Query 005245
Match_columns 706
No_of_seqs 147 out of 177
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 19:45:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005245hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s9f_A Tryparedoxin; thioredox 99.4 7.4E-13 2.5E-17 124.3 13.6 125 333-474 36-164 (165)
2 1i5g_A Tryparedoxin II; electr 99.4 1.3E-12 4.3E-17 117.9 13.8 125 333-473 15-143 (144)
3 1o73_A Tryparedoxin; electron 99.4 2.8E-12 9.7E-17 115.1 14.4 124 333-473 16-143 (144)
4 1o8x_A Tryparedoxin, TRYX, TXN 99.4 1.9E-12 6.3E-17 117.3 12.5 125 333-474 16-144 (146)
5 2lus_A Thioredoxion; CR-Trp16, 98.7 1.3E-11 4.5E-16 110.0 0.0 115 334-464 12-132 (143)
6 2lrt_A Uncharacterized protein 99.0 6.6E-10 2.3E-14 102.2 9.8 107 333-457 22-130 (152)
7 3eur_A Uncharacterized protein 99.0 4.1E-10 1.4E-14 101.4 7.7 106 333-457 18-130 (142)
8 4fo5_A Thioredoxin-like protei 99.0 6.4E-10 2.2E-14 100.2 6.9 109 333-457 19-130 (143)
9 2lrn_A Thiol:disulfide interch 99.0 4.8E-09 1.6E-13 95.4 12.6 109 333-457 16-126 (152)
10 3fw2_A Thiol-disulfide oxidore 98.9 4.9E-09 1.7E-13 95.2 11.7 108 333-457 18-133 (150)
11 3ewl_A Uncharacterized conserv 98.9 1.4E-09 4.8E-14 97.2 7.5 104 333-455 14-124 (142)
12 2ggt_A SCO1 protein homolog, m 98.9 3.8E-08 1.3E-12 89.7 14.2 114 334-456 11-142 (164)
13 3raz_A Thioredoxin-related pro 98.8 1.5E-08 5.1E-13 92.1 10.8 105 334-455 12-120 (151)
14 3fkf_A Thiol-disulfide oxidore 98.8 1.5E-08 5.1E-13 90.2 10.3 110 333-457 18-131 (148)
15 3gl3_A Putative thiol:disulfid 98.8 1.3E-08 4.5E-13 91.7 8.8 103 335-456 17-121 (152)
16 3hcz_A Possible thiol-disulfid 98.8 2.5E-09 8.6E-14 95.3 3.2 107 333-456 18-127 (148)
17 2rli_A SCO2 protein homolog, m 98.8 1.3E-07 4.5E-12 86.9 14.4 114 334-456 14-145 (171)
18 2lja_A Putative thiol-disulfid 98.7 1.3E-08 4.4E-13 91.7 7.3 106 333-456 17-124 (152)
19 2f9s_A Thiol-disulfide oxidore 98.7 2.2E-08 7.4E-13 90.6 7.5 105 333-456 13-119 (151)
20 3eyt_A Uncharacterized protein 98.7 5.7E-08 1.9E-12 88.3 9.8 113 335-456 17-133 (158)
21 4evm_A Thioredoxin family prot 98.7 3.8E-08 1.3E-12 85.4 7.9 110 333-456 9-120 (138)
22 3me7_A Putative uncharacterize 98.7 1.2E-07 4.2E-12 89.3 11.6 115 332-456 14-142 (170)
23 2v1m_A Glutathione peroxidase; 98.7 2.6E-07 8.8E-12 84.6 13.4 118 333-456 18-148 (169)
24 2vup_A Glutathione peroxidase- 98.7 1.2E-07 4.2E-12 90.3 11.5 118 333-456 35-166 (190)
25 3lor_A Thiol-disulfide isomera 98.6 6.8E-08 2.3E-12 87.7 8.8 115 334-456 18-136 (160)
26 3or5_A Thiol:disulfide interch 98.6 8.2E-08 2.8E-12 87.4 9.2 108 333-456 21-132 (165)
27 3hdc_A Thioredoxin family prot 98.6 1.3E-07 4.4E-12 86.7 10.0 120 332-473 27-155 (158)
28 3erw_A Sporulation thiol-disul 98.6 8.6E-08 2.9E-12 84.8 8.5 104 333-455 22-129 (145)
29 2h30_A Thioredoxin, peptide me 98.6 2.7E-08 9.4E-13 90.7 5.1 111 331-456 23-137 (164)
30 3drn_A Peroxiredoxin, bacterio 98.6 2.4E-07 8.1E-12 85.7 11.2 104 333-456 15-126 (161)
31 1lu4_A Soluble secreted antige 98.6 6.3E-08 2.2E-12 84.9 6.9 101 333-454 11-113 (136)
32 3ha9_A Uncharacterized thiored 98.6 7.4E-08 2.5E-12 88.5 7.6 105 334-455 25-145 (165)
33 2p5q_A Glutathione peroxidase 98.6 4.4E-07 1.5E-11 83.2 12.4 117 333-456 19-149 (170)
34 2b7k_A SCO1 protein; metalloch 98.6 3.1E-07 1.1E-11 88.7 11.9 114 333-456 28-160 (200)
35 3dwv_A Glutathione peroxidase- 98.6 1.2E-07 4.1E-12 90.4 8.7 115 333-456 33-164 (187)
36 3kcm_A Thioredoxin family prot 98.6 1.4E-07 4.8E-12 85.1 8.6 106 333-456 15-122 (154)
37 3ztl_A Thioredoxin peroxidase; 98.6 2E-07 6.9E-12 91.9 10.4 113 325-456 43-175 (222)
38 3cmi_A Peroxiredoxin HYR1; thi 98.6 3.1E-07 1E-11 85.6 10.9 117 334-456 20-149 (171)
39 3lwa_A Secreted thiol-disulfid 98.5 2E-07 7E-12 87.4 9.5 113 335-456 48-162 (183)
40 2bmx_A Alkyl hydroperoxidase C 98.5 1E-07 3.5E-12 91.2 7.5 101 337-456 36-147 (195)
41 1xzo_A BSSCO, hypothetical pro 98.5 6.5E-07 2.2E-11 82.5 12.4 114 333-456 20-151 (174)
42 2ls5_A Uncharacterized protein 97.9 1E-08 3.4E-13 93.8 0.0 105 334-456 21-130 (159)
43 1jfu_A Thiol:disulfide interch 98.5 5.8E-07 2E-11 84.3 12.0 109 333-456 47-159 (186)
44 2b5x_A YKUV protein, TRXY; thi 98.5 5.4E-07 1.9E-11 79.8 11.2 117 325-456 4-126 (148)
45 2obi_A PHGPX, GPX-4, phospholi 98.5 5.8E-07 2E-11 84.8 12.0 117 333-456 34-165 (183)
46 1zzo_A RV1677; thioredoxin fol 98.5 1.1E-07 3.9E-12 82.8 6.7 100 334-454 13-115 (136)
47 2gs3_A PHGPX, GPX-4, phospholi 98.5 6.3E-07 2.2E-11 85.0 12.3 117 333-456 36-167 (185)
48 3gkn_A Bacterioferritin comigr 98.5 4.6E-07 1.6E-11 83.2 10.9 103 333-455 22-139 (163)
49 1xvw_A Hypothetical protein RV 98.5 1E-07 3.4E-12 87.2 5.7 106 333-456 22-137 (160)
50 3u5r_E Uncharacterized protein 98.5 1.2E-07 4E-12 93.1 6.2 111 332-456 44-159 (218)
51 3kij_A Probable glutathione pe 98.5 1.7E-06 5.7E-11 81.6 13.4 116 333-456 25-151 (180)
52 2cvb_A Probable thiol-disulfid 98.5 3.1E-07 1.1E-11 86.5 8.1 108 333-456 20-132 (188)
53 2l5o_A Putative thioredoxin; s 98.5 3.3E-07 1.1E-11 82.5 8.0 105 333-455 15-121 (153)
54 1we0_A Alkyl hydroperoxide red 98.4 6E-07 2.1E-11 85.0 9.3 100 338-456 23-134 (187)
55 1zof_A Alkyl hydroperoxide-red 98.4 1.8E-07 6.3E-12 89.5 5.4 108 335-456 18-138 (198)
56 2h01_A 2-Cys peroxiredoxin; th 98.4 3.5E-07 1.2E-11 87.1 7.0 104 335-457 17-137 (192)
57 1qmv_A Human thioredoxin perox 98.4 6E-07 2.1E-11 86.0 8.3 101 337-456 25-140 (197)
58 3ia1_A THIO-disulfide isomeras 98.4 1.1E-06 3.9E-11 79.3 9.6 106 333-457 18-126 (154)
59 3kh7_A Thiol:disulfide interch 98.4 3.7E-07 1.3E-11 86.1 6.5 98 337-456 49-148 (176)
60 2k6v_A Putative cytochrome C o 98.4 7.6E-07 2.6E-11 81.7 8.4 113 333-457 23-153 (172)
61 1uul_A Tryparedoxin peroxidase 98.4 7.5E-07 2.6E-11 85.8 8.6 101 337-456 27-142 (202)
62 4hde_A SCO1/SENC family lipopr 98.4 2.1E-06 7.2E-11 81.3 11.4 114 332-455 18-148 (170)
63 3qpm_A Peroxiredoxin; oxidored 98.3 1.9E-06 6.4E-11 86.7 11.2 113 325-456 51-183 (240)
64 1zye_A Thioredoxin-dependent p 98.3 6.5E-07 2.2E-11 88.2 7.7 105 333-456 43-162 (220)
65 3ixr_A Bacterioferritin comigr 98.3 8.7E-07 3E-11 84.1 8.3 103 334-456 39-156 (179)
66 2c0d_A Thioredoxin peroxidase 98.3 1.5E-06 5E-11 86.4 10.0 103 335-456 42-161 (221)
67 2i81_A 2-Cys peroxiredoxin; st 98.3 1.6E-06 5.4E-11 85.3 9.8 103 335-456 38-157 (213)
68 2ywi_A Hypothetical conserved 98.3 3.8E-07 1.3E-11 86.1 5.0 109 333-456 32-146 (196)
69 2f8a_A Glutathione peroxidase 98.3 3.7E-06 1.3E-10 82.4 11.7 129 322-456 20-188 (208)
70 3idv_A Protein disulfide-isome 98.3 3.9E-06 1.3E-10 81.3 11.7 153 344-548 30-193 (241)
71 2p31_A CL683, glutathione pero 98.3 4E-06 1.4E-10 79.3 11.2 113 333-456 36-162 (181)
72 2pn8_A Peroxiredoxin-4; thiore 98.3 1.1E-06 3.6E-11 86.3 7.4 104 335-457 37-155 (211)
73 1kng_A Thiol:disulfide interch 98.3 2.5E-06 8.6E-11 76.8 8.8 101 337-456 33-133 (156)
74 2hyx_A Protein DIPZ; thioredox 98.2 1.3E-06 4.4E-11 93.3 7.1 110 333-456 69-180 (352)
75 2b1k_A Thiol:disulfide interch 98.2 5E-06 1.7E-10 76.5 9.7 100 335-456 39-141 (168)
76 2r37_A Glutathione peroxidase 98.2 1.2E-05 4.2E-10 79.1 13.0 117 334-456 25-174 (207)
77 2i3y_A Epididymal secretory gl 98.2 1.1E-05 3.9E-10 80.1 12.7 117 334-456 43-192 (215)
78 2jsy_A Probable thiol peroxida 98.2 1.1E-06 3.7E-11 81.3 4.5 103 333-457 31-144 (167)
79 1n8j_A AHPC, alkyl hydroperoxi 98.1 7.7E-06 2.6E-10 78.2 10.0 103 335-456 17-133 (186)
80 1xvq_A Thiol peroxidase; thior 98.1 2.5E-06 8.4E-11 80.4 6.0 102 333-457 31-145 (175)
81 3p7x_A Probable thiol peroxida 98.1 8.1E-06 2.8E-10 75.9 9.2 102 333-456 33-144 (166)
82 1psq_A Probable thiol peroxida 98.1 1.4E-05 4.8E-10 74.1 10.1 103 333-457 29-142 (163)
83 3tjj_A Peroxiredoxin-4; thiore 98.1 6.9E-06 2.4E-10 83.6 8.1 113 325-456 65-197 (254)
84 4g2e_A Peroxiredoxin; redox pr 98.0 5.5E-06 1.9E-10 77.1 6.7 104 333-456 17-134 (157)
85 3hxs_A Thioredoxin, TRXP; elec 98.0 1.9E-05 6.6E-10 70.6 9.5 80 334-455 39-120 (141)
86 2a4v_A Peroxiredoxin DOT5; yea 98.0 1.8E-05 6E-10 72.8 9.4 102 333-456 20-132 (159)
87 3zrd_A Thiol peroxidase; oxido 98.0 5.4E-06 1.9E-10 80.6 5.2 103 333-456 65-180 (200)
88 2yzh_A Probable thiol peroxida 98.0 1.8E-05 6.1E-10 73.8 8.5 101 333-456 34-148 (171)
89 1tp9_A Peroxiredoxin, PRX D (t 98.0 1.1E-05 3.8E-10 75.1 7.1 111 325-456 7-142 (162)
90 1nm3_A Protein HI0572; hybrid, 98.0 0.00011 3.9E-09 72.4 14.6 171 335-552 19-211 (241)
91 1q98_A Thiol peroxidase, TPX; 97.9 2.7E-05 9.3E-10 72.4 8.5 104 333-457 30-146 (165)
92 2l57_A Uncharacterized protein 97.8 4.7E-05 1.6E-09 67.0 8.1 75 341-455 21-97 (126)
93 1z6n_A Hypothetical protein PA 97.8 2.9E-05 1E-09 74.3 7.0 76 340-455 48-125 (167)
94 3ul3_B Thioredoxin, thioredoxi 97.8 7E-05 2.4E-09 66.5 8.9 85 328-455 24-110 (128)
95 2wfc_A Peroxiredoxin 5, PRDX5; 97.8 7.8E-05 2.7E-09 70.6 9.4 103 333-456 17-138 (167)
96 3a2v_A Probable peroxiredoxin; 97.7 2.3E-05 7.9E-10 80.0 5.4 100 338-456 22-139 (249)
97 2ju5_A Thioredoxin disulfide i 97.7 1.1E-05 3.8E-10 74.7 2.8 93 333-456 34-132 (154)
98 1prx_A HORF6; peroxiredoxin, h 97.7 0.00014 4.7E-09 72.4 10.8 103 334-456 19-146 (224)
99 4gqc_A Thiol peroxidase, perox 97.7 1.6E-05 5.3E-10 75.0 3.4 104 333-456 18-136 (164)
100 2v2g_A Peroxiredoxin 6; oxidor 97.7 8E-05 2.7E-09 74.9 8.7 103 334-456 17-142 (233)
101 3f9u_A Putative exported cytoc 97.7 1.7E-05 5.9E-10 73.8 3.4 99 342-456 43-146 (172)
102 1xcc_A 1-Cys peroxiredoxin; un 97.7 8.8E-05 3E-09 73.5 8.5 102 335-456 20-143 (220)
103 2fwh_A Thiol:disulfide interch 97.6 8.4E-05 2.9E-09 66.8 6.8 78 338-454 23-105 (134)
104 3fk8_A Disulphide isomerase; A 97.6 5.5E-05 1.9E-09 67.1 5.4 74 344-456 27-107 (133)
105 2l5l_A Thioredoxin; structural 97.4 0.00032 1.1E-08 62.9 8.2 68 345-454 37-106 (136)
106 3uma_A Hypothetical peroxiredo 97.3 0.00021 7.1E-09 69.2 5.7 129 324-480 28-180 (184)
107 2voc_A Thioredoxin; electron t 97.3 0.00039 1.3E-08 60.1 6.5 68 345-455 16-85 (112)
108 3mng_A Peroxiredoxin-5, mitoch 97.3 0.00043 1.5E-08 66.3 7.3 104 333-457 29-153 (173)
109 1nsw_A Thioredoxin, TRX; therm 97.3 0.00067 2.3E-08 57.0 7.5 68 345-455 16-85 (105)
110 3tue_A Tryparedoxin peroxidase 97.3 0.00076 2.6E-08 68.0 9.2 115 327-455 31-161 (219)
111 3die_A Thioredoxin, TRX; elect 97.2 0.00088 3E-08 56.1 7.9 68 345-455 18-87 (106)
112 1thx_A Thioredoxin, thioredoxi 97.2 0.0011 3.7E-08 56.4 8.5 68 345-455 24-93 (115)
113 2trx_A Thioredoxin; electron t 97.2 0.00076 2.6E-08 57.0 7.3 68 345-455 19-88 (108)
114 2kuc_A Putative disulphide-iso 97.2 0.00041 1.4E-08 60.9 5.8 78 338-455 19-101 (130)
115 3cxg_A Putative thioredoxin; m 97.2 0.00033 1.1E-08 63.2 4.9 73 341-455 35-110 (133)
116 3d6i_A Monothiol glutaredoxin- 97.2 0.0009 3.1E-08 57.2 7.4 69 345-455 20-90 (112)
117 2yzu_A Thioredoxin; redox prot 97.1 0.0012 4.3E-08 55.1 8.0 68 345-455 17-86 (109)
118 2i4a_A Thioredoxin; acidophIle 97.1 0.0012 4.1E-08 55.4 7.8 68 345-455 19-88 (107)
119 1t00_A Thioredoxin, TRX; redox 97.1 0.0011 3.8E-08 56.5 7.7 68 345-455 22-91 (112)
120 1dby_A Chloroplast thioredoxin 97.1 0.0015 5.1E-08 55.1 8.3 68 345-455 18-87 (107)
121 1xwb_A Thioredoxin; dimerizati 97.1 0.0012 4.1E-08 55.2 7.4 69 344-455 18-88 (106)
122 1w4v_A Thioredoxin, mitochondr 97.1 0.0013 4.5E-08 57.4 7.8 68 345-455 30-99 (119)
123 1zma_A Bacterocin transport ac 97.1 0.0011 3.6E-08 57.7 7.0 72 345-455 28-101 (118)
124 1x5d_A Protein disulfide-isome 97.1 0.0013 4.5E-08 57.6 7.6 71 345-454 24-96 (133)
125 3f3q_A Thioredoxin-1; His TAG, 97.0 0.0014 4.7E-08 56.6 7.5 67 345-455 23-91 (109)
126 1x5e_A Thioredoxin domain cont 97.0 0.0011 3.8E-08 58.1 6.8 68 344-454 21-90 (126)
127 3tco_A Thioredoxin (TRXA-1); d 97.0 0.002 6.8E-08 54.0 8.0 68 345-455 20-89 (109)
128 3gnj_A Thioredoxin domain prot 97.0 0.0017 5.7E-08 55.0 7.6 67 345-454 21-89 (111)
129 3qou_A Protein YBBN; thioredox 97.0 0.0012 4E-08 66.2 7.6 68 345-455 25-94 (287)
130 3sbc_A Peroxiredoxin TSA1; alp 97.0 0.001 3.4E-08 67.0 7.0 109 333-455 39-157 (216)
131 2e0q_A Thioredoxin; electron t 97.0 0.002 7E-08 53.2 7.7 67 345-455 15-83 (104)
132 2o8v_B Thioredoxin 1; disulfid 97.0 0.00096 3.3E-08 59.7 5.9 68 345-455 39-108 (128)
133 2oe3_A Thioredoxin-3; electron 96.9 0.0019 6.6E-08 56.4 7.6 67 345-455 29-97 (114)
134 3qfa_C Thioredoxin; protein-pr 96.9 0.0013 4.3E-08 57.6 6.2 68 344-455 29-98 (116)
135 1gh2_A Thioredoxin-like protei 96.9 0.0021 7.1E-08 54.6 7.3 67 345-455 20-88 (107)
136 2l6c_A Thioredoxin; oxidoreduc 96.9 0.0039 1.3E-07 53.8 9.2 69 345-455 18-86 (110)
137 2lst_A Thioredoxin; structural 96.0 0.00014 4.9E-09 64.0 0.0 78 336-453 9-92 (130)
138 4euy_A Uncharacterized protein 96.9 0.0012 4.2E-08 56.1 5.8 67 345-455 17-85 (105)
139 3uvt_A Thioredoxin domain-cont 96.9 0.0015 5.1E-08 55.2 6.2 73 345-455 20-92 (111)
140 1ep7_A Thioredoxin CH1, H-type 96.9 0.002 6.9E-08 54.7 7.1 67 346-455 24-92 (112)
141 1xfl_A Thioredoxin H1; AT3G510 96.9 0.0025 8.6E-08 56.5 8.0 67 345-455 37-105 (124)
142 1fb6_A Thioredoxin M; electron 96.9 0.0028 9.6E-08 52.9 7.7 68 345-455 17-86 (105)
143 2dj3_A Protein disulfide-isome 96.9 0.0012 4E-08 58.2 5.5 69 345-453 24-94 (133)
144 2pu9_C TRX-F, thioredoxin F-ty 96.9 0.0017 5.7E-08 55.6 6.3 69 344-455 22-92 (111)
145 2dj1_A Protein disulfide-isome 96.9 0.0023 7.8E-08 56.8 7.4 70 345-454 33-104 (140)
146 3aps_A DNAJ homolog subfamily 96.8 0.0019 6.6E-08 56.0 6.7 68 345-454 20-89 (122)
147 2dml_A Protein disulfide-isome 96.8 0.0031 1E-07 55.3 8.1 66 345-452 34-101 (130)
148 2wz9_A Glutaredoxin-3; protein 96.8 0.0023 7.7E-08 58.8 7.5 67 345-455 31-99 (153)
149 3d22_A TRXH4, thioredoxin H-ty 96.8 0.0018 6.2E-08 57.7 6.5 68 344-455 44-113 (139)
150 3m9j_A Thioredoxin; oxidoreduc 96.8 0.002 6.8E-08 54.0 6.4 68 344-455 18-87 (105)
151 2f51_A Thioredoxin; electron t 96.8 0.0018 6.3E-08 56.8 6.2 66 346-454 23-93 (118)
152 1sen_A Thioredoxin-like protei 96.8 0.0003 1E-08 66.1 1.1 99 339-482 39-141 (164)
153 1qgv_A Spliceosomal protein U5 96.8 0.0015 5.2E-08 59.9 5.7 69 345-456 22-92 (142)
154 1syr_A Thioredoxin; SGPP, stru 96.8 0.0036 1.2E-07 53.8 7.8 67 345-455 25-93 (112)
155 2i1u_A Thioredoxin, TRX, MPT46 96.7 0.0042 1.5E-07 53.4 7.8 68 345-455 29-98 (121)
156 3zzx_A Thioredoxin; oxidoreduc 96.7 0.003 1E-07 55.3 7.0 70 345-456 19-88 (105)
157 2dj0_A Thioredoxin-related tra 96.7 0.0036 1.2E-07 56.0 7.5 69 345-455 25-101 (137)
158 2ppt_A Thioredoxin-2; thiredox 96.7 0.0033 1.1E-07 58.4 7.4 68 345-455 63-132 (155)
159 2pwj_A Mitochondrial peroxired 96.7 0.0064 2.2E-07 57.4 9.5 100 337-456 33-150 (171)
160 2vlu_A Thioredoxin, thioredoxi 96.7 0.0039 1.3E-07 54.0 7.4 67 345-455 33-101 (122)
161 3gix_A Thioredoxin-like protei 96.7 0.0022 7.5E-08 59.3 5.9 67 345-454 22-90 (149)
162 3ph9_A Anterior gradient prote 96.6 0.00085 2.9E-08 63.4 3.0 93 344-483 42-139 (151)
163 1r26_A Thioredoxin; redox-acti 96.6 0.0042 1.4E-07 55.5 7.3 67 345-455 36-104 (125)
164 3hz4_A Thioredoxin; NYSGXRC, P 96.6 0.0037 1.3E-07 56.4 7.1 67 346-455 24-92 (140)
165 3p2a_A Thioredoxin 2, putative 96.6 0.0049 1.7E-07 55.7 7.7 69 344-455 53-123 (148)
166 3keb_A Probable thiol peroxida 96.6 0.0077 2.6E-07 60.8 9.6 100 333-457 35-153 (224)
167 1mek_A Protein disulfide isome 96.5 0.002 6.7E-08 54.9 4.5 70 345-454 23-94 (120)
168 1faa_A Thioredoxin F; electron 96.5 0.0049 1.7E-07 53.6 6.8 69 344-455 35-105 (124)
169 2j23_A Thioredoxin; immune pro 96.5 0.0048 1.6E-07 54.1 6.7 70 345-456 32-103 (121)
170 1ti3_A Thioredoxin H, PTTRXH1; 96.5 0.0062 2.1E-07 51.6 7.2 67 345-455 25-93 (113)
171 1v98_A Thioredoxin; oxidoreduc 96.5 0.0082 2.8E-07 53.7 8.3 68 345-455 49-118 (140)
172 2vm1_A Thioredoxin, thioredoxi 96.4 0.0065 2.2E-07 51.9 7.2 67 345-455 27-95 (118)
173 3h79_A Thioredoxin-like protei 96.4 0.013 4.3E-07 51.6 9.2 72 345-453 32-105 (127)
174 2vim_A Thioredoxin, TRX; thior 96.4 0.0084 2.9E-07 49.8 7.5 67 345-455 18-86 (104)
175 1a8l_A Protein disulfide oxido 96.4 0.025 8.4E-07 54.3 11.8 154 343-547 19-180 (226)
176 3apo_A DNAJ homolog subfamily 96.4 0.016 5.5E-07 66.5 12.0 145 342-546 451-604 (780)
