BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005242
(706 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3
PE=1 SV=3
Length = 939
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 216/390 (55%), Gaps = 28/390 (7%)
Query: 132 PMFLHSNATSHKWAFGAIAELLDNAIDEIQNGAAFVIVDKISNPRDGTPALLIQDDGGGM 191
P FLH+N+TSH W F A+AEL+DNA D N I + N L D+G GM
Sbjct: 16 PKFLHTNSTSHTWPFSAVAELIDNAYDPDVNAKQIWIDKTVINDH---ICLTFTDNGNGM 72
Query: 192 DPEAMRRCMSFGFSDKKSKS---VIGQYGNGFKTSSMRLGADVIVFSRHLNDRTLTQSIG 248
+ + + +SFGFSDK + + +G YGNGFK+ SMRLG D IVF+++ + S+G
Sbjct: 73 TSDKLHKMLSFGFSDKVTMNGHVPVGLYGNGFKSGSMRLGKDAIVFTKNGE----SMSVG 128
Query: 249 LLSYTFLTRTGHDRIVVPMVDYELNTSTGTVNALHGRDHFTLNLSLLLQWSPYSSETELL 308
LLS T+L + +VVP+V + N +N + +L+ +L+ S +S+E +LL
Sbjct: 129 LLSQTYLEVIKAEHVVVPIVAF--NKHRQMINLAESK----ASLAAILEHSLFSTEQKLL 182
Query: 309 KQFDDI-GHHGTKIIIYNLWFSDGGNMELDFDSDPEDIRIAGDVIN-KFDPGAFRQLHEQ 366
+ D I G GT+III+NL S E DF+ D DIRI D+ G +Q
Sbjct: 183 AELDAIIGKKGTRIIIWNLR-SYKNATEFDFEKDKYDIRIPEDLDEITGKKGYKKQERMD 241
Query: 367 HIANRFHYSLRVYLSILYLRIPESFSIKLRGKAVEHHNIANDLKYPEFILYRPQSAGCLE 426
IA YSLR Y SILYL+ I LRG+ V+ ++ L Y E +YRP+ L
Sbjct: 242 QIAPESDYSLRAYCSILYLK--PRMQIILRGQKVKTQLVSKSLAYIERDVYRPKF---LS 296
Query: 427 GTVITTIGF-LKDAPHISIHGFNVYHKNRLILPFWQVVSYSYRDSRGRGVVGVLEANFIE 485
TV T GF ++ H +G +YH+NRLI + +V ++ G GVVG++E NF++
Sbjct: 297 KTVRITFGFNCRNKDH---YGIMMYHRNRLIKAYEKVGCQLRANNMGVGVVGIIECNFLK 353
Query: 486 PTHSKQDFERTSLFQKLETRLKEMTWEYWD 515
PTH+KQDF+ T+ ++ T L E +YW+
Sbjct: 354 PTHNKQDFDYTNEYRLTITALGEKLNDYWN 383
>sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4 OS=Mus musculus GN=Morc4
PE=2 SV=2
Length = 928
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 216/421 (51%), Gaps = 43/421 (10%)
Query: 130 VHPMFLHSNATSHKWAFGAIAELLDNAID-EIQNGAAFVIVDKISNPRDGTPALLIQDDG 188
+ P +L SN++SH F AIAELLDNA+D ++ F+ V+++ P L DDG
Sbjct: 35 MSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVFIDVEEVKK----KPCLTFTDDG 90
Query: 189 GGMDPEAMRRCMSFGFSDK---KSKSVIGQYGNGFKTSSMRLGADVIVFSRHLNDRTLTQ 245
GM P + R +SFGF+DK KS+ IG +GNGFK+ SMRLG D +VF+++ N T
Sbjct: 91 CGMTPHKLHRMLSFGFTDKVIKKSQRPIGVFGNGFKSGSMRLGKDALVFTKNGN----TL 146
Query: 246 SIGLLSYTFLTRTGHDRIVVPMVDYELNTSTGTVNALHGRDHFTLNLSLLLQWSPYSSET 305
