ ..|.+|++.......-... ....
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~ 191 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD-------------RKAYVLSAYVRDVDAKPEASVWGS 191 (377)
T ss_dssp EECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS-------------SCEEEEEECCSSCC-CCCSCSSCS
T ss_pred EEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC-------------CEEEEEEEEecccCCCcccccccc
Confidence 677773 33 455554 3 678899999999999876654 3688999863221100000 0000
Q ss_pred CCC----cccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC-----ceEEeecccccc
Q 005240 232 DIP----VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-----PEILHKLDLRFR 302 (706)
Q Consensus 232 ~~p----~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-----~~~l~~~~~~~~ 302 (706)
..+ .........+..+.|+|||+. |+... . .+.|.+||+ .+++ ...+......+.
T Consensus 192 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~~~~-~-----------d~~i~iwd~---~~~~~~~~~~~~~~~~~~~v~ 255 (377)
T 3dwl_C 192 RLPFNTVCAEYPSGGWVHAVGFSPSGNA-LAYAG-H-----------DSSVTIAYP---SAPEQPPRALITVKLSQLPLR 255 (377)
T ss_dssp CCCEEEEEECCCCSSSEEEEEECTTSSC-EEEEE-T-----------TTEEC-CEE---CSTTSCEEECCCEECSSSCEE
T ss_pred ccchhhhhhcccCCceEEEEEECCCCCE-EEEEe-C-----------CCcEEEEEC---CCCCCcceeeEeecCCCCceE
Confidence 000 000000122457899999997 65432 1 124778888 4444 344556677788
Q ss_pred cceecCCCceEEEEe
Q 005240 303 SVSWCDDSLALVNET 317 (706)
Q Consensus 303 ~~~wspDg~~l~~~~ 317 (706)
.+.|+|||+.|+..+
T Consensus 256 ~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 256 SLLWANESAIVAAGY 270 (377)
T ss_dssp EEEEEETTEEEEEES
T ss_pred EEEEcCCCCEEEEEc
Confidence 999999999887653
No 240
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.17 E-value=1.6e-08 Score=102.86 Aligned_cols=278 Identities=12% Similarity=0.119 Sum_probs=156.1
Q ss_pred cceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCC
Q 005240 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (706)
Q Consensus 34 ~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~ 113 (706)
.-+.|||++ .||... + ..|.++|+++|+..++.....+ ...+..+.|+|||++|+..+.+
T Consensus 29 ~~l~WS~~~-~lAvg~---------D--~tV~iWd~~tg~~~~~~~~~~~--~~~V~~v~~~~~~~~l~sgs~D------ 88 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVAL---------D--NSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEGNYLAVGTSS------ 88 (318)
T ss_dssp BCEEECTTS-EEEEEE---------T--TEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTSSEEEEEETT------
T ss_pred eEEEECCCC-EEEEEe---------C--CEEEEEECCCCCEEEEEEecCC--CCeEEEEEECCCCCEEEEEECC------
Confidence 457999987 676643 2 4688899999987765432221 1126789999999998876421
Q ss_pred CCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc-eecCCCceEeeeeeCCCCcEEEE
Q 005240 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTPAVYTAVEPSPDQKYVLI 191 (706)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~-~~lt~~~~~~~~~~SpDG~~i~~ 191 (706)
+.|.++++ +++. +.+... ......++++++.|+.
T Consensus 89 -------------------------------------------g~v~iw~~~~~~~~~~~~~h-~~~~~~~~~~~~~l~s 124 (318)
T 4ggc_A 89 -------------------------------------------AEVQLWDVQQQKRLRNMTSH-SARVGSLSWNSYILSS 124 (318)
T ss_dssp -------------------------------------------SEEEEEETTTTEEEEEEECC-SSCEEEEEEETTEEEE
T ss_pred -------------------------------------------CcEEEeecCCceeEEEecCc-cceEEEeecCCCEEEE
Confidence 56777788 5533 333332 1223346677777765
Q ss_pred EeeccCcccccccccccceEEEEecCCCe--eEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCc
Q 005240 192 TSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDAN 269 (706)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~ 269 (706)
.+.. ..+.+++..... ...+.... .....+.|+++++. |+.. ..+
T Consensus 125 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~-l~s~-~~d----- 171 (318)
T 4ggc_A 125 GSRS-------------GHIHHHDVRVAEHHVATLSGHS-------------QEVCGLRWAPDGRH-LASG-GND----- 171 (318)
T ss_dssp EETT-------------SEEEEEETTSSSCEEEEEECCS-------------SCEEEEEECTTSSE-EEEE-ETT-----
T ss_pred EecC-------------CceEeeecCCCceeEEEEcCcc-------------CceEEEEEcCCCCE-EEEE-ecC-----
Confidence 4433 256666665332 22222221 11336688899885 4422 111
Q ss_pred cccCccceeeeecCCCCCCCCc-----eEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecC
Q 005240 270 VEVSPRDIIYTQPAEPAEGEKP-----EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDR 344 (706)
Q Consensus 270 ~~~~~~~~l~~~d~~~~~~~~~-----~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~ 344 (706)
..|.+||+ .+++. .........+..+.|+|++..++...... ....|.+.|..... .......
T Consensus 172 ------~~i~iwd~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~i~lwd~~~~~--~~~~~~~ 239 (318)
T 4ggc_A 172 ------NLVNVWPS---APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT-SDRHIRIWNVCSGA--CLSAVDA 239 (318)
T ss_dssp ------SCEEEEES---SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT-TTCEEEEEETTTCC--EEEEEEC
T ss_pred ------cceeEEEC---CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC-CCCEEEEEeccccc--ccccccc
Confidence 24777887 43332 12223455677888999987666543222 23345566666532 1221111
Q ss_pred cccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhh
Q 005240 345 VFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVA 424 (706)
Q Consensus 345 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 424 (706)
. .......++++++.++..... ....+..+|+.+++....+....
T Consensus 240 ~-------~~v~~~~~~~~~~~~~~~sg~-------------------~d~~i~iwd~~~~~~~~~l~gH~--------- 284 (318)
T 4ggc_A 240 H-------SQVCSILWSPHYKELISGHGF-------------------AQNQLVIWKYPTMAKVAELKGHT--------- 284 (318)
T ss_dssp S-------SCEEEEEEETTTTEEEEEECT-------------------TTCCEEEEETTTCCEEEEECCCS---------
T ss_pred e-------eeeeeeeecccccceEEEEEc-------------------CCCEEEEEECCCCcEEEEEcCCC---------
Confidence 1 011235678888887765411 11246677888776544433221
Q ss_pred hccCCCceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 005240 425 LVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (706)
Q Consensus 425 ~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~ 461 (706)
.....++|||||+.|+....+ ..|.+||+..
T Consensus 285 --~~V~~l~~spdg~~l~S~s~D----~~v~iWd~~~ 315 (318)
T 4ggc_A 285 --SRVLSLTMSPDGATVASAAAD----ETLRLWRCFE 315 (318)
T ss_dssp --SCEEEEEECTTSSCEEEEETT----TEEEEECCSC
T ss_pred --CCEEEEEEcCCCCEEEEEecC----CeEEEEECCC
Confidence 222357899999877654433 3488888754
No 241
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.17 E-value=1.2e-09 Score=110.76 Aligned_cols=113 Identities=10% Similarity=0.078 Sum_probs=79.9
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (706)
+|..+.....-+ -|+||++||.+.. ...+ ...+..|++.||.|+..+.+ |+|
T Consensus 17 ~g~~l~~~~~g~----------~~~vv~~HG~~~~-----------~~~~----~~~~~~l~~~g~~v~~~d~~---G~G 68 (309)
T 3u1t_A 17 EGATIAYVDEGS----------GQPVLFLHGNPTS-----------SYLW----RNIIPYVVAAGYRAVAPDLI---GMG 68 (309)
T ss_dssp TTEEEEEEEEEC----------SSEEEEECCTTCC-----------GGGG----TTTHHHHHHTTCEEEEECCT---TST
T ss_pred CCeEEEEEEcCC----------CCEEEEECCCcch-----------hhhH----HHHHHHHHhCCCEEEEEccC---CCC
Confidence 777777655422 2678999997421 1112 13456678899999996665 455
Q ss_pred CCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 571 DKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 571 ~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
.+... ........+|+.++++.+ +.+++.++|||+||++++.++.++|++++++|+.++..
T Consensus 69 ~S~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (309)
T 3u1t_A 69 DSAKPDIEYRLQDHVAYMDGFIDAL------GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALV 131 (309)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHHHH------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESC
T ss_pred CCCCCCcccCHHHHHHHHHHHHHHc------CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCC
Confidence 44332 234556677777776665 33689999999999999999999999999999998653
No 242
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.16 E-value=2.5e-08 Score=103.97 Aligned_cols=92 Identities=16% Similarity=0.057 Sum_probs=53.8
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceee-cccCCCcc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPDIC 84 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-lt~~~~~~ 84 (706)
.|++.|... ++.. ..++.+... .+++||||++|+.+.........+.....|.++|+++++... +.-.+...
T Consensus 32 ~v~v~D~~t----~~~~--~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~ 104 (361)
T 2oiz_A 32 RVHVYDYTN----GKFL--GMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV 104 (361)
T ss_dssp EEEEEETTT----CCEE--EEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC
T ss_pred eEEEEECCC----CeEE--EEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc
Confidence 567777655 6543 334555445 899999999996654211000111223568899998876543 32111100
Q ss_pred -ccccccceEEecCCcEEEEE
Q 005240 85 -LNAVFGSFVWVNNSTLLIFT 104 (706)
Q Consensus 85 -~~~~~~~~~wSpDg~~l~~~ 104 (706)
.......+.+||||++||..
T Consensus 105 ~~g~~p~~i~~spdg~~l~v~ 125 (361)
T 2oiz_A 105 QGLNYDGLFRQTTDGKFIVLQ 125 (361)
T ss_dssp CBCCCGGGEEECTTSSEEEEE
T ss_pred ccCCCcceEEECCCCCEEEEE
Confidence 01125688999999998876
No 243
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.16 E-value=7.9e-09 Score=108.01 Aligned_cols=291 Identities=9% Similarity=-0.066 Sum_probs=139.2
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCC--Cc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP--DI 83 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~--~~ 83 (706)
.|++.|++. ++. +..++.+... .+.+||||++|+.+........++.....|.++|+++.+...-...+ ..
T Consensus 48 ~v~v~D~~t----~~~--~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~ 120 (373)
T 2mad_H 48 QQWVLDAGS----GSI--LGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR 120 (373)
T ss_pred EEEEEECCC----CeE--EEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc
Confidence 567777765 554 3446666545 99999999999776532111111122456889999876654321111 00
Q ss_pred cc-cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceee-cCCCcccccccchhccCCchhh--hhhhhcccceE
Q 005240 84 CL-NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQS-NEQKNIIISRMTDNLLKDEYDE--SLFDYYTTAQL 159 (706)
Q Consensus 84 ~~-~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~l 159 (706)
.. ......+.|||||++|++............ . ..+..+.. ...+..+. ...++ ........+.+
T Consensus 121 ~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~vi-D-~t~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~dg~~ 189 (373)
T 2mad_H 121 FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLV-V-QGGSSDDQLLSSPTCYH---------IHPGAPSTFYLLCAQGGL 189 (373)
T ss_pred cccCCCccceEECCCCCEEEEEecCCCCeEEEE-E-CCCCEEeEEcCCCceEE---------EEeCCCceEEEEcCCCCE
Confidence 00 011457899999999988642211111000 0 11111111 10000000 00000 00000011333
Q ss_pred EEEccCCCce-ecC-----CC--ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCC
Q 005240 160 VLGSLDGTAK-DFG-----TP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE 231 (706)
Q Consensus 160 ~~~~l~g~~~-~lt-----~~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~ 231 (706)
..++++|+.. ... .. .....+.+++++..++|.+.. ..++++|+.+...+.+.......
T Consensus 190 ~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------------~~v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 190 AKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYS-------------GKILQADISAAGATNKAPIDALS 256 (373)
T ss_pred EEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCC-------------ceEEEEeccCCcceEeeeeeecC
Confidence 4444433221 110 00 111234566666666665532 36888888765433322211100
Q ss_pred CCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCc
Q 005240 232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSL 311 (706)
Q Consensus 232 ~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~ 311 (706)
.........+.+...+.++||++. ||.... ... ........+.|+++|+ ++++...-.........+.|+|||+
T Consensus 257 ~~~~~~~~~p~g~~~~~~s~d~~~-lyV~~~-~~~-~~~~~~~~~~V~VID~---~t~~vv~~i~~g~~p~~i~~s~Dg~ 330 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAYLKSSDG-IYLLTS-EQS-AWKLHAAAKEVTSVTG---LVGQTSSQISLGHDVDAISVAQDGG 330 (373)
T ss_pred CcccccceecCceEeEEECCCCCE-EEEEec-cCC-cccccCCCCeEEEEEC---CCCEEEEEEECCCCcCeEEECCCCC
Confidence 000000011133334678999987 665432 111 1000011246999998 6666533224455688999999999
Q ss_pred eEEEEeeccccceEEEEEcCCCCC
Q 005240 312 ALVNETWYKTSQTRTWLVCPGSKD 335 (706)
Q Consensus 312 ~l~~~~~~~~~~~~l~~~d~~~~~ 335 (706)
.++|..+.. ...|.++|+++.+
T Consensus 331 ~~l~v~~~~--~~~V~ViD~~t~~ 352 (373)
T 2mad_H 331 PDLYALSAG--TEVLHIYDAGAGD 352 (373)
T ss_pred eEEEEEcCC--CCeEEEEECCCCC
Confidence 666654332 3579999999853
No 244
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.15 E-value=1.6e-10 Score=122.44 Aligned_cols=134 Identities=16% Similarity=0.072 Sum_probs=89.0
Q ss_pred EEccCCeEEEEEEEecCCC-CCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHH----HCCe---EE
Q 005240 487 YQRKDGVPLTATLYLPPGY-DQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL----ARRF---AV 558 (706)
Q Consensus 487 ~~~~dg~~i~~~l~~P~~~-~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~G~---~v 558 (706)
+...||..|.+..+.|++- .....++.|+||++||.+... ..+ ...+..|+ ..|| .|
T Consensus 25 ~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~-----------~~~----~~~~~~L~~~~~~~G~~~~~v 89 (398)
T 2y6u_A 25 LCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSK-----------VVW----EYYLPRLVAADAEGNYAIDKV 89 (398)
T ss_dssp SSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCG-----------GGG----GGGGGGSCCCBTTTTEEEEEE
T ss_pred ccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcH-----------HHH----HHHHHHHHHhhhhcCcceeEE
Confidence 4456999999999988651 001123458999999974211 111 12344566 3589 89
Q ss_pred EEcCCCCcCCCCCCCC-------chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEE
Q 005240 559 LAGPSIPIIGEGDKLP-------NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGI 631 (706)
Q Consensus 559 ~~~~~~~~~g~g~~~~-------~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v 631 (706)
+..+.+ |+|.+.. ........+.|+.++++++...-.+++.++.++||||||.+++.++.++|++++++|
T Consensus 90 i~~D~~---G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 166 (398)
T 2y6u_A 90 LLIDQV---NHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLI 166 (398)
T ss_dssp EEECCT---TSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEE
T ss_pred EEEcCC---CCCCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEE
Confidence 986665 3443321 122345567777777776532112445569999999999999999999999999999
Q ss_pred eccCCCC
Q 005240 632 ARSGSYN 638 (706)
Q Consensus 632 ~~~~~~d 638 (706)
+.+|...
T Consensus 167 l~~~~~~ 173 (398)
T 2y6u_A 167 LIEPVVI 173 (398)
T ss_dssp EESCCCS
T ss_pred Eeccccc
Confidence 9988654
No 245
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.15 E-value=8.2e-09 Score=107.87 Aligned_cols=226 Identities=15% Similarity=0.108 Sum_probs=132.0
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcC--CCceee-cccCCCccccccccceEEecC--CcEEEEEec
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAE--TGEAKP-LFESPDICLNAVFGSFVWVNN--STLLIFTIP 106 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~--~g~~~~-lt~~~~~~~~~~~~~~~wSpD--g~~l~~~~~ 106 (706)
.+..++|||||++||.... ++ .|.++++. +++..+ +..+.. .+..+.|+|+ +++|+..+.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~--------dg--~i~iw~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSS--------DK--TIKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp CEEEEEECSSSSEEEEEET--------TS--CEEEEEEETTEEEEEEEECCCSS-----CEEEEEECCGGGCSEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEEC--------CC--cEEEEecCCCcceeeeEecCCCC-----cEEEEEeCCCCCCCEEEEecc
Confidence 4888999999999988653 44 44445554 333322 222222 2778999977 888876642
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC---ceecCCC-ceEeeee
Q 005240 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFGTP-AVYTAVE 181 (706)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~---~~~lt~~-~~~~~~~ 181 (706)
+ +.|.++++ +++ ...+... ..+..++
T Consensus 78 d-------------------------------------------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~ 108 (379)
T 3jrp_A 78 D-------------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQ 108 (379)
T ss_dssp T-------------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred C-------------------------------------------------CEEEEEEcCCCceeEeeeecCCCcceEEEE
Confidence 1 46777777 443 2233333 6788999
Q ss_pred eCCC--CcEEEEEeeccCcccccccccccceEEEEecCCCee---EEcccCCCCCCCCcccCccCCCCcceeeec-----
Q 005240 182 PSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV---RELCDLPPAEDIPVCYNSVREGMRSISWRA----- 251 (706)
Q Consensus 182 ~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~l~~~~~~~~~p~~~~~~~~g~~~~~~sp----- 251 (706)
|+|+ |+.|+..+.. ..|.+|++..... ..+.... ..+..+.|+|
T Consensus 109 ~~~~~~~~~l~~~~~d-------------~~i~v~d~~~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 109 WAPHEYGPLLLVASSD-------------GKVSVVEFKENGTTSPIIIDAHA-------------IGVNSASWAPATIEE 162 (379)
T ss_dssp ECCGGGCSEEEEEETT-------------SEEEEEECCTTSCCCEEEEECCT-------------TCEEEEEECCCC---
T ss_pred eCCCCCCCEEEEecCC-------------CcEEEEecCCCCceeeEEecCCC-------------CceEEEEEcCccccc
Confidence 9999 8888776544 3799999985521 1221111 1244778999
Q ss_pred --------CCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-----EEeecccccccceecCC---CceEEE
Q 005240 252 --------DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-----ILHKLDLRFRSVSWCDD---SLALVN 315 (706)
Q Consensus 252 --------dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-----~l~~~~~~~~~~~wspD---g~~l~~ 315 (706)
|++. |+... .+ ..|++||+ .++... .+..+...+..+.|+|| +..|+.
T Consensus 163 ~~~~~~~~~~~~-l~~~~-~d-----------g~i~i~d~---~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 163 DGEHNGTKESRK-FVTGG-AD-----------NLVKIWKY---NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 226 (379)
T ss_dssp -------CTTCE-EEEEE-TT-----------SCEEEEEE---ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred cccccCCCCCCE-EEEEe-CC-----------CeEEEEEe---cCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEE
Confidence 5664 44321 11 24778877 333322 23345667889999999 787776
Q ss_pred EeeccccceEEEEEcCCCCCCCc-eeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 316 ETWYKTSQTRTWLVCPGSKDVAP-RVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 316 ~~~~~~~~~~l~~~d~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
.+. ++..+||.+ .++.... ..+..... .......+.|+|||++|+...
T Consensus 227 ~~~--dg~i~iwd~--~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 227 VSQ--DRTCIIWTQ--DNEQGPWKKTLLKEEK----FPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp EET--TSCEEEEEE--SSTTSCCEEEESSSSC----CSSCEEEEEECSSSCCEEEEE
T ss_pred EeC--CCEEEEEeC--CCCCccceeeeecccc----CCCcEEEEEEcCCCCEEEEec
Confidence 542 234455544 4432111 12211100 000123478999999888765
No 246
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.14 E-value=1.3e-08 Score=114.03 Aligned_cols=221 Identities=10% Similarity=0.020 Sum_probs=136.6
Q ss_pred cceeEeecCCCCCCC-----CeeeeecCCCCCc-ccceeeCC--CCCeEEEEeeccccccccCCceeEEEEEcCCC----
Q 005240 5 TGIGIHRLLPDDSLG-----PEKEVHGYPDGAK-INFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETG---- 72 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g-----~~~~i~~~~~~~~-~~~~~~SP--DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g---- 72 (706)
..|.|+++.. + ..+.+. ..... +..++||| ||++||.... + ..|.++++.++
T Consensus 39 ~~v~v~~~~~----~~~~~~~~~~~~--~h~~~~v~~~~~sp~~~~~~l~s~~~--------d--g~v~vw~~~~~~~~~ 102 (615)
T 1pgu_A 39 KSAFVRCLDD----GDSKVPPVVQFT--GHGSSVVTTVKFSPIKGSQYLCSGDE--------S--GKVIVWGWTFDKESN 102 (615)
T ss_dssp TEEEEEECCS----SCCSSCSEEEEC--TTTTSCEEEEEECSSTTCCEEEEEET--------T--SEEEEEEEEEEGGGT
T ss_pred CeEEEEECCC----CCCccccceEEe--cCCCceEEEEEECcCCCCCEEEEecC--------C--CEEEEEeCCCCcccc
Confidence 3578888876 4 222332 12235 78999999 9999988653 3 45666666544
Q ss_pred --ceee---cccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchh
Q 005240 73 --EAKP---LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYD 147 (706)
Q Consensus 73 --~~~~---lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 147 (706)
+.+. +..... .+..+.|+|||++|+.......
T Consensus 103 ~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~~~~-------------------------------------- 139 (615)
T 1pgu_A 103 SVEVNVKSEFQVLAG-----PISDISWDFEGRRLCVVGEGRD-------------------------------------- 139 (615)
T ss_dssp EEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEEECCSS--------------------------------------
T ss_pred cccccccchhhcccc-----cEEEEEEeCCCCEEEEeccCCC--------------------------------------
Confidence 2222 221222 3778999999999887753210
Q ss_pred hhhhhhcccceEEEEccCCCceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEE-cc
Q 005240 148 ESLFDYYTTAQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LC 225 (706)
Q Consensus 148 ~~~~~~~~~~~l~~~~l~g~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~ 225 (706)
....|++++.......+... ..+..++|+|+|+.++++.... ..|.+|++...+... +.
T Consensus 140 -------~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------------~~v~vwd~~~~~~~~~~~ 200 (615)
T 1pgu_A 140 -------NFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD------------GSVVFYQGPPFKFSASDR 200 (615)
T ss_dssp -------CSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETT------------TEEEEEETTTBEEEEEEC
T ss_pred -------CccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCC------------CcEEEEeCCCcceeeeec
Confidence 11567777733344445444 6788999999999554554432 479999998665433 32
Q ss_pred cCCCCCCCCcccCccCCCCcceeeecC-CCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEe-----eccc
Q 005240 226 DLPPAEDIPVCYNSVREGMRSISWRAD-KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-----KLDL 299 (706)
Q Consensus 226 ~~~~~~~~p~~~~~~~~g~~~~~~spd-g~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-----~~~~ 299 (706)
..... . ..+..+.|+|| ++. |+... . ...|++||+ .+++..... ....
T Consensus 201 ~~~~~-~---------~~v~~~~~~~~~~~~-l~~~~-~-----------dg~i~vwd~---~~~~~~~~~~~~~~~~~~ 254 (615)
T 1pgu_A 201 THHKQ-G---------SFVRDVEFSPDSGEF-VITVG-S-----------DRKISCFDG---KSGEFLKYIEDDQEPVQG 254 (615)
T ss_dssp SSSCT-T---------CCEEEEEECSTTCCE-EEEEE-T-----------TCCEEEEET---TTCCEEEECCBTTBCCCS
T ss_pred ccCCC-C---------ceEEEEEECCCCCCE-EEEEe-C-----------CCeEEEEEC---CCCCEeEEecccccccCC
Confidence 22110 0 02447899999 875 54332 1 124888888 555544433 5567
Q ss_pred ccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 300 ~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
.+..+.|+ |++.|+..+. ...|.++|+.++
T Consensus 255 ~v~~~~~~-~~~~l~~~~~----d~~i~~wd~~~~ 284 (615)
T 1pgu_A 255 GIFALSWL-DSQKFATVGA----DATIRVWDVTTS 284 (615)
T ss_dssp CEEEEEES-SSSEEEEEET----TSEEEEEETTTT
T ss_pred ceEEEEEc-CCCEEEEEcC----CCcEEEEECCCC
Confidence 78899999 9998887652 234777777763
No 247
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.14 E-value=1.2e-08 Score=116.71 Aligned_cols=217 Identities=13% Similarity=0.102 Sum_probs=132.6
Q ss_pred ceeEeecCCCCCC-C-CeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeec-ccCCC
Q 005240 6 GIGIHRLLPDDSL-G-PEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL-FESPD 82 (706)
Q Consensus 6 ~~~~~~~~~~~~~-g-~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-t~~~~ 82 (706)
.|.|.++..+... + ..+.++++. ..+..+.|||||++|+..+. ...|.++|+.+++..+. ..+..
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~~~h~--~~v~~v~~s~~g~~l~sgs~----------Dg~v~vwd~~~~~~~~~~~~h~~ 473 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRLTGHS--HFVEDVVLSSDGQFALSGSW----------DGELRLWDLAAGVSTRRFVGHTK 473 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEEECCS--SCEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSS
T ss_pred cEEEEEccCCCcccccccceecCCC--CcEEEEEECCCCCEEEEEeC----------CCcEEEEECCCCcceeEEeCCCC
Confidence 5788888762211 1 122344332 24888999999999987642 35788889888765443 32322
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEE
Q 005240 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (706)
Q Consensus 83 ~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 162 (706)
.+..+.|+|||++|+..+.+ +.|.++
T Consensus 474 -----~v~~~~~s~~~~~l~s~s~D-------------------------------------------------~~i~iw 499 (694)
T 3dm0_A 474 -----DVLSVAFSLDNRQIVSASRD-------------------------------------------------RTIKLW 499 (694)
T ss_dssp -----CEEEEEECTTSSCEEEEETT-------------------------------------------------SCEEEE
T ss_pred -----CEEEEEEeCCCCEEEEEeCC-------------------------------------------------CEEEEE
Confidence 27789999999988876431 456666
Q ss_pred ccCCC-ceecCC----C-ceEeeeeeCCCCcE-EEEEeeccCcccccccccccceEEEEecCCCeeEE-cccCCCCCCCC
Q 005240 163 SLDGT-AKDFGT----P-AVYTAVEPSPDQKY-VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE-LCDLPPAEDIP 234 (706)
Q Consensus 163 ~l~g~-~~~lt~----~-~~~~~~~~SpDG~~-i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~~~~~~~~~p 234 (706)
++.+. ...+.. . ..+..++|+|++.. ++++.... ..|.+||+.+.+... +..+.
T Consensus 500 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------------~~v~vwd~~~~~~~~~~~~h~------ 561 (694)
T 3dm0_A 500 NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD------------KTVKVWNLSNCKLRSTLAGHT------ 561 (694)
T ss_dssp CTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT------------SCEEEEETTTCCEEEEECCCS------
T ss_pred ECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC------------CeEEEEECCCCcEEEEEcCCC------
Confidence 76442 222221 1 45789999999842 33333321 379999998665443 32221
Q ss_pred cccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEE
Q 005240 235 VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALV 314 (706)
Q Consensus 235 ~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~ 314 (706)
..+..++|+|||+. |+... . .+.|.+||+ .+++..........+..+.|+||+..|+
T Consensus 562 -------~~v~~v~~spdg~~-l~sg~-~-----------Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 562 -------GYVSTVAVSPDGSL-CASGG-K-----------DGVVLLWDL---AEGKKLYSLEANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp -------SCEEEEEECTTSSE-EEEEE-T-----------TSBCEEEET---TTTEEEECCBCSSCEEEEEECSSSSEEE
T ss_pred -------CCEEEEEEeCCCCE-EEEEe-C-----------CCeEEEEEC---CCCceEEEecCCCcEEEEEEcCCCcEEE
Confidence 12457899999986 44221 1 124778888 4443322223355677889999998777
Q ss_pred EEeeccccceEEEEEcCCCC
Q 005240 315 NETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 315 ~~~~~~~~~~~l~~~d~~~~ 334 (706)
... .. .|.++|+.++
T Consensus 619 ~~~-~~----~i~iwd~~~~ 633 (694)
T 3dm0_A 619 AAT-EH----GIKIWDLESK 633 (694)
T ss_dssp EEE-TT----EEEEEETTTT
T ss_pred EEc-CC----CEEEEECCCC
Confidence 643 21 2677777763
No 248
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.4e-08 Score=118.94 Aligned_cols=82 Identities=7% Similarity=0.020 Sum_probs=51.0
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecc------
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF------ 78 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt------ 78 (706)
..|.|+|+.. ++..... .....+..++|||||++|+.... ...|.++|+++++.....
T Consensus 79 ~~v~lWd~~~----~~~~~~~--~~~~~V~~v~~sp~g~~l~sgs~----------dg~V~lwd~~~~~~~~~~i~~~~~ 142 (902)
T 2oaj_A 79 DTVYVLSLYS----QKVLTTV--FVPGKITSIDTDASLDWMLIGLQ----------NGSMIVYDIDRDQLSSFKLDNLQK 142 (902)
T ss_dssp CEEEEEETTT----CSEEEEE--ECSSCEEEEECCTTCSEEEEEET----------TSCEEEEETTTTEEEEEEECCHHH
T ss_pred CeEEEEECCC----CcEEEEE--cCCCCEEEEEECCCCCEEEEEcC----------CCcEEEEECCCCccccceeccccc
Confidence 4688888876 5443222 22235889999999999987642 356777888887653111
Q ss_pred ---cCCCccccccccceEEecCC-cEEEEE
Q 005240 79 ---ESPDICLNAVFGSFVWVNNS-TLLIFT 104 (706)
Q Consensus 79 ---~~~~~~~~~~~~~~~wSpDg-~~l~~~ 104 (706)
.... ....+..++|+|++ ..|+..
T Consensus 143 ~~~~~~~--h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 143 SSFFPAA--RLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp HHTCSSS--CCCCCCEEEEETTEEEEEEEE
T ss_pred ccccccc--CCCCeEEEEEccCCCCEEEEE
Confidence 0011 11237789999975 455544
No 249
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.13 E-value=1.4e-08 Score=104.48 Aligned_cols=145 Identities=8% Similarity=0.025 Sum_probs=88.8
Q ss_pred ceEEEEccC-CCceecC-CC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCC
Q 005240 157 AQLVLGSLD-GTAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (706)
Q Consensus 157 ~~l~~~~l~-g~~~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~ 233 (706)
..|++++++ ++.+.+. .. ..+..++++|||+.++....... ....|++++.+++..+.+.......
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~~~-- 134 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFK---------STGGIFAATENGDNLQDIIEDLSTA-- 134 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSS---------SCCEEEEECTTSCSCEEEECSSSSC--
T ss_pred CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCC---------CCceEEEEeCCCCEEEEEEccCccC--
Confidence 579999984 5666554 22 56889999999975543322200 0247999999987766433211110
Q ss_pred CcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceE
Q 005240 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLAL 313 (706)
Q Consensus 234 p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l 313 (706)
..+..+.++|||+ |++....... ......|++++. ++++.+.+.........+.|+|||+.|
T Consensus 135 --------~~~~~i~~d~~g~--l~v~~~~~~~-----~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 135 --------YCIDDMVFDSKGG--FYFTDFRGYS-----TNPLGGVYYVSP---DFRTVTPIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp --------CCEEEEEECTTSC--EEEEECCCBT-----TBCCEEEEEECT---TSCCEEEEEEEESSEEEEEECTTSSEE
T ss_pred --------CcccceEECCCCC--EEEEeccccc-----cCCCceEEEEeC---CCCEEEEeecCCCcccceEECCCCCEE
Confidence 1234778999986 5554321100 011235888887 666766665444456778999999988
Q ss_pred EEEeeccccceEEEEEcCCC
Q 005240 314 VNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 314 ~~~~~~~~~~~~l~~~d~~~ 333 (706)
++... ....|+++++++
T Consensus 197 ~v~~~---~~~~i~~~d~~~ 213 (333)
T 2dg1_A 197 WVTET---TANRLHRIALED 213 (333)
T ss_dssp EEEEG---GGTEEEEEEECT
T ss_pred EEEeC---CCCeEEEEEecC
Confidence 77542 234688888754
No 250
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.13 E-value=8.6e-11 Score=128.79 Aligned_cols=132 Identities=20% Similarity=0.195 Sum_probs=93.9
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHH-HCCeEEEEcCCC-Cc
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSI-PI 566 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~-~~ 566 (706)
+.|+..+ .+|.|....+++ ++|+||++|||++..++. ..+ .. ..|+ ..|++|+.+++| +.
T Consensus 95 ~edcl~l--nv~~P~~~~~~~--~~Pv~v~iHGG~~~~g~~--------~~~-----~~-~~la~~~g~vvv~~nYRlg~ 156 (542)
T 2h7c_A 95 SEDCLYL--NIYTPADLTKKN--RLPVMVWIHGGGLMVGAA--------STY-----DG-LALAAHENVVVVTIQYRLGI 156 (542)
T ss_dssp ESCCCEE--EEEECSCTTSCC--CEEEEEEECCSTTTSCCS--------TTS-----CC-HHHHHHHTCEEEEECCCCHH
T ss_pred CCCCcEE--EEEECCCCCCCC--CCCEEEEECCCcccCCCc--------ccc-----CH-HHHHhcCCEEEEecCCCCcc
Confidence 4577555 488998754322 589999999998753222 111 11 2345 489999998888 55
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHHHHHHc--C-CCCCCcEEEEEechHHHHHHHHHHh--CCCceeEEEeccCCCC
Q 005240 567 IGEGDKLPNDRFVEQLVSSAEAAVEEVVRR--G-VADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYN 638 (706)
Q Consensus 567 ~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~--~-~id~~~i~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~d 638 (706)
.|++.........+..+.|+..|++|+.+. . -.||+||.|+|+|+||+++++++.. .+.+|+++|+.+|...
T Consensus 157 ~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 157 WGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp HHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred ccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 455433222122234578999999999885 2 3799999999999999999999987 3579999999999765
No 251
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.12 E-value=2.6e-09 Score=105.42 Aligned_cols=116 Identities=16% Similarity=0.053 Sum_probs=80.3
Q ss_pred EEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCC
Q 005240 486 KYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIP 565 (706)
Q Consensus 486 ~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 565 (706)
++...||..+.....-+ -|.||++||.+.. ...+ ...+..|+ .||.|+..+.+
T Consensus 6 ~~~~~~g~~l~~~~~g~----------~~~vv~lHG~~~~-----------~~~~----~~~~~~l~-~~~~vi~~d~~- 58 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSGS----------GPPVVLVGGALST-----------RAGG----APLAERLA-PHFTVICYDRR- 58 (262)
T ss_dssp EEECTTSCEEEEEEEEC----------SSEEEEECCTTCC-----------GGGG----HHHHHHHT-TTSEEEEECCT-
T ss_pred eEEcCCCcEEEEEEcCC----------CCcEEEECCCCcC-----------hHHH----HHHHHHHh-cCcEEEEEecC-
Confidence 35566888888666531 2568889996421 0111 23345555 89999996665
Q ss_pred cCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 566 IIGEGDKLPN-DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 566 ~~g~g~~~~~-~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
|+|.+... ........+|+.++++.+ + .++.++|||+||++++.++.++| +++++++.+|...
T Consensus 59 --G~G~S~~~~~~~~~~~~~~~~~~~~~l------~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~ 122 (262)
T 3r0v_A 59 --GRGDSGDTPPYAVEREIEDLAAIIDAA------G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYA 122 (262)
T ss_dssp --TSTTCCCCSSCCHHHHHHHHHHHHHHT------T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCC
T ss_pred --CCcCCCCCCCCCHHHHHHHHHHHHHhc------C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcc
Confidence 45555332 223455667777666654 3 68999999999999999999999 9999999998654
No 252
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.11 E-value=5.8e-08 Score=100.25 Aligned_cols=312 Identities=13% Similarity=0.110 Sum_probs=163.3
Q ss_pred eeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecC-CCCCCCC
Q 005240 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS-SRRDPPK 114 (706)
Q Consensus 36 ~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~-~~~~~~~ 114 (706)
..-.|||++| |+.+. ........|+++|+++++...-...... .. +.+||||++||+.... .+...
T Consensus 38 ~~~~pd~~~v-yV~~~----~~~~~~~~V~ViD~~t~~v~~~I~vG~~-----P~-va~spDG~~lyVan~~~~r~~~-- 104 (386)
T 3sjl_D 38 EAPAPDARRV-YVNDP----AHFAAVTQQFVIDGEAGRVIGMIDGGFL-----PN-PVVADDGSFIAHASTVFSRIAR-- 104 (386)
T ss_dssp CCCCCCTTEE-EEEEC----GGGCSSEEEEEEETTTTEEEEEEEECSS-----CE-EEECTTSSCEEEEEEEEEETTE--
T ss_pred eccCCCCCEE-EEEcC----cccCCCCEEEEEECCCCeEEEEEECCCC-----Cc-EEECCCCCEEEEEccccccccc--
Confidence 3447999998 55431 0001247999999998875443222221 33 8999999998876310 00000
Q ss_pred CCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc-eecCCC--------ceEeeeeeCC
Q 005240 115 KTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGTP--------AVYTAVEPSP 184 (706)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~-~~lt~~--------~~~~~~~~Sp 184 (706)
......|.++|. +++. ..+.-+ .....+.+||
T Consensus 105 --------------------------------------G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp 146 (386)
T 3sjl_D 105 --------------------------------------GERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP 146 (386)
T ss_dssp --------------------------------------EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT
T ss_pred --------------------------------------CCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC
Confidence 001256888898 4443 233211 2455789999
Q ss_pred CCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCc-ceeeecCCCceEEEEEec
Q 005240 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR-SISWRADKPSTLYWVEAQ 263 (706)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~-~~~~spdg~~~l~~~~~~ 263 (706)
||++|++..... ...|.++|+.+.++..-...++... .+ +.+.+ .+..++||+ ++++...
T Consensus 147 DGk~lyVan~~~-----------~~~VsVID~~t~~vv~tI~v~g~~~---~~---P~g~~~~~~~~~DG~--~~~v~~~ 207 (386)
T 3sjl_D 147 DGKTLLFYQFSP-----------APAVGVVDLEGKAFKRMLDVPDCYH---IF---PTAPDTFFMHCRDGS--LAKVAFG 207 (386)
T ss_dssp TSSEEEEEECSS-----------SCEEEEEETTTTEEEEEEECCSEEE---EE---EEETTEEEEEETTSC--EEEEECC
T ss_pred CCCEEEEEEcCC-----------CCeEEEEECCCCcEEEEEECCCcce---ee---cCCCceeEEECCCCC--EEEEECC
Confidence 999998765321 2479999999776543222222100 00 02222 347788887 3434221
Q ss_pred cCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceec-CCCceEEEEeeccccceEEEEEcCCCCCCCceeee
Q 005240 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC-DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLF 342 (706)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ws-pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 342 (706)
..+.... .+.. ..+. ........+.|. +||+.+ |.+. ..++|.+|+.+.. +..+-
T Consensus 208 ~~g~v~~---~~~~--~~~~------------~~~~~~~~~~~~~~dG~~~-~vs~----~g~V~v~d~~~~~--~~v~~ 263 (386)
T 3sjl_D 208 TEGTPEI---THTE--VFHP------------EDEFLINHPAYSQKAGRLV-WPTY----TGKIHQIDLSSGD--AKFLP 263 (386)
T ss_dssp SSSCCEE---EECC--CCSC------------TTSCBCSCCEEETTTTEEE-EEBT----TSEEEEEECTTSS--CEECC
T ss_pred CCCeEEE---eecc--eecc------------ccccccccceeEcCCCcEE-EEeC----CCEEEEEECCCCc--ceeec
Confidence 1111100 0000 0000 011122345674 688644 4432 2369999998742 22221
Q ss_pred cCcc-cc----cccCCCC-CceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccch
Q 005240 343 DRVF-EN----VYSDPGS-PMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE 416 (706)
Q Consensus 343 ~~~~-~~----~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 416 (706)
...+ .. ....|+. ..+..+++++++++..... ..+.+. ..-.+++.+|+++++..+-+.....
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~----------~~~~hk-~~~~~V~viD~~t~kv~~~i~vg~~ 332 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR----------DEWRHK-TASRFVVVLDAKTGERLAKFEMGHE 332 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC----------CTTCTT-SCEEEEEEEETTTCCEEEEEEEEEE
T ss_pred ceeccccccccccccCCCcceeeECCCCCeEEEEeccc----------cccccC-CCCCEEEEEECCCCeEEEEEECCCC
Confidence 1110 00 0011222 2345577888777754210 011111 1123689999999987666554321
Q ss_pred hhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeE
Q 005240 417 KYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (706)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~ 466 (706)
.+...+|+|++.++|+.+. .-..|.++|.++++..+
T Consensus 333 ------------~~~lavs~D~~~~ly~tn~--~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 333 ------------IDSINVSQDEKPLLYALST--GDKTLYIHDAESGEELR 368 (386)
T ss_dssp ------------ECEEEECSSSSCEEEEEET--TTTEEEEEETTTCCEEE
T ss_pred ------------cceEEECCCCCeEEEEEcC--CCCeEEEEECCCCcEEE
Confidence 2357899999866666443 24568999999887544
No 253
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.11 E-value=6.8e-10 Score=111.89 Aligned_cols=103 Identities=19% Similarity=0.225 Sum_probs=74.5
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc-hhhHHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVE 591 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~D~~~~~~ 591 (706)
.|.||++||.+.. ...+. ......|++.||.|+..+.+|. |.+... ........+|+..+++
T Consensus 43 ~~~vv~lHG~~~~-----------~~~~~---~~~~~~l~~~g~~vi~~D~~G~---G~s~~~~~~~~~~~~~~~~~~l~ 105 (293)
T 3hss_A 43 GDPVVFIAGRGGA-----------GRTWH---PHQVPAFLAAGYRCITFDNRGI---GATENAEGFTTQTMVADTAALIE 105 (293)
T ss_dssp SEEEEEECCTTCC-----------GGGGT---TTTHHHHHHTTEEEEEECCTTS---GGGTTCCSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCc-----------hhhcc---hhhhhhHhhcCCeEEEEccCCC---CCCCCcccCCHHHHHHHHHHHHH
Confidence 3789999997421 11111 1246677899999999777643 433332 2235566777777777
Q ss_pred HHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 592 ~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
++ +.+++.++|||+||.+++.++.++|++++++++.+|...
T Consensus 106 ~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 146 (293)
T 3hss_A 106 TL------DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGR 146 (293)
T ss_dssp HH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSS
T ss_pred hc------CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheeccccc
Confidence 66 346899999999999999999999999999999998643
No 254
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.11 E-value=2.4e-08 Score=100.93 Aligned_cols=258 Identities=8% Similarity=-0.010 Sum_probs=147.8
Q ss_pred CCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEec
Q 005240 17 SLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVN 96 (706)
Q Consensus 17 ~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSp 96 (706)
.+.+.+.+.. .......|+|+|||+.|+++.. ....|++++++++ .+.+..... .+..+.++|
T Consensus 16 ~~~~~~~l~~--~~~~~eg~~~d~~g~~l~~~~~---------~~~~i~~~~~~~~-~~~~~~~~~-----~~~~l~~~~ 78 (296)
T 3e5z_A 16 AGAEARRLAD--GFTWTEGPVYVPARSAVIFSDV---------RQNRTWAWSDDGQ-LSPEMHPSH-----HQNGHCLNK 78 (296)
T ss_dssp TTCCCEEEEC--CCSSEEEEEEEGGGTEEEEEEG---------GGTEEEEEETTSC-EEEEESSCS-----SEEEEEECT
T ss_pred CCCcEEEEec--CCccccCCeEeCCCCEEEEEeC---------CCCEEEEEECCCC-eEEEECCCC-----CcceeeECC
Confidence 3455566652 2234668999999998888753 3368999999988 665543322 256789999
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCC-
Q 005240 97 NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP- 174 (706)
Q Consensus 97 Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~- 174 (706)
||+.++... ....|++++. +|+.+.+...
T Consensus 79 dg~l~v~~~-------------------------------------------------~~~~i~~~d~~~g~~~~~~~~~ 109 (296)
T 3e5z_A 79 QGHLIACSH-------------------------------------------------GLRRLERQREPGGEWESIADSF 109 (296)
T ss_dssp TCCEEEEET-------------------------------------------------TTTEEEEECSTTCCEEEEECEE
T ss_pred CCcEEEEec-------------------------------------------------CCCeEEEEcCCCCcEEEEeecc
Confidence 999644331 1157888898 7766655332
Q ss_pred -----ceEeeeeeCCCCcEEEEEeeccCc--cc---ccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCC
Q 005240 175 -----AVYTAVEPSPDQKYVLITSMHRPY--SY---KVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGM 244 (706)
Q Consensus 175 -----~~~~~~~~SpDG~~i~~~~~~~~~--~~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~ 244 (706)
..+..++++|||+ |+++...... .. ..........|+.++.+ ++.+.+.... ..+
T Consensus 110 ~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~ 174 (296)
T 3e5z_A 110 EGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-------------VKP 174 (296)
T ss_dssp TTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-------------SSE
T ss_pred CCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-------------CCC
Confidence 2345689999996 5554221000 00 00000012478888877 4444443221 113
Q ss_pred cceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc---eEEee-cccccccceecCCCceEEEEeecc
Q 005240 245 RSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP---EILHK-LDLRFRSVSWCDDSLALVNETWYK 320 (706)
Q Consensus 245 ~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~l~~-~~~~~~~~~wspDg~~l~~~~~~~ 320 (706)
..++|+|||+. | +.. .. ...|++++++ ..+.. ..+.. .......+.+++||+.++ +.
T Consensus 175 ~gi~~s~dg~~-l-v~~-~~----------~~~i~~~~~~--~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v-~~--- 235 (296)
T 3e5z_A 175 NGLAFLPSGNL-L-VSD-TG----------DNATHRYCLN--ARGETEYQGVHFTVEPGKTDGLRVDAGGLIWA-SA--- 235 (296)
T ss_dssp EEEEECTTSCE-E-EEE-TT----------TTEEEEEEEC--SSSCEEEEEEEECCSSSCCCSEEEBTTSCEEE-EE---
T ss_pred ccEEECCCCCE-E-EEe-CC----------CCeEEEEEEC--CCCcCcCCCeEeeCCCCCCCeEEECCCCCEEE-Ec---
Confidence 36899999986 4 442 11 1247788772 24444 22221 233456788999997433 32
Q ss_pred ccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEe-ccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceee
Q 005240 321 TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTR-TSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDL 399 (706)
Q Consensus 321 ~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~ 399 (706)
...|+++++++. ....+ .... +...+.+ ++||+.|+++... .|++
T Consensus 236 --~~~v~~~~~~g~--~~~~~-~~~~-------~~~~~~f~~~d~~~L~v~t~~----------------------~l~~ 281 (296)
T 3e5z_A 236 --GDGVHVLTPDGD--ELGRV-LTPQ-------TTSNLCFGGPEGRTLYMTVST----------------------EFWS 281 (296)
T ss_dssp --TTEEEEECTTSC--EEEEE-ECSS-------CCCEEEEESTTSCEEEEEETT----------------------EEEE
T ss_pred --CCeEEEECCCCC--EEEEE-ECCC-------CceeEEEECCCCCEEEEEcCC----------------------eEEE
Confidence 235889998752 22222 1110 1123556 5888888776521 4778
Q ss_pred eecCCCcee
Q 005240 400 FDINTGSKE 408 (706)
Q Consensus 400 ~d~~~g~~~ 408 (706)
++.++.+.+
T Consensus 282 ~~~~~~~~~ 290 (296)
T 3e5z_A 282 IETNVRGLE 290 (296)
T ss_dssp EECSCCBCC
T ss_pred EEccccccc
Confidence 888776543
No 255
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.11 E-value=1.9e-08 Score=103.55 Aligned_cols=191 Identities=16% Similarity=0.198 Sum_probs=110.4
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCcee--e-cccCCCccccccccceEEecCCcEEEEEecCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK--P-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~--~-lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~ 108 (706)
.+..+.|||| .||.... + ..|.++++.++... . +..... ...+..+.|+|||++|+..+.+
T Consensus 16 ~v~~~~~s~~--~las~~~--------D--~~i~lw~~~~~~~~~~~~~~~~~h---~~~v~~v~~sp~~~~las~s~D- 79 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGST--------D--RKIKLVSVKYDDFTLIDVLDETAH---KKAIRSVAWRPHTSLLAAGSFD- 79 (330)
T ss_dssp CEEEEEEETT--EEEEEES--------S--SCEEEEECSSSCCEEEEEECTTCC---CSCEEEEEECTTSSEEEEEETT-
T ss_pred ceeeeccCCC--EEEEEcC--------C--CEEEEEEecCCCeEEEEEEecCCc---cCCEEEEEECCCCCEEEEEeCC-
Confidence 4788899998 6655432 3 45666677665322 2 211101 1137789999999988876531
Q ss_pred CCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC--------C-ceecCCC-ceEe
Q 005240 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG--------T-AKDFGTP-AVYT 178 (706)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g--------~-~~~lt~~-~~~~ 178 (706)
+.|.++++.. + ...+... ..+.
T Consensus 80 ------------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 111 (330)
T 2hes_X 80 ------------------------------------------------STVSIWAKEESADRTFEMDLLAIIEGHENEVK 111 (330)
T ss_dssp ------------------------------------------------SCEEEEEC-------CCCEEEEEEC----CEE
T ss_pred ------------------------------------------------CcEEEEEcccCcCccccceeEEEEcCCCCcEE
Confidence 2344444421 1 1123333 5788
Q ss_pred eeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC-CCe----eEEcccCCCCCCCCcccCccCCCCcceeeecCC
Q 005240 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKL----VRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (706)
Q Consensus 179 ~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~----~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg 253 (706)
.++|||||++|+..+.+ ..|.+|++. ++. ...+..+. ..+..+.|+||+
T Consensus 112 ~v~~sp~g~~las~s~D-------------~~v~iwd~~~~~~~~~~~~~~~~h~-------------~~v~~v~~~p~~ 165 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRD-------------KSVWIWETDESGEEYECISVLQEHS-------------QDVKHVIWHPSE 165 (330)
T ss_dssp EEEECTTSCEEEEEETT-------------SCEEEEECCTTCCCCEEEEEECCCS-------------SCEEEEEECSSS
T ss_pred EEEECCCCCEEEEEeCC-------------CEEEEEeccCCCCCeEEEEEeccCC-------------CceEEEEECCCC
Confidence 99999999998866543 379999994 221 12222221 124578999999
Q ss_pred CceEEEEEeccCCCCccccCccceeeeecCCCCCCCC---ceEEeecccccccceecCC--CceEEEEeeccccceEEEE
Q 005240 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---PEILHKLDLRFRSVSWCDD--SLALVNETWYKTSQTRTWL 328 (706)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---~~~l~~~~~~~~~~~wspD--g~~l~~~~~~~~~~~~l~~ 328 (706)
+. |+-. ..+ ..|.+||. ..+. ...+..+...+..+.|+|+ +..|+..+ .++..+||.
T Consensus 166 ~~-l~s~-s~D-----------~~i~iW~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s--~D~~v~iw~ 227 (330)
T 2hes_X 166 AL-LASS-SYD-----------DTVRIWKD---YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS--DDSTVRVWK 227 (330)
T ss_dssp SE-EEEE-ETT-----------SCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE--TTSCEEEEE
T ss_pred CE-EEEE-cCC-----------CeEEEEEC---CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe--CCCeEEEEE
Confidence 85 4422 111 23667766 3332 2334455677888999999 55666544 235566776
Q ss_pred Ec
Q 005240 329 VC 330 (706)
Q Consensus 329 ~d 330 (706)
+.
T Consensus 228 ~~ 229 (330)
T 2hes_X 228 YM 229 (330)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 256
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.11 E-value=2.1e-10 Score=124.33 Aligned_cols=132 Identities=21% Similarity=0.211 Sum_probs=93.0
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCC-eEEEEcCCC-Cc
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARR-FAVLAGPSI-PI 566 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~~-~~ 566 (706)
+.|+..+ -+|.|.. .. .++|+||++|||++..++.... ......|+++| ++|+..++| +.
T Consensus 81 ~edcl~l--~v~~P~~--~~--~~~Pviv~iHGGg~~~g~~~~~------------~~~~~~la~~~~~vvv~~nYRlg~ 142 (498)
T 2ogt_A 81 SEDGLYL--NIWSPAA--DG--KKRPVLFWIHGGAFLFGSGSSP------------WYDGTAFAKHGDVVVVTINYRMNV 142 (498)
T ss_dssp BSCCCEE--EEEESCS--SS--CCEEEEEEECCSTTTSCCTTCG------------GGCCHHHHHHHTCEEEEECCCCHH
T ss_pred CCCCcEE--EEEecCC--CC--CCCcEEEEEcCCccCCCCCCCC------------cCCHHHHHhCCCEEEEeCCCcCch
Confidence 4566555 4778863 22 2589999999998653222111 11235677766 999998888 33
Q ss_pred CCCCCCCC-----chhhHHHHHHHHHHHHHHHHHcC--C-CCCCcEEEEEechHHHHHHHHHHhC--CCceeEEEeccCC
Q 005240 567 IGEGDKLP-----NDRFVEQLVSSAEAAVEEVVRRG--V-ADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGS 636 (706)
Q Consensus 567 ~g~g~~~~-----~~~~~~~~~~D~~~~~~~l~~~~--~-id~~~i~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~ 636 (706)
.|++.... ....++..+.|+..|++|++++. + +|++||.|+|+|+||++++.++... ..+|+++|+.+|.
T Consensus 143 ~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 222 (498)
T 2ogt_A 143 FGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGS 222 (498)
T ss_dssp HHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCC
T ss_pred hhccCchhhccccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCC
Confidence 35543322 12234566899999999998862 2 7999999999999999999888753 4689999999997
Q ss_pred CC
Q 005240 637 YN 638 (706)
Q Consensus 637 ~d 638 (706)
..
T Consensus 223 ~~ 224 (498)
T 2ogt_A 223 GS 224 (498)
T ss_dssp TT
T ss_pred cc
Confidence 65
No 257
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.10 E-value=1.1e-10 Score=128.09 Aligned_cols=132 Identities=17% Similarity=0.178 Sum_probs=91.7
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCC-Cc
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSI-PI 566 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~-~~ 566 (706)
+.|+..+. +|.|... . +.++|+||++|||++..++.... ......|++ .|++|+.++|| +.
T Consensus 93 ~edcl~l~--v~~P~~~-~--~~~~Pviv~iHGGg~~~g~~~~~------------~~~~~~la~~~g~vvv~~nYRlg~ 155 (543)
T 2ha2_A 93 SEDCLYLN--VWTPYPR-P--ASPTPVLIWIYGGGFYSGAASLD------------VYDGRFLAQVEGAVLVSMNYRVGT 155 (543)
T ss_dssp ESCCCEEE--EEEESSC-C--SSCEEEEEEECCSTTTCCCTTSG------------GGCTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcCCeEE--EeecCCC-C--CCCCeEEEEECCCccccCCCCCC------------cCChHHHHhcCCEEEEEecccccc
Confidence 45775554 6788752 2 23589999999998654222111 112345665 89999998888 44
Q ss_pred CCCCCCC-CchhhHHHHHHHHHHHHHHHHHc--CC-CCCCcEEEEEechHHHHHHHHHHhC--CCceeEEEeccCCC
Q 005240 567 IGEGDKL-PNDRFVEQLVSSAEAAVEEVVRR--GV-ADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSY 637 (706)
Q Consensus 567 ~g~g~~~-~~~~~~~~~~~D~~~~~~~l~~~--~~-id~~~i~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~ 637 (706)
.|++... ......+..+.|+..|++|++++ .+ .||+||.|+|+|+||++++.++... +.+|+++|+.+|..
T Consensus 156 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 156 FGFLALPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp HHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 4554331 11112344588999999999985 22 7999999999999999998888653 46899999999864
No 258
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.10 E-value=1.3e-08 Score=104.90 Aligned_cols=214 Identities=6% Similarity=-0.055 Sum_probs=133.1
Q ss_pred cceeEeecCCCCCCCC----eeeeecCCCCCcccceeeCCCCC-eEEEEeeccccccccCCceeEEEEEc-CCCceeecc
Q 005240 5 TGIGIHRLLPDDSLGP----EKEVHGYPDGAKINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADA-ETGEAKPLF 78 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~----~~~i~~~~~~~~~~~~~~SPDG~-~laf~~~~~~~~~~~~~~~~l~~~d~-~~g~~~~lt 78 (706)
..|.|+++.. ++ .+.+.. ....+..+.|+|||+ .|+.... ...|.++++ ++++...+.
T Consensus 33 ~~v~iw~~~~----~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~----------dg~i~~wd~~~~~~~~~~~ 96 (342)
T 1yfq_A 33 GSLTVYKFDI----QAKNVDLLQSLR--YKHPLLCCNFIDNTDLQIYVGTV----------QGEILKVDLIGSPSFQALT 96 (342)
T ss_dssp SEEEEEEEET----TTTEEEEEEEEE--CSSCEEEEEEEESSSEEEEEEET----------TSCEEEECSSSSSSEEECB
T ss_pred CeEEEEEeCC----CCccccceeeee--cCCceEEEEECCCCCcEEEEEcC----------CCeEEEEEeccCCceEecc
Confidence 4588899877 55 444442 233588999999999 8877542 357888899 888887775
Q ss_pred c--CCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhccc
Q 005240 79 E--SPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTT 156 (706)
Q Consensus 79 ~--~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 156 (706)
. +.. .+..+.|+| ++.|+..+.+
T Consensus 97 ~~~~~~-----~v~~l~~~~-~~~l~s~~~d------------------------------------------------- 121 (342)
T 1yfq_A 97 NNEANL-----GICRICKYG-DDKLIAASWD------------------------------------------------- 121 (342)
T ss_dssp SCCCCS-----CEEEEEEET-TTEEEEEETT-------------------------------------------------
T ss_pred ccCCCC-----ceEEEEeCC-CCEEEEEcCC-------------------------------------------------
Confidence 4 333 277899999 8887766421
Q ss_pred ceEEEEcc-C---------CC-ceecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC-Ce--eE
Q 005240 157 AQLVLGSL-D---------GT-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-KL--VR 222 (706)
Q Consensus 157 ~~l~~~~l-~---------g~-~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~--~~ 222 (706)
+.|.++++ + ++ ...+.....+..++|+|++ |+..... ..|.+|++.. .. ..
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d-------------~~i~i~d~~~~~~~~~~ 186 (342)
T 1yfq_A 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNN-------------SQVQWFRLPLCEDDNGT 186 (342)
T ss_dssp SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEEST-------------TEEEEEESSCCTTCCCE
T ss_pred CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCC-------------CeEEEEECCccccccce
Confidence 46667776 3 42 2223322678899999998 5444332 3799999986 32 11
Q ss_pred EcccCCCCCCCCcccCccCCCCcceeeec-CCCceEEEEEeccCCCCccccCccceeeeecCCCCC-----CCCceEEee
Q 005240 223 ELCDLPPAEDIPVCYNSVREGMRSISWRA-DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAE-----GEKPEILHK 296 (706)
Q Consensus 223 ~l~~~~~~~~~p~~~~~~~~g~~~~~~sp-dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-----~~~~~~l~~ 296 (706)
...... . ..+..+.|+| +++. |+... .+ +.+.+++.+. . ......+..
T Consensus 187 ~~~~~~-~-----------~~i~~i~~~~~~~~~-l~~~~-~d-----------g~i~i~~~~~-~~~~~~~~~~~~~~~ 240 (342)
T 1yfq_A 187 IEESGL-K-----------YQIRDVALLPKEQEG-YACSS-ID-----------GRVAVEFFDD-QGDDYNSSKRFAFRC 240 (342)
T ss_dssp EEECSC-S-----------SCEEEEEECSGGGCE-EEEEE-TT-----------SEEEEEECCT-TCCSTTCTTCEEEEC
T ss_pred eeecCC-C-----------CceeEEEECCCCCCE-EEEEe-cC-----------CcEEEEEEcC-CCcccccccceeeec
Confidence 111111 0 1245789999 9885 44332 11 2356666521 1 122233433
Q ss_pred ccc---------ccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 297 LDL---------RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 297 ~~~---------~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
... .+..+.|+||++.|+..+. ...|+++|+.++
T Consensus 241 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~vwd~~~~ 283 (342)
T 1yfq_A 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS----DGIISCWNLQTR 283 (342)
T ss_dssp CCCCTTCCSSCCCEEEEEECTTTCCEEEEET----TSCEEEEETTTT
T ss_pred ccccccccccceeEEEEEEcCCCCEEEEecC----CceEEEEcCccH
Confidence 332 7788999999998887652 224777787763
No 259
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.10 E-value=1.5e-08 Score=106.56 Aligned_cols=236 Identities=8% Similarity=0.035 Sum_probs=127.4
Q ss_pred ceEEEEcc-CC-CceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCC
Q 005240 157 AQLVLGSL-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDI 233 (706)
Q Consensus 157 ~~l~~~~l-~g-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~ 233 (706)
+.|.++++ ++ ....+... ..+..++|+|||++|+..+.+ ..+.+|++....... .....
T Consensus 88 ~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d-------------~~v~iw~~~~~~~~~-----~~~~~ 149 (380)
T 3iz6_a 88 GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD-------------SACSIFNLSSQADRD-----GNMPV 149 (380)
T ss_dssp SEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS-------------SCCEEEECCCCSSCC-----CSSTT
T ss_pred CeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC-------------CcEEEEECCCCcccc-----CCccc
Confidence 56777888 55 33444433 567789999999999765433 368889886432110 00000
Q ss_pred CcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEe------ecccccccceec
Q 005240 234 PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH------KLDLRFRSVSWC 307 (706)
Q Consensus 234 p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~------~~~~~~~~~~ws 307 (706)
...+......+..+.|+|++...|+-. . .+ ..|.+||+ .+++..... .+...+..+.|+
T Consensus 150 ~~~~~gh~~~v~~~~~~~~~~~~l~s~-s---~D--------~~i~~wd~---~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 150 SRVLTGHKGYASSCQYVPDQETRLITG-S---GD--------QTCVLWDV---TTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp CCBCCCCSSCCCCCBCCSSSSSCEEEE-C---TT--------SCEEEECT---TTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred eeeccCCCcceEEEEEecCCCCEEEEE-C---CC--------CcEEEEEc---CCCcEEEEeecccCCCCccCeEEEEee
Confidence 000000011234678999876524422 1 11 24778888 555443322 234456677887
Q ss_pred C-CCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecC
Q 005240 308 D-DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGR 386 (706)
Q Consensus 308 p-Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 386 (706)
+ ++..|+..+. ++. |.++|+.... +....+...-. ....+.|+|||++|+....+
T Consensus 215 ~~~~~~l~sgs~--D~~--v~~wd~~~~~-~~~~~~~~h~~------~v~~v~~~p~~~~l~s~s~D------------- 270 (380)
T 3iz6_a 215 SLNANMFISGSC--DTT--VRLWDLRITS-RAVRTYHGHEG------DINSVKFFPDGQRFGTGSDD------------- 270 (380)
T ss_dssp SSSCCEEEEEET--TSC--EEEEETTTTC-CCCEEECCCSS------CCCEEEECTTSSEEEEECSS-------------
T ss_pred cCCCCEEEEEEC--CCe--EEEEECCCCC-cceEEECCcCC------CeEEEEEecCCCeEEEEcCC-------------
Confidence 6 6777776542 233 4555654321 22222222111 23347899999988765421
Q ss_pred CCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCcee
Q 005240 387 GFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (706)
Q Consensus 387 g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~ 465 (706)
..+..+|+.+++....+..... ...........+.|||||+.|+....+ ..|++||+.+++..
T Consensus 271 --------~~i~lwd~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~~g~~d----g~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 271 --------GTCRLFDMRTGHQLQVYNREPD----RNDNELPIVTSVAFSISGRLLFAGYSN----GDCYVWDTLLAEMV 333 (380)
T ss_dssp --------SCEEEEETTTTEEEEEECCCCS----SSCCSSCSCSEEEECSSSSEEEEECTT----SCEEEEETTTCCEE
T ss_pred --------CeEEEEECCCCcEEEEeccccc----ccccccCceEEEEECCCCCEEEEEECC----CCEEEEECCCCceE
Confidence 1366678877765554433211 000000112357899999877765433 35999998776543
No 260
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.09 E-value=8.6e-10 Score=108.74 Aligned_cols=101 Identities=9% Similarity=-0.030 Sum_probs=72.2
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc---hhhHHHHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAV 590 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~D~~~~~ 590 (706)
|.||++||.+.. ...+ ......|+++||.|+..+.+ |+|.+... ........+|+.+.+
T Consensus 5 ~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~g~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~l~~~l 66 (258)
T 3dqz_A 5 HHFVLVHNAYHG-----------AWIW----YKLKPLLESAGHRVTAVELA---ASGIDPRPIQAVETVDEYSKPLIETL 66 (258)
T ss_dssp CEEEEECCTTCC-----------GGGG----TTHHHHHHHTTCEEEEECCT---TSTTCSSCGGGCCSHHHHHHHHHHHH
T ss_pred CcEEEECCCCCc-----------cccH----HHHHHHHHhCCCEEEEecCC---CCcCCCCCCCccccHHHhHHHHHHHH
Confidence 789999997421 1112 14567788899999996665 55655432 123455566666655
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
+.+ + + ..++.++|||+||++++.++.++|++++++|..++..
T Consensus 67 ~~l---~-~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 108 (258)
T 3dqz_A 67 KSL---P-E-NEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFL 108 (258)
T ss_dssp HTS---C-T-TCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCC
T ss_pred HHh---c-c-cCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCC
Confidence 544 1 1 3789999999999999999999999999999888743
No 261
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.09 E-value=2.7e-09 Score=108.53 Aligned_cols=123 Identities=11% Similarity=0.025 Sum_probs=80.7
Q ss_pred EEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcC
Q 005240 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (706)
Q Consensus 483 ~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 562 (706)
+...+.. ++..+..+..-|++ .|+||++||.+.. ...+. ..+..|++ ||.|+..+
T Consensus 46 ~~~~v~~-~~~~~~~~~~g~~~--------~~~vv~lHG~~~~-----------~~~~~----~~~~~L~~-g~~vi~~D 100 (306)
T 2r11_A 46 KSFYIST-RFGQTHVIASGPED--------APPLVLLHGALFS-----------STMWY----PNIADWSS-KYRTYAVD 100 (306)
T ss_dssp EEEEECC-TTEEEEEEEESCTT--------SCEEEEECCTTTC-----------GGGGT----TTHHHHHH-HSEEEEEC
T ss_pred ceEEEec-CCceEEEEeeCCCC--------CCeEEEECCCCCC-----------HHHHH----HHHHHHhc-CCEEEEec
Confidence 3444444 45567766643321 3679999997521 11121 23556666 99999977
Q ss_pred CCCcCCCCCCCC--chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 563 SIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 563 ~~~~~g~g~~~~--~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
.+|.. |.+.. .........+|+.++++.+ +.+++.++|+|+||++++.++.++|++++++|+.+|...
T Consensus 101 ~~G~g--G~s~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (306)
T 2r11_A 101 IIGDK--NKSIPENVSGTRTDYANWLLDVFDNL------GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAET 170 (306)
T ss_dssp CTTSS--SSCEECSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSB
T ss_pred CCCCC--CCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccc
Confidence 76432 33322 1223455566666665544 346899999999999999999999999999999998653
No 262
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=4e-08 Score=103.33 Aligned_cols=308 Identities=13% Similarity=0.083 Sum_probs=162.8
Q ss_pred CCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecC-CCCCCCCCCCC
Q 005240 40 PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPS-SRRDPPKKTMV 118 (706)
Q Consensus 40 PDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~-~~~~~~~~~~~ 118 (706)
||++++ |+.+.. .......|.++|+++++...-...... . .+.+||||++||+.... .+..
T Consensus 82 ~~~~~v-yV~n~~----~~~~~~~VsVID~~t~~vv~~I~vG~~-----P-gia~SpDgk~lyVan~~~~~~~------- 143 (426)
T 3c75_H 82 PDARRV-YIQDPA----HFAAITQQFVIDGSTGRILGMTDGGFL-----P-HPVAAEDGSFFAQASTVFERIA------- 143 (426)
T ss_dssp CCTTEE-EEEECT----TTCSSEEEEEEETTTTEEEEEEEECSS-----C-EEEECTTSSCEEEEEEEEEETT-------
T ss_pred CCCCEE-EEECCC----cCCCCCeEEEEECCCCEEEEEEECCCC-----C-ceEECCCCCEEEEEeccccccc-------
Confidence 788886 555410 000117999999998876543322221 4 78999999998876310 0000
Q ss_pred CCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc-eecCC--------CceEeeeeeCCCCcE
Q 005240 119 PLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGT--------PAVYTAVEPSPDQKY 188 (706)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~-~~lt~--------~~~~~~~~~SpDG~~ 188 (706)
.......|.++|. +++. ..+.- +.....+.+||||++
T Consensus 144 ---------------------------------~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~ 190 (426)
T 3c75_H 144 ---------------------------------RGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKN 190 (426)
T ss_dssp ---------------------------------EEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSE
T ss_pred ---------------------------------cCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCE
Confidence 0001257888898 5543 23321 124568899999999
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCC-CcceeeecCCCceEEEEEeccCCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREG-MRSISWRADKPSTLYWVEAQDRGD 267 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g-~~~~~~spdg~~~l~~~~~~~~~~ 267 (706)
|++..... ...|.++|+.+.++..-....+. ....+ .+ ...+.+++||+ ++++.. ..+.
T Consensus 191 lyV~n~~~-----------~~~VsVID~~t~kvv~~I~v~g~---~~~~p---~g~~~~v~~~~dG~--~~~V~~-~~~~ 250 (426)
T 3c75_H 191 LLFYQFSP-----------APAVGVVDLEGKTFDRMLDVPDC---YHIFP---ASPTVFYMNCRDGS--LARVDF-ADGE 250 (426)
T ss_dssp EEEEECSS-----------SCEEEEEETTTTEEEEEEECCSE---EEEEE---EETTEEEEEETTSS--EEEEEC-CTTC
T ss_pred EEEEecCC-----------CCeEEEEECCCCeEEEEEEcCCc---eeecc---CCCcEEEEEcCCCC--EEEEEC-CCCc
Confidence 98775431 24799999997665432222111 00000 11 11356777776 444432 2111
Q ss_pred CccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCc--
Q 005240 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRV-- 345 (706)
Q Consensus 268 ~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-- 345 (706)
.... . . ..+++ . .......+.+++|+..+++... ...++.+|..+.. ...+....
T Consensus 251 v~~~--~--~-~~~~v---~---------~~p~~~~~~~~~dg~~~~~~s~----~g~V~ViD~~~~~--~~v~~~~~~~ 307 (426)
T 3c75_H 251 TKVT--N--T-EVFHT---E---------DELLINHPAFSLRSGRLVWPTY----TGKIFQADLTAEG--ATFRAPIEAL 307 (426)
T ss_dssp CEEE--E--C-CCCSC---T---------TSCBCSCCEECTTTCEEEEEBT----TSEEEEEEECSSC--EEECCCEESS
T ss_pred EEEE--e--e-eeecc---C---------CCceeeEeeecCCCCEEEEEeC----CCcEEEEeccCCc--eEEeeeeeec
Confidence 1000 0 0 01111 0 0112234568999998888752 2369999987642 22211100
Q ss_pred ---ccccccCCC-CCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhh
Q 005240 346 ---FENVYSDPG-SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 421 (706)
Q Consensus 346 ---~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 421 (706)
.......|+ ...+.++|||+++++..... ..|.+. .....|..+|+++++..+-+.....
T Consensus 308 ~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~----------~~gthk-~~s~~VsVID~~T~kvv~~I~vg~~----- 371 (426)
T 3c75_H 308 TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQR----------DEWKHK-AASRFVVVLNAETGERINKIELGHE----- 371 (426)
T ss_dssp CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEEC----------CTTCTT-SCEEEEEEEETTTCCEEEEEEEEEE-----
T ss_pred cccccccccccCCceeeEEcCCCCEEEEEeccc----------cccccc-CCCCEEEEEECCCCeEEEEEECCCC-----
Confidence 001111222 12356788888887764210 000000 0123588899999887655543321
Q ss_pred hhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeE
Q 005240 422 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (706)
Q Consensus 422 ~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~ 466 (706)
-+.+.|+|||+.++|+.... -..|.++|++++++.+
T Consensus 372 -------P~gia~spDg~~~lyv~n~~--s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 372 -------IDSINVSQDAEPLLYALSAG--TQTLHIYDAATGEELR 407 (426)
T ss_dssp -------ECEEEECCSSSCEEEEEETT--TTEEEEEETTTCCEEE
T ss_pred -------cCeEEEccCCCEEEEEEcCC--CCeEEEEECCCCCEEE
Confidence 12468999999555554432 3569999999887653
No 263
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.08 E-value=1.6e-08 Score=110.66 Aligned_cols=215 Identities=7% Similarity=0.032 Sum_probs=126.1
Q ss_pred cceeEeecCCCCCCCCee-----eeecCCCCCcccceeeCCC------CCeEEEEeeccccccccCCceeEEEEEcCCCc
Q 005240 5 TGIGIHRLLPDDSLGPEK-----EVHGYPDGAKINFVSWSPD------GKRIAFSVRVDEEDNVSSCKLRVWIADAETGE 73 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~-----~i~~~~~~~~~~~~~~SPD------G~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~ 73 (706)
..|.|.+++. ++.. .+.+.. ..+..++|||+ |+.||..+. ++ .|.++++.+++
T Consensus 183 ~tI~iWd~~~----~~~~~~~~~~l~~~~--~~V~~v~wsp~~~~~~~~~~LAs~s~--------Dg--tvrlWd~~~~~ 246 (524)
T 2j04_B 183 SCIQIFKMNT----STLHCVKVQTIVHSF--GEVWDLKWHEGCHAPHLVGCLSFVSQ--------EG--TINFLEIIDNA 246 (524)
T ss_dssp EEEEEEEEET----TTCCEEEEEEEEECC--CSEEEEEECSSCCCSSSSCEEEEEET--------TS--CEEEEECCCCS
T ss_pred ceEEEEEccC----CCCCceEEEEEEecC--CcEEEEEECCCCCCCCCCceEEEEec--------CC--eEEEEEcCCCc
Confidence 3578889876 5431 123211 24788999997 567776543 33 45556666553
Q ss_pred ee------------ecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhc
Q 005240 74 AK------------PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (706)
Q Consensus 74 ~~------------~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (706)
.. .+.... ..+..+.|+|++ .|+..+.
T Consensus 247 ~~~~~~~~~~~p~~~l~~h~-----~~v~sv~~s~~~-~lasgs~----------------------------------- 285 (524)
T 2j04_B 247 TDVHVFKMCEKPSLTLSLAD-----SLITTFDFLSPT-TVVCGFK----------------------------------- 285 (524)
T ss_dssp SSSSEEECCCSCSEEECCTT-----TCEEEEEESSSS-EEEEEET-----------------------------------
T ss_pred cccccceeecCceEEEEcCC-----CCEEEEEecCCC-eEEEEeC-----------------------------------
Confidence 21 111111 236789999876 5665532
Q ss_pred cCCchhhhhhhhcccceEEEEccC-C-Cce-ecCCC-ceEeee--eeCCCC-cEEEEEeeccCcccccccccccceEEEE
Q 005240 142 LKDEYDESLFDYYTTAQLVLGSLD-G-TAK-DFGTP-AVYTAV--EPSPDQ-KYVLITSMHRPYSYKVPCARFSQKVQVW 214 (706)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~~l~-g-~~~-~lt~~-~~~~~~--~~SpDG-~~i~~~~~~~~~~~~~~~~~~~~~i~~~ 214 (706)
.+.|.++|+. + .+. .+... ..+..+ .|+|+| +.|+-.+.+ ..|.+|
T Consensus 286 --------------DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D-------------~tvklW 338 (524)
T 2j04_B 286 --------------NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD-------------GYFYIF 338 (524)
T ss_dssp --------------TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT-------------SEEEEE
T ss_pred --------------CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC-------------CeEEEE
Confidence 1578888884 5 333 23333 567777 689998 555544433 379999
Q ss_pred ecCCCe-eEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceE
Q 005240 215 TTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI 293 (706)
Q Consensus 215 ~~~~~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 293 (706)
|+...+ .+.+...... ..+..++|+||++. ++.. . .+ +.+.++|+. .+.....
T Consensus 339 D~~~~~~~~~~~~~~~~-----------~~v~~v~fsp~~~~-l~s~-~---~d--------~tv~lwd~~--~~~~~~~ 392 (524)
T 2j04_B 339 NPKDIATTKTTVSRFRG-----------SNLVPVVYCPQIYS-YIYS-D---GA--------SSLRAVPSR--AAFAVHP 392 (524)
T ss_dssp CGGGHHHHCEEEEECSC-----------CSCCCEEEETTTTE-EEEE-C---SS--------SEEEEEETT--CTTCCEE
T ss_pred ECCCCCccccccccccc-----------CcccceEeCCCcCe-EEEe-C---CC--------CcEEEEECc--cccccee
Confidence 997543 2222211100 01346799999985 4322 1 11 247788872 2333466
Q ss_pred EeecccccccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 294 LHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 294 l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
+..+...+..++|||||+.|+..+.+ + .|.++|+..
T Consensus 393 l~gH~~~V~sva~Sp~g~~l~Sgs~D--g--tv~lwd~~~ 428 (524)
T 2j04_B 393 LVSRETTITAIGVSRLHPMVLAGSAD--G--SLIITNAAR 428 (524)
T ss_dssp EEECSSCEEEEECCSSCCBCEEEETT--T--EEECCBSCS
T ss_pred eecCCCceEEEEeCCCCCeEEEEECC--C--EEEEEechH
Confidence 77778889999999999988876522 3 355556544
No 264
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.08 E-value=1.8e-09 Score=107.74 Aligned_cols=122 Identities=14% Similarity=0.105 Sum_probs=85.4
Q ss_pred EEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCC
Q 005240 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 563 (706)
Q Consensus 484 ~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 563 (706)
...+. .+|..+....+.|++ .|+||++||.+.. ... ....+..|++.||.|+..+.
T Consensus 6 ~~~~~-~~g~~l~~~~~g~~~--------~~~vv~~hG~~~~-----------~~~----~~~~~~~l~~~G~~v~~~d~ 61 (286)
T 3qit_A 6 EKFLE-FGGNQICLCSWGSPE--------HPVVLCIHGILEQ-----------GLA----WQEVALPLAAQGYRVVAPDL 61 (286)
T ss_dssp EEEEE-ETTEEEEEEEESCTT--------SCEEEEECCTTCC-----------GGG----GHHHHHHHHHTTCEEEEECC
T ss_pred hheee-cCCceEEEeecCCCC--------CCEEEEECCCCcc-----------cch----HHHHHHHhhhcCeEEEEECC
Confidence 33444 378899998886532 3789999997421 011 12456778899999999666
Q ss_pred CCcCCCCCCCCc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 564 IPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 564 ~~~~g~g~~~~~----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
+ |+|.+... ........+|+..+++.+ +..++.++|||+||++++.++.++|++++++|+.++...
T Consensus 62 ~---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 131 (286)
T 3qit_A 62 F---GHGRSSHLEMVTSYSSLTFLAQIDRVIQEL------PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLP 131 (286)
T ss_dssp T---TSTTSCCCSSGGGCSHHHHHHHHHHHHHHS------CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred C---CCCCCCCCCCCCCcCHHHHHHHHHHHHHhc------CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCC
Confidence 5 44544332 122345555655555543 347899999999999999999999999999999998654
No 265
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.08 E-value=2.2e-10 Score=114.34 Aligned_cols=119 Identities=12% Similarity=0.099 Sum_probs=74.3
Q ss_pred eEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEc
Q 005240 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (706)
Q Consensus 482 ~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (706)
.+...++..+| .+..+...+ +-|+||++||.+.. ...+ ......|++.||.|+..
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~---------~~~~vv~lHG~~~~-----------~~~~----~~~~~~l~~~g~~v~~~ 57 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRESEG---------EGAPLLMIHGNSSS-----------GAIF----APQLEGEIGKKWRVIAP 57 (279)
T ss_dssp CEEEEEEETTE-EEEEEECCC---------CEEEEEEECCTTCC-----------GGGG----HHHHHSHHHHHEEEEEE
T ss_pred eEEEEEEcCCc-eEEEEecCC---------CCCeEEEECCCCCc-----------hhHH----HHHHhHHHhcCCeEEee
Confidence 34555665454 454333211 24789999997421 1111 13345557789999996
Q ss_pred CCCCcCCCCCCCCc-----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 562 PSIPIIGEGDKLPN-----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 562 ~~~~~~g~g~~~~~-----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
+.+ |+|.+... ........+|+.++++.+ +.+++.++|||+||.+++.++.++|+ +.+++..++
T Consensus 58 d~~---G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~ 126 (279)
T 4g9e_A 58 DLP---GHGKSTDAIDPDRSYSMEGYADAMTEVMQQL------GIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGT 126 (279)
T ss_dssp CCT---TSTTSCCCSCHHHHSSHHHHHHHHHHHHHHH------TCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESC
T ss_pred cCC---CCCCCCCCCCcccCCCHHHHHHHHHHHHHHh------CCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecC
Confidence 665 55555432 112345566666665554 34689999999999999999999998 555555554
No 266
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.08 E-value=2.8e-08 Score=100.50 Aligned_cols=228 Identities=14% Similarity=0.106 Sum_probs=129.5
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCce---eecccCCCccccccccceEEecC--CcEEEEEec
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA---KPLFESPDICLNAVFGSFVWVNN--STLLIFTIP 106 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~---~~lt~~~~~~~~~~~~~~~wSpD--g~~l~~~~~ 106 (706)
.+..++|||||++||..+. + ..|.+++++++.. ..+..+.. .+..+.|+|+ |++|+..+.
T Consensus 11 ~V~~~~~s~~g~~las~s~--------D--~~v~iw~~~~~~~~~~~~l~gH~~-----~V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSS--------D--KTIKIFEVEGETHKLIDTLTGHEG-----PVWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp CEEEEEECTTSSEEEEEET--------T--SCEEEEEBCSSCBCCCEEECCCSS-----CEEEEEECCGGGCSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEeC--------C--CEEEEEecCCCCcEEEEEEccccC-----CeEEEEecCCCcCCEEEEEcC
Confidence 4778999999999988653 3 3455566654322 22322222 3778899864 888776642
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc---eecCCC-ceEeeee
Q 005240 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA---KDFGTP-AVYTAVE 181 (706)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~---~~lt~~-~~~~~~~ 181 (706)
+ +.|.++++ +++. ..+... ..+..++
T Consensus 76 D-------------------------------------------------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~ 106 (297)
T 2pm7_B 76 D-------------------------------------------------GKVMIWKEENGRWSQIAVHAVHSASVNSVQ 106 (297)
T ss_dssp T-------------------------------------------------TEEEEEEBSSSCBCCCEEECCCSSCEEEEE
T ss_pred C-------------------------------------------------CEEEEEEcCCCceEEEEEeecCCCceeEEE
Confidence 1 56777787 4432 223323 5788999
Q ss_pred eCCC--CcEEEEEeeccCcccccccccccceEEEEecCCCe---eEEcccCCCCCCCCcccCccCCCCcceeeecCCC--
Q 005240 182 PSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL---VRELCDLPPAEDIPVCYNSVREGMRSISWRADKP-- 254 (706)
Q Consensus 182 ~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~-- 254 (706)
|+|+ |+.|+..+.+ ..|.+|++.... ...+.... ..+..+.|+|++.
T Consensus 107 ~~p~~~g~~l~s~s~d-------------~~v~~wd~~~~~~~~~~~~~~h~-------------~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 107 WAPHEYGPMLLVASSD-------------GKVSVVEFKENGTTSPIIIDAHA-------------IGVNSASWAPATIEE 160 (297)
T ss_dssp ECCGGGCSEEEEEETT-------------SEEEEEEBCSSSCBCCEEEECCS-------------SCEEEEEECCCC---
T ss_pred eCcCCCCcEEEEEECC-------------CcEEEEEecCCCceeeeeeeccc-------------CccceEeecCCcccc
Confidence 9998 7777755443 378999987542 11221111 2244778999741
Q ss_pred ----------ceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-----eEEeecccccccceecCCC---ceEEEE
Q 005240 255 ----------STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-----EILHKLDLRFRSVSWCDDS---LALVNE 316 (706)
Q Consensus 255 ----------~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-----~~l~~~~~~~~~~~wspDg---~~l~~~ 316 (706)
..|+ .... ...|.+||+ ..++. ..+..+...+..++|+|++ ..|+..
T Consensus 161 ~~~~~~~~~~~~l~-sgs~-----------D~~v~lwd~---~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 161 DGEHNGTKESRKFV-TGGA-----------DNLVKIWKY---NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp ---------CCEEE-EEET-----------TSCEEEEEE---ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred cccCCCCCCcceEE-EEcC-----------CCcEEEEEE---cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence 2133 2111 124777777 33331 2344556778899999995 666655
Q ss_pred eeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 317 TWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 317 ~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
+ .++..+||.++..........+...... .....++|+|||++|+...