177 3apq_A DNAJ homolog subfamily 96.4 0.0077 2.6E-07 58.0 7.9 68 344-454 112-181 (210)
178 1oaz_A Thioredoxin 1; immune s 96.3 0.0017 5.9E-08 57.8 2.9 68 345-455 20-103 (123)
179 3emx_A Thioredoxin; structural 96.3 0.005 1.7E-07 55.3 5.9 77 344-455 30-106 (135)
180 3q6o_A Sulfhydryl oxidase 1; p 96.2 0.0089 3E-07 58.8 7.8 70 346-452 30-101 (244)
181 2xc2_A Thioredoxinn; oxidoredu 96.2 0.0055 1.9E-07 52.9 5.6 69 344-455 31-99 (117)
182 4eo3_A Bacterioferritin comigr 96.2 0.0094 3.2E-07 62.6 8.1 101 333-455 11-116 (322)
183 3uem_A Protein disulfide-isome 96.1 0.022 7.4E-07 59.0 10.3 151 346-546 135-310 (361)
184 2dbc_A PDCL2, unnamed protein 96.1 0.0062 2.1E-07 55.0 5.3 64 345-455 29-94 (135)
185 3dxb_A Thioredoxin N-terminall 96.0 0.0074 2.5E-07 58.9 5.9 68 345-455 29-98 (222)
186 3idv_A Protein disulfide-isome 96.0 0.018 6.2E-07 55.4 8.5 71 345-455 146-218 (241)
187 1a8l_A Protein disulfide oxido 95.9 0.029 9.9E-07 53.8 9.7 71 345-454 133-205 (226)
188 1wou_A Thioredoxin -related pr 95.9 0.011 3.6E-07 52.3 5.7 76 345-455 23-107 (123)
189 3ira_A Conserved protein; meth 95.8 0.032 1.1E-06 54.0 9.2 82 341-456 34-120 (173)
190 2djj_A PDI, protein disulfide- 95.6 0.042 1.4E-06 47.2 8.4 69 345-453 24-94 (121)
191 1fo5_A Thioredoxin; disulfide 95.4 0.013 4.5E-07 47.1 4.1 62 347-453 3-66 (85)
192 2yj7_A LPBCA thioredoxin; oxid 94.3 0.003 1E-07 52.4 0.0 68 345-455 18-87 (106)
193 1nho_A Probable thioredoxin; b 95.3 0.016 5.5E-07 46.6 4.4 60 349-453 4-65 (85)
194 3t58_A Sulfhydryl oxidase 1; o 95.0 0.046 1.6E-06 61.1 8.4 71 346-453 30-105 (519)
195 4f82_A Thioredoxin reductase; 94.9 0.039 1.3E-06 53.7 6.5 101 335-457 35-155 (176)
196 1wmj_A Thioredoxin H-type; str 94.7 0.006 2E-07 53.1 0.3 67 345-455 35-103 (130)
197 2qsi_A Putative hydrogenase ex 94.6 0.097 3.3E-06 49.2 8.1 71 345-456 31-104 (137)
198 2es7_A Q8ZP25_salty, putative 94.3 0.066 2.3E-06 49.5 6.4 66 346-455 34-105 (142)
199 3f8u_A Protein disulfide-isome 94.2 0.045 1.5E-06 59.0 5.8 67 345-452 369-437 (481)
200 3ed3_A Protein disulfide-isome 94.2 0.066 2.3E-06 55.1 6.8 74 345-458 34-109 (298)
201 2qgv_A Hydrogenase-1 operon pr 93.8 0.16 5.5E-06 47.8 8.0 70 345-455 33-105 (140)
202 2ywm_A Glutaredoxin-like prote 93.8 1.1 3.9E-05 42.9 14.2 43 505-548 135-178 (229)
203 1a0r_P Phosducin, MEKA, PP33; 93.7 0.051 1.8E-06 55.2 4.7 90 345-483 132-223 (245)
204 2hls_A Protein disulfide oxido 93.5 0.24 8.3E-06 49.3 9.2 71 343-454 135-207 (243)
205 1ilo_A Conserved hypothetical 93.5 0.22 7.5E-06 39.3 7.2 59 350-456 3-63 (77)
206 2trc_P Phosducin, MEKA, PP33; 93.1 0.13 4.5E-06 50.8 6.4 91 345-482 119-209 (217)
207 3apo_A DNAJ homolog subfamily 93.1 0.11 3.7E-06 59.7 6.6 67 345-454 674-742 (780)
208 3iv4_A Putative oxidoreductase 93.1 0.27 9.2E-06 44.8 7.9 70 346-456 24-96 (112)
209 2dlx_A UBX domain-containing p 92.8 0.52 1.8E-05 44.5 9.8 72 345-456 41-118 (153)
210 2ywm_A Glutaredoxin-like prote 92.4 0.35 1.2E-05 46.5 8.3 63 345-453 135-199 (229)
211 3uem_A Protein disulfide-isome 92.0 0.13 4.4E-06 53.2 5.0 40 345-389 266-307 (361)
212 2e7p_A Glutaredoxin; thioredox 91.2 0.37 1.3E-05 41.3 6.3 68 345-455 18-85 (116)
213 3dml_A Putative uncharacterize 91.0 0.069 2.4E-06 48.7 1.4 73 344-455 16-90 (116)
214 3qcp_A QSOX from trypanosoma b 90.9 0.3 1E-05 54.3 6.6 69 346-452 42-116 (470)
215 1o73_A Tryparedoxin; electron 90.4 0.79 2.7E-05 40.2 7.8 59 496-556 20-81 (144)
216 3f8u_A Protein disulfide-isome 90.2 0.43 1.5E-05 51.3 7.0 65 346-453 21-87 (481)
217 1i5g_A Tryparedoxin II; electr 89.9 0.43 1.5E-05 42.2 5.6 52 505-556 27-81 (144)
218 1o8x_A Tryparedoxin, TRYX, TXN 89.8 0.45 1.5E-05 42.3 5.7 52 505-556 27-81 (146)
219 3kp8_A Vkorc1/thioredoxin doma 89.5 0.02 6.7E-07 50.3 -3.5 35 338-374 4-38 (106)
220 4fo5_A Thioredoxin-like protei 89.4 0.63 2.2E-05 41.1 6.4 53 505-557 31-85 (143)
221 2r2j_A Thioredoxin domain-cont 89.3 0.5 1.7E-05 49.7 6.5 74 345-455 21-96 (382)
222 2b5e_A Protein disulfide-isome 88.7 0.95 3.3E-05 49.1 8.4 66 345-452 30-97 (504)
223 3s9f_A Tryparedoxin; thioredox 88.3 0.98 3.3E-05 41.6 7.0 58 498-557 42-102 (165)
224 1v58_A Thiol:disulfide interch 88.0 3.3 0.00011 41.0 11.2 101 345-453 96-212 (241)
225 1eej_A Thiol:disulfide interch 87.8 2 7E-05 41.6 9.3 95 344-454 84-193 (216)
226 1v5n_A PDI-like hypothetical p 87.4 0.1 3.6E-06 45.5 -0.2 18 466-483 1-18 (89)
227 2av4_A Thioredoxin-like protei 85.9 0.98 3.3E-05 43.6 5.7 66 346-454 41-108 (160)
228 1sji_A Calsequestrin 2, calseq 85.9 1.5 5.2E-05 45.3 7.7 71 345-454 27-102 (350)
229 3fkf_A Thiol-disulfide oxidore 85.3 1.5 5.2E-05 38.1 6.3 50 505-556 32-86 (148)
230 3us3_A Calsequestrin-1; calciu 85.3 1.9 6.4E-05 45.3 8.0 72 345-454 29-104 (367)
231 3evi_A Phosducin-like protein 85.1 0.76 2.6E-05 41.2 4.2 88 346-482 23-110 (118)
232 3hcz_A Possible thiol-disulfid 83.9 1.2 4.1E-05 38.8 4.9 52 505-558 30-85 (148)
233 3q6o_A Sulfhydryl oxidase 1; p 83.9 0.57 1.9E-05 45.9 3.1 45 409-457 178-222 (244)
234 1t3b_A Thiol:disulfide interch 83.9 3.7 0.00013 39.8 8.9 95 345-454 85-193 (211)
235 3gyk_A 27KDA outer membrane pr 83.8 2.5 8.5E-05 38.8 7.3 30 343-372 19-50 (175)
236 3eur_A Uncharacterized protein 83.6 1.7 5.7E-05 38.3 5.8 54 505-558 30-88 (142)
237 2lrn_A Thiol:disulfide interch 83.6 1.5 5.3E-05 39.0 5.6 52 505-556 28-81 (152)
238 3die_A Thioredoxin, TRX; elect 82.6 2.8 9.7E-05 34.3 6.5 47 505-551 18-65 (106)
239 3gl3_A Putative thiol:disulfid 82.6 2.4 8.1E-05 37.3 6.4 52 505-556 27-80 (152)
240 3tco_A Thioredoxin (TRXA-1); d 82.5 2.2 7.4E-05 35.2 5.8 51 501-551 16-67 (109)
241 2lrt_A Uncharacterized protein 82.1 1.5 5E-05 39.6 4.9 52 505-556 34-87 (152)
242 3or5_A Thiol:disulfide interch 81.6 2.2 7.4E-05 38.0 5.8 52 505-556 33-86 (165)
243 2yzu_A Thioredoxin; redox prot 81.1 2.6 8.8E-05 34.6 5.7 47 503-549 15-62 (109)
244 1nsw_A Thioredoxin, TRX; therm 80.6 3 0.0001 34.4 5.9 47 503-549 14-61 (105)
245 2b5e_A Protein disulfide-isome 80.4 2 6.8E-05 46.6 6.1 30 345-374 375-406 (504)
246 3fw2_A Thiol-disulfide oxidore 80.3 2.9 0.0001 37.0 6.2 52 505-556 32-88 (150)
247 1zzo_A RV1677; thioredoxin fol 80.2 3 0.0001 35.5 6.0 52 505-557 24-76 (136)
248 2i4a_A Thioredoxin; acidophIle 80.1 4.1 0.00014 33.4 6.7 46 504-549 18-64 (107)
249 2hls_A Protein disulfide oxido 79.8 17 0.0006 35.8 12.2 42 505-546 137-183 (243)
250 3ga4_A Dolichyl-diphosphooligo 79.8 7.2 0.00025 37.8 9.2 72 345-453 36-116 (178)
251 1ttz_A Conserved hypothetical 79.5 6.2 0.00021 33.5 7.7 22 350-373 3-24 (87)
252 3ha9_A Uncharacterized thiored 79.3 2.7 9.3E-05 37.8 5.7 41 505-546 36-77 (165)
253 2trx_A Thioredoxin; electron t 79.0 4.7 0.00016 33.3 6.7 45 504-548 18-63 (108)
254 2k8s_A Thioredoxin; dimer, str 78.8 3.1 0.00011 33.6 5.4 18 434-454 49-66 (80)
255 1t00_A Thioredoxin, TRX; redox 78.6 4 0.00014 34.1 6.2 47 504-550 21-68 (112)
256 4evm_A Thioredoxin family prot 78.2 5.3 0.00018 33.6 6.9 39 505-543 21-60 (138)
257 1dby_A Chloroplast thioredoxin 78.2 4.2 0.00014 33.6 6.1 47 504-550 17-64 (107)
258 3erw_A Sporulation thiol-disul 77.9 4.4 0.00015 34.9 6.4 43 505-547 33-77 (145)
259 3ul3_B Thioredoxin, thioredoxi 77.8 3.6 0.00012 35.8 5.9 47 503-549 39-86 (128)
260 1xwb_A Thioredoxin; dimerizati 77.6 5.8 0.0002 32.4 6.8 45 505-549 19-64 (106)
261 1thx_A Thioredoxin, thioredoxi 77.4 3.9 0.00013 34.0 5.8 47 504-550 23-70 (115)
262 2i1u_A Thioredoxin, TRX, MPT46 77.2 4.5 0.00015 34.1 6.2 46 504-549 28-74 (121)
263 3ewl_A Uncharacterized conserv 77.2 3.9 0.00013 35.6 5.9 52 505-556 26-82 (142)
264 2f9s_A Thiol-disulfide oxidore 77.0 4.5 0.00015 35.7 6.3 52 505-556 25-78 (151)
265 3raz_A Thioredoxin-related pro 77.0 4.2 0.00014 36.1 6.1 55 498-555 18-74 (151)
266 3lor_A Thiol-disulfide isomera 76.7 3.8 0.00013 36.3 5.8 62 494-557 20-90 (160)
267 1w4v_A Thioredoxin, mitochondr 76.6 4.5 0.00016 34.7 6.1 46 504-549 29-75 (119)
268 2xhf_A Peroxiredoxin 5; oxidor 76.4 9.3 0.00032 36.6 8.8 62 337-410 32-98 (171)
269 1fb6_A Thioredoxin M; electron 76.1 5.3 0.00018 32.6 6.1 46 505-550 17-63 (105)
270 3f3q_A Thioredoxin-1; His TAG, 76.0 4.7 0.00016 34.1 6.0 47 502-549 20-67 (109)
271 1lu4_A Soluble secreted antige 75.9 4.7 0.00016 34.4 6.0 52 505-557 23-75 (136)
272 3cmi_A Peroxiredoxin HYR1; thi 75.5 2.8 9.7E-05 38.3 4.8 64 463-546 6-73 (171)
273 3h93_A Thiol:disulfide interch 75.5 27 0.00092 32.4 11.6 42 345-391 24-65 (192)
274 2djk_A PDI, protein disulfide- 75.4 4.3 0.00015 36.1 5.8 68 346-454 23-93 (133)
275 2hze_A Glutaredoxin-1; thiored 75.2 2 6.8E-05 37.5 3.5 25 427-454 62-86 (114)
276 3kij_A Probable glutathione pe 75.2 3.6 0.00012 38.1 5.4 50 505-556 37-97 (180)
277 1syr_A Thioredoxin; SGPP, stru 74.9 4.5 0.00015 34.1 5.5 46 503-549 23-69 (112)
278 3kcm_A Thioredoxin family prot 74.6 7.4 0.00025 34.2 7.1 52 505-556 27-81 (154)
279 2l5l_A Thioredoxin; structural 74.3 5.7 0.00019 35.0 6.3 46 504-549 36-82 (136)
280 2lus_A Thioredoxion; CR-Trp16, 76.3 0.65 2.2E-05 40.5 0.0 48 505-554 24-78 (143)
281 3p2a_A Thioredoxin 2, putative 73.9 5.4 0.00018 35.5 6.1 50 502-551 51-101 (148)
282 2e0q_A Thioredoxin; electron t 73.9 5.4 0.00018 32.2 5.6 47 503-550 13-60 (104)
283 1xiy_A Peroxiredoxin, pfaop; a 73.5 4.6 0.00016 39.0 5.8 99 337-457 33-151 (182)
284 3hz4_A Thioredoxin; NYSGXRC, P 73.4 5.7 0.00019 35.2 6.1 48 503-550 21-69 (140)
285 2l57_A Uncharacterized protein 73.4 4.6 0.00016 34.8 5.3 44 503-546 23-69 (126)
286 3gnj_A Thioredoxin domain prot 73.1 6.5 0.00022 32.5 6.0 46 504-549 20-66 (111)
287 3hxs_A Thioredoxin, TRXP; elec 72.3 5.7 0.00019 34.8 5.7 46 505-550 50-96 (141)
288 2b1k_A Thiol:disulfide interch 72.2 4.7 0.00016 36.3 5.3 50 504-556 49-99 (168)
289 2o8v_B Thioredoxin 1; disulfid 71.9 5.3 0.00018 35.1 5.4 45 504-548 38-83 (128)
290 3kh7_A Thiol:disulfide interch 71.8 3.1 0.00011 38.5 4.1 50 505-557 57-107 (176)
291 3aps_A DNAJ homolog subfamily 71.6 7.3 0.00025 33.0 6.1 47 504-550 19-66 (122)
292 2lja_A Putative thiol-disulfid 71.6 3.4 0.00012 36.3 4.2 52 505-556 29-82 (152)
293 3eyt_A Uncharacterized protein 71.4 10 0.00035 33.5 7.3 59 497-557 21-88 (158)
294 2p5q_A Glutathione peroxidase 71.3 4.4 0.00015 36.3 4.9 40 505-546 31-74 (170)
295 2vup_A Glutathione peroxidase- 71.0 4.6 0.00016 37.8 5.1 46 498-547 42-91 (190)
296 1ti3_A Thioredoxin H, PTTRXH1; 70.6 9.9 0.00034 31.5 6.6 45 505-550 25-70 (113)
297 2b5x_A YKUV protein, TRXY; thi 70.6 7.8 0.00027 33.4 6.2 43 505-547 28-71 (148)
298 2voc_A Thioredoxin; electron t 70.4 4.8 0.00016 34.1 4.7 44 505-548 16-60 (112)
299 4euy_A Uncharacterized protein 70.4 6.6 0.00023 32.7 5.5 46 502-548 14-60 (105)
300 3fk8_A Disulphide isomerase; A 70.1 2.9 9.9E-05 36.4 3.3 43 504-546 27-72 (133)
301 1ep7_A Thioredoxin CH1, H-type 70.0 6.6 0.00022 32.6 5.4 45 506-550 24-69 (112)
302 2vim_A Thioredoxin, TRX; thior 68.8 8.8 0.0003 31.2 5.8 44 505-549 18-62 (104)
303 2p31_A CL683, glutathione pero 68.8 5.2 0.00018 37.1 4.9 41 505-547 48-92 (181)
304 2oe3_A Thioredoxin-3; electron 67.7 6.7 0.00023 33.7 5.1 47 503-550 27-74 (114)
305 1kng_A Thiol:disulfide interch 67.2 7.1 0.00024 34.3 5.2 51 505-557 41-92 (156)
306 1zma_A Bacterocin transport ac 67.2 8.8 0.0003 32.6 5.7 43 503-547 26-69 (118)
307 1jfu_A Thiol:disulfide interch 67.0 11 0.00039 34.4 6.8 52 505-556 59-113 (186)
308 1x5d_A Protein disulfide-isome 66.9 8.1 0.00028 33.1 5.5 45 504-548 23-72 (133)
309 3dwv_A Glutathione peroxidase- 66.6 3.3 0.00011 38.7 3.1 46 497-546 39-88 (187)
310 2vlu_A Thioredoxin, thioredoxi 66.4 9.1 0.00031 32.4 5.6 44 505-549 33-77 (122)
311 3m9j_A Thioredoxin; oxidoreduc 66.4 10 0.00036 30.9 5.8 45 505-550 19-64 (105)
312 3lwa_A Secreted thiol-disulfid 66.2 8.1 0.00028 35.4 5.6 54 505-558 58-120 (183)
313 1xfl_A Thioredoxin H1; AT3G510 66.0 13 0.00044 32.3 6.6 44 505-549 37-81 (124)
314 2dj1_A Protein disulfide-isome 65.1 7.9 0.00027 33.7 5.1 48 501-548 29-80 (140)
315 1kte_A Thioltransferase; redox 64.8 12 0.00041 31.3 6.0 68 349-455 13-80 (105)
316 1hyu_A AHPF, alkyl hydroperoxi 64.4 8.7 0.0003 42.2 6.3 70 343-456 114-183 (521)
317 2ggt_A SCO1 protein homolog, m 64.1 5.7 0.00019 35.3 4.0 42 505-548 22-72 (164)
318 1z6n_A Hypothetical protein PA 63.9 4.4 0.00015 38.3 3.4 49 505-554 53-102 (167)
319 2f51_A Thioredoxin; electron t 62.4 12 0.00042 32.1 5.8 44 504-548 21-65 (118)
320 3gix_A Thioredoxin-like protei 61.9 8.2 0.00028 35.1 4.7 45 504-548 21-66 (149)
321 1gh2_A Thioredoxin-like protei 61.7 13 0.00046 30.7 5.7 45 504-549 19-64 (107)
322 3qfa_C Thioredoxin; protein-pr 61.7 11 0.00036 32.3 5.2 45 505-550 30-75 (116)
323 1qgv_A Spliceosomal protein U5 60.3 13 0.00045 33.4 5.8 43 505-547 22-65 (142)
324 2vm1_A Thioredoxin, thioredoxi 60.3 14 0.00049 30.7 5.7 44 505-549 27-71 (118)
325 2j23_A Thioredoxin; immune pro 60.2 5.4 0.00018 34.4 3.0 47 503-549 30-78 (121)
326 2dml_A Protein disulfide-isome 60.1 6.4 0.00022 33.8 3.5 47 504-550 33-80 (130)
327 1ego_A Glutaredoxin; electron 59.9 5.9 0.0002 31.6 3.0 64 350-455 3-70 (85)
328 2ls5_A Uncharacterized protein 63.4 2 6.8E-05 38.4 0.0 48 505-554 32-85 (159)
329 3t58_A Sulfhydryl oxidase 1; o 58.8 7 0.00024 43.6 4.4 64 404-472 173-240 (519)
330 2l5o_A Putative thioredoxin; s 58.8 13 0.00043 32.6 5.3 51 505-555 27-80 (153)
331 2ppt_A Thioredoxin-2; thiredox 58.5 16 0.00054 33.3 6.0 46 503-548 61-107 (155)
332 2cq9_A GLRX2 protein, glutared 58.0 27 0.00091 31.2 7.3 25 428-455 68-92 (130)
333 2obi_A PHGPX, GPX-4, phospholi 57.9 11 0.00038 34.7 4.9 40 505-546 46-89 (183)
334 2v1m_A Glutathione peroxidase; 57.7 11 0.00036 33.7 4.6 46 498-547 25-74 (169)
335 2rli_A SCO2 protein homolog, m 56.3 13 0.00044 33.3 5.0 43 505-547 25-74 (171)
336 2ju5_A Thioredoxin disulfide i 56.3 9.1 0.00031 34.7 4.0 44 504-547 45-93 (154)
337 3drn_A Peroxiredoxin, bacterio 56.3 10 0.00035 34.2 4.3 51 505-556 27-81 (161)
338 2qc7_A ERP31, ERP28, endoplasm 55.5 18 0.00061 36.4 6.3 21 431-452 72-94 (240)
339 3d6i_A Monothiol glutaredoxin- 55.4 11 0.00038 31.3 4.1 45 505-549 20-66 (112)
340 2ht9_A Glutaredoxin-2; thiored 54.7 12 0.00042 34.5 4.6 26 427-455 89-114 (146)
341 3c1r_A Glutaredoxin-1; oxidize 54.5 11 0.00036 33.3 4.0 67 350-454 27-93 (118)
342 3hdc_A Thioredoxin family prot 54.1 13 0.00044 33.2 4.5 43 505-547 40-84 (158)
343 2xc2_A Thioredoxinn; oxidoredu 54.0 16 0.00056 30.7 5.0 43 505-549 32-75 (117)
344 3d22_A TRXH4, thioredoxin H-ty 53.9 20 0.00068 31.2 5.7 44 505-549 45-89 (139)
345 3dxb_A Thioredoxin N-terminall 53.9 17 0.00059 34.9 5.7 48 503-550 27-75 (222)
346 2cvb_A Probable thiol-disulfid 53.3 11 0.00037 34.7 4.0 41 505-547 32-75 (188)
347 1r26_A Thioredoxin; redox-acti 53.0 16 0.00055 32.0 4.9 46 503-549 34-80 (125)
348 3gv1_A Disulfide interchange p 52.8 1.2E+02 0.004 27.9 11.0 95 344-453 12-120 (147)
349 1z6m_A Conserved hypothetical 52.1 21 0.00073 32.5 5.8 45 342-391 23-69 (175)
350 1v98_A Thioredoxin; oxidoreduc 52.0 33 0.0011 29.9 6.9 44 505-549 50-94 (140)
351 3u5r_E Uncharacterized protein 52.0 10 0.00034 36.6 3.7 40 505-546 57-101 (218)
352 2dj3_A Protein disulfide-isome 51.5 24 0.00082 30.2 5.8 42 505-546 24-68 (133)
353 2bmx_A Alkyl hydroperoxidase C 51.0 19 0.00067 33.6 5.5 48 505-555 44-96 (195)
354 2djj_A PDI, protein disulfide- 50.8 18 0.00061 30.4 4.7 43 504-546 23-71 (121)
355 1h75_A Glutaredoxin-like prote 50.5 39 0.0014 26.5 6.5 14 350-363 3-16 (81)
356 2fwh_A Thiol:disulfide interch 50.0 24 0.00082 30.8 5.6 43 505-548 30-76 (134)
357 2pu9_C TRX-F, thioredoxin F-ty 49.6 30 0.001 28.7 5.9 41 505-546 23-64 (111)
358 2l6c_A Thioredoxin; oxidoreduc 49.4 16 0.00054 30.8 4.2 44 503-547 16-60 (110)
359 3hd5_A Thiol:disulfide interch 49.2 25 0.00086 32.7 5.9 43 344-391 23-65 (195)
360 3zzx_A Thioredoxin; oxidoreduc 48.9 41 0.0014 28.8 6.8 44 505-549 19-63 (105)
361 2k6v_A Putative cytochrome C o 47.6 12 0.00042 33.3 3.4 41 505-547 34-82 (172)
362 1wou_A Thioredoxin -related pr 47.5 29 0.00099 29.9 5.6 42 505-546 23-72 (123)
363 2jsy_A Probable thiol peroxida 47.4 14 0.00049 33.2 3.8 43 505-548 43-87 (167)
364 1xzo_A BSSCO, hypothetical pro 47.3 7.2 0.00025 35.1 1.7 50 505-556 32-91 (174)