++GLLS T+L ++VP+V + V + +L +L +S ++ E
Sbjct: 147 AVGLLSQTYLECIQAQAVIVPIVPFSQQNKKMIVT-----EDSLPSLEAILNYSIFNCEK 201
Query: 306 ELLKQFDDI-GHHGTKIIIYNLWFSDGGNMELDFDSDPEDIRIAG-DVINKFDPGAFRQL 363
+LL QFD I G GT+++I+N+ + G ELDFD+D DI ++ D K G +L
Sbjct: 202 DLLSQFDAIPGKKGTRVLIWNIRRNKDGKSELDFDTDQYDILVSDFDAEEKEIGGVTSEL 261
Query: 364 HEQHIANRFHYSLRVYLSILYLRIPESFSIKLRGKAVEHHNIANDLKYPEFILYRPQSAG 423
E YSLR + SILY++ I LR K V IA L E+ +Y+P S
Sbjct: 262 PET------EYSLRAFCSILYMK--PRMKIFLRQKKVTTQMIAKSLANVEYDIYKPTSTN 313
Query: 424 CLEGTVITTIGFLKDAPHISIHGFNVYHKNRLILPFWQV-VSYSYRDSRGRGVVGVLEAN 482
V T GF + + G +YH NRLI F + G GV+GV+E N
Sbjct: 314 ---KQVRITFGF--SCKYHNQFGVMMYHNNRLIKAFEKAGCQLKPTCGEGVGVIGVIECN 368
Query: 483 FIEPTHSKQDFERTSLFQKLETRLKEMTWEYWDYHCELIGYQRKKKPQPSISPLASSYSM 542
F++P ++KQDFE T ++ L YW ++K Q + PL +S +
Sbjct: 369 FLKPAYNKQDFEYTKEYRLTINALARKLNAYW----------KEKISQENFEPLPTSRRI 418
Query: 543 P 543
P
Sbjct: 419 P 419
>sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4 OS=Homo sapiens GN=MORC4
PE=1 SV=2
Length = 937
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 207/393 (52%), Gaps = 35/393 (8%)
Query: 130 VHPMFLHSNATSHKWAFGAIAELLDNAID-EIQNGAAFVIVDKISNPRDGTPALLIQDDG 188
+ P +L SN++SH F AIAELLDNA+D ++ F+ V+++ N L DDG
Sbjct: 35 MSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVFIDVEEVKN----KSCLTFTDDG 90
Query: 189 GGMDPEAMRRCMSFGFSDK---KSKSVIGQYGNGFKTSSMRLGADVIVFSRHLNDRTLTQ 245
GM P + R +SFGF+DK KS+ IG +GNGFK+ SMRLG D +VF++ N TLT
Sbjct: 91 CGMTPHKLHRMLSFGFTDKVIKKSQCPIGVFGNGFKSGSMRLGKDALVFTK--NGGTLT- 147
Query: 246 SIGLLSYTFLTRTGHDRIVVPMVDYELNTSTGTVNALHGRDHFTLNLSLLLQWSPYSSET 305
+GLLS T+L ++VP+V + + + +L +L +S ++ E
Sbjct: 148 -VGLLSQTYLECVQAQAVIVPIVPFNQQNKKMIIT-----EDSLPSLEAILNYSIFNREN 201
Query: 306 ELLKQFDDI-GHHGTKIIIYNLWFSDGGNMELDFDSDPEDIRIAG-DVINKFDPGAFRQL 363
+LL QFD I G GT+++I+N+ + G ELDFD+D DI ++ D K G +L
Sbjct: 202 DLLAQFDAIPGKKGTRVLIWNIRRNKNGKSELDFDTDQYDILVSDFDTEEKMTGGVTSEL 261
Query: 364 HEQHIANRFHYSLRVYLSILYLRIPESFSIKLRGKAVEHHNIANDLKYPEFILYRPQSAG 423
E YSLR + ILY++ I LR K V IA L E+ Y+P
Sbjct: 262 PET------EYSLRAFCGILYMK--PRMKIFLRQKKVTTQMIAKSLANVEYDTYKPTFTN 313
Query: 424 CLEGTVITTIGFLKDAPHISIHGFNVYHKNRLILPFWQVVSYSYRDSRGR--GVVGVLEA 481
V T GF + + G +YH NRLI F + V + +RG GV+GV+E