T Consensus 226 s--~D~~v~iWd~~~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 226 S--QDRTCIIWTQDNEQGPWKKTLLKEEKFP-----DVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp E--TTSCEEEEEESSTTSCCEEEESSSSCCS-----SCEEEEEECSSSCCEEEEE
T ss_pred E--CCCcEEEEEeCCCCCccceeeeecccCC-----CcEEEEEECCCCCEEEEEc
Confidence 4 2345667766533211011111101110 0122477999999887664
No 267
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.08 E-value=2.1e-09 Score=101.30 Aligned_cols=150 Identities=12% Similarity=-0.023 Sum_probs=94.1
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCch-HHHHHHHC-CeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPT-SSLIFLAR-RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 590 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~-G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~ 590 (706)
.|+||++||.+.. .. .. ..... ....|+++ ||.|+.++.+|... . +....+
T Consensus 4 ~p~vv~lHG~~~~----------~~-~~-~~~~~~~~~~l~~~~g~~vi~~d~~g~~~---~------------~~~~~~ 56 (194)
T 2qs9_A 4 PSKAVIVPGNGGG----------DV-TT-HGWYGWVKKELEKIPGFQCLAKNMPDPIT---A------------RESIWL 56 (194)
T ss_dssp CCEEEEECCSSSS----------CT-TT-STTHHHHHHHHTTSTTCCEEECCCSSTTT---C------------CHHHHH
T ss_pred CCEEEEECCCCCC----------Cc-cc-chHHHHHHHHHhhccCceEEEeeCCCCCc---c------------cHHHHH
Confidence 5889999997421 00 00 01112 45567777 99999987764311 0 111223
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC-----------CCccc-------------
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL-----------TPFGF------------- 646 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~-----------~~~~~------------- 646 (706)
+.+.+.-.+ ..++.++|||+||++++.++.++| ++++++.+|...... .+..+
T Consensus 57 ~~~~~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii 133 (194)
T 2qs9_A 57 PFMETELHC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDENERASGYFTRPWQWEKIKANCPYIVQF 133 (194)
T ss_dssp HHHHHTSCC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHHHHHTSTTSSCCCHHHHHHHCSEEEEE
T ss_pred HHHHHHhCc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhhhHHHhhhcccccHHHHHhhCCCEEEE
Confidence 334443112 379999999999999999999998 999999998654210 01000
Q ss_pred -----------hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhccCC
Q 005240 647 -----------QAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLSNT 699 (706)
Q Consensus 647 -----------~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~~~ 699 (706)
..+++.+.+ ..+++++|+++|.+.. ...+.+.++++||++...++.
T Consensus 134 ~G~~D~~vp~~~~~~~~~~~-----~~~~~~~~~~gH~~~~--~~p~~~~~~~~fl~~~~~~~~ 190 (194)
T 2qs9_A 134 GSTDDPFLPWKEQQEVADRL-----ETKLHKFTDCGHFQNT--EFHELITVVKSLLKVPALEHH 190 (194)
T ss_dssp EETTCSSSCHHHHHHHHHHH-----TCEEEEESSCTTSCSS--CCHHHHHHHHHHHTCCCCCCC
T ss_pred EeCCCCcCCHHHHHHHHHhc-----CCeEEEeCCCCCccch--hCHHHHHHHHHHHHhhhhhhh
Confidence 112444444 3589999999998763 234566778899998765544
No 268
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.07 E-value=2.7e-08 Score=106.46 Aligned_cols=200 Identities=11% Similarity=0.097 Sum_probs=117.7
Q ss_pred CCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCC----------Cc-eeecccCCCccccccccceEEecC
Q 005240 29 DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET----------GE-AKPLFESPDICLNAVFGSFVWVNN 97 (706)
Q Consensus 29 ~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~----------g~-~~~lt~~~~~~~~~~~~~~~wSpD 97 (706)
....+..++|+|++..++++.. ....|.++++.. .+ ...+..+.. .+..+.|+|+
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~---------~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~~~~ 192 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKT---------PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK-----EGYGLSWNPN 192 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEEC---------SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS-----CCCCEEECTT
T ss_pred CCCcEEEEEECCCCCcEEEEEC---------CCCcEEEEECCCcccccCccccCCCcEEecCCCC-----CeEEEEeCCC
Confidence 3346889999998554444432 224577777764 11 122222222 2678999999
Q ss_pred Cc-EEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC-C-------
Q 005240 98 ST-LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-T------- 167 (706)
Q Consensus 98 g~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g-~------- 167 (706)
++ .|+.... .+.|.++++ .+ .
T Consensus 193 ~~~~l~s~~~-------------------------------------------------dg~i~vwd~~~~~~~~~~~~~ 223 (430)
T 2xyi_A 193 LNGYLLSASD-------------------------------------------------DHTICLWDINATPKEHRVIDA 223 (430)
T ss_dssp STTEEEEECT-------------------------------------------------TSCEEEEETTSCCBGGGEEEC
T ss_pred CCCeEEEEeC-------------------------------------------------CCeEEEEeCCCCCCCCceecc
Confidence 98 7665532 145667777 32 1
Q ss_pred ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCe----eEEcccCCCCCCCCcccCccCC
Q 005240 168 AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL----VRELCDLPPAEDIPVCYNSVRE 242 (706)
Q Consensus 168 ~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l~~~~~~~~~p~~~~~~~~ 242 (706)
...+... ..+..++|+|++..++++.... ..|.+|++..+. ...+.... .
T Consensus 224 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~-------------~ 278 (430)
T 2xyi_A 224 KNIFTGHTAVVEDVAWHLLHESLFGSVADD------------QKLMIWDTRNNNTSKPSHTVDAHT-------------A 278 (430)
T ss_dssp SEEECCCSSCEEEEEECSSCTTEEEEEETT------------SEEEEEETTCSCSSSCSEEEECCS-------------S
T ss_pred ceeecCCCCCEeeeEEeCCCCCEEEEEeCC------------CeEEEEECCCCCCCcceeEeecCC-------------C
Confidence 1222223 5788999999665555554432 479999998542 22221111 2
Q ss_pred CCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC-ceEEeecccccccceecCCCceEEEEeeccc
Q 005240 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNETWYKT 321 (706)
Q Consensus 243 g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~ 321 (706)
.+..++|+|+++. ++.+...+ +.|.+||+. ..+. ...+..+...+..+.|+|+++.++++...+
T Consensus 279 ~v~~i~~~p~~~~-~l~tg~~d-----------g~v~vwd~~--~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d- 343 (430)
T 2xyi_A 279 EVNCLSFNPYSEF-ILATGSAD-----------KTVALWDLR--NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD- 343 (430)
T ss_dssp CEEEEEECSSCTT-EEEEEETT-----------SEEEEEETT--CTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-
T ss_pred CeEEEEeCCCCCC-EEEEEeCC-----------CeEEEEeCC--CCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC-
Confidence 3558899999987 44343221 247888883 2123 445556678889999999997755544333
Q ss_pred cceEEEEEcC
Q 005240 322 SQTRTWLVCP 331 (706)
Q Consensus 322 ~~~~l~~~d~ 331 (706)
+...||.+..
T Consensus 344 ~~i~iwd~~~ 353 (430)
T 2xyi_A 344 RRLHVWDLSK 353 (430)
T ss_dssp SCCEEEEGGG
T ss_pred CcEEEEeCCC
Confidence 4445555543
No 269
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.07 E-value=5.3e-08 Score=101.49 Aligned_cols=313 Identities=9% Similarity=-0.001 Sum_probs=155.5
Q ss_pred CCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCC
Q 005240 40 PDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVP 119 (706)
Q Consensus 40 PDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~ 119 (706)
||++++ |+.+.. .+......|+++|.++++......... .. .+++||||++||..........
T Consensus 13 ~~~~~~-yv~~~~---~~~~~d~~v~v~D~~t~~~~~~i~~g~-----~p-~i~~spdg~~lyv~~~~~~~~~------- 75 (361)
T 2oiz_A 13 PQENRI-YVMDSV---FMHLTESRVHVYDYTNGKFLGMVPTAF-----NG-HVQVSNDGKKIYTMTTYHERIT------- 75 (361)
T ss_dssp CGGGEE-EEEECC---GGGGGGCEEEEEETTTCCEEEEEECCE-----EE-EEEECTTSSEEEEEEEEETTSS-------
T ss_pred CCCCEE-EEECCC---CCccccCeEEEEECCCCeEEEEecCCC-----CC-ceEECCCCCEEEEEEecccccc-------
Confidence 578776 555410 000123589999998887654322211 24 7899999999887632100000
Q ss_pred CCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCc-eecCC-------CceEeeeeeCCCCcEEE
Q 005240 120 LGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTA-KDFGT-------PAVYTAVEPSPDQKYVL 190 (706)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~-~~lt~-------~~~~~~~~~SpDG~~i~ 190 (706)
.+ .....|.++|+ +++. ..+.. +.....+++||||++|+
T Consensus 76 ~g--------------------------------~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 76 RG--------------------------------KRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp SS--------------------------------CEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred cC--------------------------------CCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 00 01246778887 4433 22321 12456789999999998
Q ss_pred EEeeccCcccccccccccceEEEEecCCCeeEEc-ccCCCCCCCCcccCccCCC-CcceeeecCCCceEEEEEeccCCCC
Q 005240 191 ITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREG-MRSISWRADKPSTLYWVEAQDRGDA 268 (706)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~~~~~p~~~~~~~~g-~~~~~~spdg~~~l~~~~~~~~~~~ 268 (706)
...... ...|.+||+++.+...- ....+... ...++ .+ ...+..++||+. +++. ....+..
T Consensus 124 v~n~~~-----------~~~v~v~d~~~~~~~~~~i~~~~~~~-v~~~p---~~~~~~~~~~~dg~~-~~v~-~~~~g~~ 186 (361)
T 2oiz_A 124 LQNASP-----------ATSIGIVDVAKGDYVEDVTAAAGCWS-VIPQP---NRPRSFMTICGDGGL-LTIN-LGEDGKV 186 (361)
T ss_dssp EEEESS-----------SEEEEEEETTTTEEEEEEGGGTTEEE-EEECT---TSSSEEEEEETTSSE-EEEE-ECTTSSE
T ss_pred EECCCC-----------CCeEEEEECCCCcEEEEEecCCCcce-eEEcC---CCCeeEEEECCCCcE-EEEE-ECCCCcE
Confidence 765431 24799999997654332 22211100 00000 11 123456666653 2222 1111110
Q ss_pred ccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcc--
Q 005240 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVF-- 346 (706)
Q Consensus 269 ~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-- 346 (706)
+..... ..+............++|+..+++.+ . ...++.+|+.+.+ ...+.....
T Consensus 187 ---------~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~~-~---~~~v~v~d~~~~~--~~~~~~~~~~~ 243 (361)
T 2oiz_A 187 ---------ASQSRS--------KQMFSVKDDPIFIAPALDKDKAHFVS-Y---YGNVYSADFSGDE--VKVDGPWSLLN 243 (361)
T ss_dssp ---------EEEEEC--------CCCSCTTTSCBCSCCEECSSEEEEEB-T---TSEEEEEECSSSS--CEEEEEEESCC
T ss_pred ---------eeeccc--------cceEcCCCCceEEEecccCCEEEEEe-C---CCeEEEEEecCCC--ceecccccccC
Confidence 000000 00001111112334578887777764 2 2359999987642 222210000
Q ss_pred ---cccccCCC-CCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhh
Q 005240 347 ---ENVYSDPG-SPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETA 422 (706)
Q Consensus 347 ---~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 422 (706)
......|. ...++++|||++++.....++. .+... .....++.+|+++++..+-+...
T Consensus 244 ~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~---------~~~~~-~~~~~v~viD~~t~~~v~~i~~~-------- 305 (361)
T 2oiz_A 244 DEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGK---------EGTHK-FPAAEIWVMDTKTKQRVARIPGR-------- 305 (361)
T ss_dssp HHHHHTTCEECCSSCEEEETTTTEEEEEEESSCC---------TTCTT-CCCSEEEEEETTTTEEEEEEECT--------
T ss_pred ccccccccccCCeeEEEEecCCCeEEEEEccCCC---------ccccc-CCCceEEEEECCCCcEEEEEecC--------
Confidence 00111122 2235678888887765421000 01000 11236888999988765443321
Q ss_pred hhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeEeec
Q 005240 423 VALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQITN 469 (706)
Q Consensus 423 ~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~lt~ 469 (706)
. ...+.|||||++|+ +.+. ..|.++|+++++.+.+..
T Consensus 306 ----~-p~~ia~spdg~~l~-v~n~----~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 306 ----D-ALSMTIDQQRNLML-TLDG----GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp ----T-CCEEEEETTTTEEE-EECS----SCEEEEECSSSSCEEEEE
T ss_pred ----C-eeEEEECCCCCEEE-EeCC----CeEEEEECCCCcceeeEE
Confidence 1 23578999999555 4332 779999999985555544
No 270
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.07 E-value=7.5e-08 Score=97.86 Aligned_cols=252 Identities=12% Similarity=0.075 Sum_probs=150.9
Q ss_pred cceeEeecCCCCCCCCeeeeecCCC-CCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
.+|+|.|+.+ |+..++-.+.. ...+..++|||||++||.... ...|.++++++++..+......
T Consensus 45 ~tV~iWd~~t----g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~----------Dg~v~iw~~~~~~~~~~~~~h~- 109 (318)
T 4ggc_A 45 NSVYLWSASS----GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS----------SAEVQLWDVQQQKRLRNMTSHS- 109 (318)
T ss_dssp TEEEEEETTT----CCEEEEEECCSTTCCEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCS-
T ss_pred CEEEEEECCC----CCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC----------CCcEEEeecCCceeEEEecCcc-
Confidence 4589999987 87766543332 336889999999999987642 2567778988887655432222
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
.....++++++.|+..+.. ..+..++
T Consensus 110 -----~~~~~~~~~~~~l~s~~~~-------------------------------------------------~~~~~~~ 135 (318)
T 4ggc_A 110 -----ARVGSLSWNSYILSSGSRS-------------------------------------------------GHIHHHD 135 (318)
T ss_dssp -----SCEEEEEEETTEEEEEETT-------------------------------------------------SEEEEEE
T ss_pred -----ceEEEeecCCCEEEEEecC-------------------------------------------------CceEeee
Confidence 2344677888877765421 2344444
Q ss_pred c-CC-C-ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEE--cccCCCCCCCCccc
Q 005240 164 L-DG-T-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRE--LCDLPPAEDIPVCY 237 (706)
Q Consensus 164 l-~g-~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--l~~~~~~~~~p~~~ 237 (706)
. .+ . ...+... ..+....++++|+.|+..... ..|.+||+..++... +......
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~------- 195 (318)
T 4ggc_A 136 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------NLVNVWPSAPGEGGWVPLQTFTQH------- 195 (318)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESSCBTTBSCCSEEECCC-------
T ss_pred cCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC-------------cceeEEECCCCcccccceeeeccc-------
Confidence 4 22 2 2223333 567788999999998755543 378999987543211 1111000
Q ss_pred CccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEe
Q 005240 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNET 317 (706)
Q Consensus 238 ~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~ 317 (706)
...+..+.|+|++.. ++.+.. .. ....|.++|. ..............+....|+|++..++..+
T Consensus 196 ---~~~v~~~~~~~~~~~-~~~~~~-~~--------~~~~i~lwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 196 ---QGAVKAVAWCPWQSN-VLATGG-GT--------SDRHIRIWNV---CSGACLSAVDAHSQVCSILWSPHYKELISGH 259 (318)
T ss_dssp ---CSCEEEEEECTTSTT-EEEEEE-CT--------TTCEEEEEET---TTCCEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred ---CCceEEEEecCCCCc-EEEEEe-cC--------CCCEEEEEec---ccccccccccceeeeeeeeecccccceEEEE
Confidence 012346789999887 443321 11 1124677777 4455444555566778889999999888765
Q ss_pred eccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 318 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 318 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
...+ ..|+++|+.++ +....+...... ...++|+|||++|+...
T Consensus 260 g~~d--~~i~iwd~~~~--~~~~~l~gH~~~------V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 260 GFAQ--NQLVIWKYPTM--AKVAELKGHTSR------VLSLTMSPDGATVASAA 303 (318)
T ss_dssp CTTT--CCEEEEETTTC--CEEEEECCCSSC------EEEEEECTTSSCEEEEE
T ss_pred EcCC--CEEEEEECCCC--cEEEEEcCCCCC------EEEEEEcCCCCEEEEEe
Confidence 3332 34667787774 333333322111 23478999999887654
No 271
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.07 E-value=4.6e-10 Score=112.05 Aligned_cols=99 Identities=15% Similarity=0.107 Sum_probs=70.4
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCch----h--hHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND----R--FVEQLVSSAE 587 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~----~--~~~~~~~D~~ 587 (706)
|+||++||.+.. ...+. ..+..|++ ||.|+..+.+ |+|.+.... . ......+|+.
T Consensus 29 ~~vv~lHG~~~~-----------~~~~~----~~~~~l~~-g~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~~~ 89 (282)
T 3qvm_A 29 KTVLLAHGFGCD-----------QNMWR----FMLPELEK-QFTVIVFDYV---GSGQSDLESFSTKRYSSLEGYAKDVE 89 (282)
T ss_dssp CEEEEECCTTCC-----------GGGGT----TTHHHHHT-TSEEEECCCT---TSTTSCGGGCCTTGGGSHHHHHHHHH
T ss_pred CeEEEECCCCCC-----------cchHH----HHHHHHhc-CceEEEEecC---CCCCCCCCCCCccccccHHHHHHHHH
Confidence 789999996421 11121 23556666 9999996665 455553321 1 3455666666
Q ss_pred HHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 588 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 588 ~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
++++.+ +.+++.++|||+||.+++.++.++|++++++++.+|..
T Consensus 90 ~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 133 (282)
T 3qvm_A 90 EILVAL------DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSP 133 (282)
T ss_dssp HHHHHT------TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCS
T ss_pred HHHHHc------CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcc
Confidence 665554 34789999999999999999999999999999999864
No 272
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.07 E-value=3.2e-08 Score=102.81 Aligned_cols=113 Identities=14% Similarity=0.195 Sum_probs=78.0
Q ss_pred CcccceeeCCC---CCeEEEEeeccccccccCCceeEEEEEcCC-Ccee--ecccCCCccccccccceEEecCCcEEEEE
Q 005240 31 AKINFVSWSPD---GKRIAFSVRVDEEDNVSSCKLRVWIADAET-GEAK--PLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (706)
Q Consensus 31 ~~~~~~~~SPD---G~~laf~~~~~~~~~~~~~~~~l~~~d~~~-g~~~--~lt~~~~~~~~~~~~~~~wSpDg~~l~~~ 104 (706)
..+..++|||| |++|+.... + ..|.++++++ +... .+..+.. .+..+.|+|||++|+..
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~--------d--g~i~iw~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSW--------A--NDVRCWEVQDSGQTIPKAQQMHTG-----PVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEET--------T--SEEEEEEECTTSCEEEEEEEECSS-----CEEEEEECTTSSEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEECC--------C--CcEEEEEcCCCCceeEEEeccccC-----CEEEEEECcCCCEEEEE
Confidence 36889999999 588877542 3 4566667665 4332 2332232 27789999999998876
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCC-ceEeeeee
Q 005240 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP-AVYTAVEP 182 (706)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~-~~~~~~~~ 182 (706)
+. .+.|.++++ +++...+... ..+..+.|
T Consensus 105 ~~-------------------------------------------------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~ 135 (368)
T 3mmy_A 105 SC-------------------------------------------------DKTAKMWDLSSNQAIQIAQHDAPVKTIHW 135 (368)
T ss_dssp ET-------------------------------------------------TSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred cC-------------------------------------------------CCcEEEEEcCCCCceeeccccCceEEEEE
Confidence 42 157888888 4454444434 67889999
Q ss_pred --CCCCcEEEEEeeccCcccccccccccceEEEEecCCCe
Q 005240 183 --SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (706)
Q Consensus 183 --SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 220 (706)
+|+|+.|+..+.. ..|.+||+..++
T Consensus 136 ~~~~~~~~l~~~~~d-------------g~i~vwd~~~~~ 162 (368)
T 3mmy_A 136 IKAPNYSCVMTGSWD-------------KTLKFWDTRSSN 162 (368)
T ss_dssp EECSSCEEEEEEETT-------------SEEEEECSSCSS
T ss_pred EeCCCCCEEEEccCC-------------CcEEEEECCCCc
Confidence 9999988766543 379999998554
No 273
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.07 E-value=6.4e-09 Score=106.97 Aligned_cols=204 Identities=10% Similarity=0.070 Sum_probs=112.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCc--eeec---ccCCCccccccccceEEec--CCcEEEEE
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE--AKPL---FESPDICLNAVFGSFVWVN--NSTLLIFT 104 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l---t~~~~~~~~~~~~~~~wSp--Dg~~l~~~ 104 (706)
.+..++|||||++||.... + ..|.++++.++. .+.+ ..+.. .+..+.|+| |+++|+..
T Consensus 13 ~v~~~~~~~~~~~l~~~~~--------d--g~i~iw~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~d~~~l~s~ 77 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSS--------D--QHIKVFKLDKDTSNWELSDSWRAHDS-----SIVAIDWASPEYGRIIASA 77 (351)
T ss_dssp CEEEEEECSSSSEEEEEET--------T--SEEEEEEECSSSCCEEEEEEEECCSS-----CEEEEEECCGGGCSEEEEE
T ss_pred ceeEEEEcCCCCEEEEeeC--------C--CeEEEEECCCCCCcceecceeccCCC-----cEEEEEEcCCCCCCEEEEE
Confidence 4889999999999987653 3 356666665542 1222 22222 277899999 68888876
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC-CC----------ceecCC
Q 005240 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD-GT----------AKDFGT 173 (706)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~-g~----------~~~lt~ 173 (706)
+.+ +.|.++++. ++ ...+..
T Consensus 78 ~~d-------------------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~ 108 (351)
T 3f3f_A 78 SYD-------------------------------------------------KTVKLWEEDPDQEECSGRRWNKLCTLND 108 (351)
T ss_dssp ETT-------------------------------------------------SCEEEEEECTTSCTTSSCSEEEEEEECC
T ss_pred cCC-------------------------------------------------CeEEEEecCCCcccccccCcceeeeecc
Confidence 431 456666662 21 222333
Q ss_pred C-ceEeeeeeCCC--CcEEEEEeeccCcccccccccccceEEEEecCCCeeE-EcccCCCCCCCCcccCccCCCCcceee
Q 005240 174 P-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISW 249 (706)
Q Consensus 174 ~-~~~~~~~~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~~ 249 (706)
. ..+..++|+|+ ++.|+..... ..|.+||+..++.. .+......................+.|
T Consensus 109 ~~~~v~~~~~~~~~~~~~l~~~~~d-------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 109 SKGSLYSVKFAPAHLGLKLACLGND-------------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETT-------------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred cCCceeEEEEcCCCCCcEEEEecCC-------------CcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 3 67889999999 9888866543 37999998754321 111000000000000000122447899
Q ss_pred ecC---CCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceE---EeecccccccceecCCC----ceEEEEeec
Q 005240 250 RAD---KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI---LHKLDLRFRSVSWCDDS----LALVNETWY 319 (706)
Q Consensus 250 spd---g~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~---l~~~~~~~~~~~wspDg----~~l~~~~~~ 319 (706)
+|+ +.. |+... .+ ..+..++. ..+.... +..+...+..+.|+|++ +.|+..+ .
T Consensus 176 ~p~~~~~~~-l~~~~-~~-----------~~~~~~~~---~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~-~ 238 (351)
T 3f3f_A 176 CPSRFSPEK-LAVSA-LE-----------QAIIYQRG---KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC-K 238 (351)
T ss_dssp CCCSSSCCE-EEEEE-TT-----------EEEEEEEC---TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE-T
T ss_pred ccCCCCCcE-EEEec-CC-----------CcEEEEcc---CCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc-C
Confidence 997 553 44331 11 12333333 3344332 23446678899999998 5666554 2
Q ss_pred cccceEEEEEc
Q 005240 320 KTSQTRTWLVC 330 (706)
Q Consensus 320 ~~~~~~l~~~d 330 (706)
++..+||.+.
T Consensus 239 -dg~i~iwd~~ 248 (351)
T 3f3f_A 239 -DGRIRIFKIT 248 (351)
T ss_dssp -TSCEEEEEEE
T ss_pred -CCeEEEEeCC
Confidence 2445555554
No 274
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.07 E-value=3.5e-09 Score=117.25 Aligned_cols=122 Identities=13% Similarity=0.042 Sum_probs=87.7
Q ss_pred ceEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEE
Q 005240 481 QKEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLA 560 (706)
Q Consensus 481 ~~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~ 560 (706)
..+...+...||..++....- . .|+||++||.+.. ...+ ...+..|+++||.|+.
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~g-------~---~p~vv~~HG~~~~-----------~~~~----~~~~~~l~~~G~~v~~ 290 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVELG-------S---GPAVCLCHGFPES-----------WYSW----RYQIPALAQAGYRVLA 290 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEEC-------S---SSEEEEECCTTCC-----------GGGG----TTHHHHHHHTTCEEEE
T ss_pred ccceeEEEeCCCcEEEEEEcC-------C---CCEEEEEeCCCCc-----------hhHH----HHHHHHHHhCCCEEEE
Confidence 445555666689888865552 1 3789999997521 1112 2356778899999999
Q ss_pred cCCCCcCCCCCCCCc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 561 GPSIPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 561 ~~~~~~~g~g~~~~~----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
.+.+ |+|.+... ........+|+.++++.+ +.+++.++|||+||++++.++.++|++++++|+.++.
T Consensus 291 ~D~~---G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 361 (555)
T 3i28_A 291 MDMK---GYGESSAPPEIEEYCMEVLCKEMVTFLDKL------GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 361 (555)
T ss_dssp ECCT---TSTTSCCCSCGGGGSHHHHHHHHHHHHHHH------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred ecCC---CCCCCCCCCCcccccHHHHHHHHHHHHHHc------CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccC
Confidence 7765 45555432 223556677777777766 3468999999999999999999999999999988764
No 275
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.07 E-value=1.2e-09 Score=110.92 Aligned_cols=130 Identities=11% Similarity=-0.021 Sum_probs=89.3
Q ss_pred eEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEc
Q 005240 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (706)
Q Consensus 482 ~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (706)
.+...++..||..|+++.+.|..-.+. +.|+||++||-+.. . .. ....+..|++.||.|+..
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~~~~---~~~~VvllHG~g~~--------~---~~----~~~~~~~L~~~G~~Vi~~ 68 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKENVPF---KNNTILIASGFARR--------M---DH----FAGLAEYLSTNGFHVFRY 68 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTTSCC---CSCEEEEECTTCGG--------G---GG----GHHHHHHHHTTTCCEEEE
T ss_pred ceEEEEEcCCCCEEEEEEecCcccCCC---CCCEEEEecCCccC--------c---hH----HHHHHHHHHHCCCEEEEe
Confidence 455667777999999999987641111 24789999995310 0 11 124566788899999997
Q ss_pred CCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 562 PSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 562 ~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
+.+|.. |.+... .........|+.++++++.+. +..++.++||||||++++.++.+ | +++++|+.++.
T Consensus 69 D~rGh~--G~S~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~ 138 (305)
T 1tht_A 69 DSLHHV--GLSSGSIDEFTMTTGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGV 138 (305)
T ss_dssp CCCBCC----------CCCHHHHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCC
T ss_pred eCCCCC--CCCCCcccceehHHHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCc
Confidence 766432 433221 122456678999999999754 34789999999999999999988 7 88998887765
No 276
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.07 E-value=9.5e-09 Score=106.82 Aligned_cols=260 Identities=10% Similarity=0.090 Sum_probs=146.1
Q ss_pred ceeEeecCCCCCCCCeeeeecCC---CCCcccceeeCCC----CCeEEEEeeccccccccCCceeEEEEEcCCCceeecc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYP---DGAKINFVSWSPD----GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF 78 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~SPD----G~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt 78 (706)
.|.|+++... +..+.+.... ....+..+.|||| |+.|+... ....|.++++.+++.....
T Consensus 45 ~v~vw~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~----------~dg~i~v~d~~~~~~~~~~ 111 (366)
T 3k26_A 45 RVTLYECHSQ---GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG----------SRGIIRIINPITMQCIKHY 111 (366)
T ss_dssp EEEEEEECGG---GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE----------TTCEEEEECTTTCCEEEEE
T ss_pred EEEEEEcCCC---cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec----------CCCEEEEEEchhceEeeee
Confidence 5788888651 2333443222 2235888999999 55676653 2357888898887765543
Q ss_pred c-CCCccccccccceEEec-CCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhccc
Q 005240 79 E-SPDICLNAVFGSFVWVN-NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTT 156 (706)
Q Consensus 79 ~-~~~~~~~~~~~~~~wSp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 156 (706)
. ... .+..+.|+| +++.|+..+. .
T Consensus 112 ~~~~~-----~i~~~~~~~~~~~~l~s~~~-------------------------------------------------d 137 (366)
T 3k26_A 112 VGHGN-----AINELKFHPRDPNLLLSVSK-------------------------------------------------D 137 (366)
T ss_dssp ESCCS-----CEEEEEECSSCTTEEEEEET-------------------------------------------------T
T ss_pred cCCCC-----cEEEEEECCCCCCEEEEEeC-------------------------------------------------C
Confidence 3 222 377899999 8898887642 1
Q ss_pred ceEEEEcc-CCCc-eec---CCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccC---
Q 005240 157 AQLVLGSL-DGTA-KDF---GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL--- 227 (706)
Q Consensus 157 ~~l~~~~l-~g~~-~~l---t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~--- 227 (706)
+.|.++++ +++. ..+ ... ..+..++|+|||++|+..... ..|.+|++.+++.......
T Consensus 138 g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~~ 204 (366)
T 3k26_A 138 HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-------------HSLKLWRINSKRMMNAIKESYD 204 (366)
T ss_dssp SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-------------SCEEEEESCSHHHHHHHHHHHT
T ss_pred CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-------------CCEEEEECCCCccccccceeEE
Confidence 56888888 4533 333 223 678999999999998766543 3789999986532211110
Q ss_pred --CCCCC---------CCcccC--ccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC----
Q 005240 228 --PPAED---------IPVCYN--SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---- 290 (706)
Q Consensus 228 --~~~~~---------~p~~~~--~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---- 290 (706)
+.... .+.+.. .....+..+.|+ ++. |+ .... .+.|.+||+ ..+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~-l~-~~~~-----------d~~i~~wd~---~~~~~~~~ 266 (366)
T 3k26_A 205 YNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL-IL-SKSC-----------ENAIVCWKP---GKMEDDID 266 (366)
T ss_dssp CCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE-EE-EECS-----------SSEEEEEEE---SSTTCCGG
T ss_pred ecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE-EE-EEec-----------CCEEEEEeC---CCcccccc
Confidence 00000 000000 011224466777 433 33 2111 124667776 2222
Q ss_pred -----------ceEEeecccccccceecCC--CceEEEEeeccccceEEEEEcCCCCCCCceee--ecCcccccccCCCC
Q 005240 291 -----------PEILHKLDLRFRSVSWCDD--SLALVNETWYKTSQTRTWLVCPGSKDVAPRVL--FDRVFENVYSDPGS 355 (706)
Q Consensus 291 -----------~~~l~~~~~~~~~~~wspD--g~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l--~~~~~~~~~~~~~~ 355 (706)
...+......+..+.|+|| ++.|+.... ...|.++|+.+++.....+ +.... .....
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~----~~~~v 338 (366)
T 3k26_A 267 KIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ----VGKLYVWDLEVEDPHKAKCTTLTHHK----CGAAI 338 (366)
T ss_dssp GCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT----TSCEEEEECCSSSGGGCEEEEECCTT----CCSCE
T ss_pred ccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec----CCcEEEEECCCCCCccccceEEcccc----cCCce
Confidence 1223334567888999999 998887642 2246677777642111111 11110 00112
Q ss_pred CceEeccCCCEEEEee
Q 005240 356 PMMTRTSTGTNVIAKI 371 (706)
Q Consensus 356 ~~~~~s~dg~~l~~~~ 371 (706)
..+.|+|||++|+...
T Consensus 339 ~~~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 339 RQTSFSRDSSILIAVC 354 (366)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEeCCCCCeEEEEe
Confidence 2478999999887764
No 277
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.06 E-value=1.1e-09 Score=116.06 Aligned_cols=151 Identities=15% Similarity=0.205 Sum_probs=92.3
Q ss_pred CCceEEEEEEccC--C--eEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHC
Q 005240 479 SLQKEMIKYQRKD--G--VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR 554 (706)
Q Consensus 479 ~~~~~~~~~~~~d--g--~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 554 (706)
.+....+.|.+.+ | ..+.++++.|.+..+ .+++|+||++||.+..... .....+. ........+..|+++
T Consensus 43 ~v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~--~~~~P~vv~~HG~~~~~~~---~~~~~~~-~~~~~~~~~~~l~~~ 116 (397)
T 3h2g_A 43 NVRVAEFTYATIGVEGEPATASGVLLIPGGERC--SGPYPLLGWGHPTEALRAQ---EQAKEIR-DAKGDDPLVTRLASQ 116 (397)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEECTTC--CSCEEEEEEECCCCCBTTC---CHHHHHH-HTTTCSHHHHTTGGG
T ss_pred CeEEEEEEEEecCCCCCeEEEEEEEEeCCCCCC--CCCCcEEEEeCCCcCCCCc---ccccccc-cccchHHHHHHHHHC
Confidence 3456667776654 4 469999999987532 2468999999997532100 0000000 001123456778899
Q ss_pred CeEEEEcCCCCcCCCCCCCC------chhhHHHHHHHHHHHHHHHHHc-CCCCCCcEEEEEechHHHHHHHHHH-hCC--
Q 005240 555 RFAVLAGPSIPIIGEGDKLP------NDRFVEQLVSSAEAAVEEVVRR-GVADPSRIAVGGHSYGAFMTAHLLA-HAP-- 624 (706)
Q Consensus 555 G~~v~~~~~~~~~g~g~~~~------~~~~~~~~~~D~~~~~~~l~~~-~~id~~~i~i~G~S~GG~~a~~~~~-~~p-- 624 (706)
||.|+.++++|. |.+.. ........+.|...++..+.++ +..|+++|+++||||||+++++++. ..+
T Consensus 117 G~~V~~~D~~G~---G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~ 193 (397)
T 3h2g_A 117 GYVVVGSDYLGL---GKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHL 193 (397)
T ss_dssp TCEEEEECCTTS---TTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEecCCCC---CCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhc
Confidence 999999887744 33311 1111123344555555555543 6556789999999999999988862 222
Q ss_pred --C-ceeEEEeccCCCC
Q 005240 625 --H-LFCCGIARSGSYN 638 (706)
Q Consensus 625 --~-~~~a~v~~~~~~d 638 (706)
+ .+.+++..++.++
T Consensus 194 ~~~~~~~~~~~~~~~~~ 210 (397)
T 3h2g_A 194 SKEFHLVASAPISGPYA 210 (397)
T ss_dssp TTTSEEEEEEEESCCSS
T ss_pred CcCcceEEEeccccccc
Confidence 1 5788888777655
No 278
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.06 E-value=2.8e-08 Score=103.82 Aligned_cols=229 Identities=10% Similarity=0.069 Sum_probs=124.4
Q ss_pred ceEEEEccC-C--C-ceecCCC-ceEeeeeeCCC--CcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCC
Q 005240 157 AQLVLGSLD-G--T-AKDFGTP-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP 229 (706)
Q Consensus 157 ~~l~~~~l~-g--~-~~~lt~~-~~~~~~~~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 229 (706)
+.|.++++. + + ...+... ..+..++|+|+ ++.|+..+.+ ..|.+|++.+++...+.....
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-------------g~v~iwd~~~~~~~~~~~~~~ 99 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------------GKVLIWKEENGRWSQIAVHAV 99 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------------SCEEEEEEETTEEEEEEEECC
T ss_pred CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-------------CEEEEEEcCCCceeEeeeecC
Confidence 456666663 2 2 2334434 67889999988 8888765543 379999998775333222221
Q ss_pred CCCCCcccCccCCCCcceeeecC--CCceEEEEEeccCCCCccccCccceeeeecCCCCCCC---CceEEeecccccccc
Q 005240 230 AEDIPVCYNSVREGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE---KPEILHKLDLRFRSV 304 (706)
Q Consensus 230 ~~~~p~~~~~~~~g~~~~~~spd--g~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~~~~l~~~~~~~~~~ 304 (706)
.. ..+..+.|+|+ +.. |+... . ...|.++|+ ..+ ....+......+..+
T Consensus 100 ~~----------~~v~~~~~~~~~~~~~-l~~~~-~-----------d~~i~v~d~---~~~~~~~~~~~~~~~~~v~~~ 153 (379)
T 3jrp_A 100 HS----------ASVNSVQWAPHEYGPL-LLVAS-S-----------DGKVSVVEF---KENGTTSPIIIDAHAIGVNSA 153 (379)
T ss_dssp CS----------SCEEEEEECCGGGCSE-EEEEE-T-----------TSEEEEEEC---CTTSCCCEEEEECCTTCEEEE
T ss_pred CC----------cceEEEEeCCCCCCCE-EEEec-C-----------CCcEEEEec---CCCCceeeEEecCCCCceEEE
Confidence 11 22457899999 665 44331 1 124778888 333 222344567788899
Q ss_pred eecC-------------CCceEEEEeeccccceEEEEEcCCCCCCCceee--ecCcccccccCCCCCceEeccC---CCE
Q 005240 305 SWCD-------------DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL--FDRVFENVYSDPGSPMMTRTST---GTN 366 (706)
Q Consensus 305 ~wsp-------------Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~s~d---g~~ 366 (706)
.|+| |+..|+..+.+ +. |.++|+.++......+ ...... ....+.|+|+ +++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~d--g~--i~i~d~~~~~~~~~~~~~~~~h~~------~v~~~~~sp~~~~~~~ 223 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGAD--NL--VKIWKYNSDAQTYVLESTLEGHSD------WVRDVAWSPTVLLRSY 223 (379)
T ss_dssp EECCCC----------CTTCEEEEEETT--SC--EEEEEEETTTTEEEEEEEECCCSS------CEEEEEECCCCSSSEE
T ss_pred EEcCccccccccccCCCCCCEEEEEeCC--Ce--EEEEEecCCCcceeeEEEEecccC------cEeEEEECCCCCCCCe
Confidence 9999 68888876522 33 4455554432111111 111111 1224778999 676
Q ss_pred EEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCc---eeeeecccchhhhhhhhhhccCCCceecccCCCEEEE
Q 005240 367 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGS---KERIWESNREKYFETAVALVFGQGEEDINLNQLKILT 443 (706)
Q Consensus 367 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~ 443 (706)
|+..... + .+..+|+.+++ ...+..... .......+.|+||++.|+.
T Consensus 224 l~s~~~d----g-----------------~i~iwd~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~g~~l~~ 273 (379)
T 3jrp_A 224 LASVSQD----R-----------------TCIIWTQDNEQGPWKKTLLKEEK---------FPDVLWRASWSLSGNVLAL 273 (379)
T ss_dssp EEEEETT----S-----------------CEEEEEESSTTSCCEEEESSSSC---------CSSCEEEEEECSSSCCEEE
T ss_pred EEEEeCC----C-----------------EEEEEeCCCCCccceeeeecccc---------CCCcEEEEEEcCCCCEEEE
Confidence 6655411 1 24445555442 112211100 0111235789999998877
Q ss_pred EEecCCCCcEEEEEECCC-CceeEee
Q 005240 444 SKESKTEITQYHILSWPL-KKSSQIT 468 (706)
Q Consensus 444 ~~~~~~~p~~v~~~~~~~-~~~~~lt 468 (706)
...+. .|++|++.. ++...+.
T Consensus 274 ~~~dg----~i~iw~~~~~~~~~~~~ 295 (379)
T 3jrp_A 274 SGGDN----KVTLWKENLEGKWEPAG 295 (379)
T ss_dssp EESSS----SEEEEEEEETTEEEEEE
T ss_pred ecCCC----cEEEEeCCCCCcccccc
Confidence 65543 377777653 3333333
No 279
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.05 E-value=1e-07 Score=98.51 Aligned_cols=282 Identities=12% Similarity=0.013 Sum_probs=146.9
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCC--
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-- 82 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~-- 82 (706)
..|++.|..+ ++. +..++.+... .+++||||++|+.+.........+.....|.++|+++++...-...+.
T Consensus 59 ~~V~ViD~~t----~~v--~~~I~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~ 131 (386)
T 3sjl_D 59 TQQFVIDGEA----GRV--IGMIDGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAP 131 (386)
T ss_dssp EEEEEEETTT----TEE--EEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CEEEEEECCC----CeE--EEEEECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcc
Confidence 4677877755 443 3334555544 499999999996654210000000123569999999887544221111
Q ss_pred c-cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 83 I-CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 83 ~-~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
+ ........+.+||||++||+.... ....|.+
T Consensus 132 r~~~g~~P~~~a~spDGk~lyVan~~-----------------------------------------------~~~~VsV 164 (386)
T 3sjl_D 132 RFLVGTYPWMTSLTPDGKTLLFYQFS-----------------------------------------------PAPAVGV 164 (386)
T ss_dssp CCCBSCCGGGEEECTTSSEEEEEECS-----------------------------------------------SSCEEEE
T ss_pred ccccCCCCceEEEcCCCCEEEEEEcC-----------------------------------------------CCCeEEE
Confidence 0 000125678999999998875210 1156888
Q ss_pred Ecc-CCC-ceecCCCce--------EeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCC
Q 005240 162 GSL-DGT-AKDFGTPAV--------YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE 231 (706)
Q Consensus 162 ~~l-~g~-~~~lt~~~~--------~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~ 231 (706)
+|+ +++ ...+..++. ...++.++||+.+++...... .+ + +. ...+.. .+
T Consensus 165 ID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g------------~v-~-~~----~~~~~~---~~ 223 (386)
T 3sjl_D 165 VDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEG------------TP-E-IT----HTEVFH---PE 223 (386)
T ss_dssp EETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSS------------CC-E-EE----ECCCCS---CT
T ss_pred EECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCC------------eE-E-Ee----ecceec---cc
Confidence 888 453 333432211 112367788876665543211 11 0 00 000100 11
Q ss_pred CCCcccCccCCCCcceeee-cCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec-------------
Q 005240 232 DIPVCYNSVREGMRSISWR-ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL------------- 297 (706)
Q Consensus 232 ~~p~~~~~~~~g~~~~~~s-pdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~------------- 297 (706)
..|.+. ...|. +||+ ++|++. .+.++++|. .++.++.+...
T Consensus 224 ~~~~~~--------~~~~~~~dG~--~~~vs~------------~g~V~v~d~---~~~~~~v~~~~~~~~~~~~~~g~~ 278 (386)
T 3sjl_D 224 DEFLIN--------HPAYSQKAGR--LVWPTY------------TGKIHQIDL---SSGDAKFLPAVEALTEAERADGWR 278 (386)
T ss_dssp TSCBCS--------CCEEETTTTE--EEEEBT------------TSEEEEEEC---TTSSCEECCCEESSCHHHHHTTEE
T ss_pred cccccc--------cceeEcCCCc--EEEEeC------------CCEEEEEEC---CCCcceeecceecccccccccccc
Confidence 112111 23564 6774 666642 124888887 55544333211
Q ss_pred ccccccceecCCCceEEEEeecc------ccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 298 DLRFRSVSWCDDSLALVNETWYK------TSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 298 ~~~~~~~~wspDg~~l~~~~~~~------~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
......+..++++++++...... ....+||.+|+++.+...+........ .+.+|+||+.+++..
T Consensus 279 p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~---------~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 279 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEID---------SINVSQDEKPLLYAL 349 (386)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEEC---------EEEECSSSSCEEEEE
T ss_pred CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcc---------eEEECCCCCeEEEEE
Confidence 22334566788988888764321 234689999999964222222222111 266799998443332
Q ss_pred eccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeeccc
Q 005240 372 KKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (706)
Q Consensus 372 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (706)
.. ....|..+|..+++..+-+...
T Consensus 350 n~-------------------~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 350 ST-------------------GDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp ET-------------------TTTEEEEEETTTCCEEEEECCC
T ss_pred cC-------------------CCCeEEEEECCCCcEEEEecCC
Confidence 11 1124677899888876555443
No 280
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.04 E-value=1.7e-09 Score=107.36 Aligned_cols=80 Identities=16% Similarity=0.235 Sum_probs=61.5
Q ss_pred HHHH-CCeEEEEcCCCCcCCCCCCCCch-hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCce
Q 005240 550 IFLA-RRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLF 627 (706)
Q Consensus 550 ~l~~-~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~ 627 (706)
.|++ .||.|+..+.+ |+|.+.... .......+|+.++++.+. +..++.++|||+||.+++.++.++|+++
T Consensus 43 ~l~~~~g~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 114 (272)
T 3fsg_A 43 PLSNVGQYQRIYLDLP---GMGNSDPISPSTSDNVLETLIEAIEEII-----GARRFILYGHSYGGYLAQAIAFHLKDQT 114 (272)
T ss_dssp TSTTSTTSEEEEECCT---TSTTCCCCSSCSHHHHHHHHHHHHHHHH-----TTCCEEEEEEEHHHHHHHHHHHHSGGGE
T ss_pred HHhccCceEEEEecCC---CCCCCCCCCCCCHHHHHHHHHHHHHHHh-----CCCcEEEEEeCchHHHHHHHHHhChHhh
Confidence 3455 69999996665 455554332 345667778877777742 3478999999999999999999999999
Q ss_pred eEEEeccCCC
Q 005240 628 CCGIARSGSY 637 (706)
Q Consensus 628 ~a~v~~~~~~ 637 (706)
+++++.+|..
T Consensus 115 ~~lvl~~~~~ 124 (272)
T 3fsg_A 115 LGVFLTCPVI 124 (272)
T ss_dssp EEEEEEEECS
T ss_pred heeEEECccc
Confidence 9999999874
No 281
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.04 E-value=3.5e-09 Score=105.48 Aligned_cols=116 Identities=13% Similarity=0.110 Sum_probs=77.6
Q ss_pred EEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCc
Q 005240 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (706)
Q Consensus 487 ~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (706)
+...||..|....+- .+ |.||++||.+.. ...+ ...+..|++.||.|+..+.+
T Consensus 3 ~~~~~g~~l~y~~~G-------~g---~~vvllHG~~~~-----------~~~w----~~~~~~l~~~g~~vi~~D~~-- 55 (271)
T 3ia2_A 3 FVAKDGTQIYFKDWG-------SG---KPVLFSHGWLLD-----------ADMW----EYQMEYLSSRGYRTIAFDRR-- 55 (271)
T ss_dssp EECTTSCEEEEEEES-------SS---SEEEEECCTTCC-----------GGGG----HHHHHHHHTTTCEEEEECCT--
T ss_pred EEcCCCCEEEEEccC-------CC---CeEEEECCCCCc-----------HHHH----HHHHHHHHhCCceEEEecCC--
Confidence 566789888766552 11 347789996421 0111 13456677899999996665
Q ss_pred CCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHH-hCCCceeEEEeccCC
Q 005240 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA-HAPHLFCCGIARSGS 636 (706)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~-~~p~~~~a~v~~~~~ 636 (706)
|+|.+... ........+|+.+.++.+ +.+++.++||||||++++.++. +.|+++++++..++.
T Consensus 56 -G~G~S~~~~~~~~~~~~a~d~~~~l~~l------~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~ 121 (271)
T 3ia2_A 56 -GFGRSDQPWTGNDYDTFADDIAQLIEHL------DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAV 121 (271)
T ss_dssp -TSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred -CCccCCCCCCCCCHHHHHHHHHHHHHHh------CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccC
Confidence 55555332 233566677888877766 3468999999999986666555 458999999988754
No 282
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.04 E-value=1.7e-07 Score=103.21 Aligned_cols=203 Identities=8% Similarity=-0.002 Sum_probs=123.8
Q ss_pred cceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCC
Q 005240 34 NFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPP 113 (706)
Q Consensus 34 ~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~ 113 (706)
..+.|+.|...++|+.+ .+...|+++|.++++......... .+..+.+||||++||+...
T Consensus 157 ~~~~~~~d~~~~~~V~~--------~~~~~V~viD~~t~~v~~~i~~g~-----~p~~v~~SpDGr~lyv~~~------- 216 (567)
T 1qks_A 157 TQQMNDWDLENLFSVTL--------RDAGQIALIDGSTYEIKTVLDTGY-----AVHISRLSASGRYLFVIGR------- 216 (567)
T ss_dssp SSCCSCCCGGGEEEEEE--------TTTTEEEEEETTTCCEEEEEECSS-----CEEEEEECTTSCEEEEEET-------
T ss_pred cccccccCCCceEEEEe--------CCCCeEEEEECCCCeEEEEEeCCC-----CccceEECCCCCEEEEEcC-------
Confidence 35678888777888876 445799999999887654221121 1557899999999886531
Q ss_pred CCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC---C-CceecCCCceEeeeeeC----CC
Q 005240 114 KKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD---G-TAKDFGTPAVYTAVEPS----PD 185 (706)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~---g-~~~~lt~~~~~~~~~~S----pD 185 (706)
.+.|.++|+. + ....+..+.....+++| ||
T Consensus 217 ------------------------------------------dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pD 254 (567)
T 1qks_A 217 ------------------------------------------DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWE 254 (567)
T ss_dssp ------------------------------------------TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCT
T ss_pred ------------------------------------------CCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCC
Confidence 1578888983 3 23344444567789999 79
Q ss_pred CcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCC--CC---CCcccCccCCCCcceeeecCCCceEEEE
Q 005240 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA--ED---IPVCYNSVREGMRSISWRADKPSTLYWV 260 (706)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~--~~---~p~~~~~~~~g~~~~~~spdg~~~l~~~ 260 (706)
|+++++.... ...+.++|..+.++.......+. +. .|. .....+..|+++.. ++ +
T Consensus 255 Gk~l~v~n~~------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~------~rva~i~~s~~~~~-~v-v 314 (567)
T 1qks_A 255 DKYAIAGAYW------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPE------PRVAAILASHYRPE-FI-V 314 (567)
T ss_dssp TTEEEEEEEE------------TTEEEEEETTTCCEEEEEECCEECTTTCCEESC------CCEEEEEECSSSSE-EE-E
T ss_pred CCEEEEEEcc------------CCeEEEEECCCCcEEEEEeccccccccccccCC------CceEEEEEcCCCCE-EE-E
Confidence 9999877654 24788999876554432221110 00 010 01225667787764 33 3
Q ss_pred EeccCCCCccccCccceeeeecCCCCCCCCceEEee--cccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 261 EAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
... ..+.|+++|. ...+...++. .........|+|||++++.+.. ....|.++|++++
T Consensus 315 ~~~----------~~g~v~~vd~---~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~---~sn~V~ViD~~t~ 374 (567)
T 1qks_A 315 NVK----------ETGKILLVDY---TDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN---ARNKLVVIDTKEG 374 (567)
T ss_dssp EET----------TTTEEEEEET---TCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG---GGTEEEEEETTTT
T ss_pred Eec----------CCCeEEEEec---CCCccceeeeeeccccccCceECCCCCEEEEEeC---CCCeEEEEECCCC
Confidence 211 2235777776 2222111221 2233446789999999887653 2346889999984
No 283
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.04 E-value=1.2e-09 Score=102.79 Aligned_cols=154 Identities=14% Similarity=-0.003 Sum_probs=91.7
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 592 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~ 592 (706)
.|+||++||.+... . ..+.......|++.||.|+..+.+.+ + . . .....++|+...++.
T Consensus 4 ~p~vv~~HG~~~~~-----------~--~~~~~~~~~~l~~~g~~v~~~d~~~~-~--~--~---~~~~~~~~~~~~~~~ 62 (192)
T 1uxo_A 4 TKQVYIIHGYRASS-----------T--NHWFPWLKKRLLADGVQADILNMPNP-L--Q--P---RLEDWLDTLSLYQHT 62 (192)
T ss_dssp CCEEEEECCTTCCT-----------T--STTHHHHHHHHHHTTCEEEEECCSCT-T--S--C---CHHHHHHHHHTTGGG
T ss_pred CCEEEEEcCCCCCc-----------c--hhHHHHHHHHHHhCCcEEEEecCCCC-C--C--C---CHHHHHHHHHHHHHh
Confidence 47899999964210 0 01111222457789999999777611 1 1 1 123334443333322
Q ss_pred HHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC--ceeEEEeccCCCCCC--------C--CCccch-------------
Q 005240 593 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH--LFCCGIARSGSYNKT--------L--TPFGFQ------------- 647 (706)
Q Consensus 593 l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~--~~~a~v~~~~~~d~~--------~--~~~~~~------------- 647 (706)
+ ..++.++|||+||.+++.++.++|+ ++++++..+|..... + .+..+.
T Consensus 63 ------~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 135 (192)
T 1uxo_A 63 ------L-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQKIIESAKHRAVIA 135 (192)
T ss_dssp ------C-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGGGGGTCSCCCHHHHHHHEEEEEEEE
T ss_pred ------c-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccchhhhhhhhcCCCHHHHHhhcCCEEEEe
Confidence 2 4789999999999999999999999 999999999865411 0 011000
Q ss_pred -------HHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhcc
Q 005240 648 -------AERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCLS 697 (706)
Q Consensus 648 -------~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~~ 697 (706)
+.+..+.+.+.- ..+++++|+++|.+..... ..+.++.+||.+++..
T Consensus 136 g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~--~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 136 SKDDQIVPFSFSKDLAQQI-DAALYEVQHGGHFLEDEGF--TSLPIVYDVLTSYFSK 189 (192)
T ss_dssp ETTCSSSCHHHHHHHHHHT-TCEEEEETTCTTSCGGGTC--SCCHHHHHHHHHHHHC
T ss_pred cCCCCcCCHHHHHHHHHhc-CceEEEeCCCcCccccccc--ccHHHHHHHHHHHHHH
Confidence 002223333322 5689999999998753211 1223466777776643
No 284
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.04 E-value=9.6e-08 Score=98.12 Aligned_cols=256 Identities=12% Similarity=0.012 Sum_probs=144.0
Q ss_pred ceeEeecCCCCCCCCeeeeecCCC-CCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
.|.|+++.... ......+..+.. ...+....|||||+.|+.... ...|.+++...+...........
T Consensus 62 ~i~vWd~~~~~-~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~----------d~~i~~~~~~~~~~~~~~~~~~~- 129 (340)
T 4aow_A 62 TIIMWKLTRDE-TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW----------DGTLRLWDLTTGTTTRRFVGHTK- 129 (340)
T ss_dssp CEEEEEECCSS-SCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECCSS-
T ss_pred eEEEEECCCCC-cccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc----------cccceEEeecccceeeeecCCCC-
Confidence 57888887621 111122222222 235888999999999987642 24677778776655444322221
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
......++++++.|+..+.+ +.+.++++
T Consensus 130 ---~~~~~~~~~~~~~l~s~s~d-------------------------------------------------~~~~~~d~ 157 (340)
T 4aow_A 130 ---DVLSVAFSSDNRQIVSGSRD-------------------------------------------------KTIKLWNT 157 (340)
T ss_dssp ---CEEEEEECTTSSCEEEEETT-------------------------------------------------SCEEEECT
T ss_pred ---ceeEEEEeecCccceeecCC-------------------------------------------------CeEEEEEe
Confidence 14566789999988765421 34556676
Q ss_pred CC--CceecCCC--ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCcc
Q 005240 165 DG--TAKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (706)
Q Consensus 165 ~g--~~~~lt~~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~ 240 (706)
.+ ........ ..+..++|++++...++.+... ...|.+|++...+.........
T Consensus 158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~-----------d~~i~i~d~~~~~~~~~~~~h~----------- 215 (340)
T 4aow_A 158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW-----------DKLVKVWNLANCKLKTNHIGHT----------- 215 (340)
T ss_dssp TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEET-----------TSCEEEEETTTTEEEEEECCCS-----------
T ss_pred CCCceEEEEeccccCcccceEEccCCCCcEEEEEcC-----------CCEEEEEECCCCceeeEecCCC-----------
Confidence 44 22222222 5677888999886544333322 2478999998765543322210
Q ss_pred CCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeecc
Q 005240 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYK 320 (706)
Q Consensus 241 ~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~ 320 (706)
..+..+.|+||++. |+.. .. ...|.+||+ ...+..........+..+.|+|++..++... +
T Consensus 216 -~~v~~~~~s~~~~~-l~s~-s~-----------Dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-d- 276 (340)
T 4aow_A 216 -GYLNTVTVSPDGSL-CASG-GK-----------DGQAMLWDL---NEGKHLYTLDGGDIINALCFSPNRYWLCAAT-G- 276 (340)
T ss_dssp -SCEEEEEECTTSSE-EEEE-ET-----------TCEEEEEET---TTTEEEEEEECSSCEEEEEECSSSSEEEEEE-T-
T ss_pred -CcEEEEEECCCCCE-EEEE-eC-----------CCeEEEEEe---ccCceeeeecCCceEEeeecCCCCceeeccC-C-
Confidence 12447899999985 4422 11 124788888 4444333344456678889999987655432 1
Q ss_pred ccceEEEEEcCCCCCCCceeeecCccccc---ccCCCCCceEeccCCCEEEEee
Q 005240 321 TSQTRTWLVCPGSKDVAPRVLFDRVFENV---YSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 321 ~~~~~l~~~d~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
..|.++|+.+. ............. ........+.|+|||++|+...
T Consensus 277 ---~~i~iwd~~~~--~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 277 ---PSIKIWDLEGK--IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp ---TEEEEEETTTT--EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred ---CEEEEEECCCC--eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 24666777763 1111111111100 0111233578999999887654
No 285
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=99.04 E-value=3.6e-10 Score=123.59 Aligned_cols=132 Identities=19% Similarity=0.233 Sum_probs=91.8
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCC-Cc
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSI-PI 566 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~-~~ 566 (706)
+.|...+ -+|.|.... .++|+||++|||++..|+..... .....|++ .|++|+..+|| +.
T Consensus 89 ~edcl~l--nv~~P~~~~----~~~Pv~v~iHGGg~~~g~~~~~~------------~~~~~la~~~~~vvv~~nYRlg~ 150 (529)
T 1p0i_A 89 SEDCLYL--NVWIPAPKP----KNATVLIWIYGGGFQTGTSSLHV------------YDGKFLARVERVIVVSMNYRVGA 150 (529)
T ss_dssp CSCCCEE--EEEEESSCC----SSEEEEEEECCSTTTSCCTTCGG------------GCTHHHHHHHCCEEEEECCCCHH
T ss_pred CCcCCeE--EEeeCCCCC----CCCeEEEEECCCccccCCCCccc------------cChHHHhccCCeEEEEecccccc
Confidence 4566555 478887532 24899999999986542221110 11345665 79999998887 33
Q ss_pred CCCCCC-CCchhhHHHHHHHHHHHHHHHHHc--CC-CCCCcEEEEEechHHHHHHHHHHhC--CCceeEEEeccCCCC
Q 005240 567 IGEGDK-LPNDRFVEQLVSSAEAAVEEVVRR--GV-ADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 638 (706)
Q Consensus 567 ~g~g~~-~~~~~~~~~~~~D~~~~~~~l~~~--~~-id~~~i~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~d 638 (706)
.|+... ......++..+.|+..|++|++++ .+ .||+||.|+|+|+||+++++++... ..+|+++|+.+|...
T Consensus 151 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 151 LGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp HHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred cccccCCCCCCCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 344322 111112344588999999999885 22 7999999999999999999998764 458999999999764
No 286
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.03 E-value=3.1e-08 Score=104.21 Aligned_cols=93 Identities=14% Similarity=-0.111 Sum_probs=56.2
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceee-cccC-CC
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFES-PD 82 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-lt~~-~~ 82 (706)
..|++.|+.+ ++. +..++.+... .+.+||||++|+.+.........+.....|.++|+.+++... |.-. ..
T Consensus 99 ~~VsVID~~t----~~v--v~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGST----GRI--LGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTT----TEE--EEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCC
T ss_pred CeEEEEECCC----CEE--EEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcc
Confidence 5788888865 433 3444566555 899999999996654210000001134679999999887643 3211 11
Q ss_pred cc-ccccccceEEecCCcEEEEE
Q 005240 83 IC-LNAVFGSFVWVNNSTLLIFT 104 (706)
Q Consensus 83 ~~-~~~~~~~~~wSpDg~~l~~~ 104 (706)
+. .......+.+||||++||+.
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~ 194 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFY 194 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEE
T ss_pred ccccCCCcceEEEcCCCCEEEEE
Confidence 00 00125688999999998876
No 287
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.03 E-value=3.1e-08 Score=103.02 Aligned_cols=217 Identities=7% Similarity=-0.033 Sum_probs=127.5
Q ss_pred CcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 005240 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (706)
Q Consensus 31 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~ 110 (706)
..+..++|||||+.||.... . .+.++++++++........ .+....|+++++.+++...
T Consensus 20 ~~V~~v~fs~dg~~la~g~~---------~--~~~iw~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---- 78 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTL---------K--SFEIYNVHPVAHIMSQEMR------HLSKVRMLHRTNYVAFVTG---- 78 (355)
T ss_dssp CCCCEEEECTTSSEEEEECS---------S--EEEEEEETTEEEEEEEECS------CCCEEEECTTSSEEEEECS----
T ss_pred CceEEEEECCCCCEEEEEcC---------C--EEEEEecCCcceeeeeecC------CeEEEEEcCCCCEEEEEEC----
Confidence 35889999999999987542 2 2445666665543322211 1567789999998876532
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC-CceecCCCceEeeeeeCCCCcE
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTPAVYTAVEPSPDQKY 188 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g-~~~~lt~~~~~~~~~~SpDG~~ 188 (706)
....|.++|+ +| ....+.....+..+.+++++
T Consensus 79 --------------------------------------------~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~-- 112 (355)
T 3vu4_A 79 --------------------------------------------VKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF-- 112 (355)
T ss_dssp --------------------------------------------STTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--
T ss_pred --------------------------------------------CccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--
Confidence 1146777887 56 33344433677888999875
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCC--eeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGK--LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~ 266 (706)
++... . ..+++|++.+. ....+.. + . ....+++ .. +++....
T Consensus 113 ~~~~~-~-------------~~i~i~d~~~~~~~~~~~~~-------~-------~--~~~~~s~--~~-la~~sg~--- 156 (355)
T 3vu4_A 113 IVVSY-G-------------DVISVFKFGNPWKRITDDIR-------F-------G--GVCEFSN--GL-LVYSNEF--- 156 (355)
T ss_dssp EEEEE-T-------------TEEEEEESSTTCCBSSCCEE-------E-------E--EEEEEET--TE-EEEEESS---
T ss_pred EEEEE-c-------------CEEEEEECCCCceeeEEecc-------C-------C--ceEEEEc--cE-EEEeCCC---
Confidence 33332 1 37999999865 2222211 1 1 1234555 22 4433111
Q ss_pred CCccccCccceeeeecCCCCCCCC-----------------ceEEeecccccccceecCCCceEEEEeeccccceEEEEE
Q 005240 267 DANVEVSPRDIIYTQPAEPAEGEK-----------------PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLV 329 (706)
Q Consensus 267 ~~~~~~~~~~~l~~~d~~~~~~~~-----------------~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~ 329 (706)
..+.|.+||+ .++. ...+..+...+..+.|+|||+.|+..+.+ +. .|.++
T Consensus 157 -------~~g~v~iwd~---~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d--~~-~v~iw 223 (355)
T 3vu4_A 157 -------NLGQIHITKL---QSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQD--GT-IIRVF 223 (355)
T ss_dssp -------CTTCEEEEEC---CC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETT--CS-EEEEE
T ss_pred -------cCcEEEEEEC---CCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCC--CC-EEEEE
Confidence 1124778887 4433 45566678889999999999988876522 22 15566
Q ss_pred cCCCCCCCceeeec-C-cccccccCCCCCceEeccCCCEEEEee
Q 005240 330 CPGSKDVAPRVLFD-R-VFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 330 d~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
|+.++ +....+. . ... ....+.|+|||++|+...
T Consensus 224 d~~~~--~~~~~~~~g~h~~------~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 224 KTEDG--VLVREFRRGLDRA------DVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp ETTTC--CEEEEEECTTCCS------CEEEEEECTTSCEEEEEE
T ss_pred ECCCC--cEEEEEEcCCCCC------cEEEEEECCCCCEEEEEE
Confidence 77664 2222222 1 111 123478999999988765
No 288
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.03 E-value=2.3e-09 Score=109.44 Aligned_cols=112 Identities=15% Similarity=0.108 Sum_probs=76.7
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (706)
+|..+......| .|+||++||.+.. ...+ ...+..|++ ||.|+..+.+ |+|
T Consensus 56 ~~~~~~~~~~g~----------~p~vv~lhG~~~~-----------~~~~----~~~~~~L~~-~~~v~~~D~~---G~G 106 (314)
T 3kxp_A 56 GRITLNVREKGS----------GPLMLFFHGITSN-----------SAVF----EPLMIRLSD-RFTTIAVDQR---GHG 106 (314)
T ss_dssp SSCEEEEEEECC----------SSEEEEECCTTCC-----------GGGG----HHHHHTTTT-TSEEEEECCT---TST
T ss_pred CCEEEEEEecCC----------CCEEEEECCCCCC-----------HHHH----HHHHHHHHc-CCeEEEEeCC---CcC
Confidence 677777665522 3689999996421 1111 123444444 7999997765 444
Q ss_pred CCCC--chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 571 DKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 571 ~~~~--~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
.+.. .....+...+|+..+++++ +..+++++|+|+||++++.++.++|++++++|+.+|..
T Consensus 107 ~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 169 (314)
T 3kxp_A 107 LSDKPETGYEANDYADDIAGLIRTL------ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTP 169 (314)
T ss_dssp TSCCCSSCCSHHHHHHHHHHHHHHH------TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCC
Confidence 4432 2223456677777777665 23689999999999999999999999999999998753
No 289
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.03 E-value=2.9e-09 Score=105.31 Aligned_cols=114 Identities=17% Similarity=0.106 Sum_probs=78.3
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (706)
+|..+.....-+++ -|+||++||.+.. ...+. ..+..| +.+|.|+..+.+ |+|
T Consensus 7 ~g~~l~~~~~g~~~--------~~~vv~lHG~~~~-----------~~~~~----~~~~~L-~~~~~v~~~D~~---G~G 59 (264)
T 3ibt_A 7 NGTLMTYSESGDPH--------APTLFLLSGWCQD-----------HRLFK----NLAPLL-ARDFHVICPDWR---GHD 59 (264)
T ss_dssp TTEECCEEEESCSS--------SCEEEEECCTTCC-----------GGGGT----THHHHH-TTTSEEEEECCT---TCS
T ss_pred CCeEEEEEEeCCCC--------CCeEEEEcCCCCc-----------HhHHH----HHHHHH-HhcCcEEEEccc---cCC
Confidence 67777766554421 3689999997421 11121 234455 456999986665 455
Q ss_pred CCCC--chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC-CCceeEEEeccCCC
Q 005240 571 DKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGSY 637 (706)
Q Consensus 571 ~~~~--~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~~ 637 (706)
.+.. .........+|+.++++.+ +.+++.++|||+||.+++.++.++ |++++++|..++..
T Consensus 60 ~S~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 60 AKQTDSGDFDSQTLAQDLLAFIDAK------GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp TTCCCCSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred CCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 5543 2234556677777766654 346899999999999999999999 99999999998754
No 290
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.02 E-value=2.6e-09 Score=105.88 Aligned_cols=101 Identities=11% Similarity=0.038 Sum_probs=73.0
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCch---hhHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAA 589 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~D~~~~ 589 (706)
.|+||++||.+.. ...+ ......|+++||.|+..+.+ |+|.+.... ......++|+.+.
T Consensus 12 ~~~vvllHG~~~~-----------~~~~----~~~~~~l~~~g~~v~~~D~~---G~G~S~~~~~~~~~~~~~~~~~~~~ 73 (267)
T 3sty_A 12 KKHFVLVHAAFHG-----------AWCW----YKIVALMRSSGHNVTALDLG---ASGINPKQALQIPNFSDYLSPLMEF 73 (267)
T ss_dssp CCEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT---TSTTCSCCGGGCCSHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-----------cchH----HHHHHHHHhcCCeEEEeccc---cCCCCCCcCCccCCHHHHHHHHHHH
Confidence 4789999997421 1111 24566788899999996665 566664432 2355566666665
Q ss_pred HHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 590 ~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
++.+ + +..++.++|||+||.+++.++.++|++++++|..++.
T Consensus 74 l~~l---~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 115 (267)
T 3sty_A 74 MASL---P--ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGL 115 (267)
T ss_dssp HHTS---C--TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCC
T ss_pred HHhc---C--CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCC
Confidence 5544 1 3578999999999999999999999999999988874
No 291
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.02 E-value=2.9e-09 Score=112.45 Aligned_cols=145 Identities=15% Similarity=0.124 Sum_probs=87.1
Q ss_pred CceEEEEEEccC--Ce--EEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcC----------CCCc
Q 005240 480 LQKEMIKYQRKD--GV--PLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFS----------GMTP 545 (706)
Q Consensus 480 ~~~~~~~~~~~d--g~--~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~----------~~~~ 545 (706)
.+...+.|.+.| |. ...+.++.|.+-. ++.|+|.|-||..-. ...+.++..... ....
T Consensus 73 ~~a~ri~Y~std~~G~p~~~~gtv~~P~~~~----~~~pvvs~~hgt~g~----~~~CaPS~~~~~~~~~~~~~~~~~e~ 144 (462)
T 3guu_A 73 AASFQLQYRTTNTQNEAVADVATVWIPAKPA----SPPKIFSYQVYEDAT----ALDCAPSYSYLTGLDQPNKVTAVLDT 144 (462)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEEECSSCC----SSCEEEEEECCCCCC----SGGGCHHHHHBSCSCCTTGGGGSTHH
T ss_pred ceEEEEEEEEECCCCCEEEEEEEEEecCCCC----CCCcEEEEeCCcccC----CCCcCCccccccCCCccccchhhhhH
Confidence 366677777764 53 4888999998732 247999999996321 111111100000 0011
Q ss_pred hHHHHH-HHCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC-
Q 005240 546 TSSLIF-LARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA- 623 (706)
Q Consensus 546 ~~~~~l-~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~- 623 (706)
.....| +++||+|+.+++. |.|..+.........+.|...++..+. +.-...+++++|+|+||..+++++...
T Consensus 145 ~~~~~~~l~~G~~Vv~~Dy~---G~G~~y~~~~~~~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~ 219 (462)
T 3guu_A 145 PIIIGWALQQGYYVVSSDHE---GFKAAFIAGYEEGMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAE 219 (462)
T ss_dssp HHHHHHHHHTTCEEEEECTT---TTTTCTTCHHHHHHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCC---CCCCcccCCcchhHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhCh
Confidence 234566 8999999997776 445554443222222334444433332 221247999999999999999988654
Q ss_pred ---CC-ceeEEEeccCCC
Q 005240 624 ---PH-LFCCGIARSGSY 637 (706)
Q Consensus 624 ---p~-~~~a~v~~~~~~ 637 (706)
|+ .++++++.++..
T Consensus 220 ~yapel~~~g~~~~~~p~ 237 (462)
T 3guu_A 220 SYAPELNIVGASHGGTPV 237 (462)
T ss_dssp HHCTTSEEEEEEEESCCC
T ss_pred hhcCccceEEEEEecCCC
Confidence 34 588888887653
No 292
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.02 E-value=7.9e-08 Score=97.61 Aligned_cols=184 Identities=10% Similarity=0.049 Sum_probs=111.7
Q ss_pred CCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhh
Q 005240 70 ETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDES 149 (706)
Q Consensus 70 ~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 149 (706)
.+.+.++|+..... ...+.|+|||+.|++...
T Consensus 33 ~~~~~~~l~~~~~~-----~egp~~~~~g~~l~~~d~------------------------------------------- 64 (305)
T 3dr2_A 33 GDARLLTLYDQATW-----SEGPAWWEAQRTLVWSDL------------------------------------------- 64 (305)
T ss_dssp TTCCCEEEECCCSS-----EEEEEEEGGGTEEEEEET-------------------------------------------
T ss_pred CCCceEEEecCCcC-----ccCCeEeCCCCEEEEEEC-------------------------------------------
Confidence 45566677644332 468899999998887632
Q ss_pred hhhhcccceEEEEccCCCceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCC
Q 005240 150 LFDYYTTAQLVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP 228 (706)
Q Consensus 150 ~~~~~~~~~l~~~~l~g~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 228 (706)
....|++++.+|+.+.+... .....++++|||+.++ .... ...|.+++.++ +.+.+....
T Consensus 65 -----~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v-~~~~------------~~~v~~~~~~g-~~~~~~~~~ 125 (305)
T 3dr2_A 65 -----VGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVH-CEHG------------RRAITRSDADG-QAHLLVGRY 125 (305)
T ss_dssp -----TTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEE-EETT------------TTEEEEECTTS-CEEEEECEE
T ss_pred -----CCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEE-EECC------------CCEEEEECCCC-CEEEEEecc
Confidence 12578888887765555444 5677899999998443 3322 13788999874 455554321
Q ss_pred CCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCC------CCccccCccceeeeecCCCCCCCCceEEeecccccc
Q 005240 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG------DANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFR 302 (706)
Q Consensus 229 ~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~------~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 302 (706)
.. .+. ..+..+.++|||+ |++....-+. ...........||++|. ++++.+.+. ......
T Consensus 126 ~~--~~~------~~~~~i~~d~dG~--l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~---~~g~~~~~~-~~~~p~ 191 (305)
T 3dr2_A 126 AG--KRL------NSPNDLIVARDGA--IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP---DGSPLQRMA-DLDHPN 191 (305)
T ss_dssp TT--EEC------SCCCCEEECTTSC--EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS---SSCCCEEEE-EESSEE
T ss_pred CC--Ccc------CCCCCEEECCCCC--EEEeCcCCCccccccccccccccCCCeEEEEcC---CCCcEEEEe-cCCCCc
Confidence 10 000 1234789999997 6654210000 00000112346899987 677877776 444556
Q ss_pred cceecCCCceEEEEeecc--ccceEEEEEcCCCC
Q 005240 303 SVSWCDDSLALVNETWYK--TSQTRTWLVCPGSK 334 (706)
Q Consensus 303 ~~~wspDg~~l~~~~~~~--~~~~~l~~~d~~~~ 334 (706)
.++|+|||+.|++..... .....|++++++++
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 789999999888764321 01357999888763
No 293
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=99.01 E-value=4.7e-10 Score=122.64 Aligned_cols=132 Identities=17% Similarity=0.172 Sum_probs=91.4
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHH-HCCeEEEEcCCC-Cc
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFL-ARRFAVLAGPSI-PI 566 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~~-~~ 566 (706)
+.|...+ -+|.|... . .++|+||++|||++..|+..... .....|+ +.|++|+..+|| +.
T Consensus 91 sedcl~l--nv~~P~~~-~---~~~Pv~v~iHGG~~~~g~~~~~~------------~~~~~la~~~~~vvv~~nYRlg~ 152 (537)
T 1ea5_A 91 SEDCLYL--NIWVPSPR-P---KSTTVMVWIYGGGFYSGSSTLDV------------YNGKYLAYTEEVVLVSLSYRVGA 152 (537)
T ss_dssp CSCCCEE--EEEECSSC-C---SSEEEEEEECCSTTTCCCTTCGG------------GCTHHHHHHHTCEEEECCCCCHH
T ss_pred CCcCCeE--EEeccCCC-C---CCCeEEEEECCCcccCCCCCCCc------------cChHHHHhcCCEEEEEeccCccc
Confidence 4577555 46788753 1 24899999999987543221110 1234566 689999998888 33
Q ss_pred CCCCCC-CCchhhHHHHHHHHHHHHHHHHHc--CC-CCCCcEEEEEechHHHHHHHHHHh--CCCceeEEEeccCCCC
Q 005240 567 IGEGDK-LPNDRFVEQLVSSAEAAVEEVVRR--GV-ADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSYN 638 (706)
Q Consensus 567 ~g~g~~-~~~~~~~~~~~~D~~~~~~~l~~~--~~-id~~~i~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~d 638 (706)
.|+... ......++..+.|+..|++|++++ .+ .||+||.|+|+|+||++++.++.. ...+|+++|+.+|...
T Consensus 153 ~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 230 (537)
T 1ea5_A 153 FGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 230 (537)
T ss_dssp HHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred cccccCCCCCCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCcc
Confidence 344322 111112334589999999999986 22 799999999999999999988875 2368999999999754
No 294
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.01 E-value=5.9e-08 Score=98.14 Aligned_cols=233 Identities=9% Similarity=0.049 Sum_probs=133.7
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~ 112 (706)
...|.|+|+++.|+++. .....|+++++++++.+.+.. +. .+..+.++|||++ ++...
T Consensus 15 ~Egp~w~~~~~~l~~~d---------~~~~~i~~~d~~~~~~~~~~~-~~-----~~~~i~~~~dG~l-~v~~~------ 72 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVD---------IPAKKVCRWDSFTKQVQRVTM-DA-----PVSSVALRQSGGY-VATIG------ 72 (297)
T ss_dssp EEEEEEETTTTEEEEEE---------TTTTEEEEEETTTCCEEEEEC-SS-----CEEEEEEBTTSSE-EEEET------
T ss_pred ccCCeEECCCCEEEEEE---------CCCCEEEEEECCCCcEEEEeC-CC-----ceEEEEECCCCCE-EEEEC------
Confidence 44799999999998864 334789999999887655432 22 2678899999994 43321
Q ss_pred CCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCC------ceEeeeeeCCC
Q 005240 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP------AVYTAVEPSPD 185 (706)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~------~~~~~~~~SpD 185 (706)
..|+++++ +|+.+.+... .....++++||
T Consensus 73 --------------------------------------------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d 108 (297)
T 3g4e_A 73 --------------------------------------------TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA 108 (297)
T ss_dssp --------------------------------------------TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT
T ss_pred --------------------------------------------CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC
Confidence 46788887 4554444221 34667899999
Q ss_pred CcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccC
Q 005240 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (706)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~ 265 (706)
|+ |++.......... ........|+.++.++.. ..+.... ..+..++|+||++. ||++...
T Consensus 109 G~-l~~~~~~~~~~~~-~~~~~~~~l~~~d~~g~~-~~~~~~~-------------~~pngi~~spdg~~-lyv~~~~-- 169 (297)
T 3g4e_A 109 GR-YFAGTMAEETAPA-VLERHQGALYSLFPDHHV-KKYFDQV-------------DISNGLDWSLDHKI-FYYIDSL-- 169 (297)
T ss_dssp SC-EEEEEEECCSBTT-BCCTTCEEEEEECTTSCE-EEEEEEE-------------SBEEEEEECTTSCE-EEEEEGG--
T ss_pred CC-EEEecCCcccccc-cccCCCcEEEEEECCCCE-EEEeecc-------------ccccceEEcCCCCE-EEEecCC--
Confidence 98 6665543211000 000012467777776543 3332211 11236799999997 7766321
Q ss_pred CCCccccCccceeeeecCCCCCCCCce---EEee---cccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCce
Q 005240 266 GDANVEVSPRDIIYTQPAEPAEGEKPE---ILHK---LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPR 339 (706)
Q Consensus 266 ~~~~~~~~~~~~l~~~d~~~~~~~~~~---~l~~---~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~ 339 (706)
...|++++.++ +++.+. .+.. .......+++.+||. |+++.. ....|+++|++++ +..
T Consensus 170 ---------~~~i~~~~~d~-~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~---~~~~v~~~d~~tG--~~~ 233 (297)
T 3g4e_A 170 ---------SYSVDAFDYDL-QTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACY---NGGRVIRLDPVTG--KRL 233 (297)
T ss_dssp ---------GTEEEEEEECT-TTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEE---TTTEEEEECTTTC--CEE
T ss_pred ---------CCcEEEEeccC-CCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEc---CCCEEEEEcCCCc--eEE
Confidence 12467776521 344432 2222 124456778899996 443322 2246999999864 233
Q ss_pred eeecCcccccccCCCCCceEec-cCCCEEEEeee
Q 005240 340 VLFDRVFENVYSDPGSPMMTRT-STGTNVIAKIK 372 (706)
Q Consensus 340 ~l~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~ 372 (706)
......... ...+.|+ ||++.|+++..
T Consensus 234 ~~i~~p~~~------~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 234 QTVKLPVDK------TTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEECSSSB------EEEEEEESGGGCEEEEEEB
T ss_pred EEEECCCCC------ceEEEEeCCCCCEEEEEcC
Confidence 222221111 1235666 88888877753
No 295
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.00 E-value=1e-08 Score=103.60 Aligned_cols=112 Identities=18% Similarity=0.120 Sum_probs=79.8
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..+....+- . -|.||++||.+.. ...+. ..+..|++. |.|+..+.+ |+
T Consensus 17 ~~g~~l~~~~~g-------~---~~~vv~lHG~~~~-----------~~~~~----~~~~~L~~~-~~vi~~D~~---G~ 67 (301)
T 3kda_A 17 VDGVKLHYVKGG-------Q---GPLVMLVHGFGQT-----------WYEWH----QLMPELAKR-FTVIAPDLP---GL 67 (301)
T ss_dssp ETTEEEEEEEEE-------S---SSEEEEECCTTCC-----------GGGGT----TTHHHHTTT-SEEEEECCT---TS
T ss_pred eCCeEEEEEEcC-------C---CCEEEEECCCCcc-----------hhHHH----HHHHHHHhc-CeEEEEcCC---CC
Confidence 378888866653 1 2679999997521 11221 345667777 999986665 45
Q ss_pred CCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 570 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSR-IAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 570 g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~-i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
|.+... ........+|+.++++.+ +.++ +.++||||||.+++.++.++|++++++|..++.
T Consensus 68 G~S~~~~~~~~~~~~~~~l~~~l~~l------~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 131 (301)
T 3kda_A 68 GQSEPPKTGYSGEQVAVYLHKLARQF------SPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAP 131 (301)
T ss_dssp TTCCCCSSCSSHHHHHHHHHHHHHHH------CSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSC
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHc------CCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccC
Confidence 555332 234566677777777765 2356 999999999999999999999999999999985
No 296
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=98.99 E-value=1.8e-09 Score=112.34 Aligned_cols=85 Identities=15% Similarity=0.057 Sum_probs=66.5
Q ss_pred hHHHHHHHCCeEEEEcCCCCcCCCCCCCCc---------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHH
Q 005240 546 TSSLIFLARRFAVLAGPSIPIIGEGDKLPN---------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMT 616 (706)
Q Consensus 546 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---------~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a 616 (706)
..+..|++.||.|+..+.+| +|.+... .......++|+.++++++.++ .+.+++.++|||+||+++
T Consensus 84 ~~~~~l~~~g~~v~~~d~~G---~G~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a 158 (354)
T 2rau_A 84 SIVLYLARNGFNVYTIDYRT---HYVPPFLKDRQLSFTANWGWSTWISDIKEVVSFIKRD--SGQERIYLAGESFGGIAA 158 (354)
T ss_dssp CHHHHHHHTTEEEEEEECGG---GGCCTTCCGGGGGGGTTCSHHHHHHHHHHHHHHHHHH--HCCSSEEEEEETHHHHHH
T ss_pred hHHHHHHhCCCEEEEecCCC---CCCCCcccccccccccCCcHHHHHHHHHHHHHHHHHh--cCCceEEEEEECHhHHHH
Confidence 35677888999999977653 4444321 112366788999999999876 345789999999999999
Q ss_pred HHHHHhC-CCceeEEEeccC
Q 005240 617 AHLLAHA-PHLFCCGIARSG 635 (706)
Q Consensus 617 ~~~~~~~-p~~~~a~v~~~~ 635 (706)
+.++.++ |++++++|+.++
T Consensus 159 ~~~a~~~~p~~v~~lvl~~~ 178 (354)
T 2rau_A 159 LNYSSLYWKNDIKGLILLDG 178 (354)
T ss_dssp HHHHHHHHHHHEEEEEEESC
T ss_pred HHHHHhcCccccceEEEecc
Confidence 9999998 999999999854
No 297
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.99 E-value=9.2e-08 Score=96.88 Aligned_cols=235 Identities=9% Similarity=0.037 Sum_probs=136.2
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCc----eeecccCC
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE----AKPLFESP 81 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~----~~~lt~~~ 81 (706)
.|.|+++.. ++...... .....+..+.|||||+.|+.... + ..+.++++.... ...+....
T Consensus 40 ~v~vw~~~~----~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--------d--g~i~~~~~~~~~~~~~~~~~~~~~ 104 (313)
T 3odt_A 40 TVRLWSKDD----QWLGTVVY-TGQGFLNSVCYDSEKELLLFGGK--------D--TMINGVPLFATSGEDPLYTLIGHQ 104 (313)
T ss_dssp EEEEEEESS----SEEEEEEE-ECSSCEEEEEEETTTTEEEEEET--------T--SCEEEEETTCCTTSCC-CEECCCS
T ss_pred cEEEEECCC----CEEEEEee-cCCccEEEEEECCCCCEEEEecC--------C--CeEEEEEeeecCCCCcccchhhcc
Confidence 588888865 54333321 12335889999999999988653 3 455556654432 12222111
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 82 ~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
. .+..+.| +++.|+..+.+ +.|.+
T Consensus 105 ~-----~i~~~~~--~~~~l~~~~~d-------------------------------------------------~~i~~ 128 (313)
T 3odt_A 105 G-----NVCSLSF--QDGVVISGSWD-------------------------------------------------KTAKV 128 (313)
T ss_dssp S-----CEEEEEE--ETTEEEEEETT-------------------------------------------------SEEEE
T ss_pred c-----CEEEEEe--cCCEEEEEeCC-------------------------------------------------CCEEE
Confidence 1 2556677 66777765421 45666
Q ss_pred EccCC-CceecCCC-ceEeeeeeCC-CCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccC
Q 005240 162 GSLDG-TAKDFGTP-AVYTAVEPSP-DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (706)
Q Consensus 162 ~~l~g-~~~~lt~~-~~~~~~~~Sp-DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~ 238 (706)
++ .+ ....+... ..+..+.|+| +++.|+..+.. ..+.+|+.. ...+.+.....