365 1r7h_A NRDH-redoxin; thioredox 46.7 65 0.0022 24.6 7.1 14 350-363 3-16 (75)
366 3uvt_A Thioredoxin domain-cont 46.4 35 0.0012 27.9 5.7 45 506-550 21-69 (111)
367 2yj7_A LPBCA thioredoxin; oxid 52.1 4.2 0.00014 33.0 0.0 44 504-547 17-61 (106)
368 3ia1_A THIO-disulfide isomeras 46.3 27 0.00092 30.5 5.3 47 507-555 31-80 (154)
369 1xvw_A Hypothetical protein RV 46.0 15 0.00053 32.6 3.7 51 505-556 34-88 (160)
370 2gs3_A PHGPX, GPX-4, phospholi 45.7 23 0.00078 32.8 5.0 40 505-546 48-91 (185)
371 3me7_A Putative uncharacterize 44.6 14 0.00048 34.0 3.3 45 499-547 23-74 (170)
372 1faa_A Thioredoxin F; electron 44.5 38 0.0013 28.6 5.9 41 505-546 36-77 (124)
373 2h30_A Thioredoxin, peptide me 44.2 20 0.00069 31.6 4.2 43 504-546 36-80 (164)
374 4hde_A SCO1/SENC family lipopr 43.9 22 0.00075 32.9 4.5 45 505-549 31-80 (170)
375 2lst_A Thioredoxin; structural 49.9 4.8 0.00017 34.7 0.0 44 503-546 16-63 (130)
376 3ztl_A Thioredoxin peroxidase; 43.6 34 0.0012 33.0 6.0 53 505-558 68-123 (222)
377 2dj0_A Thioredoxin-related tra 43.4 16 0.00054 32.0 3.3 43 505-549 25-71 (137)
378 3ixr_A Bacterioferritin comigr 43.2 41 0.0014 31.1 6.3 50 498-549 45-97 (179)
379 1qmv_A Human thioredoxin perox 42.8 24 0.00081 33.0 4.6 52 505-557 33-87 (197)
380 3f9u_A Putative exported cytoc 42.8 12 0.00043 33.9 2.6 45 504-548 45-93 (172)
381 3h79_A Thioredoxin-like protei 42.3 38 0.0013 29.0 5.6 45 505-549 32-82 (127)
382 1x5e_A Thioredoxin domain cont 41.7 45 0.0015 28.4 5.9 44 505-549 22-67 (126)
383 2rem_A Disulfide oxidoreductas 41.3 27 0.00093 32.2 4.7 41 344-391 23-65 (193)
384 1zof_A Alkyl hydroperoxide-red 41.3 13 0.00045 34.7 2.6 52 505-559 32-88 (198)
385 2wz9_A Glutaredoxin-3; protein 41.0 43 0.0015 30.0 5.9 43 506-549 32-75 (153)
386 2dlx_A UBX domain-containing p 40.9 18 0.00061 33.9 3.4 44 504-547 40-87 (153)
387 1we0_A Alkyl hydroperoxide red 40.8 17 0.0006 33.5 3.3 42 505-548 30-76 (187)
388 2c0g_A ERP29 homolog, windbeut 40.5 40 0.0014 34.1 6.1 21 431-453 84-106 (248)
389 3apq_A DNAJ homolog subfamily 40.4 40 0.0014 31.8 5.9 48 503-550 111-159 (210)
390 3na7_A HP0958; flagellar bioge 39.7 8.6 0.00029 38.9 1.1 8 686-693 223-230 (256)
391 1uul_A Tryparedoxin peroxidase 39.7 28 0.00094 32.8 4.6 51 505-556 35-88 (202)
392 2f8a_A Glutathione peroxidase 38.8 35 0.0012 32.7 5.3 40 505-546 46-89 (208)
393 2hyx_A Protein DIPZ; thioredox 38.6 37 0.0013 36.0 5.8 40 505-546 81-124 (352)
394 2c0d_A Thioredoxin peroxidase 38.6 23 0.0008 34.5 4.0 51 505-558 55-110 (221)
395 2ywi_A Hypothetical conserved 38.6 23 0.00079 32.5 3.8 43 505-547 44-89 (196)
396 3gkn_A Bacterioferritin comigr 38.4 49 0.0017 29.4 5.8 55 499-556 30-87 (163)
397 2pn8_A Peroxiredoxin-4; thiore 37.8 31 0.001 33.2 4.6 52 505-559 47-103 (211)
398 3msz_A Glutaredoxin 1; alpha-b 37.3 53 0.0018 26.1 5.3 33 350-391 6-38 (89)
399 1nho_A Probable thioredoxin; b 37.2 26 0.00087 27.4 3.3 40 510-549 5-45 (85)
400 3h5i_A Response regulator/sens 37.2 1.5E+02 0.0051 25.2 8.6 79 383-478 29-115 (140)
401 3qou_A Protein YBBN; thioredox 36.4 19 0.00065 35.5 3.0 44 505-550 25-71 (287)
402 2h01_A 2-Cys peroxiredoxin; th 36.2 20 0.00067 33.4 2.9 50 505-557 30-84 (192)
403 1mek_A Protein disulfide isome 35.4 10 0.00034 31.5 0.7 44 503-546 21-68 (120)
404 1wmj_A Thioredoxin H-type; str 35.4 11 0.00037 32.2 0.9 44 505-549 35-79 (130)
405 2i81_A 2-Cys peroxiredoxin; st 35.2 32 0.0011 33.1 4.3 52 505-557 51-105 (213)
406 2b7k_A SCO1 protein; metalloch 34.5 40 0.0014 31.7 4.8 41 505-547 40-88 (200)
407 1xvq_A Thiol peroxidase; thior 34.5 24 0.00081 32.5 3.1 41 505-549 43-87 (175)
408 3ira_A Conserved protein; meth 34.4 19 0.00066 34.4 2.5 44 503-546 36-83 (173)
409 2klx_A Glutaredoxin; thioredox 34.4 1.5E+02 0.0052 23.7 7.8 22 431-455 45-67 (89)
410 2dbc_A PDCL2, unnamed protein 34.0 48 0.0016 29.2 5.0 41 505-546 29-70 (135)
411 2znm_A Thiol:disulfide interch 33.6 43 0.0015 30.9 4.8 40 345-391 21-62 (195)
412 1q98_A Thiol peroxidase, TPX; 33.0 33 0.0011 31.0 3.8 46 499-549 38-87 (165)
413 3zrd_A Thiol peroxidase; oxido 33.0 28 0.00095 33.2 3.4 48 498-548 72-121 (200)
414 1wjk_A C330018D20RIK protein; 32.9 46 0.0016 28.2 4.5 19 345-363 14-32 (100)
415 3cxg_A Putative thioredoxin; m 32.9 34 0.0012 30.0 3.7 41 505-547 39-80 (133)
416 1mb3_A Cell division response 32.8 2E+02 0.0068 23.4 8.4 49 426-478 61-112 (124)
417 1sen_A Thioredoxin-like protei 32.7 10 0.00034 35.0 0.2 45 503-547 43-88 (164)
418 1zye_A Thioredoxin-dependent p 32.0 40 0.0014 32.5 4.4 49 505-556 55-108 (220)
419 1oaz_A Thioredoxin 1; immune s 31.9 10 0.00035 33.1 0.2 46 503-548 18-78 (123)
420 1fo5_A Thioredoxin; disulfide 31.3 25 0.00084 27.5 2.3 40 509-548 5-45 (85)
421 2jrp_A Putative cytoplasmic pr 31.1 16 0.00055 31.6 1.2 23 681-703 27-54 (81)
422 2fgx_A Putative thioredoxin; N 31.0 40 0.0014 29.8 3.9 22 348-369 30-53 (107)
423 3rhb_A ATGRXC5, glutaredoxin-C 31.0 1.1E+02 0.0039 25.8 6.7 64 350-454 21-84 (113)
424 2kuc_A Putative disulphide-iso 29.8 40 0.0014 28.7 3.6 43 504-546 25-71 (130)
425 3mhs_C SAGA-associated factor 29.2 49 0.0017 29.6 4.0 16 681-696 66-81 (99)
426 3kp9_A Vkorc1/thioredoxin doma 28.6 9.5 0.00032 39.7 -0.8 36 337-374 188-223 (291)
427 2jne_A Hypothetical protein YF 27.8 26 0.00088 31.5 2.0 23 681-703 57-84 (101)
428 2yan_A Glutaredoxin-3; oxidore 27.6 41 0.0014 28.5 3.2 25 428-455 60-84 (105)
429 3hz8_A Thiol:disulfide interch 27.0 92 0.0032 29.3 5.9 42 345-391 23-64 (193)
430 2av4_A Thioredoxin-like protei 26.7 65 0.0022 31.0 4.7 43 505-547 40-83 (160)
431 3pwf_A Rubrerythrin; non heme 26.6 32 0.0011 33.0 2.6 56 628-701 114-169 (170)
432 3ed3_A Protein disulfide-isome 26.1 50 0.0017 33.6 4.1 43 504-546 33-76 (298)
433 1xg8_A Hypothetical protein SA 25.8 71 0.0024 29.1 4.5 46 517-568 32-82 (111)
434 2qsi_A Putative hydrogenase ex 25.4 39 0.0013 31.4 2.9 48 501-550 27-80 (137)
435 2yzh_A Probable thiol peroxida 25.4 75 0.0026 28.7 4.8 49 505-555 46-96 (171)
436 1psq_A Probable thiol peroxida 24.9 83 0.0028 28.2 5.0 52 499-554 37-90 (163)
437 3nzn_A Glutaredoxin; structura 24.7 57 0.0019 27.5 3.6 31 350-389 24-54 (103)
438 3ic4_A Glutaredoxin (GRX-1); s 24.5 54 0.0018 26.5 3.3 23 429-454 56-78 (92)
439 2khp_A Glutaredoxin; thioredox 22.8 56 0.0019 26.4 3.1 24 429-455 45-68 (92)
440 1wgm_A Ubiquitin conjugation f 22.8 36 0.0012 29.5 2.0 27 679-705 16-43 (98)
441 3hd5_A Thiol:disulfide interch 22.4 3.3E+02 0.011 25.0 8.7 42 505-546 24-66 (195)
442 3p7x_A Probable thiol peroxida 22.3 75 0.0026 28.6 4.1 52 499-555 41-94 (166)
443 1k68_A Phytochrome response re 21.9 3.3E+02 0.011 22.3 11.2 50 426-479 71-123 (140)
No 1
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.44 E-value=7.4e-13 Score=124.30 Aligned_cols=125 Identities=20% Similarity=0.330 Sum_probs=105.0
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+| .|.++.++||.|+|+|.+.||++|.. +.|.++|+++++ ..+++||.|++ |.+.+.+..+.
T Consensus 36 ~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~-----~~~v~vv~v~~--------d~~~~~~~~~~ 101 (165)
T 3s9f_A 36 KQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHD-----SKNFEIILASW--------DEEEDDFNAYY 101 (165)
T ss_dssp ETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CCSHHHHHHHH
T ss_pred cCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhcc-----CCCeEEEEEec--------CCCHHHHHHHH
Confidence 3456 99999999999999999999988766 679999999962 34799999987 55667889999
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCC-CceecccHHHHHHHh-CcccccCCh
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQ-GRVVNQNALHMMWIW-GSVAFPFSV 474 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pq-Gkv~~~nA~~mI~~w-G~~AFPFT~ 474 (706)
..++|+.+|+.. ......+.+.|++.++|+++++|++ |+++..++.+.+..- ....||+..
T Consensus 102 ~~~~~~~~~~~~---~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 102 AKMPWLSIPFAN---RNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp TTCSSEECCTTC---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred HhCCCcccccCc---hhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHHhhCcccccCCCCC
Confidence 999999999965 3445788899999999999999998 999999998877554 456688864
No 2
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.43 E-value=1.3e-12 Score=117.94 Aligned_cols=125 Identities=17% Similarity=0.327 Sum_probs=105.8
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.++.++||.|+|+|.+.||++|.. +.|.++|++++. ..+++||.|++ |.+.+...++.
T Consensus 15 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~-----~~~~~vv~v~~--------d~~~~~~~~~~ 81 (144)
T 1i5g_A 15 KGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAE-----KKNFEVMLISW--------DESAEDFKDYY 81 (144)
T ss_dssp ETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CSSHHHHHHHH
T ss_pred cCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-----CCCEEEEEEeC--------CCCHHHHHHHH
Confidence 4578899999999999999999999998865 679999999862 25799999986 44667888899
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEEC-CCCceecccHHHHHHHhCc-ccccCC
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLD-PQGRVVNQNALHMMWIWGS-VAFPFS 473 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~-pqGkv~~~nA~~mI~~wG~-~AFPFT 473 (706)
..++|..+|+.. ......+.+.|++.++|+++++| ++|+++..++...+..-+. ..||++
T Consensus 82 ~~~~~~~~~~~~---~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (144)
T 1i5g_A 82 AKMPWLALPFED---RKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVKDPEAKDFPWP 143 (144)
T ss_dssp TTCSSEECCTTC---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HhCCccccccCc---hHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhhCcccccCCCC
Confidence 999999999863 34456788899999999999999 9999999999999988874 457764
No 3
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.41 E-value=2.8e-12 Score=115.08 Aligned_cols=124 Identities=19% Similarity=0.325 Sum_probs=103.8
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+| .+.+++++||.|+|+|.+.||++|.. +.|.++|++++ ...+++||.|++ |.+.+.+..+.
T Consensus 16 ~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~-----~~~~~~vv~i~~--------d~~~~~~~~~~ 81 (144)
T 1o73_A 16 SKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHH-----VAKNFEVVLISW--------DENESDFHDYY 81 (144)
T ss_dssp CTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHT-----TTTTEEEEEEEC--------CSSHHHHHHHH
T ss_pred cCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhc-----cCCCEEEEEEeC--------CCCHHHHHHHH
Confidence 4567 99999999999999999999998865 67999999986 235799999986 44667888999
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEEC-CCCceecccHHHHHHHhCc-ccccCC
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLD-PQGRVVNQNALHMMWIWGS-VAFPFS 473 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~-pqGkv~~~nA~~mI~~wG~-~AFPFT 473 (706)
..++|+.+|+.. ......+.+.|++.++|+++++| ++|+++...+...+..-+. ..||+.
T Consensus 82 ~~~~~~~~~~~~---~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~W~ 143 (144)
T 1o73_A 82 GKMPWLALPFDQ---RSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPWP 143 (144)
T ss_dssp TTCSSEECCTTC---HHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HhCCceEeeccc---hhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHHhhCCCccCCCCC
Confidence 999999999863 34456788899999999999999 8999999999998887764 446653
No 4
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.40 E-value=1.9e-12 Score=117.33 Aligned_cols=125 Identities=20% Similarity=0.295 Sum_probs=104.3
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+| .+.+++++||.|+|+|.+.||++|.. +.|.++|++++. ..+++||+|++ |.+.+.+.++.
T Consensus 16 ~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~-----~~~~~vv~v~~--------d~~~~~~~~~~ 81 (146)
T 1o8x_A 16 RGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHE-----SKNFEVVFCTW--------DEEEDGFAGYF 81 (146)
T ss_dssp ETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-----TTTEEEEEEEC--------CCSHHHHHHHH
T ss_pred cCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhh-----cCCeEEEEEeC--------CCCHHHHHHHH
Confidence 3467 99999999999999999999998865 679999999862 34799999986 45677889999
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEEC-CCCceecccHHHHHHHhCc-ccccCCh
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLD-PQGRVVNQNALHMMWIWGS-VAFPFSV 474 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~-pqGkv~~~nA~~mI~~wG~-~AFPFT~ 474 (706)
..++|+.+|+.. ......+.+.|++.++|+++++| ++|+++..++...+..-+. .+||+.+
T Consensus 82 ~~~~~~~~~~~~---~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~~~~~~~~~~~w~~ 144 (146)
T 1o8x_A 82 AKMPWLAVPFAQ---SEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWKD 144 (146)
T ss_dssp TTCSSEECCGGG---HHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHTTCTTCTTTTCCC
T ss_pred HHCCceeeccch---hhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHHhhCCccccCCCCC
Confidence 999999999852 24456788899999999999999 8999999999988776663 5677753
No 5
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.65 E-value=1.3e-11 Score=110.02 Aligned_cols=115 Identities=16% Similarity=0.237 Sum_probs=90.2
Q ss_pred CCCceeecce-ecCc-EEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 334 PTKRKVSIDV-LRRK-SVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 334 ~~~~kV~Is~-L~gK-~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
.+|..+.+++ ++|| .|+|+|.+.||++|.. +.|.++|+++++ .+.+++||.|++ |.+.+...++
T Consensus 12 ~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~----~~~~~~v~~v~~--------d~~~~~~~~~ 79 (143)
T 2lus_A 12 KNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVD----DSAPFEIIFVSS--------DRSEDDMFQY 79 (143)
Confidence 4677899999 9999 9999999999998854 679999999863 245799999986 3333444444
Q ss_pred hcC--CCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecccHHHHHHH
Q 005245 410 QYM--MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWI 464 (706)
Q Consensus 410 ~~~--MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~ 464 (706)
... .+|..+|+.+ ...+.+.+.|++.+.|+++++|++|+++..++..-+..
T Consensus 80 ~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~ 132 (143)
T 2lus_A 80 MMESHGDWLAIPYRS----GPASNVTAKYGITGIPALVIVKKDGTLISMNGRGEVQS 132 (143)
Confidence 444 4899888854 34456778899999999999999999999888776553
No 6
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.03 E-value=6.6e-10 Score=102.25 Aligned_cols=107 Identities=13% Similarity=0.270 Sum_probs=84.6
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.+++++||.|+|+|.+.||++|.. +.|.++|+++++ .+++||.|++ |..++....+.
T Consensus 22 ~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~------~~~~vv~i~~--------d~~~~~~~~~~ 87 (152)
T 2lrt_A 22 DLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYAS------QGFEIYQISL--------DGDEHFWKTSA 87 (152)
T ss_dssp BTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEC--------SCCHHHHHHHH
T ss_pred cCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhcc------CCeEEEEEEc--------cCCHHHHHHHH
Confidence 4578899999999999999999999998864 789999999973 2599999986 33345556666
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceeccc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 457 (706)
..+||..+.-++ .....+.+.|++.+.|+.+++|++|+++...
T Consensus 88 ~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 88 DNLPWVCVRDAN----GAYSSYISLYNVTNLPSVFLVNRNNELSARG 130 (152)
T ss_dssp TTCSSEEEECSS----GGGCHHHHHHTCCSCSEEEEEETTTEEEEET
T ss_pred hCCCceEEECCC----CcchHHHHHcCcccCceEEEECCCCeEEEec
Confidence 779988776543 2222456778999999999999999998753
No 7
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.02 E-value=4.1e-10 Score=101.40 Aligned_cols=106 Identities=13% Similarity=0.159 Sum_probs=82.6
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHH---HHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQ---MYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFE 407 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~---iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe 407 (706)
..+|+.+.++.++||.|+|+|-+.||++|.. +.|.+ +|++.+. .+++||.|+. |.+.+.+.