Sbjct: 314 ---KQVRITFGF--SCKNSNQFGIMMYHNNRLIKSF-EKVGCQVKPTRGEGVGVIGVIEC 367
Query: 482 NFIEPTHSKQDFERTSLFQKLETRLKEMTWEYW 514
NF++P ++KQDFE T ++ L + YW
Sbjct: 368 NFLKPAYNKQDFEYTKEYRLTINALAQKLNAYW 400
>sp|Q86VD1|MORC1_HUMAN MORC family CW-type zinc finger protein 1 OS=Homo sapiens GN=MORC1
PE=2 SV=2
Length = 984
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 190/412 (46%), Gaps = 63/412 (15%)
Query: 134 FLHSNATSHKWAFGAIAELLDNAIDEIQNGAAFVIVDKISNPR-DGTPALLIQDDGGGMD 192
F+H+N+T+H + FGA+AELLDNA D GA + V + N + G L DDG GM
Sbjct: 17 FIHANSTTHSFLFGALAELLDNARDA---GAERLDVFSVDNEKLQGGFMLCFLDDGCGMS 73
Query: 193 PEAMRRCMSFGFSDKKSKSV--IGQYGNGFKTSSMRLGADVIVFSRHLNDRTLTQSIGLL 250
PE + FG S K+ ++ IGQYGNG K+ SMR+G D I+F++ + T +
Sbjct: 74 PEEASDIIYFGRSKKRLSTLKFIGQYGNGLKSGSMRIGKDFILFTK----KEETMTCVFF 129
Query: 251 SYTFLTRTGHDRIVVPMVDYELNTSTGTVNALHGRDHFTLNLSLLLQWSPYSSETELLKQ 310
S TF +VVPM + + T + F + LS++ ++SP+ +E EL++Q
Sbjct: 130 SQTFCEEESLSEVVVPMPSWLIRTRESVTD---DPQKFAMELSIIYKYSPFKTEAELMQQ 186
Query: 311 FDDI-GHHGTKIIIYNLWFSDGGNMELDFDSDPEDIRIAGDV--------------INKF 355
FD I G GT ++IYNL G ELD +D EDI +AG + + F
Sbjct: 187 FDVIYGKCGTLLVIYNLKLLLNGEPELDVKTDKEDILMAGALEDFPARWSFRAYTSVLYF 246
Query: 356 DPGAFRQLHEQHIANRFHYSLRVYLSILYLRIPESFSIKLR---GKAVEHHNIA------ 406
+P + + + + H +Y YL + SF + KA E IA
Sbjct: 247 NPWMRIFIQAKRVKTK-HLCYCLYRPRKYLYVTSSFKGAFKDEVKKAEEAVKIAESILKE 305
Query: 407 ----------NDLKYPEFILYRP-QSAGCLEGTVITTIGFLKDAPHISI-HGFNV----- 449
L + +L R + + + LK A +S+ +G NV
Sbjct: 306 AQIKVNQCDRTSLSSAKDVLQRALEDVEAKQKNLKEKQRELKTARTLSLFYGVNVENRSQ 365
Query: 450 -----YHKNRLILPFWQVVS-YSYRDSRGRGVVGVLEA--NFIEPTHSKQDF 493
Y NRLI +V S + G GVVG++ +EP+H+KQ+F
Sbjct: 366 AGMFIYSNNRLIKMHEKVGSQLKLKSLLGAGVVGIVNIPLEVMEPSHNKQEF 417
>sp|Q9WVL5|MORC1_MOUSE MORC family CW-type zinc finger protein 1 OS=Mus musculus GN=Morc1
PE=2 SV=1
Length = 950
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 149/298 (50%), Gaps = 36/298 (12%)
Query: 119 ATLQNGKNFLHVHPMFLHSNATSHKWAFGAIAELLDNAIDEIQNGAAFVIVDKISNPR-D 177
A LQ K +H F+H+N+T+H + FGA+AELLDNA D GA + V + N
Sbjct: 5 ALLQRAK----LHLDFIHANSTTHSFLFGALAELLDNARDA---GAVRLDVFSVDNETLQ 57
Query: 178 GTPALLIQDDGGGMDPEAMRRCMSFGFSDKKSKSV--IGQYGNGFKTSSMRLGADVIVFS 235