T Consensus 129 ~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------------~~i~i~d~~-~~~~~~~~~~~--------- 184 (313)
T 3odt_A 129 WK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASAD-------------KTIKLWQND-KVIKTFSGIHN--------- 184 (313)
T ss_dssp EE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETT-------------SCEEEEETT-EEEEEECSSCS---------
T ss_pred Ec-CCcEEEecccCCCceeEEEEccCCCCEEEEEECC-------------CCEEEEecC-ceEEEEeccCc---------
Confidence 66 33 33333333 5677888888 88888766543 378899833 22333322110
Q ss_pred ccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-EEeecccccccceecCCCceEEEEe
Q 005240 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNET 317 (706)
Q Consensus 239 ~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~~~~wspDg~~l~~~~ 317 (706)
..+..+.|+|++. ++... ....|.++|+ ..++.. .+......+..+.|+||++ |+..+
T Consensus 185 ---~~i~~~~~~~~~~--~~~~~------------~dg~i~i~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~ 243 (313)
T 3odt_A 185 ---DVVRHLAVVDDGH--FISCS------------NDGLIKLVDM---HTGDVLRTYEGHESFVYCIKLLPNGD-IVSCG 243 (313)
T ss_dssp ---SCEEEEEEEETTE--EEEEE------------TTSEEEEEET---TTCCEEEEEECCSSCEEEEEECTTSC-EEEEE
T ss_pred ---ccEEEEEEcCCCe--EEEcc------------CCCeEEEEEC---CchhhhhhhhcCCceEEEEEEecCCC-EEEEe
Confidence 1244789999987 43221 1225888888 444443 4455677889999999994 55543
Q ss_pred eccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEE
Q 005240 318 WYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVI 368 (706)
Q Consensus 318 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~ 368 (706)
....|.++|+.++ +........... ...+.|+|+|+.++
T Consensus 244 ----~dg~v~iwd~~~~--~~~~~~~~~~~~------i~~~~~~~~~~~~~ 282 (313)
T 3odt_A 244 ----EDRTVRIWSKENG--SLKQVITLPAIS------IWSVDCMSNGDIIV 282 (313)
T ss_dssp ----TTSEEEEECTTTC--CEEEEEECSSSC------EEEEEECTTSCEEE
T ss_pred ----cCCEEEEEECCCC--ceeEEEeccCce------EEEEEEccCCCEEE
Confidence 2345888888874 333332222111 22477899998543
No 298
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=98.99 E-value=5.9e-10 Score=121.42 Aligned_cols=133 Identities=17% Similarity=0.148 Sum_probs=91.2
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHH--HHCCeEEEEcCCC-C
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIF--LARRFAVLAGPSI-P 565 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~G~~v~~~~~~-~ 565 (706)
+.|. +...+|.|.....+ .++|+||++|||++..++. ..+. ...+. +..|++|+..+|| +
T Consensus 82 ~edc--l~l~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~~--------~~~~-----~~~~~~~~~~g~vvv~~nYRlg 144 (522)
T 1ukc_A 82 SEDC--LFINVFKPSTATSQ--SKLPVWLFIQGGGYAENSN--------ANYN-----GTQVIQASDDVIVFVTFNYRVG 144 (522)
T ss_dssp ESCC--CEEEEEEETTCCTT--CCEEEEEEECCSTTTSCCS--------CSCC-----CHHHHHHTTSCCEEEEECCCCH
T ss_pred CCcC--CEEEEEECCCCCCC--CCCCEEEEECCCccccCCc--------cccC-----cHHHHHhcCCcEEEEEeccccc
Confidence 4566 45568889764332 2589999999998754221 1111 11222 2469999998888 4
Q ss_pred cCCCCCCCCch--hhHHHHHHHHHHHHHHHHHcC--C-CCCCcEEEEEechHHHHHHHHHHhC----CCceeEEEeccCC
Q 005240 566 IIGEGDKLPND--RFVEQLVSSAEAAVEEVVRRG--V-ADPSRIAVGGHSYGAFMTAHLLAHA----PHLFCCGIARSGS 636 (706)
Q Consensus 566 ~~g~g~~~~~~--~~~~~~~~D~~~~~~~l~~~~--~-id~~~i~i~G~S~GG~~a~~~~~~~----p~~~~a~v~~~~~ 636 (706)
..|++...... ...+..+.|+.+|++|++++. + .||+||.|+|+|+||++++.++... +.+|+++|+.+|.
T Consensus 145 ~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~ 224 (522)
T 1ukc_A 145 ALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSF 224 (522)
T ss_dssp HHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCC
T ss_pred ccccccchhccccCCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCC
Confidence 44554321110 123556899999999998852 2 7999999999999999988877653 5789999999987
Q ss_pred CC
Q 005240 637 YN 638 (706)
Q Consensus 637 ~d 638 (706)
+.
T Consensus 225 ~~ 226 (522)
T 1ukc_A 225 WP 226 (522)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 299
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.98 E-value=3.2e-10 Score=124.41 Aligned_cols=134 Identities=17% Similarity=0.148 Sum_probs=89.9
Q ss_pred ccCCeEEEEEEEec-----CCCCCCCC--CCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEc
Q 005240 489 RKDGVPLTATLYLP-----PGYDQSKD--GPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (706)
Q Consensus 489 ~~dg~~i~~~l~~P-----~~~~~~~~--~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (706)
+.|. +..-+|.| .. ...++ .++|+||++|||++..++..... .....|++.|++|+..
T Consensus 87 ~edc--L~lnv~~P~~~~~~~-~~~~~~~~~~Pviv~iHGGg~~~g~~~~~~------------~~~~~l~~~g~vvv~~ 151 (551)
T 2fj0_A 87 SEAC--IHANIHVPYYALPRD-AADKNRFAGLPVLVFIHGGGFAFGSGDSDL------------HGPEYLVSKDVIVITF 151 (551)
T ss_dssp CSCC--CEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTT------------CBCTTGGGGSCEEEEE
T ss_pred CCCC--eEEEEEecCcccccc-ccccCcCCCCCEEEEEcCCccccCCCcccc------------cCHHHHHhCCeEEEEe
Confidence 4465 44557788 32 11111 12899999999987543321110 1224567799999998
Q ss_pred CCCCc-CCCCCCCCchhhHHHHHHHHHHHHHHHHHcC--C-CCCCcEEEEEechHHHHHHHHHHh--CCCceeEEEeccC
Q 005240 562 PSIPI-IGEGDKLPNDRFVEQLVSSAEAAVEEVVRRG--V-ADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSG 635 (706)
Q Consensus 562 ~~~~~-~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~--~-id~~~i~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~ 635 (706)
++|.. .|+..........+..+.|+..|++|++++. + .|++||.|+|+|+||++++.++.. .+.+|+++|+.+|
T Consensus 152 nYRl~~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg 231 (551)
T 2fj0_A 152 NYRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSG 231 (551)
T ss_dssp CCCCHHHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESC
T ss_pred CCcCCccccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecC
Confidence 88843 2443221111123455899999999998862 3 799999999999999999999876 3578999999998
Q ss_pred CC
Q 005240 636 SY 637 (706)
Q Consensus 636 ~~ 637 (706)
..
T Consensus 232 ~~ 233 (551)
T 2fj0_A 232 TS 233 (551)
T ss_dssp CT
T ss_pred Cc
Confidence 64
No 300
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.98 E-value=4.8e-08 Score=98.85 Aligned_cols=223 Identities=8% Similarity=-0.049 Sum_probs=124.3
Q ss_pred ceEEEEccCC-CceecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCc
Q 005240 157 AQLVLGSLDG-TAKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPV 235 (706)
Q Consensus 157 ~~l~~~~l~g-~~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~ 235 (706)
..|++++.++ +.+.+.....+..++++|||+ |++.. . ..|++++.++++.+.+...... .+.
T Consensus 35 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~-l~v~~-~-------------~~l~~~d~~~g~~~~~~~~~~~--~~~ 97 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMDAPVSSVALRQSGG-YVATI-G-------------TKFCALNWKEQSAVVLATVDND--KKN 97 (297)
T ss_dssp TEEEEEETTTCCEEEEECSSCEEEEEEBTTSS-EEEEE-T-------------TEEEEEETTTTEEEEEEECCTT--CSS
T ss_pred CEEEEEECCCCcEEEEeCCCceEEEEECCCCC-EEEEE-C-------------CeEEEEECCCCcEEEEEecCCC--CCC
Confidence 6899999854 555444446678899999999 44433 2 3789999998877776554211 010
Q ss_pred ccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEE
Q 005240 236 CYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVN 315 (706)
Q Consensus 236 ~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~ 315 (706)
.....+.++|||+ |++..................||+++. + ++...+.........+.|+|||+.|++
T Consensus 98 ------~~~~di~~d~dG~--l~~~~~~~~~~~~~~~~~~~~l~~~d~---~-g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 98 ------NRFNDGKVDPAGR--YFAGTMAEETAPAVLERHQGALYSLFP---D-HHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp ------EEEEEEEECTTSC--EEEEEEECCSBTTBCCTTCEEEEEECT---T-SCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred ------CCCCCEEECCCCC--EEEecCCcccccccccCCCcEEEEEEC---C-CCEEEEeeccccccceEEcCCCCEEEE
Confidence 1234678999997 665432221110001112346888876 3 455555444445567899999998887
Q ss_pred EeeccccceEEEEEcC--CCCCCC-ceeeecCcccccccCCCCC-ceEeccCCCEEEEeeeccCCcceEEEEecCCCCCC
Q 005240 316 ETWYKTSQTRTWLVCP--GSKDVA-PRVLFDRVFENVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPE 391 (706)
Q Consensus 316 ~~~~~~~~~~l~~~d~--~~~~~~-~~~l~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~ 391 (706)
... ...+|+++++ .++... .+.+.+... .++.+ .+..+++|. |++....
T Consensus 166 ~~~---~~~~i~~~~~d~~~G~~~~~~~~~~~~~-----~~~~p~g~~~d~~G~-lwva~~~------------------ 218 (297)
T 3g4e_A 166 IDS---LSYSVDAFDYDLQTGQISNRRSVYKLEK-----EEQIPDGMCIDAEGK-LWVACYN------------------ 218 (297)
T ss_dssp EEG---GGTEEEEEEECTTTCCEEEEEEEEECCG-----GGCEEEEEEEBTTSC-EEEEEET------------------
T ss_pred ecC---CCCcEEEEeccCCCCcccCcEEEEECCC-----CCCCCCeeEECCCCC-EEEEEcC------------------
Confidence 642 2345777765 342211 112211110 00111 244567764 3333210
Q ss_pred CCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecc-cCCCEEEEEEecC
Q 005240 392 GNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDIN-LNQLKILTSKESK 448 (706)
Q Consensus 392 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s-~Dg~~l~~~~~~~ 448 (706)
...|.++|+++|+....+..+.. .+ ....|+ ||+++|+.+....
T Consensus 219 --~~~v~~~d~~tG~~~~~i~~p~~----~~-------t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 219 --GGRVIRLDPVTGKRLQTVKLPVD----KT-------TSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp --TTEEEEECTTTCCEEEEEECSSS----BE-------EEEEEESGGGCEEEEEEBCT
T ss_pred --CCEEEEEcCCCceEEEEEECCCC----Cc-------eEEEEeCCCCCEEEEEcCCc
Confidence 11377889888876555443311 11 246788 8888877776554
No 301
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=98.98 E-value=1.2e-08 Score=106.23 Aligned_cols=118 Identities=16% Similarity=0.125 Sum_probs=83.5
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..++....-|++ + ..|.||++||.+.. ...+ ...+..|++.||.|+..+.+ |+
T Consensus 10 ~~g~~l~y~~~G~~~--~----~~~~vv~~hG~~~~-----------~~~~----~~~~~~l~~~g~~vi~~d~~---g~ 65 (356)
T 2e3j_A 10 CRGTRIHAVADSPPD--Q----QGPLVVLLHGFPES-----------WYSW----RHQIPALAGAGYRVVAIDQR---GY 65 (356)
T ss_dssp ETTEEEEEEEECCTT--C----CSCEEEEECCTTCC-----------GGGG----TTTHHHHHHTTCEEEEECCT---TS
T ss_pred cCCeEEEEEEecCCC--C----CCCEEEEECCCCCc-----------HHHH----HHHHHHHHHcCCEEEEEcCC---CC
Confidence 478899988887653 1 13688999997421 1112 13466788899999996665 45
Q ss_pred CCCCCc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 570 GDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 570 g~~~~~----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
|.+... ........+|+.++++.+ +.+++.++|||+||++++.++.++|++++++|+.++..
T Consensus 66 g~s~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 66 GRSSKYRVQKAYRIKELVGDVVGVLDSY------GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp TTSCCCCSGGGGSHHHHHHHHHHHHHHT------TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHc------CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 544332 123455667777766654 45789999999999999999999999999999887644
No 302
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.97 E-value=3.5e-08 Score=100.80 Aligned_cols=227 Identities=14% Similarity=0.104 Sum_probs=126.4
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceee---cccCCCccccccccceEEec--CCcEEEEEec
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP---LFESPDICLNAVFGSFVWVN--NSTLLIFTIP 106 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~---lt~~~~~~~~~~~~~~~wSp--Dg~~l~~~~~ 106 (706)
.+..++|||||++||..+. + ..|.++|+.+++... +..+.. .+..+.|+| +|++|+..+.
T Consensus 15 ~V~~v~~s~~g~~lasgs~--------D--~~v~lwd~~~~~~~~~~~l~gH~~-----~V~~v~~~~~~~~~~l~s~s~ 79 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSS--------D--RSVKIFDVRNGGQILIADLRGHEG-----PVWQVAWAHPMYGNILASCSY 79 (316)
T ss_dssp CEEEEEECGGGCEEEEEET--------T--TEEEEEEEETTEEEEEEEEECCSS-----CEEEEEECCGGGSSCEEEEET
T ss_pred eEEEeeEcCCCCEEEEEeC--------C--CeEEEEEecCCCcEEEEEEcCCCc-----cEEEEEeCCCCCCCEEEEEEC
Confidence 5788999999999987653 3 455666666654322 222222 377889986 4887776642
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCce---ecCCC-ceEeeee
Q 005240 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK---DFGTP-AVYTAVE 181 (706)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~---~lt~~-~~~~~~~ 181 (706)
+ ..|.++++ +++.. .+... ..+..++
T Consensus 80 D-------------------------------------------------~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~ 110 (316)
T 3bg1_A 80 D-------------------------------------------------RKVIIWREENGTWEKSHEHAGHDSSVNSVC 110 (316)
T ss_dssp T-------------------------------------------------SCEEEECCSSSCCCEEEEECCCSSCCCEEE
T ss_pred C-------------------------------------------------CEEEEEECCCCcceEEEEccCCCCceEEEE
Confidence 1 45666777 44322 22223 5678999
Q ss_pred eCCC--CcEEEEEeeccCcccccccccccceEEEEecCCCe-eEEcccCCCCCCCCcccCccCCCCcceeeecCCC----
Q 005240 182 PSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKP---- 254 (706)
Q Consensus 182 ~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~---- 254 (706)
|+|| |+.|+..+.+ ..|.+|++.++. ........... .....+.|+|++.
T Consensus 111 ~~p~~~g~~lasgs~D-------------~~i~lwd~~~~~~~~~~~~~~~h~----------~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 111 WAPHDYGLILACGSSD-------------GAISLLTYTGEGQWEVKKINNAHT----------IGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp ECCTTTCSCEEEECSS-------------SCEEEEEECSSSCEEECCBTTSSS----------SCBCCCEECCCCCC---
T ss_pred ECCCCCCcEEEEEcCC-------------CCEEEEecCCCCCcceeeeecccc----------CCcceEEEccccCCccc
Confidence 9998 7777655443 378899987542 21111111110 1234678888742
Q ss_pred ------------ceEEEEEeccCCCCccccCccceeeeecCCCCCCC-Cce---EEeecccccccceecCCC----ceEE
Q 005240 255 ------------STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE-KPE---ILHKLDLRFRSVSWCDDS----LALV 314 (706)
Q Consensus 255 ------------~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~~~---~l~~~~~~~~~~~wspDg----~~l~ 314 (706)
..|+ . . .....|.+||+ ..+ ..+ .+..+...+..+.|+|++ ..|+
T Consensus 168 ~~~~~~~~~~~~~~l~-s---g--------s~D~~v~lWd~---~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~la 232 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFA-S---G--------GCDNLIKLWKE---EEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIA 232 (316)
T ss_dssp ---CCSCCCCCCCBEE-C---C--------BTTSBCCEEEE---CTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEE
T ss_pred cccccccCccccceEE-E---e--------cCCCeEEEEEe---CCCCccceeeecccCCCceEEEEecCCCCCCCceEE
Confidence 1021 1 1 11224677777 322 222 234456678899999997 5666
Q ss_pred EEeeccccceEEEEEcCCCC---CCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 315 NETWYKTSQTRTWLVCPGSK---DVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 315 ~~~~~~~~~~~l~~~d~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
..+. ++..+|| ++.+. ......+... ......+.|+|+|++|+...
T Consensus 233 s~s~--D~~v~iw--~~~~~~~~~~~~~~~~~~-------~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 233 SCSQ--DGRVFIW--TCDDASSNTWSPKLLHKF-------NDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp EEET--TCEEEEE--ECSSTTCCCCBCCEEEEC-------SSCEEEEEECTTTCCEEEEE
T ss_pred EEcC--CCeEEEE--EccCccccchhhhhhhcC-------CCcEEEEEEcCCCCEEEEEc
Confidence 5542 2344455 44431 1111222111 01123478999999887664
No 303
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=98.97 E-value=6e-09 Score=102.71 Aligned_cols=114 Identities=18% Similarity=0.125 Sum_probs=73.4
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (706)
+|..++....-+ + .|.||++||.+.. +...+ ...+..|++.||.|++.+.+ |+|
T Consensus 10 ~g~~l~~~~~g~-----~----~~~vvllHG~~~~----------~~~~~----~~~~~~l~~~g~~vi~~D~~---G~G 63 (254)
T 2ocg_A 10 NGVQLHYQQTGE-----G----DHAVLLLPGMLGS----------GETDF----GPQLKNLNKKLFTVVAWDPR---GYG 63 (254)
T ss_dssp TTEEEEEEEEEC-----C----SEEEEEECCTTCC----------HHHHC----HHHHHHSCTTTEEEEEECCT---TST
T ss_pred CCEEEEEEEecC-----C----CCeEEEECCCCCC----------Cccch----HHHHHHHhhCCCeEEEECCC---CCC
Confidence 677777554421 1 2568889995310 01111 13456677789999996665 455
Q ss_pred CCCCch-----hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 571 DKLPND-----RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 571 ~~~~~~-----~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
.+.... ......++|+ ++++.+. +..++.++||||||.+++.++.++|++++++|+.++.
T Consensus 64 ~S~~~~~~~~~~~~~~~~~~~---~~~l~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 128 (254)
T 2ocg_A 64 HSRPPDRDFPADFFERDAKDA---VDLMKAL---KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGAN 128 (254)
T ss_dssp TCCSSCCCCCTTHHHHHHHHH---HHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred CCCCCCCCCChHHHHHHHHHH---HHHHHHh---CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccc
Confidence 543221 1133334444 4444443 3468999999999999999999999999999988764
No 304
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=98.97 E-value=1.7e-09 Score=107.14 Aligned_cols=100 Identities=18% Similarity=0.117 Sum_probs=69.5
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCC----c--hhhHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLP----N--DRFVEQLVSSA 586 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~----~--~~~~~~~~~D~ 586 (706)
.|+||++||.+.. ...+. ..+..|++ ||.|+..+.+ |+|.+.. . ........+|+
T Consensus 20 ~p~vv~~HG~~~~-----------~~~~~----~~~~~l~~-g~~v~~~D~~---G~G~S~~~~~~~~~~~~~~~~~~~~ 80 (269)
T 4dnp_A 20 ERVLVLAHGFGTD-----------QSAWN----RILPFFLR-DYRVVLYDLV---CAGSVNPDFFDFRRYTTLDPYVDDL 80 (269)
T ss_dssp SSEEEEECCTTCC-----------GGGGT----TTGGGGTT-TCEEEEECCT---TSTTSCGGGCCTTTCSSSHHHHHHH
T ss_pred CCEEEEEeCCCCc-----------HHHHH----HHHHHHhC-CcEEEEEcCC---CCCCCCCCCCCccccCcHHHHHHHH
Confidence 3789999996421 11121 22344555 9999996665 4555532 1 11345566666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 587 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 587 ~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
.++++.+ +.+++.++|||+||++++.++.++|+++++++..++..
T Consensus 81 ~~~~~~~------~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 125 (269)
T 4dnp_A 81 LHILDAL------GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASP 125 (269)
T ss_dssp HHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred HHHHHhc------CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCC
Confidence 6666554 34689999999999999999999999999999999864
No 305
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=98.97 E-value=2.2e-09 Score=104.56 Aligned_cols=104 Identities=13% Similarity=0.105 Sum_probs=71.0
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc-hhhHHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVE 591 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~D~~~~~~ 591 (706)
.|+||++||.+.. ...+. ....|+ .||.|+..+.+ |+|.+... ........+|+..+++
T Consensus 16 ~~~vv~~hG~~~~-----------~~~~~-----~~~~l~-~g~~v~~~d~~---g~g~s~~~~~~~~~~~~~~~~~~~~ 75 (245)
T 3e0x_A 16 PNTLLFVHGSGCN-----------LKIFG-----ELEKYL-EDYNCILLDLK---GHGESKGQCPSTVYGYIDNVANFIT 75 (245)
T ss_dssp SCEEEEECCTTCC-----------GGGGT-----TGGGGC-TTSEEEEECCT---TSTTCCSCCCSSHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCccc-----------HHHHH-----HHHHHH-hCCEEEEecCC---CCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 4789999997421 11111 122233 89999996665 44444332 2235566777777774
Q ss_pred HHHHcCCCCCCcEEEEEechHHHHHHHHHHh-CCCceeEEEeccCCCCC
Q 005240 592 EVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGSYNK 639 (706)
Q Consensus 592 ~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~-~p~~~~a~v~~~~~~d~ 639 (706)
+...+..++ ++.++|||+||.+++.++.+ +|+ ++++++.+|....
T Consensus 76 ~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~ 121 (245)
T 3e0x_A 76 NSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARF 121 (245)
T ss_dssp HCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBC
T ss_pred hhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCcc
Confidence 443333344 99999999999999999999 999 9999999987654
No 306
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=98.96 E-value=2e-09 Score=107.05 Aligned_cols=100 Identities=16% Similarity=0.107 Sum_probs=69.7
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc----hhhHHHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN----DRFVEQLVSSAEAA 589 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----~~~~~~~~~D~~~~ 589 (706)
|+||++||.+.. . ..+. .....|++ ||.|+..+.+ |+|.+... ........+|+...
T Consensus 24 ~~vv~~HG~~~~--------~---~~~~----~~~~~L~~-~~~vi~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~~~ 84 (278)
T 3oos_A 24 PPLCVTHLYSEY--------N---DNGN----TFANPFTD-HYSVYLVNLK---GCGNSDSAKNDSEYSMTETIKDLEAI 84 (278)
T ss_dssp SEEEECCSSEEC--------C---TTCC----TTTGGGGG-TSEEEEECCT---TSTTSCCCSSGGGGSHHHHHHHHHHH
T ss_pred CeEEEEcCCCcc--------h---HHHH----HHHHHhhc-CceEEEEcCC---CCCCCCCCCCcccCcHHHHHHHHHHH
Confidence 578999997421 1 1121 22345555 9999996665 45555432 12345556666665
Q ss_pred HHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 590 ~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
++.+ +.+++.++|||+||.+++.++.++|++++++|+.+|...
T Consensus 85 ~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 127 (278)
T 3oos_A 85 REAL------YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAAS 127 (278)
T ss_dssp HHHT------TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred HHHh------CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccc
Confidence 5544 346899999999999999999999999999999998765
No 307
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.96 E-value=6.6e-08 Score=99.41 Aligned_cols=217 Identities=12% Similarity=0.094 Sum_probs=118.3
Q ss_pred ceeEeecCCCCCCCCeeeeecCC---CCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCC-------cee
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYP---DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-------EAK 75 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g-------~~~ 75 (706)
.|.|.++.. +..+.+..+. ....+..++|||||+.||.... ++ .|.+++++.+ +..
T Consensus 35 ~i~lw~~~~----~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~--------D~--~v~iw~~~~~~~~~~~~~~~ 100 (330)
T 2hes_X 35 KIKLVSVKY----DDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF--------DS--TVSIWAKEESADRTFEMDLL 100 (330)
T ss_dssp CEEEEECSS----SCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET--------TS--CEEEEEC-------CCCEEE
T ss_pred EEEEEEecC----CCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC--------CC--cEEEEEcccCcCccccceeE
Confidence 578888865 4333332221 2235888999999999987653 44 4445555322 111
Q ss_pred e-cccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhc
Q 005240 76 P-LFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYY 154 (706)
Q Consensus 76 ~-lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 154 (706)
. +..+.. .+..+.|+|||++|+..+.+
T Consensus 101 ~~~~~h~~-----~V~~v~~sp~g~~las~s~D----------------------------------------------- 128 (330)
T 2hes_X 101 AIIEGHEN-----EVKGVAWSNDGYYLATCSRD----------------------------------------------- 128 (330)
T ss_dssp EEEC---------CEEEEEECTTSCEEEEEETT-----------------------------------------------
T ss_pred EEEcCCCC-----cEEEEEECCCCCEEEEEeCC-----------------------------------------------
Confidence 1 221222 37789999999998876531
Q ss_pred ccceEEEEcc-CC-C-c---eecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccC
Q 005240 155 TTAQLVLGSL-DG-T-A---KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL 227 (706)
Q Consensus 155 ~~~~l~~~~l-~g-~-~---~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 227 (706)
+.|.++++ .+ + . ..+... ..+..++|+|||+.|+..+.+ ..|.+|++..+..+.+...
T Consensus 129 --~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-------------~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 129 --KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-------------DTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp --SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-------------SCEEEEEEETTEEEEEEEE
T ss_pred --CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-------------CeEEEEECCCCCeeEEEEc
Confidence 45666666 22 1 1 223333 678899999999988765543 3688998865432222222
Q ss_pred CCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc------e---EEee-c
Q 005240 228 PPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP------E---ILHK-L 297 (706)
Q Consensus 228 ~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~------~---~l~~-~ 297 (706)
.+.. ..+..+.|+|++...++.....+ ..|.+|++ .++.. . .+.. +
T Consensus 194 ~~h~----------~~v~~~~~~~~~~~~~l~s~s~D-----------~~v~iw~~---~~~~~~~~~~~~~~~~~~~~h 249 (330)
T 2hes_X 194 NGHE----------GTVWSSDFDKTEGVFRLCSGSDD-----------STVRVWKY---MGDDEDDQQEWVCEAILPDVH 249 (330)
T ss_dssp CCCS----------SCEEEEEECCSSSSCEEEEEETT-----------SCEEEEEE---EEECTTSCEEEEEEEECCSCC
T ss_pred cCCC----------CcEEEEEecCCCCeeEEEEEeCC-----------CeEEEEEe---cCCCccccceeEEeeeccccc
Confidence 1111 12457789998532122221111 13556665 22110 1 1122 4
Q ss_pred ccccccceecCCCceEEEEeeccccceEEEEEc
Q 005240 298 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (706)
Q Consensus 298 ~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d 330 (706)
...+..+.|++++ .|+..+ .++..+||...
T Consensus 250 ~~~v~~v~~s~~~-~l~s~~--~dg~v~iw~~~ 279 (330)
T 2hes_X 250 KRQVYNVAWGFNG-LIASVG--ADGVLAVYEEV 279 (330)
T ss_dssp SSCEEEEEECTTS-CEEEEE--TTSCEEEEEEE
T ss_pred ccceEEEEEcCCC-EEEEEe--CCCEEEEEEcC
Confidence 5567889999776 455543 23455566543
No 308
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.96 E-value=8.6e-08 Score=102.66 Aligned_cols=196 Identities=11% Similarity=0.037 Sum_probs=113.6
Q ss_pred CcccceeeCC-CCCeEEEEeeccccccccCCceeEEEEEcCC---Ccee--ecc-cCCCccccccccceEEecCCcEEEE
Q 005240 31 AKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAET---GEAK--PLF-ESPDICLNAVFGSFVWVNNSTLLIF 103 (706)
Q Consensus 31 ~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~---g~~~--~lt-~~~~~~~~~~~~~~~wSpDg~~l~~ 103 (706)
..+..++||| ||++||.... + ..|.++++.+ +... .++ .+.. .+..+.|+||++.|+.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~--------d--g~v~vwd~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSD--------Q--GVIKIWNLKEIIVGEVYSSSLTYDCSS-----TVTQITMIPNFDAFAV 128 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEET--------T--SEEEEEEHHHHHTTCCCSCSEEEECSS-----CEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCCEEEEecC--------C--ceEEEeECcccccCcccceeeeccCCC-----CEEEEEEeCCCCEEEE
Confidence 3688999999 9999988653 3 4666677665 4311 111 1222 3778999999998887
Q ss_pred EecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc----CCCceecC-------
Q 005240 104 TIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL----DGTAKDFG------- 172 (706)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l----~g~~~~lt------- 172 (706)
.+.+ +.|.++++ +|+.....
T Consensus 129 ~s~d-------------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~ 159 (437)
T 3gre_A 129 SSKD-------------------------------------------------GQIIVLKVNHYQQESEVKFLNCECIRK 159 (437)
T ss_dssp EETT-------------------------------------------------SEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EeCC-------------------------------------------------CEEEEEEeccccCCceeeccccceeEE
Confidence 6531 23333333 22221111
Q ss_pred -------CCceEeeee--eCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccCC
Q 005240 173 -------TPAVYTAVE--PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVRE 242 (706)
Q Consensus 173 -------~~~~~~~~~--~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~ 242 (706)
....+..+. ++||++.|+..+.. ..|.+||+.+++. ..+...... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~h~-----------~ 215 (437)
T 3gre_A 160 INLKNFGKNEYAVRMRAFVNEEKSLLVALTNL-------------SRVIIFDIRTLERLQIIENSPRH-----------G 215 (437)
T ss_dssp EEGGGGSSCCCEEEEEEEECSSCEEEEEEETT-------------SEEEEEETTTCCEEEEEECCGGG-----------C
T ss_pred EEccCcccccCceEEEEEEcCCCCEEEEEeCC-------------CeEEEEeCCCCeeeEEEccCCCC-----------C
Confidence 112233333 67888888766543 3799999986544 333321000 1
Q ss_pred CCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceE-Ee-ecccccccc----eecCCCceEEEE
Q 005240 243 GMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI-LH-KLDLRFRSV----SWCDDSLALVNE 316 (706)
Q Consensus 243 g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~-l~-~~~~~~~~~----~wspDg~~l~~~ 316 (706)
.+..++|+|+++. |+... .+ +.|.+||+ ..++... +. .....+..+ .|+||++.|+..
T Consensus 216 ~v~~~~~s~~~~~-l~s~~-~d-----------g~i~iwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~ 279 (437)
T 3gre_A 216 AVSSICIDEECCV-LILGT-TR-----------GIIDIWDI---RFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGG 279 (437)
T ss_dssp CEEEEEECTTSCE-EEEEE-TT-----------SCEEEEET---TTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEE
T ss_pred ceEEEEECCCCCE-EEEEc-CC-----------CeEEEEEc---CCccEEEEEecCCCCceEEEEeccccCCCccEEEEE
Confidence 2457899999886 54321 11 24788888 4444332 22 334456666 566778877765
Q ss_pred eeccccceEEEEEcCCCC
Q 005240 317 TWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 317 ~~~~~~~~~l~~~d~~~~ 334 (706)
+ ....|.++|+.++
T Consensus 280 ~----~dg~i~iwd~~~~ 293 (437)
T 3gre_A 280 S----SKTFLTIWNFVKG 293 (437)
T ss_dssp S----TTEEEEEEETTTT
T ss_pred c----CCCcEEEEEcCCC
Confidence 4 2335777888764
No 309
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.95 E-value=1.4e-07 Score=95.20 Aligned_cols=231 Identities=11% Similarity=-0.004 Sum_probs=135.0
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
.|+..+.+. + .+.+.. + ......++++|||+.++.. .+...|++++.++|+.+.+........
T Consensus 51 ~i~~~~~~~----~-~~~~~~-~-~~~~~~l~~~~dg~l~v~~----------~~~~~i~~~d~~~g~~~~~~~~~~~~~ 113 (296)
T 3e5z_A 51 RTWAWSDDG----Q-LSPEMH-P-SHHQNGHCLNKQGHLIACS----------HGLRRLERQREPGGEWESIADSFEGKK 113 (296)
T ss_dssp EEEEEETTS----C-EEEEES-S-CSSEEEEEECTTCCEEEEE----------TTTTEEEEECSTTCCEEEEECEETTEE
T ss_pred EEEEEECCC----C-eEEEEC-C-CCCcceeeECCCCcEEEEe----------cCCCeEEEEcCCCCcEEEEeeccCCCC
Confidence 455556544 5 555542 2 2246788999999855432 334689999998888776643211110
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC
Q 005240 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (706)
Q Consensus 86 ~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~ 165 (706)
...+..+.++|||+. +++........ ..... .. ........||.++.+
T Consensus 114 ~~~~~~i~~d~~G~l-~vtd~~~g~~~-~~~~~-~~-----------------------------~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 114 LNSPNDVCLAPDGSL-WFSDPTYGIDK-PEEGY-GG-----------------------------EMELPGRWVFRLAPD 161 (296)
T ss_dssp CCCCCCEEECTTSCE-EEEECSHHHHC-GGGSS-CC-----------------------------CCCSSSCEEEEECTT
T ss_pred CCCCCCEEECCCCCE-EEECCcccccc-ccccc-cc-----------------------------cccCCCcEEEEECCC
Confidence 112457899999984 44311000000 00000 00 000012589999988
Q ss_pred CCceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC-CCee---EEcccCCCCCCCCcccCcc
Q 005240 166 GTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLV---RELCDLPPAEDIPVCYNSV 240 (706)
Q Consensus 166 g~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~---~~l~~~~~~~~~p~~~~~~ 240 (706)
|+.+.+... .....++|+|||+.| +.... ...|++|+++ .+.. +.+... ..
T Consensus 162 g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~------------~~~i~~~~~~~~g~~~~~~~~~~~--~~--------- 217 (296)
T 3e5z_A 162 GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTG------------DNATHRYCLNARGETEYQGVHFTV--EP--------- 217 (296)
T ss_dssp SCEEEEECCCSSEEEEEECTTSCEE-EEETT------------TTEEEEEEECSSSCEEEEEEEECC--SS---------
T ss_pred CCEEEeecCCCCCccEEECCCCCEE-EEeCC------------CCeEEEEEECCCCcCcCCCeEeeC--CC---------
Confidence 766666544 566789999999998 65543 2479999986 3333 222211 11
Q ss_pred CCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeeccccccccee-cCCCceEEEEeec
Q 005240 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSW-CDDSLALVNETWY 319 (706)
Q Consensus 241 ~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~w-spDg~~l~~~~~~ 319 (706)
..+..+.+++||+ |++.. . ..|++++. ++.....+..... ...+.| +||++.|+.++.
T Consensus 218 -~~p~~i~~d~~G~--l~v~~--~-----------~~v~~~~~---~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~- 276 (296)
T 3e5z_A 218 -GKTDGLRVDAGGL--IWASA--G-----------DGVHVLTP---DGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS- 276 (296)
T ss_dssp -SCCCSEEEBTTSC--EEEEE--T-----------TEEEEECT---TSCEEEEEECSSC-CCEEEEESTTSCEEEEEET-
T ss_pred -CCCCeEEECCCCC--EEEEc--C-----------CeEEEECC---CCCEEEEEECCCC-ceeEEEECCCCCEEEEEcC-
Confidence 1234678999996 55442 1 24778887 5444444543444 778889 689988887652
Q ss_pred cccceEEEEEcCCCC
Q 005240 320 KTSQTRTWLVCPGSK 334 (706)
Q Consensus 320 ~~~~~~l~~~d~~~~ 334 (706)
..||++++.+.
T Consensus 277 ----~~l~~~~~~~~ 287 (296)
T 3e5z_A 277 ----TEFWSIETNVR 287 (296)
T ss_dssp ----TEEEEEECSCC
T ss_pred ----CeEEEEEcccc
Confidence 25999998874
No 310
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.95 E-value=6.5e-10 Score=122.06 Aligned_cols=142 Identities=18% Similarity=0.185 Sum_probs=90.0
Q ss_pred EEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCC-
Q 005240 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSI- 564 (706)
Q Consensus 487 ~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~- 564 (706)
+.+.|...+ -+|.|..... ...++|+||++|||++..|+..... +..........|++ .|++|+..+||
T Consensus 75 ~~sedcl~l--nv~~P~~~~~-~~~~~PV~v~iHGGg~~~Gs~~~~~------~~~~~~~~~~~la~~~~vvvV~~nYRL 145 (579)
T 2bce_A 75 YGNEDCLYL--NIWVPQGRKE-VSHDLPVMIWIYGGAFLMGASQGAN------FLSNYLYDGEEIATRGNVIVVTFNYRV 145 (579)
T ss_dssp ESCSCCCEE--EEEEEECSSS-CCCSEEEEEECCCCSEEEC-------------CTTGGGCCHHHHHHHTCEEEEECCCC
T ss_pred CCCCCCCEE--EEEECCCCCC-CCCCCeEEEEECCCcccCCCCCccc------cccccccChHHHhcCCCEEEEEeCCcc
Confidence 345676555 4778876421 1125899999999976533221100 00000011244554 57999998887
Q ss_pred CcCCCCCCCCchhhHHHHHHHHHHHHHHHHHc--CC-CCCCcEEEEEechHHHHHHHHHHh--CCCceeEEEeccCCC
Q 005240 565 PIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRR--GV-ADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSGSY 637 (706)
Q Consensus 565 ~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~--~~-id~~~i~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~~~ 637 (706)
+..|+........-++..+.|+..|++|++++ .+ .||+||.|+|+|+||+++.+++.. ...+|+++|+.+|..
T Consensus 146 g~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 146 GPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred ccccCCcCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 44344322111111233478999999999885 23 799999999999999999988875 346899999998853
No 311
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.95 E-value=3.2e-07 Score=99.07 Aligned_cols=285 Identities=8% Similarity=0.027 Sum_probs=154.8
Q ss_pred eeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCC
Q 005240 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKT 116 (706)
Q Consensus 37 ~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~ 116 (706)
.+++|+++|+.... ...|.++|+.+++......... ..+..+.|+|++ .|+..+.
T Consensus 127 ~~~~~~~~l~sgs~----------dg~i~vwd~~~~~~~~~~~~h~----~~V~~l~~~~~~-~l~s~s~---------- 181 (464)
T 3v7d_B 127 CLQFEDNYVITGAD----------DKMIRVYDSINKKFLLQLSGHD----GGVWALKYAHGG-ILVSGST---------- 181 (464)
T ss_dssp EEEEETTEEEEEET----------TSCEEEEETTTTEEEEEECCCS----SCEEEEEECSTT-EEEEEET----------
T ss_pred EEEECCCEEEEEcC----------CCcEEEEECCCCcEEEEEeCCC----cCEEEEEEcCCC-EEEEEeC----------
Confidence 46678888877542 3567778988887554432221 137789999999 5554432
Q ss_pred CCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-ceEeeeeeC--CCCcEEEE
Q 005240 117 MVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPS--PDQKYVLI 191 (706)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~S--pDG~~i~~ 191 (706)
.+.|.++++ +++ ...+... ..+..++|+ |+++.|+.
T Consensus 182 ---------------------------------------dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s 222 (464)
T 3v7d_B 182 ---------------------------------------DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVT 222 (464)
T ss_dssp ---------------------------------------TSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEE
T ss_pred ---------------------------------------CCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEE
Confidence 156777888 553 3344433 677778877 67777776
Q ss_pred EeeccCcccccccccccceEEEEecCCCeeEEcccCCCCC--------CCCcccCcc-CCCCcceeeecCCCceEEEEEe
Q 005240 192 TSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE--------DIPVCYNSV-REGMRSISWRADKPSTLYWVEA 262 (706)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~--------~~p~~~~~~-~~g~~~~~~spdg~~~l~~~~~ 262 (706)
.+.. ..|.+|++.+............. ..+...... .....-..++++++. |+...
T Consensus 223 ~s~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~- 287 (464)
T 3v7d_B 223 GSRD-------------NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNI-VVSGS- 287 (464)
T ss_dssp EETT-------------SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTE-EEEEE-
T ss_pred EcCC-------------CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCE-EEEEe-
Confidence 5543 37899998855422111100000 000000000 000112245677765 43221
Q ss_pred ccCCCCccccCccceeeeecCCCCCCCCc-eEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceee
Q 005240 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL 341 (706)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l 341 (706)
. ...|.++|+ .+++. ..+......+..+.|+||++.|+..+.+ ..|.++|+.++ +....
T Consensus 288 ~-----------d~~i~vwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d----g~i~vwd~~~~--~~~~~ 347 (464)
T 3v7d_B 288 Y-----------DNTLIVWDV---AQMKCLYILSGHTDRIYSTIYDHERKRCISASMD----TTIRIWDLENG--ELMYT 347 (464)
T ss_dssp T-----------TSCEEEEET---TTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT----SCEEEEETTTT--EEEEE
T ss_pred C-----------CCeEEEEEC---CCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC----CcEEEEECCCC--cEEEE
Confidence 1 224888888 44443 3344556778899999999988876522 24677777763 23322
Q ss_pred ecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhh
Q 005240 342 FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFET 421 (706)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~ 421 (706)
+......+ ..+.++ +++++....+ + .+..+|+.+++........
T Consensus 348 ~~~h~~~v------~~~~~~--~~~l~s~s~d----g-----------------~v~vwd~~~~~~~~~~~~~------- 391 (464)
T 3v7d_B 348 LQGHTALV------GLLRLS--DKFLVSAAAD----G-----------------SIRGWDANDYSRKFSYHHT------- 391 (464)
T ss_dssp ECCCSSCE------EEEEEC--SSEEEEEETT----S-----------------EEEEEETTTCCEEEEEECT-------
T ss_pred EeCCCCcE------EEEEEc--CCEEEEEeCC----C-----------------cEEEEECCCCceeeeecCC-------
Confidence 22211111 123343 5555554311 1 3556677665432222111
Q ss_pred hhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCceeE
Q 005240 422 AVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (706)
Q Consensus 422 ~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~ 466 (706)
.......|++|++.++.. ++ ..|.+||+.+++...
T Consensus 392 -----~~~~~~~~~~~~~~l~~~-~d----g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 392 -----NLSAITTFYVSDNILVSG-SE----NQFNIYNLRSGKLVH 426 (464)
T ss_dssp -----TCCCEEEEEECSSEEEEE-ET----TEEEEEETTTCCEEE
T ss_pred -----CCccEEEEEeCCCEEEEe-cC----CeEEEEECCCCcEEe
Confidence 112346899999866654 32 469999999887554
No 312
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=98.95 E-value=2e-08 Score=99.79 Aligned_cols=117 Identities=19% Similarity=0.165 Sum_probs=80.7
Q ss_pred EEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCc
Q 005240 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (706)
Q Consensus 487 ~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (706)
+...||..|.....-+.+ .|+||++||.+.. ...|. .....|+ .+|.|+..+-+
T Consensus 9 ~~~~~g~~l~y~~~G~~~--------~p~lvl~hG~~~~-----------~~~w~----~~~~~L~-~~~~vi~~D~r-- 62 (266)
T 3om8_A 9 LATSDGASLAYRLDGAAE--------KPLLALSNSIGTT-----------LHMWD----AQLPALT-RHFRVLRYDAR-- 62 (266)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGGG----GGHHHHH-TTCEEEEECCT--
T ss_pred EeccCCcEEEEEecCCCC--------CCEEEEeCCCccC-----------HHHHH----HHHHHhh-cCcEEEEEcCC--
Confidence 456689999877764421 3778889995321 11111 2334444 58999985554
Q ss_pred CCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
|+|.+... ....+...+|+.+.++.+ .-+++.++||||||.+++.++.++|++++++|..++.
T Consensus 63 -G~G~S~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~ 127 (266)
T 3om8_A 63 -GHGASSVPPGPYTLARLGEDVLELLDAL------EVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTS 127 (266)
T ss_dssp -TSTTSCCCCSCCCHHHHHHHHHHHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCc
Confidence 56655432 223556677777777655 2358999999999999999999999999999988653
No 313
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.94 E-value=1e-07 Score=96.32 Aligned_cols=221 Identities=15% Similarity=0.181 Sum_probs=127.4
Q ss_pred cceeEeecCCCCCCCCeeeeecCCC-CCcccceeeCCC--CCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCC
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~~~~SPD--G~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~ 81 (706)
..|.|.++.. +..+.+..+.. ...+..+.|+|+ |+.||..+. + ..|.++|+++++..++....
T Consensus 31 ~~v~iw~~~~----~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~--------D--~~v~iWd~~~~~~~~~~~~~ 96 (297)
T 2pm7_B 31 KTIKIFEVEG----ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY--------D--GKVMIWKEENGRWSQIAVHA 96 (297)
T ss_dssp SCEEEEEBCS----SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET--------T--TEEEEEEBSSSCBCCCEEEC
T ss_pred CEEEEEecCC----CCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC--------C--CEEEEEEcCCCceEEEEEee
Confidence 3578888864 32222222222 235888999974 888877642 3 46777788777533332111
Q ss_pred CccccccccceEEecC--CcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceE
Q 005240 82 DICLNAVFGSFVWVNN--STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (706)
Q Consensus 82 ~~~~~~~~~~~~wSpD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 159 (706)
.. ...+..+.|+|+ |.+|+..+.+ +.|
T Consensus 97 ~h--~~~v~~v~~~p~~~g~~l~s~s~d-------------------------------------------------~~v 125 (297)
T 2pm7_B 97 VH--SASVNSVQWAPHEYGPMLLVASSD-------------------------------------------------GKV 125 (297)
T ss_dssp CC--SSCEEEEEECCGGGCSEEEEEETT-------------------------------------------------SEE
T ss_pred cC--CCceeEEEeCcCCCCcEEEEEECC-------------------------------------------------CcE
Confidence 11 113778999998 7887766421 456
Q ss_pred EEEccC-C-C--ceecCCC-ceEeeeeeCCC-------------CcEEEEEeeccCcccccccccccceEEEEecCCCe-
Q 005240 160 VLGSLD-G-T--AKDFGTP-AVYTAVEPSPD-------------QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL- 220 (706)
Q Consensus 160 ~~~~l~-g-~--~~~lt~~-~~~~~~~~SpD-------------G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 220 (706)
.++++. + . ...+... ..+..++|+|+ ++.|+..+.+ ..|.+|++..++
T Consensus 126 ~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D-------------~~v~lwd~~~~~~ 192 (297)
T 2pm7_B 126 SVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-------------NLVKIWKYNSDAQ 192 (297)
T ss_dssp EEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETT-------------SCEEEEEEETTTT
T ss_pred EEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCC-------------CcEEEEEEcCCCc
Confidence 667773 3 2 2223233 56788999997 4566544433 378999987543
Q ss_pred ----eEEcccCCCCCCCCcccCccCCCCcceeeecCC--CceEEEEEeccCCCCccccCccceeeeecCCCCCCCC--c-
Q 005240 221 ----VRELCDLPPAEDIPVCYNSVREGMRSISWRADK--PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK--P- 291 (706)
Q Consensus 221 ----~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg--~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~--~- 291 (706)
...+..+. ..+..++|+|++ ...|+-. ..+ ..|.+||+ +.+. .
T Consensus 193 ~~~~~~~l~~H~-------------~~V~~v~~sp~~~~~~~las~-s~D-----------~~v~iWd~---~~~~~~~~ 244 (297)
T 2pm7_B 193 TYVLESTLEGHS-------------DWVRDVAWSPTVLLRSYMASV-SQD-----------RTCIIWTQ---DNEQGPWK 244 (297)
T ss_dssp EEEEEEEECCCS-------------SCEEEEEECCCCSSSEEEEEE-ETT-----------SCEEEEEE---SSTTSCCE
T ss_pred eEEEEEEecCCC-------------CceEEEEECCCCCCceEEEEE-ECC-----------CcEEEEEe---CCCCCccc
Confidence 12222111 225588999996 2313322 111 23677777 3321 1
Q ss_pred eEEe---ecccccccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 292 EILH---KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 292 ~~l~---~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
..+. .....+..++|+|||+.|+..+. ++..+||..+..+
T Consensus 245 ~~~~~~~~~~~~v~~~~~s~~g~~las~~~--D~~v~lw~~~~~g 287 (297)
T 2pm7_B 245 KTLLKEEKFPDVLWRASWSLSGNVLALSGG--DNKVTLWKENLEG 287 (297)
T ss_dssp EEESSSSCCSSCEEEEEECSSSCCEEEEET--TSCEEEEEECTTS
T ss_pred eeeeecccCCCcEEEEEECCCCCEEEEEcC--CCcEEEEEECCCC
Confidence 1222 23556778899999999987653 3567788776553
No 314
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.94 E-value=2.2e-07 Score=95.36 Aligned_cols=225 Identities=10% Similarity=0.012 Sum_probs=131.2
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDP 112 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~ 112 (706)
...|.|+||++.|+++.. ....|++++.++++.+.+.. +. .+..+.|+|||+.++.. .
T Consensus 51 ~egp~~~~~~~~l~~~d~---------~~~~i~~~d~~~~~~~~~~~-~~-----~v~~i~~~~dg~l~v~~-~------ 108 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNI---------LERELHELHLASGRKTVHAL-PF-----MGSALAKISDSKQLIAS-D------ 108 (326)
T ss_dssp EEEEEEETTTTEEEEEEG---------GGTEEEEEETTTTEEEEEEC-SS-----CEEEEEEEETTEEEEEE-T------
T ss_pred CcCCeEeCCCCEEEEEEC---------CCCEEEEEECCCCcEEEEEC-CC-----cceEEEEeCCCeEEEEE-C------
Confidence 457999999999988752 24689999999887766542 22 26788999999865543 1
Q ss_pred CCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCC------ceEeeeeeCCC
Q 005240 113 PKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP------AVYTAVEPSPD 185 (706)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~------~~~~~~~~SpD 185 (706)
..|+++++ +|+.+.+... ..+..++++||
T Consensus 109 --------------------------------------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 144 (326)
T 2ghs_A 109 --------------------------------------------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS 144 (326)
T ss_dssp --------------------------------------------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT
T ss_pred --------------------------------------------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCC
Confidence 35888888 5565554321 34678999999
Q ss_pred CcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccC
Q 005240 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (706)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~ 265 (706)
|+ |++....... ......|++++ + ++.+.+.... .....+.|+|||+. ||+....
T Consensus 145 G~-l~v~~~~~~~------~~~~~~l~~~~-~-g~~~~~~~~~-------------~~~~~i~~s~dg~~-lyv~~~~-- 199 (326)
T 2ghs_A 145 GA-LWIGTMGRKA------ETGAGSIYHVA-K-GKVTKLFADI-------------SIPNSICFSPDGTT-GYFVDTK-- 199 (326)
T ss_dssp SC-EEEEEEETTC------CTTCEEEEEEE-T-TEEEEEEEEE-------------SSEEEEEECTTSCE-EEEEETT--
T ss_pred CC-EEEEeCCCcC------CCCceEEEEEe-C-CcEEEeeCCC-------------cccCCeEEcCCCCE-EEEEECC--
Confidence 97 5555432110 00124788888 4 4555543211 01236799999987 7765311
Q ss_pred CCCccccCccceeeeecCCCCCCC-Cc---eEEeec---ccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCc
Q 005240 266 GDANVEVSPRDIIYTQPAEPAEGE-KP---EILHKL---DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAP 338 (706)
Q Consensus 266 ~~~~~~~~~~~~l~~~d~~~~~~~-~~---~~l~~~---~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~ 338 (706)
...|++++.++ +++ .. +.+... ......+.+.++|..++... ....|+++++++ +.
T Consensus 200 ---------~~~I~~~d~~~-~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~----~~~~v~~~d~~g---~~ 262 (326)
T 2ghs_A 200 ---------VNRLMRVPLDA-RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARW----GEGAVDRYDTDG---NH 262 (326)
T ss_dssp ---------TCEEEEEEBCT-TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEE----TTTEEEEECTTC---CE
T ss_pred ---------CCEEEEEEccc-ccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEe----CCCEEEEECCCC---CE
Confidence 12477887621 134 22 223221 23445677888886443321 223689999854 22
Q ss_pred eeeecCcccccccCCCCCceEec-cCCCEEEEee
Q 005240 339 RVLFDRVFENVYSDPGSPMMTRT-STGTNVIAKI 371 (706)
Q Consensus 339 ~~l~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~ 371 (706)
.......... ...++|+ +|++.|++..
T Consensus 263 ~~~i~~~~~~------~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 263 IARYEVPGKQ------TTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEEECSCSB------EEEEEEESTTSCEEEEEE
T ss_pred EEEEECCCCC------cEEEEEecCCCCEEEEEe
Confidence 2211111111 1235666 8888877765
No 315
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=98.94 E-value=6.1e-09 Score=104.96 Aligned_cols=113 Identities=14% Similarity=0.063 Sum_probs=78.1
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (706)
+|..+....+-+++ .|+||++||.+.. ...+. .....| +.||.|+..+.+ |+|
T Consensus 18 ~g~~l~~~~~g~~~--------~~~vl~lHG~~~~-----------~~~~~----~~~~~l-~~~~~v~~~d~~---G~G 70 (299)
T 3g9x_A 18 LGERMHYVDVGPRD--------GTPVLFLHGNPTS-----------SYLWR----NIIPHV-APSHRCIAPDLI---GMG 70 (299)
T ss_dssp TTEEEEEEEESCSS--------SCCEEEECCTTCC-----------GGGGT----TTHHHH-TTTSCEEEECCT---TST
T ss_pred CCeEEEEEecCCCC--------CCEEEEECCCCcc-----------HHHHH----HHHHHH-ccCCEEEeeCCC---CCC
Confidence 78888877764432 2578999997531 11121 234445 469999986665 445
Q ss_pred CCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 571 DKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 571 ~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
.+... ........+|+..+++++ +.+++.++|||+||++++.++.++|++++++|..++.
T Consensus 71 ~s~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 132 (299)
T 3g9x_A 71 KSDKPDLDYFFDDHVRYLDAFIEAL------GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFI 132 (299)
T ss_dssp TSCCCCCCCCHHHHHHHHHHHHHHT------TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEEC
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHh------CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCC
Confidence 44332 233555666776666654 4468999999999999999999999999999998844
No 316
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=98.93 E-value=1.9e-09 Score=117.62 Aligned_cols=135 Identities=21% Similarity=0.287 Sum_probs=89.7
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHH-HHHH-HCCeEEEEcCCCCc
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFL-ARRFAVLAGPSIPI 566 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~-~~G~~v~~~~~~~~ 566 (706)
+.|. +...+|+|....+.+ ++|+||++|||++..|+.. .+. ...++ ..++ ..|++|+.++||..
T Consensus 94 sedc--l~l~v~~P~~~~~~~--~~Pv~v~iHGGg~~~g~~~--------~~~--~~~l~~~~~~~~~~~vvv~~nYRl~ 159 (534)
T 1llf_A 94 SEDC--LTINVVRPPGTKAGA--NLPVMLWIFGGGFEIGSPT--------IFP--PAQMVTKSVLMGKPIIHVAVNYRVA 159 (534)
T ss_dssp CSCC--CEEEEEECTTCCTTC--CEEEEEEECCSTTTSCCGG--------GSC--CHHHHHHHHHTTCCCEEEEECCCCH
T ss_pred CCCC--eEEEEEECCCCCCCC--CceEEEEEeCCCcccCCCc--------ccC--chHHHHHHHhcCCCEEEEEeCCCCC
Confidence 4566 445588998643332 5899999999987543221 111 11112 2233 36899999888844
Q ss_pred C-CCCCCC--CchhhHHHHHHHHHHHHHHHHHc--CC-CCCCcEEEEEechHHHHHHHHHHhC--------CCceeEEEe
Q 005240 567 I-GEGDKL--PNDRFVEQLVSSAEAAVEEVVRR--GV-ADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIA 632 (706)
Q Consensus 567 ~-g~g~~~--~~~~~~~~~~~D~~~~~~~l~~~--~~-id~~~i~i~G~S~GG~~a~~~~~~~--------p~~~~a~v~ 632 (706)
. |+.... .....++..+.|+.+|++|++++ .+ .||+||.|+|+|+||++++.++... +.+|+++|+
T Consensus 160 ~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~ 239 (534)
T 1llf_A 160 SWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIM 239 (534)
T ss_dssp HHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEE
T ss_pred CCCCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhh
Confidence 2 332110 00112345689999999999885 23 7999999999999999998887763 468999999
Q ss_pred ccCCC
Q 005240 633 RSGSY 637 (706)
Q Consensus 633 ~~~~~ 637 (706)
.+|..
T Consensus 240 ~Sg~~ 244 (534)
T 1llf_A 240 QSGAM 244 (534)
T ss_dssp ESCCS
T ss_pred hccCc
Confidence 99853
No 317
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.93 E-value=2.5e-09 Score=118.05 Aligned_cols=115 Identities=18% Similarity=0.187 Sum_probs=80.8
Q ss_pred CceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCC-CcCCCCCC-------CCchhhHHHH
Q 005240 512 PLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSI-PIIGEGDK-------LPNDRFVEQL 582 (706)
Q Consensus 512 ~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~-~~~g~g~~-------~~~~~~~~~~ 582 (706)
++|+||++|||++..|+..... .....|++ .|++|+..+|| |..|+... ......++..
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~------------~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~g 207 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDI------------YNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVG 207 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGG------------GCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHH
T ss_pred CCCEEEEECCCcccCCCCCCCC------------CCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCccc
Confidence 5899999999987542221110 11245554 79999998887 44444321 0111123445
Q ss_pred HHHHHHHHHHHHHcC--C-CCCCcEEEEEechHHHHHHHHHHhC--CCceeEEEeccCCCC
Q 005240 583 VSSAEAAVEEVVRRG--V-ADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYN 638 (706)
Q Consensus 583 ~~D~~~~~~~l~~~~--~-id~~~i~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~d 638 (706)
+.|+..|++|+++.. + .||+||.|+|+|+||++++.++... ..+|+++|+.+|...
T Consensus 208 l~D~~~al~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~~ 268 (585)
T 1dx4_A 208 LWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 268 (585)
T ss_dssp HHHHHHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhccccC
Confidence 889999999999862 2 6999999999999999998888763 368999999998653
No 318
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.93 E-value=1.8e-07 Score=94.96 Aligned_cols=246 Identities=9% Similarity=-0.018 Sum_probs=137.3
Q ss_pred CCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCC
Q 005240 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (706)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg 98 (706)
.+.++|.. .......|.|+|||+.|+|+.. ....|++++. +++.+.+...... +..+.|++||
T Consensus 35 ~~~~~l~~--~~~~~egp~~~~~g~~l~~~d~---------~~~~i~~~~~-~g~~~~~~~~~~~-----~~gl~~d~dG 97 (305)
T 3dr2_A 35 ARLLTLYD--QATWSEGPAWWEAQRTLVWSDL---------VGRRVLGWRE-DGTVDVLLDATAF-----TNGNAVDAQQ 97 (305)
T ss_dssp CCCEEEEC--CCSSEEEEEEEGGGTEEEEEET---------TTTEEEEEET-TSCEEEEEESCSC-----EEEEEECTTS
T ss_pred CceEEEec--CCcCccCCeEeCCCCEEEEEEC---------CCCEEEEEeC-CCCEEEEeCCCCc-----cceeeECCCC
Confidence 45555542 2234668999999999988752 3467888988 4555555433322 5678999999
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCCceecCCC----
Q 005240 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGTP---- 174 (706)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~~~~lt~~---- 174 (706)
+.+++.. ....|++++.+|+.+.+...
T Consensus 98 ~l~v~~~-------------------------------------------------~~~~v~~~~~~g~~~~~~~~~~~~ 128 (305)
T 3dr2_A 98 RLVHCEH-------------------------------------------------GRRAITRSDADGQAHLLVGRYAGK 128 (305)
T ss_dssp CEEEEET-------------------------------------------------TTTEEEEECTTSCEEEEECEETTE
T ss_pred CEEEEEC-------------------------------------------------CCCEEEEECCCCCEEEEEeccCCC
Confidence 9555431 11467778877765554322
Q ss_pred --ceEeeeeeCCCCcEEEEEeeccCc--ccc---cccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcce
Q 005240 175 --AVYTAVEPSPDQKYVLITSMHRPY--SYK---VPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSI 247 (706)
Q Consensus 175 --~~~~~~~~SpDG~~i~~~~~~~~~--~~~---~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~ 247 (706)
..+..++++|||+ |+|+...-.. .+. .........|++++.++++.+.+. .. ..+..+
T Consensus 129 ~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~-------------~~p~gl 193 (305)
T 3dr2_A 129 RLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DL-------------DHPNGL 193 (305)
T ss_dssp ECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EE-------------SSEEEE
T ss_pred ccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cC-------------CCCcce
Confidence 2345789999996 5564311000 000 000011257899998777666654 11 112367
Q ss_pred eeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce---EEee-cccccccceecCCCceEEEEeeccccc
Q 005240 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE---ILHK-LDLRFRSVSWCDDSLALVNETWYKTSQ 323 (706)
Q Consensus 248 ~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~---~l~~-~~~~~~~~~wspDg~~l~~~~~~~~~~ 323 (706)
+|+|||+. ||+.. ..... .....|+++++ +++... .+.. .......+.+.++|. |++.. .
T Consensus 194 ~~spdg~~-lyv~~-~~~~~-----~~~~~i~~~~~---~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~-~---- 257 (305)
T 3dr2_A 194 AFSPDEQT-LYVSQ-TPEQG-----HGSVEITAFAW---RDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSS-G---- 257 (305)
T ss_dssp EECTTSSE-EEEEE-CCC--------CCCEEEEEEE---ETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECC-S----
T ss_pred EEcCCCCE-EEEEe-cCCcC-----CCCCEEEEEEe---cCCCccCCeEEEECCCCCCCeEEECCCCC-EEEec-C----
Confidence 99999987 76653 21100 01135778777 332221 1111 133445678888888 44332 1
Q ss_pred eEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 324 TRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 324 ~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
..|++++.++. ....+ .... +...+.|++|++.|+++.
T Consensus 258 ~gv~~~~~~g~--~~~~~-~~~~-------~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 258 TGVCVFDSDGQ--LLGHI-PTPG-------TASNCTFDQAQQRLFITG 295 (305)
T ss_dssp SEEEEECTTSC--EEEEE-ECSS-------CCCEEEECTTSCEEEEEE
T ss_pred CcEEEECCCCC--EEEEE-ECCC-------ceeEEEEeCCCCEEEEEc
Confidence 24999998652 22222 1110 122366788988888775
No 319
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.92 E-value=6.5e-08 Score=111.37 Aligned_cols=229 Identities=14% Similarity=0.098 Sum_probs=133.4
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecC--CcEEEEEecCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN--STLLIFTIPSSR 109 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpD--g~~l~~~~~~~~ 109 (706)
.+..+.|||||++|+.... + ..|.++++.++....+.....+ ...+..+.|+|+ |+.|+..+.+
T Consensus 11 ~V~~l~~s~dg~~latg~~--------d--g~I~vwd~~~~~~~~~~~l~~h--~~~V~~l~~s~~~~~~~l~s~s~D-- 76 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSS--------D--KTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSYD-- 76 (753)
T ss_dssp CEEEECCCSSSCCEEEEET--------T--TEEEEEEEETTEEEEEEEECCC--SSCEEEEEECCTTSCSEEEEEETT--
T ss_pred eeEEEEECCCCCeEEEEEC--------C--CcEEEEecCCCCCccceeccCC--cCceEEEEecCCCCCCEEEEEeCC--
Confidence 4888999999999987643 3 3555556554333222211111 113778999988 8888876421
Q ss_pred CCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC---ceecCCC-ceEeeeeeCC
Q 005240 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT---AKDFGTP-AVYTAVEPSP 184 (706)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~---~~~lt~~-~~~~~~~~Sp 184 (706)
+.|.++++ +++ ...+... ..+..++|+|
T Consensus 77 -----------------------------------------------g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp 109 (753)
T 3jro_A 77 -----------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 109 (753)
T ss_dssp -----------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred -----------------------------------------------CeEEEEECCCCcccccccccCCCCCeEEEEECC
Confidence 56777787 443 2233333 6789999999
Q ss_pred C--CcEEEEEeeccCcccccccccccceEEEEecCCCee---EEcccCCCCCCCCcccCccCCCCcceeeec--------
Q 005240 185 D--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV---RELCDLPPAEDIPVCYNSVREGMRSISWRA-------- 251 (706)
Q Consensus 185 D--G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~l~~~~~~~~~p~~~~~~~~g~~~~~~sp-------- 251 (706)
+ |+.|+..+.. ..|.+|++..+.. ..+.... ..+..+.|+|
T Consensus 110 ~~~~~~l~sgs~d-------------g~I~vwdl~~~~~~~~~~~~~~~-------------~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 110 HEYGPLLLVASSD-------------GKVSVVEFKENGTTSPIIIDAHA-------------IGVNSASWAPATIEEDGE 163 (753)
T ss_dssp GGGCSEEEEEETT-------------SEEEEEECCSSSCCCCEEEECCS-------------SCEEEEEECCCC------
T ss_pred CCCCCEEEEEeCC-------------CcEEEEEeecCCCcceeEeecCC-------------CceEEEEecCcccccccc
Confidence 9 8888766543 3799999985521 1221111 2244778888
Q ss_pred -----CCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-----eEEeecccccccceecCC---CceEEEEee
Q 005240 252 -----DKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-----EILHKLDLRFRSVSWCDD---SLALVNETW 318 (706)
Q Consensus 252 -----dg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-----~~l~~~~~~~~~~~wspD---g~~l~~~~~ 318 (706)
|++. |+... . .+.|.+||+ .++.. ..+..+...+..+.|+|+ ++.|+..+.
T Consensus 164 ~~~~~d~~~-l~sgs-~-----------dg~I~iwd~---~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 164 HNGTKESRK-FVTGG-A-----------DNLVKIWKY---NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp ---CGGGCC-EEEEE-T-----------TSCEEEEEE---ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred cccCCCCCE-EEEEE-C-----------CCeEEEEec---cCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 4665 44331 1 124778877 33322 123345677889999999 787777652
Q ss_pred ccccceEEEEEcCCCCCCCce-eeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 319 YKTSQTRTWLVCPGSKDVAPR-VLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 319 ~~~~~~~l~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
++...|| |+.+++.... .+.... ........+.|+|+|++++...
T Consensus 228 --Dg~I~iw--d~~~~~~~~~~~~~~~~----~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 228 --DRTCIIW--TQDNEQGPWKKTLLKEE----KFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp --SSCEEEE--EESSSSSCCBCCBSSSS----CCSSCCCCEEECTTTCCEEEEC
T ss_pred --CCEEEEe--cCCCCCCcceeEEeccC----CCCCceEEEEEcCCCCEEEEEc
Confidence 2344454 4444321111 111110 0011233578999999887764
No 320
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.91 E-value=3e-07 Score=94.45 Aligned_cols=233 Identities=12% Similarity=0.037 Sum_probs=136.8
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
.|++.+++. ++.+++.. .....+..+.|+|||+.++..... ......|++++.++++.+.+......
T Consensus 67 ~i~~~d~~~----~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~------~~~~~~i~~~d~~~~~~~~~~~~~~~-- 133 (333)
T 2dg1_A 67 NIFKINPET----KEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGD------FKSTGGIFAATENGDNLQDIIEDLST-- 133 (333)
T ss_dssp EEEEECTTT----CCEEEEEE-CSSSSEEEEEECTTSCEEEEECTT------SSSCCEEEEECTTSCSCEEEECSSSS--
T ss_pred EEEEEeCCC----CcEEEEee-CCCCCcceEEECCCCcEEEEeCCC------CCCCceEEEEeCCCCEEEEEEccCcc--
Confidence 466666654 77766642 223357789999999855443210 01235899999998877644221111
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC
Q 005240 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (706)
Q Consensus 86 ~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~ 165 (706)
...+..+.++|||+.+ +........ .....||+++.+
T Consensus 134 ~~~~~~i~~d~~g~l~-v~~~~~~~~------------------------------------------~~~~~l~~~~~~ 170 (333)
T 2dg1_A 134 AYCIDDMVFDSKGGFY-FTDFRGYST------------------------------------------NPLGGVYYVSPD 170 (333)
T ss_dssp CCCEEEEEECTTSCEE-EEECCCBTT------------------------------------------BCCEEEEEECTT
T ss_pred CCcccceEECCCCCEE-EEecccccc------------------------------------------CCCceEEEEeCC
Confidence 1125678999999754 432210000 012689999986
Q ss_pred C-CceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC--CCeeEEcc-----cCCCCCCCCcc
Q 005240 166 G-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GKLVRELC-----DLPPAEDIPVC 236 (706)
Q Consensus 166 g-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~-----~~~~~~~~p~~ 236 (706)
+ +.+.+... .....++|+|||+.|++..... ..|++|+++ +.....+. .....
T Consensus 171 ~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~------------~~i~~~d~~~~g~~~~~~~~~~~~~~~~~------ 232 (333)
T 2dg1_A 171 FRTVTPIIQNISVANGIALSTDEKVLWVTETTA------------NRLHRIALEDDGVTIQPFGATIPYYFTGH------ 232 (333)
T ss_dssp SCCEEEEEEEESSEEEEEECTTSSEEEEEEGGG------------TEEEEEEECTTSSSEEEEEEEEEEECCSS------
T ss_pred CCEEEEeecCCCcccceEECCCCCEEEEEeCCC------------CeEEEEEecCCCcCcccccceEEEecCCC------
Confidence 5 66665443 4567899999999998775432 478999985 33332211 11100
Q ss_pred cCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeeccc------ccccceecCCC
Q 005240 237 YNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL------RFRSVSWCDDS 310 (706)
Q Consensus 237 ~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~------~~~~~~wspDg 310 (706)
..+..+.++++|+ |++.. .. ...|+++|. ++...+.+..... ....+.|+||+
T Consensus 233 -----~~~~~i~~d~~G~--l~v~~-~~----------~~~v~~~d~---~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg 291 (333)
T 2dg1_A 233 -----EGPDSCCIDSDDN--LYVAM-YG----------QGRVLVFNK---RGYPIGQILIPGRDEGHMLRSTHPQFIPGT 291 (333)
T ss_dssp -----SEEEEEEEBTTCC--EEEEE-ET----------TTEEEEECT---TSCEEEEEECTTGGGTCSCBCCEEEECTTS
T ss_pred -----CCCCceEECCCCC--EEEEE-cC----------CCEEEEECC---CCCEEEEEEcCCCccccccCcceEEECCCC
Confidence 1133678899986 54332 11 124778876 4443344432222 46788999999
Q ss_pred ceEEEEeecc--ccceEEEEEcCCC
Q 005240 311 LALVNETWYK--TSQTRTWLVCPGS 333 (706)
Q Consensus 311 ~~l~~~~~~~--~~~~~l~~~d~~~ 333 (706)
+.|++..... .....||.+++..
T Consensus 292 ~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 292 NQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp CEEEEEEECGGGTCCEEEEEEECSS
T ss_pred CEEEEEeCccCCCCCceEEEEeccc
Confidence 8887765432 2345799998765
No 321
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.91 E-value=5.1e-07 Score=93.79 Aligned_cols=209 Identities=9% Similarity=-0.022 Sum_probs=123.3
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
++.|+++++ ++........ .+....++++++.++.+.. +...|.++|..+++.........
T Consensus 41 ~~~iw~~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---------~d~~v~iWd~~~~~~~~~~~~~~--- 101 (355)
T 3vu4_A 41 SFEIYNVHP----VAHIMSQEMR---HLSKVRMLHRTNYVAFVTG---------VKEVVHIWDDVKKQDVSRIKVDA--- 101 (355)
T ss_dssp EEEEEEETT----EEEEEEEECS---CCCEEEECTTSSEEEEECS---------STTEEEEEETTTTEEEEEEECSS---
T ss_pred EEEEEecCC----cceeeeeecC---CeEEEEEcCCCCEEEEEEC---------CccEEEEEECCCCcEEEEEECCC---
Confidence 456777755 4443333211 3667889999999988652 23588889998887654333332
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC
Q 005240 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (706)
Q Consensus 86 ~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~ 165 (706)
.+..+.|++++. +.... ..++++++.
T Consensus 102 --~v~~v~~~~~~~--~~~~~--------------------------------------------------~~i~i~d~~ 127 (355)
T 3vu4_A 102 --PVKDLFLSREFI--VVSYG--------------------------------------------------DVISVFKFG 127 (355)
T ss_dssp --CEEEEEECSSEE--EEEET--------------------------------------------------TEEEEEESS
T ss_pred --ceEEEEEcCCEE--EEEEc--------------------------------------------------CEEEEEECC
Confidence 266778887753 33221 467777884
Q ss_pred CCceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCe-----------------eEEcccC
Q 005240 166 GTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-----------------VRELCDL 227 (706)
Q Consensus 166 g~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------~~~l~~~ 227 (706)
...+.+... ......+++| +.+++.+... ...|.+||+.++. .+.+..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~-----------~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h 194 (355)
T 3vu4_A 128 NPWKRITDDIRFGGVCEFSN--GLLVYSNEFN-----------LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH 194 (355)
T ss_dssp TTCCBSSCCEEEEEEEEEET--TEEEEEESSC-----------TTCEEEEECCC------------------CCEEECCC
T ss_pred CCceeeEEeccCCceEEEEc--cEEEEeCCCc-----------CcEEEEEECCCCCccccccccccccccCcccEEEEcc
Confidence 322222211 2334556777 7787763222 2479999998654 2222222
Q ss_pred CCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccce-eeeecCCCCCCCCc-eEEe-e-ccccccc
Q 005240 228 PPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI-IYTQPAEPAEGEKP-EILH-K-LDLRFRS 303 (706)
Q Consensus 228 ~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~-l~~~d~~~~~~~~~-~~l~-~-~~~~~~~ 303 (706)
. ..+..++|+|||+. |+-.. . ... |.+||+ .+++. ..+. . +...+..
T Consensus 195 ~-------------~~v~~~~~s~~g~~-l~s~s-~-----------d~~~v~iwd~---~~~~~~~~~~~g~h~~~v~~ 245 (355)
T 3vu4_A 195 T-------------NPIKMVRLNRKSDM-VATCS-Q-----------DGTIIRVFKT---EDGVLVREFRRGLDRADVVD 245 (355)
T ss_dssp S-------------SCEEEEEECTTSSE-EEEEE-T-----------TCSEEEEEET---TTCCEEEEEECTTCCSCEEE
T ss_pred C-------------CceEEEEECCCCCE-EEEEe-C-----------CCCEEEEEEC---CCCcEEEEEEcCCCCCcEEE
Confidence 1 22457899999986 54221 1 123 778888 55544 3444 2 5678899
Q ss_pred ceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 304 VSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 304 ~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
+.|+|||+.|+..+.+ +. |.++|+..
T Consensus 246 ~~~s~~~~~l~s~s~d--~~--v~iw~~~~ 271 (355)
T 3vu4_A 246 MKWSTDGSKLAVVSDK--WT--LHVFEIFN 271 (355)
T ss_dssp EEECTTSCEEEEEETT--CE--EEEEESSC
T ss_pred EEECCCCCEEEEEECC--CE--EEEEEccC
Confidence 9999999998876532 33 44445544
No 322
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.91 E-value=1e-06 Score=95.04 Aligned_cols=293 Identities=10% Similarity=0.047 Sum_probs=159.3
Q ss_pred cceeEeecCCCCCCCCeee-eecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 5 TGIGIHRLLPDDSLGPEKE-VHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~-i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
..|.++++.. ++... +.. ....+...+|+||+ .|+... ....|.++|+++++.........
T Consensus 142 g~i~vwd~~~----~~~~~~~~~--h~~~V~~l~~~~~~-~l~s~s----------~dg~i~vwd~~~~~~~~~~~~h~- 203 (464)
T 3v7d_B 142 KMIRVYDSIN----KKFLLQLSG--HDGGVWALKYAHGG-ILVSGS----------TDRTVRVWDIKKGCCTHVFEGHN- 203 (464)
T ss_dssp SCEEEEETTT----TEEEEEECC--CSSCEEEEEECSTT-EEEEEE----------TTSCEEEEETTTTEEEEEECCCS-
T ss_pred CcEEEEECCC----CcEEEEEeC--CCcCEEEEEEcCCC-EEEEEe----------CCCCEEEEECCCCcEEEEECCCC-
Confidence 3588888866 54333 222 22358899999999 554433 23567788988887655443221
Q ss_pred cccccccceEEe--cCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 84 CLNAVFGSFVWV--NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 84 ~~~~~~~~~~wS--pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
..+..+.|+ ++++.|+..+.+ +.|.+
T Consensus 204 ---~~v~~l~~~~~~~~~~l~s~s~d-------------------------------------------------~~i~v 231 (464)
T 3v7d_B 204 ---STVRCLDIVEYKNIKYIVTGSRD-------------------------------------------------NTLHV 231 (464)
T ss_dssp ---SCEEEEEEEESSSCEEEEEEETT-------------------------------------------------SCEEE
T ss_pred ---CccEEEEEecCCCCCEEEEEcCC-------------------------------------------------CcEEE
Confidence 126677887 577877766432 12223
Q ss_pred EccC-CC------------------------ceecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEec
Q 005240 162 GSLD-GT------------------------AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTT 216 (706)
Q Consensus 162 ~~l~-g~------------------------~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~ 216 (706)
+++. +. ...+... ......++|+++.|+..+.+ ..|.+||+
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~d-------------~~i~vwd~ 297 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH-MASVRTVSGHGNIVVSGSYD-------------NTLIVWDV 297 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCC-SSCEEEEEEETTEEEEEETT-------------SCEEEEET
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc-cceEEEEcCCCCEEEEEeCC-------------CeEEEEEC
Confidence 3331 11 1111111 11123457899988766544 37999999
Q ss_pred CCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEe
Q 005240 217 DGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILH 295 (706)
Q Consensus 217 ~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~ 295 (706)
.+++......... ..+..+.|+|+++. |+... . .+.|.+||+ .+++. ..+.
T Consensus 298 ~~~~~~~~~~~~~------------~~v~~~~~~~~~~~-l~sg~-~-----------dg~i~vwd~---~~~~~~~~~~ 349 (464)
T 3v7d_B 298 AQMKCLYILSGHT------------DRIYSTIYDHERKR-CISAS-M-----------DTTIRIWDL---ENGELMYTLQ 349 (464)
T ss_dssp TTTEEEEEECCCS------------SCEEEEEEETTTTE-EEEEE-T-----------TSCEEEEET---TTTEEEEEEC
T ss_pred CCCcEEEEecCCC------------CCEEEEEEcCCCCE-EEEEe-C-----------CCcEEEEEC---CCCcEEEEEe
Confidence 8665433222110 22457899999986 54321 1 124788888 44443 3344
Q ss_pred ecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccC
Q 005240 296 KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 375 (706)
Q Consensus 296 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 375 (706)
.+...+..+.|+ +..|+..+. ...|.++|+.+.. ........ .......++++|+.++...+
T Consensus 350 ~h~~~v~~~~~~--~~~l~s~s~----dg~v~vwd~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~l~~~~d--- 411 (464)
T 3v7d_B 350 GHTALVGLLRLS--DKFLVSAAA----DGSIRGWDANDYS--RKFSYHHT-------NLSAITTFYVSDNILVSGSE--- 411 (464)
T ss_dssp CCSSCEEEEEEC--SSEEEEEET----TSEEEEEETTTCC--EEEEEECT-------TCCCEEEEEECSSEEEEEET---
T ss_pred CCCCcEEEEEEc--CCEEEEEeC----CCcEEEEECCCCc--eeeeecCC-------CCccEEEEEeCCCEEEEecC---
Confidence 556677788887 456666542 2246677777642 22211111 11223567899998776541
Q ss_pred CcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEE
Q 005240 376 DEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYH 455 (706)
Q Consensus 376 ~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~ 455 (706)
..+..+|+.+|+..+....... .....+.| +++.++.+..+. ....++
T Consensus 412 -------------------g~i~iwd~~~g~~~~~~~~~~~----------~~v~~v~~--~~~~l~~~~~~~-g~~~i~ 459 (464)
T 3v7d_B 412 -------------------NQFNIYNLRSGKLVHANILKDA----------DQIWSVNF--KGKTLVAAVEKD-GQSFLE 459 (464)
T ss_dssp -------------------TEEEEEETTTCCEEESCTTTTC----------SEEEEEEE--ETTEEEEEEEET-TEEEEE
T ss_pred -------------------CeEEEEECCCCcEEehhhccCC----------CcEEEEEe--cCCEEEEEEEeC-CeEEEE
Confidence 1366778888765432111110 11123445 466777665544 344455
Q ss_pred EEEC
Q 005240 456 ILSW 459 (706)
Q Consensus 456 ~~~~ 459 (706)
.+|+
T Consensus 460 ~ldf 463 (464)
T 3v7d_B 460 ILDF 463 (464)
T ss_dssp EEEC
T ss_pred Eeec
Confidence 5553
No 323
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.91 E-value=1.5e-07 Score=100.72 Aligned_cols=219 Identities=11% Similarity=0.214 Sum_probs=125.8
Q ss_pred ceeEeecCCC-------CCCCCeeeeecCCCCCcccceeeCCCCC-eEEEEeeccccccccCCceeEEEEEcCCCce---
Q 005240 6 GIGIHRLLPD-------DSLGPEKEVHGYPDGAKINFVSWSPDGK-RIAFSVRVDEEDNVSSCKLRVWIADAETGEA--- 74 (706)
Q Consensus 6 ~~~~~~~~~~-------~~~g~~~~i~~~~~~~~~~~~~~SPDG~-~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~--- 74 (706)
.|.|.++... +.......+.. ....+..+.|+|+++ .|+... ....|.++++..+..
T Consensus 152 ~V~vwd~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~ 219 (430)
T 2xyi_A 152 DVLVFDYTKHPSKPEPSGECQPDLRLRG--HQKEGYGLSWNPNLNGYLLSAS----------DDHTICLWDINATPKEHR 219 (430)
T ss_dssp CEEEEEGGGSCSSCCTTCCCCCSEEEEC--CSSCCCCEEECTTSTTEEEEEC----------TTSCEEEEETTSCCBGGG
T ss_pred cEEEEECCCcccccCccccCCCcEEecC--CCCCeEEEEeCCCCCCeEEEEe----------CCCeEEEEeCCCCCCCCc
Confidence 5778888641 11233333332 223578999999999 555432 235677778766321
Q ss_pred -----eecccCCCccccccccceEEec-CCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhh
Q 005240 75 -----KPLFESPDICLNAVFGSFVWVN-NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDE 148 (706)
Q Consensus 75 -----~~lt~~~~~~~~~~~~~~~wSp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 148 (706)
..+..+.. .+..+.|+| ++..|+....
T Consensus 220 ~~~~~~~~~~h~~-----~v~~v~~~p~~~~~l~s~~~------------------------------------------ 252 (430)
T 2xyi_A 220 VIDAKNIFTGHTA-----VVEDVAWHLLHESLFGSVAD------------------------------------------ 252 (430)
T ss_dssp EEECSEEECCCSS-----CEEEEEECSSCTTEEEEEET------------------------------------------
T ss_pred eeccceeecCCCC-----CEeeeEEeCCCCCEEEEEeC------------------------------------------
Confidence 12221222 277899999 4555554431
Q ss_pred hhhhhcccceEEEEcc-CC---C-ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC-C-e
Q 005240 149 SLFDYYTTAQLVLGSL-DG---T-AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG-K-L 220 (706)
Q Consensus 149 ~~~~~~~~~~l~~~~l-~g---~-~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~ 220 (706)
.+.|.++++ ++ + ...+... ..+..++|+|++++++++.... ..|.+|++.. + .
T Consensus 253 -------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d------------g~v~vwd~~~~~~~ 313 (430)
T 2xyi_A 253 -------DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD------------KTVALWDLRNLKLK 313 (430)
T ss_dssp -------TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT------------SEEEEEETTCTTSC
T ss_pred -------CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC------------CeEEEEeCCCCCCC
Confidence 157888888 33 1 2233233 6788999999999776665442 4799999985 2 2
Q ss_pred eEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC----------
Q 005240 221 VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---------- 290 (706)
Q Consensus 221 ~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---------- 290 (706)
+..+..+. ..+..+.|+|+++. ++.....+ +.|.+||+. ..+.
T Consensus 314 ~~~~~~h~-------------~~v~~i~~sp~~~~-~l~s~~~d-----------~~i~iwd~~--~~~~~~~~~~~~~~ 366 (430)
T 2xyi_A 314 LHSFESHK-------------DEIFQVQWSPHNET-ILASSGTD-----------RRLHVWDLS--KIGEEQSTEDAEDG 366 (430)
T ss_dssp SEEEECCS-------------SCEEEEEECSSCTT-EEEEEETT-----------SCCEEEEGG--GTTCCCCHHHHHHC
T ss_pred eEEeecCC-------------CCEEEEEECCCCCC-EEEEEeCC-----------CcEEEEeCC--CCccccCccccccC
Confidence 33333221 22457899999987 44343222 136677762 1111
Q ss_pred -ceEEe---ecccccccceecCCCceEEEEeeccccceEEEEEc
Q 005240 291 -PEILH---KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVC 330 (706)
Q Consensus 291 -~~~l~---~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d 330 (706)
++.+. .+...+..+.|+|++..++++... ++..+||.++
T Consensus 367 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~-dg~i~iw~~~ 409 (430)
T 2xyi_A 367 PPELLFIHGGHTAKISDFSWNPNEPWIICSVSE-DNIMQVWQMA 409 (430)
T ss_dssp CTTEEEECCCCSSCEEEEEECSSSTTEEEEEET-TSEEEEEEEC
T ss_pred CcceEEEcCCCCCCceEEEECCCCCCEEEEEEC-CCCEEEeEcc
Confidence 13332 335568899999999954444322 3455566654
No 324
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.91 E-value=7.4e-07 Score=93.88 Aligned_cols=237 Identities=14% Similarity=0.101 Sum_probs=132.3
Q ss_pred CcccceeeCC-CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCC---cEEEEEec
Q 005240 31 AKINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS---TLLIFTIP 106 (706)
Q Consensus 31 ~~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg---~~l~~~~~ 106 (706)
..+..+.|+| +++.|+... ....|.++++.+++.......... +..+.|+|.+ ..|+....
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 164 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSS----------FDKTLKVWDTNTLQTADVFNFEET-----VYSHHMSPVSTKHCLVAVGTR 164 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEE----------TTSEEEEEETTTTEEEEEEECSSC-----EEEEEECSSCSSCCEEEEEES
T ss_pred CcEEEEEEccCCCcEEEEEe----------CCCeEEEeeCCCCccceeccCCCc-----eeeeEeecCCCCCcEEEEEcC
Confidence 3688899999 666666543 235788889988877665543332 5677888744 46666532
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC-CceecCCC-ceEeeeeeC
Q 005240 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTP-AVYTAVEPS 183 (706)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g-~~~~lt~~-~~~~~~~~S 183 (706)
.+.|.++++ ++ ....+... ..+..++|+
T Consensus 165 -------------------------------------------------~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 165 -------------------------------------------------GPKVQLCDLKSGSCSHILQGHRQEILAVSWS 195 (408)
T ss_dssp -------------------------------------------------SSSEEEEESSSSCCCEEECCCCSCEEEEEEC
T ss_pred -------------------------------------------------CCeEEEEeCCCcceeeeecCCCCcEEEEEEC
Confidence 156888888 45 44455544 678899999
Q ss_pred CCCcEEEEEeeccCcccccccccccceEEEEecCCCe--eEEcccCCCCCCCC--cccCccCCCCcceeeecCCCceEEE
Q 005240 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL--VRELCDLPPAEDIP--VCYNSVREGMRSISWRADKPSTLYW 259 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~~~~~p--~~~~~~~~g~~~~~~spdg~~~l~~ 259 (706)
|++++++++.... ..|.+|++.... ...+.......... .........+..+.|+||++. |+.