T Consensus 18 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~------~~~~vi~i~~--------d~~~~~~~ 83 (142)
T 3eur_A 18 LDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA------KKLKVLSIYP--------DEELDEWK 83 (142)
T ss_dssp ETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT------TSEEEEEEEC--------SSCHHHHH
T ss_pred cCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc------CCeEEEEEEc--------CCCHHHHH
Confidence 3578899999999999999999999988755 78999 9999972 4699999976 44445555
Q ss_pred HhhcCC--CceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceeccc
Q 005245 408 ALQYMM--PWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 408 ~~~~~M--PWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 457 (706)
.+...+ +|..+.- ......+.+.|++.++|+++++|++|+++..+
T Consensus 84 ~~~~~~~~~~~~~~d-----~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (142)
T 3eur_A 84 KHRNDFAKEWTNGYD-----KELVIKNKNLYDLRAIPTLYLLDKNKTVLLKD 130 (142)
T ss_dssp HHGGGSCTTSEEEEC-----TTCHHHHTTCSCCTTCSEEEEECTTCBEEEEE
T ss_pred HHHHhcccccccccC-----ccchhhhhhhcCCCcCCeEEEECCCCcEEecC
Confidence 555444 5655433 33334567889999999999999999999765
No 8
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.97 E-value=6.4e-10 Score=100.24 Aligned_cols=109 Identities=13% Similarity=0.057 Sum_probs=77.0
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.|+++.++||.|+|+|.+.||++|.. +.|.++|++.+ +.+++||.|++ |. +.++-++|-+ .
T Consensus 19 ~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~------~~~~~vv~vs~-d~----~~~~~~~~~~-~ 86 (143)
T 4fo5_A 19 LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFG------PDKIAMCSISM-DE----KESIFTETVK-I 86 (143)
T ss_dssp -----CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSC------TTTEEEEEEEC-CS----CHHHHHHHHH-H
T ss_pred cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC------cCCEEEEEEEc-cC----CHHHHHHHHH-H
Confidence 3678899999999999999999999988766 57999998875 23799999986 21 1222333332 2
Q ss_pred cCCCc-eeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceeccc
Q 005245 411 YMMPW-FSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 411 ~~MPW-yAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 457 (706)
..++| ..+..+. .....+.+.|++.++|+.+++|++|+++..+
T Consensus 87 ~~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 87 DKLDLSTQFHEGL----GKESELYKKYDLRKGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp HTCCGGGEEECTT----GGGSHHHHHTTGGGCCCEEEECTTSBEEEES
T ss_pred hCCCCceeeeccc----ccchHHHHHcCCCCCCcEEEECCCCEEEEcc
Confidence 46888 4443322 1234566778999999999999999998764
No 9
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.97 E-value=4.8e-09 Score=95.44 Aligned_cols=109 Identities=18% Similarity=0.185 Sum_probs=83.2
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.+++++||.|+|+|.+.||++|.. +.|.++|++.+ +.+++||.|++ |. +.+.-++|-.-
T Consensus 16 ~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~------~~~~~vv~v~~-d~----~~~~~~~~~~~- 83 (152)
T 2lrn_A 16 DLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFK------DKGFTIYGVST-DR----REEDWKKAIEE- 83 (152)
T ss_dssp CSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHT------TTTEEEEEEEC-CS----CHHHHHHHHHH-
T ss_pred cCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhc------cCCeEEEEEEc-cC----CHHHHHHHHHH-
Confidence 3567899999999999999999999999865 67999999986 23699999986 21 12333334332
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceeccc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 457 (706)
..+||..+.-+ ......+.+.|++.+.|+++++|++|+++...
T Consensus 84 ~~~~~~~~~d~----~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 84 DKSYWNQVLLQ----KDDVKDVLESYCIVGFPHIILVDPEGKIVAKE 126 (152)
T ss_dssp HTCCSEEEEEC----HHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC
T ss_pred hCCCCeEEecc----cchhHHHHHHhCCCcCCeEEEECCCCeEEEee
Confidence 36788766543 23356778889999999999999999998764
No 10
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.94 E-value=4.9e-09 Score=95.18 Aligned_cols=108 Identities=12% Similarity=0.261 Sum_probs=82.0
Q ss_pred CCCCceeecc--eecCcEEEEEEecCCCCh--hHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHH
Q 005245 333 CPTKRKVSID--VLRRKSVLLLVSDLDVSN--EEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKF 406 (706)
Q Consensus 333 g~~~~kV~Is--~L~gK~VlL~fSal~~~~--~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~F 406 (706)
..+|+.+.++ .++||.|+|+|-+.||++ |.. +.|.++|++.+ .+.+++||.|++ |.+.+..
T Consensus 18 ~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~-----~~~~~~~v~v~~--------d~~~~~~ 84 (150)
T 3fw2_A 18 NAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYK-----KNKYIGMLGISL--------DVDKQQW 84 (150)
T ss_dssp BTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHT-----TCSSEEEEEEEC--------CSCHHHH
T ss_pred CCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhc-----cCCCeEEEEEEc--------CCCHHHH
Confidence 4678899999 999999999999999988 765 68999999983 234699999986 2223333
Q ss_pred HHhh--cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceeccc
Q 005245 407 EALQ--YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 407 e~~~--~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 457 (706)
.++. ..+||..+.-+. .....+.+.|++.+.|+++++|++|+++...
T Consensus 85 ~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 85 KDAIKRDTLDWEQVCDFG----GLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp HHHHHHTTCCSEEECCSC----GGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred HHHHHHhCCCceEEEcCc----ccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 3332 356777665432 2234667788999999999999999998765
No 11
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.93 E-value=1.4e-09 Score=97.20 Aligned_cols=104 Identities=16% Similarity=0.224 Sum_probs=77.2
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHH---HHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQ---MYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFE 407 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~---iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe 407 (706)
..+|+.+.++.++||.|+|+|.+.||++|.. +.|.+ +|++.+. .+++||.|++ |.+.+...
T Consensus 14 ~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~------~~~~~v~v~~--------d~~~~~~~ 79 (142)
T 3ewl_A 14 TVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN------GTLRVLAIYP--------DENREEWA 79 (142)
T ss_dssp CTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH------TSEEEEEEEC--------SSCHHHHH
T ss_pred CCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc------CCeEEEEEEe--------cCCHHHHH
Confidence 4578899999999999999999999999866 56777 8998863 3599999986 33444455
Q ss_pred HhhcC--CCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 408 ALQYM--MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 408 ~~~~~--MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+... ++|..+.- ....-...+.|++.+.|+++++|++|+++.
T Consensus 80 ~~~~~~~~~~~~~~d-----~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 124 (142)
T 3ewl_A 80 TKAVYMPQGWIVGWN-----KAGDIRTRQLYDIRATPTIYLLDGRKRVIL 124 (142)
T ss_dssp HHHTTSCTTCEEEEC-----TTCHHHHTTCSCCCSSSEEEEECTTCBEEE
T ss_pred HHHHHcCCCcceeeC-----CccchhhHHHcCCCCCCeEEEECCCCCEEe
Confidence 54444 45544433 222222245899999999999999999986
No 12
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.85 E-value=3.8e-08 Score=89.74 Aligned_cols=114 Identities=11% Similarity=0.098 Sum_probs=86.0
Q ss_pred CCCceeecceecCcEEEEEEecCCCCh-hHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 334 PTKRKVSIDVLRRKSVLLLVSDLDVSN-EEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 334 ~~~~kV~Is~L~gK~VlL~fSal~~~~-~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
.+|+.+.+++++||.|+|+|.+.||++ |.. +.|.++|+++++.+ ...+++||+|++ |... -+.+.-++|-+-+
T Consensus 11 ~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~--~~~~~~vv~vs~-d~~~-d~~~~~~~~~~~~ 86 (164)
T 2ggt_A 11 HTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSIT--TLPDLTPLFISI-DPER-DTKEAIANYVKEF 86 (164)
T ss_dssp TTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSS--SSCCEEEEEEES-CTTT-CCHHHHHHHHHTT
T ss_pred CCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhcc--CCCcEEEEEEEe-CCCC-CCHHHHHHHHHHc
Confidence 568899999999999999999999997 755 78999999997421 124899999987 4210 0123345565433
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCc---------------EEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKP---------------ILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP---------------~LVvL~pqGkv~~~ 456 (706)
.++|..+.- +....+.+.+.|++...| ..+++|++|+++..
T Consensus 87 -~~~~~~l~~----~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 142 (164)
T 2ggt_A 87 -SPKLVGLTG----TREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDY 142 (164)
T ss_dssp -CSSCEEEEC----CHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEE
T ss_pred -CCCeEEEeC----CHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEE
Confidence 468877754 345666788899999999 89999999999864
No 13
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.83 E-value=1.5e-08 Score=92.08 Aligned_cols=105 Identities=12% Similarity=0.092 Sum_probs=80.3
Q ss_pred CCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhc
Q 005245 334 PTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 411 (706)
Q Consensus 334 ~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~ 411 (706)
.+|+.+.+++++||.|+|+|.+.||++|.. +.|.++|++++ +.+++||.|++ | +.++-..|-.- .
T Consensus 12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~------~~~v~vv~v~~-d-----~~~~~~~~~~~-~ 78 (151)
T 3raz_A 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQK------KGSVDMVGIAL-D-----TSDNIGNFLKQ-T 78 (151)
T ss_dssp TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSC------TTTEEEEEEES-S-----CHHHHHHHHHH-S
T ss_pred cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhc------cCCeEEEEEEC-C-----ChHHHHHHHHH-c
Confidence 578899999999999999999999988765 67999998884 35699999987 3 24455555433 3
Q ss_pred CCCceeeccCCCCCHHHHHHHHHhhC--CCCCcEEEEECCCCceec
Q 005245 412 MMPWFSVHHPSAIDPAVIRYAKEKWD--FRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 412 ~MPWyAVpf~~~id~~~~r~ike~~~--~~~iP~LVvL~pqGkv~~ 455 (706)
.++|..+.... ...+.+.+.|+ +.++|+.+++|++|+++.
T Consensus 79 ~~~~~~~~~~~----~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 120 (151)
T 3raz_A 79 PVSYPIWRYTG----ANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQ 120 (151)
T ss_dssp CCSSCEEEECC----SCHHHHHHTTTCCSCCSSEEEEEETTTTEEE
T ss_pred CCCCceEecCc----cchHHHHHHhCCccCCCCEEEEECCCCcEEE
Confidence 45555554432 23456677889 999999999999999865
No 14
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.82 E-value=1.5e-08 Score=90.23 Aligned_cols=110 Identities=13% Similarity=0.210 Sum_probs=80.6
Q ss_pred CCCCceeecc--eecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHH
Q 005245 333 CPTKRKVSID--VLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 408 (706)
Q Consensus 333 g~~~~kV~Is--~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~ 408 (706)
..+|+.+.++ .++||.|+|+|.+.||++|.. +.|.+++++.+ .+.+++||.|++ |. +.++-++|-.
T Consensus 18 ~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~-----~~~~~~~v~v~~-d~----~~~~~~~~~~ 87 (148)
T 3fkf_A 18 NEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYK-----KNKNFAMLGISL-DI----DREAWETAIK 87 (148)
T ss_dssp BTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTT-----TCTTEEEEEEEC-CS----CHHHHHHHHH
T ss_pred CCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhc-----CCCCeEEEEEEC-CC----CHHHHHHHHH
Confidence 4578899999 999999999999999888765 67999998873 234699999986 21 1223333332
Q ss_pred hhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceeccc
Q 005245 409 LQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 409 ~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 457 (706)
...++|..+..+. .....+.+.|++.+.|+++++|++|+++...
T Consensus 88 -~~~~~~~~~~d~~----~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (148)
T 3fkf_A 88 -KDTLSWDQVCDFT----GLSSETAKQYAILTLPTNILLSPTGKILARD 131 (148)
T ss_dssp -HTTCCSEEECCSC----GGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred -HcCCCceEEEccC----CcchHHHHhcCCCCcCEEEEECCCCeEEEec
Confidence 2456777665432 1134667788999999999999999998664
No 15
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.79 E-value=1.3e-08 Score=91.66 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=75.8
Q ss_pred CCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcC
Q 005245 335 TKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYM 412 (706)
Q Consensus 335 ~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~ 412 (706)
+|..+.++.++||.|+|+|.+.||++|.. +.|.+++++++. .+++||.|++ |. +.++-..|-.- ..
T Consensus 17 ~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~-d~----~~~~~~~~~~~-~~ 84 (152)
T 3gl3_A 17 KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKA------KGFQVVAVNL-DA----KTGDAMKFLAQ-VP 84 (152)
T ss_dssp SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGG------GTEEEEEEEC-CS----SHHHHHHHHHH-SC
T ss_pred CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhc------CCeEEEEEEC-CC----CHHHHHHHHHH-cC
Confidence 77799999999999999999999999876 579999999863 2499999986 21 12333333322 22
Q ss_pred CCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 413 MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 413 MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
.+|..+.-++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 85 ~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (152)
T 3gl3_A 85 AEFTVAFDPK-------GQTPRLYGVKGMPTSFLIDRNGKVLLQ 121 (152)
T ss_dssp CCSEEEECTT-------CHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred CCCceeECCc-------chhHHHcCCCCCCeEEEECCCCCEEEE
Confidence 3444333322 246778899999999999999999864
No 16
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.76 E-value=2.5e-09 Score=95.27 Aligned_cols=107 Identities=18% Similarity=0.180 Sum_probs=77.6
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|..+.++.++||.|+|+|.+.||++|.. +.|.++|++.+. .+++||.|++-+ +.++-++|-.-+
T Consensus 18 ~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~d~-----~~~~~~~~~~~~ 86 (148)
T 3hcz_A 18 DTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRA------KGIQVYAANIER-----KDEEWLKFIRSK 86 (148)
T ss_dssp CTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGG------GTEEEEEEECCS-----SSHHHHHHHHHH
T ss_pred cCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc------CCEEEEEEEecC-----CHHHHHHHHHHc
Confidence 3568899999999999999999999888654 689999999973 259999998721 122334443322
Q ss_pred cCCC-ceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 411 YMMP-WFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MP-WyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
.++ |..+.-+ .....+.+.|++.+.|+++++|++|+++..
T Consensus 87 -~~~~~~~~~d~-----~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 127 (148)
T 3hcz_A 87 -KIGGWLNVRDS-----KNHTDFKITYDIYATPVLYVLDKNKVIIAK 127 (148)
T ss_dssp -TCTTSEEEECT-----TCCCCHHHHHCCCSSCEEEEECTTCBEEEE
T ss_pred -CCCCceEEecc-----ccchhHHHhcCcCCCCEEEEECCCCcEEEe
Confidence 344 4444332 222336677899999999999999999865
No 17
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.75 E-value=1.3e-07 Score=86.94 Aligned_cols=114 Identities=11% Similarity=0.073 Sum_probs=84.4
Q ss_pred CCCceeecceecCcEEEEEEecCCCCh-hHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 334 PTKRKVSIDVLRRKSVLLLVSDLDVSN-EEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 334 ~~~~kV~Is~L~gK~VlL~fSal~~~~-~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
.+|+.+.++.++||.|+|+|.+.||++ |.. +.|.++|+++++.+ ...+++||+|++ |... =+.+.-+.|-+-+
T Consensus 14 ~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~--~~~~v~vv~is~-d~~~-d~~~~~~~~~~~~ 89 (171)
T 2rli_A 14 HRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEP--GLPPVQPVFITV-DPER-DDVEAMARYVQDF 89 (171)
T ss_dssp TTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHST--TSCCEEEEEEES-CSTT-CCHHHHHHHHHTT
T ss_pred CCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhcc--CCCceEEEEEEE-CCCC-CCHHHHHHHHHHc
Confidence 568899999999999999999999987 754 78999999997421 235799999986 3210 0123444554433
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCc---------------EEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKP---------------ILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP---------------~LVvL~pqGkv~~~ 456 (706)
..+|..+.- +....+.+.+.|++...| +.+++|++|+++..
T Consensus 90 -~~~~~~l~~----~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~ 145 (171)
T 2rli_A 90 -HPRLLGLTG----STKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDY 145 (171)
T ss_dssp -CTTCCEEEC----CHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEE
T ss_pred -CCCeEEEeC----CHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEE
Confidence 467766654 235566778889999888 99999999999864
No 18
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.75 E-value=1.3e-08 Score=91.72 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=79.6
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.+++++||.|+|+|.+.||++|.. +.|.++|++.+ +.++.+|.|++ |. +++.-++|-.-
T Consensus 17 ~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~------~~~~~~v~v~~-d~----~~~~~~~~~~~- 84 (152)
T 2lja_A 17 DINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYA------GKDIHFVSLSC-DK----NKKAWENMVTK- 84 (152)
T ss_dssp ETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHST------TSSEEEEEEEC-CS----CHHHHHHHHHH-
T ss_pred cCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhc------cCCeEEEEEEc-cC----cHHHHHHHHHh-
Confidence 4678899999999999999999999998864 67888888874 34699999986 21 12233344322
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..++|+.+.... ...+.+.|++.+.|+++++|++|+++..
T Consensus 85 ~~~~~~~~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 124 (152)
T 2lja_A 85 DQLKGIQLHMGT------DRTFMDAYLINGIPRFILLDRDGKIISA 124 (152)
T ss_dssp HTCCSEEEECSS------CTHHHHHTTCCSSCCEEEECTTSCEEES
T ss_pred cCCCCceeecCc------chhHHHHcCcCCCCEEEEECCCCeEEEc
Confidence 367787666532 2345567899999999999999999874
No 19
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.71 E-value=2.2e-08 Score=90.60 Aligned_cols=105 Identities=16% Similarity=0.246 Sum_probs=76.8
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.++.++||.|+|+|.+.||++|.. +.|.+++++++. .+++||.|++-+ +.+.-+.|-.-+
T Consensus 13 ~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~v~~d~-----~~~~~~~~~~~~ 81 (151)
T 2f9s_A 13 DTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS------QGVEIVAVNVGE-----SKIAVHNFMKSY 81 (151)
T ss_dssp CTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEESC-----CHHHHHHHHHHH
T ss_pred cCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEECCC-----CHHHHHHHHHHc
Confidence 3467899999999999999999999988765 679999998862 369999998722 233344443322
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
.++|..+.-++ ..+.+.|++.+.|+++++|++|+++..
T Consensus 82 -~~~~~~~~d~~-------~~~~~~~~v~~~P~~~lid~~G~i~~~ 119 (151)
T 2f9s_A 82 -GVNFPVVLDTD-------RQVLDAYDVSPLPTTFLINPEGKVVKV 119 (151)
T ss_dssp -TCCSCEEEETT-------SHHHHHTTCCSSCEEEEECTTSEEEEE
T ss_pred -CCCceEEECCc-------hHHHHhcCCCCCCeEEEECCCCcEEEE
Confidence 34544332221 235667899999999999999999864
No 20
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.69 E-value=5.7e-08 Score=88.27 Aligned_cols=113 Identities=14% Similarity=0.167 Sum_probs=76.0
Q ss_pred CCceeecceecCcEEEEEEecCCCChhH---HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCC-CcChhhHHHHHHhh
Q 005245 335 TKRKVSIDVLRRKSVLLLVSDLDVSNEE---LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRST-PWTEAKEHKFEALQ 410 (706)
Q Consensus 335 ~~~kV~Is~L~gK~VlL~fSal~~~~~e---~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~-~w~D~de~~Fe~~~ 410 (706)
+|+.+.++.++||.|+|+|.+.||++|. ++.|.++|++++ +.+++||.|++-.... .=+.+.-++|-.-
T Consensus 17 ~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~------~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~- 89 (158)
T 3eyt_A 17 SATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFP------EDKVAVLGLHTVFEHHEAMTPISLKAFLHE- 89 (158)
T ss_dssp CSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSC------TTTEEEEEEECCCSCGGGSCHHHHHHHHHH-
T ss_pred CCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhC------cCCEEEEEEEecccccccCCHHHHHHHHHH-
Confidence 5789999999999999999999998874 578999999985 2469999998621000 0013333344321
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..++|..+--++ .......+.+.|++.+.|+++++|++|+++..
T Consensus 90 ~~~~~~~~~d~~--~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 133 (158)
T 3eyt_A 90 YRIKFPVGVDQP--GDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAH 133 (158)
T ss_dssp TTCCSCEEEECC--CSSSSCHHHHHTTCCSSSEEEEECTTSEEEEE
T ss_pred cCCCceEEEcCc--cchhhHHHHHHcCCCCCCEEEEECCCCCEEEE
Confidence 233443322222 11111246677899999999999999999864
No 21
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.68 E-value=3.8e-08 Score=85.38 Aligned_cols=110 Identities=16% Similarity=0.155 Sum_probs=76.7
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.++.++||.|+|+|.+.||++|.. +.|.+++++. +.++.+|.|...+.+ .+.+.+....+.
T Consensus 9 ~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~-------~~~~~~v~i~~~~~~---~~~~~~~~~~~~ 78 (138)
T 4evm_A 9 GVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEA-------GDDYVVLTVVSPGHK---GEQSEADFKNWY 78 (138)
T ss_dssp BTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTC-------TTTEEEEEEECTTST---TCCCHHHHHHHH
T ss_pred CCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHh-------CCCcEEEEEEcCCCC---chhhHHHHHHHH
Confidence 3467899999999999999999999988765 4577776663 346888887432211 244556666666
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
...++...|.- .|. ...+.+.|++.+.|+++++|++|+++..
T Consensus 79 ~~~~~~~~~~~--~d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 120 (138)
T 4evm_A 79 KGLDYKNLPVL--VDP--SGKLLETYGVRSYPTQAFIDKEGKLVKT 120 (138)
T ss_dssp TTCCCTTCCEE--ECT--TCHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred hhcCCCCeeEE--ECc--chHHHHHcCcccCCeEEEECCCCcEEEe
Confidence 66554222221 121 1246678899999999999999999753
No 22
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.67 E-value=1.2e-07 Score=89.29 Aligned_cols=115 Identities=14% Similarity=0.084 Sum_probs=81.9
Q ss_pred cCCCCceeecceecCcEEEEEEecCCCCh-h--HHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHH
Q 005245 332 ECPTKRKVSIDVLRRKSVLLLVSDLDVSN-E--ELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 408 (706)
Q Consensus 332 dg~~~~kV~Is~L~gK~VlL~fSal~~~~-~--e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~ 408 (706)
...+|+.|++++++||.|+|+|-+.||++ | +++.|.++|+++++ .+.+++||+|++ |+ .=+.+.-++|-+
T Consensus 14 ~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~----~~~~~~vv~is~-d~--~d~~~~~~~~~~ 86 (170)
T 3me7_A 14 VDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGT----PGKDFWVITFTF-DP--KDTLEDIKRFQK 86 (170)
T ss_dssp EETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCC----BTTTBEEEEEEC-CT--TCCHHHHHHHHH
T ss_pred EcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhh----cCCceEEEEEEC-CC--CCCHHHHHHHHH
Confidence 34678899999999999999999999963 4 56789999999962 356899999997 42 112344556654
Q ss_pred hhc-CC-CceeeccCCCCCHHHHHHHHHhhCC---------CCCcEEEEECCCCceecc
Q 005245 409 LQY-MM-PWFSVHHPSAIDPAVIRYAKEKWDF---------RKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 ~~~-~M-PWyAVpf~~~id~~~~r~ike~~~~---------~~iP~LVvL~pqGkv~~~ 456 (706)
-+. .. .|.-+--. +....+.+.+.|++ ...|.++++||+|+++..