G L DDG GM P+ + FG S K+ ++ IGQYGNG K+ SMR+G D I+F+
Sbjct: 58 GGFMLCFLDDGCGMSPDEASDVIYFGTSKKRLSTLKFIGQYGNGLKSGSMRIGKDCILFT 117
Query: 236 RHLNDRTLTQSIGLLSYTFLTRTGHDRIVVPMVDYELNTSTGTVNALHGRDHFTLNLSLL 295
+ + T + S TF + G +VVP+ + T + F LS++
Sbjct: 118 K----KEETMTCLFFSQTFCEKEGLTEVVVPIPSWLTRTRESITD---DPQKFFTELSII 170
Query: 296 LQWSPYSSETELLKQFDDI-GHHGTKIIIYNLWFSDGGNMELDFDSDPEDIRIAGDVINK 354
++SP+ +E EL++QFD I G GT +IIYNL G ELD +D EDI +A
Sbjct: 171 FKYSPFKTEAELMQQFDMIYGRCGTLLIIYNLKLLLSGEPELDVTTDKEDILMA------ 224
Query: 355 FDPGAFRQLHEQHIANRFHYSLRVYLSILYLRIPESFSIKLRGKAVEHHNIANDLKYP 412
A ++ E+ S R Y ++LY I ++ K V+ ++ L P
Sbjct: 225 ---EAPEEIPERR-------SFRAYTAVLYFE--PRMKIFIQAKRVQTKHLCYSLYKP 270
>sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2 OS=Homo sapiens GN=MORC2
PE=1 SV=2
Length = 1032
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 34/290 (11%)
Query: 134 FLHSNATSHKWAFGAIAELLDNAIDEIQNGAAFVIVDKISNPRD---GTPALLIQDDGGG 190
+LH+N+T+H++ FGA+AEL+DNA D A +D + R+ G L DDG G
Sbjct: 18 YLHTNSTTHEFLFGALAELVDNARD-----ADATRIDIYAERREDLRGGFMLCFLDDGAG 72
Query: 191 MDPEAMRRCMSFGFSDKKS--KSVIGQYGNGFKTSSMRLGADVIVFSRHLNDRTLTQSIG 248
MDP + FG S K++ + IGQYGNG K+ SMR+G D I+F++ + T +
Sbjct: 73 MDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFTKKED----TMTCL 128
Query: 249 LLSYTFLTRTGHDRIVVPMVDYELNTSTGTVNALHGRDHFTLNLSLLLQWSPYSSETELL 308
LS TF G D ++VP+ + T + + + F + L+ ++SP+ +E E++
Sbjct: 129 FLSRTFHEEEGIDEVIVPLPTWNARTREPVTDNV---EKFAIETELIYKYSPFRTEEEVM 185
Query: 309 KQFDDI-GHHGTKIIIYNLWFSDGGNMELDFDSDPEDIRIAGDVINKFDPGAFRQLHEQH 367
QF I G GT +II+NL D G ELD S+P DI++A P
Sbjct: 186 TQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQMAETSPEGTKPE--------- 236
Query: 368 IANRFHYSLRVYLSILYLRIPESFSIKLRGKAVEHHNIANDLKYPEFILY 417
S R Y ++LY I I + G V+ ++ L P Y
Sbjct: 237 -----RRSFRAYAAVLY--IDPRMRIFIHGHKVQTKRLSCCLYKPRMYKY 279
>sp|Q8C5W4|MOR2B_MOUSE MORC family CW-type zinc finger protein 2B OS=Mus musculus
GN=Morc2b PE=2 SV=2
Length = 1022
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 18/221 (8%)
Query: 134 FLHSNATSHKWAFGAIAELLDNAIDEIQNGAAFVIVDKISNPRD---GTPALLIQDDGGG 190
+LH+N+T+H + FGA+AEL+DNA D A +D + R+ G L D+G G
Sbjct: 18 YLHTNSTTHAFLFGALAELIDNARD-----ADATRIDIYAEKREDLQGGFMLCFLDNGVG 72