T Consensus 196 ~~~~~ll~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~ 262 (408)
T 4a11_B 196 PRYDYILATASAD------------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH-LLT 262 (408)
T ss_dssp SSCTTEEEEEETT------------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE-EEE
T ss_pred CCCCcEEEEEcCC------------CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE-EEE
Confidence 9999865555442 379999997442 23332211111000 000111122457899999986 553
Q ss_pred EEeccCCCCccccCccceeeeecCCCCCCCCceEEe-ec----ccccccceecC-CCceEEEEeeccccceEEEEEcCCC
Q 005240 260 VEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH-KL----DLRFRSVSWCD-DSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-~~----~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
.. .+ +.|.+||+ .+++..... .. ........+.. .+..+++... ...|.++|+.+
T Consensus 263 ~~-~d-----------g~i~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~v~d~~~ 323 (408)
T 4a11_B 263 VG-TD-----------NRMRLWNS---SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY----GSTIAVYTVYS 323 (408)
T ss_dssp EE-TT-----------SCEEEEET---TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE----TTEEEEEETTT
T ss_pred ec-CC-----------CeEEEEEC---CCCccceeccccccccccccceeEEecCCCceEEEEec----CCEEEEEECcC
Confidence 32 11 24778887 444332211 11 11111222222 2444555432 23588888877
Q ss_pred CCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 334 KDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 334 ~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
+ +....+...... ...+.|+|||++|+...
T Consensus 324 ~--~~~~~~~~~~~~------v~~~~~s~~~~~l~s~~ 353 (408)
T 4a11_B 324 G--EQITMLKGHYKT------VDCCVFQSNFQELYSGS 353 (408)
T ss_dssp C--CEEEEECCCSSC------EEEEEEETTTTEEEEEE
T ss_pred C--cceeeeccCCCe------EEEEEEcCCCCEEEEEC
Confidence 4 333333222111 22377899999887654
No 325
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=98.91 E-value=1.1e-08 Score=100.55 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=58.1
Q ss_pred HHHHHHHCCeEEEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCC
Q 005240 547 SSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 624 (706)
Q Consensus 547 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p 624 (706)
....|++.||.|+.++.+ |+|.+... ........+|+.++++++.+.+. +++.++||||||.+++.++.++|
T Consensus 35 ~~~~L~~~g~~vi~~D~~---GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~~~lvG~SmGG~ia~~~a~~~p 108 (247)
T 1tqh_A 35 LGRFLESKGYTCHAPIYK---GHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGY---EKIAVAGLSLGGVFSLKLGYTVP 108 (247)
T ss_dssp HHHHHHHTTCEEEECCCT---TSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTC---CCEEEEEETHHHHHHHHHHTTSC
T ss_pred HHHHHHHCCCEEEecccC---CCCCCHHHhcCCCHHHHHHHHHHHHHHHHHcCC---CeEEEEEeCHHHHHHHHHHHhCC
Confidence 456677899999996665 55643211 11244556778888888876542 58999999999999999999998
Q ss_pred CceeEEEecc
Q 005240 625 HLFCCGIARS 634 (706)
Q Consensus 625 ~~~~a~v~~~ 634 (706)
++++|+.+
T Consensus 109 --v~~lvl~~ 116 (247)
T 1tqh_A 109 --IEGIVTMC 116 (247)
T ss_dssp --CSCEEEES
T ss_pred --CCeEEEEc
Confidence 77777543
No 326
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=98.90 E-value=2.8e-09 Score=101.14 Aligned_cols=143 Identities=13% Similarity=0.055 Sum_probs=83.6
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHC--CeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR--RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 590 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~ 590 (706)
.|+|||+||=. +++.++. ...+.+.+.++ +|.|++++.. |+| +...++ +
T Consensus 2 mptIl~lHGf~-----------ss~~s~k--~~~l~~~~~~~~~~~~v~~pdl~---~~g---------~~~~~~----l 52 (202)
T 4fle_A 2 MSTLLYIHGFN-----------SSPSSAK--ATTFKSWLQQHHPHIEMQIPQLP---PYP---------AEAAEM----L 52 (202)
T ss_dssp -CEEEEECCTT-----------CCTTCHH--HHHHHHHHHHHCTTSEEECCCCC---SSH---------HHHHHH----H
T ss_pred CcEEEEeCCCC-----------CCCCccH--HHHHHHHHHHcCCCcEEEEeCCC---CCH---------HHHHHH----H
Confidence 38999999921 1111110 11223445554 5899986653 332 222222 3
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCCC----------C------------------
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKTL----------T------------------ 642 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~~----------~------------------ 642 (706)
+.+.++ .++++|+|+|+||||++|++++.++|....+++...+..+... .
T Consensus 53 ~~~~~~--~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (202)
T 4fle_A 53 ESIVMD--KAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRHIYDLKAMQ 130 (202)
T ss_dssp HHHHHH--HTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHHHHHHHTTC
T ss_pred HHHHHh--cCCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhccccccccccchHHHHHHHHhhh
Confidence 333332 2457999999999999999999999888777766654321100 0
Q ss_pred --------Ccc---------chHHHHHHHHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHH
Q 005240 643 --------PFG---------FQAERFFDALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQK 693 (706)
Q Consensus 643 --------~~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~ 693 (706)
|.. ... +...++- .+++++++||++|.+... .+.++.|.+||+-
T Consensus 131 ~~~~~~~~P~LiihG~~D~~Vp~-~~s~~l~---~~~~l~i~~g~~H~~~~~---~~~~~~I~~FL~~ 191 (202)
T 4fle_A 131 IEKLESPDLLWLLQQTGDEVLDY-RQAVAYY---TPCRQTVESGGNHAFVGF---DHYFSPIVTFLGL 191 (202)
T ss_dssp CSSCSCGGGEEEEEETTCSSSCH-HHHHHHT---TTSEEEEESSCCTTCTTG---GGGHHHHHHHHTC
T ss_pred hhhhccCceEEEEEeCCCCCCCH-HHHHHHh---hCCEEEEECCCCcCCCCH---HHHHHHHHHHHhh
Confidence 000 000 3333332 256899999999998643 3467888888864
No 327
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=98.89 E-value=1.8e-08 Score=103.71 Aligned_cols=109 Identities=17% Similarity=0.104 Sum_probs=74.6
Q ss_pred CeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCC
Q 005240 492 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGD 571 (706)
Q Consensus 492 g~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~ 571 (706)
+..+....+-+. .|+||++||.+.. ...+...+...||.|+..+.+ |+|.
T Consensus 69 ~~~~~~~~~g~~---------~~~vv~~hG~~~~------------------~~~~~~~~~~lg~~Vi~~D~~---G~G~ 118 (330)
T 3p2m_A 69 AGAISALRWGGS---------APRVIFLHGGGQN------------------AHTWDTVIVGLGEPALAVDLP---GHGH 118 (330)
T ss_dssp ETTEEEEEESSS---------CCSEEEECCTTCC------------------GGGGHHHHHHSCCCEEEECCT---TSTT
T ss_pred CceEEEEEeCCC---------CCeEEEECCCCCc------------------cchHHHHHHHcCCeEEEEcCC---CCCC
Confidence 335666665332 2678899996421 012334445579999996665 4454
Q ss_pred CCC---chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 572 KLP---NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 572 ~~~---~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
+.. .........+|+.++++.+ +.+++.++|||+||++++.++.++|++++++|+.++.
T Consensus 119 S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 180 (330)
T 3p2m_A 119 SAWREDGNYSPQLNSETLAPVLREL------APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVT 180 (330)
T ss_dssp SCCCSSCBCCHHHHHHHHHHHHHHS------STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHh------CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCC
Confidence 432 1223455666776666654 3568999999999999999999999999999999864
No 328
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.89 E-value=5e-07 Score=89.66 Aligned_cols=193 Identities=16% Similarity=0.093 Sum_probs=121.6
Q ss_pred CCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCC-ccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCC
Q 005240 42 GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPL 120 (706)
Q Consensus 42 G~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~-~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~ 120 (706)
|.+|+|+.. ..|++++++++..+.+...+. ..-...+..++|+|+++.|++.-.
T Consensus 1 ~~~l~~~~~-----------~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~-------------- 55 (267)
T 1npe_A 1 GTHLLFAQT-----------GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI-------------- 55 (267)
T ss_dssp CEEEEEEEE-----------EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET--------------
T ss_pred CcEEEEEcC-----------CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC--------------
Confidence 567777542 579999998876442210000 000012457899998888887631
Q ss_pred CCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecC-CC-ceEeeeeeCCCCcEEEEEeeccC
Q 005240 121 GPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRP 197 (706)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~ 197 (706)
....|++++++| ..+.+. .. .....++++|+++.|+++...
T Consensus 56 ----------------------------------~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~-- 99 (267)
T 1npe_A 56 ----------------------------------SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ-- 99 (267)
T ss_dssp ----------------------------------TTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT--
T ss_pred ----------------------------------CCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC--
Confidence 126799999976 444333 23 567889999999999877644
Q ss_pred cccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccce
Q 005240 198 YSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDI 277 (706)
Q Consensus 198 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~ 277 (706)
...|.++++++...+.+..... ..+..++++|++.. ||+..... ....
T Consensus 100 ----------~~~I~~~~~~g~~~~~~~~~~~------------~~P~~i~vd~~~g~-lyv~~~~~---------~~~~ 147 (267)
T 1npe_A 100 ----------LDRIEVAKMDGTQRRVLFDTGL------------VNPRGIVTDPVRGN-LYWTDWNR---------DNPK 147 (267)
T ss_dssp ----------TTEEEEEETTSCSCEEEECSSC------------SSEEEEEEETTTTE-EEEEECCS---------SSCE
T ss_pred ----------CCEEEEEEcCCCCEEEEEECCC------------CCccEEEEeeCCCE-EEEEECCC---------CCcE
Confidence 2479999998765555432211 12447899998776 77763210 1235
Q ss_pred eeeecCCCCCCCCceEEeec-ccccccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 278 IYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 278 l~~~d~~~~~~~~~~~l~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
|++++. ++...+.+... -.....++|++|+..|+++.. ...+|+++++++
T Consensus 148 I~~~~~---dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~---~~~~I~~~~~~g 198 (267)
T 1npe_A 148 IETSHM---DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDA---GTHRAECLNPAQ 198 (267)
T ss_dssp EEEEET---TSCCCEEEECTTCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTE
T ss_pred EEEEec---CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEEC---CCCEEEEEecCC
Confidence 777777 55555555422 234567889999988887642 345799999987
No 329
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.88 E-value=1.9e-07 Score=95.77 Aligned_cols=212 Identities=11% Similarity=0.035 Sum_probs=125.8
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICL 85 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~ 85 (706)
.|+..+.+. ++.+.+. ++ ..+..+.|+|||+.++... ..|++++.++++.+++........
T Consensus 72 ~i~~~d~~~----~~~~~~~-~~--~~v~~i~~~~dg~l~v~~~------------~gl~~~d~~~g~~~~~~~~~~~~~ 132 (326)
T 2ghs_A 72 ELHELHLAS----GRKTVHA-LP--FMGSALAKISDSKQLIASD------------DGLFLRDTATGVLTLHAELESDLP 132 (326)
T ss_dssp EEEEEETTT----TEEEEEE-CS--SCEEEEEEEETTEEEEEET------------TEEEEEETTTCCEEEEECSSTTCT
T ss_pred EEEEEECCC----CcEEEEE-CC--CcceEEEEeCCCeEEEEEC------------CCEEEEECCCCcEEEEeeCCCCCC
Confidence 456666644 6655554 33 3477889999998766531 259999999998877653321100
Q ss_pred cccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC
Q 005240 86 NAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD 165 (706)
Q Consensus 86 ~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~ 165 (706)
...+..+.++|||+. ++........ .....||+++ +
T Consensus 133 ~~~~~~i~~d~~G~l-~v~~~~~~~~------------------------------------------~~~~~l~~~~-~ 168 (326)
T 2ghs_A 133 GNRSNDGRMHPSGAL-WIGTMGRKAE------------------------------------------TGAGSIYHVA-K 168 (326)
T ss_dssp TEEEEEEEECTTSCE-EEEEEETTCC------------------------------------------TTCEEEEEEE-T
T ss_pred CCCCCCEEECCCCCE-EEEeCCCcCC------------------------------------------CCceEEEEEe-C
Confidence 112567889999984 4443210000 0226899999 7
Q ss_pred CCceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC--CC-ee---EEcccCCCCCCCCcccC
Q 005240 166 GTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD--GK-LV---RELCDLPPAEDIPVCYN 238 (706)
Q Consensus 166 g~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~~---~~l~~~~~~~~~p~~~~ 238 (706)
|+.+.+... .....++|||||+.|++.... ...|++++++ ++ .. +.+.......
T Consensus 169 g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~------- 229 (326)
T 2ghs_A 169 GKVTKLFADISIPNSICFSPDGTTGYFVDTK------------VNRLMRVPLDARTGLPTGKAEVFIDSTGIK------- 229 (326)
T ss_dssp TEEEEEEEEESSEEEEEECTTSCEEEEEETT------------TCEEEEEEBCTTTCCBSSCCEEEEECTTSS-------
T ss_pred CcEEEeeCCCcccCCeEEcCCCCEEEEEECC------------CCEEEEEEcccccCCcccCceEEEECCCCC-------
Confidence 766655443 455689999999999887543 2479999986 43 21 2222211111
Q ss_pred ccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceec-CCCceEEEEe
Q 005240 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWC-DDSLALVNET 317 (706)
Q Consensus 239 ~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~ws-pDg~~l~~~~ 317 (706)
..+..+.+.++|. |++.. .. ...|++++. ++...+.+......+..++|+ +|++.|++.+
T Consensus 230 ---~~p~gi~~d~~G~--lwva~-~~----------~~~v~~~d~---~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 230 ---GGMDGSVCDAEGH--IWNAR-WG----------EGAVDRYDT---DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp ---SEEEEEEECTTSC--EEEEE-ET----------TTEEEEECT---TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred ---CCCCeeEECCCCC--EEEEE-eC----------CCEEEEECC---CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 1123567888885 54332 11 124778776 443334444334457788898 8888887765
Q ss_pred e
Q 005240 318 W 318 (706)
Q Consensus 318 ~ 318 (706)
.
T Consensus 291 ~ 291 (326)
T 2ghs_A 291 A 291 (326)
T ss_dssp B
T ss_pred c
Confidence 3
No 330
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=98.88 E-value=2.2e-08 Score=99.93 Aligned_cols=118 Identities=18% Similarity=0.222 Sum_probs=82.9
Q ss_pred EEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCc
Q 005240 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (706)
Q Consensus 487 ~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (706)
+...||..|....+-|++ -|.||++||.+.. ...| ...+..|++.||.|++.+.+
T Consensus 4 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~~-----------~~~w----~~~~~~L~~~g~~vi~~D~~-- 58 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGPRD--------APVIHFHHGWPLS-----------ADDW----DAQLLFFLAHGYRVVAHDRR-- 58 (276)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT--
T ss_pred EECCCCcEEEEEecCCCC--------CCeEEEECCCCcc-----------hhHH----HHHHHHHHhCCCEEEEecCC--
Confidence 455688888877665432 2568889996421 0111 13456788899999996665
Q ss_pred CCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC-CCceeEEEeccCC
Q 005240 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGS 636 (706)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~ 636 (706)
|+|.+... ....+...+|+.++++.+ +.+++.++||||||.+++.++.++ |++++++|+.++.
T Consensus 59 -G~G~S~~~~~~~~~~~~~~d~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 124 (276)
T 1zoi_A 59 -GHGRSSQVWDGHDMDHYADDVAAVVAHL------GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAV 124 (276)
T ss_dssp -TSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCC
T ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCC
Confidence 55655432 224566778888887776 236899999999999999988776 9999999988753
No 331
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.88 E-value=5e-08 Score=114.27 Aligned_cols=202 Identities=12% Similarity=0.078 Sum_probs=124.6
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
.+..++|||||++||.... + ..|.+++..+++......+.. .+..+.|+| |++|+..+.
T Consensus 19 ~V~~lafspdg~~lAsgs~--------D--g~I~lw~~~~~~~~~~~~~~~-----~V~~l~fsp-g~~L~S~s~----- 77 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATV--------T--GEVHIYGQQQVEVVIKLEDRS-----AIKEMRFVK-GIYLVVINA----- 77 (902)
T ss_dssp CEEEEEEETTTTEEEEEET--------T--SEEEEECSTTCEEEEECSSCC-----CEEEEEEET-TTEEEEEET-----
T ss_pred CcEEEEECCCCCEEEEEeC--------C--CEEEEEeCCCcEEEEEcCCCC-----CEEEEEEcC-CCEEEEEEC-----
Confidence 4889999999999988653 2 467777887766544332222 378999999 887776542
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCCceEeeeeeCCCCcEE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTPAVYTAVEPSPDQKYV 189 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~~~~~~~~~SpDG~~i 189 (706)
.+.|.++|+ +++ ...+.....+..++|+|||++|
T Consensus 78 --------------------------------------------D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l 113 (902)
T 2oaj_A 78 --------------------------------------------KDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWM 113 (902)
T ss_dssp --------------------------------------------TCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEE
T ss_pred --------------------------------------------cCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEE
Confidence 156788888 453 3344333678899999999999
Q ss_pred EEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCC--CCCcccCccCCCCcceeeecCCCceEEEEEeccCCC
Q 005240 190 LITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE--DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (706)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~--~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~ 267 (706)
+..... ..|.+||+.+++........... ..+ ......+..++|+|++...|+ +..
T Consensus 114 ~sgs~d-------------g~V~lwd~~~~~~~~~~i~~~~~~~~~~---~~h~~~V~sl~~sp~~~~~l~-~g~----- 171 (902)
T 2oaj_A 114 LIGLQN-------------GSMIVYDIDRDQLSSFKLDNLQKSSFFP---AARLSPIVSIQWNPRDIGTVL-ISY----- 171 (902)
T ss_dssp EEEETT-------------SCEEEEETTTTEEEEEEECCHHHHHTCS---SSCCCCCCEEEEETTEEEEEE-EEC-----
T ss_pred EEEcCC-------------CcEEEEECCCCccccceecccccccccc---ccCCCCeEEEEEccCCCCEEE-EEe-----
Confidence 876543 37999999977653221100000 000 000123558899997654243 321
Q ss_pred CccccCccceeeeecCCCCCCCCceE-Eeec------------------ccccccceecCCCceEEEEeeccccceEEEE
Q 005240 268 ANVEVSPRDIIYTQPAEPAEGEKPEI-LHKL------------------DLRFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (706)
Q Consensus 268 ~~~~~~~~~~l~~~d~~~~~~~~~~~-l~~~------------------~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~ 328 (706)
..+.+ +||+ .+++... +... ...+..+.|+|||+.|+..+.+ + .|.+
T Consensus 172 ------~dg~v-lWd~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D--g--~i~l 237 (902)
T 2oaj_A 172 ------EYVTL-TYSL---VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED--N--SLVF 237 (902)
T ss_dssp ------SSCEE-EEET---TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT--C--CEEE
T ss_pred ------CCCcE-EEEC---CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC--C--eEEE
Confidence 11247 8888 4444332 2211 2457889999999988876532 2 3666
Q ss_pred EcCCCC
Q 005240 329 VCPGSK 334 (706)
Q Consensus 329 ~d~~~~ 334 (706)
+|+.++
T Consensus 238 Wd~~~g 243 (902)
T 2oaj_A 238 WDANSG 243 (902)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 677663
No 332
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=98.88 E-value=3e-08 Score=98.61 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=67.4
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc---hhhHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 589 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~D~~~~ 589 (706)
-|.||++||.+.. ...| ......| +.+|.|+..+.+ |+|.+... ........+|+.+.
T Consensus 15 ~~~vvllHG~~~~-----------~~~w----~~~~~~L-~~~~~vi~~Dl~---G~G~S~~~~~~~~~~~~~a~dl~~~ 75 (268)
T 3v48_A 15 APVVVLISGLGGS-----------GSYW----LPQLAVL-EQEYQVVCYDQR---GTGNNPDTLAEDYSIAQMAAELHQA 75 (268)
T ss_dssp CCEEEEECCTTCC-----------GGGG----HHHHHHH-HTTSEEEECCCT---TBTTBCCCCCTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCcc-----------HHHH----HHHHHHH-hhcCeEEEECCC---CCCCCCCCccccCCHHHHHHHHHHH
Confidence 3678899995321 1111 1223334 567999996665 55655332 22355666777666
Q ss_pred HHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 590 ~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
++.+ +.+++.++||||||.+++.++.++|++++++|+.++.
T Consensus 76 l~~l------~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~ 116 (268)
T 3v48_A 76 LVAA------GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGW 116 (268)
T ss_dssp HHHT------TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred HHHc------CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccc
Confidence 5543 2368999999999999999999999999999988764
No 333
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=98.87 E-value=1.9e-08 Score=101.84 Aligned_cols=117 Identities=15% Similarity=0.081 Sum_probs=81.8
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.||..++...+-|++ -|.||++||.+.. ...| ....+..|++.||.|+..+.+ |+
T Consensus 8 ~~g~~l~y~~~G~~~--------~~~vvllHG~~~~-----------~~~w---~~~~~~~L~~~G~~vi~~D~r---G~ 62 (298)
T 1q0r_A 8 SGDVELWSDDFGDPA--------DPALLLVMGGNLS-----------ALGW---PDEFARRLADGGLHVIRYDHR---DT 62 (298)
T ss_dssp ETTEEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGS---CHHHHHHHHTTTCEEEEECCT---TS
T ss_pred cCCeEEEEEeccCCC--------CCeEEEEcCCCCC-----------ccch---HHHHHHHHHhCCCEEEeeCCC---CC
Confidence 478888877664421 2568889996421 1111 112346788899999996655 55
Q ss_pred CCCCC---c--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 570 GDKLP---N--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 570 g~~~~---~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
|.+.. . ....+...+|+.+.++++ +.+++.++||||||.+++.++.++|++++++|+.++..
T Consensus 63 G~S~~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (298)
T 1q0r_A 63 GRSTTRDFAAHPYGFGELAADAVAVLDGW------GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGG 129 (298)
T ss_dssp TTSCCCCTTTSCCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCCCCCCCCcCCcCHHHHHHHHHHHHHHh------CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccC
Confidence 55543 1 123566777888877765 34689999999999999999999999999999877643
No 334
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=98.87 E-value=2.1e-09 Score=117.64 Aligned_cols=134 Identities=19% Similarity=0.253 Sum_probs=88.9
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHH-HHHH-HCCeEEEEcCCCCc
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSS-LIFL-ARRFAVLAGPSIPI 566 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~-~~G~~v~~~~~~~~ 566 (706)
+.|+..+ .+|+|....++ .++|+||++|||++..++. ..+. ...++ +.++ ..|++|+..+||..
T Consensus 102 sedcl~l--~v~~P~~~~~~--~~~Pviv~iHGGg~~~g~~--------~~~~--~~~l~~~~l~~~~~~vvv~~nYRl~ 167 (544)
T 1thg_A 102 NEDCLYL--NVFRPAGTKPD--AKLPVMVWIYGGAFVYGSS--------AAYP--GNSYVKESINMGQPVVFVSINYRTG 167 (544)
T ss_dssp CSCCCEE--EEEEETTCCTT--CCEEEEEEECCCTTCCSGG--------GGCC--SHHHHHHHHHTTCCCEEEEECCCCH
T ss_pred CCCCeEE--EEEeCCCCCCC--CCCcEEEEECCCccccCCc--------cccC--chHHHHHHhhcCCCEEEEeCCCCCC
Confidence 4566444 57889764332 2589999999998754332 1111 11122 2233 26899999898854
Q ss_pred C-CCCCCCC--chhhHHHHHHHHHHHHHHHHHc--CC-CCCCcEEEEEechHHHHHHHHHHhC--------CCceeEEEe
Q 005240 567 I-GEGDKLP--NDRFVEQLVSSAEAAVEEVVRR--GV-ADPSRIAVGGHSYGAFMTAHLLAHA--------PHLFCCGIA 632 (706)
Q Consensus 567 ~-g~g~~~~--~~~~~~~~~~D~~~~~~~l~~~--~~-id~~~i~i~G~S~GG~~a~~~~~~~--------p~~~~a~v~ 632 (706)
. |+..... ....++..+.|+.+|++|++++ .+ .|++||.|+|+|+||++++.++... ..+|+++|+
T Consensus 168 ~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~ 247 (544)
T 1thg_A 168 PFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAIL 247 (544)
T ss_dssp HHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEE
T ss_pred cccCCCcccccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEE
Confidence 3 2211000 0112345689999999999885 22 7999999999999999999888752 468999999
Q ss_pred ccCC
Q 005240 633 RSGS 636 (706)
Q Consensus 633 ~~~~ 636 (706)
.+|.
T Consensus 248 ~Sg~ 251 (544)
T 1thg_A 248 QSGG 251 (544)
T ss_dssp ESCC
T ss_pred eccc
Confidence 9984
No 335
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=98.86 E-value=3.8e-08 Score=98.08 Aligned_cols=118 Identities=19% Similarity=0.191 Sum_probs=82.0
Q ss_pred EEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCc
Q 005240 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (706)
Q Consensus 487 ~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (706)
+...||..+....+-|++ -|.||++||.+.. ...| ...+..|++.||.|+..+.+
T Consensus 3 ~~~~~g~~l~y~~~g~~~--------~~~vvllHG~~~~-----------~~~w----~~~~~~l~~~g~~vi~~D~~-- 57 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGPRD--------GLPVVFHHGWPLS-----------ADDW----DNQMLFFLSHGYRVIAHDRR-- 57 (275)
T ss_dssp EECTTSCEEEEEEESCTT--------SCEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT--
T ss_pred EEccCCCEEEEEEcCCCC--------CceEEEECCCCCc-----------hhhH----HHHHHHHHHCCceEEEEcCC--
Confidence 456688888876664432 2568889996421 0111 13456788899999996665
Q ss_pred CCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC-CCceeEEEeccCC
Q 005240 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGS 636 (706)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~ 636 (706)
|+|.+... ....+...+|+.++++.+ +.+++.++||||||.+++.++.++ |++++++|..++.
T Consensus 58 -G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 123 (275)
T 1a88_A 58 -GHGRSDQPSTGHDMDTYAADVAALTEAL------DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAV 123 (275)
T ss_dssp -TSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCC
T ss_pred -cCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCC
Confidence 55555332 224566778888877766 235899999999999999877776 9999999988753
No 336
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=98.86 E-value=3.7e-08 Score=102.70 Aligned_cols=80 Identities=16% Similarity=0.222 Sum_probs=57.4
Q ss_pred HHHCCeEEEEcCCCCcCCCCCCCCc---------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEEEechHHH
Q 005240 551 FLARRFAVLAGPSIPIIGEGDKLPN---------------DRFVEQLVSSAEAAVEEVVRRGVADPSRI-AVGGHSYGAF 614 (706)
Q Consensus 551 l~~~G~~v~~~~~~~~~g~g~~~~~---------------~~~~~~~~~D~~~~~~~l~~~~~id~~~i-~i~G~S~GG~ 614 (706)
|++.||.|+..+.+|. ++|.+... ........+|+.++++.+ +.+++ .++||||||.
T Consensus 85 l~~~g~~vi~~D~~G~-~~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~Gg~ 157 (366)
T 2pl5_A 85 FDTNQYFIICSNVIGG-CKGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESL------GIEKLFCVAGGSMGGM 157 (366)
T ss_dssp EETTTCEEEEECCTTC-SSSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT------TCSSEEEEEEETHHHH
T ss_pred ccccccEEEEecCCCc-ccCCCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHHc------CCceEEEEEEeCccHH
Confidence 4578999999777652 03333210 113455666666666543 34688 8999999999
Q ss_pred HHHHHHHhCCCceeEEEeccCCC
Q 005240 615 MTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 615 ~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
+++.++.++|++++++|+.++..
T Consensus 158 ia~~~a~~~p~~v~~lvl~~~~~ 180 (366)
T 2pl5_A 158 QALEWSIAYPNSLSNCIVMASTA 180 (366)
T ss_dssp HHHHHHHHSTTSEEEEEEESCCS
T ss_pred HHHHHHHhCcHhhhheeEeccCc
Confidence 99999999999999999988753
No 337
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.86 E-value=6.1e-07 Score=92.95 Aligned_cols=246 Identities=8% Similarity=0.008 Sum_probs=137.3
Q ss_pred cceeEeecCCCCCCCCe-eeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 5 TGIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
..|.|+++... +... +.+.. ....+..+.|||||++|+.... ...|.++|+.+++..++..+...
T Consensus 64 g~i~iw~~~~~--~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~ 129 (368)
T 3mmy_A 64 NDVRCWEVQDS--GQTIPKAQQM--HTGPVLDVCWSDDGSKVFTASC----------DKTAKMWDLSSNQAIQIAQHDAP 129 (368)
T ss_dssp SEEEEEEECTT--SCEEEEEEEE--CSSCEEEEEECTTSSEEEEEET----------TSEEEEEETTTTEEEEEEECSSC
T ss_pred CcEEEEEcCCC--CceeEEEecc--ccCCEEEEEECcCCCEEEEEcC----------CCcEEEEEcCCCCceeeccccCc
Confidence 35788888651 1221 22332 2335889999999999987642 35788889998887776544432
Q ss_pred cccccccceEE--ecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 84 CLNAVFGSFVW--VNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 84 ~~~~~~~~~~w--SpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
+..+.| +|+++.|+..+. .+.|.+
T Consensus 130 -----v~~~~~~~~~~~~~l~~~~~-------------------------------------------------dg~i~v 155 (368)
T 3mmy_A 130 -----VKTIHWIKAPNYSCVMTGSW-------------------------------------------------DKTLKF 155 (368)
T ss_dssp -----EEEEEEEECSSCEEEEEEET-------------------------------------------------TSEEEE
T ss_pred -----eEEEEEEeCCCCCEEEEccC-------------------------------------------------CCcEEE
Confidence 778999 899998877642 157888
Q ss_pred Ecc-CCC-ceecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeE--EcccCCCCCCCCccc
Q 005240 162 GSL-DGT-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR--ELCDLPPAEDIPVCY 237 (706)
Q Consensus 162 ~~l-~g~-~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~l~~~~~~~~~p~~~ 237 (706)
+++ +++ ...+........+.++++ .++..... ..+.+|++...... .+.....
T Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------------~~i~~~~~~~~~~~~~~~~~~~~-------- 212 (368)
T 3mmy_A 156 WDTRSSNPMMVLQLPERCYCADVIYP--MAVVATAE-------------RGLIVYQLENQPSEFRRIESPLK-------- 212 (368)
T ss_dssp ECSSCSSCSEEEECSSCEEEEEEETT--EEEEEEGG-------------GCEEEEECSSSCEEEEECCCSCS--------
T ss_pred EECCCCcEEEEEecCCCceEEEecCC--eeEEEeCC-------------CcEEEEEeccccchhhhcccccc--------
Confidence 898 553 334433344444444443 45444432 36888988754322 2211110
Q ss_pred CccCCCCcceeeecCCCc--eEEEEEeccCCCCccccCccceeeeecCCCCCCCC----ceEEeeccc------------
Q 005240 238 NSVREGMRSISWRADKPS--TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK----PEILHKLDL------------ 299 (706)
Q Consensus 238 ~~~~~g~~~~~~spdg~~--~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~----~~~l~~~~~------------ 299 (706)
.....+.+.++... ..+.+.. ..+.+.+++. .... ...+.....
T Consensus 213 ----~~~~~~~~~~~~~~~~~~~~~~~-----------~dg~i~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (368)
T 3mmy_A 213 ----HQHRCVAIFKDKQNKPTGFALGS-----------IEGRVAIHYI---NPPNPAKDNFTFKCHRSNGTNTSAPQDIY 274 (368)
T ss_dssp ----SCEEEEEEEECTTSCEEEEEEEE-----------TTSEEEEEES---SCSCHHHHSEEEECSEEC----CCCEEEC
T ss_pred ----CCCceEEEcccCCCCCCeEEEec-----------CCCcEEEEec---CCCCccccceeeeeeeccccccccccccc
Confidence 01112233333321 1121211 1124666766 3322 122222222
Q ss_pred ccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 300 RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 300 ~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
.+..+.|+||++.|+..+.+ ..|.++|+.++ +....+..... ....+.|+|||++|+...
T Consensus 275 ~v~~~~~sp~~~~l~s~~~d----g~i~iwd~~~~--~~~~~~~~~~~------~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSD----GRFSFWDKDAR--TKLKTSEQLDQ------PISACCFNHNGNIFAYAS 334 (368)
T ss_dssp CEEEEEECTTTCCEEEEETT----SCEEEEETTTT--EEEEECCCCSS------CEEEEEECTTSSCEEEEE
T ss_pred ceEEEEEecCCCEEEEEccC----CeEEEEECCCC--cEEEEecCCCC------CceEEEECCCCCeEEEEe
Confidence 57889999999988876522 23667777763 22222221111 122478999999988875
No 338
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=98.85 E-value=1.8e-08 Score=105.40 Aligned_cols=77 Identities=17% Similarity=0.180 Sum_probs=51.8
Q ss_pred HHHHCCeEEEEcCCCCc------C--CCCCCCCc------------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEE-EEE
Q 005240 550 IFLARRFAVLAGPSIPI------I--GEGDKLPN------------DRFVEQLVSSAEAAVEEVVRRGVADPSRIA-VGG 608 (706)
Q Consensus 550 ~l~~~G~~v~~~~~~~~------~--g~g~~~~~------------~~~~~~~~~D~~~~~~~l~~~~~id~~~i~-i~G 608 (706)
.|++.||.|++++.+|. . +.|..... ........+|+.+.++.+ +.+++. |+|
T Consensus 80 ~l~~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l------~~~~~~ilvG 153 (377)
T 3i1i_A 80 AIDTNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDM------GIARLHAVMG 153 (377)
T ss_dssp SEETTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHT------TCCCBSEEEE
T ss_pred ccccccEEEEEecccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHc------CCCcEeeEEe
Confidence 45678999999776632 0 11111110 112345556665555433 345775 999
Q ss_pred echHHHHHHHHHHhCCCceeEEEe
Q 005240 609 HSYGAFMTAHLLAHAPHLFCCGIA 632 (706)
Q Consensus 609 ~S~GG~~a~~~~~~~p~~~~a~v~ 632 (706)
|||||.+++.++.++|++++++|+
T Consensus 154 hS~Gg~ia~~~a~~~p~~v~~lvl 177 (377)
T 3i1i_A 154 PSAGGMIAQQWAVHYPHMVERMIG 177 (377)
T ss_dssp ETHHHHHHHHHHHHCTTTBSEEEE
T ss_pred eCHhHHHHHHHHHHChHHHHHhcc
Confidence 999999999999999999999999
No 339
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=98.85 E-value=1.1e-08 Score=95.12 Aligned_cols=153 Identities=10% Similarity=-0.037 Sum_probs=92.6
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCe---EEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRF---AVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 590 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~ 590 (706)
|+||++||.+.. ...+ ..+...|++.|| .|+..+.+ |+|.+. ........+++..
T Consensus 4 ~~vv~~HG~~~~-----------~~~~----~~~~~~l~~~G~~~~~v~~~d~~---g~g~s~--~~~~~~~~~~~~~-- 61 (181)
T 1isp_A 4 NPVVMVHGIGGA-----------SFNF----AGIKSYLVSQGWSRDKLYAVDFW---DKTGTN--YNNGPVLSRFVQK-- 61 (181)
T ss_dssp CCEEEECCTTCC-----------GGGG----HHHHHHHHHTTCCGGGEEECCCS---CTTCCH--HHHHHHHHHHHHH--
T ss_pred CeEEEECCcCCC-----------HhHH----HHHHHHHHHcCCCCccEEEEecC---CCCCch--hhhHHHHHHHHHH--
Confidence 678899996311 1111 245677888998 47775654 344331 1122333333333
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC--CCceeEEEeccCCCCCCC------------CCccc---hHHHHHH
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--PHLFCCGIARSGSYNKTL------------TPFGF---QAERFFD 653 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~--p~~~~a~v~~~~~~d~~~------------~~~~~---~~~~~~~ 653 (706)
+.++ .+.+++.++||||||.+++.++.+. |++++++|+.+|...... .|... ..+.+..
T Consensus 62 --~~~~--~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~p~l~i~G~~D~~v~ 137 (181)
T 1isp_A 62 --VLDE--TGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALPGTDPNQKILYTSIYSSADMIVM 137 (181)
T ss_dssp --HHHH--HCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBCCCCSCTTCCCEEEEEEETTCSSSC
T ss_pred --HHHH--cCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCcccccccccCCCCCCccCCcEEEEecCCCcccc
Confidence 3332 2457899999999999999999988 889999999998753211 01000 0000000
Q ss_pred HHHhCCCcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHH
Q 005240 654 ALKGHGALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 694 (706)
Q Consensus 654 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~ 694 (706)
.-...-...+++++++++|.+.... .++.+.+.+||++.
T Consensus 138 ~~~~~~~~~~~~~~~~~gH~~~~~~--~~~~~~i~~fl~~~ 176 (181)
T 1isp_A 138 NYLSRLDGARNVQIHGVGHIGLLYS--SQVNSLIKEGLNGG 176 (181)
T ss_dssp HHHHCCBTSEEEEESSCCTGGGGGC--HHHHHHHHHHHTTT
T ss_pred cccccCCCCcceeeccCchHhhccC--HHHHHHHHHHHhcc
Confidence 0011223468999999999876433 36888888888764
No 340
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=98.84 E-value=5.6e-08 Score=97.34 Aligned_cols=114 Identities=9% Similarity=0.035 Sum_probs=74.5
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCC
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 568 (706)
..+|..++.... + . -|.||++||.+.. ...|. .....|++.||.|+..+.+ |
T Consensus 13 ~~~g~~l~y~~~---G----~---g~~vvllHG~~~~-----------~~~w~----~~~~~l~~~g~~vi~~D~~---G 64 (281)
T 3fob_A 13 NQAPIEIYYEDH---G----T---GKPVVLIHGWPLS-----------GRSWE----YQVPALVEAGYRVITYDRR---G 64 (281)
T ss_dssp TTEEEEEEEEEE---S----S---SEEEEEECCTTCC-----------GGGGT----TTHHHHHHTTEEEEEECCT---T
T ss_pred CCCceEEEEEEC---C----C---CCeEEEECCCCCc-----------HHHHH----HHHHHHHhCCCEEEEeCCC---C
Confidence 446666664443 1 1 2457789997521 11221 2356778899999996665 5
Q ss_pred CCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHh-CCCceeEEEeccCC
Q 005240 569 EGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH-APHLFCCGIARSGS 636 (706)
Q Consensus 569 ~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~-~p~~~~a~v~~~~~ 636 (706)
+|.+... ....+...+|+.+.++.+ +.+++.++||||||.+++.++.+ .|++++.++..++.
T Consensus 65 ~G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~ 129 (281)
T 3fob_A 65 FGKSSQPWEGYEYDTFTSDLHQLLEQL------ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAV 129 (281)
T ss_dssp STTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CCCCCCCccccCHHHHHHHHHHHHHHc------CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCC
Confidence 5655432 223556677777776655 33689999999999877766555 58999999987754
No 341
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.84 E-value=8.6e-08 Score=97.87 Aligned_cols=227 Identities=17% Similarity=0.244 Sum_probs=127.0
Q ss_pred cceeEeecCCCCCCCCeeeeecCCC-CCcccceeeCC--CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCC
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP 81 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~~~~SP--DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~ 81 (706)
..|.|.++.. ++...+..+.. ...+..++|+| +|+.||..+. + ..|.++|+.+++..++....
T Consensus 35 ~~v~lwd~~~----~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~--------D--~~v~iWd~~~~~~~~~~~~~ 100 (316)
T 3bg1_A 35 RSVKIFDVRN----GGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY--------D--RKVIIWREENGTWEKSHEHA 100 (316)
T ss_dssp TEEEEEEEET----TEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET--------T--SCEEEECCSSSCCCEEEEEC
T ss_pred CeEEEEEecC----CCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC--------C--CEEEEEECCCCcceEEEEcc
Confidence 3588888866 54433332322 23588899997 4888877642 3 45666788776432221111
Q ss_pred CccccccccceEEecC--CcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceE
Q 005240 82 DICLNAVFGSFVWVNN--STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQL 159 (706)
Q Consensus 82 ~~~~~~~~~~~~wSpD--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l 159 (706)
.+ ...+..+.|+|| |.+|+..+.+ +.|
T Consensus 101 ~h--~~~V~~v~~~p~~~g~~lasgs~D-------------------------------------------------~~i 129 (316)
T 3bg1_A 101 GH--DSSVNSVCWAPHDYGLILACGSSD-------------------------------------------------GAI 129 (316)
T ss_dssp CC--SSCCCEEEECCTTTCSCEEEECSS-------------------------------------------------SCE
T ss_pred CC--CCceEEEEECCCCCCcEEEEEcCC-------------------------------------------------CCE
Confidence 11 113778999998 7777765421 345
Q ss_pred EEEccCC--Cce--ec-CCC-ceEeeeeeCCCC-----------------cEEEEEeeccCcccccccccccceEEEEec
Q 005240 160 VLGSLDG--TAK--DF-GTP-AVYTAVEPSPDQ-----------------KYVLITSMHRPYSYKVPCARFSQKVQVWTT 216 (706)
Q Consensus 160 ~~~~l~g--~~~--~l-t~~-~~~~~~~~SpDG-----------------~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~ 216 (706)
.++++.+ ... .. ... ..+..++|+|++ ++|+..+. ...|.+|++
T Consensus 130 ~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~-------------D~~v~lWd~ 196 (316)
T 3bg1_A 130 SLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGC-------------DNLIKLWKE 196 (316)
T ss_dssp EEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBT-------------TSBCCEEEE
T ss_pred EEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecC-------------CCeEEEEEe
Confidence 5566632 221 11 222 456788899984 34432221 247889998
Q ss_pred CCC-eeEEcccCCCCCCCCcccCccCCCCcceeeecCCC---ceEEEEEeccCCCCccccCccceeeeecCCCCCCCC--
Q 005240 217 DGK-LVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP---STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-- 290 (706)
Q Consensus 217 ~~~-~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~---~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-- 290 (706)
.+. ..+.+....+.. ..+..++|+|++. ..|+-. .. ...|.+|+++....+.
T Consensus 197 ~~~~~~~~~~~l~~h~----------~~V~~v~~sp~~~~~~~~las~-s~-----------D~~v~iw~~~~~~~~~~~ 254 (316)
T 3bg1_A 197 EEDGQWKEEQKLEAHS----------DWVRDVAWAPSIGLPTSTIASC-SQ-----------DGRVFIWTCDDASSNTWS 254 (316)
T ss_dssp CTTSCEEEEECCBCCS----------SCEEEEECCCCSSCSCCEEEEE-ET-----------TCEEEEEECSSTTCCCCB
T ss_pred CCCCccceeeecccCC----------CceEEEEecCCCCCCCceEEEE-cC-----------CCeEEEEEccCccccchh
Confidence 743 222222221111 2255789999972 214322 11 1247788773111111
Q ss_pred ceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 291 PEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 291 ~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
.+.+......+..++|+|||+.|+..+. ++..+||..+..+
T Consensus 255 ~~~~~~~~~~v~~v~~sp~g~~las~~~--D~~v~lw~~~~~g 295 (316)
T 3bg1_A 255 PKLLHKFNDVVWHVSWSITANILAVSGG--DNKVTLWKESVDG 295 (316)
T ss_dssp CCEEEECSSCEEEEEECTTTCCEEEEES--SSCEEEEEECTTS
T ss_pred hhhhhcCCCcEEEEEEcCCCCEEEEEcC--CCeEEEEEECCCC
Confidence 2345555778889999999999887653 3566788776553
No 342
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=98.84 E-value=8.4e-08 Score=98.65 Aligned_cols=117 Identities=12% Similarity=0.078 Sum_probs=78.1
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCCCcCCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGE 569 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~ 569 (706)
+|..+.....-|++- +. |-+.||++||++-. ...+. .....|++ .||.|+..+-+ |+
T Consensus 36 ~g~~l~y~~~G~~~~--~~--~g~plvllHG~~~~-----------~~~w~----~~~~~l~~~~~~~Via~D~r---G~ 93 (330)
T 3nwo_A 36 GDHETWVQVTTPENA--QP--HALPLIVLHGGPGM-----------AHNYV----ANIAALADETGRTVIHYDQV---GC 93 (330)
T ss_dssp TTEEEEEEEECCSSC--CT--TCCCEEEECCTTTC-----------CSGGG----GGGGGHHHHHTCCEEEECCT---TS
T ss_pred cCcEEEEEEecCccC--CC--CCCcEEEECCCCCC-----------chhHH----HHHHHhccccCcEEEEECCC---CC
Confidence 788898888876421 11 11237778996421 11111 12334554 69999985554 56
Q ss_pred CCCCC--c--h--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 570 GDKLP--N--D--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 570 g~~~~--~--~--~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
|.+.. . . .......+|+.+.++.+ +.+++.++||||||++++.++.++|++++++|..++
T Consensus 94 G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l------g~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~ 159 (330)
T 3nwo_A 94 GNSTHLPDAPADFWTPQLFVDEFHAVCTAL------GIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNS 159 (330)
T ss_dssp TTSCCCTTSCGGGCCHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESC
T ss_pred CCCCCCCCCccccccHHHHHHHHHHHHHHc------CCCceEEEecCHHHHHHHHHHHhCCccceEEEEecC
Confidence 65543 1 1 13456677888877766 236899999999999999999999999999987654
No 343
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.83 E-value=1e-07 Score=102.11 Aligned_cols=196 Identities=12% Similarity=0.010 Sum_probs=109.4
Q ss_pred ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccC-CCccccccccceEEec-CCcEEEEEecCCCC
Q 005240 33 INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES-PDICLNAVFGSFVWVN-NSTLLIFTIPSSRR 110 (706)
Q Consensus 33 ~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~~~~wSp-Dg~~l~~~~~~~~~ 110 (706)
...+.|+|||+.++... + ++..+.....+..+ .. .+..++|+| ||++|+..+.+
T Consensus 30 ~~~~~f~~~~~~~~~~~--------------~--w~~~g~~~~~~~~~h~~-----~V~~~~~s~~~~~~l~s~s~d--- 85 (437)
T 3gre_A 30 RDYKEFGPIQEIVRSPN--------------M--GNLRGKLIATLMENEPN-----SITSSAVSPGETPYLITGSDQ--- 85 (437)
T ss_dssp GGCGGGCCCCCCCCCCC--------------G--GGCCCCEEEEECTTTTS-----CEEEEEEECSSSCEEEEEETT---
T ss_pred hchhhcCCccccccccc--------------c--ccccceEEeeeccCCCC-----ceEEEEECCCCCCEEEEecCC---
Confidence 34567899999887632 1 23333333344222 22 278899999 99988876421
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-C---CC-ce-ecC-CC-ceEeeeee
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-D---GT-AK-DFG-TP-AVYTAVEP 182 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~---g~-~~-~lt-~~-~~~~~~~~ 182 (706)
+.|.++++ + +. .+ .++ .. ..+..++|
T Consensus 86 ----------------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 119 (437)
T 3gre_A 86 ----------------------------------------------GVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITM 119 (437)
T ss_dssp ----------------------------------------------SEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEE
T ss_pred ----------------------------------------------ceEEEeECcccccCcccceeeeccCCCCEEEEEE
Confidence 45666676 3 32 11 111 12 67889999
Q ss_pred CCCCcEEEEEeeccCcccccccccccceEEEEecC----CCeeEEcccCCCCCCCCcccCc-cCCCCcce--eeecCCCc
Q 005240 183 SPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD----GKLVRELCDLPPAEDIPVCYNS-VREGMRSI--SWRADKPS 255 (706)
Q Consensus 183 SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~l~~~~~~~~~p~~~~~-~~~g~~~~--~~spdg~~ 255 (706)
+||++.|+..+.+ ..|.+|+++ +...+.+....... -.+.+. .......+ .+++|++.
T Consensus 120 ~~~~~~l~s~s~d-------------g~i~vwd~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (437)
T 3gre_A 120 IPNFDAFAVSSKD-------------GQIIVLKVNHYQQESEVKFLNCECIRK--INLKNFGKNEYAVRMRAFVNEEKSL 184 (437)
T ss_dssp CTTSSEEEEEETT-------------SEEEEEEEEEEEETTEEEEEEEEEEEE--EEGGGGSSCCCEEEEEEEECSSCEE
T ss_pred eCCCCEEEEEeCC-------------CEEEEEEeccccCCceeeccccceeEE--EEccCcccccCceEEEEEEcCCCCE
Confidence 9999998866544 378889884 32222211110000 000000 00011122 25566664
Q ss_pred eEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-EEee--cccccccceecCCCceEEEEeeccccceEEEEEcCC
Q 005240 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (706)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (706)
|+... ....|.+||+ .+++.. .+.. ....+..+.|+|+++.|+..+.+ ..|.++|+.
T Consensus 185 -l~~~~------------~d~~i~iwd~---~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~ 244 (437)
T 3gre_A 185 -LVALT------------NLSRVIIFDI---RTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR----GIIDIWDIR 244 (437)
T ss_dssp -EEEEE------------TTSEEEEEET---TTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT----SCEEEEETT
T ss_pred -EEEEe------------CCCeEEEEeC---CCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC----CeEEEEEcC
Confidence 43221 1235889998 455443 3444 46788899999999988876522 236666776
Q ss_pred C
Q 005240 333 S 333 (706)
Q Consensus 333 ~ 333 (706)
+
T Consensus 245 ~ 245 (437)
T 3gre_A 245 F 245 (437)
T ss_dssp T
T ss_pred C
Confidence 6
No 344
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=98.82 E-value=3.7e-08 Score=98.79 Aligned_cols=122 Identities=16% Similarity=0.099 Sum_probs=77.8
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCC-cCC-CCchHHHHHHHCCeEEEEcCCCCcCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSG-MTPTSSLIFLARRFAVLAGPSIPIIG 568 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~~G~~v~~~~~~~~~g 568 (706)
+|..+....+-++. + . -|+||++||.+... .. +.. +....+..|+ .+|.|+..+.+|. |
T Consensus 19 ~~~~l~y~~~G~~~--~-~---~p~vvllHG~~~~~-----------~~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~-G 79 (286)
T 2qmq_A 19 PYGSVTFTVYGTPK--P-K---RPAIFTYHDVGLNY-----------KSCFQPLFRFGDMQEII-QNFVRVHVDAPGM-E 79 (286)
T ss_dssp TTEEEEEEEESCCC--T-T---CCEEEEECCTTCCH-----------HHHHHHHHTSHHHHHHH-TTSCEEEEECTTT-S
T ss_pred CCeEEEEEeccCCC--C-C---CCeEEEeCCCCCCc-----------hhhhhhhhhhchhHHHh-cCCCEEEecCCCC-C
Confidence 67788877765432 1 1 37899999964210 00 000 0000334444 4799988666532 2
Q ss_pred CCCCCCchh----hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 569 EGDKLPNDR----FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 569 ~g~~~~~~~----~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
.+....... ......+|+.++++.+ +..++.++|||+||.+++.++.++|++++++|+.++..
T Consensus 80 ~s~~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 146 (286)
T 2qmq_A 80 EGAPVFPLGYQYPSLDQLADMIPCILQYL------NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDP 146 (286)
T ss_dssp TTCCCCCTTCCCCCHHHHHHTHHHHHHHH------TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCCCCCCCCCCccCHHHHHHHHHHHHHHh------CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCC
Confidence 222211111 4566777777777765 23589999999999999999999999999999998854
No 345
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=98.82 E-value=4.1e-08 Score=91.99 Aligned_cols=103 Identities=15% Similarity=0.118 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCCCC------------CCCcc--
Q 005240 580 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYNKT------------LTPFG-- 645 (706)
Q Consensus 580 ~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d~~------------~~~~~-- 645 (706)
....+|+.++++. .+ +++.++|||+||.+++.++.++|++++++++.+|..... ..|..
T Consensus 59 ~~~~~~~~~~~~~------~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~P~lii 131 (191)
T 3bdv_A 59 DRWVLAIRRELSV------CT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEIDDRIQASPLSVPTLTF 131 (191)
T ss_dssp HHHHHHHHHHHHT------CS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGTCTTTSCSSCCSSCEEEE
T ss_pred HHHHHHHHHHHHh------cC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccccCccccccccCCCCEEEE
Confidence 4445555554443 23 799999999999999999999999999999999865421 01211
Q ss_pred -------c---hHHHHHHHHHhCCCcEEEEEeCCCCccCCCcc--cHHHHHHHHHHHHHHH
Q 005240 646 -------F---QAERFFDALKGHGALSRLVLLPFEHHVYAARE--NVMHVIWETDRWLQKY 694 (706)
Q Consensus 646 -------~---~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~f~~~~ 694 (706)
. ..+++.+.+ ..+++++|+++|.+.... ...+..+.+.+||++.
T Consensus 132 ~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 187 (191)
T 3bdv_A 132 ASHNDPLMSFTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEIL 187 (191)
T ss_dssp ECSSBTTBCHHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTT
T ss_pred ecCCCCcCCHHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHh
Confidence 0 122444444 468999999999875421 3345558888888764
No 346
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=98.81 E-value=2.4e-08 Score=98.84 Aligned_cols=100 Identities=17% Similarity=0.069 Sum_probs=65.9
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAV 590 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~ 590 (706)
.|+||++||.+.. ...+ ..++..|+ .+|.|+..+.+ |+|.+... ........+|+.+++
T Consensus 20 ~~~vv~~HG~~~~-----------~~~~----~~~~~~l~-~~~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~l 80 (267)
T 3fla_A 20 RARLVCLPHAGGS-----------ASFF----FPLAKALA-PAVEVLAVQYP---GRQDRRHEPPVDSIGGLTNRLLEVL 80 (267)
T ss_dssp SEEEEEECCTTCC-----------GGGG----HHHHHHHT-TTEEEEEECCT---TSGGGTTSCCCCSHHHHHHHHHHHT
T ss_pred CceEEEeCCCCCC-----------chhH----HHHHHHhc-cCcEEEEecCC---CCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 5889999996421 1111 12334444 45999986665 44443221 223455555665555
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCc----eeEEEeccCCC
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL----FCCGIARSGSY 637 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~----~~a~v~~~~~~ 637 (706)
+.+ +..++.++|||+||++++.++.+.|++ +++++..++..
T Consensus 81 ~~~------~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~ 125 (267)
T 3fla_A 81 RPF------GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRA 125 (267)
T ss_dssp GGG------TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCC
T ss_pred Hhc------CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCc
Confidence 543 447899999999999999999999986 88888887653
No 347
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.80 E-value=1.6e-05 Score=82.64 Aligned_cols=192 Identities=8% Similarity=-0.071 Sum_probs=93.7
Q ss_pred ceEEEEccC-C--Ccee--cCC--------C-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeE
Q 005240 157 AQLVLGSLD-G--TAKD--FGT--------P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR 222 (706)
Q Consensus 157 ~~l~~~~l~-g--~~~~--lt~--------~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 222 (706)
..|+++|+. . +++. .-+ + .....+..+||| |+++...... ......+.++|.++.++.
T Consensus 106 ~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~------g~~~g~v~vlD~~T~~v~ 177 (462)
T 2ece_A 106 SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEE------GEGPGGILMLDHYSFEPL 177 (462)
T ss_dssp CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETT------SCSCCEEEEECTTTCCEE
T ss_pred CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcC------CCCCCeEEEEECCCCeEE
Confidence 679999983 2 2222 111 1 244567889999 6555544321 112468999999866544
Q ss_pred -EcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEecc-------CCCCcc-ccCccceeeeecCCCCCCCCceE
Q 005240 223 -ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQD-------RGDANV-EVSPRDIIYTQPAEPAEGEKPEI 293 (706)
Q Consensus 223 -~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~-------~~~~~~-~~~~~~~l~~~d~~~~~~~~~~~ 293 (706)
++......... .+.+.|+|+++. +++++.. +..... .....+.|.++|. ++++..+
T Consensus 178 ~~~~~~~~~~~~----------~Yd~~~~p~~~~--mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~---~~~k~~~ 242 (462)
T 2ece_A 178 GKWEIDRGDQYL----------AYDFWWNLPNEV--LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL---RKRKRIH 242 (462)
T ss_dssp EECCSBCTTCCC----------CCCEEEETTTTE--EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET---TTTEEEE
T ss_pred EEEccCCCCccc----------cceEEECCCCCE--EEEccCcCccccccccchhhhhhccCCEEEEEEC---CCCcEee
Confidence 44323222111 236789999994 3444311 100000 0023457999998 4443332
Q ss_pred Eeecc---ccccc--ceecCCCceEEEEee--ccccceEEEEEcCCCCCCCceeeecCc---ccccc---------cCCC
Q 005240 294 LHKLD---LRFRS--VSWCDDSLALVNETW--YKTSQTRTWLVCPGSKDVAPRVLFDRV---FENVY---------SDPG 354 (706)
Q Consensus 294 l~~~~---~~~~~--~~wspDg~~l~~~~~--~~~~~~~l~~~d~~~~~~~~~~l~~~~---~~~~~---------~~~~ 354 (706)
-.... ..... +.|+|||++++.... ...-...|+.+..+.+..+..+..+-. +.... ..+.
T Consensus 243 tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 243 SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc
Confidence 22221 11222 346999998877643 011122344333233221222221110 10000 0122
Q ss_pred CCceEeccCCCEEEEee
Q 005240 355 SPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 355 ~~~~~~s~dg~~l~~~~ 371 (706)
...+..|+||++||++.
T Consensus 323 pa~I~lS~DGrfLYVSn 339 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSL 339 (462)
T ss_dssp CCCEEECTTSCEEEEEE
T ss_pred eeEEEECCCCCEEEEEe
Confidence 34577899999999876
No 348
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.79 E-value=4.8e-07 Score=92.76 Aligned_cols=83 Identities=14% Similarity=0.117 Sum_probs=50.6
Q ss_pred ceeEeecCCCCCCCCeeeeecCC-CCCcccceeeCC--CCCeEEEEeeccccccccCCceeEEEEEcCCCc---------
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYP-DGAKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGE--------- 73 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~SP--DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~--------- 73 (706)
.|.|+++.. .....+.+..+. ....+..+.|+| ||+.|+.... + ..|.++|+.+++
T Consensus 34 ~i~iw~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~--------d--g~v~vwd~~~~~~~~~~~~~~ 101 (351)
T 3f3f_A 34 HIKVFKLDK--DTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY--------D--KTVKLWEEDPDQEECSGRRWN 101 (351)
T ss_dssp EEEEEEECS--SSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET--------T--SCEEEEEECTTSCTTSSCSEE
T ss_pred eEEEEECCC--CCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC--------C--CeEEEEecCCCcccccccCcc
Confidence 588899876 112223332222 233588999999 6999987653 3 456666666653
Q ss_pred -eeecccCCCccccccccceEEecC--CcEEEEEe
Q 005240 74 -AKPLFESPDICLNAVFGSFVWVNN--STLLIFTI 105 (706)
Q Consensus 74 -~~~lt~~~~~~~~~~~~~~~wSpD--g~~l~~~~ 105 (706)
...+..... .+..+.|+|+ ++.|+...
T Consensus 102 ~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~ 131 (351)
T 3f3f_A 102 KLCTLNDSKG-----SLYSVKFAPAHLGLKLACLG 131 (351)
T ss_dssp EEEEECCCSS-----CEEEEEECCGGGCSEEEEEE
T ss_pred eeeeecccCC-----ceeEEEEcCCCCCcEEEEec
Confidence 222222222 2778999999 99888764
No 349
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.78 E-value=1.4e-06 Score=90.00 Aligned_cols=132 Identities=6% Similarity=-0.012 Sum_probs=79.1
Q ss_pred ceEEEEcc-CCCceecCC-C--ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee--EEccc-CCC
Q 005240 157 AQLVLGSL-DGTAKDFGT-P--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV--RELCD-LPP 229 (706)
Q Consensus 157 ~~l~~~~l-~g~~~~lt~-~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~~-~~~ 229 (706)
+.|.++|+ +++...+.. . ..+..++|+|||+.|+..+.+ ..|.+||+.+++. ..+.. +.
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-------------g~i~iwd~~~~~~~~~~~~~~h~- 214 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-------------GILDVYNLSSPDQASSRFPVDEE- 214 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-------------SCEEEEESSCTTSCCEECCCCTT-
T ss_pred CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-------------CEEEEEECCCCCCCccEEeccCC-
Confidence 56777888 455443322 2 457899999999998765543 3799999986543 23322 11
Q ss_pred CCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEee---cccccc--c
Q 005240 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHK---LDLRFR--S 303 (706)
Q Consensus 230 ~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~---~~~~~~--~ 303 (706)
..+..+.|+|||.. |+... ++ .|.+||+ ..++. ..+.. ....+. .
T Consensus 215 ------------~~v~~l~fs~~g~~-l~s~~--~~-----------~v~iwd~---~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T 3lrv_A 215 ------------AKIKEVKFADNGYW-MVVEC--DQ-----------TVVCFDL---RKDVGTLAYPTYTIPEFKTGTVT 265 (343)
T ss_dssp ------------SCEEEEEECTTSSE-EEEEE--SS-----------BEEEEET---TSSTTCBSSCCCBC-----CCEE
T ss_pred ------------CCEEEEEEeCCCCE-EEEEe--CC-----------eEEEEEc---CCCCcceeecccccccccccceE
Confidence 22458899999986 55332 11 3788888 33332 22222 122233 4
Q ss_pred ceecCCCceEEEEeeccccceEEEEEcCC
Q 005240 304 VSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (706)
Q Consensus 304 ~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (706)
+.|+|+|+.|+..+.. ++..+||.++..
T Consensus 266 ~~~~~~g~~l~~~s~~-d~~i~v~~~~~~ 293 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNE-SNSLTIYKFDKK 293 (343)
T ss_dssp EEECTTSSEEEEEETT-TTEEEEEEECTT
T ss_pred EEECCCCCEEEEecCC-CCcEEEEEEccc
Confidence 8999999999876531 244566666543
No 350
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.77 E-value=3.5e-07 Score=105.29 Aligned_cols=222 Identities=10% Similarity=0.096 Sum_probs=123.3
Q ss_pred ceEEEEccC-C--C-ceecCCC-ceEeeeeeCCC--CcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCC
Q 005240 157 AQLVLGSLD-G--T-AKDFGTP-AVYTAVEPSPD--QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP 229 (706)
Q Consensus 157 ~~l~~~~l~-g--~-~~~lt~~-~~~~~~~~SpD--G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 229 (706)
+.|.++++. + + ...+... ..+..++|+|+ |+.|+..+.+ ..|.+|++.++....+.....
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-------------g~I~vwd~~~~~~~~~~~~~~ 97 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------------GKVLIWKEENGRWSQIAVHAV 97 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-------------SCEEEEEEETTEEEEEEEECC
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-------------CeEEEEECCCCcccccccccC
Confidence 466677773 2 2 2233333 67899999998 8888766654 379999998775333322221
Q ss_pred CCCCCcccCccCCCCcceeeecC--CCceEEEEEeccCCCCccccCccceeeeecCCCCCCC---CceEEeecccccccc
Q 005240 230 AEDIPVCYNSVREGMRSISWRAD--KPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGE---KPEILHKLDLRFRSV 304 (706)
Q Consensus 230 ~~~~p~~~~~~~~g~~~~~~spd--g~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~~~~l~~~~~~~~~~ 304 (706)
.. ..+..+.|+|+ ++. |+... . .+.|.++|+ ..+ ....+......+..+
T Consensus 98 h~----------~~V~~v~~sp~~~~~~-l~sgs-~-----------dg~I~vwdl---~~~~~~~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 98 HS----------ASVNSVQWAPHEYGPL-LLVAS-S-----------DGKVSVVEF---KENGTTSPIIIDAHAIGVNSA 151 (753)
T ss_dssp CS----------SCEEEEEECCGGGCSE-EEEEE-T-----------TSEEEEEEC---CSSSCCCCEEEECCSSCEEEE
T ss_pred CC----------CCeEEEEECCCCCCCE-EEEEe-C-----------CCcEEEEEe---ecCCCcceeEeecCCCceEEE
Confidence 11 22457899999 664 44331 1 124788888 333 233345567788899
Q ss_pred eecC-------------CCceEEEEeeccccceEEEEEcCCCCCCCceee--ecCcccccccCCCCCceEeccC---CCE
Q 005240 305 SWCD-------------DSLALVNETWYKTSQTRTWLVCPGSKDVAPRVL--FDRVFENVYSDPGSPMMTRTST---GTN 366 (706)
Q Consensus 305 ~wsp-------------Dg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~s~d---g~~ 366 (706)
.|+| |+..|+..+. ++..++| |+.++......+ ...... ....+.|+|+ |++
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~~l~sgs~--dg~I~iw--d~~~~~~~~~~~~~~~~h~~------~V~~l~~sp~~~~~~~ 221 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESRKFVTGGA--DNLVKIW--KYNSDAQTYVLESTLEGHSD------WVRDVAWSPTVLLRSY 221 (753)
T ss_dssp EECCCC---------CGGGCCEEEEET--TSCEEEE--EEETTTTEEEEEEEECCCSS------CEEEEEECCCCSSSEE
T ss_pred EecCcccccccccccCCCCCEEEEEEC--CCeEEEE--eccCCcccceeeeeecCCCC------cEEEEEeccCCCCCCE
Confidence 9999 5787877652 2344454 444421111111 111111 1234778999 777
Q ss_pred EEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCcee---eeecccchhhhhhhhhhccCCCceecccCCCEEEE
Q 005240 367 VIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKE---RIWESNREKYFETAVALVFGQGEEDINLNQLKILT 443 (706)
Q Consensus 367 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~ 443 (706)
++..... + .+..+|+.+++.. .+.... ..........|+|||+.++.
T Consensus 222 l~s~s~D----g-----------------~I~iwd~~~~~~~~~~~~~~~~---------~~~~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 222 LASVSQD----R-----------------TCIIWTQDNEQGPWKKTLLKEE---------KFPDVLWRASWSLSGNVLAL 271 (753)
T ss_dssp EEEEESS----S-----------------CEEEEEESSSSSCCBCCBSSSS---------CCSSCCCCEEECTTTCCEEE
T ss_pred EEEEecC----C-----------------EEEEecCCCCCCcceeEEeccC---------CCCCceEEEEEcCCCCEEEE
Confidence 6665421 1 2444555444211 111110 01122335789999987776
Q ss_pred EEecCCCCcEEEEEECCC
Q 005240 444 SKESKTEITQYHILSWPL 461 (706)
Q Consensus 444 ~~~~~~~p~~v~~~~~~~ 461 (706)
...+. .|++|++.+
T Consensus 272 ~s~Dg----~I~vwd~~~ 285 (753)
T 3jro_A 272 SGGDN----KVTLWKENL 285 (753)
T ss_dssp ECSSS----CEECCBCCS
T ss_pred EcCCC----EEEEEecCC
Confidence 54433 488888874
No 351
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=98.77 E-value=6.9e-08 Score=97.03 Aligned_cols=119 Identities=19% Similarity=0.129 Sum_probs=81.9
Q ss_pred EEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCC-CcCCCCchHHHHHHHCCeEEEEcC
Q 005240 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPN-EFSGMTPTSSLIFLARRFAVLAGP 562 (706)
Q Consensus 484 ~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~G~~v~~~~ 562 (706)
+..+...+|..++...+-|++ -|.||++||.+.. .. .| ...+..| +.||.|+..+
T Consensus 4 ~~~~~~~~g~~l~~~~~G~~~--------~~~vvllHG~~~~-----------~~~~w----~~~~~~L-~~~~~vi~~D 59 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGPVE--------GPALFVLHGGPGG-----------NAYVL----REGLQDY-LEGFRVVYFD 59 (286)
T ss_dssp EEEEEECSSCEEEEEEESCTT--------SCEEEEECCTTTC-----------CSHHH----HHHHGGG-CTTSEEEEEC
T ss_pred ceeEEeECCEEEEEEeecCCC--------CCEEEEECCCCCc-----------chhHH----HHHHHHh-cCCCEEEEEC
Confidence 334455688888877775532 2568889996421 11 11 1123334 5699999965
Q ss_pred CCCcCCCCCCCC-c----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 563 SIPIIGEGDKLP-N----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 563 ~~~~~g~g~~~~-~----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
-+ |+|.+.. . ....+...+|+.+.++.+ ..+++.++||||||.+++.++.++|+ ++++|..++.
T Consensus 60 l~---G~G~S~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~ 128 (286)
T 2yys_A 60 QR---GSGRSLELPQDPRLFTVDALVEDTLLLAEAL------GVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPW 128 (286)
T ss_dssp CT---TSTTSCCCCSCGGGCCHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCC
T ss_pred CC---CCCCCCCCccCcccCcHHHHHHHHHHHHHHh------CCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCc
Confidence 54 5565543 2 224566778887777765 23689999999999999999999999 9999998875
No 352
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=98.77 E-value=7.9e-08 Score=95.63 Aligned_cols=116 Identities=12% Similarity=0.130 Sum_probs=78.8
Q ss_pred EEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCc
Q 005240 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (706)
Q Consensus 487 ~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (706)
+++.||..+....+- . -|.||++||.+.. ...+ ...+..|++.||.|++.+.+
T Consensus 3 ~~~~~g~~l~y~~~g-------~---~~~vvllHG~~~~-----------~~~~----~~~~~~L~~~g~~vi~~D~~-- 55 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG-------S---GQPIVFSHGWPLN-----------ADSW----ESQMIFLAAQGYRVIAHDRR-- 55 (273)
T ss_dssp EECTTSCEEEEEEES-------C---SSEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT--
T ss_pred EecCCCcEEEEEEcC-------C---CCEEEEECCCCCc-----------HHHH----hhHHhhHhhCCcEEEEECCC--
Confidence 456688877655441 1 2568889996421 1111 13456788899999996665
Q ss_pred CCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC-CCceeEEEeccCC
Q 005240 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGS 636 (706)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~ 636 (706)
|+|.+... ....+...+|+.++++++ +.+++.++||||||.+++.++.++ |++++++|..++.
T Consensus 56 -G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (273)
T 1a8s_A 56 -GHGRSSQPWSGNDMDTYADDLAQLIEHL------DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAV 121 (273)
T ss_dssp -TSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEccc
Confidence 45555332 223556677777777654 346899999999999998877665 8999999988753
No 353
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=98.76 E-value=5.2e-08 Score=97.01 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=66.6
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc----h--hhHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN----D--RFVEQLVSSAE 587 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~----~--~~~~~~~~D~~ 587 (706)
|.||++||.+.. ...|. .....|+ .+|.|+..+.+ |+|.+... . ...+...+|+.
T Consensus 21 ~~vvllHG~~~~-----------~~~w~----~~~~~L~-~~~~vi~~Dl~---G~G~S~~~~~~~~~~~~~~~~a~dl~ 81 (271)
T 1wom_A 21 ASIMFAPGFGCD-----------QSVWN----AVAPAFE-EDHRVILFDYV---GSGHSDLRAYDLNRYQTLDGYAQDVL 81 (271)
T ss_dssp SEEEEECCTTCC-----------GGGGT----TTGGGGT-TTSEEEECCCS---CCSSSCCTTCCTTGGGSHHHHHHHHH
T ss_pred CcEEEEcCCCCc-----------hhhHH----HHHHHHH-hcCeEEEECCC---CCCCCCCCcccccccccHHHHHHHHH
Confidence 678889995321 11121 1223344 47999996554 55554321 1 23556677777
Q ss_pred HHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 588 AAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 588 ~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
+.++.+ +.+++.++||||||.+++.++.++|++++++|..++.
T Consensus 82 ~~l~~l------~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~ 124 (271)
T 1wom_A 82 DVCEAL------DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPS 124 (271)
T ss_dssp HHHHHT------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHc------CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCC
Confidence 766644 3468999999999999999999999999999988764
No 354
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=98.76 E-value=4.8e-09 Score=102.73 Aligned_cols=112 Identities=13% Similarity=0.050 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCC------CceeEEEeccCCCCC-----------------
Q 005240 583 VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP------HLFCCGIARSGSYNK----------------- 639 (706)
Q Consensus 583 ~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p------~~~~a~v~~~~~~d~----------------- 639 (706)
..|+.+++++|.+....+..+++|+|+||||.+|+.++.+.+ ..+++++..++....
T Consensus 83 ~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~ 162 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPEHPGELRITEKFR 162 (243)
T ss_dssp GCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECTTSTTCEEECGGGT
T ss_pred hhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcccccccccccchhHH
Confidence 345556666666542234568999999999999999998742 257777777664311
Q ss_pred --------CCCCcc-----------c-hHHHHHHHHHhCC---CcEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHHhc
Q 005240 640 --------TLTPFG-----------F-QAERFFDALKGHG---ALSRLVLLPFEHHVYAARENVMHVIWETDRWLQKYCL 696 (706)
Q Consensus 640 --------~~~~~~-----------~-~~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~l~ 696 (706)
...|.. . ..+++++.+...+ .....+++++++|.+... ....+.+.+||+++++
T Consensus 163 ~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~---~~~~~~i~~fl~~~~~ 239 (243)
T 1ycd_A 163 DSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK---KDIIRPIVEQITSSLQ 239 (243)
T ss_dssp TTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC---HHHHHHHHHHHHHHHC
T ss_pred HhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch---HHHHHHHHHHHHHhhh
Confidence 001110 0 2236777776641 112445666789987642 3588999999999875
Q ss_pred c
Q 005240 697 S 697 (706)
Q Consensus 697 ~ 697 (706)
.
T Consensus 240 ~ 240 (243)
T 1ycd_A 240 E 240 (243)
T ss_dssp -
T ss_pred h
Confidence 4
No 355
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=98.75 E-value=7.1e-08 Score=100.99 Aligned_cols=80 Identities=16% Similarity=0.241 Sum_probs=55.6
Q ss_pred HHHCCeEEEEcCCCCc-CCC-CCCC---------Cc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEE-EEEechHHHH
Q 005240 551 FLARRFAVLAGPSIPI-IGE-GDKL---------PN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIA-VGGHSYGAFM 615 (706)
Q Consensus 551 l~~~G~~v~~~~~~~~-~g~-g~~~---------~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~-i~G~S~GG~~ 615 (706)
|++.||.|++.+.+|. .+. +... .. ........+|+.++++.+ +..++. ++||||||.+
T Consensus 94 L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~~lvGhS~Gg~i 167 (377)
T 2b61_A 94 LDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQDIVKVQKALLEHL------GISHLKAIIGGSFGGMQ 167 (377)
T ss_dssp EETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHHHHHHHHHHHHHT------TCCCEEEEEEETHHHHH
T ss_pred cccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHHHHHHHHHHHHHc------CCcceeEEEEEChhHHH
Confidence 5579999999777762 111 1100 00 113445556665555433 346887 9999999999
Q ss_pred HHHHHHhCCCceeEEEeccCC
Q 005240 616 TAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 616 a~~~~~~~p~~~~a~v~~~~~ 636 (706)
++.++.++|++++++|+.++.
T Consensus 168 a~~~a~~~p~~v~~lvl~~~~ 188 (377)
T 2b61_A 168 ANQWAIDYPDFMDNIVNLCSS 188 (377)
T ss_dssp HHHHHHHSTTSEEEEEEESCC
T ss_pred HHHHHHHCchhhheeEEeccC
Confidence 999999999999999999874
No 356
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=98.75 E-value=1e-07 Score=97.80 Aligned_cols=115 Identities=17% Similarity=0.174 Sum_probs=80.8
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..++....- . -|.||++||.+.. ...| ...+..|++.||.|++++-+ |+
T Consensus 18 ~~g~~l~y~~~G-------~---g~~vvllHG~~~~-----------~~~w----~~~~~~L~~~g~~via~Dl~---G~ 69 (328)
T 2cjp_A 18 VNGLNMHLAELG-------E---GPTILFIHGFPEL-----------WYSW----RHQMVYLAERGYRAVAPDLR---GY 69 (328)
T ss_dssp ETTEEEEEEEEC-------S---SSEEEEECCTTCC-----------GGGG----HHHHHHHHTTTCEEEEECCT---TS
T ss_pred CCCcEEEEEEcC-------C---CCEEEEECCCCCc-----------hHHH----HHHHHHHHHCCcEEEEECCC---CC
Confidence 478787766541 1 2578899996421 1111 12345677789999996655 56
Q ss_pred CCCCCc------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 570 GDKLPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 570 g~~~~~------~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
|.+... .......++|+.+.++.+.. +.+++.++||||||.+++.++.++|++++++|..++.
T Consensus 70 G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 70 GDTTGAPLNDPSKFSILHLVGDVVALLEAIAP----NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp TTCBCCCTTCGGGGSHHHHHHHHHHHHHHHCT----TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCCcCcCCcccccHHHHHHHHHHHHHHhcC----CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 665432 12356778888888877621 2468999999999999999999999999999998754
No 357
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=98.75 E-value=7e-08 Score=95.08 Aligned_cols=96 Identities=10% Similarity=-0.006 Sum_probs=65.6
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc-hhhHHHHHHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN-DRFVEQLVSSAEAAVEE 592 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~-~~~~~~~~~D~~~~~~~ 592 (706)
|.||++||.+.. ...| ......|++. |.|+..+.+ |+|.+... ........+|+.+.++.
T Consensus 17 ~~vvllHG~~~~-----------~~~w----~~~~~~L~~~-~~via~Dl~---G~G~S~~~~~~~~~~~a~dl~~~l~~ 77 (255)
T 3bf7_A 17 SPIVLVHGLFGS-----------LDNL----GVLARDLVND-HNIIQVDVR---NHGLSPREPVMNYPAMAQDLVDTLDA 77 (255)
T ss_dssp CCEEEECCTTCC-----------TTTT----HHHHHHHTTT-SCEEEECCT---TSTTSCCCSCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCccc-----------HhHH----HHHHHHHHhh-CcEEEecCC---CCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 568889996421 1111 1234455544 989886555 45555332 12345667777777776
Q ss_pred HHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEecc
Q 005240 593 VVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 634 (706)
Q Consensus 593 l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~ 634 (706)
+ +.+++.++||||||.+++.++.++|++++++|...
T Consensus 78 l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 113 (255)
T 3bf7_A 78 L------QIDKATFIGHSMGGKAVMALTALAPDRIDKLVAID 113 (255)
T ss_dssp H------TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred c------CCCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEc
Confidence 5 23689999999999999999999999999998864
No 358
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.74 E-value=3.9e-06 Score=86.00 Aligned_cols=224 Identities=9% Similarity=-0.033 Sum_probs=128.9
Q ss_pred ccceeEeecCCCCCCCCeeeee-----cCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCce-eec
Q 005240 4 FTGIGIHRLLPDDSLGPEKEVH-----GYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPL 77 (706)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~i~-----~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~l 77 (706)
..+|.+.|.++ ++..+-. ..+-+.....+.+ ++++|+.+. .....|.++|+++++. ..+
T Consensus 16 ~~~l~~~d~~t----~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~---------~~~~~v~viD~~t~~~~~~i 80 (328)
T 3dsm_A 16 NATLSYYDPAT----CEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVV---------NNSHVIFAIDINTFKEVGRI 80 (328)
T ss_dssp CBEEEEEETTT----TEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEE---------GGGTEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCC----CEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEE---------cCCCEEEEEECcccEEEEEc
Confidence 45788888766 6544311 0011212333444 677775543 3346899999998876 445
Q ss_pred ccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccc
Q 005240 78 FESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (706)
Q Consensus 78 t~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 157 (706)
.... .+..+++++|| .|++.... ..
T Consensus 81 ~~~~------~p~~i~~~~~g-~lyv~~~~------------------------------------------------~~ 105 (328)
T 3dsm_A 81 TGFT------SPRYIHFLSDE-KAYVTQIW------------------------------------------------DY 105 (328)
T ss_dssp ECCS------SEEEEEEEETT-EEEEEEBS------------------------------------------------CS
T ss_pred CCCC------CCcEEEEeCCC-eEEEEECC------------------------------------------------CC
Confidence 3221 25678899999 56654210 15
Q ss_pred eEEEEcc-CCCce-ecCCCc------eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCC
Q 005240 158 QLVLGSL-DGTAK-DFGTPA------VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPP 229 (706)
Q Consensus 158 ~l~~~~l-~g~~~-~lt~~~------~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 229 (706)
.|+++|+ +++.. .+..+. ....+++ ++++|++..... ...|.++|+.++++.......
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~-----------~~~v~viD~~t~~~~~~i~~g- 171 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSY-----------QNRILKIDTETDKVVDELTIG- 171 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTT-----------CCEEEEEETTTTEEEEEEECS-
T ss_pred eEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCC-----------CCEEEEEECCCCeEEEEEEcC-
Confidence 7888888 44433 333222 4556666 677887664311 247999999876654322211
Q ss_pred CCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec--ccccccceec
Q 005240 230 AEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWC 307 (706)
Q Consensus 230 ~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~--~~~~~~~~ws 307 (706)
..+..+.++|||+ +++....+..... .......|+++|. +++++...... ......++|+
T Consensus 172 ------------~~p~~i~~~~dG~--l~v~~~~~~~~~~-~~~~~~~v~~id~---~t~~v~~~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 172 ------------IQPTSLVMDKYNK--MWTITDGGYEGSP-YGYEAPSLYRIDA---ETFTVEKQFKFKLGDWPSEVQLN 233 (328)
T ss_dssp ------------SCBCCCEECTTSE--EEEEBCCBCTTCS-SCBCCCEEEEEET---TTTEEEEEEECCTTCCCEEEEEC
T ss_pred ------------CCccceEEcCCCC--EEEEECCCccCCc-cccCCceEEEEEC---CCCeEEEEEecCCCCCceeEEEe
Confidence 1133678899987 6555322111000 0001246899998 56655432222 2356788999
Q ss_pred CCCceEEEEeeccccceEEEEEcCCCCC
Q 005240 308 DDSLALVNETWYKTSQTRTWLVCPGSKD 335 (706)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~ 335 (706)
||++.|++.. . .|+++|+++++
T Consensus 234 ~d~~~lyv~~-~-----~v~~~d~~t~~ 255 (328)
T 3dsm_A 234 GTRDTLYWIN-N-----DIWRMPVEADR 255 (328)
T ss_dssp TTSCEEEEES-S-----SEEEEETTCSS
T ss_pred cCCCEEEEEc-c-----EEEEEECCCCc
Confidence 9999888753 1 69999998853
No 359
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=98.74 E-value=7.3e-08 Score=96.98 Aligned_cols=118 Identities=17% Similarity=0.123 Sum_probs=79.2
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..+....+-+. + + .|.||++||++.. ...+ +.....+++.||.|+..+.+ |+
T Consensus 12 ~~g~~l~~~~~g~~---~-~---~~~vvllHG~~~~-----------~~~~----~~~~~~l~~~g~~vi~~D~~---G~ 66 (293)
T 1mtz_A 12 VNGIYIYYKLCKAP---E-E---KAKLMTMHGGPGM-----------SHDY----LLSLRDMTKEGITVLFYDQF---GC 66 (293)
T ss_dssp ETTEEEEEEEECCS---S-C---SEEEEEECCTTTC-----------CSGG----GGGGGGGGGGTEEEEEECCT---TS
T ss_pred ECCEEEEEEEECCC---C-C---CCeEEEEeCCCCc-----------chhH----HHHHHHHHhcCcEEEEecCC---CC
Confidence 36777776655331 1 1 2568889996421 0111 11123346789999996665 55
Q ss_pred CCCCCch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 570 GDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 570 g~~~~~~---~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
|.+.... ...+...+|+.+.++.+. +.+++.++||||||.+++.++.++|++++++|+.++..
T Consensus 67 G~S~~~~~~~~~~~~~~~dl~~~~~~l~-----~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 132 (293)
T 1mtz_A 67 GRSEEPDQSKFTIDYGVEEAEALRSKLF-----GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLS 132 (293)
T ss_dssp TTSCCCCGGGCSHHHHHHHHHHHHHHHH-----TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCS
T ss_pred ccCCCCCCCcccHHHHHHHHHHHHHHhc-----CCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCcc
Confidence 6554322 234566778777777662 12589999999999999999999999999999998764
No 360
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.73 E-value=4.1e-06 Score=82.92 Aligned_cols=224 Identities=11% Similarity=0.081 Sum_probs=132.0
Q ss_pred ceEEEEccCC-Ccee------cCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCC
Q 005240 157 AQLVLGSLDG-TAKD------FGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP 228 (706)
Q Consensus 157 ~~l~~~~l~g-~~~~------lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 228 (706)
..|++++++| ..+. +... .....++|+|+++.|+++... ...|++++++++..+.+....
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~------------~~~I~~~~~~g~~~~~~~~~~ 77 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS------------EPSIGRASLHGGEPTTIIRQD 77 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT------------TTEEEEEESSSCCCEEEECTT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC------------CCEEEEEecCCCCcEEEEECC
Confidence 5789999977 3321 1111 356789999999999887654 248999999987655543221
Q ss_pred CCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecc-cccccceec
Q 005240 229 PAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-LRFRSVSWC 307 (706)
Q Consensus 229 ~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~ws 307 (706)
. ..+..+++.|++.. ||+... . ...|++++. ++...+.+.... .....++++
T Consensus 78 ~------------~~p~~ia~d~~~~~-lyv~d~-~----------~~~I~~~~~---~g~~~~~~~~~~~~~P~~i~vd 130 (267)
T 1npe_A 78 L------------GSPEGIALDHLGRT-IFWTDS-Q----------LDRIEVAKM---DGTQRRVLFDTGLVNPRGIVTD 130 (267)
T ss_dssp C------------CCEEEEEEETTTTE-EEEEET-T----------TTEEEEEET---TSCSCEEEECSSCSSEEEEEEE
T ss_pred C------------CCccEEEEEecCCe-EEEEEC-C----------CCEEEEEEc---CCCCEEEEEECCCCCccEEEEe
Confidence 1 12447789998776 776632 1 125778887 555445554322 345677899
Q ss_pred CCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCC
Q 005240 308 DDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRG 387 (706)
Q Consensus 308 pDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g 387 (706)
|++..|+++.... ....|+++++++. ..+.+...... .| ..+++++++++|++....
T Consensus 131 ~~~g~lyv~~~~~-~~~~I~~~~~dg~--~~~~~~~~~~~----~P--~gia~d~~~~~lyv~d~~-------------- 187 (267)
T 1npe_A 131 PVRGNLYWTDWNR-DNPKIETSHMDGT--NRRILAQDNLG----LP--NGLTFDAFSSQLCWVDAG-------------- 187 (267)
T ss_dssp TTTTEEEEEECCS-SSCEEEEEETTSC--CCEEEECTTCS----CE--EEEEEETTTTEEEEEETT--------------
T ss_pred eCCCEEEEEECCC-CCcEEEEEecCCC--CcEEEEECCCC----CC--cEEEEcCCCCEEEEEECC--------------
Confidence 9887787764221 2457999998873 23333222111 11 136678998888887521
Q ss_pred CCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCCCcee
Q 005240 388 FTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPLKKSS 465 (706)
Q Consensus 388 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~ 465 (706)
...|+.++++++..+.+.... .....+..|+..|+++... ...|+++|..+++..