T Consensus 87 ~~~~~~~~w~~l~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~ 142 (170)
T 3me7_A 87 EYGIDGKGWKVVKAK---TSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDY 142 (170)
T ss_dssp HTTCCSSSEEEEEES---SHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEE
T ss_pred HcCCCCCCeEEEeCC---CHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEE
Confidence 433 33 37433222 34556667777664 466899999999999853
No 23
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.66 E-value=2.6e-07 Score=84.61 Aligned_cols=118 Identities=18% Similarity=0.259 Sum_probs=78.9
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEeccc--CCCCcChhhHHHH--
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVD--RSTPWTEAKEHKF-- 406 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd--~s~~w~D~de~~F-- 406 (706)
..+|+.+.+++++||.|+|+|.+.||++|. ++.|.++|+++++ .+++||.|++-+ ...+++.++-++|
T Consensus 18 ~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~d~~~~~~~~~~~~~~~~~~ 91 (169)
T 2v1m_A 18 DINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVG------KGLRILAFPCNQFGGQEPWAEAEIKKFVT 91 (169)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred cCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhc------CCeEEEEEECCccCCCCCCCHHHHHHHHH
Confidence 457889999999999999999999999885 4789999999973 359999998621 0012344556667
Q ss_pred HHhhcCCCcee-eccCCCCCHHHHHHHHHh-hC-----CCCCcEEEEECCCCceecc
Q 005245 407 EALQYMMPWFS-VHHPSAIDPAVIRYAKEK-WD-----FRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 407 e~~~~~MPWyA-Vpf~~~id~~~~r~ike~-~~-----~~~iP~LVvL~pqGkv~~~ 456 (706)
+.+.-..|.++ +........+..+++++. ++ ++.+|..+++|++|+++..
T Consensus 92 ~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 148 (169)
T 2v1m_A 92 EKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKR 148 (169)
T ss_dssp HHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEE
T ss_pred HhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEE
Confidence 44444444332 111111111244555543 24 5567999999999999864
No 24
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.66 E-value=1.2e-07 Score=90.32 Aligned_cols=118 Identities=13% Similarity=0.179 Sum_probs=80.9
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEeccc--CCCCcChhhHHHHH-
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVD--RSTPWTEAKEHKFE- 407 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd--~s~~w~D~de~~Fe- 407 (706)
..+|+.+.+++++||.|+|+|.+.||++|. ++.|.++|+++++ .+++||.|++-+ .-...+.++-++|-
T Consensus 35 ~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~vs~d~~~~~~~~~~~~~~~~~~ 108 (190)
T 2vup_A 35 DADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKS------QGFTVLAFPCNQFGGQEPGNEEEIKEFVC 108 (190)
T ss_dssp BTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTCEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred cCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhc------CCeEEEEEEcCccCCCCCCCHHHHHHHHH
Confidence 356789999999999999999999998874 4789999999973 259999998721 00112344555564
Q ss_pred -HhhcCCCceee-ccCCCCCHHHHHHHH-HhhCCCCCc------EEEEECCCCceecc
Q 005245 408 -ALQYMMPWFSV-HHPSAIDPAVIRYAK-EKWDFRKKP------ILVVLDPQGRVVNQ 456 (706)
Q Consensus 408 -~~~~~MPWyAV-pf~~~id~~~~r~ik-e~~~~~~iP------~LVvL~pqGkv~~~ 456 (706)
.+.-..|+++- ........+..+++. +.+++.++| +.+++|++|+++..
T Consensus 109 ~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 166 (190)
T 2vup_A 109 TKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVER 166 (190)
T ss_dssp HHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEE
T ss_pred HhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEE
Confidence 44445555541 111111122445444 457888898 99999999999864
No 25
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.64 E-value=6.8e-08 Score=87.69 Aligned_cols=115 Identities=18% Similarity=0.159 Sum_probs=76.7
Q ss_pred CCCceeecceecCcEEEEEEecCCCChhH---HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCC-cChhhHHHHHHh
Q 005245 334 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE---LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTP-WTEAKEHKFEAL 409 (706)
Q Consensus 334 ~~~~kV~Is~L~gK~VlL~fSal~~~~~e---~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~-w~D~de~~Fe~~ 409 (706)
.+|+.+.++.++||.|+|+|.+.||++|. .+.|.++|++.+ +.+++||.|++-....+ -+.+.-++|-.-
T Consensus 18 ~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~------~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~ 91 (160)
T 3lor_A 18 VNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMID------ESQVQVIGLHSVFEHHDVMTPEALKVFIDE 91 (160)
T ss_dssp SSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSC------TTTEEEEEEECCCSCGGGSCHHHHHHHHHH
T ss_pred cCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhC------cCCcEEEEEeccccccccCCHHHHHHHHHH
Confidence 35689999999999999999999999875 468999999985 23599999986210000 023333444322
Q ss_pred hcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 410 QYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 ~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..++|-.+--+.. .....+.+.+.|++.++|+.+++|++|+++..
T Consensus 92 -~~~~~~~~~d~~~-~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 136 (160)
T 3lor_A 92 -FGIKFPVAVDMPR-EGQRIPSTMKKYRLEGTPSIILADRKGRIRQV 136 (160)
T ss_dssp -TTCCSCEEEECCC-TTCSSCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred -cCCCCcEEECCcc-ccchhhhHHHhcccCccceEEEECCCCcEEEE
Confidence 2334333322221 11112336677899999999999999999864
No 26
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.64 E-value=8.2e-08 Score=87.37 Aligned_cols=108 Identities=12% Similarity=0.073 Sum_probs=75.6
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.++.++||.|+|+|.+.||++|.. +.|.++|++.+ +.++++|.|++-+ +.+.-++|-.-
T Consensus 21 ~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~------~~~v~~v~v~~d~-----~~~~~~~~~~~- 88 (165)
T 3or5_A 21 TVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWA------SRGFTFVGIAVNE-----QLPNVKNYMKT- 88 (165)
T ss_dssp CTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHT------TTTEEEEEEECSC-----CHHHHHHHHHH-
T ss_pred CCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhc------cCCeEEEEEECCC-----CHHHHHHHHHH-
Confidence 3678899999999999999999999998776 57999999986 2358999998621 23333444332
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhh--CCCCCcEEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKW--DFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~--~~~~iP~LVvL~pqGkv~~~ 456 (706)
..++|..+.- +.+..+.+...+ ++.+.|+++++|++|+++..
T Consensus 89 ~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 132 (165)
T 3or5_A 89 QGIIYPVMMA----TPELIRAFNGYIDGGITGIPTSFVIDASGNVSGV 132 (165)
T ss_dssp HTCCSCEEEC----CHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEE
T ss_pred cCCCCceEec----CHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEE
Confidence 3456554443 123333322111 79999999999999999754
No 27
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.62 E-value=1.3e-07 Score=86.73 Aligned_cols=120 Identities=10% Similarity=0.043 Sum_probs=84.2
Q ss_pred cCCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 332 ECPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 332 dg~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
...+|+.+.++.++||.|+|+|.+.||++|.. +.|.++|++++ +.++.+|.|+. |.+.++|-.
T Consensus 27 ~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~------~~~~~~v~v~~--------d~~~~~~~~- 91 (158)
T 3hdc_A 27 PTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFP------KGDLVVLAVNV--------EKRFPEKYR- 91 (158)
T ss_dssp ECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSS------TTSEEEEEEEC--------SSSCCGGGG-
T ss_pred EcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcc------cCCeEEEEEeC--------CHHHHHHHH-
Confidence 34678899999999999999999999988765 67999999885 24688888875 222222322
Q ss_pred hcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec-------ccHHHHHHHhCcccccCC
Q 005245 410 QYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN-------QNALHMMWIWGSVAFPFS 473 (706)
Q Consensus 410 ~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~-------~nA~~mI~~wG~~AFPFT 473 (706)
...++|..+.-+ ...+.+.|++.+.|+++++|++|+++. .+.-+++..+...-|||.
T Consensus 92 ~~~~~~~~~~d~-------~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~~~ 155 (158)
T 3hdc_A 92 RAPVSFNFLSDA-------TGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGHHH 155 (158)
T ss_dssp GCCCSCEEEECT-------TSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC----
T ss_pred HcCCCceEEECc-------hHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccccc
Confidence 234555443322 124667889999999999999999874 455666676666666663
No 28
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.62 E-value=8.6e-08 Score=84.77 Aligned_cols=104 Identities=12% Similarity=0.134 Sum_probs=73.9
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|..+.++. +||.|+|+|.+.||++|.. +.|.++|++.+ ..++++|.|++-+. +.+.+....+.
T Consensus 22 ~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~------~~~~~~v~v~~d~~-----~~~~~~~~~~~ 89 (145)
T 3erw_A 22 TIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHP------SDSVKLVTVNLVNS-----EQNQQVVEDFI 89 (145)
T ss_dssp CTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCC------CSSEEEEEEECGGG-----SSCHHHHHHHH
T ss_pred cCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcC------CCCEEEEEEEccCC-----cCCHHHHHHHH
Confidence 45678999999 9999999999999988776 57888888874 34699999987221 11333333332
Q ss_pred c--CCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 411 Y--MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 411 ~--~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
. ..+|..+.-+ ...+.+.|++.+.|+++++|++|+++.
T Consensus 90 ~~~~~~~~~~~d~-------~~~~~~~~~v~~~P~~~lid~~G~i~~ 129 (145)
T 3erw_A 90 KANKLTFPIVLDS-------KGELMKEYHIITIPTSFLLNEKGEIEK 129 (145)
T ss_dssp HHTTCCSCEEECS-------SSHHHHHTTCCEESEEEEECTTCCEEE
T ss_pred HHcCCceeEEEcC-------chhHHHhcCcCccCeEEEEcCCCcEEE
Confidence 2 3343332221 124567789999999999999999875
No 29
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.60 E-value=2.7e-08 Score=90.69 Aligned_cols=111 Identities=12% Similarity=0.068 Sum_probs=80.5
Q ss_pred ccCCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHH
Q 005245 331 VECPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 408 (706)
Q Consensus 331 ~dg~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~ 408 (706)
+...+|+.+.++.++||.|+|+|.+.||++|.. +.|.++|++++. .+++||.|++-+.. .+...+.+..
T Consensus 23 l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~~~~~---~~~~~~~~~~ 93 (164)
T 2h30_A 23 MKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKF------SSANLITVASPGFL---HEKKDGEFQK 93 (164)
T ss_dssp CEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGG------TTSEEEEEECTTST---TCCCTTHHHH
T ss_pred cCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccc------CCcEEEEEEcCCCc---cccCHHHHHH
Confidence 334567789999999999999999999998865 679999888762 35999999862110 1223456666
Q ss_pred hhcCCCc--eeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 409 LQYMMPW--FSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 ~~~~MPW--yAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
+...+.| +.+-... ...+.+.|++.+.|+++++|++|+++..
T Consensus 94 ~~~~~~~~~~~~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 137 (164)
T 2h30_A 94 WYAGLNYPKLPVVTDN------GGTIAQNLNISVYPSWALIGKDGDVQRI 137 (164)
T ss_dssp HHTTSCCTTSCEEECT------TCHHHHHTTCCSSSEEEEECTTSCEEEE
T ss_pred HHHhCCCCcceEEEcC------chHHHHHcCCCccceEEEECCCCcEEEE
Confidence 6665444 4444322 2346677899999999999999998853
No 30
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.59 E-value=2.4e-07 Score=85.72 Aligned_cols=104 Identities=15% Similarity=0.233 Sum_probs=78.7
Q ss_pred CCCCceeecceecCcE-EEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHH
Q 005245 333 CPTKRKVSIDVLRRKS-VLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 408 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~-VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~ 408 (706)
..+|+.+.+++++||. |+|+|- +.||++|.. +.|.++|++++. .+++||.|+. | +.+.-++|-+
T Consensus 15 ~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~vs~-d-----~~~~~~~~~~ 82 (161)
T 3drn_A 15 ADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKD------YDVVVIGVSS-D-----DINSHKRFKE 82 (161)
T ss_dssp ETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHT------TCEEEEEEES-C-----CHHHHHHHHH
T ss_pred cCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEeC-C-----CHHHHHHHHH
Confidence 4578899999999998 999998 999988755 789999999973 3599999986 3 2445555544
Q ss_pred hhcCCCceeeccCCCCCHHHHHHHHHhhCCCC----CcEEEEECCCCceecc
Q 005245 409 LQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRK----KPILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 ~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~----iP~LVvL~pqGkv~~~ 456 (706)
-+ .+||..+.-++ ..+.+.|++.+ +|..+++|++|+++..
T Consensus 83 ~~-~~~~~~~~d~~-------~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~ 126 (161)
T 3drn_A 83 KY-KLPFILVSDPD-------KKIRELYGAKGFILPARITFVIDKKGIIRHI 126 (161)
T ss_dssp HT-TCCSEEEECTT-------SHHHHHTTCCCSSSCCCEEEEECTTSBEEEE
T ss_pred Hh-CCCceEEECCc-------HHHHHHcCCCCcCcccceEEEECCCCEEEEE
Confidence 32 45655443322 34567789999 9999999999999754
No 31
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.59 E-value=6.3e-08 Score=84.94 Aligned_cols=101 Identities=11% Similarity=0.068 Sum_probs=74.2
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|..+.++.++||.|+|+|.+.||++|.. +.|.+++++.+ +++++.|++-+ +.++-++|-.-
T Consensus 11 ~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~-----~~~~~~~~~~~- 76 (136)
T 1lu4_A 11 TLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--------AVTFVGIATRA-----DVGAMQSFVSK- 76 (136)
T ss_dssp BTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSS-----CHHHHHHHHHH-
T ss_pred cCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--------CcEEEEEEcCC-----CHHHHHHHHHH-
Confidence 3567899999999999999999999998876 56888777652 68999998621 24444455432
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
..++|..+.-++ ..+.+.|++.+.|+++++|++|+++
T Consensus 77 ~~~~~~~~~d~~-------~~~~~~~~i~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 77 YNLNFTNLNDAD-------GVIWARYNVPWQPAFVFYRADGTST 113 (136)
T ss_dssp HTCCSEEEECTT-------SHHHHHTTCCSSSEEEEECTTSCEE
T ss_pred cCCCceEEECCc-------hhHHHhcCCCCCCEEEEECCCCcEE
Confidence 244555443221 2355678999999999999999997
No 32
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.59 E-value=7.4e-08 Score=88.54 Aligned_cols=105 Identities=20% Similarity=0.200 Sum_probs=73.1
Q ss_pred CCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccC-------------CCCc
Q 005245 334 PTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDR-------------STPW 398 (706)
Q Consensus 334 ~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~-------------s~~w 398 (706)
.+|+.+.++.++||.|+|+|.+.||++|.. +.|.++|++.+ +++||.|++-.. ...=
T Consensus 25 ~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--------~v~vv~i~~d~~~~~~~~~~~~~~~~~~~ 96 (165)
T 3ha9_A 25 IDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--------EISVIAIDFWTAEALKALGLNKPGYPPPD 96 (165)
T ss_dssp TTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--------TEEEEEEECCSHHHHHHHTCCSTTSCCCC
T ss_pred CCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--------CcEEEEEEecccccccccccccccCCCCC
Confidence 467899999999999999999999999876 56888887762 699999986200 0000
Q ss_pred ChhhHHHHHHhhcCC-CceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 399 TEAKEHKFEALQYMM-PWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 399 ~D~de~~Fe~~~~~M-PWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.++-++|-.-+ .+ +|..+- | ...+.+.|++.+.|+++++|++|+++.
T Consensus 97 ~~~~~~~~~~~~-~~~~~~~~~-----d---~~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 97 TPEMFRKFIANY-GDPSWIMVM-----D---DGSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp CHHHHHHHHHHH-SCTTSEEEE-----C---CSHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred CHHHHHHHHHHc-CCCCeeEEe-----C---hHHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 223333343322 22 333222 2 234566789999999999999999988
No 33
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.58 E-value=4.4e-07 Score=83.16 Aligned_cols=117 Identities=16% Similarity=0.355 Sum_probs=78.5
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccC---CCCcChhhHHHHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDR---STPWTEAKEHKFE 407 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~---s~~w~D~de~~Fe 407 (706)
..+|+.|.+++++||.|+|+|.+.||++|.. +.|.++|++++. .+++||.|++ |. ...-+.+.-++|-
T Consensus 19 ~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~vs~-d~~~~~~~~~~~~~~~~~ 91 (170)
T 2p5q_A 19 DAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKD------QGLEILAFPC-NQFGEEEPGTNDQITDFV 91 (170)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEEC-CTTTTCCCSCHHHHHHHH
T ss_pred cCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhcc------CCEEEEEEEC-CCCCCCCCCCHHHHHHHH
Confidence 3578899999999999999999999999854 789999999973 2599999986 21 0001233445554
Q ss_pred H--hhcCCCcee-eccCCCCCHHHHHHHH-HhhCC--CCCc---EEEEECCCCceecc
Q 005245 408 A--LQYMMPWFS-VHHPSAIDPAVIRYAK-EKWDF--RKKP---ILVVLDPQGRVVNQ 456 (706)
Q Consensus 408 ~--~~~~MPWyA-Vpf~~~id~~~~r~ik-e~~~~--~~iP---~LVvL~pqGkv~~~ 456 (706)
. +.-..|++. +.-......+..++++ +.+++ .++| +.+++|++|+++..
T Consensus 92 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~ 149 (170)
T 2p5q_A 92 CTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDR 149 (170)
T ss_dssp HHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEE
T ss_pred HHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEe
Confidence 3 333445543 1111111113445554 34566 7889 99999999999875
No 34
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.58 E-value=3.1e-07 Score=88.67 Aligned_cols=114 Identities=11% Similarity=0.099 Sum_probs=79.0
Q ss_pred CCCCceeecceecCcEEEEEEecCCCCh-hH--HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSN-EE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~-~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.|.+++++||.|+|+|.+.||++ |. ++.|.++|+++++. .+.+++||+|++ |...+ +.+..+.|-+-
T Consensus 28 d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~---~~~~v~vv~Is~-D~~~d-~~~~~~~~~~~ 102 (200)
T 2b7k_A 28 DMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSK---YGITLQPLFITC-DPARD-SPAVLKEYLSD 102 (200)
T ss_dssp ETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHH---HCCCCEEEEEES-CTTTC-CHHHHHHHHTT
T ss_pred cCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHh---hCCceEEEEEEC-CCCCC-CHHHHHHHHHH
Confidence 3578899999999999999999999997 75 47899999999742 145799999986 31000 12233344332
Q ss_pred hcCCCceeeccCCCCCHHHHHHHHHhhCCC-CCc---------------EEEEECCCCceecc
Q 005245 410 QYMMPWFSVHHPSAIDPAVIRYAKEKWDFR-KKP---------------ILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 ~~~MPWyAVpf~~~id~~~~r~ike~~~~~-~iP---------------~LVvL~pqGkv~~~ 456 (706)
+ ..+|..++- +......+.+.|++. ++| ..+++|++|+++..
T Consensus 103 ~-~~~~~~l~~----~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~ 160 (200)
T 2b7k_A 103 F-HPSILGLTG----TFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDA 160 (200)
T ss_dssp S-CTTCEEEEC----CHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEE
T ss_pred c-CCCceEEeC----CHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEE
Confidence 2 356776664 234556666778886 454 78999999999854
No 35
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.57 E-value=1.2e-07 Score=90.37 Aligned_cols=115 Identities=10% Similarity=0.139 Sum_probs=76.7
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEeccc--CCCCcChhhHHHHHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVD--RSTPWTEAKEHKFEA 408 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd--~s~~w~D~de~~Fe~ 408 (706)
..+|+.|.+++++||.|+|+|-+.||++|. ++.|.++|+++++ .+++||.|++-+ ..... +.+...+
T Consensus 33 d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~~~vi~is~d~~~~~e~~---~~~~~~~ 103 (187)
T 3dwv_A 33 DADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKS------QGFTVLAFPSNQFGGQEPG---NEEEIKE 103 (187)
T ss_dssp BTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGG------GTCEEEEEEBCCCSSCSSS---BTTHHHH
T ss_pred cCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhh------CCeEEEEEECcccCCCCCC---CHHHHHH
Confidence 357789999999999999999999987764 5789999999973 259999998721 00011 2233443
Q ss_pred hhc---CCCceeec--c-CCCCCHHHHHHHHH----hhCCCCCc---EEEEECCCCceecc
Q 005245 409 LQY---MMPWFSVH--H-PSAIDPAVIRYAKE----KWDFRKKP---ILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 ~~~---~MPWyAVp--f-~~~id~~~~r~ike----~~~~~~iP---~LVvL~pqGkv~~~ 456 (706)
+.. .++|..+. . ......+..+++++ .+++..+| +.+++|++|+++..
T Consensus 104 ~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~ 164 (187)
T 3dwv_A 104 FVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVER 164 (187)
T ss_dssp SCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEE
T ss_pred HHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEE
Confidence 332 44544432 1 11111234556654 34667788 99999999999865
No 36
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.57 E-value=1.4e-07 Score=85.11 Aligned_cols=106 Identities=9% Similarity=0.059 Sum_probs=76.8
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.++.++||.|+|+|.+.||++|.. +.|.+++++.+ +.+++||.|++ |. -+.+.-++|-...
T Consensus 15 ~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~------~~~~~~v~v~~-d~---~~~~~~~~~~~~~ 84 (154)
T 3kcm_A 15 TLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMA------GKPFRMLCVSI-DE---GGKVAVEEFFRKT 84 (154)
T ss_dssp CTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT------TSSEEEEEEEC-CT---THHHHHHHHHHHH
T ss_pred cCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc------cCCeEEEEEEc-CC---cchHHHHHHHHHc
Confidence 4578899999999999999999999988766 57999998885 34699999986 21 1133334443332
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..+|..+.-+ ...+.+.|++.+.|..+++|++|+++..
T Consensus 85 -~~~~~~~~d~-------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 122 (154)
T 3kcm_A 85 -GFTLPVLLDA-------DKRVGKLYGTTGVPETFVIDRHGVILKK 122 (154)
T ss_dssp -CCCCCEEECT-------TCHHHHHHTCCSBCEEEEECTTSBEEEE
T ss_pred -CCCeeEEecC-------chHHHHHhCCCCCCeEEEECCCCcEEEE
Confidence 3455443322 1235677899999999999999999754
No 37
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.56 E-value=2e-07 Score=91.89 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=83.3
Q ss_pred CCCCccccCC-----CCceeecceecCcEEEEEEec-CCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCC
Q 005245 325 DDQLPLVECP-----TKRKVSIDVLRRKSVLLLVSD-LDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRST 396 (706)
Q Consensus 325 ~~~~pl~dg~-----~~~kV~Is~L~gK~VlL~fSa-l~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~ 396 (706)
++..|-|... +|+.|.+++++||.|+|+|-+ .||++|.. +.|.++|+++++ .+++||.|++ |
T Consensus 43 G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~------~~v~vv~Is~-D--- 112 (222)
T 3ztl_A 43 NRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNS------RNCQVIACST-D--- 112 (222)
T ss_dssp SEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S---
T ss_pred CCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEEC-C---
Confidence 3334555443 448999999999999999996 99987655 689999999973 3599999986 4
Q ss_pred CcChhhHHHHHHhh------cCCCceeeccCCCCCHHHHHHHHHhhCCC------CCcEEEEECCCCceecc
Q 005245 397 PWTEAKEHKFEALQ------YMMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 397 ~w~D~de~~Fe~~~------~~MPWyAVpf~~~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 456 (706)
+.++.+.|.+.. ..++|..+.-++ ..+.+.|++. ..|..+++|++|+++..