Query: 191 MDPEAMRRCMSFGFSDKKS--KSVIGQYGNGFKTSSMRLGADVIVFSRHLNDRTLTQSIG 248
MDP + + FG S K++ + IG+YGNG K+ SMR+G D I+F++ N T S
Sbjct: 73 MDPNDVINVIQFGKSAKRTPESTQIGRYGNGLKSGSMRIGKDFILFTKKEN----TMSCL 128
Query: 249 LLSYTFLTRTGHDRIVVPMVDYELNTSTGTVNALHGRDHFTLNLSLLLQWSPYSSETELL 308
LS TF G D ++VP+ + T + + + F + L+ ++SP+ +E E++
Sbjct: 129 FLSRTFHEEEGIDEVIVPLPTWNSQTREPVTDNM---EKFAIETELIYKYSPFHTEEEVM 185
Query: 309 KQFDDI-GHHGTKIIIYNLWFSDGGNMELDFDSDPEDIRIA 348
QF I G GT ++I+NL +D G ELD S+P+DIR+A
Sbjct: 186 TQFTKISGTSGTLVVIFNLKLTDNGEPELDVTSNPKDIRMA 226
>sp|Q69ZX6|MOR2A_MOUSE MORC family CW-type zinc finger protein 2A OS=Mus musculus
GN=Morc2a PE=1 SV=2
Length = 1030
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 145/290 (50%), Gaps = 34/290 (11%)
Query: 134 FLHSNATSHKWAFGAIAELLDNAIDEIQNGAAFVIVDKISNPRD---GTPALLIQDDGGG 190
+LH+N+T+H++ FGA+AEL+DNA D A +D + R+ G L DDG G
Sbjct: 18 YLHTNSTTHEFLFGALAELVDNARD-----ADATRIDIYAERREDLRGGFMLCFLDDGAG 72
Query: 191 MDPEAMRRCMSFGFSDKKS--KSVIGQYGNGFKTSSMRLGADVIVFSRHLNDRTLTQSIG 248
MDP + FG S K++ + IGQYGNG K+ SMR+G D I+F++ + T +
Sbjct: 73 MDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFTKKED----TMTCL 128
Query: 249 LLSYTFLTRTGHDRIVVPMVDYELNTSTGTVNALHGRDHFTLNLSLLLQWSPYSSETELL 308
LS TF G D ++VP+ + T + + + F + L+ ++SP+ +E +++
Sbjct: 129 FLSRTFHEEEGIDEVIVPLPTWNARTREPITDNV---EKFAIETELVYKYSPFHTEEQVM 185
Query: 309 KQFDDI-GHHGTKIIIYNLWFSDGGNMELDFDSDPEDIRIAGDVINKFDPGAFRQLHEQH 367
QF I G+ GT +II+NL D G ELD S+P+DI++A P
Sbjct: 186 NQFMKIPGNSGTLVIIFNLKLMDNGEPELDIISNPKDIQMAETSPEGTKPE--------- 236
Query: 368 IANRFHYSLRVYLSILYLRIPESFSIKLRGKAVEHHNIANDLKYPEFILY 417
S R Y ++LY I I + G V+ ++ L P Y
Sbjct: 237 -----RRSFRAYAAVLY--IDPRMRIFIHGHKVQTKRLSCCLYKPRMYKY 279
>sp|P0C865|MK07_RAT Mitogen-activated protein kinase 7 OS=Rattus norvegicus GN=Mapk7
PE=1 SV=1
Length = 806
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 26/139 (18%)
Query: 493 FERTSLFQKLETRLKE-MTWEYWDYHCELIGYQRKKKPQPSISPLASSYSMPRSGIHQPV 551
F+R +L ++ R+KE + E D+H G +++ + QPS+ P+AS P + P
Sbjct: 367 FDREALTRE---RIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPVCP--DVEMPS 421
Query: 552 VWDQSSTATGITKAPAAAPCQLAAPNSC--FVEGAGPLT----PNSEGIIGQ-------- 597
W S + PA PC AP++ ++ A P + P EG I