T Consensus 188 ------~~~I~~~~~~g~~~~~~~~~~--------------~~P~gi~~d~~~lyva~~~---~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 188 ------THRAECLNPAQPGRRKVLEGL--------------QYPFAVTSYGKNLYYTDWK---TNSVIAMDLAISKEM 242 (267)
T ss_dssp ------TTEEEEEETTEEEEEEEEECC--------------CSEEEEEEETTEEEEEETT---TTEEEEEETTTTEEE
T ss_pred ------CCEEEEEecCCCceEEEecCC--------------CCceEEEEeCCEEEEEECC---CCeEEEEeCCCCCce
Confidence 224777887654433332211 0112344566666654322 246888887776543
No 361
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=98.73 E-value=9.6e-08 Score=95.75 Aligned_cols=121 Identities=20% Similarity=0.177 Sum_probs=83.3
Q ss_pred eEEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEc
Q 005240 482 KEMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAG 561 (706)
Q Consensus 482 ~~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~ 561 (706)
.+...+...+|..++...+-+++ . -|.||++||.+.. ...| ...+..|++ ||.|+.+
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~---~----~~~vvllHG~~~~-----------~~~~----~~~~~~L~~-~~~vi~~ 61 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDI---S----RPPVLCLPGLTRN-----------ARDF----EDLATRLAG-DWRVLCP 61 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCT---T----SCCEEEECCTTCC-----------GGGG----HHHHHHHBB-TBCEEEE
T ss_pred cccCeeecCCCceEEEEEcCCCC---C----CCcEEEECCCCcc-----------hhhH----HHHHHHhhc-CCEEEee
Confidence 35566777799999988875542 1 2568889996421 1111 123444544 9999986
Q ss_pred CCCCcCCCCCCCCc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEecc
Q 005240 562 PSIPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARS 634 (706)
Q Consensus 562 ~~~~~~g~g~~~~~----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~ 634 (706)
+.+ |+|.+... ....+...+|+.+.++.+ ..+++.++||||||.+++.++.++|++++++|...
T Consensus 62 Dl~---G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 129 (285)
T 3bwx_A 62 EMR---GRGDSDYAKDPMTYQPMQYLQDLEALLAQE------GIERFVAIGTSLGGLLTMLLAAANPARIAAAVLND 129 (285)
T ss_dssp CCT---TBTTSCCCSSGGGCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred cCC---CCCCCCCCCCccccCHHHHHHHHHHHHHhc------CCCceEEEEeCHHHHHHHHHHHhCchheeEEEEec
Confidence 655 55655432 123456677888877765 23689999999999999999999999999998853
No 362
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=98.72 E-value=1.6e-07 Score=94.23 Aligned_cols=113 Identities=8% Similarity=-0.109 Sum_probs=76.4
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..+....+-+ -|+||++||.+.. ...+. ..+..|+ .+|.|+..+.+ |+
T Consensus 15 ~~g~~l~~~~~g~----------~~~vv~lHG~~~~-----------~~~~~----~~~~~l~-~~~~vi~~D~~---G~ 65 (297)
T 2qvb_A 15 IAGKRMAYIDEGK----------GDAIVFQHGNPTS-----------SYLWR----NIMPHLE-GLGRLVACDLI---GM 65 (297)
T ss_dssp ETTEEEEEEEESS----------SSEEEEECCTTCC-----------GGGGT----TTGGGGT-TSSEEEEECCT---TS
T ss_pred ECCEEEEEEecCC----------CCeEEEECCCCch-----------HHHHH----HHHHHHh-hcCeEEEEcCC---CC
Confidence 4788887665521 2679999997521 11121 1223343 45888886665 44
Q ss_pred CCCCCch------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 570 GDKLPND------RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 570 g~~~~~~------~~~~~~~~D~~~~~~~l~~~~~id~-~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
|.+.... .......+|+.++++.+ +. .++.++|||+||.+++.++.++|++++++|+.+|..
T Consensus 66 G~S~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 134 (297)
T 2qvb_A 66 GASDKLSPSGPDRYSYGEQRDFLFALWDAL------DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIV 134 (297)
T ss_dssp TTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECC
T ss_pred CCCCCCCCccccCcCHHHHHHHHHHHHHHc------CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEecccc
Confidence 4443321 23556677777766654 34 689999999999999999999999999999998865
No 363
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.72 E-value=5.1e-07 Score=93.34 Aligned_cols=127 Identities=4% Similarity=-0.126 Sum_probs=68.7
Q ss_pred cCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCccc-----ccccCCCCC-ceEeccCCCEEEEeeeccCCcceE
Q 005240 307 CDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFE-----NVYSDPGSP-MMTRTSTGTNVIAKIKKENDEQIY 380 (706)
Q Consensus 307 spDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-----~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~ 380 (706)
++++..+++.+. ..++.+|+.+.. ...+-...+. .....|... .+.++|||+++++..... . +..
T Consensus 219 ~~~~~~~~~vs~-----~~V~viD~~~~~--~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~-~-~~~ 289 (368)
T 1mda_H 219 ANYPGMLVWAVA-----SSILQGDIPAAG--ATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEH-S-RSC 289 (368)
T ss_dssp ETTTTEEEECBS-----SCCEEEECCSSC--CEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEEC-S-SCT
T ss_pred cccCCEEEEEcC-----CEEEEEECCCCc--ceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccc-c-Ccc
Confidence 677777777653 458899987632 2222111110 001112221 256799999888764210 0 000
Q ss_pred EEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECC
Q 005240 381 ILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWP 460 (706)
Q Consensus 381 ~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~ 460 (706)
.+. ...+..+|+++++..+-+..... -+.+.|++||++++++.... ...|.++|++
T Consensus 290 -----~~~-----~~~~~ViD~~t~~vv~~i~vg~~------------p~gi~~s~Dg~~l~va~~~~--~~~VsVID~~ 345 (368)
T 1mda_H 290 -----LAA-----AENTSSVTASVGQTSGPISNGHD------------SDAIIAAQDGASDNYANSAG--TEVLDIYDAA 345 (368)
T ss_dssp -----TSC-----EEEEEEEESSSCCEEECCEEEEE------------ECEEEECCSSSCEEEEEETT--TTEEEEEESS
T ss_pred -----ccc-----CCCEEEEECCCCeEEEEEECCCC------------cceEEECCCCCEEEEEccCC--CCeEEEEECC
Confidence 000 00233789888876554433221 12468999999877765511 2569999998
Q ss_pred CCceeE
Q 005240 461 LKKSSQ 466 (706)
Q Consensus 461 ~~~~~~ 466 (706)
+++...
T Consensus 346 t~kvv~ 351 (368)
T 1mda_H 346 SDQDQS 351 (368)
T ss_dssp SCEEEE
T ss_pred CCcEEE
Confidence 876543
No 364
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=98.71 E-value=1.5e-07 Score=93.68 Aligned_cols=116 Identities=11% Similarity=0.109 Sum_probs=78.3
Q ss_pred EEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCc
Q 005240 487 YQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPI 566 (706)
Q Consensus 487 ~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~ 566 (706)
+++.||..+....+- + -|.||++||.+.. ...+ ...+..|++.||.|++.+.+
T Consensus 3 ~~~~~g~~l~y~~~g-------~---g~~vvllHG~~~~-----------~~~w----~~~~~~l~~~g~~vi~~D~~-- 55 (274)
T 1a8q_A 3 CTTRDGVEIFYKDWG-------Q---GRPVVFIHGWPLN-----------GDAW----QDQLKAVVDAGYRGIAHDRR-- 55 (274)
T ss_dssp EECTTSCEEEEEEEC-------S---SSEEEEECCTTCC-----------GGGG----HHHHHHHHHTTCEEEEECCT--
T ss_pred EEccCCCEEEEEecC-------C---CceEEEECCCcch-----------HHHH----HHHHHHHHhCCCeEEEEcCC--
Confidence 455688777655441 1 2468889996421 0111 13456788899999996655
Q ss_pred CCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC-CCceeEEEeccCC
Q 005240 567 IGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSGS 636 (706)
Q Consensus 567 ~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~~ 636 (706)
|+|.+... ........+|+.+.++.+ +.+++.++||||||.+++.++.++ |++++++|+.++.
T Consensus 56 -G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (274)
T 1a8q_A 56 -GHGHSTPVWDGYDFDTFADDLNDLLTDL------DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAI 121 (274)
T ss_dssp -TSTTSCCCSSCCSHHHHHHHHHHHHHHT------TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred -CCCCCCCCCCCCcHHHHHHHHHHHHHHc------CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCC
Confidence 55555332 223456677777777654 346899999999999998877665 8999999988753
No 365
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.70 E-value=2.8e-06 Score=89.10 Aligned_cols=179 Identities=11% Similarity=0.077 Sum_probs=121.6
Q ss_pred eeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhc
Q 005240 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (706)
Q Consensus 62 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (706)
..|+.+++++++...+...... ...++|.+.+..||+.-.
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~~-----~~gl~~d~~~~~ly~~D~----------------------------------- 135 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLEN-----AIALDFHHRRELVFWSDV----------------------------------- 135 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCSC-----EEEEEEETTTTEEEEEET-----------------------------------
T ss_pred ccceeeccCCCcEEEEecCCCc-----cEEEEEecCCCeEEEEeC-----------------------------------
Confidence 6789999988877666543322 567899988888887621
Q ss_pred cCCchhhhhhhhcccceEEEEccCC-Cceec-CCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC
Q 005240 142 LKDEYDESLFDYYTTAQLVLGSLDG-TAKDF-GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (706)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~l-t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 218 (706)
....|++++++| ..+.+ ..+ .....+++.+.+..|+++.... ..|+++++++
T Consensus 136 -------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~------------~~I~~~~~dg 190 (386)
T 3v65_B 136 -------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT------------SRIEVANLDG 190 (386)
T ss_dssp -------------TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTT------------TEEEECBTTS
T ss_pred -------------CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCC------------CeEEEEeCCC
Confidence 126899999977 44443 223 4556788999889998876542 4799999998
Q ss_pred CeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec-
Q 005240 219 KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL- 297 (706)
Q Consensus 219 ~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~- 297 (706)
+..+.+..... ..+..++..|++.. |||.... . ...|++++. ++...+.+...
T Consensus 191 ~~~~~l~~~~l------------~~P~giavdp~~g~-ly~td~~---~-------~~~I~r~~~---dG~~~~~~~~~~ 244 (386)
T 3v65_B 191 AHRKVLLWQSL------------EKPRAIALHPMEGT-IYWTDWG---N-------TPRIEASSM---DGSGRRIIADTH 244 (386)
T ss_dssp CSCEEEECSSC------------SCEEEEEEETTTTE-EEEEECS---S-------SCEEEEEET---TSCSCEEEECSS
T ss_pred CceEEeecCCC------------CCCcEEEEEcCCCe-EEEeccC---C-------CCEEEEEeC---CCCCcEEEEECC
Confidence 76665543321 12447889988876 8876321 1 135888888 56555555433
Q ss_pred ccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 298 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 298 ~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
-.....++|+|++..|+++.. ...+|+++++++.
T Consensus 245 ~~~PnGlavd~~~~~lY~aD~---~~~~I~~~d~dG~ 278 (386)
T 3v65_B 245 LFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGS 278 (386)
T ss_dssp CSCEEEEEEEGGGTEEEEEET---TTTEEEEECTTSC
T ss_pred CCCeeeEEEeCCCCEEEEEEC---CCCEEEEEeCCCC
Confidence 334567899999888988742 3457999999873
No 366
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=98.70 E-value=1.4e-07 Score=95.91 Aligned_cols=120 Identities=15% Similarity=0.050 Sum_probs=78.1
Q ss_pred EEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCC
Q 005240 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 563 (706)
Q Consensus 484 ~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 563 (706)
...++..+|..++....-+++ -|.||++||++.. +.. ..+...+...||.|+..+.
T Consensus 13 ~~~~~~~~g~~l~y~~~G~~~--------g~pvvllHG~~~~----------~~~------~~~~~~~~~~~~~vi~~D~ 68 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGNPH--------GKPVVMLHGGPGG----------GCN------DKMRRFHDPAKYRIVLFDQ 68 (313)
T ss_dssp EEEEECSSSCEEEEEEEECTT--------SEEEEEECSTTTT----------CCC------GGGGGGSCTTTEEEEEECC
T ss_pred cceEEcCCCCEEEEEecCCCC--------CCeEEEECCCCCc----------ccc------HHHHHhcCcCcceEEEECC
Confidence 344555578888766554321 2457889997421 000 0111223357999999665
Q ss_pred CCcCCCCCCCCc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 564 IPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 564 ~~~~g~g~~~~~----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
+ |+|++... .......++|+.+.++.+ .-+++.++||||||.+++.++.++|++++++|+.++.
T Consensus 69 ~---G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 69 R---GSGRSTPHADLVDNTTWDLVADIERLRTHL------GVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp T---TSTTSBSTTCCTTCCHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred C---CCcCCCCCcccccccHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 5 56665432 123455666766655543 2358999999999999999999999999999987653
No 367
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=98.70 E-value=1.5e-07 Score=95.93 Aligned_cols=119 Identities=18% Similarity=0.111 Sum_probs=77.0
Q ss_pred EEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCC
Q 005240 484 MIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPS 563 (706)
Q Consensus 484 ~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~ 563 (706)
...+...+|..++....-+++ -|.||++||++... .+ ..+...+...||.|+..+.
T Consensus 16 ~~~~~~~~g~~l~~~~~g~~~--------g~~vvllHG~~~~~---------~~-------~~~~~~~~~~~~~vi~~D~ 71 (317)
T 1wm1_A 16 SGWLDTGDGHRIYWELSGNPN--------GKPAVFIHGGPGGG---------IS-------PHHRQLFDPERYKVLLFDQ 71 (317)
T ss_dssp EEEEECSSSCEEEEEEEECTT--------SEEEEEECCTTTCC---------CC-------GGGGGGSCTTTEEEEEECC
T ss_pred eeEEEcCCCcEEEEEEcCCCC--------CCcEEEECCCCCcc---------cc-------hhhhhhccccCCeEEEECC
Confidence 344555588888766554321 14578899975210 00 0112233357999999665
Q ss_pred CCcCCCCCCCCc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 564 IPIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 564 ~~~~g~g~~~~~----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
+ |+|.+... ........+|+.+.++.+ +.+++.++||||||.+++.++.++|++++++|+.++
T Consensus 72 ~---G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 138 (317)
T 1wm1_A 72 R---GCGRSRPHASLDNNTTWHLVADIERLREMA------GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGI 138 (317)
T ss_dssp T---TSTTCBSTTCCTTCSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred C---CCCCCCCCcccccccHHHHHHHHHHHHHHc------CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEecc
Confidence 5 55655332 123445566666655443 346899999999999999999999999999998764
No 368
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.70 E-value=1.1e-08 Score=112.54 Aligned_cols=132 Identities=20% Similarity=0.182 Sum_probs=86.5
Q ss_pred ccCCeEEEEEEEecCCCCC-CCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCCCc
Q 005240 489 RKDGVPLTATLYLPPGYDQ-SKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPI 566 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~-~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~ 566 (706)
++|.. ...+|.|..... ....++|+|||+|||++..|+. ..+. ...|++ .|++|+.++||-.
T Consensus 108 sEdcL--~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~--------~~~~------~~~la~~~~~vvv~~~YRl~ 171 (574)
T 3bix_A 108 SEDCL--YLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTG--------NLYD------GSVLASYGNVIVITVNYRLG 171 (574)
T ss_dssp CSCCC--EEEEEEEC--------CCEEEEEECCCSSSSSCCG--------GGSC------CHHHHHHHTCEEEEECCCCH
T ss_pred CCcCC--EEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCC--------CccC------chhhhccCCEEEEEeCCcCc
Confidence 45664 445888976421 0123589999999998754322 1111 134565 4799999888732
Q ss_pred -CCCCCCCCchhhHHHHHHHHHHHHHHHHHc--CC-CCCCcEEEEEechHHHHHHHHHHhCC---CceeEEEeccCC
Q 005240 567 -IGEGDKLPNDRFVEQLVSSAEAAVEEVVRR--GV-ADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGS 636 (706)
Q Consensus 567 -~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~--~~-id~~~i~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~ 636 (706)
.|+.........++..+.|+.+|++|++++ .+ .||+||.|+|.|+||.+++.++.... .+|+++|+.+|.
T Consensus 172 ~~Gfl~~~~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 172 VLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHCCCSSSSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred ccccCcCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 233221111111234589999999999985 23 79999999999999999999886543 579999998874
No 369
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.70 E-value=6.6e-07 Score=97.77 Aligned_cols=143 Identities=10% Similarity=-0.047 Sum_probs=80.8
Q ss_pred ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCC-ee-EEcccCCCCCCCCcccCccCCCCcce--eee
Q 005240 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK-LV-RELCDLPPAEDIPVCYNSVREGMRSI--SWR 250 (706)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~-~~l~~~~~~~~~p~~~~~~~~g~~~~--~~s 250 (706)
..+..++|+|++ .|+..+.+ ..|.+||+.++ .. ..+..+. ..+..+ .|+
T Consensus 267 ~~v~sv~~s~~~-~lasgs~D-------------gtV~lWD~~~~~~~~~~~~~H~-------------~~V~sv~~~~s 319 (524)
T 2j04_B 267 SLITTFDFLSPT-TVVCGFKN-------------GFVAEFDLTDPEVPSFYDQVHD-------------SYILSVSTAYS 319 (524)
T ss_dssp TCEEEEEESSSS-EEEEEETT-------------SEEEEEETTBCSSCSEEEECSS-------------SCEEEEEEECC
T ss_pred CCEEEEEecCCC-eEEEEeCC-------------CEEEEEECCCCCCceEEeeccc-------------ccEEEEEEEcC
Confidence 578899999875 56544433 38999999854 22 1222221 124455 678
Q ss_pred cCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC-ceEEeecc--cccccceecCCCceEEEEeeccccceEEE
Q 005240 251 ADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK-PEILHKLD--LRFRSVSWCDDSLALVNETWYKTSQTRTW 327 (706)
Q Consensus 251 pdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~l~ 327 (706)
|+|...|+ .... ...|.+||+ ..++ +..+.... ..+..++|+||++.|+..+.. . .|.
T Consensus 320 ~~g~~~la-S~S~-----------D~tvklWD~---~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d--~--tv~ 380 (524)
T 2j04_B 320 DFEDTVVS-TVAV-----------DGYFYIFNP---KDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGA--S--SLR 380 (524)
T ss_dssp TTSCCEEE-EEET-----------TSEEEEECG---GGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSS--S--EEE
T ss_pred CCCCeEEE-Eecc-----------CCeEEEEEC---CCCCcccccccccccCcccceEeCCCcCeEEEeCCC--C--cEE
Confidence 88844133 2211 125788887 3332 22333322 246789999999987765422 2 356
Q ss_pred EEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 328 LVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 328 ~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
++|+.++. ....+.. ... ....++|||+|+.|+...
T Consensus 381 lwd~~~~~-~~~~l~g-H~~------~V~sva~Sp~g~~l~Sgs 416 (524)
T 2j04_B 381 AVPSRAAF-AVHPLVS-RET------TITAIGVSRLHPMVLAGS 416 (524)
T ss_dssp EEETTCTT-CCEEEEE-CSS------CEEEEECCSSCCBCEEEE
T ss_pred EEECcccc-cceeeec-CCC------ceEEEEeCCCCCeEEEEE
Confidence 66776642 2233322 111 123477899999877654
No 370
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=98.69 E-value=2.7e-07 Score=93.18 Aligned_cols=116 Identities=12% Similarity=0.108 Sum_probs=72.5
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..+..... + . -|.||++||.+.+. ..+..|. .....|++ +|.|+..+.+ |+
T Consensus 23 ~~g~~l~y~~~---g----~---g~~vvllHG~~~~~--------~~~~~~~----~~~~~L~~-~~~vi~~Dl~---G~ 76 (296)
T 1j1i_A 23 AGGVETRYLEA---G----K---GQPVILIHGGGAGA--------ESEGNWR----NVIPILAR-HYRVIAMDML---GF 76 (296)
T ss_dssp ETTEEEEEEEE---C----C---SSEEEEECCCSTTC--------CHHHHHT----TTHHHHTT-TSEEEEECCT---TS
T ss_pred ECCEEEEEEec---C----C---CCeEEEECCCCCCc--------chHHHHH----HHHHHHhh-cCEEEEECCC---CC
Confidence 47877775543 1 1 14688899953110 0111111 12344544 4999986665 55
Q ss_pred CCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 570 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 570 g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
|.+... ....+...+|+.+.++.+ + + .+++.++||||||.+++.++.++|++++++|+.++.
T Consensus 77 G~S~~~~~~~~~~~~~~dl~~~l~~l---~-~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 140 (296)
T 1j1i_A 77 GKTAKPDIEYTQDRRIRHLHDFIKAM---N-F-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSA 140 (296)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHS---C-C-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc---C-C-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCC
Confidence 555421 123455566666555433 2 2 268999999999999999999999999999998764
No 371
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.68 E-value=2.4e-06 Score=88.09 Aligned_cols=185 Identities=10% Similarity=0.050 Sum_probs=110.4
Q ss_pred CcccceeeCC--CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCC
Q 005240 31 AKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (706)
Q Consensus 31 ~~~~~~~~SP--DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~ 108 (706)
..+....|+| +|++|+.... ...|.++|+.+++..++..... ...+..+.|+|||++|+..+.
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~----------dg~i~~wd~~~~~~~~~~~~~~---~~~i~~~~~~pdg~~lasg~~-- 190 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADN----------RGTIGFQSYEDDSQYIVHSAKS---DVEYSSGVLHKDSLLLALYSP-- 190 (343)
T ss_dssp SCEEEEECCC---CCEEEEEET----------TCCEEEEESSSSCEEEEECCCS---SCCCCEEEECTTSCEEEEECT--
T ss_pred CCEEEEEcCCCCCCCEEEEEeC----------CCcEEEEECCCCcEEEEEecCC---CCceEEEEECCCCCEEEEEcC--
Confidence 3588899999 9999987642 2567788988888765542221 112678899999998887532
Q ss_pred CCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-c-eecCC-C-ceEeeeeeC
Q 005240 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-A-KDFGT-P-AVYTAVEPS 183 (706)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~-~~lt~-~-~~~~~~~~S 183 (706)
.+.|.++|+ +++ . ..+.. . ..+..++|+
T Consensus 191 -----------------------------------------------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 191 -----------------------------------------------DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp -----------------------------------------------TSCEEEEESSCTTSCCEECCCCTTSCEEEEEEC
T ss_pred -----------------------------------------------CCEEEEEECCCCCCCccEEeccCCCCEEEEEEe
Confidence 157888898 553 3 45655 3 788999999
Q ss_pred CCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEe
Q 005240 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEA 262 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~ 262 (706)
|||++|+..+ . ..|.+||+...+. ..+....... .+ .+...++|+|+|+. |+....
T Consensus 224 ~~g~~l~s~~-~-------------~~v~iwd~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~g~~-l~~~s~ 280 (343)
T 3lrv_A 224 DNGYWMVVEC-D-------------QTVVCFDLRKDVGTLAYPTYTIPE-FK-------TGTVTYDIDDSGKN-MIAYSN 280 (343)
T ss_dssp TTSSEEEEEE-S-------------SBEEEEETTSSTTCBSSCCCBC-------------CCEEEEECTTSSE-EEEEET
T ss_pred CCCCEEEEEe-C-------------CeEEEEEcCCCCcceeeccccccc-cc-------ccceEEEECCCCCE-EEEecC
Confidence 9999998766 2 1699999985532 2222111000 00 00024899999986 553311
Q ss_pred ccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecC---CCceEEEEe
Q 005240 263 QDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCD---DSLALVNET 317 (706)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wsp---Dg~~l~~~~ 317 (706)
++. .+.+++. +.+....-. ..+..+.|++ +++.+++..
T Consensus 281 ---~d~--------~i~v~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~ 321 (343)
T 3lrv_A 281 ---ESN--------SLTIYKF---DKKTKNWTK---DEESALCLQSDTADFTDMDVVC 321 (343)
T ss_dssp ---TTT--------EEEEEEE---CTTTCSEEE---EEEEECCC----CCCCEEEEEE
T ss_pred ---CCC--------cEEEEEE---cccccceEe---cCceeEecCccccccceeEEEe
Confidence 011 2455555 222211111 3344567887 777777665
No 372
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=98.67 E-value=3.6e-07 Score=92.08 Aligned_cols=114 Identities=11% Similarity=-0.041 Sum_probs=76.0
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCC
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 568 (706)
..+|..+....+-+ -|+||++||.+.. ...+. ..+..|++ +|.|+..+.+ |
T Consensus 15 ~~~g~~l~~~~~g~----------~~~vv~lHG~~~~-----------~~~~~----~~~~~L~~-~~~vi~~D~~---G 65 (302)
T 1mj5_A 15 EIKGRRMAYIDEGT----------GDPILFQHGNPTS-----------SYLWR----NIMPHCAG-LGRLIACDLI---G 65 (302)
T ss_dssp EETTEEEEEEEESC----------SSEEEEECCTTCC-----------GGGGT----TTGGGGTT-SSEEEEECCT---T
T ss_pred EECCEEEEEEEcCC----------CCEEEEECCCCCc-----------hhhhH----HHHHHhcc-CCeEEEEcCC---C
Confidence 34788887665521 2679999997421 11121 12233444 4788886665 4
Q ss_pred CCCCCCch------hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 569 EGDKLPND------RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 569 ~g~~~~~~------~~~~~~~~D~~~~~~~l~~~~~id~-~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
+|.+.... .......+|+.++++.+ +. .++.++|||+||.+++.++.++|++++++|+.+|..
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 135 (302)
T 1mj5_A 66 MGDSDKLDPSGPERYAYAEHRDYLDALWEAL------DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIA 135 (302)
T ss_dssp STTSCCCSSCSTTSSCHHHHHHHHHHHHHHT------TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECC
T ss_pred CCCCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccC
Confidence 45443321 23556667776666654 33 789999999999999999999999999999998765
No 373
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.66 E-value=6.1e-06 Score=85.22 Aligned_cols=179 Identities=11% Similarity=0.077 Sum_probs=121.4
Q ss_pred eeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhc
Q 005240 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (706)
Q Consensus 62 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (706)
..|+.+++++.+...+...... ...++|++.+..||+.-.
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~~-----~~~l~~d~~~~~ly~~D~----------------------------------- 92 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLEN-----AIALDFHHRRELVFWSDV----------------------------------- 92 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCSC-----EEEEEEETTTTEEEEEET-----------------------------------
T ss_pred cceEEEeCCCCeeEEeecCCCc-----eEEEEEeccccEEEEEec-----------------------------------
Confidence 5789999988777666433322 567899988888887621
Q ss_pred cCCchhhhhhhhcccceEEEEccCC-Cceec-CCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC
Q 005240 142 LKDEYDESLFDYYTTAQLVLGSLDG-TAKDF-GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (706)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~l-t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 218 (706)
....|++++++| ..+.+ ..+ .....+++.+.+..|+++.... ..|+++++++
T Consensus 93 -------------~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~------------~~I~~~~~dG 147 (349)
T 3v64_C 93 -------------TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT------------SRIEVANLDG 147 (349)
T ss_dssp -------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTT------------TEEEEEETTS
T ss_pred -------------cCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCC------------CeEEEEcCCC
Confidence 126799999977 44443 323 4566888999889998876542 4899999998
Q ss_pred CeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec-
Q 005240 219 KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL- 297 (706)
Q Consensus 219 ~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~- 297 (706)
+..+.+..... ..+..+++.|++.. |||.... . ...|++++. ++...+.+...
T Consensus 148 ~~~~~l~~~~l------------~~P~~iavdp~~g~-ly~td~~---~-------~~~I~r~~~---dG~~~~~~~~~~ 201 (349)
T 3v64_C 148 AHRKVLLWQSL------------EKPRAIALHPMEGT-IYWTDWG---N-------TPRIEASSM---DGSGRRIIADTH 201 (349)
T ss_dssp CSCEEEECTTC------------SCEEEEEEETTTTE-EEEEECS---S-------SCEEEEEET---TSCSCEESCCSS
T ss_pred CceEEEEeCCC------------CCcceEEEecCcCe-EEEeccC---C-------CCEEEEEeC---CCCCcEEEEECC
Confidence 76666543221 12447889998776 8877321 1 135888888 56555555432
Q ss_pred ccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 298 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 298 ~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
-.....++|+|++..|+++.. ...+|+++++++.
T Consensus 202 ~~~PnGla~d~~~~~lY~aD~---~~~~I~~~~~dG~ 235 (349)
T 3v64_C 202 LFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGS 235 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC
T ss_pred CCCcceEEEeCCCCEEEEEEC---CCCEEEEEeCCCC
Confidence 334567899999888988742 3457999999873
No 374
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.66 E-value=8.9e-06 Score=85.99 Aligned_cols=200 Identities=7% Similarity=-0.052 Sum_probs=120.9
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
....++|+|||+ |+++ . .....|++++++++..+.+...... .. ++|+|+|+.|++....
T Consensus 132 ~P~~la~d~~g~-lyv~-d--------~~~~~I~~id~~~g~~~~~~~~~~~-----~~-ia~~~~g~~l~~~d~~---- 191 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLAY-Q--------RDDPRVRLISVDDNKVTTVHPGFKG-----GK-PAVTKDKQRVYSIGWE---- 191 (409)
T ss_dssp CEEEEEECSTTE-EEEE-E--------TTTTEEEEEETTTTEEEEEEETCCB-----CB-CEECTTSSEEEEEBSS----
T ss_pred CceEEEEeCCCC-EEEE-e--------cCCCcEEEEECCCCEEEEeeccCCC-----Cc-eeEecCCCcEEEEecC----
Confidence 456788999998 5443 2 3446899999998887776533221 34 8999999987776321
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC--Cceec----C-CCceEeeeeeCC
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG--TAKDF----G-TPAVYTAVEPSP 184 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g--~~~~l----t-~~~~~~~~~~Sp 184 (706)
....|++++..+ ..+.+ . .......++++|
T Consensus 192 -------------------------------------------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p 228 (409)
T 3hrp_A 192 -------------------------------------------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDE 228 (409)
T ss_dssp -------------------------------------------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECT
T ss_pred -------------------------------------------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeC
Confidence 112788888843 33344 2 224567899999
Q ss_pred CCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCc-ceeeecCCCceEEEEEec
Q 005240 185 DQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMR-SISWRADKPSTLYWVEAQ 263 (706)
Q Consensus 185 DG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~-~~~~spdg~~~l~~~~~~ 263 (706)
++..|++.. . ...|++++++++....+....... .. ...+. .++|+|++.. ||+.. .
T Consensus 229 ~~g~lyv~d-~------------~~~I~~~d~~~~~~~~~~~~~~~g-~~------~~~P~~~ia~~p~~g~-lyv~d-~ 286 (409)
T 3hrp_A 229 TEEWLYFVD-S------------NKNFGRFNVKTQEVTLIKQLELSG-SL------GTNPGPYLIYYFVDSN-FYMSD-Q 286 (409)
T ss_dssp TSSEEEEEC-T------------TCEEEEEETTTCCEEEEEECCCCS-CC------CCSSCCEEEEETTTTE-EEEEE-T
T ss_pred CCCeEEEEE-C------------CCcEEEEECCCCCEEEEecccccC-CC------CCCccccEEEeCCCCE-EEEEe-C
Confidence 777887733 2 137999999877655442211100 00 01123 7899997665 76552 1
Q ss_pred cCCCCccccCccceeeeecCCCCCCCCceEEeecc---------------cccccceecCCCceEEEEeeccccceEEEE
Q 005240 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD---------------LRFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (706)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~---------------~~~~~~~wspDg~~l~~~~~~~~~~~~l~~ 328 (706)
....|++++. ++ ....+.... .....++++|||. |+++. .. ...+|++
T Consensus 287 ----------~~~~I~~~~~---~g-~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad-~~-~~~~I~~ 349 (409)
T 3hrp_A 287 ----------NLSSVYKITP---DG-ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVD-GF-KGYCLRK 349 (409)
T ss_dssp ----------TTTEEEEECT---TC-CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEE-TT-TTCEEEE
T ss_pred ----------CCCEEEEEec---CC-CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEe-CC-CCCEEEE
Confidence 1235778876 33 333333221 1245678999998 55543 20 3457999
Q ss_pred EcCCC
Q 005240 329 VCPGS 333 (706)
Q Consensus 329 ~d~~~ 333 (706)
+++.+
T Consensus 350 ~~~~~ 354 (409)
T 3hrp_A 350 LDILD 354 (409)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 99665
No 375
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=98.65 E-value=1.5e-07 Score=95.05 Aligned_cols=114 Identities=14% Similarity=0.029 Sum_probs=80.6
Q ss_pred eEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCC
Q 005240 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 572 (706)
Q Consensus 493 ~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 572 (706)
..++....-|.+ . -|.||++||.+.. ...|. ..+..|++.||.|++++-+ |+|.+
T Consensus 33 ~~l~y~~~G~~~-----~--g~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~rvia~Dl~---G~G~S 87 (297)
T 2xt0_A 33 LRMHYVDEGPRD-----A--EHTFLCLHGEPSW-----------SFLYR----KMLPVFTAAGGRVVAPDLF---GFGRS 87 (297)
T ss_dssp CCEEEEEESCTT-----C--SCEEEEECCTTCC-----------GGGGT----TTHHHHHHTTCEEEEECCT---TSTTS
T ss_pred eEEEEEEccCCC-----C--CCeEEEECCCCCc-----------ceeHH----HHHHHHHhCCcEEEEeCCC---CCCCC
Confidence 788776664421 0 1568889996421 11121 2456788899999996554 66666
Q ss_pred CCc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 573 LPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 573 ~~~----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
... ........+|+.+.++.+ +-+++.++||||||.+++.++.++|++++++|..++..
T Consensus 88 ~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~ 150 (297)
T 2xt0_A 88 DKPTDDAVYTFGFHRRSLLAFLDAL------QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTAL 150 (297)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHH------TCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCC
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHh------CCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCC
Confidence 432 223566778888777766 23689999999999999999999999999999988743
No 376
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=98.63 E-value=1.7e-07 Score=93.49 Aligned_cols=82 Identities=13% Similarity=0.075 Sum_probs=63.7
Q ss_pred hHHHHHHHCCeEEEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC
Q 005240 546 TSSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 623 (706)
Q Consensus 546 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~ 623 (706)
..+..|++.||.|+..+.+ |+|.+... ....+...+|+.+.++.+ +.+++.++||||||.+++.++.++
T Consensus 41 ~~~~~L~~~g~~vi~~D~~---G~G~S~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~ 111 (277)
T 1brt_A 41 RQSAALLDAGYRVITYDRR---GFGQSSQPTTGYDYDTFAADLNTVLETL------DLQDAVLVGFSTGTGEVARYVSSY 111 (277)
T ss_dssp HHHHHHHHTTCEEEEECCT---TSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHHHhhCCCEEEEeCCC---CCCCCCCCCCCccHHHHHHHHHHHHHHh------CCCceEEEEECccHHHHHHHHHHc
Confidence 3456788899999996665 55655432 224566778888888766 236899999999999999999999
Q ss_pred CC-ceeEEEeccCC
Q 005240 624 PH-LFCCGIARSGS 636 (706)
Q Consensus 624 p~-~~~a~v~~~~~ 636 (706)
|+ +++++|..++.
T Consensus 112 p~~~v~~lvl~~~~ 125 (277)
T 1brt_A 112 GTARIAKVAFLASL 125 (277)
T ss_dssp CSTTEEEEEEESCC
T ss_pred CcceEEEEEEecCc
Confidence 99 99999998863
No 377
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.63 E-value=3.8e-06 Score=86.09 Aligned_cols=231 Identities=9% Similarity=0.071 Sum_probs=132.0
Q ss_pred cceeEeecCCCCCCCCe-eeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceee-cccCCC
Q 005240 5 TGIGIHRLLPDDSLGPE-KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKP-LFESPD 82 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-lt~~~~ 82 (706)
..|.+.|..+ ++. +++. .+.....+++|||| +| |+.+ .....|+++|+++++... +.-...
T Consensus 64 ~~v~viD~~t----~~~~~~i~---~~~~p~~i~~~~~g-~l-yv~~--------~~~~~v~~iD~~t~~~~~~i~~g~~ 126 (328)
T 3dsm_A 64 HVIFAIDINT----FKEVGRIT---GFTSPRYIHFLSDE-KA-YVTQ--------IWDYRIFIINPKTYEITGYIECPDM 126 (328)
T ss_dssp TEEEEEETTT----CCEEEEEE---CCSSEEEEEEEETT-EE-EEEE--------BSCSEEEEEETTTTEEEEEEECTTC
T ss_pred CEEEEEECcc----cEEEEEcC---CCCCCcEEEEeCCC-eE-EEEE--------CCCCeEEEEECCCCeEEEEEEcCCc
Confidence 4577888866 665 4443 44457788999998 55 5543 234789999999887653 321110
Q ss_pred ccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEE
Q 005240 83 ICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLG 162 (706)
Q Consensus 83 ~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~ 162 (706)
.........+.+ ++++|++... . ....|.++
T Consensus 127 ~~~~~~p~~i~~--~~~~lyv~~~---~--------------------------------------------~~~~v~vi 157 (328)
T 3dsm_A 127 DMESGSTEQMVQ--YGKYVYVNCW---S--------------------------------------------YQNRILKI 157 (328)
T ss_dssp CTTTCBCCCEEE--ETTEEEEEEC---T--------------------------------------------TCCEEEEE
T ss_pred cccCCCcceEEE--ECCEEEEEcC---C--------------------------------------------CCCEEEEE
Confidence 000001345566 4555665421 0 01578889
Q ss_pred cc-CCC-ceecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCcc
Q 005240 163 SL-DGT-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSV 240 (706)
Q Consensus 163 ~l-~g~-~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~ 240 (706)
|+ +++ ...+..+.....+.++|||+ ++++...... ..++......|+++|..+.++......+..
T Consensus 158 D~~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~--~~~~~~~~~~v~~id~~t~~v~~~~~~~~g---------- 224 (328)
T 3dsm_A 158 DTETDKVVDELTIGIQPTSLVMDKYNK-MWTITDGGYE--GSPYGYEAPSLYRIDAETFTVEKQFKFKLG---------- 224 (328)
T ss_dssp ETTTTEEEEEEECSSCBCCCEECTTSE-EEEEBCCBCT--TCSSCBCCCEEEEEETTTTEEEEEEECCTT----------
T ss_pred ECCCCeEEEEEEcCCCccceEEcCCCC-EEEEECCCcc--CCccccCCceEEEEECCCCeEEEEEecCCC----------
Confidence 98 553 33444344556888999997 5555543210 000011125799999987765532222110
Q ss_pred CCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceE--Eeec-ccccccceecCCCceEEEEe
Q 005240 241 REGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEI--LHKL-DLRFRSVSWCDDSLALVNET 317 (706)
Q Consensus 241 ~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~--l~~~-~~~~~~~~wspDg~~l~~~~ 317 (706)
..+..++++||++. ||+. +. .|+++|. ++++... +... ......++++|++..|+.+.
T Consensus 225 -~~p~~la~~~d~~~-lyv~-~~-------------~v~~~d~---~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 225 -DWPSEVQLNGTRDT-LYWI-NN-------------DIWRMPV---EADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp -CCCEEEEECTTSCE-EEEE-SS-------------SEEEEET---TCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred -CCceeEEEecCCCE-EEEE-cc-------------EEEEEEC---CCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 12457899999986 6654 21 3788888 5555421 1111 34456788999766666653
Q ss_pred ec-cccceEEEEEcCCC
Q 005240 318 WY-KTSQTRTWLVCPGS 333 (706)
Q Consensus 318 ~~-~~~~~~l~~~d~~~ 333 (706)
.. -.....|+++|+++
T Consensus 286 ~~~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 286 AIDYQQQGIVYRYSPQG 302 (328)
T ss_dssp CTTSSSEEEEEEECTTC
T ss_pred ccccccCCEEEEECCCC
Confidence 11 01356789999874
No 378
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.62 E-value=2e-06 Score=90.60 Aligned_cols=52 Identities=15% Similarity=0.112 Sum_probs=34.5
Q ss_pred ceEEEEcc-CC-CceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCe
Q 005240 157 AQLVLGSL-DG-TAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL 220 (706)
Q Consensus 157 ~~l~~~~l-~g-~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 220 (706)
..|.++|+ ++ ....+... ..+..++|+|++..++++.... ..|.+||+.+++
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d------------~~v~~wd~~t~~ 220 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN------------GNIRIFDWTLNL 220 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT------------SEEEEEETTCCC
T ss_pred CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC------------CEEEEEECCCCc
Confidence 46777787 44 33333333 6778999999997655554432 379999998553
No 379
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=98.61 E-value=3.9e-07 Score=90.34 Aligned_cols=117 Identities=15% Similarity=0.112 Sum_probs=80.1
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..++...+-|++ . +-|.||++||-+.. ...| ...+..|+ .+|.|+..+.+ |+
T Consensus 9 ~~g~~l~y~~~g~~~----~--~~~~vvllHG~~~~-----------~~~~----~~~~~~L~-~~~~vi~~D~~---G~ 63 (266)
T 2xua_A 9 VNGTELHYRIDGERH----G--NAPWIVLSNSLGTD-----------LSMW----APQVAALS-KHFRVLRYDTR---GH 63 (266)
T ss_dssp CSSSEEEEEEESCSS----S--CCCEEEEECCTTCC-----------GGGG----GGGHHHHH-TTSEEEEECCT---TS
T ss_pred ECCEEEEEEEcCCcc----C--CCCeEEEecCccCC-----------HHHH----HHHHHHHh-cCeEEEEecCC---CC
Confidence 478888887775431 0 13678999995321 1111 12345554 56999986554 55
Q ss_pred CCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 570 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 570 g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
|.+... ........+|+.+.++.+ ..+++.++||||||.+++.++.++|++++++|..++..
T Consensus 64 G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~ 127 (266)
T 2xua_A 64 GHSEAPKGPYTIEQLTGDVLGLMDTL------KIARANFCGLSMGGLTGVALAARHADRIERVALCNTAA 127 (266)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCC
Confidence 655432 223566777888777765 23589999999999999999999999999999987653
No 380
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=98.61 E-value=2.2e-07 Score=92.15 Aligned_cols=100 Identities=9% Similarity=0.033 Sum_probs=70.8
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCch---hhHHHHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAV 590 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~D~~~~~ 590 (706)
|.||++||.+.. ...|. .....|++.||.|+.++-+ |+|.+.... ...+...+|+.+.+
T Consensus 11 ~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~~via~Dl~---G~G~S~~~~~~~~~~~~~a~dl~~~l 72 (264)
T 2wfl_A 11 KHFVLVHGGCLG-----------AWIWY----KLKPLLESAGHKVTAVDLS---AAGINPRRLDEIHTFRDYSEPLMEVM 72 (264)
T ss_dssp CEEEEECCTTCC-----------GGGGT----THHHHHHHTTCEEEEECCT---TSTTCSCCGGGCCSHHHHHHHHHHHH
T ss_pred CeEEEECCCccc-----------cchHH----HHHHHHHhCCCEEEEeecC---CCCCCCCCcccccCHHHHHHHHHHHH
Confidence 678889996421 11121 3456777899999996654 566654321 23566677777766
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
+.+ +. .+++.++||||||.+++.++.++|++++++|..++.
T Consensus 73 ~~l---~~--~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~ 113 (264)
T 2wfl_A 73 ASI---PP--DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAM 113 (264)
T ss_dssp HHS---CT--TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSC
T ss_pred HHh---CC--CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeec
Confidence 654 21 268999999999999999999999999999988763
No 381
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=98.61 E-value=2.7e-07 Score=92.11 Aligned_cols=81 Identities=16% Similarity=0.111 Sum_probs=62.9
Q ss_pred HHHHHHHCCeEEEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCC
Q 005240 547 SSLIFLARRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP 624 (706)
Q Consensus 547 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p 624 (706)
.+..|+++||.|+..+.+ |+|.+... ....+...+|+.++++.+ +.+++.++||||||.+++.++.++|
T Consensus 42 ~~~~L~~~g~~vi~~D~~---G~G~S~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p 112 (279)
T 1hkh_A 42 QTRELLAQGYRVITYDRR---GFGGSSKVNTGYDYDTFAADLHTVLETL------DLRDVVLVGFSMGTGELARYVARYG 112 (279)
T ss_dssp HHHHHHHTTEEEEEECCT---TSTTSCCCSSCCSHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHHC
T ss_pred hHHHHHhCCcEEEEeCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHhc------CCCceEEEEeChhHHHHHHHHHHcC
Confidence 456788899999996665 45555332 223556678888887766 3468999999999999999999999
Q ss_pred C-ceeEEEeccCC
Q 005240 625 H-LFCCGIARSGS 636 (706)
Q Consensus 625 ~-~~~a~v~~~~~ 636 (706)
+ +++++|..++.
T Consensus 113 ~~~v~~lvl~~~~ 125 (279)
T 1hkh_A 113 HERVAKLAFLASL 125 (279)
T ss_dssp STTEEEEEEESCC
T ss_pred ccceeeEEEEccC
Confidence 8 99999998864
No 382
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=98.60 E-value=1.5e-07 Score=95.71 Aligned_cols=114 Identities=16% Similarity=0.050 Sum_probs=81.4
Q ss_pred eEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCC
Q 005240 493 VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDK 572 (706)
Q Consensus 493 ~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~ 572 (706)
..++....-|++ . -|.||++||.+.. ...|. ..+..|++.||.|++++-+ |+|.+
T Consensus 34 ~~l~y~~~G~~~-----~--g~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~rvia~Dl~---G~G~S 88 (310)
T 1b6g_A 34 LRAHYLDEGNSD-----A--EDVFLCLHGEPTW-----------SYLYR----KMIPVFAESGARVIAPDFF---GFGKS 88 (310)
T ss_dssp CEEEEEEEECTT-----C--SCEEEECCCTTCC-----------GGGGT----TTHHHHHHTTCEEEEECCT---TSTTS
T ss_pred eEEEEEEeCCCC-----C--CCEEEEECCCCCc-----------hhhHH----HHHHHHHhCCCeEEEeCCC---CCCCC
Confidence 788877665421 0 1568889996521 11121 2456788899999996554 66766
Q ss_pred CCc----hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 573 LPN----DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 573 ~~~----~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
... ....+...+|+.+.++.| +-+++.++||||||.+++.++.++|++++++|..++..
T Consensus 89 ~~~~~~~~y~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~ 151 (310)
T 1b6g_A 89 DKPVDEEDYTFEFHRNFLLALIERL------DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXL 151 (310)
T ss_dssp CEESCGGGCCHHHHHHHHHHHHHHH------TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCC
T ss_pred CCCCCcCCcCHHHHHHHHHHHHHHc------CCCCEEEEEcChHHHHHHHHHHhChHhheEEEEecccc
Confidence 432 123567788888877766 23689999999999999999999999999999987643
No 383
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.59 E-value=2.4e-05 Score=77.11 Aligned_cols=195 Identities=9% Similarity=-0.028 Sum_probs=110.5
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
....++++|||+ |+++.. .....|++++..++....+..... ..+..+++++||+ |++...
T Consensus 25 ~p~~i~~~~~g~-l~v~~~--------~~~~~i~~~~~~~~~~~~~~~~~~----~~p~~i~~~~~g~-l~v~~~----- 85 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSE--------GMYGRVVKLATGSTGTTVLPFNGL----YQPQGLAVDGAGT-VYVTDF----- 85 (270)
T ss_dssp CEEEEEECTTCC-EEEEEC--------SSSCEEEEECC-----EECCCCSC----CSCCCEEECTTCC-EEEEET-----
T ss_pred CccceEECCCCC-EEEEcc--------CCCCcEEEecCCCcccceEeeCCc----CCcceeEECCCCC-EEEEcC-----
Confidence 456788999997 544132 234689999887766554432111 1256789999998 554421
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecCCC--ceEeeeeeCCCCcE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKY 188 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt~~--~~~~~~~~SpDG~~ 188 (706)
...|++++.++ ....+... .....++++|||+
T Consensus 86 --------------------------------------------~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~- 120 (270)
T 1rwi_B 86 --------------------------------------------NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA- 120 (270)
T ss_dssp --------------------------------------------TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-
T ss_pred --------------------------------------------CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-
Confidence 15788888866 44433322 4677899999997
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~ 268 (706)
|++.... ...|++++..+.......... . ..+..++++++|+ ||+....
T Consensus 121 l~v~~~~------------~~~i~~~~~~~~~~~~~~~~~--~----------~~p~~i~~~~~g~--l~v~~~~----- 169 (270)
T 1rwi_B 121 VYVADRG------------NNRVVKLAAGSKTQTVLPFTG--L----------NDPDGVAVDNSGN--VYVTDTD----- 169 (270)
T ss_dssp EEEEEGG------------GTEEEEECTTCCSCEECCCCS--C----------CSCCCEEECTTCC--EEEEEGG-----
T ss_pred EEEEECC------------CCEEEEEECCCceeEeecccc--C----------CCceeEEEeCCCC--EEEEECC-----
Confidence 5555432 236888865544322221110 0 1244778999986 6654211
Q ss_pred ccccCccceeeeecCCCCCCCCceEEeec-ccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 269 ~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
...|++++. +++........ ......+.++++| .|++... ....|++++.++.
T Consensus 170 ------~~~i~~~~~---~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~---~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 170 ------NNRVVKLEA---ESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEH---NTNQVVKLLAGST 223 (270)
T ss_dssp ------GTEEEEECT---TTCCEEECCCSSCCSEEEEEECTTC-CEEEEET---TTSCEEEECTTCS
T ss_pred ------CCEEEEEec---CCCceEeecccCCCCceEEEECCCC-CEEEEEC---CCCcEEEEcCCCC
Confidence 124778887 44443332211 2445677899998 4554432 2345889998763
No 384
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.59 E-value=1.2e-06 Score=90.61 Aligned_cols=93 Identities=12% Similarity=-0.076 Sum_probs=55.7
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCC-Ccc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESP-DIC 84 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~-~~~ 84 (706)
.|++.|+++ ++. +..++.+... .+.+||||++|+...........+.....|.++|+.+++...-...+ ...
T Consensus 47 ~vsvID~~t----~~v--~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGC----GVT--LGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTT----TEE--EEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCC----CeE--EEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 567877755 433 3445566545 89999999999665421000011123478999999998754432111 000
Q ss_pred --ccccccceEEecCCcEEEEEe
Q 005240 85 --LNAVFGSFVWVNNSTLLIFTI 105 (706)
Q Consensus 85 --~~~~~~~~~wSpDg~~l~~~~ 105 (706)
.......+.+||||++||+..
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFL 142 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEE
T ss_pred cccCCCcceEEEcCCCCEEEEEc
Confidence 001256889999999988763
No 385
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.59 E-value=1.7e-05 Score=83.52 Aligned_cols=179 Identities=12% Similarity=-0.041 Sum_probs=120.5
Q ss_pred eeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhc
Q 005240 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (706)
Q Consensus 62 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (706)
..|+.++++++....+...... +..++|++.+..||++-.
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~-----~~~l~~d~~~~~lywsD~----------------------------------- 131 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL----------------------------------- 131 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSC-----EEEEEEETTTTEEEEEET-----------------------------------
T ss_pred ceeEEEccCCcceeEeccccCc-----ceEEeeeeccCceEEEec-----------------------------------
Confidence 6899999998876666433222 567899998888887621
Q ss_pred cCCchhhhhhhhcccceEEEEccCC-----Cceec-CCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEE
Q 005240 142 LKDEYDESLFDYYTTAQLVLGSLDG-----TAKDF-GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (706)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~~l~g-----~~~~l-t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~ 214 (706)
....|++++++| ....+ ... .....+++.+.++.|+++.... ..|.++
T Consensus 132 -------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~------------~~I~~~ 186 (400)
T 3p5b_L 132 -------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL------------GTVSVA 186 (400)
T ss_dssp -------------TTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTT------------TEEEEE
T ss_pred -------------CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCC------------CeEEEE
Confidence 125788888865 22333 323 5667888988888898776442 489999
Q ss_pred ecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEE
Q 005240 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (706)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 294 (706)
+++++..+.+..... ..++.++..|.+.. |||... +. ...|++++. ++...+.+
T Consensus 187 ~~~g~~~~~l~~~~~------------~~P~~iavdp~~g~-ly~td~---~~-------~~~I~~~~~---dG~~~~~~ 240 (400)
T 3p5b_L 187 DTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDW---GT-------PAKIKKGGL---NGVDIYSL 240 (400)
T ss_dssp CTTTCSEEEEEECSS------------CCEEEEEEETTTTE-EEEEEC---SS-------SCCEEEEET---TSCSCEEE
T ss_pred eCCCCceEEEEeCCC------------CCcceEEEecccCe-EEEEeC---CC-------CCEEEEEeC---CCCccEEE
Confidence 999887776654321 12457888987776 887631 11 124888888 66666666
Q ss_pred eec-ccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 295 HKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 295 ~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
... -.....+++++++..|+++.. ...+|+++|+++.
T Consensus 241 ~~~~l~~P~glavd~~~~~lY~aD~---~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGG 278 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC
T ss_pred EECCCCceEEEEEEeCCCEEEEEEC---CCCEEEEEeCCCC
Confidence 443 245667899999998998742 3457999999874
No 386
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=98.58 E-value=5.4e-08 Score=98.22 Aligned_cols=101 Identities=15% Similarity=0.084 Sum_probs=75.4
Q ss_pred CCCCCCcEEEEEechHHHHHHHHHHhCCCcee-EEEeccCCC-CC--------------C--------------------
Q 005240 597 GVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC-CGIARSGSY-NK--------------T-------------------- 640 (706)
Q Consensus 597 ~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~-a~v~~~~~~-d~--------------~-------------------- 640 (706)
..||++||+|+|+|+||+||+.++.++|++|+ +++++++.. .. .
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 85 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIASV 85 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCCG
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhhcccCChh
Confidence 34899999999999999999999999999999 877666521 00 0
Q ss_pred ----CCCcc------------chHHHHHHHHHhCC--CcEEEEEeCCCCccCCCccc------------------HHHHH
Q 005240 641 ----LTPFG------------FQAERFFDALKGHG--ALSRLVLLPFEHHVYAAREN------------------VMHVI 684 (706)
Q Consensus 641 ----~~~~~------------~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~~~~~~------------------~~~~~ 684 (706)
..|.. -+.++++++|+..+ .+++++++++++|.+..... .....
T Consensus 86 ~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d~~ 165 (318)
T 2d81_A 86 ANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDGA 165 (318)
T ss_dssp GGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSCHH
T ss_pred HcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCChHH
Confidence 00110 03348999999887 37999999999999753322 25778
Q ss_pred HHHHHHHHHHhcc
Q 005240 685 WETDRWLQKYCLS 697 (706)
Q Consensus 685 ~~~~~f~~~~l~~ 697 (706)
.+|++||...+.+
T Consensus 166 ~~i~~ff~g~~~~ 178 (318)
T 2d81_A 166 GAALKWIYGSLNA 178 (318)
T ss_dssp HHHHHHHHSSCCC
T ss_pred HHHHHHHhccCCC
Confidence 8999999887653
No 387
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=98.58 E-value=7.2e-07 Score=89.80 Aligned_cols=113 Identities=15% Similarity=0.040 Sum_probs=78.2
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCC
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 568 (706)
..+|..++....- + -|.||++||.+.. ...+ ...+..|++ ||.|+..+.+ |
T Consensus 19 ~~~g~~l~~~~~g-------~---~~~vv~lHG~~~~-----------~~~~----~~~~~~l~~-~~~v~~~D~~---G 69 (306)
T 3r40_A 19 NTSSGRIFARVGG-------D---GPPLLLLHGFPQT-----------HVMW----HRVAPKLAE-RFKVIVADLP---G 69 (306)
T ss_dssp CCTTCCEEEEEEE-------C---SSEEEEECCTTCC-----------GGGG----GGTHHHHHT-TSEEEEECCT---T
T ss_pred EeCCEEEEEEEcC-------C---CCeEEEECCCCCC-----------HHHH----HHHHHHhcc-CCeEEEeCCC---C
Confidence 3478888766642 1 2679999997421 1112 134556666 9999996665 4
Q ss_pred CCCCCCc-------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 569 EGDKLPN-------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 569 ~g~~~~~-------~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
+|.+... ........+|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++|+.++.
T Consensus 70 ~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 138 (306)
T 3r40_A 70 YGWSDMPESDEQHTPYTKRAMAKQLIEAMEQL------GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDIL 138 (306)
T ss_dssp STTSCCCCCCTTCGGGSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCCCCCCCcccCCCCHHHHHHHHHHHHHHh------CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCC
Confidence 4544332 223556666766666553 3468999999999999999999999999999999974
No 388
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.58 E-value=3.5e-06 Score=88.76 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=29.5
Q ss_pred eeeeecCCCCCCCC-ceEEeecccccccceecCCCceEEEEe
Q 005240 277 IIYTQPAEPAEGEK-PEILHKLDLRFRSVSWCDDSLALVNET 317 (706)
Q Consensus 277 ~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~wspDg~~l~~~~ 317 (706)
.|++||+ ..++ ...+......+..++|||||+.|+..+
T Consensus 340 ~V~lwd~---~~~~~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 340 LIQLINT---YEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp EEEEEET---TCTTCCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEC---CCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 5889998 4444 344556677899999999999999875
No 389
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=98.56 E-value=6e-07 Score=90.37 Aligned_cols=118 Identities=15% Similarity=0.095 Sum_probs=77.6
Q ss_pred cCC-eEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCC
Q 005240 490 KDG-VPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (706)
Q Consensus 490 ~dg-~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 568 (706)
.+| ..++....-+ ++.|.||++||.+.+. .++..|. .....|++. |.|++.+.+ |
T Consensus 20 ~~g~~~l~y~~~G~--------g~~~~vvllHG~~pg~--------~~~~~w~----~~~~~L~~~-~~via~Dl~---G 75 (291)
T 2wue_A 20 VDGPLKLHYHEAGV--------GNDQTVVLLHGGGPGA--------ASWTNFS----RNIAVLARH-FHVLAVDQP---G 75 (291)
T ss_dssp SSSEEEEEEEEECT--------TCSSEEEEECCCCTTC--------CHHHHTT----TTHHHHTTT-SEEEEECCT---T
T ss_pred eCCcEEEEEEecCC--------CCCCcEEEECCCCCcc--------chHHHHH----HHHHHHHhc-CEEEEECCC---C
Confidence 478 7887665421 1235789999952100 0111121 123455544 999986655 5
Q ss_pred CCCCCCc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 569 EGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 569 ~g~~~~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
+|.+... ....+...+|+.+.++.+ +.+++.++||||||.+++.++.++|++++++|+.++..
T Consensus 76 ~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~ 141 (291)
T 2wue_A 76 YGHSDKRAEHGQFNRYAAMALKGLFDQL------GLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGG 141 (291)
T ss_dssp STTSCCCSCCSSHHHHHHHHHHHHHHHH------TCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSS
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHh------CCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCC
Confidence 5655432 224556677777766655 23689999999999999999999999999999998753
No 390
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.56 E-value=2e-05 Score=80.05 Aligned_cols=179 Identities=12% Similarity=-0.041 Sum_probs=117.1
Q ss_pred eeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhc
Q 005240 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (706)
Q Consensus 62 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (706)
..|.++++++++...+...... +..+.|++++..||+.-.
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~-----p~g~~~d~~~~~ly~~D~----------------------------------- 49 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL----------------------------------- 49 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSS-----EEEEEEETTTTEEEEEET-----------------------------------
T ss_pred CeEEEEECCCcceEehhcCCCc-----eEEEEEEeCCCEEEEEEC-----------------------------------
Confidence 5799999998876665432221 567899998888887631
Q ss_pred cCCchhhhhhhhcccceEEEEccCC-----Cceec-CCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEE
Q 005240 142 LKDEYDESLFDYYTTAQLVLGSLDG-----TAKDF-GTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (706)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~~l~g-----~~~~l-t~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~ 214 (706)
....|++++++| ..+.+ ... .....+++.+.++.|+++... ...|.++
T Consensus 50 -------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~------------~~~I~~~ 104 (316)
T 1ijq_A 50 -------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSVA 104 (316)
T ss_dssp -------------TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred -------------CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECC------------CCEEEEE
Confidence 125788888854 22332 222 455688898888889877543 2489999
Q ss_pred ecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEE
Q 005240 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (706)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 294 (706)
+++++..+.+..... ..+..++..|++.. |||... +. ...|++++. ++...+.+
T Consensus 105 ~~~g~~~~~~~~~~~------------~~P~~iavdp~~g~-ly~~d~---~~-------~~~I~~~~~---dG~~~~~~ 158 (316)
T 1ijq_A 105 DTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDW---GT-------PAKIKKGGL---NGVDIYSL 158 (316)
T ss_dssp ETTSSSEEEEEECTT------------CCEEEEEEETTTTE-EEEEEC---SS-------SCEEEEEET---TSCCEEEE
T ss_pred eCCCCceEEEEECCC------------CCcceEEeCCCCCE-EEEEcc---CC-------CCeEEEEcC---CCCCeEEE
Confidence 999877666654221 12447889987776 887631 11 135888887 55555555
Q ss_pred eec-ccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 295 HKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 295 ~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
... -.....++|++++..|+++.. ...+|+++|+++.
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~---~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGG 196 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC
T ss_pred EECCCCCceEEEEeccCCEEEEEEC---CCCeEEEEecCCC
Confidence 432 334567889999988988642 3457999999873
No 391
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=98.56 E-value=3.3e-07 Score=91.28 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=68.8
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCch---hhHHHHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAV 590 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~D~~~~~ 590 (706)
|.||++||.+.. ...|. .....|++.||.|+.++-+ |+|.+.... ...+...+|+.+.+
T Consensus 5 ~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~rVia~Dl~---G~G~S~~~~~~~~~~~~~a~dl~~~l 66 (273)
T 1xkl_A 5 KHFVLVHGACHG-----------GWSWY----KLKPLLEAAGHKVTALDLA---ASGTDLRKIEELRTLYDYTLPLMELM 66 (273)
T ss_dssp CEEEEECCTTCC-----------GGGGT----THHHHHHHTTCEEEECCCT---TSTTCCCCGGGCCSHHHHHHHHHHHH
T ss_pred CeEEEECCCCCC-----------cchHH----HHHHHHHhCCCEEEEecCC---CCCCCccCcccccCHHHHHHHHHHHH
Confidence 568889996421 11121 3456778899999996554 566664321 23555666666655
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
+.+ +. .+++.+.||||||++++.++.++|++++++|..++
T Consensus 67 ~~l---~~--~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~ 106 (273)
T 1xkl_A 67 ESL---SA--DEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAA 106 (273)
T ss_dssp HTS---CS--SSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred HHh---cc--CCCEEEEecCHHHHHHHHHHHhChHhheEEEEEec
Confidence 433 21 26899999999999999999999999999998775
No 392
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=98.55 E-value=3.7e-07 Score=93.91 Aligned_cols=127 Identities=13% Similarity=0.125 Sum_probs=81.5
Q ss_pred EEEEEEccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcC
Q 005240 483 EMIKYQRKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGP 562 (706)
Q Consensus 483 ~~~~~~~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~ 562 (706)
+.+.+.. + ..+....+-|.. +. .|+||++||-+. +...+. +....+..| +.||.|+..+
T Consensus 16 ~~~~~~~-~-~~~~y~~~g~~~---~~---~~~vvllHG~~~-----------~~~~~~-~~~~l~~~L-~~g~~Vi~~D 74 (335)
T 2q0x_A 16 HLFTYYK-D-PYCKIPVFMMNM---DA---RRCVLWVGGQTE-----------SLLSFD-YFTNLAEEL-QGDWAFVQVE 74 (335)
T ss_dssp EEEEEEE-E-TTEEEEEEEECT---TS---SSEEEEECCTTC-----------CTTCST-THHHHHHHH-TTTCEEEEEC
T ss_pred EEEecCC-C-CceeEEEeccCC---CC---CcEEEEECCCCc-----------cccchh-HHHHHHHHH-HCCcEEEEEe
Confidence 4444554 3 455555555321 11 367888999421 111110 001233444 7899999864
Q ss_pred CC-CcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHH--hCCCceeEEEeccCCC
Q 005240 563 SI-PIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLA--HAPHLFCCGIARSGSY 637 (706)
Q Consensus 563 ~~-~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~--~~p~~~~a~v~~~~~~ 637 (706)
.+ ..+|+|.+. ......|+.++++++.+. .+..++.++||||||.+++.++. ++|++++++|+.+|..
T Consensus 75 l~~D~~G~G~S~-----~~~~~~d~~~~~~~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~ 145 (335)
T 2q0x_A 75 VPSGKIGSGPQD-----HAHDAEDVDDLIGILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVC 145 (335)
T ss_dssp CGGGBTTSCSCC-----HHHHHHHHHHHHHHHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECC
T ss_pred ccCCCCCCCCcc-----ccCcHHHHHHHHHHHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcc
Confidence 32 345777652 234567888888888774 35579999999999999999998 5799999999988753
No 393
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.55 E-value=6.7e-05 Score=80.21 Aligned_cols=297 Identities=13% Similarity=0.023 Sum_probs=156.0
Q ss_pred cceeEeecCCCCCCCCeeeeecCCC-CCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPD-GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDI 83 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~ 83 (706)
..|.+.++.. ++.... +.. ...+..+.|+ ++.|+... ....|.++|+++++..........
T Consensus 139 g~i~vwd~~~----~~~~~~--~~~h~~~v~~~~~~--~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~h~~ 200 (445)
T 2ovr_B 139 NTLKVWSAVT----GKCLRT--LVGHTGGVWSSQMR--DNIIISGS----------TDRTLKVWNAETGECIHTLYGHTS 200 (445)
T ss_dssp SCEEEEETTT----CCEEEE--CCCCSSCEEEEEEE--TTEEEEEE----------TTSCEEEEETTTTEEEEEECCCSS
T ss_pred CcEEEEECCC----CcEEEE--EcCCCCCEEEEEec--CCEEEEEe----------CCCeEEEEECCcCcEEEEECCCCC
Confidence 3577888866 543332 222 2246677776 55665543 235677778887765544322211
Q ss_pred cccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEc
Q 005240 84 CLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGS 163 (706)
Q Consensus 84 ~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~ 163 (706)
.+..+.|+ ++.|+..+. .+.|.+++
T Consensus 201 ----~v~~~~~~--~~~l~s~s~-------------------------------------------------dg~i~~wd 225 (445)
T 2ovr_B 201 ----TVRCMHLH--EKRVVSGSR-------------------------------------------------DATLRVWD 225 (445)
T ss_dssp ----CEEEEEEE--TTEEEEEET-------------------------------------------------TSEEEEEE
T ss_pred ----cEEEEEec--CCEEEEEeC-------------------------------------------------CCEEEEEE
Confidence 25566664 555665532 15788888
Q ss_pred c-CCCc-eecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeE-EcccCCCCCCCCcccCc
Q 005240 164 L-DGTA-KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNS 239 (706)
Q Consensus 164 l-~g~~-~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~~p~~~~~ 239 (706)
+ +++. ..+... ..+..+.| ||+.|+..+.. ..|.+|++.+++.. .+....
T Consensus 226 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~~~~----------- 279 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD-------------FMVKVWDPETETCLHTLQGHT----------- 279 (445)
T ss_dssp SSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT-------------SCEEEEEGGGTEEEEEECCCS-----------
T ss_pred CCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC-------------CEEEEEECCCCcEeEEecCCC-----------
Confidence 8 4543 333333 56667777 88888766543 37999999865433 332211
Q ss_pred cCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-EEeecccccccceecCCCceEEEEee
Q 005240 240 VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETW 318 (706)
Q Consensus 240 ~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~ 318 (706)
..+..+.| |+.. |+.. .. .+.|.++|+ .+++.. .+......+..+.+ ++..|+..+.
T Consensus 280 --~~v~~~~~--~~~~-l~~~-~~-----------d~~i~i~d~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 337 (445)
T 2ovr_B 280 --NRVYSLQF--DGIH-VVSG-SL-----------DTSIRVWDV---ETGNCIHTLTGHQSLTSGMEL--KDNILVSGNA 337 (445)
T ss_dssp --SCEEEEEE--CSSE-EEEE-ET-----------TSCEEEEET---TTCCEEEEECCCCSCEEEEEE--ETTEEEEEET
T ss_pred --CceEEEEE--CCCE-EEEE-eC-----------CCeEEEEEC---CCCCEEEEEcCCcccEEEEEE--eCCEEEEEeC
Confidence 11234555 6664 4422 11 124788888 444433 33334444444444 5666666542
Q ss_pred ccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCcee
Q 005240 319 YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLD 398 (706)
Q Consensus 319 ~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~ 398 (706)
...|.++|+.++ +......... ...........++++|+.... + ..+.
T Consensus 338 ----dg~i~vwd~~~~--~~~~~~~~~~-----~~~~~v~~~~~~~~~l~s~~~-------------d--------g~v~ 385 (445)
T 2ovr_B 338 ----DSTVKIWDIKTG--QCLQTLQGPN-----KHQSAVTCLQFNKNFVITSSD-------------D--------GTVK 385 (445)
T ss_dssp ----TSCEEEEETTTC--CEEEEECSTT-----SCSSCEEEEEECSSEEEEEET-------------T--------SEEE
T ss_pred ----CCeEEEEECCCC--cEEEEEccCC-----CCCCCEEEEEECCCEEEEEeC-------------C--------CeEE
Confidence 224666777663 2222222110 001111122335666655431 1 1466
Q ss_pred eeecCCCceeeeec-ccchhhhhhhhhhccCCCceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 005240 399 LFDINTGSKERIWE-SNREKYFETAVALVFGQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (706)
Q Consensus 399 ~~d~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~ 461 (706)
.+|+.+|+..+... .... ..........|+||+..++....+...+..++++|+..
T Consensus 386 iwd~~~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 386 LWDLKTGEFIRNLVTLESG-------GSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEETTTCCEEEEEEECTTG-------GGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEECCCCceeeeeeccccC-------CCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 67887776544331 1100 01112235789999876666655655578899998754
No 394
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.53 E-value=2.3e-05 Score=82.05 Aligned_cols=210 Identities=12% Similarity=0.069 Sum_probs=133.2
Q ss_pred CCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCC
Q 005240 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (706)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg 98 (706)
+..+.+. +.......+.|.|++.+|+++. .....|++++++++..+.+...... ....+++.+.+
T Consensus 106 ~~~~~~~--~~~~~~~gl~~d~~~~~ly~~D---------~~~~~I~r~~~~g~~~~~~~~~~~~----~p~glavd~~~ 170 (386)
T 3v65_B 106 SEYTLLL--NNLENAIALDFHHRRELVFWSD---------VTLDRILRANLNGSNVEEVVSTGLE----SPGGLAVDWVH 170 (386)
T ss_dssp CCCEEEE--CSCSCEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCCEEEEECSSCS----CCCCEEEETTT
T ss_pred CcEEEEe--cCCCccEEEEEecCCCeEEEEe---------CCCCcEEEEecCCCCcEEEEeCCCC----CccEEEEEeCC
Confidence 4444443 2333567889999999997764 3346899999998876655322211 14577888888
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecC-CC-c
Q 005240 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TP-A 175 (706)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt-~~-~ 175 (706)
..||++-. ....|++++++| ..+.+. .. .
T Consensus 171 g~lY~~d~------------------------------------------------~~~~I~~~~~dg~~~~~l~~~~l~ 202 (386)
T 3v65_B 171 DKLYWTDS------------------------------------------------GTSRIEVANLDGAHRKVLLWQSLE 202 (386)
T ss_dssp TEEEEEET------------------------------------------------TTTEEEECBTTSCSCEEEECSSCS
T ss_pred CeEEEEcC------------------------------------------------CCCeEEEEeCCCCceEEeecCCCC
Confidence 88887631 125788888887 333333 23 5
Q ss_pred eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCc
Q 005240 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (706)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~ 255 (706)
....+++.|++.+|+++.... ...|+++++++...+.+..... ..+..++|+|+++.
T Consensus 203 ~P~giavdp~~g~ly~td~~~-----------~~~I~r~~~dG~~~~~~~~~~~------------~~PnGlavd~~~~~ 259 (386)
T 3v65_B 203 KPRAIALHPMEGTIYWTDWGN-----------TPRIEASSMDGSGRRIIADTHL------------FWPNGLTIDYAGRR 259 (386)
T ss_dssp CEEEEEEETTTTEEEEEECSS-----------SCEEEEEETTSCSCEEEECSSC------------SCEEEEEEEGGGTE
T ss_pred CCcEEEEEcCCCeEEEeccCC-----------CCEEEEEeCCCCCcEEEEECCC------------CCeeeEEEeCCCCE
Confidence 678899999999998876442 2489999999887666644321 11347899998887
Q ss_pred eEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec-ccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
|||+.. ....|++++. +++..+.+... ......++. ++..|+++.+ ...+|++++..++
T Consensus 260 -lY~aD~-----------~~~~I~~~d~---dG~~~~~~~~~~~~~P~giav--~~~~ly~td~---~~~~V~~~~~~~G 319 (386)
T 3v65_B 260 -MYWVDA-----------KHHVIERANL---DGSHRKAVISQGLPHPFAITV--FEDSLYWTDW---HTKSINSANKFTG 319 (386)
T ss_dssp -EEEEET-----------TTTEEEEECT---TSCSCEEEECSSCSSEEEEEE--ETTEEEEEET---TTTEEEEEETTTC
T ss_pred -EEEEEC-----------CCCEEEEEeC---CCCeeEEEEECCCCCceEEEE--ECCEEEEeeC---CCCeEEEEECCCC
Confidence 887732 1235888888 56555555432 223344445 3335666542 3446888885443
No 395
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.52 E-value=5.1e-05 Score=81.11 Aligned_cols=268 Identities=13% Similarity=0.064 Sum_probs=144.8
Q ss_pred eeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCC
Q 005240 37 SWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKT 116 (706)
Q Consensus 37 ~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~ 116 (706)
.+++||++|+.... ...|.++|+.+++.......... .+..+.|+ ++.|+..+.
T Consensus 124 ~~~~~g~~l~sg~~----------dg~i~vwd~~~~~~~~~~~~h~~----~v~~~~~~--~~~l~s~~~---------- 177 (445)
T 2ovr_B 124 CLQFCGNRIVSGSD----------DNTLKVWSAVTGKCLRTLVGHTG----GVWSSQMR--DNIIISGST---------- 177 (445)
T ss_dssp EEEEETTEEEEEET----------TSCEEEEETTTCCEEEECCCCSS----CEEEEEEE--TTEEEEEET----------
T ss_pred EEEEcCCEEEEEEC----------CCcEEEEECCCCcEEEEEcCCCC----CEEEEEec--CCEEEEEeC----------
Confidence 58889999987642 35778889888876544322211 25667776 556665532
Q ss_pred CCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-ceEeeeeeCCCCcEEEEEe
Q 005240 117 MVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLITS 193 (706)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~SpDG~~i~~~~ 193 (706)
.+.|.++++ +++ ...+... ..+..+.|+ ++.|+..+
T Consensus 178 ---------------------------------------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s 216 (445)
T 2ovr_B 178 ---------------------------------------DRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGS 216 (445)
T ss_dssp ---------------------------------------TSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEE
T ss_pred ---------------------------------------CCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEe
Confidence 156777888 553 3344433 567777774 56666554
Q ss_pred eccCcccccccccccceEEEEecCCCeeE-EcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCcccc
Q 005240 194 MHRPYSYKVPCARFSQKVQVWTTDGKLVR-ELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEV 272 (706)
Q Consensus 194 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~ 272 (706)
.. ..|.+|++.+++.. .+.... ..+..+.| +++. |+... .
T Consensus 217 ~d-------------g~i~~wd~~~~~~~~~~~~~~-------------~~v~~~~~--~~~~-l~~~~-~--------- 257 (445)
T 2ovr_B 217 RD-------------ATLRVWDIETGQCLHVLMGHV-------------AAVRCVQY--DGRR-VVSGA-Y--------- 257 (445)
T ss_dssp TT-------------SEEEEEESSSCCEEEEEECCS-------------SCEEEEEE--CSSC-EEEEE-T---------
T ss_pred CC-------------CEEEEEECCCCcEEEEEcCCc-------------ccEEEEEE--CCCE-EEEEc-C---------
Confidence 33 37999999865433 332221 11224455 6665 44331 1
Q ss_pred CccceeeeecCCCCCCCCc-eEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCCCceeeecCccccccc
Q 005240 273 SPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYS 351 (706)
Q Consensus 273 ~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~ 351 (706)
.+.|.++|+ .+++. ..+......+..+.| |+..|+..+. ...|.++|+.++ +........
T Consensus 258 --dg~i~iwd~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~----d~~i~i~d~~~~--~~~~~~~~~------ 318 (445)
T 2ovr_B 258 --DFMVKVWDP---ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL----DTSIRVWDVETG--NCIHTLTGH------ 318 (445)
T ss_dssp --TSCEEEEEG---GGTEEEEEECCCSSCEEEEEE--CSSEEEEEET----TSCEEEEETTTC--CEEEEECCC------
T ss_pred --CCEEEEEEC---CCCcEeEEecCCCCceEEEEE--CCCEEEEEeC----CCeEEEEECCCC--CEEEEEcCC------
Confidence 124778887 44433 334445566777777 7887777652 224677777764 222222211
Q ss_pred CCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccchhhhhhhhhhccCCCc
Q 005240 352 DPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNREKYFETAVALVFGQGE 431 (706)
Q Consensus 352 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 431 (706)
......+++++++++.... + ..+..+|+.+++.......... ... ..
T Consensus 319 --~~~v~~~~~~~~~l~~~~~-------------d--------g~i~vwd~~~~~~~~~~~~~~~--------~~~--~v 365 (445)
T 2ovr_B 319 --QSLTSGMELKDNILVSGNA-------------D--------STVKIWDIKTGQCLQTLQGPNK--------HQS--AV 365 (445)
T ss_dssp --CSCEEEEEEETTEEEEEET-------------T--------SCEEEEETTTCCEEEEECSTTS--------CSS--CE
T ss_pred --cccEEEEEEeCCEEEEEeC-------------C--------CeEEEEECCCCcEEEEEccCCC--------CCC--CE
Confidence 1111233456666555431 1 1366677777765443332110 001 11
Q ss_pred eecccCCCEEEEEEecCCCCcEEEEEECCCCceeE
Q 005240 432 EDINLNQLKILTSKESKTEITQYHILSWPLKKSSQ 466 (706)
Q Consensus 432 ~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~~~~~~ 466 (706)
..++.+++.|+....+ ..|.+||+.+++...
T Consensus 366 ~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 366 TCLQFNKNFVITSSDD----GTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEECSSEEEEEETT----SEEEEEETTTCCEEE
T ss_pred EEEEECCCEEEEEeCC----CeEEEEECCCCceee
Confidence 2334456655554333 469999998876543
No 396
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=98.52 E-value=3.7e-07 Score=90.62 Aligned_cols=98 Identities=12% Similarity=0.075 Sum_probs=68.6
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCch---hhHHHHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAV 590 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~D~~~~~ 590 (706)
|.||++||.+.. ...|. ..+..|++ +|.|+..+.+ |+|.+.... ...+...+|+.+.+
T Consensus 17 ~~vvllHG~~~~-----------~~~~~----~~~~~L~~-~~~vi~~Dl~---G~G~S~~~~~~~~~~~~~~~dl~~~l 77 (269)
T 2xmz_A 17 QVLVFLHGFLSD-----------SRTYH----NHIEKFTD-NYHVITIDLP---GHGEDQSSMDETWNFDYITTLLDRIL 77 (269)
T ss_dssp EEEEEECCTTCC-----------GGGGT----TTHHHHHT-TSEEEEECCT---TSTTCCCCTTSCCCHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCc-----------HHHHH----HHHHHHhh-cCeEEEecCC---CCCCCCCCCCCccCHHHHHHHHHHHH
Confidence 358899996421 11221 23455655 4999986654 556554431 24556677777766
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
+.+ +.+++.++||||||.+|+.++.++|++++++|+.++.
T Consensus 78 ~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 117 (269)
T 2xmz_A 78 DKY------KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTS 117 (269)
T ss_dssp GGG------TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCC
T ss_pred HHc------CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCC
Confidence 654 3468999999999999999999999999999998864
No 397
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.51 E-value=3.2e-05 Score=78.56 Aligned_cols=220 Identities=10% Similarity=0.041 Sum_probs=136.0
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCC----CceeecccC
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET----GEAKPLFES 80 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~----g~~~~lt~~ 80 (706)
..|...+++. ++...+. +.......+.|+|++++|+++. .....|+++++++ .....+...
T Consensus 10 ~~I~~i~~~~----~~~~~~~--~~~~~p~g~~~d~~~~~ly~~D---------~~~~~I~~~~~~g~~~~~~~~~~~~~ 74 (316)
T 1ijq_A 10 HEVRKMTLDR----SEYTSLI--PNLRNVVALDTEVASNRIYWSD---------LSQRMICSTQLDRAHGVSSYDTVISR 74 (316)
T ss_dssp SSEEEEETTS----CCCEEEE--CSCSSEEEEEEETTTTEEEEEE---------TTTTEEEEEEC--------CEEEECS
T ss_pred CeEEEEECCC----cceEehh--cCCCceEEEEEEeCCCEEEEEE---------CCCCcEEEEECCCCCCCcccEEEEeC
Confidence 4566777755 5554443 3444577899999999998864 3347899999887 333333211
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEE
Q 005240 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (706)
Q Consensus 81 ~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~ 160 (706)
. +. .+..+++.+.++.||++-. ....|.
T Consensus 75 ~---~~-~p~glavd~~~~~ly~~d~------------------------------------------------~~~~I~ 102 (316)
T 1ijq_A 75 D---IQ-APDGLAVDWIHSNIYWTDS------------------------------------------------VLGTVS 102 (316)
T ss_dssp S---CS-CCCEEEEETTTTEEEEEET------------------------------------------------TTTEEE
T ss_pred C---CC-CcCEEEEeecCCeEEEEEC------------------------------------------------CCCEEE
Confidence 1 11 1457788877777777621 125788
Q ss_pred EEccCC-CceecCC-C-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCccc
Q 005240 161 LGSLDG-TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCY 237 (706)
Q Consensus 161 ~~~l~g-~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~ 237 (706)
+++++| ..+.+.. . .....+++.|++.+|+++.... ...|++++++|...+.+.....
T Consensus 103 ~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~-----------~~~I~~~~~dG~~~~~~~~~~~-------- 163 (316)
T 1ijq_A 103 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENI-------- 163 (316)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS-----------SCEEEEEETTSCCEEEEECSSC--------
T ss_pred EEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC-----------CCeEEEEcCCCCCeEEEEECCC--------
Confidence 889987 3444432 2 5677899999999998775431 1479999999887666543221
Q ss_pred CccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecc---cccccceecCCCceEE
Q 005240 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD---LRFRSVSWCDDSLALV 314 (706)
Q Consensus 238 ~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~---~~~~~~~wspDg~~l~ 314 (706)
..+..++|+|+++. |||+... ...|+++|. +++..+.+.... .....++. ++..|+
T Consensus 164 ----~~P~gla~d~~~~~-lY~~D~~-----------~~~I~~~d~---dg~~~~~~~~~~~~~~~P~giav--~~~~ly 222 (316)
T 1ijq_A 164 ----QWPNGITLDLLSGR-LYWVDSK-----------LHSISSIDV---NGGNRKTILEDEKRLAHPFSLAV--FEDKVF 222 (316)
T ss_dssp ----SCEEEEEEETTTTE-EEEEETT-----------TTEEEEEET---TSCSCEEEEECTTTTSSEEEEEE--ETTEEE
T ss_pred ----CCceEEEEeccCCE-EEEEECC-----------CCeEEEEec---CCCceEEEeecCCccCCcEEEEE--ECCEEE
Confidence 12347899999887 8877321 235888888 666666654432 22234444 345666
Q ss_pred EEeeccccceEEEEEcCCCC
Q 005240 315 NETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 315 ~~~~~~~~~~~l~~~d~~~~ 334 (706)
++.. ...+|++++..++
T Consensus 223 ~~d~---~~~~V~~~~~~~g 239 (316)
T 1ijq_A 223 WTDI---INEAIFSANRLTG 239 (316)
T ss_dssp EEET---TTTEEEEEETTTC
T ss_pred EEEC---CCCeEEEEeCCCC
Confidence 6542 3457888887654
No 398
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=98.51 E-value=1.2e-06 Score=88.11 Aligned_cols=112 Identities=12% Similarity=0.018 Sum_probs=75.6
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..++....- . -|.||++||.+.. ...| ......|++. |.|++++-+ |+
T Consensus 16 ~~g~~l~y~~~G-------~---g~~lvllHG~~~~-----------~~~w----~~~~~~L~~~-~~via~Dl~---G~ 66 (294)
T 1ehy_A 16 LPDVKIHYVREG-------A---GPTLLLLHGWPGF-----------WWEW----SKVIGPLAEH-YDVIVPDLR---GF 66 (294)
T ss_dssp CSSCEEEEEEEE-------C---SSEEEEECCSSCC-----------GGGG----HHHHHHHHTT-SEEEEECCT---TS
T ss_pred ECCEEEEEEEcC-------C---CCEEEEECCCCcc-----------hhhH----HHHHHHHhhc-CEEEecCCC---CC
Confidence 477788765542 1 1468889996421 1111 1234445544 999986554 55
Q ss_pred CCCCCc------hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 570 GDKLPN------DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 570 g~~~~~------~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
|.+... ....+...+|+.+.++.+ .-+++.++||||||.+++.++.++|++++++|..++.