T Consensus 113 --~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~-------~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~ 175 (222)
T 3ztl_A 113 --SQYSHLAWDNLDRKSGGLGHMKIPLLADRK-------QEISKAYGVFDEEDGNAFRGLFIIDPNGILRQI 175 (222)
T ss_dssp --CHHHHHHHHHSCGGGTSCCSCSSCEEECSS-------SHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEE
T ss_pred --CHHHHHHHHHHhhhhccccccceeEEeCCc-------hHHHHHcCCeecCCCCccceEEEECCCCeEEEE
Confidence 244566676543 156666554332 3455667887 88999999999999865
No 38
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.56 E-value=3.1e-07 Score=85.63 Aligned_cols=117 Identities=15% Similarity=0.216 Sum_probs=72.7
Q ss_pred CCCceeecceecCcEEEEEEecCCCChhH-HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCc--ChhhHHHHH--H
Q 005245 334 PTKRKVSIDVLRRKSVLLLVSDLDVSNEE-LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPW--TEAKEHKFE--A 408 (706)
Q Consensus 334 ~~~~kV~Is~L~gK~VlL~fSal~~~~~e-~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w--~D~de~~Fe--~ 408 (706)
.+|+.|++++++||.|+|+|.+.||++|. ++.|.++|+++++ .+++||.|++-+...+. +.+..++|- .
T Consensus 20 ~~G~~~~l~~~~Gk~vll~F~a~wC~~C~~~~~l~~l~~~~~~------~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~ 93 (171)
T 3cmi_A 20 KKGQPFPFDQLKGKVVLIVNVASKCGFTPQYKELEALYKRYKD------EGFTIIGFPCNQFGHQEPGSDEEIAQFCQLN 93 (171)
T ss_dssp TTSCBCCGGGGTTCEEEEEEEESSSCCHHHHHHHHHHHHHHGG------GTEEEEEEEECSCC-----------------
T ss_pred CCCCEecHHHcCCCEEEEEEEecCCCcchhHHHHHHHHHHhcc------CCeEEEEEECcccCCCCCCCHHHHHHHHHhc
Confidence 46789999999999999999999988875 4679999999973 35999999862100001 112223443 2
Q ss_pred hhcCCCceeeccCC-CCCHHHHHHHH-HhhCCCCCc------EEEEECCCCceecc
Q 005245 409 LQYMMPWFSVHHPS-AIDPAVIRYAK-EKWDFRKKP------ILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 ~~~~MPWyAVpf~~-~id~~~~r~ik-e~~~~~~iP------~LVvL~pqGkv~~~ 456 (706)
+.-..|+++-+-+. ..-.+..+++. +.+++.+.| +.+++|++|+++..
T Consensus 94 ~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~ 149 (171)
T 3cmi_A 94 YGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYER 149 (171)
T ss_dssp -CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEE
T ss_pred cCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEE
Confidence 22233433311111 00112344443 468999999 99999999999865
No 39
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.55 E-value=2e-07 Score=87.38 Aligned_cols=113 Identities=12% Similarity=0.053 Sum_probs=77.0
Q ss_pred CCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcC
Q 005245 335 TKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYM 412 (706)
Q Consensus 335 ~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~ 412 (706)
+|+.+.++.++||.|+|+|-+.||++|.. +.|.++|++++...-+...+++||.|++ |. -+.+.-++|-.- ..
T Consensus 48 ~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~-d~---~~~~~~~~~~~~-~~ 122 (183)
T 3lwa_A 48 EGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINV-RD---YSRDIAQDFVTD-NG 122 (183)
T ss_dssp TTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEEC-SC---CCHHHHHHHHHH-TT
T ss_pred CCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEEC-CC---CCHHHHHHHHHH-cC
Confidence 78899999999999999999999998865 6799999999753111234559999976 21 022333444332 24
Q ss_pred CCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 413 MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 413 MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
+||..+.-++ ....+.+. .|++.++|..+++|++|+++..
T Consensus 123 ~~~~~~~d~~---~~~~~~~~-~~~v~~~P~~~lid~~G~i~~~ 162 (183)
T 3lwa_A 123 LDYPSIYDPP---FMTAASLG-GVPASVIPTTIVLDKQHRPAAV 162 (183)
T ss_dssp CCSCEEECTT---CGGGGGTT-TCCTTCCSEEEEECTTSCEEEE
T ss_pred CCccEEECCc---chHHHHhc-cCCCCCCCeEEEECCCCcEEEE
Confidence 6666654432 22222222 2578999999999999999753
No 40
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.55 E-value=1e-07 Score=91.20 Aligned_cols=101 Identities=11% Similarity=0.106 Sum_probs=75.7
Q ss_pred ceeecceecCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhc--
Q 005245 337 RKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY-- 411 (706)
Q Consensus 337 ~kV~Is~L~gK~VlL~fS-al~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~-- 411 (706)
+.|++++++||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.+..+.|-.-+.
T Consensus 36 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Vs~-d-----~~~~~~~~~~~~~~~ 103 (195)
T 2bmx_A 36 TTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFED------RDAQILGVSI-D-----SEFAHFQWRAQHNDL 103 (195)
T ss_dssp EEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHHHCTTG
T ss_pred cEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHHhccc
Confidence 799999999999999999 99988875 4789999999973 3699999986 3 1344555654331
Q ss_pred -CCCceeeccCCCCCHHHHHHHHHhhCCC-----CCcEEEEECCCCceecc
Q 005245 412 -MMPWFSVHHPSAIDPAVIRYAKEKWDFR-----KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 412 -~MPWyAVpf~~~id~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~ 456 (706)
.++|..+.-+ ...+.+.|++. ..|+++++|++|+++..
T Consensus 104 ~~~~~~~~~d~-------~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 147 (195)
T 2bmx_A 104 KTLPFPMLSDI-------KRELSQAAGVLNADGVADRVTFIVDPNNEIQFV 147 (195)
T ss_dssp GGCCSCEEECT-------TSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEE
T ss_pred cCCceeEEeCC-------chHHHHHhCCcccCCCccceEEEEcCCCeEEEE
Confidence 3454433322 13455678998 99999999999999875
No 41
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.54 E-value=6.5e-07 Score=82.53 Aligned_cols=114 Identities=11% Similarity=0.129 Sum_probs=76.9
Q ss_pred CCCCceeecceecCcEEEEEEecCCCC-hh--HHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVS-NE--ELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~-~~--e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.+.+++++||.|+|+|-+.||+ +| +++.|.++|+++++ .+.+++||.|++ |... =+.+..+.|-+-
T Consensus 20 ~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~----~~~~~~vv~is~-d~~~-d~~~~~~~~~~~ 93 (174)
T 1xzo_A 20 NQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKA----ENIDVRIISFSV-DPEN-DKPKQLKKFAAN 93 (174)
T ss_dssp CTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHH----TTCCCEEEEEES-CTTT-CCHHHHHHHHTT
T ss_pred cCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhh----cCCcEEEEEEEe-CCCC-CCHHHHHHHHHH
Confidence 457889999999999999999999987 44 66889999999974 234799999986 3100 012233444332
Q ss_pred hcCCCc---eeeccCCCCCHHHHHHHH-Hh-----------hCCCCCcEEEEECCCCceecc
Q 005245 410 QYMMPW---FSVHHPSAIDPAVIRYAK-EK-----------WDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 ~~~MPW---yAVpf~~~id~~~~r~ik-e~-----------~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..++| ..+.-+ +.+..+.+. .. +++...|+.+++|++|+++..
T Consensus 94 -~~~~~~~~~~l~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~ 151 (174)
T 1xzo_A 94 -YPLSFDNWDFLTGY---SQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKD 151 (174)
T ss_dssp -SCCCGGGEEEEBCS---CHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEE
T ss_pred -cCCCCcceEEEeCC---CHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEE
Confidence 23444 333222 244444332 23 356789999999999999864
No 42
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.94 E-value=1e-08 Score=93.78 Aligned_cols=105 Identities=16% Similarity=0.204 Sum_probs=73.1
Q ss_pred CCCceeecceecCcEEEEEEecCCCChhHH--HHHHH-HHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 334 PTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQ-MYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 334 ~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~-iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
.+|+.+.+++++||.|+|+|.+.||++|.. +.|.+ +|++.+ .+.+++||.|++ |.+.+..+.+.
T Consensus 21 ~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~-----~~~~~~vv~v~~--------d~~~~~~~~~~ 87 (159)
T 2ls5_A 21 TDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHK-----DNADFALIGIDR--------DEPLEKVLAFA 87 (159)
Confidence 467889999999999999999999988765 56887 887774 245799999975 22223333333
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhC--CCCCcEEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWD--FRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~--~~~iP~LVvL~pqGkv~~~ 456 (706)
..+.+ +||-..|. ...+.+.|+ +.+.|+++++|++|+++..
T Consensus 88 ~~~~~---~~~~~~d~--~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 130 (159)
T 2ls5_A 88 KSTGV---TYPLGLDP--GADIFAKYALRDAGITRNVLIDREGKIVKL 130 (159)
Confidence 33322 33322232 234566778 5679999999999998853
No 43
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.53 E-value=5.8e-07 Score=84.32 Aligned_cols=109 Identities=18% Similarity=0.176 Sum_probs=77.0
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.+++++||.|+|+|-+.||++|.. +.|.++|++++ +.+++||.|++ |. -+.+..+.|-+-+
T Consensus 47 ~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~------~~~~~vv~v~~-d~---~~~~~~~~~~~~~ 116 (186)
T 1jfu_A 47 DADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLS------GPNFEVVAINI-DT---RDPEKPKTFLKEA 116 (186)
T ss_dssp CTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHC------BTTEEEEEEEC-CC---SCTTHHHHHHHHT
T ss_pred cCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhc------cCCcEEEEEEC-CC---CCHHHHHHHHHHc
Confidence 4678899999999999999999999988765 67999999985 35699999986 31 1123345554433
Q ss_pred c--CCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 411 Y--MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~--~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
. ..|++.-+ +....+.+.-..+..+.|+.+++|++|+++..
T Consensus 117 ~~~~~~~~~d~-----~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 117 NLTRLGYFNDQ-----KAKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp TCCTTCCEECT-----TCHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred CCCCCceEECC-----cchHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 2 35665422 22444444333333589999999999999864
No 44
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.53 E-value=5.4e-07 Score=79.85 Aligned_cols=117 Identities=9% Similarity=0.053 Sum_probs=78.8
Q ss_pred CCCCccccC----CCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCc
Q 005245 325 DDQLPLVEC----PTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPW 398 (706)
Q Consensus 325 ~~~~pl~dg----~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w 398 (706)
++..|-|.. .+|..+.++.++||.|+|+|.+.||++|.. +.|.++|++.+ +. +++|.|++-+....=
T Consensus 4 g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~------~~-~~~~~v~~~~~~~~~ 76 (148)
T 2b5x_A 4 RQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQ------DQ-LNVVAVHMPRSEDDL 76 (148)
T ss_dssp TCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHT------TT-SEEEEEECCCSTTTS
T ss_pred CCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhc------CC-cEEEEEEcCCCcccc
Confidence 334455654 468889999999999999999999988866 57889888885 22 999999862111000
Q ss_pred ChhhHHHHHHhhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 399 TEAKEHKFEALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 399 ~D~de~~Fe~~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
+.++-+.|-.- ..++|..+.-+ ...+.+.|++.+.|+++++|++|+++..
T Consensus 77 ~~~~~~~~~~~-~~~~~~~~~d~-------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 77 DPGKIKETAAE-HDITQPIFVDS-------DHALTDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp SHHHHHHHHHH-TTCCSCEEECS-------SCHHHHHTCCCCSSEEEEECTTCBEEEE
T ss_pred CHHHHHHHHHH-cCCCcceEECC-------chhHHHHhCCCCCCEEEEECCCCcEEEE
Confidence 22333344322 23444433221 1235567899999999999999998863
No 45
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.53 E-value=5.8e-07 Score=84.81 Aligned_cols=117 Identities=13% Similarity=0.130 Sum_probs=77.1
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEeccc--CCCCcChhhHHHHHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVD--RSTPWTEAKEHKFEA 408 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd--~s~~w~D~de~~Fe~ 408 (706)
..+|+.+++++++||.|+|+|.+.||++|.. +.|.++|+++++ .+++||.|++-+ .-...+.++-++|-.
T Consensus 34 ~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~vs~d~~~~~e~~~~~~~~~~~~ 107 (183)
T 2obi_A 34 DIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAE------CGLRILAFPCNQFGKQEPGSNEEIKEFAA 107 (183)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred cCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhc------CCeEEEEEECCCCCCCCCCCHHHHHHHHH
Confidence 3578899999999999999999999998754 789999999973 359999998621 000123444555532
Q ss_pred hhcCCCceeec---cCCCCCHHHHHHHHHhh---C-----CCCCcEEEEECCCCceecc
Q 005245 409 LQYMMPWFSVH---HPSAIDPAVIRYAKEKW---D-----FRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 ~~~~MPWyAVp---f~~~id~~~~r~ike~~---~-----~~~iP~LVvL~pqGkv~~~ 456 (706)
- ...+|..+- .......+..+++++.. + ++.+|+.+++|++|+++..
T Consensus 108 ~-~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 165 (183)
T 2obi_A 108 G-YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 165 (183)
T ss_dssp T-TTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEE
T ss_pred H-cCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEE
Confidence 2 233443332 11111113455565443 2 4557999999999999864
No 46
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.53 E-value=1.1e-07 Score=82.83 Aligned_cols=100 Identities=12% Similarity=0.087 Sum_probs=71.8
Q ss_pred CCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhc
Q 005245 334 PTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 411 (706)
Q Consensus 334 ~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~ 411 (706)
.+|..+.++.++||.|+|+|.+.||++|.. +.|.+++++.+ +++++.|++-+ +.+.-++|-.-.
T Consensus 13 ~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~-----~~~~~~~~~~~~- 78 (136)
T 1zzo_A 13 LDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--------EVTFVGVAGLD-----QVPAMQEFVNKY- 78 (136)
T ss_dssp TTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSS-----CHHHHHHHHHHT-
T ss_pred CCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--------CeEEEEEeCCC-----CHHHHHHHHHHc-
Confidence 467899999999999999999999988866 56888777652 68999998621 233333443322
Q ss_pred CC-CceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 412 MM-PWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 412 ~M-PWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
.+ +|-.+.-++ ..+.+.|++.+.|+++++|++|+++
T Consensus 79 ~~~~~~~~~d~~-------~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 79 PVKTFTQLADTD-------GSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp TCTTSEEEECTT-------CHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred CCCceEEEEcCC-------cHHHHHcCCCCCceEEEECCCCCEE
Confidence 23 444333221 2355678999999999999999996
No 47
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.52 E-value=6.3e-07 Score=85.03 Aligned_cols=117 Identities=13% Similarity=0.143 Sum_probs=76.8
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEecccC---CCCcChhhHHHHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDR---STPWTEAKEHKFE 407 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~---s~~w~D~de~~Fe 407 (706)
..+|+.|++++++||.|+|+|.+.||++|. ++.|.++|+++++ .+++||.|++ |. ..+++.++-++|-
T Consensus 36 ~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~------~~v~vv~is~-d~~~~~~~~~~~~~~~~~ 108 (185)
T 2gs3_A 36 DIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAE------CGLRILAFPC-NQFGKQEPGSNEEIKEFA 108 (185)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEEC-CTTTTCCCSCHHHHHHHH
T ss_pred cCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhc------CCeEEEEEEC-cccCCCCCCCHHHHHHHH
Confidence 467889999999999999999999999885 4789999999973 3599999986 21 1123344445563
Q ss_pred -HhhcCCCcee-eccCCCCCHHHHHHHHHhh---C-----CCCCcEEEEECCCCceecc
Q 005245 408 -ALQYMMPWFS-VHHPSAIDPAVIRYAKEKW---D-----FRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 408 -~~~~~MPWyA-Vpf~~~id~~~~r~ike~~---~-----~~~iP~LVvL~pqGkv~~~ 456 (706)
.+.-..|.++ +........+..+++++.. + ++..|..+++|++|+++..
T Consensus 109 ~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~ 167 (185)
T 2gs3_A 109 AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKR 167 (185)
T ss_dssp HHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEE
T ss_pred HHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEe
Confidence 3333333332 1111111112445554433 3 3346999999999999864
No 48
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.52 E-value=4.6e-07 Score=83.21 Aligned_cols=103 Identities=13% Similarity=0.139 Sum_probs=77.2
Q ss_pred CCCCceeecceecCcEEEEEEec-CCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSD-LDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSa-l~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.|.+++++||.|+|+|-+ .||++|.. +.|.++|+++++ .+++||.|+. | +.+..++|-.-
T Consensus 22 ~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~------~~~~vv~vs~-d-----~~~~~~~~~~~ 89 (163)
T 3gkn_A 22 LSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDK------AGAKILGVSR-D-----SVKSHDNFCAK 89 (163)
T ss_dssp CSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHH------TTCEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----CHHHHHHHHHH
Confidence 46788999999999999888887 89887755 689999999974 3599999986 3 34555666553
Q ss_pred hcCCCceeeccCCCCCHHHHHHHHHhhCCCC------------CcEEEEECCCCceec
Q 005245 410 QYMMPWFSVHHPSAIDPAVIRYAKEKWDFRK------------KPILVVLDPQGRVVN 455 (706)
Q Consensus 410 ~~~MPWyAVpf~~~id~~~~r~ike~~~~~~------------iP~LVvL~pqGkv~~ 455 (706)
+ .++|..+.-++ . .+.+.|++.. .|..+++|++|+++.
T Consensus 90 ~-~~~~~~~~d~~---~----~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~ 139 (163)
T 3gkn_A 90 Q-GFAFPLVSDGD---E----ALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQ 139 (163)
T ss_dssp H-CCSSCEEECTT---C----HHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEE
T ss_pred h-CCCceEEECCc---H----HHHHHhCCccccccccccccCcceEEEEECCCCeEEE
Confidence 3 45555443221 2 3455678876 899999999999985
No 49
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.50 E-value=1e-07 Score=87.23 Aligned_cols=106 Identities=9% Similarity=-0.021 Sum_probs=75.8
Q ss_pred CCCCceeecceecCc-EEEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHH
Q 005245 333 CPTKRKVSIDVLRRK-SVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 408 (706)
Q Consensus 333 g~~~~kV~Is~L~gK-~VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~ 408 (706)
..+|+.|++++++|| .|+|+|- +.||++|.. +.|.++|++++ +.+++||.|++ | +.+..++|-+
T Consensus 22 ~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~------~~~~~vv~is~-d-----~~~~~~~~~~ 89 (160)
T 1xvw_A 22 DQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFE------NDDSAALAISV-G-----PPPTHKIWAT 89 (160)
T ss_dssp CTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTS------SSSEEEEEEES-C-----CHHHHHHHHH
T ss_pred cCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHH------HCCcEEEEEeC-C-----CHHHHHHHHH
Confidence 457889999999998 8999996 999999865 67888888875 24699999986 3 2344455544
Q ss_pred hhcCCCceeeccCCCCCHHHHHHHHHhhCCC----CCc--EEEEECCCCceecc
Q 005245 409 LQYMMPWFSVHHPSAIDPAVIRYAKEKWDFR----KKP--ILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 ~~~~MPWyAVpf~~~id~~~~r~ike~~~~~----~iP--~LVvL~pqGkv~~~ 456 (706)
-+ ..+|..+.- ......+.+.|++. ++| ..+++|++|+++..
T Consensus 90 ~~-~~~~~~~~d-----~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~ 137 (160)
T 1xvw_A 90 QS-GFTFPLLSD-----FWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFA 137 (160)
T ss_dssp HH-TCCSCEEEC-----TTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEE
T ss_pred hc-CCCceEEec-----CCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEE
Confidence 32 234433322 10012355678998 999 99999999999865
No 50
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.49 E-value=1.2e-07 Score=93.06 Aligned_cols=111 Identities=10% Similarity=0.007 Sum_probs=77.2
Q ss_pred cCCCCceeecceecCcE-EEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCC--CcChhhHHHH
Q 005245 332 ECPTKRKVSIDVLRRKS-VLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRST--PWTEAKEHKF 406 (706)
Q Consensus 332 dg~~~~kV~Is~L~gK~-VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~--~w~D~de~~F 406 (706)
...+|+.|.+++++||. |+|+|.+.||++|.. +.|.++|++++. .+++||.|++-+... .-+.+.-++|
T Consensus 44 ~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Vs~d~~~~~~~d~~~~~~~~ 117 (218)
T 3u5r_E 44 PDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAG------QGLAVVAINSNDAQAFPEETLERVGAE 117 (218)
T ss_dssp ECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTT------TTEEEEEEECSCTTTCGGGSHHHHHHH
T ss_pred ECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHh------CCcEEEEEECCcccccccCCHHHHHHH
Confidence 34788899999999995 999999999988654 789999999962 359999998621100 0123334444
Q ss_pred HHhhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 407 EALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 407 e~~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
-+-+ .++|..+.-+ -..+.+.|++.++|.++++|++|+++..
T Consensus 118 ~~~~-~~~~~~l~D~-------~~~~~~~~~v~~~P~~~liD~~G~i~~~ 159 (218)
T 3u5r_E 118 VKAY-GYGFPYLKDA-------SQSVAKAYGAACTPDFFLYDRERRLVYH 159 (218)
T ss_dssp HHHH-TCCSCEEECT-------TCHHHHHHTCCEESEEEEECTTCBEEEE
T ss_pred HHHh-CCCccEEECC-------ccHHHHHcCCCCCCeEEEECCCCcEEEe
Confidence 3322 2344333221 1235667899999999999999999843
No 51
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.47 E-value=1.7e-06 Score=81.63 Aligned_cols=116 Identities=20% Similarity=0.297 Sum_probs=79.2
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccC--CCCcChhhHHHHHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDR--STPWTEAKEHKFEA 408 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~--s~~w~D~de~~Fe~ 408 (706)
..+|+.|++++++||.|+|+|-+.||++|.. +.|.++|++++. .+++||-|++-+- ..+-+.++-++|-.
T Consensus 25 d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~~~vi~is~d~~~~~~~d~~~~~~~~~~ 98 (180)
T 3kij_A 25 DAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGP------SHFSVLAFPCNQFGESEPRPSKEVESFAR 98 (180)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTT------TSEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred cCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhcc------CCeEEEEEECCccccCCCCCHHHHHHHHH
Confidence 3578899999999999999999999988765 689999999962 3599999986210 00113444555643
Q ss_pred --hhcCCCceeecc-CCCCCHHHHHHHHHhhCCCCCcE----EEEECCCCceecc
Q 005245 409 --LQYMMPWFSVHH-PSAIDPAVIRYAKEKWDFRKKPI----LVVLDPQGRVVNQ 456 (706)
Q Consensus 409 --~~~~MPWyAVpf-~~~id~~~~r~ike~~~~~~iP~----LVvL~pqGkv~~~ 456 (706)
+.-..|.++-.. .........+++.... .+.|. .+++|++|+++..
T Consensus 99 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~~p~~~~~~~lid~~G~i~~~ 151 (180)
T 3kij_A 99 KNYGVTFPIFHKIKILGSEGEPAFRFLVDSS--KKEPRWNFWKYLVNPEGQVVKF 151 (180)
T ss_dssp HHHCCCSCBBCCCCCSSTTCCHHHHHHHHHH--TCCCSSTTCEEEECTTSCEEEE
T ss_pred HhcCCCCceeeeeeccCccccHHHHHHHhcC--CCCccccceEEEECCCCCEEEE
Confidence 444556554211 1111224566766654 47888 9999999999854
No 52
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.46 E-value=3.1e-07 Score=86.52 Aligned_cols=108 Identities=9% Similarity=0.016 Sum_probs=74.6
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCC---cChhhHHHHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTP---WTEAKEHKFE 407 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~---w~D~de~~Fe 407 (706)
..+|+.+.++.++||.|+|+|.+.||++|.. +.|.++|++.+ +. ++||.|++-+ ... -+.+.-+.|-
T Consensus 20 ~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~------~~-~~~v~v~~d~-~~~~~~d~~~~~~~~~ 91 (188)
T 2cvb_A 20 DPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYR------GK-VAFVGINAND-YEKYPEDAPEKMAAFA 91 (188)
T ss_dssp CTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTT------TT-EEEEEEECCC-TTTCGGGSHHHHHHHH
T ss_pred cCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhh------cC-eEEEEEEcCc-cccccccCHHHHHHHH
Confidence 3578899999999999999999999988754 78999999885 23 9999998621 000 0122333443
Q ss_pred HhhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 408 ALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 408 ~~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
.-+ .++|..+- |. ...+.+.|++.+.|+++++|++|+++..