Sbjct: 422 PWAPSGDCAMESPPPALPPCSGPAPDTVDLTLQPAPPASELAPPKREGAISDNTKAALKA 481
Query: 598 ------RSRKRKGCRDSLE 610
RSR R G LE
Sbjct: 482 ALLKSLRSRLRDGPSAPLE 500
>sp|Q9WVS8|MK07_MOUSE Mitogen-activated protein kinase 7 OS=Mus musculus GN=Mapk7 PE=1
SV=1
Length = 806
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 26/139 (18%)
Query: 493 FERTSLFQKLETRLKE-MTWEYWDYHCELIGYQRKKKPQPSISPLASSYSMPRSGIHQPV 551
F+R +L ++ R+KE + E D+H G +++ + QPS+ P+AS P + P
Sbjct: 367 FDREALTRE---RIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPVCP--DVEMPS 421
Query: 552 VWDQSSTATGITKAPAAAPCQLAAPNSC--FVEGAGPLT----PNSEGIIGQ-------- 597
W S + PA PC AP++ ++ A P + P EG I
Sbjct: 422 PWAPSGDCAMESPPPALPPCSDPAPDTVDLTLQPAPPASELAPPKREGAISDNTKAALKA 481
Query: 598 ------RSRKRKGCRDSLE 610
RSR R G LE
Sbjct: 482 ALLKSLRSRLRDGPSAPLE 500
>sp|Q07980|MLH2_YEAST DNA mismatch repair protein MLH2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MLH2 PE=1 SV=1
Length = 695
Score = 33.1 bits (74), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 147 GAIAELLDNAIDEIQNGAAFVIVDKISNPRDGTPALLIQDDGGGMD 192
A+ ELLDN+ID +GA V +D + + G + ++DDG G+D
Sbjct: 25 AAVRELLDNSID---SGAKKVFID-VDSTTGGCEYISVKDDGSGVD 66
>sp|B5YI20|ATPF_THEYD ATP synthase subunit b OS=Thermodesulfovibrio yellowstonii (strain
ATCC 51303 / DSM 11347 / YP87) GN=atpF PE=3 SV=1
Length = 188
Score = 32.7 bits (73), Expect = 9.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 603 KGCRDSLEFEKVKMQASKGVDAVDDEPSAETHPAVTSTDQLRDSATIILMQENEKLRAKC 662
K R+S E +++ +A + V+ E + + ++ + I ++QE+EKL+ K
Sbjct: 69 KSIRESQEAKELAQKALQEVEEKLKLKDKEVQDILDTAKKIGEQEKIQIVQESEKLKEKI 128
Query: 663 LEYEKRRVELDQKVTQ 678
LE K +E + K+ +
Sbjct: 129 LEQAKTNIEFEVKMAK 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 274,516,664
Number of Sequences: 539616
Number of extensions: 12126597
Number of successful extensions: 34861
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 34769
Number of HSP's gapped (non-prelim): 82
length of query: 706
length of database: 191,569,459
effective HSP length: 125
effective length of query: 581
effective length of database: 124,117,459
effective search space: 72112243679
effective search space used: 72112243679
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)