T Consensus 67 G~S~~~~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~ 133 (294)
T 1ehy_A 67 GDSEKPDLNDLSKYSLDKAADDQAALLDAL------GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPI 133 (294)
T ss_dssp TTSCCCCTTCGGGGCHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCS
T ss_pred CCCCCCccccccCcCHHHHHHHHHHHHHHc------CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCC
Confidence 655432 223556677777766654 2368999999999999999999999999999998863
No 399
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.50 E-value=4.4e-05 Score=78.75 Aligned_cols=210 Identities=12% Similarity=0.069 Sum_probs=132.6
Q ss_pred CCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCC
Q 005240 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (706)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg 98 (706)
...+.+. +.......+.|+|++++|+++. .....|+.++++++..+.+...... ....++..+.+
T Consensus 63 ~~~~~~~--~~~~~~~~l~~d~~~~~ly~~D---------~~~~~I~r~~~~g~~~~~~~~~~~~----~p~glavd~~~ 127 (349)
T 3v64_C 63 SEYTLLL--NNLENAIALDFHHRRELVFWSD---------VTLDRILRANLNGSNVEEVVSTGLE----SPGGLAVDWVH 127 (349)
T ss_dssp CCEEEEE--CSCSCEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCSCEEEECSSCS----CCCEEEEETTT
T ss_pred CeeEEee--cCCCceEEEEEeccccEEEEEe---------ccCCceEEEecCCCCceEEEeCCCC----CccEEEEecCC
Confidence 4444443 2333467789999999998764 3346899999998876665322111 14567888878
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecC-CC-c
Q 005240 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TP-A 175 (706)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt-~~-~ 175 (706)
..||++-. ....|++++++| ..+.+. .. .
T Consensus 128 g~ly~~d~------------------------------------------------~~~~I~~~~~dG~~~~~l~~~~l~ 159 (349)
T 3v64_C 128 DKLYWTDS------------------------------------------------GTSRIEVANLDGAHRKVLLWQSLE 159 (349)
T ss_dssp TEEEEEET------------------------------------------------TTTEEEEEETTSCSCEEEECTTCS
T ss_pred CeEEEEcC------------------------------------------------CCCeEEEEcCCCCceEEEEeCCCC
Confidence 78887631 125789999988 333333 23 5
Q ss_pred eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCc
Q 005240 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (706)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~ 255 (706)
....+++.|++..|+++.... ...|++++++|...+.+..... ..+..++++|+++.
T Consensus 160 ~P~~iavdp~~g~ly~td~~~-----------~~~I~r~~~dG~~~~~~~~~~~------------~~PnGla~d~~~~~ 216 (349)
T 3v64_C 160 KPRAIALHPMEGTIYWTDWGN-----------TPRIEASSMDGSGRRIIADTHL------------FWPNGLTIDYAGRR 216 (349)
T ss_dssp CEEEEEEETTTTEEEEEECSS-----------SCEEEEEETTSCSCEESCCSSC------------SCEEEEEEETTTTE
T ss_pred CcceEEEecCcCeEEEeccCC-----------CCEEEEEeCCCCCcEEEEECCC------------CCcceEEEeCCCCE
Confidence 678899999999998876542 2489999999887666643221 11347899998887
Q ss_pred eEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec-ccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
|||+.. ....|++++. +++..+.+... ......++. +...|+++.+ ...+|++++..++
T Consensus 217 -lY~aD~-----------~~~~I~~~~~---dG~~~~~~~~~~~~~P~giav--~~~~ly~td~---~~~~V~~~~~~~G 276 (349)
T 3v64_C 217 -MYWVDA-----------KHHVIERANL---DGSHRKAVISQGLPHPFAITV--FEDSLYWTDW---HTKSINSANKFTG 276 (349)
T ss_dssp -EEEEET-----------TTTEEEEEET---TSCSCEEEECSSCSSEEEEEE--ETTEEEEEET---TTTEEEEEETTTC
T ss_pred -EEEEEC-----------CCCEEEEEeC---CCCceEEEEeCCCCCceEEEE--ECCEEEEecC---CCCeEEEEEccCC
Confidence 887732 1135888888 56555555432 223334444 3335665532 3346888885443
No 400
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=98.50 E-value=2.8e-07 Score=90.87 Aligned_cols=100 Identities=9% Similarity=-0.033 Sum_probs=69.7
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCch---hhHHHHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAV 590 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~D~~~~~ 590 (706)
|.||++||.+.. ...|. .....|++.||.|+.++-+ |+|.+.... ...+...+|+.+.+
T Consensus 4 ~~vvllHG~~~~-----------~~~w~----~~~~~L~~~g~~via~Dl~---G~G~S~~~~~~~~~~~~~a~dl~~~l 65 (257)
T 3c6x_A 4 AHFVLIHTICHG-----------AWIWH----KLKPLLEALGHKVTALDLA---ASGVDPRQIEEIGSFDEYSEPLLTFL 65 (257)
T ss_dssp CEEEEECCTTCC-----------GGGGT----THHHHHHHTTCEEEEECCT---TSTTCSCCGGGCCSHHHHTHHHHHHH
T ss_pred CcEEEEcCCccC-----------cCCHH----HHHHHHHhCCCEEEEeCCC---CCCCCCCCcccccCHHHHHHHHHHHH
Confidence 468889996421 11121 3456788899999996554 566654321 23556666766655
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
+.+ + ...++.+.||||||++++.++.++|++++++|..++.
T Consensus 66 ~~l---~--~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~ 106 (257)
T 3c6x_A 66 EAL---P--PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSV 106 (257)
T ss_dssp HTS---C--TTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred Hhc---c--ccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecc
Confidence 543 1 1258999999999999999999999999999987753
No 401
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=98.49 E-value=6.1e-07 Score=89.53 Aligned_cols=114 Identities=17% Similarity=0.072 Sum_probs=76.3
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..++.... +.+ .+ -|.||++||-+.. ...| ......| +.+|.|++++-+ |+
T Consensus 11 ~~g~~l~y~~~-~~G----~~--~p~vvllHG~~~~-----------~~~w----~~~~~~L-~~~~rvia~Dlr---Gh 64 (276)
T 2wj6_A 11 VFDNKLSYIDN-QRD----TD--GPAILLLPGWCHD-----------HRVY----KYLIQEL-DADFRVIVPNWR---GH 64 (276)
T ss_dssp ETTEEEEEEEC-CCC----CS--SCEEEEECCTTCC-----------GGGG----HHHHHHH-TTTSCEEEECCT---TC
T ss_pred eCCeEEEEEEe-cCC----CC--CCeEEEECCCCCc-----------HHHH----HHHHHHH-hcCCEEEEeCCC---CC
Confidence 47877765443 212 11 2678889995421 1111 1223334 467999986554 56
Q ss_pred CCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC-CCceeEEEeccC
Q 005240 570 GDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-PHLFCCGIARSG 635 (706)
Q Consensus 570 g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~-p~~~~a~v~~~~ 635 (706)
|.+... ....+...+|+.+.++.+ +-+++.++||||||.+++.++.++ |++++++|...+
T Consensus 65 G~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~ 127 (276)
T 2wj6_A 65 GLSPSEVPDFGYQEQVKDALEILDQL------GVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDW 127 (276)
T ss_dssp SSSCCCCCCCCHHHHHHHHHHHHHHH------TCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecc
Confidence 665432 223667788888887776 236899999999999999999999 999999998865
No 402
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=98.48 E-value=4e-07 Score=91.36 Aligned_cols=79 Identities=13% Similarity=0.040 Sum_probs=58.3
Q ss_pred HHHHHCCeEEEEcCCCCcCCCCCCCCc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC
Q 005240 549 LIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 625 (706)
Q Consensus 549 ~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~ 625 (706)
..|++ .|.|+.++.+ |+|.+... ....+...+|+.+.++.+ +.+++.++||||||.+++.++.++|+
T Consensus 58 ~~L~~-~~~vi~~D~~---G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~va~~~A~~~p~ 127 (286)
T 2puj_A 58 PFVDA-GYRVILKDSP---GFNKSDAVVMDEQRGLVNARAVKGLMDAL------DIDRAHLVGNAMGGATALNFALEYPD 127 (286)
T ss_dssp HHHHT-TCEEEEECCT---TSTTSCCCCCSSCHHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHCGG
T ss_pred HHHhc-cCEEEEECCC---CCCCCCCCCCcCcCHHHHHHHHHHHHHHh------CCCceEEEEECHHHHHHHHHHHhChH
Confidence 45554 4999986665 55655432 223556667776665544 34689999999999999999999999
Q ss_pred ceeEEEeccCCC
Q 005240 626 LFCCGIARSGSY 637 (706)
Q Consensus 626 ~~~a~v~~~~~~ 637 (706)
+++++|+.++..
T Consensus 128 ~v~~lvl~~~~~ 139 (286)
T 2puj_A 128 RIGKLILMGPGG 139 (286)
T ss_dssp GEEEEEEESCSC
T ss_pred hhheEEEECccc
Confidence 999999988753
No 403
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=98.47 E-value=1.1e-06 Score=87.84 Aligned_cols=118 Identities=15% Similarity=0.106 Sum_probs=74.8
Q ss_pred ccCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCC
Q 005240 489 RKDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIG 568 (706)
Q Consensus 489 ~~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g 568 (706)
..+|..++....-++ + .|+||++||.+.+. ..+..| ......|++ +|.|+.++.+ |
T Consensus 13 ~~~g~~l~y~~~g~~-------g-~p~vvllHG~~~~~--------~~~~~~----~~~~~~L~~-~~~vi~~D~~---G 68 (285)
T 1c4x_A 13 PSGTLASHALVAGDP-------Q-SPAVVLLHGAGPGA--------HAASNW----RPIIPDLAE-NFFVVAPDLI---G 68 (285)
T ss_dssp CCTTSCEEEEEESCT-------T-SCEEEEECCCSTTC--------CHHHHH----GGGHHHHHT-TSEEEEECCT---T
T ss_pred EECCEEEEEEecCCC-------C-CCEEEEEeCCCCCC--------cchhhH----HHHHHHHhh-CcEEEEecCC---C
Confidence 347777776554221 1 37789999952100 011111 122344544 5999986665 4
Q ss_pred CCCCCCc---hhhHHHH----HHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCC
Q 005240 569 EGDKLPN---DRFVEQL----VSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 569 ~g~~~~~---~~~~~~~----~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~ 636 (706)
+|.+... ....+.. .+|+.+.++.+ +.+++.++||||||.+++.++.++|++++++|..++.
T Consensus 69 ~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~ 137 (285)
T 1c4x_A 69 FGQSEYPETYPGHIMSWVGMRVEQILGLMNHF------GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSV 137 (285)
T ss_dssp STTSCCCSSCCSSHHHHHHHHHHHHHHHHHHH------TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCCCCCCcccchhhhhhhHHHHHHHHHHHh------CCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccC
Confidence 5554332 1234444 66666666554 2368999999999999999999999999999998864
No 404
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.47 E-value=4.2e-05 Score=79.55 Aligned_cols=254 Identities=15% Similarity=0.111 Sum_probs=125.6
Q ss_pred ccceeEeecCCCCCCCCeeeeecCC-------CCC-cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCcee
Q 005240 4 FTGIGIHRLLPDDSLGPEKEVHGYP-------DGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK 75 (706)
Q Consensus 4 ~~~~~~~~~~~~~~~g~~~~i~~~~-------~~~-~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 75 (706)
.+.|+|.|+.++. .+.+.++.+. .+. ....+..+||| | |++...+ .++++...|.++|.++.+..
T Consensus 105 s~~I~viD~~t~p--~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i-~Vs~~g~--~~g~~~g~v~vlD~~T~~v~ 177 (462)
T 2ece_A 105 SSRIYIIDTKPNP--REPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--I-YISALGN--EEGEGPGGILMLDHYSFEPL 177 (462)
T ss_dssp TCCEEEEECCSCT--TSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--E-EEEEEEE--TTSCSCCEEEEECTTTCCEE
T ss_pred CCeEEEEECCCCC--CCceeeeeechhhcccccCCCcccceeECCCe--E-EEEcCCC--cCCCCCCeEEEEECCCCeEE
Confidence 4679999997522 3444444331 121 34455799999 3 4443221 12356688999999988754
Q ss_pred ecccCCCcccccccc-ceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhc
Q 005240 76 PLFESPDICLNAVFG-SFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYY 154 (706)
Q Consensus 76 ~lt~~~~~~~~~~~~-~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 154 (706)
.-...+.. ...+. ++.|+||++.++...- ... + .+..... ..+ ... .
T Consensus 178 ~~~~~~~~--~~~~~Yd~~~~p~~~~mvsS~w--g~p-------------------~-----~~~~g~~-~~~--~~~-~ 225 (462)
T 2ece_A 178 GKWEIDRG--DQYLAYDFWWNLPNEVLVSSEW--AVP-------------------N-----TIEDGLK-LEH--LKD-R 225 (462)
T ss_dssp EECCSBCT--TCCCCCCEEEETTTTEEEECBC--CCH-------------------H-----HHTTCCC-TTT--HHH-H
T ss_pred EEEccCCC--CccccceEEECCCCCEEEEccC--cCc-------------------c-----ccccccc-hhh--hhh-c
Confidence 43221111 11122 5788999996554310 000 0 0000000 000 000 1
Q ss_pred ccceEEEEccC-CC-ceecCCC---ceEee--eeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEccc-
Q 005240 155 TTAQLVLGSLD-GT-AKDFGTP---AVYTA--VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD- 226 (706)
Q Consensus 155 ~~~~l~~~~l~-g~-~~~lt~~---~~~~~--~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~- 226 (706)
...+|.+++++ ++ ...+..+ ..... ++++|||+++++...... ....++|++|..+++..+.+..
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~-------~~Lss~V~v~~~d~g~~~~~~vI 298 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSL-------KDLSSSIWLWFYEDGKWNAEKVI 298 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEET-------TTCCEEEEEEEEETTEEEEEEEE
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeec-------cCCCceEEEEEecCCceeEEEEE
Confidence 23789999994 43 3334332 23333 355999999887665100 0013466665555443221111
Q ss_pred -CC---CCCCCC---cccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEee--c
Q 005240 227 -LP---PAEDIP---VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHK--L 297 (706)
Q Consensus 227 -~~---~~~~~p---~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~--~ 297 (706)
.+ .....| ..+.........+..||||+. || +++... +.|.++|+. +.+.++.+.. .
T Consensus 299 di~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrf-LY-VSnrg~----------d~VavfdV~--d~~~~~lv~~I~t 364 (462)
T 2ece_A 299 EIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKF-LY-LSLWGI----------GEVRQYDIS--NPFKPVLTGKVKL 364 (462)
T ss_dssp EECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCE-EE-EEETTT----------TEEEEEECS--STTSCEEEEEEEC
T ss_pred eCCCccccccccccccccccCCCceeEEEECCCCCE-EE-EEeCCC----------CEEEEEEec--CCCCcEEEEEEEe
Confidence 10 000111 000000123458899999997 66 444322 246666662 2334443321 1
Q ss_pred cc---------------ccccceecCCCceEEEEe
Q 005240 298 DL---------------RFRSVSWCDDSLALVNET 317 (706)
Q Consensus 298 ~~---------------~~~~~~wspDg~~l~~~~ 317 (706)
.+ ....+.+||||++|+++.
T Consensus 365 GG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 365 GGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp BTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 11 257788999999998875
No 405
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.47 E-value=1.1e-06 Score=89.32 Aligned_cols=84 Identities=17% Similarity=0.131 Sum_probs=62.1
Q ss_pred hHHHHHHHCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC
Q 005240 546 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 625 (706)
Q Consensus 546 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~ 625 (706)
...+.|.++||.|+..+.+ |+|.+.......+...+|+..+++.+ +.+++.++||||||.++..++.+.|+
T Consensus 32 ~l~~~L~~~G~~V~~~d~~---g~g~s~~~~~~~~~l~~~i~~~l~~~------~~~~v~lvGHS~GG~va~~~a~~~p~ 102 (320)
T 1ys1_X 32 GIQEDLQQRGATVYVANLS---GFQSDDGPNGRGEQLLAYVKTVLAAT------GATKVNLVGHSQGGLTSRYVAAVAPD 102 (320)
T ss_dssp THHHHHHHTTCCEEECCCC---SSCCSSSTTSHHHHHHHHHHHHHHHH------CCSCEEEEEETHHHHHHHHHHHHCGG
T ss_pred HHHHHHHhCCCEEEEEcCC---CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCEEEEEECHhHHHHHHHHHhChh
Confidence 4567888999999996665 44544332333445555555555443 34689999999999999999999999
Q ss_pred ceeEEEeccCCCC
Q 005240 626 LFCCGIARSGSYN 638 (706)
Q Consensus 626 ~~~a~v~~~~~~d 638 (706)
+++++|..++...
T Consensus 103 ~V~~lV~i~~p~~ 115 (320)
T 1ys1_X 103 LVASVTTIGTPHR 115 (320)
T ss_dssp GEEEEEEESCCTT
T ss_pred hceEEEEECCCCC
Confidence 9999999998543
No 406
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=98.45 E-value=1.2e-06 Score=89.02 Aligned_cols=120 Identities=11% Similarity=-0.061 Sum_probs=81.9
Q ss_pred CeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCC-cCCCCchHHHHHHHCCeEEEEcCCCCcCCCC
Q 005240 492 GVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNE-FSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (706)
Q Consensus 492 g~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (706)
+..+.+.++.|+.+..+. .+.||++||.... ... + ...+...|.++||.|+..+.+ |+|
T Consensus 13 ~~~l~~~i~~p~~~~~~~---~~~VvllHG~~~~-----------~~~~~---~~~l~~~L~~~G~~v~~~d~~---g~g 72 (317)
T 1tca_A 13 KSVLDAGLTCQGASPSSV---SKPILLVPGTGTT-----------GPQSF---DSNWIPLSTQLGYTPCWISPP---PFM 72 (317)
T ss_dssp HHHHHHTEEETTBCTTSC---SSEEEEECCTTCC-----------HHHHH---TTTHHHHHHTTTCEEEEECCT---TTT
T ss_pred HHHHhheeeCCCCCCCCC---CCeEEEECCCCCC-----------cchhh---HHHHHHHHHhCCCEEEEECCC---CCC
Confidence 345666788898765332 2457889995311 011 1 113456778899999987665 344
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCC---CceeEEEeccCCCC
Q 005240 571 DKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYN 638 (706)
Q Consensus 571 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~~d 638 (706)
... ......++.+.++++.++. ..+++.++||||||.++.+++.+.| ++++++|+.++...
T Consensus 73 ~~~-----~~~~~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 73 LND-----TQVNTEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp CSC-----HHHHHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred CCc-----HHHHHHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence 321 2234567777888887653 2378999999999999999988775 78999999998755
No 407
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=98.44 E-value=1.8e-06 Score=90.47 Aligned_cols=118 Identities=15% Similarity=0.039 Sum_probs=78.2
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHC---------CeEEEE
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR---------RFAVLA 560 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------G~~v~~ 560 (706)
.+|..|+...+.|.+ + ..|.||++||.+.. ...+ ......|++. ||.|++
T Consensus 75 i~g~~i~~~~~~~~~--~----~~~plll~HG~~~s-----------~~~~----~~~~~~L~~~~~~~~~~~~~~~vi~ 133 (388)
T 4i19_A 75 IDGATIHFLHVRSPE--P----DATPMVITHGWPGT-----------PVEF----LDIIGPLTDPRAHGGDPADAFHLVI 133 (388)
T ss_dssp ETTEEEEEEEECCSS--T----TCEEEEEECCTTCC-----------GGGG----HHHHHHHHCGGGGTSCGGGCEEEEE
T ss_pred ECCeEEEEEEccCCC--C----CCCeEEEECCCCCC-----------HHHH----HHHHHHHhCcccccCCCCCCeEEEE
Confidence 389999988776653 1 13668889996521 1111 1334555554 999999
Q ss_pred cCCCCcCCCCCCCCch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 561 GPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 561 ~~~~~~~g~g~~~~~~---~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
++.+ |+|.+.... .......+|+...++.+ ..+++.++||||||.+++.++.++|+++++++..++..
T Consensus 134 ~dl~---G~G~S~~~~~~~~~~~~~a~~~~~l~~~l------g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 134 PSLP---GFGLSGPLKSAGWELGRIAMAWSKLMASL------GYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp ECCT---TSGGGCCCSSCCCCHHHHHHHHHHHHHHT------TCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred EcCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 6665 444443321 12344455554444432 33689999999999999999999999999999998643
No 408
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.44 E-value=3.6e-05 Score=78.15 Aligned_cols=180 Identities=12% Similarity=0.054 Sum_probs=116.1
Q ss_pred ceeEEEEEcCCCc--eeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccc
Q 005240 61 KLRVWIADAETGE--AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (706)
Q Consensus 61 ~~~l~~~d~~~g~--~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (706)
..+|..++++++. ...+..... ....+.|.+.+..||++-.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~-----~~~~ld~d~~~~~lyw~D~-------------------------------- 54 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLE-----DAAAVDFVFSHGLIYWSDV-------------------------------- 54 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEE-----EEEEEEEEGGGTEEEEEET--------------------------------
T ss_pred cCeEEEEECCCCceEEEEEecCCC-----ccEEEEEEeCCCEEEEEEC--------------------------------
Confidence 3789999998763 222211111 1346789998878887621
Q ss_pred hhccCCchhhhhhhhcccceEEEEccCCC--ce-ecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEE
Q 005240 139 DNLLKDEYDESLFDYYTTAQLVLGSLDGT--AK-DFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (706)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~~l~g~--~~-~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~ 214 (706)
....|++++++|. .+ .+... .....+++.+.+..|+++... ...|.++
T Consensus 55 ----------------~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~------------~~~I~~~ 106 (318)
T 3sov_A 55 ----------------SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE------------TNRIEVS 106 (318)
T ss_dssp ----------------TTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred ----------------CCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECC------------CCEEEEE
Confidence 1257888988663 12 22222 455678888888899887643 2489999
Q ss_pred ecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEE
Q 005240 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (706)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 294 (706)
++++...+.+..... ..+..++..|.+.. |||.... ....|++++. ++...+.+
T Consensus 107 ~~dG~~~~~l~~~~~------------~~P~giavdp~~g~-ly~td~~----------~~~~I~r~~~---dG~~~~~~ 160 (318)
T 3sov_A 107 NLDGSLRKVLFWQEL------------DQPRAIALDPSSGF-MYWTDWG----------EVPKIERAGM---DGSSRFII 160 (318)
T ss_dssp ETTSCSCEEEECSSC------------SSEEEEEEEGGGTE-EEEEECS----------SSCEEEEEET---TSCSCEEE
T ss_pred ECCCCcEEEEEeCCC------------CCccEEEEeCCCCE-EEEEecC----------CCCEEEEEEc---CCCCeEEE
Confidence 999876666643221 12447788887766 8776311 1235888888 56555555
Q ss_pred eec-ccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 295 HKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 295 ~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
... -.....++|++++..|+++.. ...+|+++|+++.
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD~---~~~~I~~~d~dG~ 198 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWADA---KLNFIHKSNLDGT 198 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC
T ss_pred EECCCCCccEEEEeccCCEEEEEEC---CCCEEEEEcCCCC
Confidence 432 334567899999988998742 3457999999873
No 409
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.44 E-value=1.8e-05 Score=79.98 Aligned_cols=246 Identities=11% Similarity=0.066 Sum_probs=126.9
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecC-CcEEEEEecCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN-STLLIFTIPSSRR 110 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpD-g~~l~~~~~~~~~ 110 (706)
....++|+|||+ |+++.... .........|+++++++++.+.+...........+..+.+++| |+ |++...
T Consensus 19 ~~~~~~~~~~g~-l~~~~~~~--~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~---- 90 (314)
T 1pjx_A 19 GAEGPVFDKNGD-FYIVAPEV--EVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADM---- 90 (314)
T ss_dssp TCEEEEECTTSC-EEEEETTC--EETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEET----
T ss_pred CccCceECCCCC-EEEEEecc--ccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEEC----
Confidence 456899999995 54541000 0000223579999988888776643100001112567889999 66 444321
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCCceec-CCC------ceEeeeeeC
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDF-GTP------AVYTAVEPS 183 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~~~~l-t~~------~~~~~~~~S 183 (706)
...|++++.+|+.+.+ ... ..+..++++
T Consensus 91 ---------------------------------------------~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d 125 (314)
T 1pjx_A 91 ---------------------------------------------RLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFD 125 (314)
T ss_dssp ---------------------------------------------TTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEEC
T ss_pred ---------------------------------------------CCCEEEEeCCCCEEEEEeccCCCccccCCcCEEEC
Confidence 1367778777655544 221 246688999
Q ss_pred CCCcEEEEEeeccCc---ccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeee----cCCCce
Q 005240 184 PDQKYVLITSMHRPY---SYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWR----ADKPST 256 (706)
Q Consensus 184 pDG~~i~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~s----pdg~~~ 256 (706)
|||+ |+++...... .+..........|++++.+ ++.+.+.... ..+..+.|+ |||+.
T Consensus 126 ~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------~~~~~i~~~~~~d~dg~~- 189 (314)
T 1pjx_A 126 YEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF-------------QFPNGIAVRHMNDGRPYQ- 189 (314)
T ss_dssp TTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE-------------SSEEEEEEEECTTSCEEE-
T ss_pred CCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC-------------CCcceEEEecccCCCCCE-
Confidence 9996 4454432100 0000000112478888877 4444432211 112367899 99875
Q ss_pred EEEEEeccCCCCccccCccceeeeecCCCCCCCCce---EEeecc----cccccceecCCCceEEEEeeccccceEEEEE
Q 005240 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE---ILHKLD----LRFRSVSWCDDSLALVNETWYKTSQTRTWLV 329 (706)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~---~l~~~~----~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~ 329 (706)
|++.. .. ...|++++.+ ..++.. .+.... .....+.+++||..++... ....|+++
T Consensus 190 l~v~~-~~----------~~~i~~~~~~--~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~----~~~~i~~~ 252 (314)
T 1pjx_A 190 LIVAE-TP----------TKKLWSYDIK--GPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW----GSSHIEVF 252 (314)
T ss_dssp EEEEE-TT----------TTEEEEEEEE--ETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE----TTTEEEEE
T ss_pred EEEEE-CC----------CCeEEEEECC--CCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc----CCCEEEEE
Confidence 65542 11 1246777751 123221 111111 3456678999997444322 23368999
Q ss_pred cCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 330 CPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 330 d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
|+++++ .......... ....+.+++||++|++..
T Consensus 253 d~~~g~--~~~~~~~~~~------~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 253 GPDGGQ--PKMRIRCPFE------KPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp CTTCBS--CSEEEECSSS------CEEEEEECTTSSEEEEEE
T ss_pred cCCCCc--EeEEEeCCCC------CceeEEECCCCCEEEEEe
Confidence 988532 2211111101 112356789998777764
No 410
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.44 E-value=1.1e-06 Score=92.69 Aligned_cols=88 Identities=18% Similarity=0.191 Sum_probs=65.8
Q ss_pred HHHHHH-CCeEEEEcCCCCcCCCCCCCCch--h----------hHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEEechHH
Q 005240 548 SLIFLA-RRFAVLAGPSIPIIGEGDKLPND--R----------FVEQLVSSAEAAVEEVVRRG-VADPSRIAVGGHSYGA 613 (706)
Q Consensus 548 ~~~l~~-~G~~v~~~~~~~~~g~g~~~~~~--~----------~~~~~~~D~~~~~~~l~~~~-~id~~~i~i~G~S~GG 613 (706)
...+++ .|+.|+..+. +|+|++.... . ..++.++|+...++++..+. .....++.++||||||
T Consensus 61 ~~~lA~~~~~~Vi~~Dh---Rg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG 137 (446)
T 3n2z_B 61 MWDVAEELKAMLVFAEH---RYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGG 137 (446)
T ss_dssp HHHHHHHHTEEEEEECC---TTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHH
T ss_pred HHHHHHHhCCcEEEEec---CCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHH
Confidence 344554 6889988444 4677774321 1 25678999999999998752 2233689999999999
Q ss_pred HHHHHHHHhCCCceeEEEeccCCCC
Q 005240 614 FMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 614 ~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
.+|++++.++|+++.++|+.++...
T Consensus 138 ~lA~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 138 MLAAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHHHhhhccccEEEEeccchh
Confidence 9999999999999999998765433
No 411
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=98.43 E-value=1.1e-06 Score=94.46 Aligned_cols=81 Identities=16% Similarity=0.151 Sum_probs=60.1
Q ss_pred HHHCCeEEEEcCCCCcCCCCCCCC-------c----------hhhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEEEechH
Q 005240 551 FLARRFAVLAGPSIPIIGEGDKLP-------N----------DRFVEQLVSSAEAAVEEVVRRGVADPSR-IAVGGHSYG 612 (706)
Q Consensus 551 l~~~G~~v~~~~~~~~~g~g~~~~-------~----------~~~~~~~~~D~~~~~~~l~~~~~id~~~-i~i~G~S~G 612 (706)
|++.||.|++.+.+|. |+|.+.. . ....++.++|+.++++.+ ..++ +.++|||||
T Consensus 138 L~~~~~~Vi~~D~~G~-~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~l------~~~~~~~lvGhSmG 210 (444)
T 2vat_A 138 FDTSRYFIICLNYLGS-PFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRL------GVRQIAAVVGASMG 210 (444)
T ss_dssp BCTTTCEEEEECCTTC-SSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHH------TCCCEEEEEEETHH
T ss_pred hhccCCEEEEecCCCC-CCCCCCCCCCCcccccccccccccccccHHHHHHHHHHHHHhc------CCccceEEEEECHH
Confidence 4578999999777753 2444321 0 123556677777777665 2357 999999999
Q ss_pred HHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 613 AFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 613 G~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
|++++.++.++|++++++|+.++...
T Consensus 211 G~ial~~A~~~p~~v~~lVli~~~~~ 236 (444)
T 2vat_A 211 GMHTLEWAFFGPEYVRKIVPIATSCR 236 (444)
T ss_dssp HHHHHHHGGGCTTTBCCEEEESCCSB
T ss_pred HHHHHHHHHhChHhhheEEEEecccc
Confidence 99999999999999999999987643
No 412
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.42 E-value=7.1e-06 Score=88.35 Aligned_cols=263 Identities=13% Similarity=-0.008 Sum_probs=133.9
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceee-C-CCCCeEEEEeec-----cc----cccccCCceeEEEEEcCCCc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSW-S-PDGKRIAFSVRV-----DE----EDNVSSCKLRVWIADAETGE 73 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~-S-PDG~~laf~~~~-----~~----~~~~~~~~~~l~~~d~~~g~ 73 (706)
+.|.+.|++. .+..+|..+|.+......++ + |||++|+..... ++ .+. ......+-++|.++.+
T Consensus 112 ~rVavIdl~t----~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~-~~~~~~vtvID~~t~~ 186 (595)
T 1fwx_A 112 TRVARVRCDV----MKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV-ANYVNVFTAVDADKWE 186 (595)
T ss_dssp TEEEEEETTT----TEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG-GGEEEEEEEEETTTTE
T ss_pred CEEEEEECCC----ceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccc-cccCceEEEEECCCCe
Confidence 3478888877 77777777887777777777 6 999999444210 00 011 1344678899999875
Q ss_pred e-eecccCCCccccccccceEEecCCcEEEEEecCCCC-CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhh
Q 005240 74 A-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR-DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLF 151 (706)
Q Consensus 74 ~-~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 151 (706)
. .++.-+. . ......||||+++++++..... .............+. ........ ....++..
T Consensus 187 v~~qI~Vgg-~-----pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~------V~~~~~~~---~~v~~Gk~- 250 (595)
T 1fwx_A 187 VAWQVLVSG-N-----LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIV------VFNIAEIE---KAIAAGDY- 250 (595)
T ss_dssp EEEEEEESS-C-----CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEE------EEEHHHHH---HHHHHTCS-
T ss_pred EEEEEEeCC-C-----ccceEECCCCCEEEEEecCcccCcchhhccccccceEE------Eeecccee---EeccCCCe-
Confidence 4 3342112 2 5677899999998877643211 100000000000000 00000000 00011110
Q ss_pred hhcccceEEEEcc-C--C-C-ceecCCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEccc
Q 005240 152 DYYTTAQLVLGSL-D--G-T-AKDFGTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCD 226 (706)
Q Consensus 152 ~~~~~~~l~~~~l-~--g-~-~~~lt~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 226 (706)
.+ -+.+-++|. + + . ...+..+....++.+||||++++.+... ...+.++|+++.+. +.+
T Consensus 251 ~~--i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~------------s~~VsVid~~~~~~--~~~ 314 (595)
T 1fwx_A 251 QE--LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL------------SPTVTVLDVTRFDA--VFY 314 (595)
T ss_dssp EE--ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT------------SSBEEEEEGGGHHH--HHH
T ss_pred eE--ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC------------CCeEEEEECccccc--ccc
Confidence 11 145778887 3 3 2 2344444566789999999999876554 35889999884320 000
Q ss_pred CCCCCCC-CcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCC----CCCCC-ceEEeec--c
Q 005240 227 LPPAEDI-PVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEP----AEGEK-PEILHKL--D 298 (706)
Q Consensus 227 ~~~~~~~-p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~----~~~~~-~~~l~~~--~ 298 (706)
+...... .........|++.++|+||| . +|.+...++ .+..||++. +.|.+ ...+... .
T Consensus 315 ~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~-aY~t~~lds-----------qV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 315 ENADPRSAVVAEPELGLGPLHTAFDGRG-N-AYTSLFLDS-----------QVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp SCCCGGGGEEECCBCCSCEEEEEECTTS-E-EEEEETTTT-----------EEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred cccCcccceEEEcCCCCCcceEEECCCC-e-EEEEEecCC-----------cEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 0000000 00000111456788999999 5 665543322 355566621 00111 1222221 1
Q ss_pred cc------cccceecCCCceEEEEe
Q 005240 299 LR------FRSVSWCDDSLALVNET 317 (706)
Q Consensus 299 ~~------~~~~~wspDg~~l~~~~ 317 (706)
.. -.....+|||++|+...
T Consensus 382 yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 382 YQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp SCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred cccccceeccceEeCCCCCEEEEcC
Confidence 11 13446799999998753
No 413
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.41 E-value=3.8e-05 Score=77.64 Aligned_cols=238 Identities=10% Similarity=0.079 Sum_probs=131.0
Q ss_pred ceeEeecCCCCCCCCeeeeecCC----CCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeec-ccC
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYP----DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPL-FES 80 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~----~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-t~~ 80 (706)
.|++.++.. |+.+.+.. + .......+.++||+..|+.+. . ...|++++.+ ++.+.+ ...
T Consensus 47 ~i~~~d~~~----g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~---------~-~~~l~~~d~~-g~~~~~~~~~ 110 (314)
T 1pjx_A 47 EILRIDLKT----GKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVAD---------M-RLGLLVVQTD-GTFEEIAKKD 110 (314)
T ss_dssp EEEEECTTT----CCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEE---------T-TTEEEEEETT-SCEEECCSBC
T ss_pred EEEEEeCCC----CcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEE---------C-CCCEEEEeCC-CCEEEEEecc
Confidence 456665544 77666542 1 112466788999933443432 1 2379999998 777666 422
Q ss_pred CCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEE
Q 005240 81 PDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLV 160 (706)
Q Consensus 81 ~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~ 160 (706)
........+..+.+++||+. ++......... . . +.. ........|+
T Consensus 111 ~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~~~--~-~--------------------~~~----------~~~~~~~~l~ 156 (314)
T 1pjx_A 111 SEGRRMQGCNDCAFDYEGNL-WITAPAGEVAP--A-D--------------------YTR----------SMQEKFGSIY 156 (314)
T ss_dssp TTSCBCBCCCEEEECTTSCE-EEEECBCBCTT--S-C--------------------CCB----------TTSSSCEEEE
T ss_pred CCCccccCCcCEEECCCCCE-EEEecCccccc--c-c--------------------ccc----------cccCCCCeEE
Confidence 11100112567899999975 44432110000 0 0 000 0000236799
Q ss_pred EEccCCCceecCCC-ceEeeeeeC----CCCcEEEEEeeccCcccccccccccceEEEEecC-CCeeE---EcccCCCCC
Q 005240 161 LGSLDGTAKDFGTP-AVYTAVEPS----PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVR---ELCDLPPAE 231 (706)
Q Consensus 161 ~~~l~g~~~~lt~~-~~~~~~~~S----pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~---~l~~~~~~~ 231 (706)
+++.+|+...+... .....++|+ |||+.|++..... ..|++|+++ .+... .+.......
T Consensus 157 ~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~------------~~i~~~~~~~~g~~~~~~~~~~~~~~~ 224 (314)
T 1pjx_A 157 CFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT------------KKLWSYDIKGPAKIENKKVWGHIPGTH 224 (314)
T ss_dssp EECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT------------TEEEEEEEEETTEEEEEEEEEECCCCS
T ss_pred EECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECCC------------CeEEEEECCCCCccccceEEEECCCCC
Confidence 99887765554333 445678899 9999887765432 478888876 33321 111111110
Q ss_pred CCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEeecccccccceecCCC
Q 005240 232 DIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDS 310 (706)
Q Consensus 232 ~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~wspDg 310 (706)
. ..+..+.++++|+ |++.... ...|+++|. ++++. ..+.........+.++|||
T Consensus 225 --~-------~~p~~i~~d~~G~--l~v~~~~-----------~~~i~~~d~---~~g~~~~~~~~~~~~~~~i~~~~dg 279 (314)
T 1pjx_A 225 --E-------GGADGMDFDEDNN--LLVANWG-----------SSHIEVFGP---DGGQPKMRIRCPFEKPSNLHFKPQT 279 (314)
T ss_dssp --S-------CEEEEEEEBTTCC--EEEEEET-----------TTEEEEECT---TCBSCSEEEECSSSCEEEEEECTTS
T ss_pred --C-------CCCCceEECCCCC--EEEEEcC-----------CCEEEEEcC---CCCcEeEEEeCCCCCceeEEECCCC
Confidence 0 1133678899986 5544211 124778887 53443 3343333566788899999
Q ss_pred ceEEEEeeccccceEEEEEcCCC
Q 005240 311 LALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 311 ~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
+.|++.... ...|++++++.
T Consensus 280 ~~l~v~~~~---~~~l~~~~~~~ 299 (314)
T 1pjx_A 280 KTIFVTEHE---NNAVWKFEWQR 299 (314)
T ss_dssp SEEEEEETT---TTEEEEEECSS
T ss_pred CEEEEEeCC---CCeEEEEeCCC
Confidence 877765422 23688888775
No 414
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=98.41 E-value=9.9e-07 Score=88.27 Aligned_cols=76 Identities=9% Similarity=0.083 Sum_probs=57.4
Q ss_pred HCCeEEEEcCCCCcCCCCCCCCch---hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeE
Q 005240 553 ARRFAVLAGPSIPIIGEGDKLPND---RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (706)
Q Consensus 553 ~~G~~v~~~~~~~~~g~g~~~~~~---~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a 629 (706)
+.+|.|+.++.+ |+|.+.... ...+...+|+.+.++.+ ..+++.++||||||.+++.++.++|+++++
T Consensus 52 ~~~~~vi~~Dl~---G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~ 122 (282)
T 1iup_A 52 SKFYRVIAPDMV---GFGFTDRPENYNYSKDSWVDHIIGIMDAL------EIEKAHIVGNAFGGGLAIATALRYSERVDR 122 (282)
T ss_dssp TTTSEEEEECCT---TSTTSCCCTTCCCCHHHHHHHHHHHHHHT------TCCSEEEEEETHHHHHHHHHHHHSGGGEEE
T ss_pred ccCCEEEEECCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHChHHHHH
Confidence 679999996655 556554321 23556677777766654 236899999999999999999999999999
Q ss_pred EEeccCCC
Q 005240 630 GIARSGSY 637 (706)
Q Consensus 630 ~v~~~~~~ 637 (706)
+|+.++..
T Consensus 123 lvl~~~~~ 130 (282)
T 1iup_A 123 MVLMGAAG 130 (282)
T ss_dssp EEEESCCC
T ss_pred HHeeCCcc
Confidence 99988643
No 415
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.40 E-value=1.6e-05 Score=80.01 Aligned_cols=145 Identities=10% Similarity=-0.041 Sum_probs=72.8
Q ss_pred ceEEEEcc-CCC-ceecCCC----ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCC
Q 005240 157 AQLVLGSL-DGT-AKDFGTP----AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPA 230 (706)
Q Consensus 157 ~~l~~~~l-~g~-~~~lt~~----~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~ 230 (706)
..|.++|+ +|+ .+.+..+ ..+...+|||||+.++..+..... ...........+.+|++.+++..........
T Consensus 203 ~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~-w~laSGs~D~tIklWd~~tgk~l~v~~~~~p 281 (356)
T 2w18_A 203 NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK-ESESLRSPVFQLIVINPKTTLSVGVMLYCLP 281 (356)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-------------CCEEEEEEETTTTEEEEEEEECCC
T ss_pred CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCc-ceeeccCCCcEEEEEECCCCEEEEEEEeecc
Confidence 67888899 675 4555433 234456899999998765532110 0001112236888999987764332110000
Q ss_pred CCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEeeccccc-ccceecC
Q 005240 231 EDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRF-RSVSWCD 308 (706)
Q Consensus 231 ~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~-~~~~wsp 308 (706)
+.. . ...+..+.++.. ++ ... ....|.+||+ .+++. ..|..+...+ ..++|||
T Consensus 282 ~Gh--------~-~~~lsg~~sg~~-lA-SgS-----------~DgTIkIWDl---~tGk~l~tL~gH~~~vvs~vafSP 336 (356)
T 2w18_A 282 PGQ--------A-GRFLEGDVKDHC-AA-AIL-----------TSGTIAIWDL---LLGQCTALLPPVSDQHWSFVKWSG 336 (356)
T ss_dssp TTC--------C-CCEEEEEEETTE-EE-EEE-----------TTSCEEEEET---TTCSEEEEECCC--CCCCEEEECS
T ss_pred CCC--------c-ceeEccccCCCE-EE-EEc-----------CCCcEEEEEC---CCCcEEEEecCCCCCeEEEEEECC
Confidence 000 0 001111112222 22 111 1125889999 56654 3455444433 4589999
Q ss_pred CCceEEEEeeccccceEEEEE
Q 005240 309 DSLALVNETWYKTSQTRTWLV 329 (706)
Q Consensus 309 Dg~~l~~~~~~~~~~~~l~~~ 329 (706)
||+.|+..+. ++..+||.+
T Consensus 337 DG~~LaSGS~--D~TIklWd~ 355 (356)
T 2w18_A 337 TDSHLLAGQK--DGNIFVYHY 355 (356)
T ss_dssp SSSEEEEECT--TSCEEEEEE
T ss_pred CCCEEEEEEC--CCcEEEecC
Confidence 9999987653 355666653
No 416
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.40 E-value=7.3e-06 Score=92.72 Aligned_cols=179 Identities=12% Similarity=-0.049 Sum_probs=113.5
Q ss_pred eeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhc
Q 005240 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (706)
Q Consensus 62 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (706)
..|+++++++++...+...... +..++|++++..||++-.
T Consensus 386 ~~I~~id~~~~~~~~~~~~~~~-----p~gla~d~~~~~Ly~sD~----------------------------------- 425 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL----------------------------------- 425 (699)
T ss_dssp TC-CEECTTSCCEECCSCCCTT-----CCCCEEETTTTEEEECCT-----------------------------------
T ss_pred cceEEEeCCCCcceeeeccCcc-----eEEEccccccCeEEEEec-----------------------------------
Confidence 5788889888877666433222 567899998888877521
Q ss_pred cCCchhhhhhhhcccceEEEEccCC-----CceecC-CC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEE
Q 005240 142 LKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (706)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~~l~g-----~~~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~ 214 (706)
....|++++++| ....+. .. .....+++.+.++.|+++... ...|+++
T Consensus 426 -------------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~------------~~~I~v~ 480 (699)
T 1n7d_A 426 -------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSVA 480 (699)
T ss_dssp -------------TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTT------------TSCEEEE
T ss_pred -------------CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEecc------------CCeEEEE
Confidence 114677777754 222222 22 345678888888888775433 2479999
Q ss_pred ecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEE
Q 005240 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (706)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 294 (706)
+++++..+.+..... ..+..+++.|++.. |||... +. ...|+++++ ++...+.+
T Consensus 481 d~dg~~~~~l~~~~~------------~~P~giavDp~~g~-ly~td~---~~-------~~~I~~~~~---dG~~~~~l 534 (699)
T 1n7d_A 481 DTKGVKRKTLFREQG------------SKPRAIVVDPVHGF-MYWTDW---GT-------PAKIKKGGL---NGVDIYSL 534 (699)
T ss_dssp BSSSCCEEEECCCSS------------CCCCCEECCSSSSC-CEECCC---SS-------SCCEEBCCS---SSCCCCEE
T ss_pred ecCCCceEEEEeCCC------------CCcceEEEccCCCc-EEEccc---CC-------CCeEEEEeC---CCCCeeEE
Confidence 999887766644321 12447789998776 776631 11 135788877 55555555
Q ss_pred eec-ccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 295 HKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 295 ~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
... -.....++|+|++..|+++.. ...+|+++++++.
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~---~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGG 572 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEET---TTTEEEEECSSSS
T ss_pred EeCCCCCccEEEEeccCCEEEEEec---CCCeEEEEccCCC
Confidence 332 334567899999988988642 3457999999873
No 417
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=98.40 E-value=9.4e-07 Score=89.27 Aligned_cols=101 Identities=13% Similarity=-0.033 Sum_probs=69.7
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHC--CeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR--RFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAV 590 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~ 590 (706)
.|.||++||.+.. ...+ ...+..|++. ||.|+..+.+ |+|.+.... ...++|+.+.+
T Consensus 36 ~~~vvllHG~~~~-----------~~~~----~~~~~~L~~~~~g~~vi~~D~~---G~G~s~~~~---~~~~~~~~~~l 94 (302)
T 1pja_A 36 YKPVIVVHGLFDS-----------SYSF----RHLLEYINETHPGTVVTVLDLF---DGRESLRPL---WEQVQGFREAV 94 (302)
T ss_dssp CCCEEEECCTTCC-----------GGGG----HHHHHHHHHHSTTCCEEECCSS---CSGGGGSCH---HHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-----------hhHH----HHHHHHHHhcCCCcEEEEeccC---CCccchhhH---HHHHHHHHHHH
Confidence 3678889995321 1111 2355677877 9999996665 445443322 13455555555
Q ss_pred HHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC-ceeEEEeccCCC
Q 005240 591 EEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-LFCCGIARSGSY 637 (706)
Q Consensus 591 ~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~-~~~a~v~~~~~~ 637 (706)
..+.+.. ..++.++||||||.+++.++.++|+ +++++|+.++..
T Consensus 95 ~~~~~~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 139 (302)
T 1pja_A 95 VPIMAKA---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 139 (302)
T ss_dssp HHHHHHC---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred HHHhhcC---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCc
Confidence 5555543 3789999999999999999999999 799999988754
No 418
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=98.40 E-value=2.2e-06 Score=87.28 Aligned_cols=112 Identities=13% Similarity=0.032 Sum_probs=75.3
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEG 570 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g 570 (706)
+|..+.....-+ ++.|.||++||.+.. ...|. .....|+ ..|.|++++-+ |+|
T Consensus 15 ~g~~l~y~~~G~--------g~~~pvvllHG~~~~-----------~~~w~----~~~~~L~-~~~~via~Dl~---G~G 67 (316)
T 3afi_E 15 LGSSMAYRETGA--------QDAPVVLFLHGNPTS-----------SHIWR----NILPLVS-PVAHCIAPDLI---GFG 67 (316)
T ss_dssp TTEEEEEEEESC--------TTSCEEEEECCTTCC-----------GGGGT----TTHHHHT-TTSEEEEECCT---TST
T ss_pred CCEEEEEEEeCC--------CCCCeEEEECCCCCc-----------hHHHH----HHHHHHh-hCCEEEEECCC---CCC
Confidence 677777655422 123478899997521 11221 2344454 45999985554 566
Q ss_pred CCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 571 DKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 571 ~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
.+... ....+...+|+.+.++.+ +-+++.++||||||.+++.++.++|++++++|..++
T Consensus 68 ~S~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 128 (316)
T 3afi_E 68 QSGKPDIAYRFFDHVRYLDAFIEQR------GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEF 128 (316)
T ss_dssp TSCCCSSCCCHHHHHHHHHHHHHHT------TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHc------CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeecc
Confidence 65432 223566677777766654 236899999999999999999999999999998875
No 419
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.40 E-value=4.8e-05 Score=86.56 Aligned_cols=179 Identities=12% Similarity=-0.036 Sum_probs=118.4
Q ss_pred eeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhc
Q 005240 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (706)
Q Consensus 62 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (706)
..|..+++++++..++...... +..++|.+.+..||++-.
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~~~~-----~~gl~~d~~~~~lY~sD~----------------------------------- 443 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPNLRN-----VVALDTEVASNRIYWSDL----------------------------------- 443 (791)
T ss_dssp SSEEEECTTSCCCEEEECSCSS-----EEEEEEETTTTEEEEEET-----------------------------------
T ss_pred cceeEeeccCCcceeeecCCCc-----eEEEeecccCCeeEEeec-----------------------------------
Confidence 5688888887776666533222 557788887777777631
Q ss_pred cCCchhhhhhhhcccceEEEEccCC-----CceecCC-C-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEE
Q 005240 142 LKDEYDESLFDYYTTAQLVLGSLDG-----TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (706)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~~l~g-----~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~ 214 (706)
....|++++++| ....+.. . .....+++.+.++.||++... ...|+++
T Consensus 444 -------------~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~------------~~~I~v~ 498 (791)
T 3m0c_C 444 -------------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV------------LGTVSVA 498 (791)
T ss_dssp -------------TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred -------------cceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecC------------CCeEEEE
Confidence 125788888865 2233322 3 456788999999999887654 2589999
Q ss_pred ecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEE
Q 005240 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (706)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 294 (706)
+++|+..+.|..... ..++.++..|.+.. |||... +. ...|+++++ +|...+.|
T Consensus 499 ~ldG~~~~~l~~~~l------------~~P~gIaVDp~~g~-LYwtD~---g~-------~~~I~~~~~---dG~~~~~l 552 (791)
T 3m0c_C 499 DTKGVKRKTLFRENG------------SKPRAIVVDPVHGF-MYWTDW---GT-------PAKIKKGGL---NGVDIYSL 552 (791)
T ss_dssp ETTSSSEEEEEECTT------------CCEEEEEEETTTTE-EEEEEC---SS-------SCEEEEEET---TSCCEEEE
T ss_pred eCCCCeEEEEEeCCC------------CCcceEEEecCCCC-EEEecC---CC-------CCeEEEEec---CCCceEEE
Confidence 999888777754322 12457889988776 887731 11 135888888 66666666
Q ss_pred eecc-cccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 295 HKLD-LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 295 ~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
.... .....++..+++..||++.. ...+|+++++++.
T Consensus 553 v~~~l~~P~GLavD~~~~~LYwaD~---~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 553 VTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGG 590 (791)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC
T ss_pred EeCCCCCceEEEEecCCCeEEEEeC---CCCcEEEEecCCC
Confidence 5432 45567788888888888642 3457999999884
No 420
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.38 E-value=7.3e-05 Score=76.38 Aligned_cols=251 Identities=10% Similarity=0.053 Sum_probs=130.2
Q ss_pred cccceeeCCCCCeEEEEeeccccc--------------cccCCceeEEEEEcCCCceeecccCCCccccccccceEEecC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEED--------------NVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNN 97 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~--------------~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpD 97 (706)
.+..++++|||+.++......... ........|+++|.++|+..+..... .+. .+..++++||
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~--~~~-~p~gia~d~~ 101 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKN--LFY-LPHGLSIDTD 101 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTT--TCS-SEEEEEECTT
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCC--ccC-CceEEEECCC
Confidence 477889999997664432100000 00001136999999888765432111 111 2567889999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCC---ceecCC-
Q 005240 98 STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT---AKDFGT- 173 (706)
Q Consensus 98 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~---~~~lt~- 173 (706)
|+ |++... ....|++++.+|+ ...+..
T Consensus 102 g~-l~v~d~------------------------------------------------~~~~v~~~~~~g~~~~~~~~~~~ 132 (329)
T 3fvz_A 102 GN-YWVTDV------------------------------------------------ALHQVFKLDPHSKEGPLLILGRS 132 (329)
T ss_dssp SC-EEEEET------------------------------------------------TTTEEEEECTTCSSCCSEEESBT
T ss_pred CC-EEEEEC------------------------------------------------CCCEEEEEeCCCCeEEEEEeccc
Confidence 99 454421 1257888888764 223321
Q ss_pred -------C--ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCC-CCcccCccCCC
Q 005240 174 -------P--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED-IPVCYNSVREG 243 (706)
Q Consensus 174 -------~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~-~p~~~~~~~~g 243 (706)
. .....++++|++..|+++.... ...|.+|+.++...+.+........ .+..+ ..
T Consensus 133 ~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~----~~ 197 (329)
T 3fvz_A 133 MQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQF----SV 197 (329)
T ss_dssp TBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----------CCEEEEECTTSCEEEEECEECCSSSCCTTEE----SC
T ss_pred CCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----------CCeEEEEcCCCCEEEEeccCCCCCCCCCccc----CC
Confidence 1 3577899999555666655311 2479999988776665533211100 00000 12
Q ss_pred CcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-EEee--cccccccceecCCCceEEEEee--
Q 005240 244 MRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHK--LDLRFRSVSWCDDSLALVNETW-- 318 (706)
Q Consensus 244 ~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~--~~~~~~~~~wspDg~~l~~~~~-- 318 (706)
+..++++|++.. ||+. +.. ...|.+++. ++|+.. .+.. .......+.++| |..+.....
T Consensus 198 p~gia~d~~~g~-l~v~-d~~----------~~~I~~~~~---~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~ 261 (329)
T 3fvz_A 198 PHSLALVPHLDQ-LCVA-DRE----------NGRIQCFKT---DTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPY 261 (329)
T ss_dssp EEEEEEETTTTE-EEEE-ETT----------TTEEEEEET---TTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCC
T ss_pred CcEEEEECCCCE-EEEE-ECC----------CCEEEEEEC---CCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEE
Confidence 457899999655 6644 221 225778887 544443 3321 233455677888 433322110
Q ss_pred -ccccceEEEEEcCCCCCCCceeeecCcccccccCCCCCceEeccCCCEEEEee
Q 005240 319 -YKTSQTRTWLVCPGSKDVAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKI 371 (706)
Q Consensus 319 -~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 371 (706)
.......++++++.++ +....+.... .....| ..++++||| .|+++.
T Consensus 262 v~~~~~~~v~~~~~~~g--~~~~~~~~~~-~~~~~p--~~ia~~~dG-~lyvad 309 (329)
T 3fvz_A 262 FGDQEPVQGFVMNFSSG--EIIDVFKPVR-KHFDMP--HDIVASEDG-TVYIGD 309 (329)
T ss_dssp TTCSCCCCEEEEETTTC--CEEEEECCSS-SCCSSE--EEEEECTTS-EEEEEE
T ss_pred eccCCCcEEEEEEcCCC--eEEEEEcCCC-CccCCe--eEEEECCCC-CEEEEE
Confidence 0113346888887774 2333221100 000011 136678888 555554
No 421
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.38 E-value=6e-05 Score=77.06 Aligned_cols=228 Identities=11% Similarity=0.016 Sum_probs=124.5
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCC--ceeecccCC--
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG--EAKPLFESP-- 81 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g--~~~~lt~~~-- 81 (706)
.|++.+.+. |+...............++++|||+ |+++ . .....|++++.++. ....+....
T Consensus 70 ~i~~~d~~~----g~~~~~~~~~~~~~p~gia~d~~g~-l~v~-d--------~~~~~v~~~~~~g~~~~~~~~~~~~~~ 135 (329)
T 3fvz_A 70 TILVIDPNN----AEILQSSGKNLFYLPHGLSIDTDGN-YWVT-D--------VALHQVFKLDPHSKEGPLLILGRSMQP 135 (329)
T ss_dssp CEEEECTTT----CCEEEEECTTTCSSEEEEEECTTSC-EEEE-E--------TTTTEEEEECTTCSSCCSEEESBTTBC
T ss_pred cEEEEECCC----CeEEeccCCCccCCceEEEECCCCC-EEEE-E--------CCCCEEEEEeCCCCeEEEEEecccCCC
Confidence 467776655 6655443211222566789999999 5443 2 34468999998766 333332100
Q ss_pred ---CccccccccceEEec-CCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccc
Q 005240 82 ---DICLNAVFGSFVWVN-NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTA 157 (706)
Q Consensus 82 ---~~~~~~~~~~~~wSp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 157 (706)
...+. .+..++++| +|. |++.... ...
T Consensus 136 g~~~~~~~-~P~~ia~~~~~g~-lyv~d~~-----------------------------------------------~~~ 166 (329)
T 3fvz_A 136 GSDQNHFC-QPTDVAVEPSTGA-VFVSDGY-----------------------------------------------CNS 166 (329)
T ss_dssp CCSTTCCS-SEEEEEECTTTCC-EEEEECS-----------------------------------------------SCC
T ss_pred CCCccccC-CCcEEEEeCCCCe-EEEEeCC-----------------------------------------------CCC
Confidence 00011 145788999 666 4444210 114
Q ss_pred eEEEEccCCCce-ecCC---------C--ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC-CCeeEEc
Q 005240 158 QLVLGSLDGTAK-DFGT---------P--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD-GKLVREL 224 (706)
Q Consensus 158 ~l~~~~l~g~~~-~lt~---------~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l 224 (706)
.|++++.+|+.. .+.. . .....++++||+..|+++... ...|.+|+.+ ++.++.+
T Consensus 167 ~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~------------~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 167 RIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE------------NGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT------------TTEEEEEETTTCCEEEEE
T ss_pred eEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC------------CCEEEEEECCCCcEEEEE
Confidence 666777666332 2211 1 246789999997788766543 2489999998 5555554
Q ss_pred ccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEe----ecccc
Q 005240 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH----KLDLR 300 (706)
Q Consensus 225 ~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~----~~~~~ 300 (706)
...... .++..+.++| + +++..+- ...........+++++. .+++..... .....
T Consensus 235 ~~~~~~-----------~~~~~~~~~p-g---~~~~~~g---~~~v~~~~~~~v~~~~~---~~g~~~~~~~~~~~~~~~ 293 (329)
T 3fvz_A 235 KHASFG-----------RNVFAISYIP-G---FLFAVNG---KPYFGDQEPVQGFVMNF---SSGEIIDVFKPVRKHFDM 293 (329)
T ss_dssp CCTTTT-----------TCEEEEEEET-T---EEEEEEC---CCCTTCSCCCCEEEEET---TTCCEEEEECCSSSCCSS
T ss_pred eccccC-----------CCcceeeecC-C---EEEEeCC---CEEeccCCCcEEEEEEc---CCCeEEEEEcCCCCccCC
Confidence 322111 1234678888 3 3333321 11111123346888887 455544432 12234
Q ss_pred cccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 301 FRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 301 ~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
...++++||| .|+++. . ...+|+++++++
T Consensus 294 p~~ia~~~dG-~lyvad-~--~~~~I~~~~~~~ 322 (329)
T 3fvz_A 294 PHDIVASEDG-TVYIGD-A--HTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEECTTS-EEEEEE-S--SSCCEEEEEEEE
T ss_pred eeEEEECCCC-CEEEEE-C--CCCEEEEEeCCc
Confidence 5678899999 455443 2 234577777655
No 422
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=98.37 E-value=9.3e-07 Score=87.48 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=62.2
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCch-hhHHHHHHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPND-RFVEQLVSSAEAAVEE 592 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~-~~~~~~~~D~~~~~~~ 592 (706)
|.||++||.+.. ...| ...+..|++.||.|+..+.+ |+|.+.... ...+...+|+.+.+
T Consensus 17 ~~vvllHG~~~~-----------~~~w----~~~~~~L~~~~~~vi~~Dl~---GhG~S~~~~~~~~~~~a~~l~~~l-- 76 (264)
T 1r3d_A 17 PLVVLVHGLLGS-----------GADW----QPVLSHLARTQCAALTLDLP---GHGTNPERHCDNFAEAVEMIEQTV-- 76 (264)
T ss_dssp CEEEEECCTTCC-----------GGGG----HHHHHHHTTSSCEEEEECCT---TCSSCC-------CHHHHHHHHHH--
T ss_pred CcEEEEcCCCCC-----------HHHH----HHHHHHhcccCceEEEecCC---CCCCCCCCCccCHHHHHHHHHHHH--
Confidence 678999996321 1111 13345565589999996554 566554321 11233344444433
Q ss_pred HHHcCCCCCCcEEEEEechHHHHHHH---HHHhCCCceeEEEeccCC
Q 005240 593 VVRRGVADPSRIAVGGHSYGAFMTAH---LLAHAPHLFCCGIARSGS 636 (706)
Q Consensus 593 l~~~~~id~~~i~i~G~S~GG~~a~~---~~~~~p~~~~a~v~~~~~ 636 (706)
+.-.+++.++.++||||||.+++. ++.++|++++++|..++.
T Consensus 77 --~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~ 121 (264)
T 1r3d_A 77 --QAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGH 121 (264)
T ss_dssp --HTTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCC
T ss_pred --HHhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCC
Confidence 322232224999999999999999 788899999999987653
No 423
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.37 E-value=8.4e-05 Score=78.14 Aligned_cols=221 Identities=10% Similarity=0.043 Sum_probs=133.8
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCC----ceeecccCC
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----EAKPLFESP 81 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g----~~~~lt~~~ 81 (706)
.|...+++. ...+.+. +.......+.|++.+.+|+++. .....|+.+++++. ....+....
T Consensus 93 ~I~~i~l~~----~~~~~~~--~~~~~~~~l~~d~~~~~lywsD---------~~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 93 EVRKMTLDR----SEYTSLI--PNLRNVVALDTEVASNRIYWSD---------LSQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp EEEEECTTS----CSCEEEE--CSCSCEEEEEEETTTTEEEEEE---------TTTTEEEEEEC------CCCEEEECSS
T ss_pred eeEEEccCC----cceeEec--cccCcceEEeeeeccCceEEEe---------cCCCeEEEEEcccCCCCCcceEEEeCC
Confidence 444444543 4444443 2334567889999999998864 23468999998762 333332211
Q ss_pred CccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEE
Q 005240 82 DICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVL 161 (706)
Q Consensus 82 ~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~ 161 (706)
. . ....++..+.++.||+.-. ....|.+
T Consensus 158 ~---~-~p~glavD~~~~~lY~~d~------------------------------------------------~~~~I~~ 185 (400)
T 3p5b_L 158 I---Q-APDGLAVDWIHSNIYWTDS------------------------------------------------VLGTVSV 185 (400)
T ss_dssp C---S-CEEEEEEETTTTEEEEEET------------------------------------------------TTTEEEE
T ss_pred C---C-CcccEEEEecCCceEEEEC------------------------------------------------CCCeEEE
Confidence 1 1 1456777776777777621 1257899
Q ss_pred EccCC-CceecCC-C-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccC
Q 005240 162 GSLDG-TAKDFGT-P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYN 238 (706)
Q Consensus 162 ~~l~g-~~~~lt~-~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~ 238 (706)
++++| ..+.+.. . .....+++.|.+.+|+++.... ...|++++++|...+.+.....
T Consensus 186 ~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~-----------~~~I~~~~~dG~~~~~~~~~~l--------- 245 (400)
T 3p5b_L 186 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENI--------- 245 (400)
T ss_dssp ECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS-----------SCCEEEEETTSCSCEEEECSSC---------
T ss_pred EeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC-----------CCEEEEEeCCCCccEEEEECCC---------
Confidence 99988 3343332 3 5678899999988998876432 2479999999887766644321
Q ss_pred ccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeeccccccc-ceecCCCceEEEEe
Q 005240 239 SVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRS-VSWCDDSLALVNET 317 (706)
Q Consensus 239 ~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~wspDg~~l~~~~ 317 (706)
..+..++++++++. |||+... ...|+++|. +++..+.+......... ...+-++..|+++.
T Consensus 246 ---~~P~glavd~~~~~-lY~aD~~-----------~~~I~~~d~---dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 246 ---QWPNGITLDLLSGR-LYWVDSK-----------LHSISSIDV---NGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp ---SCEEEEEEETTTTE-EEEEETT-----------TTEEEEEET---TSCCCEEEEECSSTTSSEEEEEEETTEEEEEE
T ss_pred ---CceEEEEEEeCCCE-EEEEECC-----------CCEEEEEeC---CCCccEEEEeCCCCCCCCEEEEEeCCEEEEec
Confidence 12347899998887 8887321 235888888 66666666543222221 12333555677654
Q ss_pred eccccceEEEEEcCCCC
Q 005240 318 WYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 318 ~~~~~~~~l~~~d~~~~ 334 (706)
+ ...+|+++|..++
T Consensus 308 ~---~~~~V~~~~~~~G 321 (400)
T 3p5b_L 308 I---INEAIFSANRLTG 321 (400)
T ss_dssp S---SSCSEEEEESSSC
T ss_pred C---CCCeEEEEEcCCC
Confidence 2 3345888886554
No 424
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.35 E-value=5.8e-05 Score=79.69 Aligned_cols=197 Identities=9% Similarity=-0.007 Sum_probs=106.8
Q ss_pred ceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCce-eecccCCCcc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDIC 84 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt~~~~~~ 84 (706)
.|.+.+++. ++.+.+... ..... ++|+|||+.|+.+.. .+...||+++.+++.. +.+.......
T Consensus 153 ~I~~id~~~----g~~~~~~~~--~~~~~-ia~~~~g~~l~~~d~--------~~~~~I~~~d~~~~~~~~~~g~~~~~~ 217 (409)
T 3hrp_A 153 RVRLISVDD----NKVTTVHPG--FKGGK-PAVTKDKQRVYSIGW--------EGTHTVYVYMKASGWAPTRIGQLGSTF 217 (409)
T ss_dssp EEEEEETTT----TEEEEEEET--CCBCB-CEECTTSSEEEEEBS--------STTCEEEEEEGGGTTCEEEEEECCTTS
T ss_pred cEEEEECCC----CEEEEeecc--CCCCc-eeEecCCCcEEEEec--------CCCceEEEEEcCCCceeEEeeeccchh
Confidence 345555544 655555422 22234 999999998866532 2334899999887654 3331100000
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
...+..++++|++..|++. . ....|+++++
T Consensus 218 -~~~p~~iav~p~~g~lyv~-d------------------------------------------------~~~~I~~~d~ 247 (409)
T 3hrp_A 218 -SGKIGAVALDETEEWLYFV-D------------------------------------------------SNKNFGRFNV 247 (409)
T ss_dssp -CSCCCBCEECTTSSEEEEE-C------------------------------------------------TTCEEEEEET
T ss_pred -cCCcEEEEEeCCCCeEEEE-E------------------------------------------------CCCcEEEEEC
Confidence 0125678999965567764 2 1157888888
Q ss_pred CC-Cceec----CCC--ceE-e-eeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCC-
Q 005240 165 DG-TAKDF----GTP--AVY-T-AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIP- 234 (706)
Q Consensus 165 ~g-~~~~l----t~~--~~~-~-~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p- 234 (706)
++ ....+ ..+ ... . .++|+|++..|+++... ...|++++.++. ...+..........
T Consensus 248 ~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------------~~~I~~~~~~g~-~~~~~g~~~~~g~~d 314 (409)
T 3hrp_A 248 KTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------------LSSVYKITPDGE-CEWFCGSATQKTVQD 314 (409)
T ss_dssp TTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------------TTEEEEECTTCC-EEEEEECTTCCSCBC
T ss_pred CCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------------CCEEEEEecCCC-EEEEEeCCCCCCcCC
Confidence 54 44333 222 111 2 89999988888776543 247999998876 33332221000000
Q ss_pred -cccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEe
Q 005240 235 -VCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH 295 (706)
Q Consensus 235 -~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 295 (706)
......-..+..++++|||+ ||+. +.. . ...|++++. .++....+.
T Consensus 315 g~~~~~~~~~P~gia~d~dG~--lyva-d~~-~--------~~~I~~~~~---~~G~v~~~~ 361 (409)
T 3hrp_A 315 GLREEALFAQPNGMTVDEDGN--FYIV-DGF-K--------GYCLRKLDI---LDGYVSTVA 361 (409)
T ss_dssp EEGGGCBCSSEEEEEECTTCC--EEEE-ETT-T--------TCEEEEEET---TTTEEEEEE
T ss_pred CcccccEeCCCeEEEEeCCCC--EEEE-eCC-C--------CCEEEEEEC---CCCEEEEEe
Confidence 00000001245789999987 6655 220 1 124777775 445555544
No 425
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=98.33 E-value=8.9e-07 Score=88.77 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=55.2
Q ss_pred HCCeEEEEcCCCCcCCCCCCC-Cc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeE
Q 005240 553 ARRFAVLAGPSIPIIGEGDKL-PN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (706)
Q Consensus 553 ~~G~~v~~~~~~~~~g~g~~~-~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a 629 (706)
+.||.|+..+.+ |+|.+. .. ........+|+.++++.+ ..+++.++|||+||.+++.++.++|+++++
T Consensus 67 ~~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 137 (292)
T 3l80_A 67 PDSIGILTIDAP---NSGYSPVSNQANVGLRDWVNAILMIFEHF------KFQSYLLCVHSIGGFAALQIMNQSSKACLG 137 (292)
T ss_dssp CTTSEEEEECCT---TSTTSCCCCCTTCCHHHHHHHHHHHHHHS------CCSEEEEEEETTHHHHHHHHHHHCSSEEEE
T ss_pred hhcCeEEEEcCC---CCCCCCCCCcccccHHHHHHHHHHHHHHh------CCCCeEEEEEchhHHHHHHHHHhCchheee
Confidence 379999996665 455554 21 223555666666655544 335899999999999999999999999999
Q ss_pred EEeccC
Q 005240 630 GIARSG 635 (706)
Q Consensus 630 ~v~~~~ 635 (706)
+|..+|
T Consensus 138 lvl~~~ 143 (292)
T 3l80_A 138 FIGLEP 143 (292)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 999983
No 426
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.33 E-value=3.5e-05 Score=83.00 Aligned_cols=208 Identities=11% Similarity=0.000 Sum_probs=112.9
Q ss_pred ccceeeCC-----CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEE-e-cCCcEEEEEe
Q 005240 33 INFVSWSP-----DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW-V-NNSTLLIFTI 105 (706)
Q Consensus 33 ~~~~~~SP-----DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~w-S-pDg~~l~~~~ 105 (706)
...|..|. ||++| |+.+ .....|-++|+++.+..++...+.. .....+.+ + ||++++++..
T Consensus 87 ~hh~~~s~t~g~~DG~~l-fVnd--------~~~~rVavIdl~t~~~~~ii~ip~g---~~phg~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 87 LHHVHMSFTEGKYDGRFL-FMND--------KANTRVARVRCDVMKCDAILEIPNA---KGIHGLRPQKWPRSNYVFCNG 154 (595)
T ss_dssp BCCEEEEEETTEEEEEEE-EEEE--------TTTTEEEEEETTTTEEEEEEECSSC---CSEEEEEECCSSBCSEEEEEE
T ss_pred CCccccCCCCCCcCCCEE-EEEc--------CCCCEEEEEECCCceEeeEEeCCCC---CCCcceeeeecCCCcEEEEec
Confidence 45588898 99988 5443 4567899999999987776543321 12456676 5 9999987764
Q ss_pred cCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-C-ceecCCCceEeeeeeC
Q 005240 106 PSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-T-AKDFGTPAVYTAVEPS 183 (706)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~-~~~lt~~~~~~~~~~S 183 (706)
.. .... -+.|..+. . . -...+.+-++|.+. + ..++.-++....++.|
T Consensus 155 ~~-~~p~-----~~dg~~l~---------~----------~------~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~s 203 (595)
T 1fwx_A 155 ED-ETPL-----VNDGTNME---------D----------V------ANYVNVFTAVDADKWEVAWQVLVSGNLDNCDAD 203 (595)
T ss_dssp CS-CEES-----SCSSSSTT---------C----------G------GGEEEEEEEEETTTTEEEEEEEESSCCCCEEEC
T ss_pred cc-cccc-----CCCCcccc---------c----------c------cccCceEEEEECCCCeEEEEEEeCCCccceEEC
Confidence 21 1000 00010000 0 0 00225677788843 2 2333333355678899
Q ss_pred CCCcEEEEEeeccCcc-cc-cccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEE
Q 005240 184 PDQKYVLITSMHRPYS-YK-VPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~-~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~ 261 (706)
|||++++.++.....- .. .........+.+.+.. +.....++|+. ++ +
T Consensus 204 pdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~---------------------------~~~~~v~~Gk~-~~-i- 253 (595)
T 1fwx_A 204 YEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA---------------------------EIEKAIAAGDY-QE-L- 253 (595)
T ss_dssp SSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH---------------------------HHHHHHHHTCS-EE-E-
T ss_pred CCCCEEEEEecCcccCcchhhccccccceEEEeecc---------------------------ceeEeccCCCe-eE-E-
Confidence 9999998887654210 00 0000001233333321 11234566665 33 1
Q ss_pred eccCCCCccccCccceeeeecCCCCCC--CCc-eEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 262 AQDRGDANVEVSPRDIIYTQPAEPAEG--EKP-EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~d~~~~~~--~~~-~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
+.+-++|. .. ++. ..........-.+.+||||++++... . ...++.++|.++
T Consensus 254 --------------~~V~VID~---~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~-~--~s~~VsVid~~~ 308 (595)
T 1fwx_A 254 --------------NGVKVVDG---RKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAG-K--LSPTVTVLDVTR 308 (595)
T ss_dssp --------------TTEEEEEC---SGGGCCSSEEEEEEESSCCCEEECTTSSEEEEEC-T--TSSBEEEEEGGG
T ss_pred --------------CcEEEEeC---cccCCceeEEEEecCCCceEEEEcCCCCEEEEeC-C--CCCeEEEEECcc
Confidence 12556676 33 222 22222344566789999999988754 2 334577888775
No 427
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.32 E-value=1.1e-06 Score=93.52 Aligned_cols=109 Identities=9% Similarity=-0.091 Sum_probs=75.5
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 589 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~ 589 (706)
.|+||++||.+.. ....+.......|++ .||.|+..+.+ |+|.+... ........+|+.+.
T Consensus 70 ~p~vvliHG~~~~-------------~~~~w~~~l~~~l~~~~~~~Vi~~D~~---G~G~S~~~~~~~~~~~~~~dl~~l 133 (452)
T 1bu8_A 70 RKTRFIVHGFIDK-------------GEDGWLLDMCKKMFQVEKVNCICVDWR---RGSRTEYTQASYNTRVVGAEIAFL 133 (452)
T ss_dssp SEEEEEECCSCCT-------------TCTTHHHHHHHHHHTTCCEEEEEEECH---HHHSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC-------------CCchHHHHHHHHHHhhCCCEEEEEech---hcccCchhHhHhhHHHHHHHHHHH
Confidence 4889999996421 000011112345555 49999986654 44544321 11234567888999
Q ss_pred HHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 590 ~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
+++|.++.-++.+++.|+|||+||++|+.++.+.|++++.++...|..
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 134 VQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 999976534567899999999999999999999999999999987653
No 428
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=98.32 E-value=4.2e-07 Score=90.81 Aligned_cols=130 Identities=18% Similarity=0.065 Sum_probs=66.9
Q ss_pred CceEEEEEEccCCeE-EEEEEEecCCCCCCC-----CCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH
Q 005240 480 LQKEMIKYQRKDGVP-LTATLYLPPGYDQSK-----DGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA 553 (706)
Q Consensus 480 ~~~~~~~~~~~dg~~-i~~~l~~P~~~~~~~-----~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 553 (706)
+..|.+.|++.++.. ...|+..+.. .+.. ....|.||++||.+.. ...+ ..++..|++
T Consensus 13 ~~~~~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lvllHG~~~~-----------~~~~----~~l~~~L~~ 76 (280)
T 3qmv_A 13 LGTENLYFQSNALLSQRSAWFPRPVA-APAAEPPDPAAAPLRLVCFPYAGGT-----------VSAF----RGWQERLGD 76 (280)
T ss_dssp ---------------CHHHHSCCCCC-CCCCCCCCTTTCSEEEEEECCTTCC-----------GGGG----TTHHHHHCT
T ss_pred cCcceeeeecchhhhhcchheecCCC-CCcccccccCCCCceEEEECCCCCC-----------hHHH----HHHHHhcCC
Confidence 356677787766532 2233333221 1111 0012789999996421 1112 134555655
Q ss_pred CCeEEEEcCCCCcCCCCCCCC--chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCcee---
Q 005240 554 RRFAVLAGPSIPIIGEGDKLP--NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFC--- 628 (706)
Q Consensus 554 ~G~~v~~~~~~~~~g~g~~~~--~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~--- 628 (706)
||.|+..+.+ |+|.+.. ........++|+.+.++.+. ...++.++||||||.+++.++.+.|++++
T Consensus 77 -~~~v~~~D~~---G~G~S~~~~~~~~~~~~a~~~~~~l~~~~-----~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~ 147 (280)
T 3qmv_A 77 -EVAVVPVQLP---GRGLRLRERPYDTMEPLAEAVADALEEHR-----LTHDYALFGHSMGALLAYEVACVLRRRGAPRP 147 (280)
T ss_dssp -TEEEEECCCT---TSGGGTTSCCCCSHHHHHHHHHHHHHHTT-----CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCC
T ss_pred -CceEEEEeCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCc
Confidence 9999996665 4444322 22234556666666555432 34689999999999999999999877665
Q ss_pred -EEEecc
Q 005240 629 -CGIARS 634 (706)
Q Consensus 629 -a~v~~~ 634 (706)
.++..+
T Consensus 148 ~~l~l~~ 154 (280)
T 3qmv_A 148 RHLFVSG 154 (280)
T ss_dssp SCEEEES
T ss_pred eEEEEEC
Confidence 555543
No 429
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.31 E-value=8.5e-07 Score=94.18 Aligned_cols=109 Identities=10% Similarity=-0.002 Sum_probs=75.6
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 589 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~ 589 (706)
.|+||++||.+.. +...+ ....+..|++ .||.|+..+.+ |+|.+... .........|+.++
T Consensus 70 ~~~vvllHG~~~s----------~~~~w---~~~~~~~l~~~~~~~Vi~~D~~---g~g~s~~~~~~~~~~~~~~dl~~~ 133 (432)
T 1gpl_A 70 RKTRFIIHGFTDS----------GENSW---LSDMCKNMFQVEKVNCICVDWK---GGSKAQYSQASQNIRVVGAEVAYL 133 (432)
T ss_dssp SEEEEEECCTTCC----------TTSHH---HHHHHHHHHHHCCEEEEEEECH---HHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCC----------CCchH---HHHHHHHHHhcCCcEEEEEECc---cccCccchhhHhhHHHHHHHHHHH
Confidence 4889999995311 00001 1113455665 79999986665 44444321 11234567889999
Q ss_pred HHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 590 ~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
++++.++.-++.+++.++|||+||++|+.++.+.|++++.+++..|..
T Consensus 134 i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 134 VQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 999986533567899999999999999999999999999988887653
No 430
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.31 E-value=2.1e-05 Score=83.79 Aligned_cols=118 Identities=8% Similarity=0.067 Sum_probs=68.9
Q ss_pred ceEeeeeeCCC-CcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCC
Q 005240 175 AVYTAVEPSPD-QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADK 253 (706)
Q Consensus 175 ~~~~~~~~SpD-G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg 253 (706)
..+..++|+|+ ++.|+..+.+ ..|.+||+.++......... . ..+..++|+|||
T Consensus 150 ~~V~~v~~~p~~~~~las~s~D-------------g~v~iwD~~~~~~~~~~~~~-~-----------~~v~~v~wspdg 204 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLAD-------------GSIAVLQVTETVKVCATLPS-T-----------VAVTSVCWSPKG 204 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETT-------------SCEEEEEESSSEEEEEEECG-G-----------GCEEEEEECTTS
T ss_pred CceEEEEECCCCCCEEEEEECC-------------CeEEEEEcCCCcceeeccCC-C-----------CceeEEEEcCCC
Confidence 57889999998 5666544433 37999999866332111110 0 224578999999
Q ss_pred CceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec-------ccccccceecCCCceEEEEeecc---ccc
Q 005240 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL-------DLRFRSVSWCDDSLALVNETWYK---TSQ 323 (706)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------~~~~~~~~wspDg~~l~~~~~~~---~~~ 323 (706)
+. |+... .+ +.|.+||. .+.....+... ...+..+.|++++..++...... ...
T Consensus 205 ~~-lasgs-~d-----------g~v~iwd~---~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 205 KQ-LAVGK-QN-----------GTVVQYLP---TLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp SC-EEEEE-TT-----------SCEEEECT---TCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CE-EEEEc-CC-----------CcEEEEcc---CCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 87 65332 11 24778887 42222233221 12677889999988776544332 122
Q ss_pred eEEEEEcCCC
Q 005240 324 TRTWLVCPGS 333 (706)
Q Consensus 324 ~~l~~~d~~~ 333 (706)
..+..+++..
T Consensus 269 ~~v~i~~l~~ 278 (434)
T 2oit_A 269 PDVVMALLPK 278 (434)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEEecc
Confidence 3355666554
No 431
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.30 E-value=0.0012 Score=65.78 Aligned_cols=192 Identities=13% Similarity=0.089 Sum_probs=109.5
Q ss_pred CcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 005240 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (706)
Q Consensus 31 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~ 110 (706)
.....+.++|||+.. ++. .....|++++.+ ++...+..... ...+..+.+++||+. ++...
T Consensus 15 ~~~~~i~~d~~g~l~-v~~---------~~~~~v~~~d~~-~~~~~~~~~~~---~~~~~~i~~~~~g~l-~v~~~---- 75 (299)
T 2z2n_A 15 TGPYGITVSDKGKVW-ITQ---------HKANMISCINLD-GKITEYPLPTP---DAKVMCLTISSDGEV-WFTEN---- 75 (299)
T ss_dssp CCEEEEEECTTSCEE-EEE---------TTTTEEEEECTT-CCEEEEECSST---TCCEEEEEECTTSCE-EEEET----
T ss_pred CCccceEECCCCCEE-EEe---------cCCCcEEEEcCC-CCeEEecCCcc---cCceeeEEECCCCCE-EEeCC----
Confidence 357788999999743 332 234689999988 66555432111 112567888899984 44321
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCCceecCC---CceEeeeeeCCCCc
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGT---PAVYTAVEPSPDQK 187 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~~~~lt~---~~~~~~~~~SpDG~ 187 (706)
....|++++.+|+.+.+.. ...+..++++|||+
T Consensus 76 --------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~ 111 (299)
T 2z2n_A 76 --------------------------------------------AANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGD 111 (299)
T ss_dssp --------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSC
T ss_pred --------------------------------------------CCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCC
Confidence 1156888887765444331 24677889999985
Q ss_pred EEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCC
Q 005240 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (706)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~ 267 (706)
|++.... ...|++++.++. .+.+.... .. ..+..+.+.++|+ |++...
T Consensus 112 -l~v~~~~------------~~~i~~~d~~g~-~~~~~~~~-~~----------~~~~~i~~~~~g~--l~v~~~----- 159 (299)
T 2z2n_A 112 -IWFTEMN------------GNRIGRITDDGK-IREYELPN-KG----------SYPSFITLGSDNA--LWFTEN----- 159 (299)
T ss_dssp -EEEEETT------------TTEEEEECTTCC-EEEEECSS-TT----------CCEEEEEECTTSC--EEEEET-----
T ss_pred -EEEEecC------------CceEEEECCCCC-EEEecCCC-CC----------CCCceEEEcCCCC--EEEEeC-----
Confidence 5554432 137888988443 33332111 00 1234678888885 665421
Q ss_pred CccccCccceeeeecCCCCCCCCceEEe--ecccccccceecCCCceEEEEeeccccceEEEEEcC
Q 005240 268 ANVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (706)
Q Consensus 268 ~~~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (706)
....|+++|. +++...+. ........+.+.++|+ |++.. . ....|+++|.
T Consensus 160 ------~~~~i~~~~~----~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~-~--~~~~i~~~~~ 211 (299)
T 2z2n_A 160 ------QNNAIGRITE----SGDITEFKIPTPASGPVGITKGNDDA-LWFVE-I--IGNKIGRITT 211 (299)
T ss_dssp ------TTTEEEEECT----TCCEEEEECSSTTCCEEEEEECTTSS-EEEEE-T--TTTEEEEECT
T ss_pred ------CCCEEEEEcC----CCcEEEeeCCCCCCcceeEEECCCCC-EEEEc-c--CCceEEEECC
Confidence 1124777765 24444432 1223455678889987 44332 1 2346999998
No 432
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=98.30 E-value=2.2e-06 Score=87.40 Aligned_cols=113 Identities=10% Similarity=-0.042 Sum_probs=70.5
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..+.....-+ ++-|.||++||.+.. ...|. ..+..|++ .|.|++++-+ |+
T Consensus 28 ~~g~~l~y~~~G~--------g~~~~vvllHG~~~~-----------~~~w~----~~~~~L~~-~~~via~Dl~---Gh 80 (318)
T 2psd_A 28 VLDSFINYYDSEK--------HAENAVIFLHGNATS-----------SYLWR----HVVPHIEP-VARCIIPDLI---GM 80 (318)
T ss_dssp ETTEEEEEEECCS--------CTTSEEEEECCTTCC-----------GGGGT----TTGGGTTT-TSEEEEECCT---TS
T ss_pred eCCeEEEEEEcCC--------CCCCeEEEECCCCCc-----------HHHHH----HHHHHhhh-cCeEEEEeCC---CC
Confidence 3777776544311 123579999996421 11121 12233444 4678875554 56
Q ss_pred CCCCCc--h-hhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 570 GDKLPN--D-RFVEQLVSSAEAAVEEVVRRGVADP-SRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 570 g~~~~~--~-~~~~~~~~D~~~~~~~l~~~~~id~-~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
|.+... . ...+...+|+.+.++.+ +. +++.++||||||.+++.++.++|++++++|..++
T Consensus 81 G~S~~~~~~~~~~~~~a~dl~~ll~~l------~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~ 144 (318)
T 2psd_A 81 GKSGKSGNGSYRLLDHYKYLTAWFELL------NLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMES 144 (318)
T ss_dssp TTCCCCTTSCCSHHHHHHHHHHHHTTS------CCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHhc------CCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEecc
Confidence 655432 1 12455555655544432 33 7899999999999999999999999999998653
No 433
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.30 E-value=7.2e-05 Score=75.90 Aligned_cols=198 Identities=14% Similarity=0.071 Sum_probs=126.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCcee--ecccCCCccccccccceEEecCCcEEEEEecCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAK--PLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~--~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~ 109 (706)
....+.|.+.+.+|+++. .....|+.++++++... .+..... ....+++.+.+..||+.-.