T Consensus 92 ~~~-~~~~~~~~-----d~--~~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 92 EEH-GIFFPYLL-----DE--TQEVAKAYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp HHH-TCCSCEEE-----CS--SSHHHHHTTCCEESEEEEECTTCBEEEE
T ss_pred HHh-CCCceEEE-----CC--cchHHHHcCCCCCCeEEEECCCCcEEEE
Confidence 322 23332222 11 1235567899999999999999999866
No 53
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.46 E-value=3.3e-07 Score=82.52 Aligned_cols=105 Identities=10% Similarity=0.090 Sum_probs=76.5
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.+++++||.|+|+|.+.||++|.. +.|.+++++.+. .++.||.|++ |. -+.+.-++|-.-
T Consensus 15 ~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~-~~---~~~~~~~~~~~~- 83 (153)
T 2l5o_A 15 DLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKN------KNFQVLAVAQ-PI---DPIESVRQYVKD- 83 (153)
T ss_dssp CTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGG------TTEEEEEEEC-TT---SCHHHHHHHHHH-
T ss_pred cCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc------CCeEEEEEec-CC---CCHHHHHHHHHH-
Confidence 3567899999999999999999999999865 679999988862 3699999975 21 123344455332
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+||-.+.-++ ..+.+.|++.+.|+++++|++|+++.
T Consensus 84 ~~~~~~~~~d~~-------~~~~~~~~i~~~P~~~lid~~G~i~~ 121 (153)
T 2l5o_A 84 YGLPFTVMYDAD-------KAVGQAFGTQVYPTSVLIGKKGEILK 121 (153)
T ss_dssp TTCCSEEEECSS-------CHHHHHHTCCSSSEEEEECSSSCCCE
T ss_pred cCCCceEEcCch-------HHHHHHcCCCccCeEEEECCCCcEEE
Confidence 345654333221 23566789999999999999999874
No 54
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.43 E-value=6e-07 Score=84.97 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=76.4
Q ss_pred eeecceecCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhc---
Q 005245 338 KVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY--- 411 (706)
Q Consensus 338 kV~Is~L~gK~VlL~fS-al~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~--- 411 (706)
.+.+++++||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.+..+.|-.-+.
T Consensus 23 ~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~vs~-d-----~~~~~~~~~~~~~~~~ 90 (187)
T 1we0_A 23 EVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKK------LGVEVYSVST-D-----THFVHKAWHENSPAVG 90 (187)
T ss_dssp EEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHH------TTEEEEEEES-S-----CHHHHHHHHHSCHHHH
T ss_pred EecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHH------cCCEEEEEEC-C-----CHHHHHHHHHHhcccc
Confidence 99999999999999999 99988764 5789999999973 2699999986 3 1344555655442
Q ss_pred CCCceeeccCCCCCHHHHHHHHHhhCCC------CCcEEEEECCCCceecc
Q 005245 412 MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 412 ~MPWyAVpf~~~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 456 (706)
.++|..+.-++ ..+.+.|++. ..|+.+++|++|+++..
T Consensus 91 ~~~~~~~~d~~-------~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~ 134 (187)
T 1we0_A 91 SIEYIMIGDPS-------QTISRQFDVLNEETGLADRGTFIIDPDGVIQAI 134 (187)
T ss_dssp TCCSEEEECTT-------CHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCceEEECCc-------hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEE
Confidence 56765544321 3445667888 89999999999999865
No 55
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.41 E-value=1.8e-07 Score=89.50 Aligned_cols=108 Identities=12% Similarity=0.122 Sum_probs=77.4
Q ss_pred CCc---eeeccee-cCcEEEEEEe-cCCCChh--HHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHH
Q 005245 335 TKR---KVSIDVL-RRKSVLLLVS-DLDVSNE--ELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFE 407 (706)
Q Consensus 335 ~~~---kV~Is~L-~gK~VlL~fS-al~~~~~--e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe 407 (706)
+|+ .|+++++ +||.|+|+|. +.||++| +++.|.++|++++. .+++||.|++ | +.+..+.|-
T Consensus 18 ~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-d-----~~~~~~~~~ 85 (198)
T 1zof_A 18 NNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHE------KGFNVIGVSI-D-----SEQVHFAWK 85 (198)
T ss_dssp TSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHHHHHH
T ss_pred CCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEEC-C-----CHHHHHHHH
Confidence 566 8999999 9999999999 9998776 56889999999973 3699999986 3 133444454
Q ss_pred Hh-hcCCCceeeccCCCCCHHHHHHHHHhhCCC-----CCcEEEEECCCCceecc
Q 005245 408 AL-QYMMPWFSVHHPSAIDPAVIRYAKEKWDFR-----KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 408 ~~-~~~MPWyAVpf~~~id~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~ 456 (706)
+- .....|+.++|+-..|. .+.+.+.|++. .+|..+++|++|+++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~ 138 (198)
T 1zof_A 86 NTPVEKGGIGQVSFPMVADI--TKSISRDYDVLFEEAIALRGAFLIDKNMKVRHA 138 (198)
T ss_dssp TSCGGGTCCCCCSSCEEECT--TSHHHHHTTCEETTTEECEEEEEEETTTEEEEE
T ss_pred HhhhhcccccCceeEEEECC--chHHHHHhCCcccCCcccceEEEECCCCEEEEE
Confidence 32 22223444444422222 23455678998 99999999999999875
No 56
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.40 E-value=3.5e-07 Score=87.09 Aligned_cols=104 Identities=15% Similarity=0.140 Sum_probs=77.0
Q ss_pred CC--ceeeccee-cCcEEEEEEe-cCCCChh--HHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHH
Q 005245 335 TK--RKVSIDVL-RRKSVLLLVS-DLDVSNE--ELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 408 (706)
Q Consensus 335 ~~--~kV~Is~L-~gK~VlL~fS-al~~~~~--e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~ 408 (706)
+| +.|+++++ +||.|+|+|- +.||++| +++.|.++|++++. .+++||.|++ | +.+..+.|-.
T Consensus 17 ~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~Is~-d-----~~~~~~~~~~ 84 (192)
T 2h01_A 17 DNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE------RNVELLGCSV-D-----SKFTHLAWKK 84 (192)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHHHHHHT
T ss_pred CCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEe-C-----CHHHHHHHHH
Confidence 56 89999999 9999999999 9998776 55789999999973 3599999986 3 2344455544
Q ss_pred hhc------CCCceeeccCCCCCHHHHHHHHHhhCCC-----CCcEEEEECCCCceeccc
Q 005245 409 LQY------MMPWFSVHHPSAIDPAVIRYAKEKWDFR-----KKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 409 ~~~------~MPWyAVpf~~~id~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~n 457 (706)
-+. .++|..+.-+ .+.+.+.|++. ..|..+++|++|+++...
T Consensus 85 ~~~~~~~~~~~~~~~l~D~-------~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~ 137 (192)
T 2h01_A 85 TPLSQGGIGNIKHTLISDI-------SKSIARSYDVLFNESVALRAFVLIDKQGVVQHLL 137 (192)
T ss_dssp SCGGGTCCCSCSSEEEECT-------TSHHHHHTTCEETTTEECCEEEEECTTSBEEEEE
T ss_pred hHHhhCCccCCCcCeEECC-------cHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEE
Confidence 332 4555433322 13456678998 899999999999998653
No 57
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.39 E-value=6e-07 Score=86.01 Aligned_cols=101 Identities=13% Similarity=0.071 Sum_probs=75.3
Q ss_pred ceeecceecCcEEEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhc--
Q 005245 337 RKVSIDVLRRKSVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY-- 411 (706)
Q Consensus 337 ~kV~Is~L~gK~VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~-- 411 (706)
+.|++++++||.|+|+|- +.||++|.. +.|.++|+++++ .+++||.|++ |+ .++.+.|-+-+.
T Consensus 25 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-d~-----~~~~~~~~~~~~~~ 92 (197)
T 1qmv_A 25 KEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK------LGCEVLGVSV-DS-----QFTHLAWINTPRKE 92 (197)
T ss_dssp EEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-SC-----HHHHHHHHTSCGGG
T ss_pred cEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-CC-----HHHHHHHHHHHHhh
Confidence 899999999999999999 999998765 679999999973 3699999986 31 334445544321
Q ss_pred ----CCCceeeccCCCCCHHHHHHHHHhhCCC------CCcEEEEECCCCceecc
Q 005245 412 ----MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 412 ----~MPWyAVpf~~~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 456 (706)
.++|..+.-+ .+.+.+.|++. ..|..+++|++|+++..
T Consensus 93 ~~~~~~~~p~l~D~-------~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~ 140 (197)
T 1qmv_A 93 GGLGPLNIPLLADV-------TRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQI 140 (197)
T ss_dssp TCCCSCSSCEEECT-------TCHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCCCCceEEEECC-------cHHHHHHcCCccCCCCceeeEEEEECCCCcEEEE
Confidence 4555433321 12455678888 79999999999999865
No 58
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.38 E-value=1.1e-06 Score=79.26 Aligned_cols=106 Identities=12% Similarity=0.088 Sum_probs=77.7
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.+.+++++ |.|+|+|.+.||++|.. +.|.++|++. +++||.|++ | .+.+.+....+.
T Consensus 18 ~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---------~v~~v~v~~-d-----~~~~~~~~~~~~ 81 (154)
T 3ia1_A 18 DPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---------GVPFYVISR-E-----PRDTREVVLEYM 81 (154)
T ss_dssp CTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---------CCCEEEEEC-C-----TTCCHHHHHHHH
T ss_pred CCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---------CCeEEEEeC-C-----CcccHHHHHHHH
Confidence 3478899999999 99999999999988766 5788888877 388999986 2 133445555555
Q ss_pred cCCCceeeccCCCCC-HHHHHHHHHhhCCCCCcEEEEECCCCceeccc
Q 005245 411 YMMPWFSVHHPSAID-PAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 411 ~~MPWyAVpf~~~id-~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 457 (706)
...++ +|+-..| ......+.+.|++.+.|.++++|++|+++...
T Consensus 82 ~~~~~---~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (154)
T 3ia1_A 82 KTYPR---FIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALF 126 (154)
T ss_dssp TTCTT---EEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEE
T ss_pred HHcCC---CcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEE
Confidence 55543 2222222 12356678889999999999999999988643
No 59
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.38 E-value=3.7e-07 Score=86.14 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=68.7
Q ss_pred ceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCC
Q 005245 337 RKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMP 414 (706)
Q Consensus 337 ~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MP 414 (706)
+.+.++.++||.|+|+|-+.||++|.. +.|.++|++ +++||.|++-| +.+.-+.|-+- ...|
T Consensus 49 ~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----------~v~vv~vs~~d-----~~~~~~~~~~~-~~~~ 112 (176)
T 3kh7_A 49 RRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----------GVVIYGINYKD-----DNAAAIKWLNE-LHNP 112 (176)
T ss_dssp SEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----------TCEEEEEEESC-----CHHHHHHHHHH-TTCC
T ss_pred ceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----------CCEEEEEeCCC-----CHHHHHHHHHH-cCCC
Confidence 789999999999999999999998866 456666543 49999998622 23333344322 2345
Q ss_pred ceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 415 WFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 415 WyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
|..+-... ...+.+.|++.+.|..+++|++|+++..
T Consensus 113 ~~~~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 148 (176)
T 3kh7_A 113 YLLSISDA------DGTLGLDLGVYGAPETYLIDKQGIIRHK 148 (176)
T ss_dssp CSEEEEET------TCHHHHHHTCCSSCEEEEECTTCBEEEE
T ss_pred CceEEECC------cchHHHHcCCCCCCeEEEECCCCeEEEE
Confidence 54322211 1245567899999999999999999853
No 60
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.37 E-value=7.6e-07 Score=81.69 Aligned_cols=113 Identities=15% Similarity=0.270 Sum_probs=78.6
Q ss_pred CCCCceeecceecCcEEEEEEecCCCCh-hHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSN-EEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~-~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+| .+.+++++||.|+|+|.+.||++ |.. +.|.++|++++.. ...+++||+|++ |.. .=+.+.-+.|-+-
T Consensus 23 ~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~---~~~~v~vv~is~-d~~-~d~~~~~~~~~~~ 96 (172)
T 2k6v_A 23 GPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPK---AQERVQVIFVSV-DPE-RDPPEVADRYAKA 96 (172)
T ss_dssp CSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHH---HHTTEEEEEEES-CTT-TCCHHHHHHHHHH
T ss_pred cCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhh---ccCCEEEEEEEE-CCC-CCCHHHHHHHHHH
Confidence 3567 99999999999999999999997 754 6799999888631 114799999986 320 0012344555543
Q ss_pred hcCCCceeeccCCCCCHHHHHHHHHhhC---------------CCCCcEEEEECCCCceeccc
Q 005245 410 QYMMPWFSVHHPSAIDPAVIRYAKEKWD---------------FRKKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 410 ~~~MPWyAVpf~~~id~~~~r~ike~~~---------------~~~iP~LVvL~pqGkv~~~n 457 (706)
+ ..+|..+.-+ ....+.+.+.|+ +.+.|+++++| +|+++...
T Consensus 97 ~-~~~~~~l~d~----~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~ 153 (172)
T 2k6v_A 97 F-HPSFLGLSGS----PEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLY 153 (172)
T ss_dssp H-CTTEEEECCC----HHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEE
T ss_pred h-CCCcEEEeCC----HHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEE
Confidence 3 3677666542 344455555555 46889999999 99998653
No 61
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.37 E-value=7.5e-07 Score=85.84 Aligned_cols=101 Identities=13% Similarity=0.105 Sum_probs=75.6
Q ss_pred ceeecceecCcEEEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhc--
Q 005245 337 RKVSIDVLRRKSVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY-- 411 (706)
Q Consensus 337 ~kV~Is~L~gK~VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~-- 411 (706)
+.|.+++++||.|+|+|- +.||++|.. +.|.++|+++++ .+++||.|++ | +.+..++|-+-+.
T Consensus 27 ~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~------~~v~vi~Is~-D-----~~~~~~~~~~~~~~~ 94 (202)
T 1uul_A 27 KKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD------IGCEVLACSM-D-----SEYSHLAWTSIERKR 94 (202)
T ss_dssp EEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHHSCGGG
T ss_pred cEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----CHHHHHHHHHHHHhh
Confidence 799999999999999999 999998764 689999999972 4699999986 3 2344555544331
Q ss_pred ----CCCceeeccCCCCCHHHHHHHHHhhCCC------CCcEEEEECCCCceecc
Q 005245 412 ----MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 412 ----~MPWyAVpf~~~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 456 (706)
.++|..+.-+ .+.+.+.|++. .+|..+++|++|+++..
T Consensus 95 ~~~~~~~~p~l~D~-------~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~ 142 (202)
T 1uul_A 95 GGLGQMNIPILADK-------TKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI 142 (202)
T ss_dssp TCCCSCSSCEEECT-------TCHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CCCCCCceeEEECC-------chHHHHHcCCccCCCCceeeEEEEECCCCEEEEE
Confidence 4455443322 13455667898 99999999999999865
No 62
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.37 E-value=2.1e-06 Score=81.26 Aligned_cols=114 Identities=10% Similarity=0.115 Sum_probs=80.2
Q ss_pred cCCCCceeecceecCcEEEEEEecCCCC---hhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcCh--hhHHHH
Q 005245 332 ECPTKRKVSIDVLRRKSVLLLVSDLDVS---NEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTE--AKEHKF 406 (706)
Q Consensus 332 dg~~~~kV~Is~L~gK~VlL~fSal~~~---~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D--~de~~F 406 (706)
-..+|+.|.+++|+||.|+|+|-..||+ +.+++.|.++|+.+++ .+.++.+|+|++ |+ ..| +.-++|
T Consensus 18 ~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~----~~~~v~~v~isv-Dp---~~Dtp~~l~~y 89 (170)
T 4hde_A 18 TNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKE----EKLDVQFVSFSV-DP---DLDKPENLKAF 89 (170)
T ss_dssp ECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHH----TTCCCEEEEEES-CT---TTCCHHHHHHH
T ss_pred ECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhc----ccccceeEeeec-Cc---ccccHHHHHHH
Confidence 3468899999999999999999999985 4456789999999974 456899999986 52 222 233556
Q ss_pred HHhhc--CCCceeeccCCCCCHHHHHHHHHhhCC----------CCCcEEEEECCCCceec
Q 005245 407 EALQY--MMPWFSVHHPSAIDPAVIRYAKEKWDF----------RKKPILVVLDPQGRVVN 455 (706)
Q Consensus 407 e~~~~--~MPWyAVpf~~~id~~~~r~ike~~~~----------~~iP~LVvL~pqGkv~~ 455 (706)
-+.+. ...|..+--++ .....+..+..|.. ..-|.++++||+|+++.
T Consensus 90 ~~~~~~~~~~~~~ltg~~--~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~ 148 (170)
T 4hde_A 90 IQKFTEDTSNWNLLTGYS--LEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMK 148 (170)
T ss_dssp HTTTCSCCTTEEEEBCSC--HHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEE
T ss_pred HHHcCCCCCCceecCccc--HHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEE
Confidence 54442 24587666543 23344555555543 33478999999999974
No 63
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.35 E-value=1.9e-06 Score=86.68 Aligned_cols=113 Identities=12% Similarity=0.052 Sum_probs=81.1
Q ss_pred CCCCcccc-----CCCCceeecceecCcEEEEEEec-CCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCC
Q 005245 325 DDQLPLVE-----CPTKRKVSIDVLRRKSVLLLVSD-LDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRST 396 (706)
Q Consensus 325 ~~~~pl~d-----g~~~~kV~Is~L~gK~VlL~fSa-l~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~ 396 (706)
++..|-|. ..+|+.|++++++||.|+|+|=+ .||++|.. +.|.++|+++++ .+++||.||. |
T Consensus 51 G~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~------~gv~vv~Is~-D--- 120 (240)
T 3qpm_A 51 SKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRA------INTEVVACSV-D--- 120 (240)
T ss_dssp TSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHT------TTEEEEEEES-S---
T ss_pred CCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEEC-C---
Confidence 34455555 33466999999999999999988 88887654 789999999973 3599999985 4
Q ss_pred CcChhhHHHHHHhh------cCCCceeeccCCCCCHHHHHHHHHhhCCC------CCcEEEEECCCCceecc
Q 005245 397 PWTEAKEHKFEALQ------YMMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 397 ~w~D~de~~Fe~~~------~~MPWyAVpf~~~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 456 (706)
+.+..+.|-.-. ..+||..+.-++ +.+.+.|++. ..|..+++|++|+++..
T Consensus 121 --~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~-------~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~ 183 (240)
T 3qpm_A 121 --SQFTHLAWIITPRKQGGLGPMKIPLLSDLT-------HQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQI 183 (240)
T ss_dssp --CHHHHHHHHHSCGGGTCCCSCSSCEEECTT-------SHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred --CHHHHHHHHHHHHhhcCCCCCceeEEeCch-------HHHHHHhCCccccCCCccceEEEEcCCCeEEEE
Confidence 244455665432 145655443322 3455667886 57999999999999865
No 64
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.35 E-value=6.5e-07 Score=88.25 Aligned_cols=105 Identities=13% Similarity=0.112 Sum_probs=77.6
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
+.+|+.|.+++++||.|+|+|- +.||++|. ++.|.++|++++. .+++||.|++ | +.++.+.|-+-
T Consensus 43 ~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~~ 110 (220)
T 1zye_A 43 SGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD------VNCEVVAVSV-D-----SHFSHLAWINT 110 (220)
T ss_dssp SSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH------TTEEEEEEES-S-----CHHHHHHHHTS
T ss_pred CCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHH
Confidence 4578899999999999999999 99988765 4789999999973 3599999986 3 13344455432
Q ss_pred h-c-----CCCceeeccCCCCCHHHHHHHHHhhCCC------CCcEEEEECCCCceecc
Q 005245 410 Q-Y-----MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 ~-~-----~MPWyAVpf~~~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 456 (706)
. . .++|..+.-+ .+.+.+.|++. ..|.++++|++|+++..
T Consensus 111 ~~~~~g~~~~~fp~l~D~-------~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~ 162 (220)
T 1zye_A 111 PRKNGGLGHMNIALLSDL-------TKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL 162 (220)
T ss_dssp CGGGTCCCSCSSEEEECT-------TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred HHHhCCCcCCceEEEECC-------cHHHHHHhCCeecCCCcccceEEEECCCCEEEEE
Confidence 2 1 4455433221 23456678998 99999999999999864
No 65
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.34 E-value=8.7e-07 Score=84.11 Aligned_cols=103 Identities=13% Similarity=0.119 Sum_probs=73.7
Q ss_pred CCCceeecceecCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 334 PTKRKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 334 ~~~~kV~Is~L~gK~VlL~fS-al~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
.+|+.|.+++++||.|+|+|- +.||++|. ++.|.++|+++++ .+++||.|+. | +.++.++|-+-+
T Consensus 39 ~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~------~~~~vv~Vs~-D-----~~~~~~~~~~~~ 106 (179)
T 3ixr_A 39 SGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQ------INATVLGVSR-D-----SVKSHDSFCAKQ 106 (179)
T ss_dssp GGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHT------TTEEEEEEES-C-----CHHHHHHHHHHH
T ss_pred CCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEcC-C-----CHHHHHHHHHHc
Confidence 467899999999998888876 99987764 4789999999973 3699999986 4 245566675432
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCC------------CcEEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRK------------KPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~------------iP~LVvL~pqGkv~~~ 456 (706)
.++|..+.-++ . .+.+.|++.. .|..+++||+|+++..
T Consensus 107 -~~~f~~l~D~~---~----~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~ 156 (179)
T 3ixr_A 107 -GFTFPLVSDSD---A----ILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEA 156 (179)
T ss_dssp -TCCSCEEECTT---C----HHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEE
T ss_pred -CCceEEEECCc---h----HHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEE
Confidence 34544333221 2 3445566643 6899999999999863
No 66
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.34 E-value=1.5e-06 Score=86.44 Aligned_cols=103 Identities=13% Similarity=0.133 Sum_probs=75.9
Q ss_pred CC--ceeeccee-cCcEEEEEEe-cCCCChh--HHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHH
Q 005245 335 TK--RKVSIDVL-RRKSVLLLVS-DLDVSNE--ELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 408 (706)
Q Consensus 335 ~~--~kV~Is~L-~gK~VlL~fS-al~~~~~--e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~ 408 (706)
+| +.|+++++ +||.|+|+|- +.||++| +++.|.++|+++++ .+++||.|++ | +.+..+.|-+
T Consensus 42 ~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~ 109 (221)
T 2c0d_A 42 NNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFEN------KNVELLGISV-D-----SVYSHLAWKN 109 (221)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHHHHHHH
T ss_pred CCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----CHHHHHHHHH
Confidence 56 89999999 9999999999 9998765 55789999999973 3699999986 4 2444556655
Q ss_pred hhc------CCCceeeccCCCCCHHHHHHHHHhhCC-----CCCcEEEEECCCCceecc
Q 005245 409 LQY------MMPWFSVHHPSAIDPAVIRYAKEKWDF-----RKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 ~~~------~MPWyAVpf~~~id~~~~r~ike~~~~-----~~iP~LVvL~pqGkv~~~ 456 (706)
-+. .++|..+--+ ...+.+.|++ ...|..+++|++|+++..