T Consensus 36 ~~~~ld~d~~~~~lyw~D---------~~~~~I~r~~~~g~~~~~~~~~~~l~-----~p~glavd~~~g~ly~~d~--- 98 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSD---------VSEEAIKRTEFNKTESVQNVVVSGLL-----SPDGLACDWLGEKLYWTDS--- 98 (318)
T ss_dssp EEEEEEEEGGGTEEEEEE---------TTTTEEEEEETTSSSCCCEEEEECCS-----CCCEEEEETTTTEEEEEET---
T ss_pred ccEEEEEEeCCCEEEEEE---------CCCCcEEEEEccCCCceEEEEcCCCC-----CccEEEEEcCCCeEEEEEC---
Confidence 455778999999997764 33468999999877432 1221111 1456788887777777621
Q ss_pred CCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecC-CC-ceEeeeeeCCCC
Q 005240 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TP-AVYTAVEPSPDQ 186 (706)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt-~~-~~~~~~~~SpDG 186 (706)
....|.+++++| ..+.+. .. .....+++.|.+
T Consensus 99 ---------------------------------------------~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~ 133 (318)
T 3sov_A 99 ---------------------------------------------ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSS 133 (318)
T ss_dssp ---------------------------------------------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGG
T ss_pred ---------------------------------------------CCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCC
Confidence 125788999988 344443 33 567889999998
Q ss_pred cEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCC
Q 005240 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (706)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~ 266 (706)
.+|+++.... ...|++++++|...+.+..... ..+..++++|+++. |||+..
T Consensus 134 g~ly~td~~~-----------~~~I~r~~~dG~~~~~~~~~~l------------~~Pnglavd~~~~~-lY~aD~---- 185 (318)
T 3sov_A 134 GFMYWTDWGE-----------VPKIERAGMDGSSRFIIINSEI------------YWPNGLTLDYEEQK-LYWADA---- 185 (318)
T ss_dssp TEEEEEECSS-----------SCEEEEEETTSCSCEEEECSSC------------SCEEEEEEETTTTE-EEEEET----
T ss_pred CEEEEEecCC-----------CCEEEEEEcCCCCeEEEEECCC------------CCccEEEEeccCCE-EEEEEC----
Confidence 8998876432 2479999999877666543221 11347899998887 888732
Q ss_pred CCccccCccceeeeecCCCCCCCCceEEee-cccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 267 DANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 267 ~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
....|++++. +++..+.+.. .......++. |+..|+++.. ....|++++..++
T Consensus 186 -------~~~~I~~~d~---dG~~~~~~~~~~~~~P~glav--~~~~lywtd~---~~~~V~~~~~~~G 239 (318)
T 3sov_A 186 -------KLNFIHKSNL---DGTNRQAVVKGSLPHPFALTL--FEDILYWTDW---STHSILACNKYTG 239 (318)
T ss_dssp -------TTTEEEEEET---TSCSCEEEECSCCSCEEEEEE--ETTEEEEEET---TTTEEEEEETTTC
T ss_pred -------CCCEEEEEcC---CCCceEEEecCCCCCceEEEE--eCCEEEEEec---CCCeEEEEECCCC
Confidence 1235888888 6666665543 2222333444 3446666532 3457999998664
No 434
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.29 E-value=3.9e-05 Score=81.82 Aligned_cols=147 Identities=14% Similarity=0.109 Sum_probs=87.7
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCC-----ce-ee---cccCCCccccccccceEEecC-CcEE
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG-----EA-KP---LFESPDICLNAVFGSFVWVNN-STLL 101 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g-----~~-~~---lt~~~~~~~~~~~~~~~wSpD-g~~l 101 (706)
.+...+|||||++||..... +.....|.++|+.++ +. +. +....++ ...+..+.|+|+ +..|
T Consensus 94 ~v~~l~~spdg~~lav~~~s------gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h--~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMS------SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA--GGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEE------TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG--GGSEEEEEECSSCTTEE
T ss_pred cccEEEEcCCCCEEEEEEec------cCCCceEEEEEccccccCCcCCcceeeeeeccCCC--CCceEEEEECCCCCCEE
Confidence 58889999999999863210 133467888887654 11 11 1111111 123778999998 6777
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCce-ecCCC-ceEe
Q 005240 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAK-DFGTP-AVYT 178 (706)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~-~lt~~-~~~~ 178 (706)
+..+.+ +.|.++|+ ++... ..... ..+.
T Consensus 166 as~s~D-------------------------------------------------g~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 166 AVCLAD-------------------------------------------------GSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEETT-------------------------------------------------SCEEEEEESSSEEEEEEECGGGCEE
T ss_pred EEEECC-------------------------------------------------CeEEEEEcCCCcceeeccCCCCcee
Confidence 765421 56777788 44221 22222 5788
Q ss_pred eeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCC-CCCcccCccCCCCcceeeecCCCc
Q 005240 179 AVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAE-DIPVCYNSVREGMRSISWRADKPS 255 (706)
Q Consensus 179 ~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~-~~p~~~~~~~~g~~~~~~spdg~~ 255 (706)
.++|||||++|+..+.. ..|.+|++.+...+.+....... ..+ ..+..+.|++++..
T Consensus 197 ~v~wspdg~~lasgs~d-------------g~v~iwd~~~~~~~~~~~~~~~~~~~~-------~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQN-------------GTVVQYLPTLQEKKVIPCPPFYESDHP-------VRVLDVLWIGTYVF 254 (434)
T ss_dssp EEEECTTSSCEEEEETT-------------SCEEEECTTCCEEEEECCCTTCCTTSC-------EEEEEEEEEETTEE
T ss_pred EEEEcCCCCEEEEEcCC-------------CcEEEEccCCcccccccCCcccCCCCc-------eeEEEEEEecCceE
Confidence 99999999999876643 37999999855444443221110 000 12347899998765
No 435
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.29 E-value=0.00016 Score=71.99 Aligned_cols=201 Identities=12% Similarity=0.087 Sum_probs=112.6
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCC-ccccccccceEEe-cCCcEEEEEecCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPD-ICLNAVFGSFVWV-NNSTLLIFTIPSSR 109 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~-~~~~~~~~~~~wS-pDg~~l~~~~~~~~ 109 (706)
....++++|||+ |+.+. .....|++++.++...+.+..... ......+..++++ ++|+ |++....
T Consensus 31 ~p~~v~~~~~g~-l~v~~---------~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~-- 97 (286)
T 1q7f_A 31 EPSGVAVNAQND-IIVAD---------TNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERS-- 97 (286)
T ss_dssp CEEEEEECTTCC-EEEEE---------GGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECG--
T ss_pred CCceEEECCCCC-EEEEE---------CCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCC--
Confidence 356788999997 43332 233578899988655444432110 0000114567784 6665 4443210
Q ss_pred CCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCC-ceecCCC--ceEeeeeeCCCC
Q 005240 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGT-AKDFGTP--AVYTAVEPSPDQ 186 (706)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~-~~~lt~~--~~~~~~~~SpDG 186 (706)
....|++++.+|+ .+.+... .....++++|||
T Consensus 98 ---------------------------------------------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g 132 (286)
T 1q7f_A 98 ---------------------------------------------PTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKG 132 (286)
T ss_dssp ---------------------------------------------GGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTS
T ss_pred ---------------------------------------------CCCEEEEECCCCcEEEEecCccCCCceEEEEeCCC
Confidence 1257888887774 3334322 467789999999
Q ss_pred cEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCC
Q 005240 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRG 266 (706)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~ 266 (706)
+ |+++... ...|++|+.++...+.+.... .. ..+..++++|||+ ||+.. ..
T Consensus 133 ~-l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~-~~----------~~p~~i~~~~~g~--l~v~~-~~-- 183 (286)
T 1q7f_A 133 R-IIVVECK------------VMRVIIFDQNGNVLHKFGCSK-HL----------EFPNGVVVNDKQE--IFISD-NR-- 183 (286)
T ss_dssp C-EEEEETT------------TTEEEEECTTSCEEEEEECTT-TC----------SSEEEEEECSSSE--EEEEE-GG--
T ss_pred C-EEEEECC------------CCEEEEEcCCCCEEEEeCCCC-cc----------CCcEEEEECCCCC--EEEEE-CC--
Confidence 6 5555432 247999998877665553211 00 1244788999986 55442 21
Q ss_pred CCccccCccceeeeecCCCCCCCCceEEeec--ccccccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 267 DANVEVSPRDIIYTQPAEPAEGEKPEILHKL--DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 267 ~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~--~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
...|++++. ++.....+... ......+++++||..++... . ....|.+++.++
T Consensus 184 --------~~~i~~~~~---~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~--~-~~~~i~~~~~~g 238 (286)
T 1q7f_A 184 --------AHCVKVFNY---EGQYLRQIGGEGITNYPIGVGINSNGEILIADN--H-NNFNLTIFTQDG 238 (286)
T ss_dssp --------GTEEEEEET---TCCEEEEESCTTTSCSEEEEEECTTCCEEEEEC--S-SSCEEEEECTTS
T ss_pred --------CCEEEEEcC---CCCEEEEEccCCccCCCcEEEECCCCCEEEEeC--C-CCEEEEEECCCC
Confidence 124778876 44333333322 13456788999996444322 1 122688888765
No 436
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=98.29 E-value=2.8e-06 Score=85.15 Aligned_cols=79 Identities=14% Similarity=0.112 Sum_probs=55.9
Q ss_pred HHHHHCCeEEEEcCCCCcCCCCCCCCc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC
Q 005240 549 LIFLARRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 625 (706)
Q Consensus 549 ~~l~~~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~ 625 (706)
..|+ .+|.|+..+.+ |+|.+... ....+...+|+.+.++.+ +.+++.++||||||.+++.++.++|+
T Consensus 61 ~~l~-~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~GG~ia~~~a~~~p~ 130 (289)
T 1u2e_A 61 PLVE-AGYRVILLDCP---GWGKSDSVVNSGSRSDLNARILKSVVDQL------DIAKIHLLGNSMGGHSSVAFTLKWPE 130 (289)
T ss_dssp HHHH-TTCEEEEECCT---TSTTSCCCCCSSCHHHHHHHHHHHHHHHT------TCCCEEEEEETHHHHHHHHHHHHCGG
T ss_pred HHHh-cCCeEEEEcCC---CCCCCCCCCccccCHHHHHHHHHHHHHHh------CCCceEEEEECHhHHHHHHHHHHCHH
Confidence 3444 45999986665 45555332 223444555555554433 34689999999999999999999999
Q ss_pred ceeEEEeccCCC
Q 005240 626 LFCCGIARSGSY 637 (706)
Q Consensus 626 ~~~a~v~~~~~~ 637 (706)
+++++|+.++..
T Consensus 131 ~v~~lvl~~~~~ 142 (289)
T 1u2e_A 131 RVGKLVLMGGGT 142 (289)
T ss_dssp GEEEEEEESCSC
T ss_pred hhhEEEEECCCc
Confidence 999999987643
No 437
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=98.29 E-value=6.1e-06 Score=81.03 Aligned_cols=60 Identities=15% Similarity=0.100 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC-----ceeEEEeccCCCCC
Q 005240 578 FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYNK 639 (706)
Q Consensus 578 ~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~~~~d~ 639 (706)
......+|+..+++.+.++..+ .++.++||||||.+++.++.++|+ +++++|+.++.++.
T Consensus 72 ~~~~~a~~l~~~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g 136 (254)
T 3ds8_A 72 TPDDWSKWLKIAMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFND 136 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTC
T ss_pred CHHHHHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCc
Confidence 3466678888888888776323 689999999999999999999988 89999999987653
No 438
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.29 E-value=6.9e-05 Score=79.88 Aligned_cols=185 Identities=11% Similarity=0.066 Sum_probs=105.2
Q ss_pred eeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCC
Q 005240 36 VSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKK 115 (706)
Q Consensus 36 ~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~ 115 (706)
..+++||++|+.... ...|.++|+.+++.......... .+..+.| |++.|+..+.
T Consensus 137 ~~~~~d~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~h~~----~v~~l~~--~~~~l~sg~~--------- 191 (435)
T 1p22_A 137 YCLQYDDQKIVSGLR----------DNTIKIWDKNTLECKRILTGHTG----SVLCLQY--DERVIITGSS--------- 191 (435)
T ss_dssp EEEECCSSEEEEEES----------SSCEEEEESSSCCEEEEECCCSS----CEEEEEC--CSSEEEEEET---------
T ss_pred EEEEECCCEEEEEeC----------CCeEEEEeCCCCeEEEEEcCCCC----cEEEEEE--CCCEEEEEcC---------
Confidence 356779999988643 35677889888876655432221 2555555 8888776642
Q ss_pred CCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCCC-ceEeeeeeCCCCcEEEEE
Q 005240 116 TMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGTP-AVYTAVEPSPDQKYVLIT 192 (706)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~~-~~~~~~~~SpDG~~i~~~ 192 (706)
.+.|.++++ +++ ...+... ..+..++|++ +.|+..
T Consensus 192 ----------------------------------------dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~ 229 (435)
T 1p22_A 192 ----------------------------------------DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTC 229 (435)
T ss_dssp ----------------------------------------TSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEE
T ss_pred ----------------------------------------CCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEe
Confidence 156778888 554 3344433 6778888874 355544
Q ss_pred eeccCcccccccccccceEEEEecCCCeeEEc-ccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccc
Q 005240 193 SMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVE 271 (706)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~ 271 (706)
+.. ..|.+|++.++....+ ....+.. ..+..+.| +++. |+... .
T Consensus 230 s~d-------------g~i~vwd~~~~~~~~~~~~~~~~~----------~~v~~~~~--~~~~-l~s~~-~-------- 274 (435)
T 1p22_A 230 SKD-------------RSIAVWDMASPTDITLRRVLVGHR----------AAVNVVDF--DDKY-IVSAS-G-------- 274 (435)
T ss_dssp ETT-------------SCEEEEECSSSSCCEEEEEECCCS----------SCEEEEEE--ETTE-EEEEE-T--------
T ss_pred eCC-------------CcEEEEeCCCCCCceeeeEecCCC----------CcEEEEEe--CCCE-EEEEe-C--------
Confidence 432 3799999985542211 1111110 11224455 5654 44321 1
Q ss_pred cCccceeeeecCCCCCCCCce-EEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 272 VSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 272 ~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
.+.|.++|+ .+++.. .+......+..+.| ++..|+..+. ...|.++|+.++
T Consensus 275 ---dg~i~vwd~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~----dg~i~iwd~~~~ 326 (435)
T 1p22_A 275 ---DRTIKVWNT---STCEFVRTLNGHKRGIACLQY--RDRLVVSGSS----DNTIRLWDIECG 326 (435)
T ss_dssp ---TSEEEEEET---TTCCEEEEEECCSSCEEEEEE--ETTEEEEEET----TSCEEEEETTTC
T ss_pred ---CCeEEEEEC---CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeC----CCeEEEEECCCC
Confidence 125788888 444443 34445566666777 4566666542 224677777764
No 439
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.28 E-value=3.5e-06 Score=84.27 Aligned_cols=81 Identities=16% Similarity=0.095 Sum_probs=58.6
Q ss_pred hHHHHHHHCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC
Q 005240 546 TSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 625 (706)
Q Consensus 546 ~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~ 625 (706)
.....|.++||.|+..+.+ |+|.. ....+...+|+..+++.+ +.++|.++||||||.++..++.+.|+
T Consensus 30 ~~~~~L~~~G~~v~~~d~~---g~g~s---~~~~~~~~~~i~~~~~~~------~~~~v~lvGhS~GG~~a~~~a~~~p~ 97 (285)
T 1ex9_A 30 GIPSALRRDGAQVYVTEVS---QLDTS---EVRGEQLLQQVEEIVALS------GQPKVNLIGHSHGGPTIRYVAAVRPD 97 (285)
T ss_dssp THHHHHHHTTCCEEEECCC---SSSCH---HHHHHHHHHHHHHHHHHH------CCSCEEEEEETTHHHHHHHHHHHCGG
T ss_pred HHHHHHHhCCCEEEEEeCC---CCCCc---hhhHHHHHHHHHHHHHHh------CCCCEEEEEECHhHHHHHHHHHhChh
Confidence 3567788999999986664 34432 122334444555544433 34689999999999999999999999
Q ss_pred ceeEEEeccCCCC
Q 005240 626 LFCCGIARSGSYN 638 (706)
Q Consensus 626 ~~~a~v~~~~~~d 638 (706)
+++++|..++...
T Consensus 98 ~v~~lv~i~~p~~ 110 (285)
T 1ex9_A 98 LIASATSVGAPHK 110 (285)
T ss_dssp GEEEEEEESCCTT
T ss_pred heeEEEEECCCCC
Confidence 9999999988543
No 440
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.28 E-value=3.1e-05 Score=75.57 Aligned_cols=207 Identities=8% Similarity=0.007 Sum_probs=120.9
Q ss_pred eecCCCCC--cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEE
Q 005240 24 VHGYPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLL 101 (706)
Q Consensus 24 i~~~~~~~--~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l 101 (706)
+..+|.+. ....+.|+||| +| |.++. ..+...|.++|+++++..+-...+.. ........+|+.|
T Consensus 12 v~~~p~~~~~f~~Gl~~~~dg-~L-yvstg------~~~~s~v~~iD~~tg~v~~~i~l~~~-----~fgeGi~~~g~~l 78 (266)
T 2iwa_A 12 LNEFPHDPYAFTQGLVYAEND-TL-FESTG------LYGRSSVRQVALQTGKVENIHKMDDS-----YFGEGLTLLNEKL 78 (266)
T ss_dssp EEEEECCTTCCEEEEEECSTT-EE-EEEEC------STTTCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEETTEE
T ss_pred EEEEECCCCCCcccEEEeCCC-eE-EEECC------CCCCCEEEEEECCCCCEEEEEecCCC-----cceEEEEEeCCEE
Confidence 44445553 34688999996 55 54431 13468999999999987654322221 1222344457777
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC-CceecCCCceEee
Q 005240 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTPAVYTA 179 (706)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g-~~~~lt~~~~~~~ 179 (706)
|.... ..+.++++|. ++ ....+..+ ....
T Consensus 79 yv~t~------------------------------------------------~~~~v~viD~~t~~v~~~i~~g-~~~g 109 (266)
T 2iwa_A 79 YQVVW------------------------------------------------LKNIGFIYDRRTLSNIKNFTHQ-MKDG 109 (266)
T ss_dssp EEEET------------------------------------------------TCSEEEEEETTTTEEEEEEECC-SSSC
T ss_pred EEEEe------------------------------------------------cCCEEEEEECCCCcEEEEEECC-CCCe
Confidence 77642 1268899998 45 33444332 1223
Q ss_pred eeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCe-eEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEE
Q 005240 180 VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (706)
Q Consensus 180 ~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~ 258 (706)
..+++||++|+.+. . ...|.++|..+.+ .+.+.-... ..|. .....+.|. || . ||
T Consensus 110 ~glt~Dg~~l~vs~-g------------s~~l~viD~~t~~v~~~I~Vg~~--~~p~------~~~nele~~-dg-~-ly 165 (266)
T 2iwa_A 110 WGLATDGKILYGSD-G------------TSILYEIDPHTFKLIKKHNVKYN--GHRV------IRLNELEYI-NG-E-VW 165 (266)
T ss_dssp CEEEECSSSEEEEC-S------------SSEEEEECTTTCCEEEEEECEET--TEEC------CCEEEEEEE-TT-E-EE
T ss_pred EEEEECCCEEEEEC-C------------CCeEEEEECCCCcEEEEEEECCC--Cccc------ccceeEEEE-CC-E-EE
Confidence 45788999997653 3 2489999998754 344432211 0110 012245666 65 3 55
Q ss_pred EEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecc--------------cccccceecCCCceEEEEeeccccce
Q 005240 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--------------LRFRSVSWCDDSLALVNETWYKTSQT 324 (706)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--------------~~~~~~~wspDg~~l~~~~~~~~~~~ 324 (706)
+.. +..+.|.++|. +++++....... .....++|+||+++++.+. ..+.
T Consensus 166 -vn~----------~~~~~V~vID~---~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg---k~~~ 228 (266)
T 2iwa_A 166 -ANI----------WQTDCIARISA---KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG---KLWP 228 (266)
T ss_dssp -EEE----------TTSSEEEEEET---TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE---TTCS
T ss_pred -Eec----------CCCCeEEEEEC---CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC---CCCC
Confidence 322 12346889998 677765433221 2346789999999888754 2566
Q ss_pred EEEEEcCCC
Q 005240 325 RTWLVCPGS 333 (706)
Q Consensus 325 ~l~~~d~~~ 333 (706)
+|+.+++..
T Consensus 229 ~v~~i~l~~ 237 (266)
T 2iwa_A 229 KLFEIKLHL 237 (266)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEec
Confidence 799998765
No 441
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.28 E-value=4.7e-06 Score=83.20 Aligned_cols=83 Identities=8% Similarity=-0.119 Sum_probs=61.2
Q ss_pred HHHHHHHCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC---
Q 005240 547 SSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA--- 623 (706)
Q Consensus 547 ~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~--- 623 (706)
+...|.++||.|+..+.. |+|... .....+++...++++.+.. ..+++.|+||||||.++.+++.+.
T Consensus 86 l~~~L~~~Gy~V~a~Dlp---G~G~~~-----~~~~~~~la~~I~~l~~~~--g~~~v~LVGHSmGGlvA~~al~~~p~~ 155 (316)
T 3icv_A 86 WIPLSAQLGYTPCWISPP---PFMLND-----TQVNTEYMVNAITTLYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSI 155 (316)
T ss_dssp HHHHHHHTTCEEEEECCT---TTTCSC-----HHHHHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHCCCeEEEecCC---CCCCCc-----HHHHHHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhcccc
Confidence 567788899999886654 344321 2334566777777777652 236899999999999998888775
Q ss_pred CCceeEEEeccCCCCC
Q 005240 624 PHLFCCGIARSGSYNK 639 (706)
Q Consensus 624 p~~~~a~v~~~~~~d~ 639 (706)
+++++.+|+.++.+..
T Consensus 156 ~~~V~~lV~lapp~~G 171 (316)
T 3icv_A 156 RSKVDRLMAFAPDYKG 171 (316)
T ss_dssp TTTEEEEEEESCCTTC
T ss_pred chhhceEEEECCCCCC
Confidence 5899999999987653
No 442
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.27 E-value=0.00022 Score=79.28 Aligned_cols=181 Identities=10% Similarity=0.024 Sum_probs=122.4
Q ss_pred eeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhc
Q 005240 62 LRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNL 141 (706)
Q Consensus 62 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (706)
.+|..+++++.....+..... +. ....++|++++..||++-.
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~--~~-~~~~l~~d~~~~~lywtD~----------------------------------- 56 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTG--VK-EASALDFDVTDNRIYWTDI----------------------------------- 56 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCS--CS-CEEEEEEETTTTEEEEEET-----------------------------------
T ss_pred CcEEEEECCCCCcceEEEcCC--CC-ceEEEEEECCCCEEEEEEC-----------------------------------
Confidence 689999998765443321111 11 1457889998888887621
Q ss_pred cCCchhhhhhhhcccceEEEEccCC-CceecC-CC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC
Q 005240 142 LKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (706)
Q Consensus 142 ~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 218 (706)
....|++++++| ..+.+. .+ .....+++.+.++.|+++... ...|.+.+++|
T Consensus 57 -------------~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~------------~~~I~v~~~dG 111 (628)
T 4a0p_A 57 -------------SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTG------------TNRIEVSKLDG 111 (628)
T ss_dssp -------------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT------------TTEEEEEETTS
T ss_pred -------------CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECC------------CCEEEEEecCC
Confidence 126889999977 444433 33 456788888889999887543 25899999998
Q ss_pred CeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecc
Q 005240 219 KLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD 298 (706)
Q Consensus 219 ~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 298 (706)
+..+.|..... ..++.++..|.... |||... +. ...|++++. ++...+.+...-
T Consensus 112 ~~~~~l~~~~l------------~~P~~iavdp~~G~-lY~tD~---g~-------~~~I~r~~~---dG~~~~~l~~~~ 165 (628)
T 4a0p_A 112 QHRQVLVWKDL------------DSPRALALDPAEGF-MYWTEW---GG-------KPKIDRAAM---DGSERTTLVPNV 165 (628)
T ss_dssp TTCEEEECSSC------------CCEEEEEEETTTTE-EEEEEC---SS-------SCEEEEEET---TSCSCEEEECSC
T ss_pred CcEEEEEeCCC------------CCcccEEEccCCCe-EEEeCC---CC-------CCEEEEEeC---CCCceEEEECCC
Confidence 87666653322 22457889987665 887631 11 235888888 677777776544
Q ss_pred cccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 299 LRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 299 ~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
.....+++.++++.|+++.. ....|+++|+++.
T Consensus 166 ~~P~GlalD~~~~~LY~aD~---~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDL---DTNLIESSNMLGL 198 (628)
T ss_dssp SSEEEEEEETTTTEEEEEET---TTTEEEEEETTSC
T ss_pred CCcceEEEccccCEEEEEEC---CCCEEEEEcCCCC
Confidence 55667889999988988642 3457999999884
No 443
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=98.25 E-value=5.2e-06 Score=83.42 Aligned_cols=111 Identities=14% Similarity=0.058 Sum_probs=72.0
Q ss_pred cCCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCC
Q 005240 490 KDGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGE 569 (706)
Q Consensus 490 ~dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~ 569 (706)
.+|..++.... +. -|.||++||.+.. ...|. .....| +.+|.|+.++.+ |+
T Consensus 12 ~~~~~~~~~~~-------g~---g~~~vllHG~~~~-----------~~~w~----~~~~~l-~~~~~vi~~Dl~---G~ 62 (291)
T 3qyj_A 12 TTEARINLVKA-------GH---GAPLLLLHGYPQT-----------HVMWH----KIAPLL-ANNFTVVATDLR---GY 62 (291)
T ss_dssp CSSCEEEEEEE-------CC---SSEEEEECCTTCC-----------GGGGT----TTHHHH-TTTSEEEEECCT---TS
T ss_pred cCCeEEEEEEc-------CC---CCeEEEECCCCCC-----------HHHHH----HHHHHH-hCCCEEEEEcCC---CC
Confidence 36777776543 11 2458889997521 11221 123334 568999986655 55
Q ss_pred CCCCCch-------hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccC
Q 005240 570 GDKLPND-------RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSG 635 (706)
Q Consensus 570 g~~~~~~-------~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~ 635 (706)
|.+.... .......+|+.+.++.+ ...++.++||||||.+++.++.++|+++++++..++
T Consensus 63 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (291)
T 3qyj_A 63 GDSSRPASVPHHINYSKRVMAQDQVEVMSKL------GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDI 129 (291)
T ss_dssp TTSCCCCCCGGGGGGSHHHHHHHHHHHHHHT------TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred CCCCCCCCCccccccCHHHHHHHHHHHHHHc------CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECC
Confidence 5553321 23445566666655443 235799999999999999999999999999998763
No 444
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=98.24 E-value=3e-06 Score=83.29 Aligned_cols=75 Identities=15% Similarity=0.128 Sum_probs=51.7
Q ss_pred HHHHHHCCeEEEEcCCCCcCCCCCCCCchh-hHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCc
Q 005240 548 SLIFLARRFAVLAGPSIPIIGEGDKLPNDR-FVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHL 626 (706)
Q Consensus 548 ~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~-~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~ 626 (706)
...| +.+|.|+..+.+ |+|.+..... ..+. .++.+.+ .++ +++.++||||||.+++.++.++|++
T Consensus 33 ~~~L-~~~~~vi~~Dl~---G~G~S~~~~~~~~~~-------~~~~l~~--~l~-~~~~lvGhS~Gg~va~~~a~~~p~~ 98 (258)
T 1m33_A 33 DEEL-SSHFTLHLVDLP---GFGRSRGFGALSLAD-------MAEAVLQ--QAP-DKAIWLGWSLGGLVASQIALTHPER 98 (258)
T ss_dssp HHHH-HTTSEEEEECCT---TSTTCCSCCCCCHHH-------HHHHHHT--TSC-SSEEEEEETHHHHHHHHHHHHCGGG
T ss_pred HHHh-hcCcEEEEeeCC---CCCCCCCCCCcCHHH-------HHHHHHH--HhC-CCeEEEEECHHHHHHHHHHHHhhHh
Confidence 4445 468999986554 5565543211 1222 2233332 244 7899999999999999999999999
Q ss_pred eeEEEeccCC
Q 005240 627 FCCGIARSGS 636 (706)
Q Consensus 627 ~~a~v~~~~~ 636 (706)
++++|..++.
T Consensus 99 v~~lvl~~~~ 108 (258)
T 1m33_A 99 VRALVTVASS 108 (258)
T ss_dssp EEEEEEESCC
T ss_pred hceEEEECCC
Confidence 9999987653
No 445
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.24 E-value=0.00029 Score=69.26 Aligned_cols=193 Identities=10% Similarity=-0.046 Sum_probs=114.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
....++++|||+ |+++. . ...|++++.+++....+..... ..+..+.++|||+ |++...
T Consensus 68 ~p~~i~~~~~g~-l~v~~---------~-~~~i~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g~-l~v~~~----- 126 (270)
T 1rwi_B 68 QPQGLAVDGAGT-VYVTD---------F-NNRVVTLAAGSNNQTVLPFDGL----NYPEGLAVDTQGA-VYVADR----- 126 (270)
T ss_dssp SCCCEEECTTCC-EEEEE---------T-TTEEEEECTTCSCCEECCCCSC----SSEEEEEECTTCC-EEEEEG-----
T ss_pred CcceeEECCCCC-EEEEc---------C-CCEEEEEeCCCceEeeeecCCc----CCCcceEECCCCC-EEEEEC-----
Confidence 567889999998 54432 2 4689999988876655532111 1256788899998 444421
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecCCC--ceEeeeeeCCCCcE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKY 188 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt~~--~~~~~~~~SpDG~~ 188 (706)
....|++++... ........ .....++++|||+
T Consensus 127 -------------------------------------------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~- 162 (270)
T 1rwi_B 127 -------------------------------------------GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN- 162 (270)
T ss_dssp -------------------------------------------GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-
T ss_pred -------------------------------------------CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-
Confidence 125677776633 22222222 3567889999997
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~ 268 (706)
|+++... ...|++++.++........... ..+..+.++++|. ||+....
T Consensus 163 l~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~------------~~p~~i~~d~~g~--l~v~~~~----- 211 (270)
T 1rwi_B 163 VYVTDTD------------NNRVVKLEAESNNQVVLPFTDI------------TAPWGIAVDEAGT--VYVTEHN----- 211 (270)
T ss_dssp EEEEEGG------------GTEEEEECTTTCCEEECCCSSC------------CSEEEEEECTTCC--EEEEETT-----
T ss_pred EEEEECC------------CCEEEEEecCCCceEeecccCC------------CCceEEEECCCCC--EEEEECC-----
Confidence 6555433 2479999998776544322111 1234678999984 6654311
Q ss_pred ccccCccceeeeecCCCCCCCCceEEeec-ccccccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 269 NVEVSPRDIIYTQPAEPAEGEKPEILHKL-DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 269 ~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
...|++++. ++.....+... ......+.+++||+ |+++. . ...+|.++++..
T Consensus 212 ------~~~v~~~~~---~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~-~--~~~~v~~~~~~~ 264 (270)
T 1rwi_B 212 ------TNQVVKLLA---GSTTSTVLPFTGLNTPLAVAVDSDRT-VYVAD-R--GNDRVVKLTSLE 264 (270)
T ss_dssp ------TSCEEEECT---TCSCCEECCCCSCSCEEEEEECTTCC-EEEEE-G--GGTEEEEECCCG
T ss_pred ------CCcEEEEcC---CCCcceeeccCCCCCceeEEECCCCC-EEEEE-C--CCCEEEEEcCCC
Confidence 124777777 44443333222 23466788999996 55443 2 334688888765
No 446
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.24 E-value=1.6e-06 Score=92.34 Aligned_cols=109 Identities=7% Similarity=-0.060 Sum_probs=74.4
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHC-CeEEEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLAR-RFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAA 589 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~ 589 (706)
.|+||++||.+.. ....+....+..|++. ||.|+..+.+ |+|.+... ........+|+.+.
T Consensus 70 ~p~vvliHG~~~~-------------~~~~w~~~~~~~l~~~~~~~Vi~~D~~---g~G~S~~~~~~~~~~~~~~dl~~~ 133 (452)
T 1w52_X 70 RKTHFVIHGFRDR-------------GEDSWPSDMCKKILQVETTNCISVDWS---SGAKAEYTQAVQNIRIVGAETAYL 133 (452)
T ss_dssp SCEEEEECCTTCC-------------SSSSHHHHHHHHHHTTSCCEEEEEECH---HHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCC-------------CCchHHHHHHHHHHhhCCCEEEEEecc---cccccccHHHHHhHHHHHHHHHHH
Confidence 3789999995311 0000111134555554 9999986654 44544321 11234567888899
Q ss_pred HHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 590 ~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
+++|.++.-++.+++.|+|||+||++|+.++.+.|++++.++...|..
T Consensus 134 i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 134 IQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp HHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred HHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 999876533456899999999999999999999999999999887653
No 447
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.22 E-value=0.00028 Score=80.33 Aligned_cols=202 Identities=10% Similarity=0.062 Sum_probs=127.8
Q ss_pred CcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCC----ceeecccCCCccccccccceEEecCCcEEEEEec
Q 005240 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETG----EAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIP 106 (706)
Q Consensus 31 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g----~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~ 106 (706)
.....+.|.+.+.+|+++. .....|+.+++++. ....+.... +. .+..++..+.++.||++-.
T Consensus 424 ~~~~gl~~d~~~~~lY~sD---------~~~~~I~~~~l~g~~~~~~~~~vi~~~---l~-~P~GLAvD~~~~~LY~tD~ 490 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSD---------LSQRMICSTQLDRAHGVSSYDTVISRD---IQ-APDGLAVDWIHSNIYWTDS 490 (791)
T ss_dssp SSEEEEEEETTTTEEEEEE---------TTTTEEEEEEC--------CEEEECSS---CS-CCCEEEEETTTTEEEEEET
T ss_pred CceEEEeecccCCeeEEee---------ccceeEEEEeccCCCCCcceeEEEecC---CC-CcceeeeeecCCcEEEEec
Confidence 3466788999888997764 33467999888763 233332211 11 1557788888888887631
Q ss_pred CCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecCC-C-ceEeeeeeC
Q 005240 107 SSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-P-AVYTAVEPS 183 (706)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt~-~-~~~~~~~~S 183 (706)
....|++++++| ..+.|.. . .....+++.
T Consensus 491 ------------------------------------------------~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVD 522 (791)
T 3m0c_C 491 ------------------------------------------------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVD 522 (791)
T ss_dssp ------------------------------------------------TTTEEEEEETTSSSEEEEEECTTCCEEEEEEE
T ss_pred ------------------------------------------------CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEe
Confidence 226899999988 4344432 2 567899999
Q ss_pred CCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEec
Q 005240 184 PDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQ 263 (706)
Q Consensus 184 pDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~ 263 (706)
|.+.+|+++.... ...|++.+++|...+.+..... ..+..+++.+++.. |||+...
T Consensus 523 p~~g~LYwtD~g~-----------~~~I~~~~~dG~~~~~lv~~~l------------~~P~GLavD~~~~~-LYwaD~~ 578 (791)
T 3m0c_C 523 PVHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENI------------QWPNGITLDLLSGR-LYWVDSK 578 (791)
T ss_dssp TTTTEEEEEECSS-----------SCEEEEEETTSCCEEEEECSSC------------SCEEEEEEETTTTE-EEEEETT
T ss_pred cCCCCEEEecCCC-----------CCeEEEEecCCCceEEEEeCCC------------CCceEEEEecCCCe-EEEEeCC
Confidence 9998998876432 2479999999988777655322 12346788888876 8887311
Q ss_pred cCCCCccccCccceeeeecCCCCCCCCceEEeeccccc-ccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 264 DRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRF-RSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
...|.++++ ++...+.+....... ..+..+.++..||++.+ ....|+++|..++
T Consensus 579 -----------~~~I~~~d~---dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~---~~~~I~~~dk~tG 633 (791)
T 3m0c_C 579 -----------LHSISSIDV---NGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTG 633 (791)
T ss_dssp -----------TTEEEEEET---TSCSCEEEEECTTTTSSEEEEEEETTEEEEEET---TTTEEEEEETTTC
T ss_pred -----------CCcEEEEec---CCCceEEEecCCCccCCCCEEEEeCCEEEEEEC---CCCEEEEEeCCCC
Confidence 135888888 676766665433222 22233345557777642 3457899987664
No 448
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=98.22 E-value=2.4e-05 Score=79.45 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=68.1
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH-CCeEEEEcCCCCcCCCCCCCCc---hhhHHHHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA-RRFAVLAGPSIPIIGEGDKLPN---DRFVEQLVSSAEAA 589 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~~~~~g~g~~~~~---~~~~~~~~~D~~~~ 589 (706)
|.||++||.+.. ...| ......|++ .+|.|+.++.+ |+|.+... ....+...+|+.+.
T Consensus 39 p~lvllHG~~~~-----------~~~w----~~~~~~L~~~~~~~via~Dl~---GhG~S~~~~~~~~~~~~~a~dl~~~ 100 (316)
T 3c5v_A 39 PVLLLLHGGGHS-----------ALSW----AVFTAAIISRVQCRIVALDLR---SHGETKVKNPEDLSAETMAKDVGNV 100 (316)
T ss_dssp CEEEEECCTTCC-----------GGGG----HHHHHHHHTTBCCEEEEECCT---TSTTCBCSCTTCCCHHHHHHHHHHH
T ss_pred cEEEEECCCCcc-----------cccH----HHHHHHHhhcCCeEEEEecCC---CCCCCCCCCccccCHHHHHHHHHHH
Confidence 678999996421 1111 123444554 28999996654 56665432 22467778899998
Q ss_pred HHHHHHcCCCCCCcEEEEEechHHHHHHHHHHh--CCCceeEEEeccC
Q 005240 590 VEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH--APHLFCCGIARSG 635 (706)
Q Consensus 590 ~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~--~p~~~~a~v~~~~ 635 (706)
++.+... + +.++.|+||||||.+++.++.+ .|+ ++++|..++
T Consensus 101 l~~l~~~--~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~ 144 (316)
T 3c5v_A 101 VEAMYGD--L-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDV 144 (316)
T ss_dssp HHHHHTT--C-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESC
T ss_pred HHHHhcc--C-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcc
Confidence 8887421 1 2689999999999999999996 576 888887653
No 449
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.22 E-value=1.4e-05 Score=90.32 Aligned_cols=202 Identities=10% Similarity=0.042 Sum_probs=120.4
Q ss_pred CCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCC----CceeecccCCCccccccccceEEecCCcEEEEE
Q 005240 29 DGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAET----GEAKPLFESPDICLNAVFGSFVWVNNSTLLIFT 104 (706)
Q Consensus 29 ~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~----g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~ 104 (706)
.......+.|+|++.+|+++. .....|+++++++ .....+.... +. .+..+++.+.+..||++
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD---------~~~~~I~~~~~~g~~~~~~~~~~i~~~---~~-~P~glavD~~~g~LY~t 470 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSD---------LSQRMICSTQLDRAHGVSSYDTVISRD---IQ-APDGLAVDWIHSNIYWT 470 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECC---------TTTTSBEEEESCCCCC-CCCCCBCCSC---C---CCCEECCCSSSBCEEC
T ss_pred cCcceEEEccccccCeEEEEe---------cCCCeEEEEecCCCCCCcceEEEEeCC---CC-CcceEEEEeeCCcEEEE
Confidence 334577889999999997753 2346799999876 2322222111 00 13455666555556654
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecCC-C-ceEeeee
Q 005240 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGT-P-AVYTAVE 181 (706)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt~-~-~~~~~~~ 181 (706)
-. ....|++++++| ..+.+.. . .....++
T Consensus 471 D~------------------------------------------------~~~~I~v~d~dg~~~~~l~~~~~~~P~gia 502 (699)
T 1n7d_A 471 DS------------------------------------------------VLGTVSVADTKGVKRKTLFREQGSKPRAIV 502 (699)
T ss_dssp CT------------------------------------------------TTSCEEEEBSSSCCEEEECCCSSCCCCCEE
T ss_pred ec------------------------------------------------cCCeEEEEecCCCceEEEEeCCCCCcceEE
Confidence 11 125788899977 4444433 2 4567889
Q ss_pred eCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEE
Q 005240 182 PSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVE 261 (706)
Q Consensus 182 ~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~ 261 (706)
++|++.+|+++.... ...|+++++++...+.+..... ..+..++|+|+++. |||+.
T Consensus 503 vDp~~g~ly~td~~~-----------~~~I~~~~~dG~~~~~l~~~~l------------~~PnGlavd~~~~~-LY~aD 558 (699)
T 1n7d_A 503 VDPVHGFMYWTDWGT-----------PAKIKKGGLNGVDIYSLVTENI------------QWPNGITLDLLSGR-LYWVD 558 (699)
T ss_dssp CCSSSSCCEECCCSS-----------SCCEEBCCSSSCCCCEESCSSC------------SSCCCEEECTTTCC-EEEEE
T ss_pred EccCCCcEEEcccCC-----------CCeEEEEeCCCCCeeEEEeCCC------------CCccEEEEeccCCE-EEEEe
Confidence 999998988765331 1478888888776555533221 11347899999887 88773
Q ss_pred eccCCCCccccCccceeeeecCCCCCCCCceEEeeccc---ccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 262 AQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL---RFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~---~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
.. ...|++++. ++...+.+..... ....+++ |+..|+++.+ ...+|++++..++
T Consensus 559 ~~-----------~~~I~~~d~---dG~~~~~~~~~~~~~~~P~glav--d~~~lywtd~---~~~~V~~~d~~~G 615 (699)
T 1n7d_A 559 SK-----------LHSISSIDV---NGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDI---INEAIFSANRLTG 615 (699)
T ss_dssp TT-----------TTEEEEECS---SSSCCEEECCCSSSCSSCCCCEE--ETTEEEEECS---TTTCEEEEETTTE
T ss_pred cC-----------CCeEEEEcc---CCCceEEEEecCCcCCCceEeEE--ECCEEEEEeC---CCCeEEEEEccCC
Confidence 21 235888888 5656665543221 1223333 4456676542 2346888887653
No 450
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=98.22 E-value=1.5e-05 Score=81.18 Aligned_cols=80 Identities=16% Similarity=0.012 Sum_probs=56.4
Q ss_pred HHHHHHCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC---C
Q 005240 548 SLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---P 624 (706)
Q Consensus 548 ~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~---p 624 (706)
+..| +.||.|+..+.+ |+|.+............|+...++.+. +..++.++||||||.+++.++.+. |
T Consensus 103 ~~~L-~~~~~v~~~d~~---G~G~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~lvGhS~Gg~vA~~~A~~~~~~~ 173 (319)
T 3lcr_A 103 AEEL-DAGRRVSALVPP---GFHGGQALPATLTVLVRSLADVVQAEV-----ADGEFALAGHSSGGVVAYEVARELEARG 173 (319)
T ss_dssp HHHH-CTTSEEEEEECT---TSSTTCCEESSHHHHHHHHHHHHHHHH-----TTSCEEEEEETHHHHHHHHHHHHHHHTT
T ss_pred HHHh-CCCceEEEeeCC---CCCCCCCCCCCHHHHHHHHHHHHHHhc-----CCCCEEEEEECHHHHHHHHHHHHHHhcC
Confidence 4444 789999885554 455443333345556666666655543 226899999999999999999887 7
Q ss_pred CceeEEEeccCC
Q 005240 625 HLFCCGIARSGS 636 (706)
Q Consensus 625 ~~~~a~v~~~~~ 636 (706)
++++++|...+.
T Consensus 174 ~~v~~lvl~~~~ 185 (319)
T 3lcr_A 174 LAPRGVVLIDSY 185 (319)
T ss_dssp CCCSCEEEESCC
T ss_pred CCccEEEEECCC
Confidence 889988887754
No 451
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=98.21 E-value=1.5e-05 Score=83.77 Aligned_cols=117 Identities=10% Similarity=0.001 Sum_probs=75.8
Q ss_pred CCeEEEEEEEecCCCCCCCCCCceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHH------CCeEEEEcCCC
Q 005240 491 DGVPLTATLYLPPGYDQSKDGPLPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLA------RRFAVLAGPSI 564 (706)
Q Consensus 491 dg~~i~~~l~~P~~~~~~~~~~~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~~ 564 (706)
+|..|+.....+.+ ++ .|.||++||.+.. ...+ ......|++ .||.|++++.+
T Consensus 93 ~g~~i~~~~~~~~~--~~----~~pllllHG~~~s-----------~~~~----~~~~~~L~~~~~~~~~gf~vv~~Dlp 151 (408)
T 3g02_A 93 EGLTIHFAALFSER--ED----AVPIALLHGWPGS-----------FVEF----YPILQLFREEYTPETLPFHLVVPSLP 151 (408)
T ss_dssp TTEEEEEEEECCSC--TT----CEEEEEECCSSCC-----------GGGG----HHHHHHHHHHCCTTTCCEEEEEECCT
T ss_pred CCEEEEEEEecCCC--CC----CCeEEEECCCCCc-----------HHHH----HHHHHHHhcccccccCceEEEEECCC
Confidence 89999988887643 11 3568889997521 1111 234556666 59999996654
Q ss_pred CcCCCCCCCCc----hhhHHHHHHHHHHHHHHHHHcCCCCCC-cEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 565 PIIGEGDKLPN----DRFVEQLVSSAEAAVEEVVRRGVADPS-RIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 565 ~~~g~g~~~~~----~~~~~~~~~D~~~~~~~l~~~~~id~~-~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
|+|.+... ........+|+...++.+ + -+ ++.+.|||+||.+++.++.++|+++...+..++..
T Consensus 152 ---G~G~S~~~~~~~~~~~~~~a~~~~~l~~~l---g---~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~ 220 (408)
T 3g02_A 152 ---GYTFSSGPPLDKDFGLMDNARVVDQLMKDL---G---FGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMS 220 (408)
T ss_dssp ---TSTTSCCSCSSSCCCHHHHHHHHHHHHHHT---T---CTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCC
T ss_pred ---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C---CCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCC
Confidence 55555332 122444555555544432 2 34 89999999999999999999987776666655443
No 452
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=97.51 E-value=1.9e-07 Score=94.09 Aligned_cols=99 Identities=11% Similarity=0.096 Sum_probs=67.7
Q ss_pred eEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCc-------hhhHHHHHHHH
Q 005240 514 PCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPN-------DRFVEQLVSSA 586 (706)
Q Consensus 514 p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~-------~~~~~~~~~D~ 586 (706)
|.||++||.+.. ...+ ...+..|+ .||.|+..+.+ |+|.+... ........+|+
T Consensus 26 p~vv~lHG~~~~-----------~~~~----~~~~~~l~-~g~~v~~~D~~---G~G~s~~~~~~~~~~~~~~~~~~~~l 86 (304)
T 3b12_A 26 PALLLLHGFPQN-----------LHMW----ARVAPLLA-NEYTVVCADLR---GYGGSSKPVGAPDHANYSFRAMASDQ 86 (304)
Confidence 679999996421 1111 12344455 89999986655 45555332 11233445666
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCC
Q 005240 587 EAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSY 637 (706)
Q Consensus 587 ~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~ 637 (706)
.++++++ +.+++.++|||+||.+++.++.++|++++++|+.++..
T Consensus 87 ~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (304)
T 3b12_A 87 RELMRTL------GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIP 131 (304)
Confidence 6665554 34689999999999999999999999999999998754
No 453
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.19 E-value=0.00039 Score=68.88 Aligned_cols=182 Identities=14% Similarity=0.013 Sum_probs=106.6
Q ss_pred CCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccc
Q 005240 59 SCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (706)
Q Consensus 59 ~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (706)
.+...|+++|.++|+...-...... ..+....++|||+.|+ ...
T Consensus 12 ~~~~~v~~~d~~tG~~~w~~~~~~~---~~~~~~~~~pdG~ilv-s~~-------------------------------- 55 (276)
T 3no2_A 12 SGWNKIAIINKDTKEIVWEYPLEKG---WECNSVAATKAGEILF-SYS-------------------------------- 55 (276)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCTT---CCCCEEEECTTSCEEE-ECB--------------------------------
T ss_pred CCCCEEEEEECCCCeEEEEeCCCcc---CCCcCeEECCCCCEEE-eCC--------------------------------
Confidence 4457889999977765433222210 1256778999999766 311
Q ss_pred hhccCCchhhhhhhhcccceEEEEccCC-CceecCCC--ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEe
Q 005240 139 DNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFGTP--AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWT 215 (706)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt~~--~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~ 215 (706)
..++.+|.+| ...++..+ ..+..+.++|||+.|+..... ...++.++
T Consensus 56 ------------------~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~------------~~~v~~vd 105 (276)
T 3no2_A 56 ------------------KGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGH------------PSTILEVN 105 (276)
T ss_dssp ------------------SEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST------------TEEEEEEC
T ss_pred ------------------CCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCC------------CCEEEEEe
Confidence 3566677766 33333332 356678899999988755431 13678888
Q ss_pred cCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEe
Q 005240 216 TDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH 295 (706)
Q Consensus 216 ~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~ 295 (706)
.+|+.+.++.-..... .+. ...+.+...+||.. |+ .. . ....|+.+|. + |+...-.
T Consensus 106 ~~Gk~l~~~~~~~~~~-~~~------~~~~~v~~~~~G~~-lv-~~-~----------~~~~v~~~d~---~-G~~~w~~ 161 (276)
T 3no2_A 106 MKGEVLSKTEFETGIE-RPH------AQFRQINKNKKGNY-LV-PL-F----------ATSEVREIAP---N-GQLLNSV 161 (276)
T ss_dssp TTSCEEEEEEECCSCS-SGG------GSCSCCEECTTSCE-EE-EE-T----------TTTEEEEECT---T-SCEEEEE
T ss_pred CCCCEEEEEeccCCCC-ccc------ccccCceECCCCCE-EE-Ee-c----------CCCEEEEECC---C-CCEEEEE
Confidence 8887666654321110 010 11234567888884 33 31 1 1235788887 5 5544433
Q ss_pred ecccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 296 KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 296 ~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
............++|..++... ...+|+.+|++++
T Consensus 162 ~~~~~~~~~~~~~~g~~~v~~~----~~~~v~~~d~~tG 196 (276)
T 3no2_A 162 KLSGTPFSSAFLDNGDCLVACG----DAHCFVQLNLESN 196 (276)
T ss_dssp ECSSCCCEEEECTTSCEEEECB----TTSEEEEECTTTC
T ss_pred ECCCCccceeEcCCCCEEEEeC----CCCeEEEEeCcCC
Confidence 3333445566788998777643 2346999999974
No 454
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.15 E-value=6.1e-06 Score=87.40 Aligned_cols=83 Identities=10% Similarity=-0.042 Sum_probs=60.5
Q ss_pred HHCCeEEEEcCCCCcCCCCCCCCch--hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeE
Q 005240 552 LARRFAVLAGPSIPIIGEGDKLPND--RFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCC 629 (706)
Q Consensus 552 ~~~G~~v~~~~~~~~~g~g~~~~~~--~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a 629 (706)
.+.+|.|+..+.+ |+|.+.... .......+++...+++|.++.-++.+++.++|||+||++|+.++.+.|++++.
T Consensus 96 ~~~~~~VI~vD~~---g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~ 172 (449)
T 1hpl_A 96 KVESVNCICVDWK---SGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGR 172 (449)
T ss_dssp HHCCEEEEEEECH---HHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSE
T ss_pred hcCCeEEEEEeCC---cccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcce
Confidence 4579999986654 344432111 12334567788888888754335678999999999999999999999999999
Q ss_pred EEeccCCC
Q 005240 630 GIARSGSY 637 (706)
Q Consensus 630 ~v~~~~~~ 637 (706)
++...|..
T Consensus 173 iv~Ldpa~ 180 (449)
T 1hpl_A 173 ITGLDPAE 180 (449)
T ss_dssp EEEESCBC
T ss_pred eeccCccc
Confidence 98877653
No 455
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.14 E-value=0.0007 Score=75.31 Aligned_cols=221 Identities=13% Similarity=0.051 Sum_probs=139.8
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
.+|...+|+. .....+.-++.......+.|+|++.+|+++. .....|+.++++++..+.+......
T Consensus 15 ~~I~~i~l~~----~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD---------~~~~~I~r~~~~g~~~~~v~~~g~~- 80 (628)
T 4a0p_A 15 ADIRRISLET----NNNNVAIPLTGVKEASALDFDVTDNRIYWTD---------ISLKTISRAFMNGSALEHVVEFGLD- 80 (628)
T ss_dssp TEEEEEESSC----TTCEEECCCCSCSCEEEEEEETTTTEEEEEE---------TTTTEEEEEETTSCSCEEEECSSCS-
T ss_pred CcEEEEECCC----CCcceEEEcCCCCceEEEEEECCCCEEEEEE---------CCCCeEEEEECCCCCcEEEEeCCCC-
Confidence 3566666754 3333332122223566789999999997764 3346899999988766655432211
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
.+..++..+.++.||++-. ....|.++++
T Consensus 81 ---~P~GlAvD~~~~~LY~tD~------------------------------------------------~~~~I~v~~~ 109 (628)
T 4a0p_A 81 ---YPEGMAVDWLGKNLYWADT------------------------------------------------GTNRIEVSKL 109 (628)
T ss_dssp ---CCCEEEEETTTTEEEEEET------------------------------------------------TTTEEEEEET
T ss_pred ---CcceEEEEeCCCEEEEEEC------------------------------------------------CCCEEEEEec
Confidence 1556778778888887621 1268999999
Q ss_pred CC-CceecC-CC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccC
Q 005240 165 DG-TAKDFG-TP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVR 241 (706)
Q Consensus 165 ~g-~~~~lt-~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~ 241 (706)
+| ..+.|. .. .....+++.|...+|+++.... ...|++.+++|...+.+...-
T Consensus 110 dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~-----------~~~I~r~~~dG~~~~~l~~~~------------- 165 (628)
T 4a0p_A 110 DGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG-----------KPKIDRAAMDGSERTTLVPNV------------- 165 (628)
T ss_dssp TSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSS-----------SCEEEEEETTSCSCEEEECSC-------------
T ss_pred CCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC-----------CCEEEEEeCCCCceEEEECCC-------------
Confidence 88 333443 33 5678999999888898876432 248999999998877765321
Q ss_pred CCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccc
Q 005240 242 EGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKT 321 (706)
Q Consensus 242 ~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~ 321 (706)
..+..++++++++. |||+.. ..+.|+.++. +++..+.+...-.....++.. +..|+++.+
T Consensus 166 ~~P~GlalD~~~~~-LY~aD~-----------~~~~I~~~d~---dG~~~~v~~~~l~~P~glav~--~~~ly~tD~--- 225 (628)
T 4a0p_A 166 GRANGLTIDYAKRR-LYWTDL-----------DTNLIESSNM---LGLNREVIADDLPHPFGLTQY--QDYIYWTDW--- 225 (628)
T ss_dssp SSEEEEEEETTTTE-EEEEET-----------TTTEEEEEET---TSCSCEEEEECCSCEEEEEEE--TTEEEEEET---
T ss_pred CCcceEEEccccCE-EEEEEC-----------CCCEEEEEcC---CCCceEEeeccCCCceEEEEE--CCEEEEecC---
Confidence 12347889998887 888742 1235888888 565555444332333344443 346676542
Q ss_pred cceEEEEEcCCCC
Q 005240 322 SQTRTWLVCPGSK 334 (706)
Q Consensus 322 ~~~~l~~~d~~~~ 334 (706)
....|+++|..++
T Consensus 226 ~~~~I~~~dk~tg 238 (628)
T 4a0p_A 226 SRRSIERANKTSG 238 (628)
T ss_dssp TTTEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 3446899997665
No 456
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=98.11 E-value=4.5e-05 Score=74.12 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC-----ceeEEEeccCCCC
Q 005240 580 EQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH-----LFCCGIARSGSYN 638 (706)
Q Consensus 580 ~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~-----~~~a~v~~~~~~d 638 (706)
....+++..+++++.++.. .+++.++||||||.+++.++.++|+ +++.+|+.++.++
T Consensus 77 ~~~~~~l~~~i~~l~~~~~--~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~ 138 (249)
T 3fle_A 77 KENAYWIKEVLSQLKSQFG--IQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYN 138 (249)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccC
Confidence 4456778888888877633 3689999999999999999998864 7999999987664
No 457
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.09 E-value=0.00098 Score=67.10 Aligned_cols=247 Identities=12% Similarity=0.083 Sum_probs=126.2
Q ss_pred CCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCC
Q 005240 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNS 98 (706)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg 98 (706)
...+.+..+|.+.....++|+|||+ |+++. .....|++++.+++....+. ... .+..+++++||
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~~g~-lyv~d---------~~~~~I~~~d~~g~~~~~~~-~~~-----~p~gia~~~dG 83 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAPDGT-IFVTN---------HEVGEIVSITPDGNQQIHAT-VEG-----KVSGLAFTSNG 83 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECTTSC-EEEEE---------TTTTEEEEECTTCCEEEEEE-CSS-----EEEEEEECTTS
T ss_pred CCceEeEeCCCCCCcceEEECCCCC-EEEEe---------CCCCeEEEECCCCceEEEEe-CCC-----CceeEEEcCCC
Confidence 4556666677666677899999997 54542 23467999998875443332 222 25678899999
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCCceecCCC---
Q 005240 99 TLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGTAKDFGTP--- 174 (706)
Q Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~~~~lt~~--- 174 (706)
+ |++.... . ....|+.++. +|+.+.+...
T Consensus 84 ~-l~vad~~-~---------------------------------------------~~~~v~~~d~~~g~~~~~~~~~~~ 116 (306)
T 2p4o_A 84 D-LVATGWN-A---------------------------------------------DSIPVVSLVKSDGTVETLLTLPDA 116 (306)
T ss_dssp C-EEEEEEC-T---------------------------------------------TSCEEEEEECTTSCEEEEEECTTC
T ss_pred c-EEEEecc-C---------------------------------------------CcceEEEEcCCCCeEEEEEeCCCc
Confidence 8 4443210 0 0135777775 5655544321
Q ss_pred ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEc-ccCCCCCCCCcccCccCCCCcceeeecCC
Q 005240 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVREL-CDLPPAEDIPVCYNSVREGMRSISWRADK 253 (706)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~~~~~p~~~~~~~~g~~~~~~spdg 253 (706)
.....++..+++ .+++.... ...|++++.+++..+.. .........+..-. .....+ +||+
T Consensus 117 ~~~~g~~~~~~~-~~~v~d~~------------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~---~~pngi--s~dg 178 (306)
T 2p4o_A 117 IFLNGITPLSDT-QYLTADSY------------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVF---PAANGL--KRFG 178 (306)
T ss_dssp SCEEEEEESSSS-EEEEEETT------------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCS---CSEEEE--EEET
T ss_pred cccCcccccCCC-cEEEEECC------------CCeEEEEeCCCCcEeEEEECCccccccccCCC---CcCCCc--CcCC
Confidence 223344445554 45443322 24789999876432211 01000000000000 011234 8998
Q ss_pred CceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc--eEEeecccccccceecCCCceEEEEeeccccceEEEEEcC
Q 005240 254 PSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP--EILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (706)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~--~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (706)
+. ||+.. . ....|++++.+. .+.. ..+.........+++.+||. |+++. . ...+|++++.
T Consensus 179 ~~-lyv~d-~----------~~~~I~~~~~~~--~g~~~~~~~~~~~~~P~gi~vd~dG~-l~va~-~--~~~~V~~~~~ 240 (306)
T 2p4o_A 179 NF-LYVSN-T----------EKMLLLRIPVDS--TDKPGEPEIFVEQTNIDDFAFDVEGN-LYGAT-H--IYNSVVRIAP 240 (306)
T ss_dssp TE-EEEEE-T----------TTTEEEEEEBCT--TSCBCCCEEEEESCCCSSEEEBTTCC-EEEEC-B--TTCCEEEECT
T ss_pred CE-EEEEe-C----------CCCEEEEEEeCC--CCCCCccEEEeccCCCCCeEECCCCC-EEEEe-C--CCCeEEEECC
Confidence 76 76552 2 123578888731 1332 12222223456788899996 43332 2 2346889997
Q ss_pred CCCCCCceeeecCcccccccCCCCCceEec---cCCCEEEEee
Q 005240 332 GSKDVAPRVLFDRVFENVYSDPGSPMMTRT---STGTNVIAKI 371 (706)
Q Consensus 332 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s---~dg~~l~~~~ 371 (706)
++ +...+...... . .....+++. +|+++|++..
T Consensus 241 ~G---~~~~~~~~~~~--~--~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 241 DR---STTIIAQAEQG--V--IGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp TC---CEEEEECGGGT--C--TTEEEEEECCSTTTTTEEEEEE
T ss_pred CC---CEEEEeecccc--c--CCceEEEEecccCCCCEEEEEC
Confidence 64 22222111100 0 011135566 7888887765
No 458
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.09 E-value=7.7e-06 Score=83.34 Aligned_cols=88 Identities=13% Similarity=0.082 Sum_probs=61.6
Q ss_pred hHHHHHHHCCeE---EEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHH
Q 005240 546 TSSLIFLARRFA---VLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLL 620 (706)
Q Consensus 546 ~~~~~l~~~G~~---v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~ 620 (706)
.+...|.++||. |+..+.++ +|.+... .......++++.+.++.+.++. ..++|.|+||||||.+++.++
T Consensus 72 ~l~~~L~~~Gy~~~~V~~~D~~g---~G~S~~~~~~~~~~~~~~~l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a 146 (342)
T 2x5x_A 72 SVYAELKARGYNDCEIFGVTYLS---SSEQGSAQYNYHSSTKYAIIKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATL 146 (342)
T ss_dssp CHHHHHHHTTCCTTSEEEECCSC---HHHHTCGGGCCBCHHHHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEEEeCCC---CCccCCccccCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHH
Confidence 456778889998 88756543 2222111 0112334666667777776642 236899999999999999999
Q ss_pred HhC--CCceeEEEeccCCCC
Q 005240 621 AHA--PHLFCCGIARSGSYN 638 (706)
Q Consensus 621 ~~~--p~~~~a~v~~~~~~d 638 (706)
.++ |++++.+|+.++...
T Consensus 147 ~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 147 QYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHTCGGGEEEEEEESCCTT
T ss_pred HHcCchhhhcEEEEECCCcc
Confidence 998 899999999997654
No 459
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.08 E-value=0.00059 Score=75.82 Aligned_cols=180 Identities=12% Similarity=0.070 Sum_probs=115.9
Q ss_pred ceeEEEEEcCCCc--eeecccCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccc
Q 005240 61 KLRVWIADAETGE--AKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMT 138 (706)
Q Consensus 61 ~~~l~~~d~~~g~--~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (706)
..+|.++++++.. ...+...... ...++|++++..||++-.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~-----~~~ld~~~~~~~ly~sD~-------------------------------- 59 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLED-----AAAVDFVFSHGLIYWSDV-------------------------------- 59 (619)
T ss_dssp SSBEEEECCC---------CBCCSC-----EEEEEEETTTTEEEEEET--------------------------------
T ss_pred cccEEEEeCCCCcceEEEEEcCCCc-----eEEEEEEeCCCEEEEEEC--------------------------------
Confidence 4789999998753 2222211111 457789998888887621
Q ss_pred hhccCCchhhhhhhhcccceEEEEccCCC---ceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEE
Q 005240 139 DNLLKDEYDESLFDYYTTAQLVLGSLDGT---AKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVW 214 (706)
Q Consensus 139 ~~~~~~~~d~~~~~~~~~~~l~~~~l~g~---~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~ 214 (706)
....|++++++|. ...+..+ .....+++.+.++.|+++... ...|.+.
T Consensus 60 ----------------~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~------------~~~I~v~ 111 (619)
T 3s94_A 60 ----------------SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE------------TNRIEVS 111 (619)
T ss_dssp ----------------TTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred ----------------CCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCC------------CCEEEEE
Confidence 1257888888773 2233444 567889999999999887644 2589999
Q ss_pred ecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEE
Q 005240 215 TTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEIL 294 (706)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 294 (706)
+++|+..+.|..... ..++.++..|.+.. |||... +. ...|++.+. +|...+.+
T Consensus 112 ~~dG~~~~~l~~~~l------------~~P~~Iavdp~~g~-ly~tD~---g~-------~~~I~r~~~---dG~~~~~l 165 (619)
T 3s94_A 112 NLDGSLRKVLFWQEL------------DQPRAIALDPSSGF-MYWTDW---GE-------VPKIERAGM---DGSSRFII 165 (619)
T ss_dssp ETTSCSCEEEECSSC------------SCCCCEEEETTTTE-EEEEEC---SS-------SCEEEEEET---TSCSCEEE
T ss_pred ECCCCCEEEEEeCCC------------CCCceEEEecCCCe-EEEecc---CC-------CCEEEEEEC---CCCceEEE
Confidence 999887776654322 23568899998766 887731 11 135888887 66666666
Q ss_pred ee-cccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 295 HK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 295 ~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
.. .-.....++..++++.|+++.. ....|+++|+++.
T Consensus 166 ~~~~~~~P~Glald~~~~~LY~aD~---~~~~I~~~~~dG~ 203 (619)
T 3s94_A 166 INSEIYWPNGLTLDYEEQKLYWADA---KLNFIHKSNLDGT 203 (619)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEET---TTCCEEEESSSCC
T ss_pred EeCCCCCCcEEEEEccCCEEEEEeC---CCCeEEEecCCCC
Confidence 53 2334567789998888988742 3457999999884
No 460
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.08 E-value=0.0092 Score=59.09 Aligned_cols=193 Identities=14% Similarity=0.075 Sum_probs=109.0
Q ss_pred CcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 005240 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (706)
Q Consensus 31 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~ 110 (706)
.....+.++|||+ |+++. .....|.+++.+ ++...+..... ...+..+.++++|+. ++...
T Consensus 20 ~~p~~i~~d~~g~-l~v~~---------~~~~~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~g~l-~v~~~---- 80 (300)
T 2qc5_A 20 SGPYGITSSEDGK-VWFTQ---------HKANKISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSLGDI-WFTEN---- 80 (300)
T ss_dssp CCEEEEEECTTSC-EEEEE---------TTTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSCE-EEEET----
T ss_pred CCcceeeECCCCC-EEEEc---------CCCCeEEEECCC-CceEEEECCCC---CCcceeEEECCCCCE-EEEec----
Confidence 3567788999997 33332 234689999987 66555432111 012567788899974 44321
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCCceecCC--C-ceEeeeeeCCCCc
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGT--P-AVYTAVEPSPDQK 187 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~~~~lt~--~-~~~~~~~~SpDG~ 187 (706)
....|++++.+|+.+.+.. . ..+..++++|+|+
T Consensus 81 --------------------------------------------~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~ 116 (300)
T 2qc5_A 81 --------------------------------------------GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGD 116 (300)
T ss_dssp --------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTC
T ss_pred --------------------------------------------CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCC
Confidence 1156888887775443322 2 4577888999986
Q ss_pred EEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCC
Q 005240 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (706)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~ 267 (706)
|++.... ...|++++.+ ++.+.+... ... ..+..+.+.++|+ |++.. ..
T Consensus 117 -l~v~~~~------------~~~i~~~~~~-g~~~~~~~~-~~~----------~~~~~i~~d~~g~--l~v~~-~~--- 165 (300)
T 2qc5_A 117 -IWFTQLN------------GDRIGKLTAD-GTIYEYDLP-NKG----------SYPAFITLGSDNA--LWFTE-NQ--- 165 (300)
T ss_dssp -EEEEETT------------TTEEEEECTT-SCEEEEECS-STT----------CCEEEEEECTTSS--EEEEE-TT---
T ss_pred -EEEEccC------------CCeEEEECCC-CCEEEccCC-CCC----------CCceeEEECCCCC--EEEEe-cC---
Confidence 4444432 1378889888 444433211 010 1234678888886 65442 11
Q ss_pred CccccCccceeeeecCCCCCCCCceEEee--cccccccceecCCCceEEEEeeccccceEEEEEcCC
Q 005240 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (706)
Q Consensus 268 ~~~~~~~~~~l~~~d~~~~~~~~~~~l~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (706)
...|++++. + ++...+.. .......+.+.++|. |++.. . ....|++++.+
T Consensus 166 -------~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~-~--~~~~i~~~~~~ 217 (300)
T 2qc5_A 166 -------NNSIGRITN---T-GKLEEYPLPTNAAAPVGITSGNDGA-LWFVE-I--MGNKIGRITTT 217 (300)
T ss_dssp -------TTEEEEECT---T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEE-T--TTTEEEEECTT
T ss_pred -------CCeEEEECC---C-CcEEEeeCCCCCCCcceEEECCCCC-EEEEc-c--CCCEEEEEcCC
Confidence 124777765 2 34443321 123455677888886 44432 1 23468999984
No 461
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.05 E-value=7.4e-06 Score=86.74 Aligned_cols=85 Identities=11% Similarity=0.032 Sum_probs=60.1
Q ss_pred HHHHH-CCeEEEEcCCCCcCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC
Q 005240 549 LIFLA-RRFAVLAGPSIPIIGEGDKLPN--DRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 625 (706)
Q Consensus 549 ~~l~~-~G~~v~~~~~~~~~g~g~~~~~--~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~ 625 (706)
..|++ .+|.|+..+.++ .|..... ........+|+...+++|.++.-++.+++.|+||||||++|+.++.+.|+
T Consensus 93 ~~ll~~~~~~VI~vD~~g---~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~ 169 (450)
T 1rp1_A 93 KNMFKVEEVNCICVDWKK---GSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG 169 (450)
T ss_dssp HHHTTTCCEEEEEEECHH---HHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT
T ss_pred HHHHhcCCeEEEEEeCcc---ccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC
Confidence 33444 489999866653 3333211 11234456788888888865433566899999999999999999999998
Q ss_pred ceeEEEeccCCC
Q 005240 626 LFCCGIARSGSY 637 (706)
Q Consensus 626 ~~~a~v~~~~~~ 637 (706)
++.++...|..
T Consensus 170 -v~~iv~Ldpa~ 180 (450)
T 1rp1_A 170 -LGRITGLDPVE 180 (450)
T ss_dssp -CCEEEEESCCC
T ss_pred -cccccccCccc
Confidence 99988777653
No 462
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.04 E-value=0.001 Score=66.02 Aligned_cols=120 Identities=13% Similarity=0.184 Sum_probs=70.8
Q ss_pred ceEEEEccCCC-ceecCC--C-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCC
Q 005240 157 AQLVLGSLDGT-AKDFGT--P-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAED 232 (706)
Q Consensus 157 ~~l~~~~l~g~-~~~lt~--~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~ 232 (706)
..|++++.+|+ ...+.. . ..+..++++|||+ |+++... ...|++|+.++.....+... +..
T Consensus 142 ~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~------------~~~i~~~~~~g~~~~~~~~~-g~~- 206 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR------------AHCVKVFNYEGQYLRQIGGE-GIT- 206 (286)
T ss_dssp TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG------------GTEEEEEETTCCEEEEESCT-TTS-
T ss_pred CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC------------CCEEEEEcCCCCEEEEEccC-Ccc-
Confidence 57888887773 333321 2 4577899999997 5554432 24799999988766655322 110
Q ss_pred CCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeeccc--ccccceecCCC
Q 005240 233 IPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDL--RFRSVSWCDDS 310 (706)
Q Consensus 233 ~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~~~~wspDg 310 (706)
..+..+++++||+ |++.. ... ...|.+++. ++.....+..... ....++++|||
T Consensus 207 ---------~~p~~i~~d~~G~--l~v~~-~~~---------~~~i~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 207 ---------NYPIGVGINSNGE--ILIAD-NHN---------NFNLTIFTQ---DGQLISALESKVKHAQCFDVALMDDG 262 (286)
T ss_dssp ---------CSEEEEEECTTCC--EEEEE-CSS---------SCEEEEECT---TSCEEEEEEESSCCSCEEEEEEETTT
T ss_pred ---------CCCcEEEECCCCC--EEEEe-CCC---------CEEEEEECC---CCCEEEEEcccCCCCcceeEEECCCC
Confidence 1234778999985 55442 111 014778876 4444444443222 24578899999
Q ss_pred ceEEEE
Q 005240 311 LALVNE 316 (706)
Q Consensus 311 ~~l~~~ 316 (706)
+ |+++
T Consensus 263 ~-l~vs 267 (286)
T 1q7f_A 263 S-VVLA 267 (286)
T ss_dssp E-EEEE
T ss_pred c-EEEE
Confidence 7 4444
No 463
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.99 E-value=0.00045 Score=76.74 Aligned_cols=202 Identities=15% Similarity=0.110 Sum_probs=124.4
Q ss_pred CCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCce-eecccCCCccccccccceEEecCCcEEEEEecCC
Q 005240 30 GAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSS 108 (706)
Q Consensus 30 ~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~ 108 (706)
......+.|+|++.+|+++. -....|+.+++++... ..+.... +. .+..++..+.++.||++-.
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD---------~~~~~I~r~~~~g~~~~~~v~~~~---~~-~P~GlAvD~~~~~ly~~d~-- 103 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSD---------VSEEAIKRTEFNKTESVQNVVVSG---LL-SPDGLACDWLGEKLYWTDS-- 103 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEE---------TTTTEEEEEEC-----CEEEECSS---CS-CEEEEEEETTTTEEEEEET--
T ss_pred CCceEEEEEEeCCCEEEEEE---------CCCCeEEEEEccCCCceEEEEeCC---CC-CcCeEEEEecCCEEEEEeC--
Confidence 33566788999999997763 3346899999887632 2222111 11 1567888888888887631
Q ss_pred CCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecC-CC-ceEeeeeeCCC
Q 005240 109 RRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TP-AVYTAVEPSPD 185 (706)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt-~~-~~~~~~~~SpD 185 (706)
....|.+++++| ..+.|. .. .....+++.|.
T Consensus 104 ----------------------------------------------~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~ 137 (619)
T 3s94_A 104 ----------------------------------------------ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPS 137 (619)
T ss_dssp ----------------------------------------------TTTEEEEEETTSCSCEEEECSSCSCCCCEEEETT
T ss_pred ----------------------------------------------CCCEEEEEECCCCCEEEEEeCCCCCCceEEEecC
Confidence 126899999988 334443 23 56778999999
Q ss_pred CcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccC
Q 005240 186 QKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDR 265 (706)
Q Consensus 186 G~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~ 265 (706)
+.+|+++.... ...|++.+++|...+.+..... ..+..++.+++++. |||+...
T Consensus 138 ~g~ly~tD~g~-----------~~~I~r~~~dG~~~~~l~~~~~------------~~P~Glald~~~~~-LY~aD~~-- 191 (619)
T 3s94_A 138 SGFMYWTDWGE-----------VPKIERAGMDGSSRFIIINSEI------------YWPNGLTLDYEEQK-LYWADAK-- 191 (619)
T ss_dssp TTEEEEEECSS-----------SCEEEEEETTSCSCEEEECSSC------------SSEEEEEEETTTTE-EEEEETT--
T ss_pred CCeEEEeccCC-----------CCEEEEEECCCCceEEEEeCCC------------CCCcEEEEEccCCE-EEEEeCC--
Confidence 88998886432 2479999999887777654321 12347889998877 8887321
Q ss_pred CCCccccCccceeeeecCCCCCCCCceEEee-cccccccceecCCCceEEEEeeccccceEEEEEcCCCCC
Q 005240 266 GDANVEVSPRDIIYTQPAEPAEGEKPEILHK-LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (706)
Q Consensus 266 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~ 335 (706)
.+.|+.++. ++...+.+.. .......+++..| .|+++.+ ....|+++|..+++
T Consensus 192 ---------~~~I~~~~~---dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~---~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 192 ---------LNFIHKSNL---DGTNRQAVVKGSLPHPFALTLFED--ILYWTDW---STHSILACNKYTGE 245 (619)
T ss_dssp ---------TCCEEEESS---SCCEEC---------CCCEEESSS--EEEEECT---TTCSEEEEESSSCC
T ss_pred ---------CCeEEEecC---CCCccEEEEeCCCCCceEEEEeCC--EEEEecC---CCCEEEEEECCCCc
Confidence 124888888 5655555543 2233345566555 6776543 34468999987753
No 464
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.95 E-value=0.0016 Score=66.78 Aligned_cols=235 Identities=9% Similarity=0.024 Sum_probs=119.9
Q ss_pred CCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccC---CCccccccccceEEe
Q 005240 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFES---PDICLNAVFGSFVWV 95 (706)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~---~~~~~~~~~~~~~wS 95 (706)
|+.+.+.... .....++++|||+.++-.... . .+...||.++ .++.+++... ....+. .+..++++
T Consensus 7 g~~~~v~~~~--~~p~~va~~~~g~~~v~~~~~----~--~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~-~p~gv~~d 75 (343)
T 2qe8_A 7 DRLEVVAELS--LAPGNITLTPDGRLFLSLHQF----Y--QPEMQVAELT--QDGLIPFPPQSGNAIITFD-TVLGIKSD 75 (343)
T ss_dssp -CCEEEEEES--SCEEEEEECTTSCEEEEECGG----G--CCSCSEEEEE--TTEEEESCCCCSSCCCCCS-CEEEEEEC
T ss_pred ceeEEEEEcC--CCcceEEECCCCCEEEEeCCC----C--CCceEEEEEC--CCCeecCCCcccCccccee-EeeEEEEc
Confidence 4555565433 357789999999754332111 0 1225899888 5555544211 100111 25577899
Q ss_pred cCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CCC-ceecCC
Q 005240 96 NNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DGT-AKDFGT 173 (706)
Q Consensus 96 pDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g~-~~~lt~ 173 (706)
++|+ |++.-.. ... .....|+++|+ +|+ .+.+..
T Consensus 76 ~~g~-L~v~D~g-~~~------------------------------------------~~~~~i~~~d~~tg~~~~~~~~ 111 (343)
T 2qe8_A 76 GNGI-VWMLDNG-NQS------------------------------------------KSVPKLVAWDTLNNQLSRVIYL 111 (343)
T ss_dssp SSSE-EEEEECH-HHH------------------------------------------TSCCEEEEEETTTTEEEEEEEC
T ss_pred CCCc-EEEEcCC-CCc------------------------------------------CCCCeEEEEECCCCeEEEEEEC
Confidence 9987 4443110 000 01257888888 564 333321
Q ss_pred C-------ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCC-CCCCCC--cccCc----
Q 005240 174 P-------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLP-PAEDIP--VCYNS---- 239 (706)
Q Consensus 174 ~-------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~~~~~p--~~~~~---- 239 (706)
. .....++++|++..++++...... ...|+++++++++..++.... .....+ .....
T Consensus 112 ~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~---------~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~ 182 (343)
T 2qe8_A 112 PPPITLSNSFVNDLAVDLIHNFVYISDPAPDD---------KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQ 182 (343)
T ss_dssp CTTTSCTTCCCCEEEEETTTTEEEEEECCSGG---------GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECB
T ss_pred ChhhcccccccceEEEecCCCEEEEEcCccCC---------CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEE
Confidence 1 234688899987787766541100 247999999866555543221 100000 00000
Q ss_pred ----------cCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc--e------EEeeccccc
Q 005240 240 ----------VREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP--E------ILHKLDLRF 301 (706)
Q Consensus 240 ----------~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~--~------~l~~~~~~~ 301 (706)
...+...++|||||+. ||+.. ..+ ..||.++.+.+..+.. . .........
T Consensus 183 ~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~-~~~----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~p 250 (343)
T 2qe8_A 183 IGQPDGTVIRPHLGVNGIVLDAENEW-LYLSP-MHS----------TSMYRIKSADLSNLQLTDAELGSKIERYSEKPIC 250 (343)
T ss_dssp EECTTSCEECCCCCEEEEEECTTSCE-EEEEE-SSC----------SEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSC
T ss_pred eccCCCceeceecccceeEeccCCCE-EEEEe-CCC----------CeEEEEEHHHhcCCCCChhhhhcceEecccCCCC
Confidence 0023346899999987 77653 211 1366665311011110 0 111223355
Q ss_pred ccceecCCCceEEEEeeccccceEEEEEcCCC
Q 005240 302 RSVSWCDDSLALVNETWYKTSQTRTWLVCPGS 333 (706)
Q Consensus 302 ~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~ 333 (706)
..+++++||. |+++. . ....|+++|.++
T Consensus 251 dgia~d~~G~-l~va~-~--~~~~V~~~d~~~ 278 (343)
T 2qe8_A 251 DGISIDKDHN-IYVGD-L--AHSAIGVITSAD 278 (343)
T ss_dssp SCEEECTTCC-EEEEE-G--GGTEEEEEETTT
T ss_pred ceEEECCCCC-EEEEc-c--CCCeEEEEECCC
Confidence 6788999986 44332 2 234699999843
No 465
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.93 E-value=0.0014 Score=64.74 Aligned_cols=80 Identities=11% Similarity=-0.046 Sum_probs=49.4
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
..|++.|.++ |+..--...........+.++|||+.|+ .. ...|+.+|.++....++......
T Consensus 15 ~~v~~~d~~t----G~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~-----------~~~V~~~d~~G~~~W~~~~~~~~- 77 (276)
T 3no2_A 15 NKIAIINKDT----KEIVWEYPLEKGWECNSVAATKAGEILF-SY-----------SKGAKMITRDGRELWNIAAPAGC- 77 (276)
T ss_dssp SEEEEEETTT----TEEEEEEECCTTCCCCEEEECTTSCEEE-EC-----------BSEEEEECTTSCEEEEEECCTTC-
T ss_pred CEEEEEECCC----CeEEEEeCCCccCCCcCeEECCCCCEEE-eC-----------CCCEEEECCCCCEEEEEcCCCCc-
Confidence 4577777755 6554332222213577889999998776 22 14688899855445555422111
Q ss_pred ccccccceEEecCCcEEEEE
Q 005240 85 LNAVFGSFVWVNNSTLLIFT 104 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~ 104 (706)
.+....++|||+.|+..
T Consensus 78 ---~~~~~~~~~dG~~lv~~ 94 (276)
T 3no2_A 78 ---EMQTARILPDGNALVAW 94 (276)
T ss_dssp ---EEEEEEECTTSCEEEEE
T ss_pred ---cccccEECCCCCEEEEe
Confidence 25567889999987754
No 466
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=97.92 E-value=5.9e-05 Score=65.33 Aligned_cols=64 Identities=16% Similarity=-0.006 Sum_probs=44.3
Q ss_pred HCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCC
Q 005240 553 ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPH 625 (706)
Q Consensus 553 ~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~ 625 (706)
+.+|.|+..+.+ |+|.+...........+|+.+.++.+ +.+++.++|||+||.+++.++.++|.
T Consensus 40 ~~~~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 40 PEGYAFYLLDLP---GYGRTEGPRMAPEELAHFVAGFAVMM------NLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CTTSEEEEECCT---TSTTCCCCCCCHHHHHHHHHHHHHHT------TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred hCCcEEEEECCC---CCCCCCCCCCCHHHHHHHHHHHHHHc------CCCccEEEEEChHHHHHHHHHhcCCc
Confidence 345999986665 45554332211455566666655544 34689999999999999999999985
No 467
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.91 E-value=0.0014 Score=63.40 Aligned_cols=210 Identities=10% Similarity=0.079 Sum_probs=114.9
Q ss_pred eeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEE
Q 005240 22 KEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLL 101 (706)
Q Consensus 22 ~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l 101 (706)
++|.++.. ..+..+|.||++.|+.+. +....|+.+|+.+...+++...... ....+++.++|++
T Consensus 20 ~~l~g~~~--~lSGla~~~~~~~L~aV~---------d~~~~I~~ld~~g~v~~~i~l~g~~----D~EGIa~~~~g~~- 83 (255)
T 3qqz_A 20 KEIAGITN--NISSLTWSAQSNTLFSTI---------NKPAAIVEMTTNGDLIRTIPLDFVK----DLETIEYIGDNQF- 83 (255)
T ss_dssp EECTTCCS--CEEEEEEETTTTEEEEEE---------ETTEEEEEEETTCCEEEEEECSSCS----SEEEEEECSTTEE-
T ss_pred eECCCccc--CcceeEEeCCCCEEEEEE---------CCCCeEEEEeCCCCEEEEEecCCCC----ChHHeEEeCCCEE-
Confidence 34443333 488999999999986655 3357899999985444444322211 1667889888864
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccC--CCc---eecC----
Q 005240 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLD--GTA---KDFG---- 172 (706)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~--g~~---~~lt---- 172 (706)
++.. + + ..+|++++++ +.. ..+.
T Consensus 84 ~vs~-E-~----------------------------------------------~~~l~~~~v~~~~~i~~~~~~~~~~~ 115 (255)
T 3qqz_A 84 VISD-E-R----------------------------------------------DYAIYVISLTPNSEVKILKKIKIPLQ 115 (255)
T ss_dssp EEEE-T-T----------------------------------------------TTEEEEEEECTTCCEEEEEEEECCCS
T ss_pred EEEE-C-C----------------------------------------------CCcEEEEEcCCCCeeeeeeeeccccc
Confidence 3332 1 1 1345555542 221 1111
Q ss_pred --C-CceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEe--cCCCeeEEcccCCCCCCCCcccCccCCCCcce
Q 005240 173 --T-PAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWT--TDGKLVRELCDLPPAEDIPVCYNSVREGMRSI 247 (706)
Q Consensus 173 --~-~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~ 247 (706)
. ......++|+|++++|+....+. +..|+.++ +.+...+.+.......... -.....+
T Consensus 116 ~~~~N~g~EGLA~d~~~~~L~va~E~~-----------p~~i~~~~g~~~~~~l~i~~~~~~~~~~~------~~d~S~l 178 (255)
T 3qqz_A 116 ESPTNCGFEGLAYSRQDHTFWFFKEKN-----------PIEVYKVNGLLSSNELHISKDKALQRQFT------LDDVSGA 178 (255)
T ss_dssp SCCCSSCCEEEEEETTTTEEEEEEESS-----------SEEEEEEESTTCSSCCEEEECHHHHHTCC------SSCCCEE
T ss_pred cccccCCcceEEEeCCCCEEEEEECcC-----------CceEEEEcccccCCceeeecchhhccccc------cCCceeE
Confidence 1 13568999999999998866554 23677776 1122222211100000000 0113477
Q ss_pred eeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecc----------cccccceecCCCceEEEEe
Q 005240 248 SWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD----------LRFRSVSWCDDSLALVNET 317 (706)
Q Consensus 248 ~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~----------~~~~~~~wspDg~~l~~~~ 317 (706)
++.|.... |+.++..+ ..|..+|. + |++....... .+...+++.++|. |+.++
T Consensus 179 ~~dp~tg~-lliLS~~s-----------~~L~~~d~---~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvs 241 (255)
T 3qqz_A 179 EFNQQKNT-LLVLSHES-----------RALQEVTL---V-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVS 241 (255)
T ss_dssp EEETTTTE-EEEEETTT-----------TEEEEECT---T-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEE
T ss_pred EEcCCCCe-EEEEECCC-----------CeEEEEcC---C-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEc
Confidence 88888766 77665322 24777776 4 4444433222 2446778999996 55443
Q ss_pred eccccceEEEEEcCCC
Q 005240 318 WYKTSQTRTWLVCPGS 333 (706)
Q Consensus 318 ~~~~~~~~l~~~d~~~ 333 (706)
+. +.+|++....
T Consensus 242 -E~---n~~y~f~~~~ 253 (255)
T 3qqz_A 242 -EP---NRFYRFTPQS 253 (255)
T ss_dssp -TT---TEEEEEEC--
T ss_pred -CC---ceEEEEEecC
Confidence 32 3688886543
No 468
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=97.89 E-value=1.4e-05 Score=84.33 Aligned_cols=110 Identities=16% Similarity=0.227 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCC---CceeEEEeccCCCCCCCC---Ccc--chHHHHH
Q 005240 581 QLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCCGIARSGSYNKTLT---PFG--FQAERFF 652 (706)
Q Consensus 581 ~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p---~~~~a~v~~~~~~d~~~~---~~~--~~~~~~~ 652 (706)
..++++.+.++.+.++. ..+++.++||||||.+++.++.++| ++++++|+.++.++..+. +.. +......
T Consensus 109 ~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~~d~p~g~~~L~ilG~~d~~ 186 (484)
T 2zyr_A 109 ETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWGVDAPEGIPTLAVFGNPKAL 186 (484)
T ss_dssp HHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCSEECCTTSCEEEEEECGGGS
T ss_pred hhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccccccCcCCHHHHHhCCCCcC
Confidence 44667777777776652 2378999999999999999999997 489999999987653211 000 0000000
Q ss_pred HHHH--hCCC--cEEEEEeCCCCccCCCcccHHHHHHHHHHHHHHH
Q 005240 653 DALK--GHGA--LSRLVLLPFEHHVYAARENVMHVIWETDRWLQKY 694 (706)
Q Consensus 653 ~~l~--~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~f~~~~ 694 (706)
..+. .... ..+.+++++.+|..... ..+..+.+++||...
T Consensus 187 p~V~~pss~L~~ga~~v~i~~a~H~~ll~--dp~v~~~Vl~fL~~~ 230 (484)
T 2zyr_A 187 PALGLPEEKVVYNATNVYFNNMTHVQLCT--SPETFAVMFEFINGY 230 (484)
T ss_dssp CCSSCCSSCCEETSEEEEETTCCHHHHHH--CHHHHHHHHHHHHSS
T ss_pred CcccChhHhcCCCceEEEECCCCcccccc--CHHHHHHHHHHhccc
Confidence 0000 0001 23566789999975421 235667788888753
No 469
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.85 E-value=0.0016 Score=63.46 Aligned_cols=211 Identities=8% Similarity=-0.052 Sum_probs=110.7
Q ss_pred eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCc
Q 005240 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (706)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~ 255 (706)
....+.|+||| +|+.++.... .+.|.++|+.++++..-..... +.....+.++++.
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~----------~s~v~~iD~~tg~v~~~i~l~~-------------~~fgeGi~~~g~~ 77 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYG----------RSSVRQVALQTGKVENIHKMDD-------------SYFGEGLTLLNEK 77 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTT----------TCEEEEEETTTCCEEEEEECCT-------------TCCEEEEEEETTE
T ss_pred CcccEEEeCCC-eEEEECCCCC----------CCEEEEEECCCCCEEEEEecCC-------------CcceEEEEEeCCE
Confidence 34688999996 6766553211 3589999999776544322211 1112234445665
Q ss_pred eEEEEEeccCCCCccccCccceeeeecCCCCCCCCce-EEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCC
Q 005240 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPE-ILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSK 334 (706)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~ 334 (706)
||.... ..+.++++|. ++.+.. ++.. . .......++||++++.+. +...|+.+|+++.
T Consensus 78 -lyv~t~-----------~~~~v~viD~---~t~~v~~~i~~-g-~~~g~glt~Dg~~l~vs~----gs~~l~viD~~t~ 136 (266)
T 2iwa_A 78 -LYQVVW-----------LKNIGFIYDR---RTLSNIKNFTH-Q-MKDGWGLATDGKILYGSD----GTSILYEIDPHTF 136 (266)
T ss_dssp -EEEEET-----------TCSEEEEEET---TTTEEEEEEEC-C-SSSCCEEEECSSSEEEEC----SSSEEEEECTTTC
T ss_pred -EEEEEe-----------cCCEEEEEEC---CCCcEEEEEEC-C-CCCeEEEEECCCEEEEEC----CCCeEEEEECCCC
Confidence 765531 2235888988 444332 2322 2 123345778999888642 2457999999985
Q ss_pred CCCceee-ecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecc
Q 005240 335 DVAPRVL-FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 413 (706)
Q Consensus 335 ~~~~~~l-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (706)
+. ...+ ....-..+ . ...++.+. || .+++.. .....|..+|+++|+....++.
T Consensus 137 ~v-~~~I~Vg~~~~p~-~--~~nele~~-dg-~lyvn~--------------------~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 137 KL-IKKHNVKYNGHRV-I--RLNELEYI-NG-EVWANI--------------------WQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp CE-EEEEECEETTEEC-C--CEEEEEEE-TT-EEEEEE--------------------TTSSEEEEEETTTCCEEEEEEC
T ss_pred cE-EEEEEECCCCccc-c--cceeEEEE-CC-EEEEec--------------------CCCCeEEEEECCCCcEEEEEEC
Confidence 32 2222 11100000 0 00123334 44 444332 1122588999999998776655
Q ss_pred cchhhhhhhhhhcc---CCCceecccCCCEEEEEEecCCCCcEEEEEECCC
Q 005240 414 NREKYFETAVALVF---GQGEEDINLNQLKILTSKESKTEITQYHILSWPL 461 (706)
Q Consensus 414 ~~~~~~~~~~~~~~---~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~~~~ 461 (706)
.+- ..+.+..... .-....++||+++++.+.... +.++.+++..
T Consensus 191 ~g~-~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~---~~v~~i~l~~ 237 (266)
T 2iwa_A 191 PNL-RKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW---PKLFEIKLHL 237 (266)
T ss_dssp HHH-HHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC---SEEEEEEEEE
T ss_pred CCc-ccccccccccccCceEEEEEcCCCCEEEEECCCC---CeEEEEEEec
Confidence 321 0000000000 012468999999888765433 5577766543
No 470
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.84 E-value=0.00074 Score=65.01 Aligned_cols=205 Identities=11% Similarity=0.143 Sum_probs=117.2
Q ss_pred eeeecCCCCCc--ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCc
Q 005240 22 KEVHGYPDGAK--INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNST 99 (706)
Q Consensus 22 ~~i~~~~~~~~--~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~ 99 (706)
+-+..+|.+.. .....|+ || .|+.+... .+...|.++|+++|+..+-...+.. +-.-...++|+
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~-~LyestG~-------~g~S~v~~vD~~Tgkv~~~~~l~~~-----~FgeGit~~g~ 97 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NG-YFYESTGL-------NGRSSIRKVDIESGKTLQQIELGKR-----YFGEGISDWKD 97 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TT-EEEEEEEE-------TTEEEEEEECTTTCCEEEEEECCTT-----CCEEEEEEETT
T ss_pred EEEEEecCCCCcccceEEEE-CC-EEEEECCC-------CCCceEEEEECCCCcEEEEEecCCc-----cceeEEEEeCC
Confidence 33455565543 3677888 55 55443321 4567999999999987554333321 22223456777
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC-CceecCCCceE
Q 005240 100 LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTPAVY 177 (706)
Q Consensus 100 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g-~~~~lt~~~~~ 177 (706)
.|+.... ....++++|. +. ....+....
T Consensus 98 ~ly~ltw------------------------------------------------~~~~v~v~D~~t~~~~~ti~~~~-- 127 (262)
T 3nol_A 98 KIVGLTW------------------------------------------------KNGLGFVWNIRNLRQVRSFNYDG-- 127 (262)
T ss_dssp EEEEEES------------------------------------------------SSSEEEEEETTTCCEEEEEECSS--
T ss_pred EEEEEEe------------------------------------------------eCCEEEEEECccCcEEEEEECCC--
Confidence 8877632 2268999998 55 344444332
Q ss_pred eeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCe-eEEcccCCCCCCCCcccCccCCCCcceeeecCCCce
Q 005240 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKL-VRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (706)
Q Consensus 178 ~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~ 256 (706)
....+++||++|+.+. . ...|+.+|..+.+ .+++.-... ..|. .....+.|. ||+
T Consensus 128 eG~glt~dg~~L~~Sd-G------------s~~i~~iDp~T~~v~~~I~V~~~--g~~~------~~lNELe~~-~G~-- 183 (262)
T 3nol_A 128 EGWGLTHNDQYLIMSD-G------------TPVLRFLDPESLTPVRTITVTAH--GEEL------PELNELEWV-DGE-- 183 (262)
T ss_dssp CCCCEEECSSCEEECC-S------------SSEEEEECTTTCSEEEEEECEET--TEEC------CCEEEEEEE-TTE--
T ss_pred CceEEecCCCEEEEEC-C------------CCeEEEEcCCCCeEEEEEEeccC--Cccc------cccceeEEE-CCE--
Confidence 2345668999887654 2 2479999998644 334332210 0110 001135565 553
Q ss_pred EEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecc-------------cccccceecCCCceEEEEeeccccc
Q 005240 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD-------------LRFRSVSWCDDSLALVNETWYKTSQ 323 (706)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-------------~~~~~~~wspDg~~l~~~~~~~~~~ 323 (706)
|| +.. +..+.|.++|. ++|++....... .....++|+|+++.|+.+.- .+
T Consensus 184 ly-an~----------w~~~~I~vIDp---~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK---~W 246 (262)
T 3nol_A 184 IF-ANV----------WQTNKIVRIDP---ETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK---LW 246 (262)
T ss_dssp EE-EEE----------TTSSEEEEECT---TTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET---TC
T ss_pred EE-EEE----------ccCCeEEEEEC---CCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC---CC
Confidence 55 321 23346888888 677765433221 13467899999988887642 56
Q ss_pred eEEEEEcC
Q 005240 324 TRTWLVCP 331 (706)
Q Consensus 324 ~~l~~~d~ 331 (706)
.+||.+.+
T Consensus 247 p~~~ev~~ 254 (262)
T 3nol_A 247 PKVFEITL 254 (262)
T ss_dssp SEEEEEEE
T ss_pred CceEEEEE
Confidence 77887754
No 471
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.83 E-value=0.00059 Score=68.70 Aligned_cols=62 Identities=11% Similarity=0.044 Sum_probs=36.0
Q ss_pred ccceeeCC---CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEe
Q 005240 33 INFVSWSP---DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTI 105 (706)
Q Consensus 33 ~~~~~~SP---DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~ 105 (706)
+...+||| ||+.||-.+ ....|.++|+++|+..+......... ..+...+|||||++++..+
T Consensus 181 v~~l~fs~~~g~~~~LaSgS----------~D~TIkIWDl~TGk~l~tL~g~~~~v-~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGTT----------IMNNIVIWNLKTGQLLKKMHIDDSYQ-ASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp SCEEEEEEEETSTTEEEEEE----------TTSEEEEEETTTCCEEEEEECCC----CCCEEEEEEETTEEEEEEC
T ss_pred eeeEEeeccCCCCceEEEec----------CCCcEEEEECCCCcEEEEEcCCCcce-eeeEEEEECCCCCEEEEec
Confidence 44555566 445554433 34678888999988644432211101 1144568999999887654
No 472
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.82 E-value=0.0026 Score=67.49 Aligned_cols=193 Identities=16% Similarity=0.166 Sum_probs=109.4
Q ss_pred cceeEeecCCCCCCCCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCcc
Q 005240 5 TGIGIHRLLPDDSLGPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDIC 84 (706)
Q Consensus 5 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~ 84 (706)
..|.+.++.. ++....-. .....+..+.| ||+.|+.... ...|.++|+.+++..........
T Consensus 153 g~i~iwd~~~----~~~~~~~~-~h~~~v~~l~~--~~~~l~sg~~----------dg~i~vwd~~~~~~~~~~~~h~~- 214 (435)
T 1p22_A 153 NTIKIWDKNT----LECKRILT-GHTGSVLCLQY--DERVIITGSS----------DSTVRVWDVNTGEMLNTLIHHCE- 214 (435)
T ss_dssp SCEEEEESSS----CCEEEEEC-CCSSCEEEEEC--CSSEEEEEET----------TSCEEEEESSSCCEEEEECCCCS-
T ss_pred CeEEEEeCCC----CeEEEEEc-CCCCcEEEEEE--CCCEEEEEcC----------CCeEEEEECCCCcEEEEEcCCCC-
Confidence 3578888866 55444321 12224555665 8888877542 35677888888876544322221
Q ss_pred ccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc
Q 005240 85 LNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL 164 (706)
Q Consensus 85 ~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l 164 (706)
.+..+.|++ ..|+..+. .+.|.++++
T Consensus 215 ---~v~~l~~~~--~~l~s~s~-------------------------------------------------dg~i~vwd~ 240 (435)
T 1p22_A 215 ---AVLHLRFNN--GMMVTCSK-------------------------------------------------DRSIAVWDM 240 (435)
T ss_dssp ---CEEEEECCT--TEEEEEET-------------------------------------------------TSCEEEEEC
T ss_pred ---cEEEEEEcC--CEEEEeeC-------------------------------------------------CCcEEEEeC
Confidence 256677764 45555432 156777787
Q ss_pred -CCC-c---eecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCccc
Q 005240 165 -DGT-A---KDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCY 237 (706)
Q Consensus 165 -~g~-~---~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~ 237 (706)
+++ . ..+... ..+..+.| +|++|+..+.+ ..|.+||+.+++. ..+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d-------------g~i~vwd~~~~~~~~~~~~~~--------- 296 (435)
T 1p22_A 241 ASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD-------------RTIKVWNTSTCEFVRTLNGHK--------- 296 (435)
T ss_dssp SSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT-------------SEEEEEETTTCCEEEEEECCS---------
T ss_pred CCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC-------------CeEEEEECCcCcEEEEEcCCC---------
Confidence 342 2 223333 56667777 88888766543 3799999986543 3333221
Q ss_pred CccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCCc-eEEeecccccccceecCCCceEEEE
Q 005240 238 NSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKP-EILHKLDLRFRSVSWCDDSLALVNE 316 (706)
Q Consensus 238 ~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~wspDg~~l~~~ 316 (706)
..+..+.| +++. |+ .... .+.|.++|+ .+++. ..+..+...+..+.| |+..|+..
T Consensus 297 ----~~v~~~~~--~~~~-l~-~g~~-----------dg~i~iwd~---~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg 352 (435)
T 1p22_A 297 ----RGIACLQY--RDRL-VV-SGSS-----------DNTIRLWDI---ECGACLRVLEGHEELVRCIRF--DNKRIVSG 352 (435)
T ss_dssp ----SCEEEEEE--ETTE-EE-EEET-----------TSCEEEEET---TTCCEEEEECCCSSCEEEEEC--CSSEEEEE
T ss_pred ----CcEEEEEe--CCCE-EE-EEeC-----------CCeEEEEEC---CCCCEEEEEeCCcCcEEEEEe--cCCEEEEE
Confidence 11224455 4443 33 2211 124788888 44544 344455666777778 77777776
Q ss_pred e
Q 005240 317 T 317 (706)
Q Consensus 317 ~ 317 (706)
+
T Consensus 353 ~ 353 (435)
T 1p22_A 353 A 353 (435)
T ss_dssp E
T ss_pred e
Confidence 5
No 473
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.82 E-value=0.011 Score=58.52 Aligned_cols=193 Identities=13% Similarity=0.078 Sum_probs=107.4
Q ss_pred CcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 005240 31 AKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (706)
Q Consensus 31 ~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~ 110 (706)
.....+.++|||+.. ++. .....|++++.+ ++.+.+..... ...+..+.++|||+. ++...
T Consensus 57 ~~~~~i~~~~~g~l~-v~~---------~~~~~i~~~~~~-g~~~~~~~~~~---~~~~~~i~~~~~g~l-~v~~~---- 117 (299)
T 2z2n_A 57 AKVMCLTISSDGEVW-FTE---------NAANKIGRITKK-GIIKEYTLPNP---DSAPYGITEGPNGDI-WFTEM---- 117 (299)
T ss_dssp CCEEEEEECTTSCEE-EEE---------TTTTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTSCE-EEEET----
T ss_pred CceeeEEECCCCCEE-EeC---------CCCCeEEEECCC-CcEEEEeCCCc---CCCceeeEECCCCCE-EEEec----
Confidence 356678889998733 332 234578888876 44444431101 112556788888874 44321
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCCceecCC--C-ceEeeeeeCCCCc
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDFGT--P-AVYTAVEPSPDQK 187 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~~~~lt~--~-~~~~~~~~SpDG~ 187 (706)
....|++++.+|+...+.. . .....++++|||+
T Consensus 118 --------------------------------------------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~ 153 (299)
T 2z2n_A 118 --------------------------------------------NGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNA 153 (299)
T ss_dssp --------------------------------------------TTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSC
T ss_pred --------------------------------------------CCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCC
Confidence 1157888888665444321 2 4577889999994
Q ss_pred EEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCC
Q 005240 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGD 267 (706)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~ 267 (706)
|++.... ...|++++. +++.+.+.... .. ..+..+.+.++|+ |++.. ..
T Consensus 154 -l~v~~~~------------~~~i~~~~~-~g~~~~~~~~~-~~----------~~~~~i~~~~~g~--l~v~~-~~--- 202 (299)
T 2z2n_A 154 -LWFTENQ------------NNAIGRITE-SGDITEFKIPT-PA----------SGPVGITKGNDDA--LWFVE-II--- 202 (299)
T ss_dssp -EEEEETT------------TTEEEEECT-TCCEEEEECSS-TT----------CCEEEEEECTTSS--EEEEE-TT---
T ss_pred -EEEEeCC------------CCEEEEEcC-CCcEEEeeCCC-CC----------CcceeEEECCCCC--EEEEc-cC---
Confidence 5554432 247889998 44444431111 00 1234678888876 65442 11
Q ss_pred CccccCccceeeeecCCCCCCCCceEEee--cccccccceecCCCceEEEEeeccccceEEEEEcCC
Q 005240 268 ANVEVSPRDIIYTQPAEPAEGEKPEILHK--LDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (706)
Q Consensus 268 ~~~~~~~~~~l~~~d~~~~~~~~~~~l~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (706)
...|++++. . ++...+.. .......+.++++|. |++.. . ....|+++|++
T Consensus 203 -------~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~-~--~~~~i~~~d~~ 254 (299)
T 2z2n_A 203 -------GNKIGRITT---S-GEITEFKIPTPNARPHAITAGAGID-LWFTE-W--GANKIGRLTSN 254 (299)
T ss_dssp -------TTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTC-EEEEE-T--TTTEEEEEETT
T ss_pred -------CceEEEECC---C-CcEEEEECCCCCCCceeEEECCCCC-EEEec-c--CCceEEEECCC
Confidence 124677765 2 34433321 224456778889987 44432 1 23468889884
No 474
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=97.78 E-value=9.2e-05 Score=74.54 Aligned_cols=77 Identities=22% Similarity=0.140 Sum_probs=52.0
Q ss_pred HCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCC---CceeE
Q 005240 553 ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAP---HLFCC 629 (706)
Q Consensus 553 ~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p---~~~~a 629 (706)
..+|.|+..+.+ |+|.+...........+|+... +.+. .+..++.++||||||.+++.++.+.| +++++
T Consensus 93 ~~~~~v~~~d~~---G~G~s~~~~~~~~~~a~~~~~~---l~~~--~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~ 164 (300)
T 1kez_A 93 RGIAPVRAVPQP---GYEEGEPLPSSMAAVAAVQADA---VIRT--QGDKPFVVAGHSAGALMAYALATELLDRGHPPRG 164 (300)
T ss_dssp SSSCCBCCCCCT---TSSTTCCBCSSHHHHHHHHHHH---HHHH--CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSE
T ss_pred CCCceEEEecCC---CCCCCCCCCCCHHHHHHHHHHH---HHHh--cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccE
Confidence 356888875443 5555433333344555554433 3332 23468999999999999999999987 48999
Q ss_pred EEeccCCC
Q 005240 630 GIARSGSY 637 (706)
Q Consensus 630 ~v~~~~~~ 637 (706)
+|..++..
T Consensus 165 lvl~~~~~ 172 (300)
T 1kez_A 165 VVLIDVYP 172 (300)
T ss_dssp EECBTCCC
T ss_pred EEEECCCC
Confidence 99988754
No 475
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=97.78 E-value=9.3e-05 Score=72.99 Aligned_cols=100 Identities=12% Similarity=-0.004 Sum_probs=64.0
Q ss_pred ceEEEEEcCCCCCCcCcCCcccCCCCCcCCCCchHHHHHHHCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHH
Q 005240 513 LPCLFWAYPEDYKSKDAAGQVRGSPNEFSGMTPTSSLIFLARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEE 592 (706)
Q Consensus 513 ~p~vv~~hGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~ 592 (706)
.|.||++||.+.. ...|. .+.. .+.+|.|+..+.+|. +............++|+.+.++.
T Consensus 21 ~~~lv~lhg~~~~-----------~~~~~----~~~~--l~~~~~v~~~d~~G~---~~~~~~~~~~~~~~~~~~~~i~~ 80 (265)
T 3ils_A 21 RKTLFMLPDGGGS-----------AFSYA----SLPR--LKSDTAVVGLNCPYA---RDPENMNCTHGAMIESFCNEIRR 80 (265)
T ss_dssp SEEEEEECCTTCC-----------GGGGT----TSCC--CSSSEEEEEEECTTT---TCGGGCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCC-----------HHHHH----HHHh--cCCCCEEEEEECCCC---CCCCCCCCCHHHHHHHHHHHHHH
Confidence 4678889997421 11221 1223 367899988666542 22222222345556666666554
Q ss_pred HHHcCCCCCCcEEEEEechHHHHHHHHHH---hCCCceeEEEeccCCC
Q 005240 593 VVRRGVADPSRIAVGGHSYGAFMTAHLLA---HAPHLFCCGIARSGSY 637 (706)
Q Consensus 593 l~~~~~id~~~i~i~G~S~GG~~a~~~~~---~~p~~~~a~v~~~~~~ 637 (706)
+. ...++.++||||||.+++.++. ..|++++.++..++..
T Consensus 81 ~~-----~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~ 123 (265)
T 3ils_A 81 RQ-----PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPI 123 (265)
T ss_dssp HC-----SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCS
T ss_pred hC-----CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCC
Confidence 41 2258999999999999999997 6778899988887643
No 476
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.71 E-value=0.0028 Score=64.91 Aligned_cols=68 Identities=10% Similarity=0.062 Sum_probs=37.9
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCce-eecccCCCc-cccccccceEEecCCcEEEEE
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA-KPLFESPDI-CLNAVFGSFVWVNNSTLLIFT 104 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~lt~~~~~-~~~~~~~~~~wSpDg~~l~~~ 104 (706)
.+..++++|||+ |+.+... ........|+++|+++++. +.+...... .....+..++++|++..+|+.
T Consensus 68 ~p~gv~~d~~g~-L~v~D~g----~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvt 137 (343)
T 2qe8_A 68 TVLGIKSDGNGI-VWMLDNG----NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYIS 137 (343)
T ss_dssp CEEEEEECSSSE-EEEEECH----HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEE
T ss_pred EeeEEEEcCCCc-EEEEcCC----CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEE
Confidence 566789999986 5443210 0001246899999998874 333211110 001124678899876666655
No 477
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=97.69 E-value=0.00013 Score=70.82 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC-----CCceeEEEeccCCCC
Q 005240 579 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA-----PHLFCCGIARSGSYN 638 (706)
Q Consensus 579 ~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~-----p~~~~a~v~~~~~~d 638 (706)
+....+++..+++++.++.. -.++.++||||||.+++.++.++ |++++.+|..++.++
T Consensus 77 ~~~~a~~l~~~~~~l~~~~~--~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~ 139 (250)
T 3lp5_A 77 IDKQAVWLNTAFKALVKTYH--FNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYN 139 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSC--CSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHHHcC--CCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCC
Confidence 45678889999999977643 36899999999999999999877 678999999987665
No 478
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=97.69 E-value=6.2e-05 Score=74.78 Aligned_cols=86 Identities=13% Similarity=0.102 Sum_probs=53.2
Q ss_pred HHHHHHHC--CeEEEEcCCCCcCCCCCCCC-chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC
Q 005240 547 SSLIFLAR--RFAVLAGPSIPIIGEGDKLP-NDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA 623 (706)
Q Consensus 547 ~~~~l~~~--G~~v~~~~~~~~~g~g~~~~-~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~ 623 (706)
....|.+. |+.|+..+. |+|.+.. ...+......++..+++++.....+ .+++.++||||||.++..++.++
T Consensus 27 ~~~~L~~~~~g~~v~~~d~----G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l-~~~~~lvGhSmGG~ia~~~a~~~ 101 (279)
T 1ei9_A 27 IKKMVEKKIPGIHVLSLEI----GKTLREDVENSFFLNVNSQVTTVCQILAKDPKL-QQGYNAMGFSQGGQFLRAVAQRC 101 (279)
T ss_dssp HHHHHHHHSTTCCEEECCC----SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGG-TTCEEEEEETTHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCcEEEEEEe----CCCCccccccccccCHHHHHHHHHHHHHhhhhc-cCCEEEEEECHHHHHHHHHHHHc
Confidence 45566653 889988553 4443211 0111112223333444444332112 26899999999999999999999
Q ss_pred CCc-eeEEEeccCCC
Q 005240 624 PHL-FCCGIARSGSY 637 (706)
Q Consensus 624 p~~-~~a~v~~~~~~ 637 (706)
|+. ++.+|+.++..
T Consensus 102 ~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 102 PSPPMVNLISVGGQH 116 (279)
T ss_dssp CSSCEEEEEEESCCT
T ss_pred CCcccceEEEecCcc
Confidence 984 99999887643
No 479
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.64 E-value=0.016 Score=58.13 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=37.9
Q ss_pred ceEEEEccCCCceec-CCCceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccC
Q 005240 157 AQLVLGSLDGTAKDF-GTPAVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDL 227 (706)
Q Consensus 157 ~~l~~~~l~g~~~~l-t~~~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 227 (706)
..|++++.+|+...+ ........++++|||+ |++...... ...|+.++..+++++.+...
T Consensus 53 ~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~-l~vad~~~~----------~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 53 GEIVSITPDGNQQIHATVEGKVSGLAFTSNGD-LVATGWNAD----------SIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp TEEEEECTTCCEEEEEECSSEEEEEEECTTSC-EEEEEECTT----------SCEEEEEECTTSCEEEEEEC
T ss_pred CeEEEECCCCceEEEEeCCCCceeEEEcCCCc-EEEEeccCC----------cceEEEEcCCCCeEEEEEeC
Confidence 578999987744332 2335677899999998 554442211 12577788777766665543
No 480
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.63 E-value=0.033 Score=54.92 Aligned_cols=192 Identities=14% Similarity=0.076 Sum_probs=108.1
Q ss_pred cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCCC
Q 005240 32 KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRD 111 (706)
Q Consensus 32 ~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~ 111 (706)
....+.++|||+ |+++. .....|++++.+ ++.+.+..... ...+..+..+++|+. ++...
T Consensus 63 ~~~~i~~~~~g~-l~v~~---------~~~~~v~~~d~~-g~~~~~~~~~~---~~~~~~i~~~~~g~l-~v~~~----- 122 (300)
T 2qc5_A 63 KVMCLIVSSLGD-IWFTE---------NGANKIGKLSKK-GGFTEYPLPQP---DSGPYGITEGLNGDI-WFTQL----- 122 (300)
T ss_dssp CEEEEEECTTSC-EEEEE---------TTTTEEEEECTT-SCEEEEECSST---TCCEEEEEECSTTCE-EEEET-----
T ss_pred cceeEEECCCCC-EEEEe---------cCCCeEEEECCC-CCeEEecCCCC---CCCCccceECCCCCE-EEEcc-----
Confidence 466778889886 43332 334678899887 65554432111 012556778888874 44321
Q ss_pred CCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCCceec--CCC-ceEeeeeeCCCCcE
Q 005240 112 PPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTAKDF--GTP-AVYTAVEPSPDQKY 188 (706)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~~~~l--t~~-~~~~~~~~SpDG~~ 188 (706)
....|++++.+|+...+ ... .....++++|+|+
T Consensus 123 -------------------------------------------~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~- 158 (300)
T 2qc5_A 123 -------------------------------------------NGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNA- 158 (300)
T ss_dssp -------------------------------------------TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSS-
T ss_pred -------------------------------------------CCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCC-
Confidence 11568888877754433 222 4677889999998
Q ss_pred EEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCC
Q 005240 189 VLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDA 268 (706)
Q Consensus 189 i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~ 268 (706)
|++.... ...|++++.++. ...+.. +... ..+..+.+.++|. |++.. ..
T Consensus 159 l~v~~~~------------~~~i~~~~~~g~-~~~~~~-~~~~----------~~~~~i~~d~~g~--l~v~~-~~---- 207 (300)
T 2qc5_A 159 LWFTENQ------------NNSIGRITNTGK-LEEYPL-PTNA----------AAPVGITSGNDGA--LWFVE-IM---- 207 (300)
T ss_dssp EEEEETT------------TTEEEEECTTCC-EEEEEC-SSTT----------CCEEEEEECTTSS--EEEEE-TT----
T ss_pred EEEEecC------------CCeEEEECCCCc-EEEeeC-CCCC----------CCcceEEECCCCC--EEEEc-cC----
Confidence 6555432 237888988543 333321 1110 1234677888875 66542 11
Q ss_pred ccccCccceeeeecCCCCCCCCceEEe--ecccccccceecCCCceEEEEeeccccceEEEEEcCC
Q 005240 269 NVEVSPRDIIYTQPAEPAEGEKPEILH--KLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPG 332 (706)
Q Consensus 269 ~~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~ 332 (706)
.+.|++++. . ++...+. ........+.+.++|+ |++.. . ....|++++.+
T Consensus 208 ------~~~i~~~~~---~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~-~--~~~~i~~~~~~ 259 (300)
T 2qc5_A 208 ------GNKIGRITT---T-GEISEYDIPTPNARPHAITAGKNSE-IWFTE-W--GANQIGRITND 259 (300)
T ss_dssp ------TTEEEEECT---T-CCEEEEECSSTTCCEEEEEECSTTC-EEEEE-T--TTTEEEEECTT
T ss_pred ------CCEEEEEcC---C-CcEEEEECCCCCCCceEEEECCCCC-EEEec-c--CCCeEEEECCC
Confidence 124677765 2 3433332 1233456678889987 44432 1 23468899984
No 481
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=97.57 E-value=0.00041 Score=74.15 Aligned_cols=60 Identities=27% Similarity=0.287 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhCCCceeEEEeccCCCC
Q 005240 579 VEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHAPHLFCCGIARSGSYN 638 (706)
Q Consensus 579 ~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~p~~~~a~v~~~~~~d 638 (706)
.++++.|+...++++++.--....+++++|+||||.||+|+-.++|+.|.++++.++...
T Consensus 105 ~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv~ 164 (472)
T 4ebb_A 105 VEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVL 164 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccceE
Confidence 568899999999999876444557999999999999999999999999998888877543
No 482
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.50 E-value=0.014 Score=56.20 Aligned_cols=200 Identities=9% Similarity=-0.027 Sum_probs=105.2
Q ss_pred eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCc
Q 005240 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (706)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~ 255 (706)
....+.|+ |+ .|+.+....+ .+.|.++|++++++..-...+. ........++++.
T Consensus 44 ftqGL~~~-~~-~LyestG~~g----------~S~v~~vD~~Tgkv~~~~~l~~-------------~~FgeGit~~g~~ 98 (262)
T 3nol_A 44 FTEGFFYR-NG-YFYESTGLNG----------RSSIRKVDIESGKTLQQIELGK-------------RYFGEGISDWKDK 98 (262)
T ss_dssp EEEEEEEE-TT-EEEEEEEETT----------EEEEEEECTTTCCEEEEEECCT-------------TCCEEEEEEETTE
T ss_pred ccceEEEE-CC-EEEEECCCCC----------CceEEEEECCCCcEEEEEecCC-------------ccceeEEEEeCCE
Confidence 44578888 55 6766554432 3589999999776544322221 1112234556665
Q ss_pred eEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCC
Q 005240 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (706)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~ 335 (706)
||.+. +..+.++++|. ++.+...-..... .....++|++.|+.+. +..+|+.+|+++.+
T Consensus 99 -ly~lt-----------w~~~~v~v~D~---~t~~~~~ti~~~~--eG~glt~dg~~L~~Sd----Gs~~i~~iDp~T~~ 157 (262)
T 3nol_A 99 -IVGLT-----------WKNGLGFVWNI---RNLRQVRSFNYDG--EGWGLTHNDQYLIMSD----GTPVLRFLDPESLT 157 (262)
T ss_dssp -EEEEE-----------SSSSEEEEEET---TTCCEEEEEECSS--CCCCEEECSSCEEECC----SSSEEEEECTTTCS
T ss_pred -EEEEE-----------eeCCEEEEEEC---ccCcEEEEEECCC--CceEEecCCCEEEEEC----CCCeEEEEcCCCCe
Confidence 76442 12346889998 5544433222222 3345667888877642 24579999999853
Q ss_pred CCceee-ecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeeccc
Q 005240 336 VAPRVL-FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESN 414 (706)
Q Consensus 336 ~~~~~l-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~ 414 (706)
.. ..+ ....-..+. ...++.|. +| .|++.. .....|.++|+++|++...++..
T Consensus 158 v~-~~I~V~~~g~~~~---~lNELe~~-~G-~lyan~--------------------w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 158 PV-RTITVTAHGEELP---ELNELEWV-DG-EIFANV--------------------WQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp EE-EEEECEETTEECC---CEEEEEEE-TT-EEEEEE--------------------TTSSEEEEECTTTCBEEEEEECT
T ss_pred EE-EEEEeccCCcccc---ccceeEEE-CC-EEEEEE--------------------ccCCeEEEEECCCCcEEEEEECC
Confidence 11 111 100000000 00013332 44 344332 12236889999999987777654
Q ss_pred chhhhhhhh-hhc--cCCCceecccCCCEEEEEEecCC
Q 005240 415 REKYFETAV-ALV--FGQGEEDINLNQLKILTSKESKT 449 (706)
Q Consensus 415 ~~~~~~~~~-~~~--~~~~~~~~s~Dg~~l~~~~~~~~ 449 (706)
+- ..... ... +.-+-.+++|++++|+.+.-.-.
T Consensus 212 ~L--~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp 247 (262)
T 3nol_A 212 GI--LAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWP 247 (262)
T ss_dssp TG--GGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCS
T ss_pred cC--ccccccccCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 21 00000 000 01124789999998888765553
No 483
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.43 E-value=0.018 Score=58.13 Aligned_cols=145 Identities=14% Similarity=0.042 Sum_probs=75.7
Q ss_pred eEEEEccCC-CceecCCC------ceEeeeeeCC-CCcEEEEEeeccCcccc-----cccccccceEEEEecCCCeeEEc
Q 005240 158 QLVLGSLDG-TAKDFGTP------AVYTAVEPSP-DQKYVLITSMHRPYSYK-----VPCARFSQKVQVWTTDGKLVREL 224 (706)
Q Consensus 158 ~l~~~~l~g-~~~~lt~~------~~~~~~~~Sp-DG~~i~~~~~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~l 224 (706)
.|++++.++ +.+.+... .....+++.| || .|+++......... .........|++++.++++.+.+
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 467777753 44443221 2356788999 88 56666432110000 00000125789999887766554
Q ss_pred ccCCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCC---CCceEEeeccccc
Q 005240 225 CDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEG---EKPEILHKLDLRF 301 (706)
Q Consensus 225 ~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~---~~~~~l~~~~~~~ 301 (706)
.... ..+..++|+|||+. ||+.. .. ...|++++. ++ +..+.+....+ .
T Consensus 181 ~~~~-------------~~p~gia~~~dg~~-lyv~d-~~----------~~~I~~~~~---~~~~~~~~~~~~~~~g-P 231 (322)
T 2fp8_A 181 LKEL-------------HVPGGAEVSADSSF-VLVAE-FL----------SHQIVKYWL---EGPKKGTAEVLVKIPN-P 231 (322)
T ss_dssp EEEE-------------SCCCEEEECTTSSE-EEEEE-GG----------GTEEEEEES---SSTTTTCEEEEEECSS-E
T ss_pred ccCC-------------ccCcceEECCCCCE-EEEEe-CC----------CCeEEEEEC---CCCcCCccceEEeCCC-C
Confidence 3221 11336799999986 66542 21 124777777 33 23333332233 5
Q ss_pred ccceecCCCceEEEEeecc-------ccceEEEEEcCCC
Q 005240 302 RSVSWCDDSLALVNETWYK-------TSQTRTWLVCPGS 333 (706)
Q Consensus 302 ~~~~wspDg~~l~~~~~~~-------~~~~~l~~~d~~~ 333 (706)
..+...++|. |+++.... .....|+++|.++
T Consensus 232 ~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G 269 (322)
T 2fp8_A 232 GNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFG 269 (322)
T ss_dssp EEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTS
T ss_pred CCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCC
Confidence 5667888886 33332220 1135688888764
No 484
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.41 E-value=0.0021 Score=68.09 Aligned_cols=146 Identities=10% Similarity=0.131 Sum_probs=91.2
Q ss_pred cccceeeCC-CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCCC
Q 005240 32 KINFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSRR 110 (706)
Q Consensus 32 ~~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~ 110 (706)
....++++| ++..|+++. .. ..|++++++++..+.+..... ....++|+++|++|++.-.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d---------~~-~~I~~id~~~~~v~~~~~~~~-----~P~~ia~d~~G~~lyvad~~~~~ 202 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVG---------EQ-HPTRLIDFEKEYVSTVYSGLS-----KVRTICWTHEADSMIITNDQNNN 202 (430)
T ss_dssp CCCEEEEETTEEEEEEEEE---------BT-EEEEEEETTTTEEEEEECCCS-----CEEEEEECTTSSEEEEEECCSCT
T ss_pred CCCEEEECCCCCCeEEEEe---------CC-CcEEEEECCCCEEEEEecCCC-----CcceEEEeCCCCEEEEEeCCCCc
Confidence 456788999 577775542 22 789999999888776643222 25678999999987776321110
Q ss_pred CCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCCc---eecCCCceEeeeeeCCCCc
Q 005240 111 DPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTA---KDFGTPAVYTAVEPSPDQK 187 (706)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~~---~~lt~~~~~~~~~~SpDG~ 187 (706)
....++.++.+|.. +.+........++++|++.
T Consensus 203 --------------------------------------------~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g 238 (430)
T 3tc9_A 203 --------------------------------------------DRPNNYILTRESGFKVITELTKGQNCNGAETHPING 238 (430)
T ss_dssp --------------------------------------------TSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTC
T ss_pred --------------------------------------------ccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCC
Confidence 01245555554422 2232223456788999666
Q ss_pred EEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEE
Q 005240 188 YVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (706)
Q Consensus 188 ~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~ 260 (706)
+|+++... ..+|++++.+++....+...... ..+..++|+|+|+. ||++
T Consensus 239 ~lyv~d~~------------~~~V~~~~~~~~~~~~~~~~~~~-----------~~P~gia~~pdG~~-lyv~ 287 (430)
T 3tc9_A 239 ELYFNSWN------------AGQVFRYDFTTQETTPLFTIQDS-----------GWEFHIQFHPSGNY-AYIV 287 (430)
T ss_dssp CEEEEETT------------TTEEEEEETTTTEEEEEEECSSS-----------SCCEEEEECTTSSE-EEEE
T ss_pred EEEEEECC------------CCEEEEEECCCCcEEEEEEcCCC-----------CcceeEEEcCCCCE-EEEE
Confidence 78776643 24899999998776444332211 12447899999986 7755
No 485
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.41 E-value=0.0032 Score=60.63 Aligned_cols=200 Identities=9% Similarity=-0.052 Sum_probs=111.7
Q ss_pred eecCCCCCc--ccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEE
Q 005240 24 VHGYPDGAK--INFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLL 101 (706)
Q Consensus 24 i~~~~~~~~--~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l 101 (706)
+..+|.+.. .....|+ |+.|+.+.. ...+|.++|+++|+..+-. .+.. +-.-...++|+.|
T Consensus 46 v~~~phd~~~ftqGL~~~--~~~Ly~stG---------~~g~v~~iD~~Tgkv~~~~-l~~~-----~FgeGit~~g~~L 108 (268)
T 3nok_A 46 IREYPHATNAFTQGLVFH--QGHFFESTG---------HQGTLRQLSLESAQPVWME-RLGN-----IFAEGLASDGERL 108 (268)
T ss_dssp EEEEECCTTCCEEEEEEE--TTEEEEEET---------TTTEEEECCSSCSSCSEEE-ECTT-----CCEEEEEECSSCE
T ss_pred EEEEcCCCccccceEEEE--CCEEEEEcC---------CCCEEEEEECCCCcEEeEE-CCCC-----cceeEEEEeCCEE
Confidence 444454432 2456665 567754432 2234999999998765433 2321 1112245678777
Q ss_pred EEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC-CceecCCCceEee
Q 005240 102 IFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTPAVYTA 179 (706)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g-~~~~lt~~~~~~~ 179 (706)
+.... ....++++|. +. ....+..... .
T Consensus 109 y~ltw------------------------------------------------~~~~v~V~D~~Tl~~~~ti~~~~e--G 138 (268)
T 3nok_A 109 YQLTW------------------------------------------------TEGLLFTWSGMPPQRERTTRYSGE--G 138 (268)
T ss_dssp EEEES------------------------------------------------SSCEEEEEETTTTEEEEEEECSSC--C
T ss_pred EEEEc------------------------------------------------cCCEEEEEECCcCcEEEEEeCCCc--e
Confidence 76632 2268999998 55 3444443321 3
Q ss_pred eeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEE
Q 005240 180 VEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLY 258 (706)
Q Consensus 180 ~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~ 258 (706)
..+++||++|+.+. . ...|+++|..+.++ +++.-.... .+. .....+.|. ||+ ||
T Consensus 139 wGLt~Dg~~L~vSd-G------------s~~l~~iDp~T~~v~~~I~V~~~g--~~v------~~lNeLe~~-dG~--ly 194 (268)
T 3nok_A 139 WGLCYWNGKLVRSD-G------------GTMLTFHEPDGFALVGAVQVKLRG--QPV------ELINELECA-NGV--IY 194 (268)
T ss_dssp CCEEEETTEEEEEC-S------------SSEEEEECTTTCCEEEEEECEETT--EEC------CCEEEEEEE-TTE--EE
T ss_pred eEEecCCCEEEEEC-C------------CCEEEEEcCCCCeEEEEEEeCCCC--ccc------ccccccEEe-CCE--EE
Confidence 45568999887664 2 24899999886543 333222110 010 001134565 563 55
Q ss_pred EEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecc--------------cccccceecCCCceEEEEeeccccce
Q 005240 259 WVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLD--------------LRFRSVSWCDDSLALVNETWYKTSQT 324 (706)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--------------~~~~~~~wspDg~~l~~~~~~~~~~~ 324 (706)
+. .+..+.|.++|. +++++....... .....++|.|++++|+.+. + .+.
T Consensus 195 -an----------vw~s~~I~vIDp---~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG--K-~Wp 257 (268)
T 3nok_A 195 -AN----------IWHSSDVLEIDP---ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG--K-LWP 257 (268)
T ss_dssp -EE----------ETTCSEEEEECT---TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE--T-TCS
T ss_pred -EE----------ECCCCeEEEEeC---CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC--C-CCC
Confidence 32 123346888888 677765432211 2346789999998888754 2 567
Q ss_pred EEEEEcC
Q 005240 325 RTWLVCP 331 (706)
Q Consensus 325 ~l~~~d~ 331 (706)
+||.+.+
T Consensus 258 ~~~ev~~ 264 (268)
T 3nok_A 258 RLFEVRL 264 (268)
T ss_dssp EEEEEEE
T ss_pred ceEEEEE
Confidence 7887753
No 486
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.35 E-value=0.015 Score=55.42 Aligned_cols=206 Identities=14% Similarity=0.068 Sum_probs=115.9
Q ss_pred eeeecCCCCC--cccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCc
Q 005240 22 KEVHGYPDGA--KINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNST 99 (706)
Q Consensus 22 ~~i~~~~~~~--~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~ 99 (706)
+-+...|... ......|++ .+|+.+.. ..+...|.++|+++|+..+-...+.. +..-...++++
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~--~~LyestG-------~~g~S~v~~vD~~tgkv~~~~~l~~~-----~fgeGi~~~~~ 75 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR--GHLYESTG-------ETGRSSVRKVDLETGRILQRAEVPPP-----YFGAGIVAWRD 75 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET--TEEEEEEC-------CTTSCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEETT
T ss_pred EEEEEcCCCCccccccEEEEC--CEEEEECC-------CCCCceEEEEECCCCCEEEEEeCCCC-----cceeEEEEeCC
Confidence 3444444443 445778875 56644432 14568999999999987664433332 22223445677
Q ss_pred EEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc-CC-CceecCCCceE
Q 005240 100 LLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL-DG-TAKDFGTPAVY 177 (706)
Q Consensus 100 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l-~g-~~~~lt~~~~~ 177 (706)
+|+.... ....++++|. +. ....+..+.
T Consensus 76 ~ly~ltw------------------------------------------------~~~~v~v~D~~tl~~~~ti~~~~-- 105 (243)
T 3mbr_X 76 RLIQLTW------------------------------------------------RNHEGFVYDLATLTPRARFRYPG-- 105 (243)
T ss_dssp EEEEEES------------------------------------------------SSSEEEEEETTTTEEEEEEECSS--
T ss_pred EEEEEEe------------------------------------------------eCCEEEEEECCcCcEEEEEeCCC--
Confidence 7776531 2268999998 45 344454432
Q ss_pred eeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecCCCce
Q 005240 178 TAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (706)
Q Consensus 178 ~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~ 256 (706)
....+++||++|+.+. . ...|+++|..+.++ +++.-... ..|.. ....+.|. +|+
T Consensus 106 ~Gwglt~dg~~L~vSd-g------------s~~l~~iDp~t~~~~~~I~V~~~--g~~~~------~lNeLe~~-~G~-- 161 (243)
T 3mbr_X 106 EGWALTSDDSHLYMSD-G------------TAVIRKLDPDTLQQVGSIKVTAG--GRPLD------NLNELEWV-NGE-- 161 (243)
T ss_dssp CCCEEEECSSCEEEEC-S------------SSEEEEECTTTCCEEEEEECEET--TEECC------CEEEEEEE-TTE--
T ss_pred CceEEeeCCCEEEEEC-C------------CCeEEEEeCCCCeEEEEEEEccC--Ccccc------cceeeEEe-CCE--
Confidence 2345568999887654 3 24799999886543 33322211 01100 01123444 443
Q ss_pred EEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeec--------------ccccccceecCCCceEEEEeecccc
Q 005240 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKL--------------DLRFRSVSWCDDSLALVNETWYKTS 322 (706)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~--------------~~~~~~~~wspDg~~l~~~~~~~~~ 322 (706)
|| +. ++..+.|.++|. ++|++...... ......++|.|++++|+.+. + .
T Consensus 162 ly-an----------vw~s~~I~vIDp---~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG--K-~ 224 (243)
T 3mbr_X 162 LL-AN----------VWLTSRIARIDP---ASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG--K-R 224 (243)
T ss_dssp EE-EE----------ETTTTEEEEECT---TTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE--T-T
T ss_pred EE-EE----------ECCCCeEEEEEC---CCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC--C-C
Confidence 44 32 223346788887 66665443221 12346689999998888764 2 5
Q ss_pred ceEEEEEcCC
Q 005240 323 QTRTWLVCPG 332 (706)
Q Consensus 323 ~~~l~~~d~~ 332 (706)
+.+||.+.+.
T Consensus 225 wp~~~~v~~~ 234 (243)
T 3mbr_X 225 WPMLYEIRLT 234 (243)
T ss_dssp CSEEEEEEEC
T ss_pred CCcEEEEEEe
Confidence 6778887654
No 487
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.31 E-value=0.042 Score=55.32 Aligned_cols=130 Identities=8% Similarity=0.030 Sum_probs=73.7
Q ss_pred eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeec-CCC
Q 005240 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRA-DKP 254 (706)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~sp-dg~ 254 (706)
....++++|+...|++.... ..+.+++.+++..+.+...... .+. ..+..+.+.+ +|+
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~-------------~~i~~~d~~~g~~~~~~~~~~~--~~~------~~p~~i~~d~~~G~ 139 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCY-------------YHLSVVGSEGGHATQLATSVDG--VPF------KWLYAVTVDQRTGI 139 (322)
T ss_dssp CEEEEEEETTTTEEEEEETT-------------TEEEEECTTCEECEEEESEETT--EEC------SCEEEEEECTTTCC
T ss_pred CCceEEEcCCCCcEEEEECC-------------CCEEEEeCCCCEEEEecccCCC--Ccc------cccceEEEecCCCE
Confidence 45678888844456655432 2478888887766655432110 000 1123678888 885
Q ss_pred ceEEEEEeccCCCCcc------ccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEE
Q 005240 255 STLYWVEAQDRGDANV------EVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWL 328 (706)
Q Consensus 255 ~~l~~~~~~~~~~~~~------~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~ 328 (706)
||+........... .......|+++|. ++++.+.+.........++|+|||+.|++... ...+|++
T Consensus 140 --l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~---~~~~I~~ 211 (322)
T 2fp8_A 140 --VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---STKETTLLLKELHVPGGAEVSADSSFVLVAEF---LSHQIVK 211 (322)
T ss_dssp --EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET---TTTEEEEEEEEESCCCEEEECTTSSEEEEEEG---GGTEEEE
T ss_pred --EEEECCcccccccccceehcccCCCceEEEEeC---CCCEEEEeccCCccCcceEECCCCCEEEEEeC---CCCeEEE
Confidence 66553211000000 0012246888887 55665555443344567899999998877642 3457999
Q ss_pred EcCCCC
Q 005240 329 VCPGSK 334 (706)
Q Consensus 329 ~d~~~~ 334 (706)
+++++.
T Consensus 212 ~~~~~~ 217 (322)
T 2fp8_A 212 YWLEGP 217 (322)
T ss_dssp EESSST
T ss_pred EECCCC
Confidence 998863
No 488
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.29 E-value=0.013 Score=61.89 Aligned_cols=145 Identities=10% Similarity=0.040 Sum_probs=85.6
Q ss_pred cccceeeCCC--CCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEEecCCcEEEEEecCCC
Q 005240 32 KINFVSWSPD--GKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVWVNNSTLLIFTIPSSR 109 (706)
Q Consensus 32 ~~~~~~~SPD--G~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~ 109 (706)
....++|+|| +..|+++. .. ..|+++++++++.+.+..... .+..++|++||+ |++......
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D---------~~-~~I~~id~~~g~v~~~~~~~~-----~P~giavd~dG~-lyVad~~~~ 203 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVG---------QR-DAFRHVDFVNQYVDIKTTNIG-----QCADVNFTLNGD-MVVVDDQSS 203 (433)
T ss_dssp CCCEEEECTTTTTCEEEEEC---------BT-SCEEEEETTTTEEEEECCCCS-----CEEEEEECTTCC-EEEEECCSC
T ss_pred CCceEEEccccCCCEEEEEe---------CC-CCEEEEECCCCEEEEeecCCC-----CccEEEECCCCC-EEEEcCCCC
Confidence 3557899995 56675542 12 789999998888777643222 156889999999 666532110
Q ss_pred CCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCCCc---eecCCCceEeeeeeCCCC
Q 005240 110 RDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDGTA---KDFGTPAVYTAVEPSPDQ 186 (706)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g~~---~~lt~~~~~~~~~~SpDG 186 (706)
. ....++.++.++.. ..+........++++|++
T Consensus 204 ~--------------------------------------------~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~ 239 (433)
T 4hw6_A 204 D--------------------------------------------TNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQN 239 (433)
T ss_dssp T--------------------------------------------TSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTT
T ss_pred c--------------------------------------------ccceEEEEECCCCeeccccccccCCCCEEEEeCCC
Confidence 0 01234444443311 122222345678899966
Q ss_pred cEEEEEeeccCcccccccccccceEEEEecCCCee-EEcccCCCCCCCCcccCccCCCCcceeeecCCCceEEEE
Q 005240 187 KYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLV-RELCDLPPAEDIPVCYNSVREGMRSISWRADKPSTLYWV 260 (706)
Q Consensus 187 ~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~ 260 (706)
..|++.... ...|++++.+++.. +.+...... + ....++|+|+|+. ||+.
T Consensus 240 G~lyv~d~~------------~~~V~~~d~~~g~~~~~~~~~~~~---~--------~~~~ia~dpdG~~-LYva 290 (433)
T 4hw6_A 240 GKIYYTRYH------------HAMISSYDPATGTLTEEEVMMDTK---G--------SNFHIVWHPTGDW-AYII 290 (433)
T ss_dssp CCEEECBTT------------CSEEEEECTTTCCEEEEEEECSCC---S--------SCEEEEECTTSSE-EEEE
T ss_pred CeEEEEECC------------CCEEEEEECCCCeEEEEEeccCCC---C--------CcccEEEeCCCCE-EEEE
Confidence 678766543 24799999985555 444322110 0 1125899999986 7755
No 489
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.23 E-value=0.13 Score=49.64 Aligned_cols=115 Identities=14% Similarity=0.163 Sum_probs=69.0
Q ss_pred ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCC
Q 005240 175 AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKP 254 (706)
Q Consensus 175 ~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~ 254 (706)
..++.++|.||++.|+.+.+.. ..|+.++++++..+++.-....+ ...+++.+++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~------------~~I~~ld~~g~v~~~i~l~g~~D------------~EGIa~~~~g~ 82 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKP------------AAIVEMTTNGDLIRTIPLDFVKD------------LETIEYIGDNQ 82 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETT------------EEEEEEETTCCEEEEEECSSCSS------------EEEEEECSTTE
T ss_pred cCcceeEEeCCCCEEEEEECCC------------CeEEEEeCCCCEEEEEecCCCCC------------hHHeEEeCCCE
Confidence 4688999999999998777653 47999999977666653321111 22567776664
Q ss_pred ceEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEe---------ecccccccceecCCCceEEEEeeccccceE
Q 005240 255 STLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILH---------KLDLRFRSVSWCDDSLALVNETWYKTSQTR 325 (706)
Q Consensus 255 ~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~---------~~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 325 (706)
+ +++... ...+++++++ ..+....+. ........++|.|++.+|+... +. ....
T Consensus 83 --~-~vs~E~----------~~~l~~~~v~--~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~-E~-~p~~ 145 (255)
T 3qqz_A 83 --F-VISDER----------DYAIYVISLT--PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK-EK-NPIE 145 (255)
T ss_dssp --E-EEEETT----------TTEEEEEEEC--TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE-ES-SSEE
T ss_pred --E-EEEECC----------CCcEEEEEcC--CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE-Cc-CCce
Confidence 3 343221 1235565552 122222111 1123356889999998888764 33 2457
Q ss_pred EEEEc
Q 005240 326 TWLVC 330 (706)
Q Consensus 326 l~~~d 330 (706)
||.++
T Consensus 146 i~~~~ 150 (255)
T 3qqz_A 146 VYKVN 150 (255)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99998
No 490
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=97.23 E-value=0.00061 Score=69.46 Aligned_cols=77 Identities=9% Similarity=-0.000 Sum_probs=50.1
Q ss_pred HCCeEEEEcCCCCcCCCCCCCCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHh---CCCceeE
Q 005240 553 ARRFAVLAGPSIPIIGEGDKLPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAH---APHLFCC 629 (706)
Q Consensus 553 ~~G~~v~~~~~~~~~g~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~---~p~~~~a 629 (706)
..+|.|+..+.. |+|..............++...+..+. ...++.++||||||.++..++.+ .|++++.
T Consensus 125 ~~~~~v~~~d~~---g~~~~~~~~~~~~~~a~~~~~~i~~~~-----~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~ 196 (329)
T 3tej_A 125 DPQWSIIGIQSP---RPNGPMQTAANLDEVCEAHLATLLEQQ-----PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAF 196 (329)
T ss_dssp CTTCEEEEECCC---TTTSHHHHCSSHHHHHHHHHHHHHHHC-----SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCeEEEeeCC---CCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccE
Confidence 467888875554 333321111223444444444443321 12589999999999999999998 9999999
Q ss_pred EEeccCCC
Q 005240 630 GIARSGSY 637 (706)
Q Consensus 630 ~v~~~~~~ 637 (706)
++...+..
T Consensus 197 lvl~d~~~ 204 (329)
T 3tej_A 197 LGLLDTWP 204 (329)
T ss_dssp EEEESCCC
T ss_pred EEEeCCCC
Confidence 98887643
No 491
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.20 E-value=0.081 Score=53.52 Aligned_cols=289 Identities=12% Similarity=0.091 Sum_probs=0.0
Q ss_pred CCCCeeeeecCCCCC-cccceeeCCCCCeEEEEeeccccccccCC-ceeEEEEEcCCCceeecccCC--Cccccccccce
Q 005240 17 SLGPEKEVHGYPDGA-KINFVSWSPDGKRIAFSVRVDEEDNVSSC-KLRVWIADAETGEAKPLFESP--DICLNAVFGSF 92 (706)
Q Consensus 17 ~~g~~~~i~~~~~~~-~~~~~~~SPDG~~laf~~~~~~~~~~~~~-~~~l~~~d~~~g~~~~lt~~~--~~~~~~~~~~~ 92 (706)
+.+....++.+.++. ....++|.|||+.++- .. ...|++++.++++...+...+ ......+...+
T Consensus 17 ~~~~~~~~~~va~gL~~P~~ia~~pdG~llVt-----------er~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGi 85 (347)
T 3das_A 17 AKGSVKVLRTVATGLNSPWGLAPLPGGDLLVS-----------SRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGI 85 (347)
T ss_dssp SSCCEEEEEEEECCCSSEEEEEECTTSCEEEE-----------ETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEE
T ss_pred ccCCCceeEEeecCCCCceEEEEcCCCcEEEE-----------EecCCEEEEEECCCCcEeeecccCceeecCCCCceee
Q ss_pred EEecC---CcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC---
Q 005240 93 VWVNN---STLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG--- 166 (706)
Q Consensus 93 ~wSpD---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g--- 166 (706)
+++|| ..+||+....... ..|+++.+++
T Consensus 86 a~~Pdf~~~g~lYv~yt~~~~----------------------------------------------~~v~R~~~~~~~~ 119 (347)
T 3das_A 86 ALSPDYASDHMVYAYFTSASD----------------------------------------------NRIVRMLYDEKKP 119 (347)
T ss_dssp EECTTHHHHCEEEEEEECSSS----------------------------------------------EEEEEEEBCTTSC
T ss_pred EeccccccCCEEEEEEecCCC----------------------------------------------CEEEEEEeCCCCc
Q ss_pred ------CceecCCC------ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCC--------eeEEccc
Q 005240 167 ------TAKDFGTP------AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGK--------LVRELCD 226 (706)
Q Consensus 167 ------~~~~lt~~------~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~~~~l~~ 226 (706)
+.+.|... .....++|.|||+..+-+..................|++++.+++ ..+....
T Consensus 120 ~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~ 199 (347)
T 3das_A 120 SGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSY 199 (347)
T ss_dssp TTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEB
T ss_pred ccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEee
Q ss_pred CCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCccccCccceeeeecCCCCCCCC---------ceEEeec
Q 005240 227 LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEK---------PEILHKL 297 (706)
Q Consensus 227 ~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---------~~~l~~~ 297 (706)
+. ..+..++|.|+|. |++...-.....+...-..+.-|-|.. -.+. ...+...
T Consensus 200 G~-------------RNp~Gla~dp~G~--L~~~d~g~~~~deln~i~~G~nyGwP~---~~g~~~~~~~~~P~~~~~~~ 261 (347)
T 3das_A 200 GH-------------RNVQGLAWDDKQR--LFASEFGQDTWDELNAIKPGDNYGWPE---AEGKGGGSGFHDPVAQWSTD 261 (347)
T ss_dssp CC-------------SBCCEEEECTTCC--EEEEECCSSSCEEEEEECTTCBCCTTT---CCSSCCCTTCCCCSEEECTT
T ss_pred CC-------------CCcceEEECCCCC--EEEEecCCCCCceeeEEcCCCEecCCc---ccCCCCCccccCCcEecCCC
Q ss_pred ccccccceecCCCceEEEEeeccccceEEEEEcCCCCC--CCceeeecCcccccccCCCCCceEeccCCCEEEEeeeccC
Q 005240 298 DLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD--VAPRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKEN 375 (706)
Q Consensus 298 ~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 375 (706)
......+.|. +|..++... ...+|+++.+++.+ .++..+......-... +...|||...+.+.
T Consensus 262 ~~ap~G~~~~-~g~~~~~~l----~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~d------v~~~pDG~lyv~td---- 326 (347)
T 3das_A 262 EASPSGIAYA-EGSVWMAGL----RGERLWRIPLKGTAAAADPQAFLEGEYGRLRT------VAPAGGDKLWLVTS---- 326 (347)
T ss_dssp TCCEEEEEEE-TTEEEEEES----TTCSEEEEEEETTEESSCCEEESTTTSSCEEE------EEEEETTEEEEEEC----
T ss_pred CCCCcceEEE-cCceeeccc----cCCEEEEEEecCCceecceEEeecCCCCCccE------EEECCCCcEEEEEc----
Q ss_pred CcceEEEEecCC-CCCCCCCCceeeeecC
Q 005240 376 DEQIYILLNGRG-FTPEGNIPFLDLFDIN 403 (706)
Q Consensus 376 ~~~~~~~~~~~g-~~~~~~~~~l~~~d~~ 403 (706)
+.+| ..+....-.|+++.+.
T Consensus 327 --------~~~g~g~p~~~ddri~r~~~~ 347 (347)
T 3das_A 327 --------NTDGRGDAKGGDDRILELEVE 347 (347)
T ss_dssp --------TTSSSSCCCTTCSCEEEEEEC
T ss_pred --------CCCCCCCCCCCCCEEEEEeCC
No 492
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.18 E-value=0.015 Score=61.82 Aligned_cols=121 Identities=11% Similarity=0.104 Sum_probs=74.5
Q ss_pred ccceeeCC-CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecccCCCccccccccceEE-------ecCCcEEEEE
Q 005240 33 INFVSWSP-DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLFESPDICLNAVFGSFVW-------VNNSTLLIFT 104 (706)
Q Consensus 33 ~~~~~~SP-DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~~~~w-------SpDg~~l~~~ 104 (706)
...++++| ++..|+.+. .....|+++|++++....+.......++ .+..++| +++|++|++.
T Consensus 141 p~~la~dp~~~~~Lyv~~---------~~~~~i~~ID~~~~~v~~l~~~~~~~~~-~p~~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICY---------DGHKAIQLIDLKNRMLSSPLNINTIPTN-RIRSIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp EEEEEEETTEEEEEEEEE---------ETEEEEEEEETTTTEEEEEECCTTSSCS-BEEEEEECCCBTTTBCTTCEEEEE
T ss_pred CCEEEEccCCCCEEEEEE---------CCCCeEEEEECCCCEEEEEEccCccccC-CCcEEEEeecccccCCCCCEEEEE
Confidence 44678999 577774443 2246799999999888776543221122 2567889 9999988876
Q ss_pred ecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEcc--CCCc------eecCCCce
Q 005240 105 IPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSL--DGTA------KDFGTPAV 176 (706)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l--~g~~------~~lt~~~~ 176 (706)
....... .....++.++. +|.. +.+.....
T Consensus 211 d~~~~~~------------------------------------------~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~ 248 (496)
T 3kya_A 211 IDYDGKG------------------------------------------DESPSVYIIKRNADGTFDDRSDIQLIAAYKQ 248 (496)
T ss_dssp ECCCTTG------------------------------------------GGEEEEEEEECCTTSCCSTTSCEEEEEEESC
T ss_pred eCCCCCc------------------------------------------ccCceEEEEecCCCCceeecccceeeccCCC
Confidence 4321100 01134666644 2332 23332234
Q ss_pred EeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC
Q 005240 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (706)
Q Consensus 177 ~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 217 (706)
...++++|++++|+++.... .+|++++++
T Consensus 249 p~giavdp~~g~LYvtd~~~------------g~V~r~d~~ 277 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEK------------GQVFRLDLV 277 (496)
T ss_dssp CCCEEECTTTCCEEEEETTT------------TEEEEECHH
T ss_pred ceEEEEcCCCCeEEEEECCC------------CEEEEEecc
Confidence 45778999888998877543 479999987
No 493
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.047 Score=57.57 Aligned_cols=127 Identities=11% Similarity=0.074 Sum_probs=75.4
Q ss_pred CCeeeeecCCCCCcccceeeCCCCCeEEEEeeccccccccCCceeEEEEEcCCCce--eecccCCCccccccccceEEec
Q 005240 19 GPEKEVHGYPDGAKINFVSWSPDGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEA--KPLFESPDICLNAVFGSFVWVN 96 (706)
Q Consensus 19 g~~~~i~~~~~~~~~~~~~~SPDG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~lt~~~~~~~~~~~~~~~wSp 96 (706)
++.+.+. +.......++|+|||++|+.+... .......++.++.+++-. +.+..... ...++++|
T Consensus 169 ~~v~~~~--~~~~~P~~ia~d~~G~~lyvad~~-----~~~~~~~v~~~~~~g~~~~~~~l~~~~~------p~giavdp 235 (430)
T 3tc9_A 169 EYVSTVY--SGLSKVRTICWTHEADSMIITNDQ-----NNNDRPNNYILTRESGFKVITELTKGQN------CNGAETHP 235 (430)
T ss_dssp TEEEEEE--CCCSCEEEEEECTTSSEEEEEECC-----SCTTSEEEEEEEGGGTSCSEEEEEECSS------CCCEEECT
T ss_pred CEEEEEe--cCCCCcceEEEeCCCCEEEEEeCC-----CCcccceEEEEeCCCceeeeeeeccCCC------ceEEEEeC
Confidence 5555553 233456788999999988665421 011234566666655432 22322111 56778999
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccceEEEEccCC-CceecC-CC
Q 005240 97 NSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQLVLGSLDG-TAKDFG-TP 174 (706)
Q Consensus 97 Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~~l~g-~~~~lt-~~ 174 (706)
++..|++... ...+|++++.++ ....+. ..
T Consensus 236 ~~g~lyv~d~------------------------------------------------~~~~V~~~~~~~~~~~~~~~~~ 267 (430)
T 3tc9_A 236 INGELYFNSW------------------------------------------------NAGQVFRYDFTTQETTPLFTIQ 267 (430)
T ss_dssp TTCCEEEEET------------------------------------------------TTTEEEEEETTTTEEEEEEECS
T ss_pred CCCEEEEEEC------------------------------------------------CCCEEEEEECCCCcEEEEEEcC
Confidence 4444666521 126799999865 332332 11
Q ss_pred --ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCC
Q 005240 175 --AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDG 218 (706)
Q Consensus 175 --~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 218 (706)
.....++|+|||++|++..... ..|++++.++
T Consensus 268 ~~~~P~gia~~pdG~~lyv~d~~~------------~~I~~~~~d~ 301 (430)
T 3tc9_A 268 DSGWEFHIQFHPSGNYAYIVVVNQ------------HYILRSDYDW 301 (430)
T ss_dssp SSSCCEEEEECTTSSEEEEEETTT------------TEEEEEEEET
T ss_pred CCCcceeEEEcCCCCEEEEEECCC------------CEEEEEeCCc
Confidence 3466899999999998776442 4788887764
No 494
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=97.14 E-value=0.0019 Score=67.68 Aligned_cols=37 Identities=16% Similarity=0.077 Sum_probs=32.4
Q ss_pred CcEEEEEechHHHHHHHHHHh--------------------------CCCceeEEEeccCCCC
Q 005240 602 SRIAVGGHSYGAFMTAHLLAH--------------------------APHLFCCGIARSGSYN 638 (706)
Q Consensus 602 ~~i~i~G~S~GG~~a~~~~~~--------------------------~p~~~~a~v~~~~~~d 638 (706)
.++.++||||||.++..++.+ +|++++.++++++...
T Consensus 151 ~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~tP~~ 213 (431)
T 2hih_A 151 HPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIATPHN 213 (431)
T ss_dssp BCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEESCCTT
T ss_pred CCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEECCCCC
Confidence 689999999999999998866 6889999999987544
No 495
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=96.97 E-value=0.0042 Score=64.07 Aligned_cols=38 Identities=21% Similarity=0.265 Sum_probs=31.7
Q ss_pred CCcEEEEEechHHHHHHHHHHh-------------------CC------CceeEEEeccCCCC
Q 005240 601 PSRIAVGGHSYGAFMTAHLLAH-------------------AP------HLFCCGIARSGSYN 638 (706)
Q Consensus 601 ~~~i~i~G~S~GG~~a~~~~~~-------------------~p------~~~~a~v~~~~~~d 638 (706)
..++.++||||||.++..++.+ .| ++++.++..++...
T Consensus 103 ~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~tP~~ 165 (387)
T 2dsn_A 103 GGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIATPHD 165 (387)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCCTT
T ss_pred CCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECCCCC
Confidence 4789999999999999999872 35 78999999887554
No 496
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.95 E-value=0.041 Score=52.94 Aligned_cols=202 Identities=10% Similarity=-0.015 Sum_probs=103.4
Q ss_pred EeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCce
Q 005240 177 YTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPST 256 (706)
Q Consensus 177 ~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~~ 256 (706)
...+.++ ++.|+.+.... ..|.++|++++++..-. .+.. .......++++.
T Consensus 57 tqGL~~~--~~~Ly~stG~~------------g~v~~iD~~Tgkv~~~~-l~~~-------------~FgeGit~~g~~- 107 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQ------------GTLRQLSLESAQPVWME-RLGN-------------IFAEGLASDGER- 107 (268)
T ss_dssp EEEEEEE--TTEEEEEETTT------------TEEEECCSSCSSCSEEE-ECTT-------------CCEEEEEECSSC-
T ss_pred cceEEEE--CCEEEEEcCCC------------CEEEEEECCCCcEEeEE-CCCC-------------cceeEEEEeCCE-
Confidence 3466675 56777665442 25889999866543322 2210 112234566776
Q ss_pred EEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCCC
Q 005240 257 LYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKDV 336 (706)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~~ 336 (706)
||.+. +..+.++++|. ++.+...-..... .....++|++.|+.+. +...|+.+|+++.+.
T Consensus 108 Ly~lt-----------w~~~~v~V~D~---~Tl~~~~ti~~~~--eGwGLt~Dg~~L~vSd----Gs~~l~~iDp~T~~v 167 (268)
T 3nok_A 108 LYQLT-----------WTEGLLFTWSG---MPPQRERTTRYSG--EGWGLCYWNGKLVRSD----GGTMLTFHEPDGFAL 167 (268)
T ss_dssp EEEEE-----------SSSCEEEEEET---TTTEEEEEEECSS--CCCCEEEETTEEEEEC----SSSEEEEECTTTCCE
T ss_pred EEEEE-----------ccCCEEEEEEC---CcCcEEEEEeCCC--ceeEEecCCCEEEEEC----CCCEEEEEcCCCCeE
Confidence 76542 12346889998 4444332222222 2345567888877643 355799999998542
Q ss_pred CceeeecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecccch
Q 005240 337 APRVLFDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWESNRE 416 (706)
Q Consensus 337 ~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 416 (706)
..+......-..+. ...++.|. +| .|++.. .....|.++|+++|++...++..+-
T Consensus 168 ~~~I~V~~~g~~v~---~lNeLe~~-dG-~lyanv--------------------w~s~~I~vIDp~TG~V~~~Idl~~L 222 (268)
T 3nok_A 168 VGAVQVKLRGQPVE---LINELECA-NG-VIYANI--------------------WHSSDVLEIDPATGTVVGVIDASAL 222 (268)
T ss_dssp EEEEECEETTEECC---CEEEEEEE-TT-EEEEEE--------------------TTCSEEEEECTTTCBEEEEEECHHH
T ss_pred EEEEEeCCCCcccc---cccccEEe-CC-EEEEEE--------------------CCCCeEEEEeCCCCcEEEEEECCCC
Confidence 11111111100000 00112232 55 344332 1223688999999998877766431
Q ss_pred hhhhhhh--hhcc--CCCceecccCCCEEEEEEecCCCCcEEEEE
Q 005240 417 KYFETAV--ALVF--GQGEEDINLNQLKILTSKESKTEITQYHIL 457 (706)
Q Consensus 417 ~~~~~~~--~~~~--~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~ 457 (706)
..... .... .-+..+++|++++|+.+.-.- |.+|.+
T Consensus 223 --~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~W---p~~~ev 262 (268)
T 3nok_A 223 --TRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLW---PRLFEV 262 (268)
T ss_dssp --HHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTC---SEEEEE
T ss_pred --cccccccccCcCCceEEEEEcCCCCEEEEeCCCC---CceEEE
Confidence 00010 0000 112478899988888765444 445544
No 497
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=96.86 E-value=0.0041 Score=62.89 Aligned_cols=76 Identities=14% Similarity=0.071 Sum_probs=50.8
Q ss_pred HCCeEEEEcCCCCcCCCCCC-----CCchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEechHHHHHHHHHHhC----
Q 005240 553 ARRFAVLAGPSIPIIGEGDK-----LPNDRFVEQLVSSAEAAVEEVVRRGVADPSRIAVGGHSYGAFMTAHLLAHA---- 623 (706)
Q Consensus 553 ~~G~~v~~~~~~~~~g~g~~-----~~~~~~~~~~~~D~~~~~~~l~~~~~id~~~i~i~G~S~GG~~a~~~~~~~---- 623 (706)
..+|.|+..+.+ |+|.+ .......+....|+.+.++.+. ...++.++|||+||.+|..++.+.
T Consensus 115 ~~~~~v~~~d~~---G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~-----~~~p~~l~G~S~GG~vA~~~A~~l~~~~ 186 (319)
T 2hfk_A 115 QEERDFLAVPLP---GYGTGTGTGTALLPADLDTALDAQARAILRAA-----GDAPVVLLGHAGGALLAHELAFRLERAH 186 (319)
T ss_dssp TTTCCEEEECCT---TCCBC---CBCCEESSHHHHHHHHHHHHHHHH-----TTSCEEEEEETHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEecCC---CCCCCcccccCCCCCCHHHHHHHHHHHHHHhc-----CCCCEEEEEECHHHHHHHHHHHHHHHhh
Confidence 368888874443 44433 2223345566666666655442 125799999999999999999875
Q ss_pred CCceeEEEeccCC
Q 005240 624 PHLFCCGIARSGS 636 (706)
Q Consensus 624 p~~~~a~v~~~~~ 636 (706)
++.++.++...+.
T Consensus 187 g~~v~~lvl~d~~ 199 (319)
T 2hfk_A 187 GAPPAGIVLVDPY 199 (319)
T ss_dssp SCCCSEEEEESCC
T ss_pred CCCceEEEEeCCC
Confidence 4568888887753
No 498
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.70 E-value=0.17 Score=48.07 Aligned_cols=205 Identities=7% Similarity=-0.054 Sum_probs=106.1
Q ss_pred eEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecCCCeeEEcccCCCCCCCCcccCccCCCCcceeeecCCCc
Q 005240 176 VYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTDGKLVRELCDLPPAEDIPVCYNSVREGMRSISWRADKPS 255 (706)
Q Consensus 176 ~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~g~~~~~~spdg~~ 255 (706)
....+.|++ ..|+.+..... .+.|.++|++++++.+-...+. ........++++.
T Consensus 22 ftqGL~~~~--~~LyestG~~g----------~S~v~~vD~~tgkv~~~~~l~~-------------~~fgeGi~~~~~~ 76 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETG----------RSSVRKVDLETGRILQRAEVPP-------------PYFGAGIVAWRDR 76 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTT----------SCEEEEEETTTCCEEEEEECCT-------------TCCEEEEEEETTE
T ss_pred ccccEEEEC--CEEEEECCCCC----------CceEEEEECCCCCEEEEEeCCC-------------CcceeEEEEeCCE
Confidence 445777875 57766655432 3589999999776654333221 1112234455665
Q ss_pred eEEEEEeccCCCCccccCccceeeeecCCCCCCCCceEEeecccccccceecCCCceEEEEeeccccceEEEEEcCCCCC
Q 005240 256 TLYWVEAQDRGDANVEVSPRDIIYTQPAEPAEGEKPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCPGSKD 335 (706)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~~~~~ 335 (706)
||.+. +..+.++++|. ++.+...-..... .....++|++.|+.+. +...|+.+|+++.+
T Consensus 77 -ly~lt-----------w~~~~v~v~D~---~tl~~~~ti~~~~--~Gwglt~dg~~L~vSd----gs~~l~~iDp~t~~ 135 (243)
T 3mbr_X 77 -LIQLT-----------WRNHEGFVYDL---ATLTPRARFRYPG--EGWALTSDDSHLYMSD----GTAVIRKLDPDTLQ 135 (243)
T ss_dssp -EEEEE-----------SSSSEEEEEET---TTTEEEEEEECSS--CCCEEEECSSCEEEEC----SSSEEEEECTTTCC
T ss_pred -EEEEE-----------eeCCEEEEEEC---CcCcEEEEEeCCC--CceEEeeCCCEEEEEC----CCCeEEEEeCCCCe
Confidence 66442 12346889998 4443332222222 3345567888777642 34579999999853
Q ss_pred CCceee--ecCcccccccCCCCCceEeccCCCEEEEeeeccCCcceEEEEecCCCCCCCCCCceeeeecCCCceeeeecc
Q 005240 336 VAPRVL--FDRVFENVYSDPGSPMMTRTSTGTNVIAKIKKENDEQIYILLNGRGFTPEGNIPFLDLFDINTGSKERIWES 413 (706)
Q Consensus 336 ~~~~~l--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~d~~~g~~~~l~~~ 413 (706)
. ...+ .+... .+. ...++.| .+|+ |+... .....|.++|+++|++...++.
T Consensus 136 ~-~~~I~V~~~g~-~~~---~lNeLe~-~~G~-lyanv--------------------w~s~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 136 Q-VGSIKVTAGGR-PLD---NLNELEW-VNGE-LLANV--------------------WLTSRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp E-EEEEECEETTE-ECC---CEEEEEE-ETTE-EEEEE--------------------TTTTEEEEECTTTCBEEEEEEC
T ss_pred E-EEEEEEccCCc-ccc---cceeeEE-eCCE-EEEEE--------------------CCCCeEEEEECCCCCEEEEEEC
Confidence 1 1122 11100 000 0001222 1443 33322 1223688999999998777765
Q ss_pred cchhhhhhhhh----hccCCCceecccCCCEEEEEEecCCCCcEEEEEE
Q 005240 414 NREKYFETAVA----LVFGQGEEDINLNQLKILTSKESKTEITQYHILS 458 (706)
Q Consensus 414 ~~~~~~~~~~~----~~~~~~~~~~s~Dg~~l~~~~~~~~~p~~v~~~~ 458 (706)
.+- ...... ..+.-+..+++|++++|+.+.-.- |.+|.+.
T Consensus 189 ~~l--~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w---p~~~~v~ 232 (243)
T 3mbr_X 189 QAL--VPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW---PMLYEIR 232 (243)
T ss_dssp GGG--STTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC---SEEEEEE
T ss_pred CcC--ccccccccCCcCCceEEEEEcCCCCEEEEECCCC---CcEEEEE
Confidence 421 000000 000112478899988888775444 4555544
No 499
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.67 E-value=0.034 Score=56.55 Aligned_cols=160 Identities=17% Similarity=0.037 Sum_probs=91.6
Q ss_pred ceeEeecCCCCCCCCeeeeecCC--CC---CcccceeeCC--CCCeEEEEeeccccccccCCceeEEEEEcCCCceeecc
Q 005240 6 GIGIHRLLPDDSLGPEKEVHGYP--DG---AKINFVSWSP--DGKRIAFSVRVDEEDNVSSCKLRVWIADAETGEAKPLF 78 (706)
Q Consensus 6 ~~~~~~~~~~~~~g~~~~i~~~~--~~---~~~~~~~~SP--DG~~laf~~~~~~~~~~~~~~~~l~~~d~~~g~~~~lt 78 (706)
.|++.+++. .+++.+++.-.. .. -......+.+ ||+.-.|+.+.. ......+||.++.+++..+.+.
T Consensus 84 ~I~~~d~~~--~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~----~~~s~ielf~~d~~~~~~~~~~ 157 (355)
T 3sre_A 84 KILLMDLNE--KEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP----GSSSTVEVFKFQEEEKSLLHLK 157 (355)
T ss_dssp EEEEEETTS--SSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECS----TTCCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEecCC--CCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECC----CCCCeEEEEEEECCCCEEEEEe
Confidence 377878764 335666654211 11 1334445544 677666777632 1245577898988777666664
Q ss_pred cCCCccccccccceEEecCCcEEEEEecCCCCCCCCCCCCCCCCceeecCCCcccccccchhccCCchhhhhhhhcccce
Q 005240 79 ESPDICLNAVFGSFVWVNNSTLLIFTIPSSRRDPPKKTMVPLGPKIQSNEQKNIIISRMTDNLLKDEYDESLFDYYTTAQ 158 (706)
Q Consensus 79 ~~~~~~~~~~~~~~~wSpDg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 158 (706)
...+..++. ..+....+||+. +++...--.. + .+. ..+ .+.....+.
T Consensus 158 ~~~g~~~~~-pND~~v~~~G~f-yvt~~~~ftd------------------~------~~~------~~e-~~~~~~~g~ 204 (355)
T 3sre_A 158 TIRHKLLPS-VNDIVAVGPEHF-YATNDHYFID------------------P------YLK------SWE-MHLGLAWSF 204 (355)
T ss_dssp EECCTTCSS-EEEEEEEETTEE-EEEESCSCSS------------------H------HHH------HHH-HHTTCCCEE
T ss_pred ccccCCCCC-CceEEEeCCCCE-EecCCcEeCC------------------c------ccc------cch-hhccCCccE
Confidence 433333332 567888999984 4442110000 0 000 000 000113478
Q ss_pred EEEEccCCCceecCCC-ceEeeeeeCCCCcEEEEEeeccCcccccccccccceEEEEecC
Q 005240 159 LVLGSLDGTAKDFGTP-AVYTAVEPSPDQKYVLITSMHRPYSYKVPCARFSQKVQVWTTD 217 (706)
Q Consensus 159 l~~~~l~g~~~~lt~~-~~~~~~~~SpDG~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 217 (706)
||.++. ++.+.+..+ .....++|||||+.|++..... ..|++|+++
T Consensus 205 vyr~d~-~~~~~~~~~l~~pNGia~spDg~~lYvadt~~------------~~I~~~~~~ 251 (355)
T 3sre_A 205 VTYYSP-NDVRVVAEGFDFANGINISPDGKYVYIAELLA------------HKIHVYEKH 251 (355)
T ss_dssp EEEECT-TCCEEEEEEESSEEEEEECTTSSEEEEEEGGG------------TEEEEEEEC
T ss_pred EEEEEC-CeEEEeecCCcccCcceECCCCCEEEEEeCCC------------CeEEEEEEC
Confidence 999987 356655544 5677999999999999887653 589999886
No 500
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.66 E-value=0.12 Score=52.89 Aligned_cols=153 Identities=20% Similarity=0.207 Sum_probs=79.5
Q ss_pred ceEEEEccCCCceecC------CC-ceEeeeeeCCC---CcEEEEEeec-cCcccccccccccceEEEEecCCC-----e
Q 005240 157 AQLVLGSLDGTAKDFG------TP-AVYTAVEPSPD---QKYVLITSMH-RPYSYKVPCARFSQKVQVWTTDGK-----L 220 (706)
Q Consensus 157 ~~l~~~~l~g~~~~lt------~~-~~~~~~~~SpD---G~~i~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~-----~ 220 (706)
+.|++++.+|+ +.+. .+ .....++++|| +.+|++.... .... .....|.++++++. .
T Consensus 49 g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~------~~~~~v~r~~~~~~~~~~~~ 121 (354)
T 3a9g_A 49 GRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG------HIRNRVIRGRLDGSTFKLKE 121 (354)
T ss_dssp TEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG------CEEEEEEEEEECSSSCCEEE
T ss_pred CEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC------CcceEEEEEEECCCCcCcCc
Confidence 46777766664 3221 22 45678999998 7788766542 1100 00147888887754 1
Q ss_pred eEEccc-CCCCCCCCcccCccCCCCcceeeecCCCceEEEEEeccCCCCcc---ccCccceeeeecCCCCCCC-------
Q 005240 221 VRELCD-LPPAEDIPVCYNSVREGMRSISWRADKPSTLYWVEAQDRGDANV---EVSPRDIIYTQPAEPAEGE------- 289 (706)
Q Consensus 221 ~~~l~~-~~~~~~~p~~~~~~~~g~~~~~~spdg~~~l~~~~~~~~~~~~~---~~~~~~~l~~~d~~~~~~~------- 289 (706)
.+.+.. .+... .+....+.|.|||. ||+..- +.+.... .....+.|++++. ++.
T Consensus 122 ~~~l~~~~~~~~---------~h~~~~l~~~pDG~--Lyvt~G-~~~~~~~~~d~~~~~G~I~ri~~---dG~~p~~npf 186 (354)
T 3a9g_A 122 VKTLIDGIPGAY---------IHNGGRIRFGPDGM--LYITTG-DAADPRLAQDLSSLAGKILRVDE---EGRPPADNPF 186 (354)
T ss_dssp EEEEEEEEECCS---------SCCCCCEEECTTSC--EEEECC-CTTCGGGGTCTTCCSSEEEEECT---TSCCCTTSSS
T ss_pred cEEEEEcCCCCC---------CcCCceEEECCCCc--EEEEEC-CCCCCccccCCCCCCeEEEEEcC---CCCCCCCCCC
Confidence 222222 11100 02234789999995 776532 2211110 1123457888887 443
Q ss_pred -CceEEeecccccccceecCCCceEEEEeeccccceEEEEEcC
Q 005240 290 -KPEILHKLDLRFRSVSWCDDSLALVNETWYKTSQTRTWLVCP 331 (706)
Q Consensus 290 -~~~~l~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~l~~~d~ 331 (706)
..+.+...-.....++|.|+...|++..........|.++..
T Consensus 187 ~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 187 PNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK 229 (354)
T ss_dssp TTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT
T ss_pred CCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC
Confidence 223333334456678899954445554433333345666653
Done!