T Consensus 110 ~~~~~~g~~~~~fp~l~D~-------~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~ 161 (221)
T 2c0d_A 110 MPIEKGGIGNVEFTLVSDI-------NKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQ 161 (221)
T ss_dssp SCGGGTCCCSCSSEEEECT-------TSHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred HhhhhcCccCCceEEEECC-------chHHHHHcCCcccCCCccceEEEECCCCeEEEE
Confidence 442 4455433221 1234566787 368999999999999865
No 67
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.32 E-value=1.6e-06 Score=85.25 Aligned_cols=103 Identities=12% Similarity=0.099 Sum_probs=78.1
Q ss_pred CC--ceeeccee-cCcEEEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHH
Q 005245 335 TK--RKVSIDVL-RRKSVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 408 (706)
Q Consensus 335 ~~--~kV~Is~L-~gK~VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~ 408 (706)
+| +.|.++++ +||.|+|+|- +.||++|.. +.|.++|+++++ .+++||.|++ | +.+..++|-+
T Consensus 38 ~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~ 105 (213)
T 2i81_A 38 DNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE------RNVELLGCSV-D-----SKYTHLAWKK 105 (213)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH------TTEEEEEEES-S-----CHHHHHHHHS
T ss_pred CCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEeC-C-----CHHHHHHHHH
Confidence 56 79999999 9999999999 999988755 679999999973 3699999986 3 2344455554
Q ss_pred hhc------CCCceeeccCCCCCHHHHHHHHHhhCCC-----CCcEEEEECCCCceecc
Q 005245 409 LQY------MMPWFSVHHPSAIDPAVIRYAKEKWDFR-----KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 ~~~------~MPWyAVpf~~~id~~~~r~ike~~~~~-----~iP~LVvL~pqGkv~~~ 456 (706)
-+. .++|..+--+ .+.+.+.|++. ..|..+++|++|+++..
T Consensus 106 ~~~~~~g~~~~~fp~l~D~-------~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~ 157 (213)
T 2i81_A 106 TPLAKGGIGNIKHTLLSDI-------TKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHL 157 (213)
T ss_dssp SCGGGTCCCSCSSEEEECT-------TSHHHHHTTCEETTTEECEEEEEECTTSBEEEE
T ss_pred HHHhhCCccCCCceEEECC-------chHHHHHhCCccccCCcccEEEEECCCCEEEEE
Confidence 332 5666544322 23456678998 89999999999999865
No 68
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.32 E-value=3.8e-07 Score=86.06 Aligned_cols=109 Identities=8% Similarity=0.049 Sum_probs=75.5
Q ss_pred CCCCceeecceecCcE-EEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCC---cChhhHHHH
Q 005245 333 CPTKRKVSIDVLRRKS-VLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTP---WTEAKEHKF 406 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~-VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~---w~D~de~~F 406 (706)
..+|+.+.+++++||. |+|+|.+.||++|.. +.|.++|++.+. .+++||.|++ |.... -+.+.-+.|
T Consensus 32 ~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~~v~vv~v~~-d~~~~~~~d~~~~~~~~ 104 (196)
T 2ywi_A 32 VIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMP------KGVSFVAINS-NDAEQYPEDSPENMKKV 104 (196)
T ss_dssp TTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEEC-SCTTTCGGGSHHHHHHH
T ss_pred cCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHh------CCcEEEEEEC-CccccccccCHHHHHHH
Confidence 5678999999999995 999999999988754 689999999863 2599999986 21000 123334444
Q ss_pred HHhhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 407 EALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 407 e~~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
-.-+ ..+|..+--+ +. .+.+.|++.+.|+++++|++|+++..
T Consensus 105 ~~~~-~~~~~~~~d~---~~----~~~~~~~v~~~P~~~lid~~G~i~~~ 146 (196)
T 2ywi_A 105 AEEL-GYPFPYLYDE---TQ----EVAKAYDAACTPDFYIFDRDLKCVYR 146 (196)
T ss_dssp HHHH-TCCSCEEECS---SC----HHHHHHTCCEESEEEEEETTCBEEEE
T ss_pred HHHc-CCCceEEECC---ch----HHHHHhCCCCCCeEEEEcCCCeEEEc
Confidence 3322 2333322221 12 34556799999999999999999865
No 69
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.30 E-value=3.7e-06 Score=82.44 Aligned_cols=129 Identities=10% Similarity=0.023 Sum_probs=81.6
Q ss_pred ccCCCCCcccc--CCC-CceeecceecCcEEEEEEecCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEecccC--
Q 005245 322 HTKDDQLPLVE--CPT-KRKVSIDVLRRKSVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDR-- 394 (706)
Q Consensus 322 ~~k~~~~pl~d--g~~-~~kV~Is~L~gK~VlL~fSal~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~-- 394 (706)
..+....|-|. ..+ |+.|.+++++||.|+|+|-+.||++|. ++.|.++|++.+. .+++||-||+-+.
T Consensus 20 ~~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~------~g~~vv~v~~d~~~~ 93 (208)
T 2f8a_A 20 FQSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGP------RGLVVLGFPCNQFGH 93 (208)
T ss_dssp --CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTT
T ss_pred hhhcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccC------CCeEEEEEECCcccc
Confidence 34444344433 234 889999999999999999999998875 5889999999973 3599999986200
Q ss_pred CCCcChhhHHHHHHh-----hcCCCceeeccCC---CCCHHHHHHHHHhhC-------------------------CCCC
Q 005245 395 STPWTEAKEHKFEAL-----QYMMPWFSVHHPS---AIDPAVIRYAKEKWD-------------------------FRKK 441 (706)
Q Consensus 395 s~~w~D~de~~Fe~~-----~~~MPWyAVpf~~---~id~~~~r~ike~~~-------------------------~~~i 441 (706)
..+-+.++-+.|-.+ ....++-.+.-.+ ....+..+++++.+. ++..
T Consensus 94 ~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 173 (208)
T 2f8a_A 94 QENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWN 173 (208)
T ss_dssp TTCSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCST
T ss_pred cCCCCHHHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccC
Confidence 001123445566542 2233332221000 001246677776542 4556
Q ss_pred cEEEEECCCCceecc
Q 005245 442 PILVVLDPQGRVVNQ 456 (706)
Q Consensus 442 P~LVvL~pqGkv~~~ 456 (706)
|+.+++|++|+++..
T Consensus 174 p~tflID~~G~i~~~ 188 (208)
T 2f8a_A 174 FEKFLVGPDGVPLRR 188 (208)
T ss_dssp TCEEEECTTSCEEEE
T ss_pred ceEEEEcCCCcEEEE
Confidence 999999999999864
No 70
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.29 E-value=3.9e-06 Score=81.31 Aligned_cols=153 Identities=12% Similarity=0.103 Sum_probs=95.4
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.+||.|+++|.+.||++|.. +.|.+++++++. .+.++.++-|-. |+.
T Consensus 30 ~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~----~~~~~~~~~vd~--------~~~------------------- 78 (241)
T 3idv_A 30 ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKD----KDPPIPVAKIDA--------TSA------------------- 78 (241)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHT----SSSCCCEEEEET--------TTC-------------------
T ss_pred hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhh----cCCceEEEEEec--------cCC-------------------
Confidence 36899999999999999876 689999999873 234466666532 111
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecccHHHHHHHhCcccccCChhhHHHhhhhc---ccc--cccccccCC
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKEE---TWR--IDLLADSVD 496 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AFPFT~~r~eeL~~~e---~w~--lelLvd~id 496 (706)
+.+.+.|++++.|++++++ +|+.+... | +.+.+.+.+.-++. .|. .+.+..-.+
T Consensus 79 --------~~l~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 137 (241)
T 3idv_A 79 --------SVLASRFDVSGYPTIKILK-KGQAVDYE--------G----SRTQEEIVAKVREVSQPDWTPPPEVTLVLTK 137 (241)
T ss_dssp --------HHHHHHTTCCSSSEEEEEE-TTEEEECC--------S----CSCHHHHHHHHHHHHSTTCCCCCCSSEECCT
T ss_pred --------HHHHHhcCCCcCCEEEEEc-CCCccccc--------C----cccHHHHHHHHhhccCcccccccccceeccH
Confidence 1366788999999999996 57665322 2 23333333322221 121 111111011
Q ss_pred CCccccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHh---CCceeEEEeccCCc
Q 005245 497 PVIPTWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAA---GIALEMLYVGKSNP 548 (706)
Q Consensus 497 ~~I~~~i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~---~~~~E~v~Vgkdn~ 548 (706)
..+...+..++.++++|.+.+ ..|+.+.+.+.++++.. +..+.++.|..+..
T Consensus 138 ~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~ 193 (241)
T 3idv_A 138 ENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE 193 (241)
T ss_dssp TTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC
T ss_pred HHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC
Confidence 223344668899999999932 33599999999887753 33477777776644
No 71
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.28 E-value=4e-06 Score=79.25 Aligned_cols=113 Identities=16% Similarity=0.224 Sum_probs=72.3
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCC-CC-cChhhHHHHHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRS-TP-WTEAKEHKFEA 408 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s-~~-w~D~de~~Fe~ 408 (706)
..+|+.+.+++++||.|+|+|.+.||++|.. +.|.++|++++. .+++||.|++-+.. .+ =+.++-++|-+
T Consensus 36 ~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~------~~v~vv~vs~d~~~~~e~~~~~~~~~~~~ 109 (181)
T 2p31_A 36 NIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGP------HHFNVLAFPCNQFGQQEPDSNKEIESFAR 109 (181)
T ss_dssp BTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCSCHHHHHHHHH
T ss_pred cCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhc------CCEEEEEEECcCCCCCCCCCHHHHHHHHH
Confidence 3567899999999999999999999998864 789999999973 35999999862100 00 02334445543
Q ss_pred --hhcCCCcee-eccCCCCCHHHHHHHHHhhCCCCCc-------EEEEECCCCceecc
Q 005245 409 --LQYMMPWFS-VHHPSAIDPAVIRYAKEKWDFRKKP-------ILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 --~~~~MPWyA-Vpf~~~id~~~~r~ike~~~~~~iP-------~LVvL~pqGkv~~~ 456 (706)
+.-..|.++ +........+..++. +++.| ..+++|++|+++..
T Consensus 110 ~~~~~~~p~~~~~d~~g~~~~~~~~~~-----~~~~P~~~~~~~~~~lid~~G~i~~~ 162 (181)
T 2p31_A 110 RTYSVSFPMFSKIAVTGTGAHPAFKYL-----AQTSGKEPTWNFWKYLVAPDGKVVGA 162 (181)
T ss_dssp HHHCCCSCBBCCCCCSSTTSCHHHHHH-----HHHHSCCCCSTTCEEEECTTSCEEEE
T ss_pred hhcCCCceeEeecccCCccchhhhhhh-----hhcCCCccccceeEEEEcCCCCEEEE
Confidence 333344433 111110011122333 33457 89999999999864
No 72
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.28 E-value=1.1e-06 Score=86.34 Aligned_cols=104 Identities=12% Similarity=0.043 Sum_probs=75.3
Q ss_pred CCceeecceecCcEEEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhc
Q 005245 335 TKRKVSIDVLRRKSVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 411 (706)
Q Consensus 335 ~~~kV~Is~L~gK~VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~ 411 (706)
+|+.|.+++++||.|+|+|- +.||++|.. +.|.++|+++++ .+++||.|++ | +.+..+.|-+-+.
T Consensus 37 ~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~------~~v~vv~Is~-D-----~~~~~~~~~~~~~ 104 (211)
T 2pn8_A 37 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS------INTEVVACSV-D-----SQFTHLAWINTPR 104 (211)
T ss_dssp EEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT------TTEEEEEEES-S-----CHHHHHHHHTSCG
T ss_pred CCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHHhh
Confidence 45799999999999999998 999987654 789999999973 4699999986 4 2334455654331
Q ss_pred ------CCCceeeccCCCCCHHHHHHHHHhhCCC------CCcEEEEECCCCceeccc
Q 005245 412 ------MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 412 ------~MPWyAVpf~~~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~n 457 (706)
.++|..+- |. .+.+.+.|++. ..|..+++|++|+++...
T Consensus 105 ~~~g~~~~~fp~l~-----D~--~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~ 155 (211)
T 2pn8_A 105 RQGGLGPIRIPLLS-----DL--THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQIT 155 (211)
T ss_dssp GGTCCCSCSSCEEE-----CT--TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred hccCccCCceEEEE-----CC--chHHHHHcCCcccCCCcccceEEEECCCCEEEEEE
Confidence 34443332 21 13455667874 599999999999998653
No 73
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.25 E-value=2.5e-06 Score=76.79 Aligned_cols=101 Identities=15% Similarity=0.129 Sum_probs=69.7
Q ss_pred ceeecceecCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCce
Q 005245 337 RKVSIDVLRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWF 416 (706)
Q Consensus 337 ~kV~Is~L~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWy 416 (706)
+.+.+++++||.|+|+|.+.||++|.. ....++++.+ . +++++|.|++-+ +.+.-++|-.-+ .++|.
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~--~~~~l~~l~~----~-~~v~~v~v~~~~-----~~~~~~~~~~~~-~~~~~ 99 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHD--EAPLLTELGK----D-KRFQLVGINYKD-----AADNARRFLGRY-GNPFG 99 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHH--HHHHHHHHTT----C-TTSEEEEEEESC-----CHHHHHHHHHHH-CCCCS
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHH--HHHHHHHHHh----c-CCeEEEEEECCC-----CHHHHHHHHHHc-CCCCc
Confidence 789999999999999999999999865 2233344432 1 469999998622 233444554332 45665
Q ss_pred eeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 417 SVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 417 AVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
.+-... ...+.+.|++.+.|+.+++|++|+++..
T Consensus 100 ~~~~d~------~~~~~~~~~v~~~P~~~~id~~G~i~~~ 133 (156)
T 1kng_A 100 RVGVDA------NGRASIEWGVYGVPETFVVGREGTIVYK 133 (156)
T ss_dssp EEEEET------TSHHHHHTTCCSSCEEEEECTTSBEEEE
T ss_pred eeeeCc------hhHHHHhcCcCccCeEEEEcCCCCEEEE
Confidence 443321 1245677899999999999999998753
No 74
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.22 E-value=1.3e-06 Score=93.29 Aligned_cols=110 Identities=15% Similarity=0.090 Sum_probs=75.7
Q ss_pred CCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
..+|+.|.+++++||.|+|+|.+.||++|.. +.|.++|++++. .+++||.|++-+....=+.++-++|-.-
T Consensus 69 d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~------~~v~vi~Vs~d~~~~~d~~~~~~~~~~~- 141 (352)
T 2hyx_A 69 TPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD------SGLAVIGVHTPEYAFEKVPGNVAKGAAN- 141 (352)
T ss_dssp SGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEECCSSGGGGCHHHHHHHHHH-
T ss_pred CCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc------CCeEEEEEECCcccccCCHHHHHHHHHH-
Confidence 3567799999999999999999999988865 689999999963 3599999975110000012233344322
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..++|-.+-- . ...+.+.|++.+.|+++++|++|+++..
T Consensus 142 ~~l~fpv~~D-----~--~~~l~~~ygV~~~Pt~~lID~~G~Iv~~ 180 (352)
T 2hyx_A 142 LGISYPIALD-----N--NYATWTNYRNRYWPAEYLIDATGTVRHI 180 (352)
T ss_dssp HTCCSCEEEC-----T--TSHHHHHTTCCEESEEEEECTTSBEEEE
T ss_pred cCCCccEEeC-----C--cHHHHHHcCCCccCEEEEEeCCCeEEEE
Confidence 2344432221 1 1235667899999999999999999865
No 75
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.20 E-value=5e-06 Score=76.50 Aligned_cols=100 Identities=18% Similarity=0.079 Sum_probs=69.5
Q ss_pred CCceeeccee-cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhc
Q 005245 335 TKRKVSIDVL-RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 411 (706)
Q Consensus 335 ~~~kV~Is~L-~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~ 411 (706)
+|..+..+.+ +||.|+|+|.+.||++|.. +.|.+++++ +++||.|++-+ +.+...+|-.-+
T Consensus 39 ~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----------~v~vv~v~~~~-----~~~~~~~~~~~~- 102 (168)
T 2b1k_A 39 PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----------GIRVVGMNYKD-----DRQKAISWLKEL- 102 (168)
T ss_dssp TTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----------TCCEEEEEESC-----CHHHHHHHHHHH-
T ss_pred CCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----------CCEEEEEECCC-----ChHHHHHHHHHc-
Confidence 6778888885 9999999999999999865 445554432 58999998722 233444554322
Q ss_pred CCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 412 MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 412 ~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..||..+-... ...+.+.|++.+.|+.+++|++|+++..
T Consensus 103 ~~~~~~~~~d~------~~~~~~~~~v~~~P~~~lid~~G~i~~~ 141 (168)
T 2b1k_A 103 GNPYALSLFDG------DGMLGLDLGVYGAPETFLIDGNGIIRYR 141 (168)
T ss_dssp CCCCSEEEEET------TCHHHHHHTCCSSSEEEEECTTSBEEEE
T ss_pred CCCCceeeECc------chHHHHHcCccccCEEEEECCCCeEEEE
Confidence 45664322211 1235667899999999999999999853
No 76
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.20 E-value=1.2e-05 Score=79.07 Aligned_cols=117 Identities=10% Similarity=0.094 Sum_probs=75.9
Q ss_pred CC-CceeecceecCcEEEEEEecCCCChh-HHHHHHHHHHHHhhcccCCCCCeEEEEEeccc--CCCCcChhhHHHHHHh
Q 005245 334 PT-KRKVSIDVLRRKSVLLLVSDLDVSNE-ELFLLEQMYRESRQLSSRTESQYEVVWLPIVD--RSTPWTEAKEHKFEAL 409 (706)
Q Consensus 334 ~~-~~kV~Is~L~gK~VlL~fSal~~~~~-e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd--~s~~w~D~de~~Fe~~ 409 (706)
.+ |+.|++++++||.|+|+|-+.||++| +++.|.++|++.+. .+++||-||+-+ ...+-+.++-+.|-.+
T Consensus 25 ~~~G~~v~Ls~~kGKvvll~F~At~C~~c~e~p~L~~l~~~~~~------~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~ 98 (207)
T 2r37_A 25 IDGEEYIPFKQYAGKYVLFVNVASYGGLTGQYIELNALQEELAP------FGLVILGFPCNQFGKQEPGENSEILPTLKY 98 (207)
T ss_dssp TTSSCEEEGGGGTTSEEEEEEECSSSTTTTHHHHHHHHHHHHGG------GTEEEEEEECCCBTTCCCSCHHHHHHHHHH
T ss_pred CCCCCEEcHHHhCCCEEEEEEeCCCCCChHHHHHHHHHHHHhcc------CCEEEEEEECcccCcCCCCCHHHHHHHHHh
Confidence 45 88999999999999999999998876 55789999999973 359999999511 0011233445566542
Q ss_pred -----hcC--CCceeeccCC-CCCHHHHHHHHHhhC---------------------CCCCcEEEEECCCCceecc
Q 005245 410 -----QYM--MPWFSVHHPS-AIDPAVIRYAKEKWD---------------------FRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 -----~~~--MPWyAVpf~~-~id~~~~r~ike~~~---------------------~~~iP~LVvL~pqGkv~~~ 456 (706)
... .|.++-.-.+ ....+..+++++... ++..|+-+++|++|+++..
T Consensus 99 ~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~ 174 (207)
T 2r37_A 99 VRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMR 174 (207)
T ss_dssp TSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred cchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEE
Confidence 223 3433211100 001235667765432 1223789999999999864
No 77
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.19 E-value=1.1e-05 Score=80.11 Aligned_cols=117 Identities=14% Similarity=0.085 Sum_probs=76.8
Q ss_pred CC-CceeecceecCcEEEEEEecCCCChh-HHHHHHHHHHHHhhcccCCCCCeEEEEEeccc--CCCCcChhhHHHHHH-
Q 005245 334 PT-KRKVSIDVLRRKSVLLLVSDLDVSNE-ELFLLEQMYRESRQLSSRTESQYEVVWLPIVD--RSTPWTEAKEHKFEA- 408 (706)
Q Consensus 334 ~~-~~kV~Is~L~gK~VlL~fSal~~~~~-e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd--~s~~w~D~de~~Fe~- 408 (706)
.+ |+.|++++++||.|+|+|-|.||++| +.+.|.++|++.+. .+++||-||+=+ ...+-+.++-++|-+
T Consensus 43 ~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~e~p~L~~l~~~~~~------~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~ 116 (215)
T 2i3y_A 43 LNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEELKP------YGLVVLGFPCNQFGKQEPGDNKEILPGLKY 116 (215)
T ss_dssp SSSSCEEEGGGGTTSEEEEEEECSSSGGGGGHHHHHHHHHHHGG------GTEEEEEEECCCSTTCCCSCHHHHHHHHHH
T ss_pred CCCCCEEcHHHhCCCEEEEEEeCCCCCChHhHHHHHHHHHHhcc------CCeEEEEEEccccCcCCCCCHHHHHHHHHh
Confidence 45 88999999999999999999998776 56789999999973 359999999621 011223445566754
Q ss_pred ------hhcCCCceeeccCC-CCCHHHHHHHHHhhC---------------------CCCCcEEEEECCCCceecc
Q 005245 409 ------LQYMMPWFSVHHPS-AIDPAVIRYAKEKWD---------------------FRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 ------~~~~MPWyAVpf~~-~id~~~~r~ike~~~---------------------~~~iP~LVvL~pqGkv~~~ 456 (706)
+.-..|.++-.-.. ....++.+++++... ++..|+-+++|++|+++..
T Consensus 117 ~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~ 192 (215)
T 2i3y_A 117 VRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMR 192 (215)
T ss_dssp TSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEE
T ss_pred ccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEE
Confidence 22234444311100 001245677765421 1223789999999999865
No 78
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.17 E-value=1.1e-06 Score=81.27 Aligned_cols=103 Identities=12% Similarity=0.051 Sum_probs=71.8
Q ss_pred CCCCceeecceecCcEEEEEEecCC-CChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLD-VSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~-~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.+++++++||.|+|+|-+.| |++|.. +.|.++|+++ .+++||.|++ | +.+..++|-+-
T Consensus 31 ~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--------~~~~vv~is~-d-----~~~~~~~~~~~ 96 (167)
T 2jsy_A 31 TNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--------GDVNVYTISA-D-----LPFAQARWCGA 96 (167)
T ss_dssp BTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--------SSCEEEEEEC-S-----SGGGTSCCGGG
T ss_pred CCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--------CCCEEEEEEC-C-----CHHHHHHHHHh
Confidence 4678899999999999999999999 877754 7899999988 2489999986 3 12222333322
Q ss_pred hcCC-Cceeecc-CCCCCHHHHHHHHHhhCCCC------CcEEEEECCCCceeccc
Q 005245 410 QYMM-PWFSVHH-PSAIDPAVIRYAKEKWDFRK------KPILVVLDPQGRVVNQN 457 (706)
Q Consensus 410 ~~~M-PWyAVpf-~~~id~~~~r~ike~~~~~~------iP~LVvL~pqGkv~~~n 457 (706)
+ .+ +|..+.- + ...+.+.|++.. .|..+++|++|+++...
T Consensus 97 ~-~~~~~~~~~d~~-------~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~ 144 (167)
T 2jsy_A 97 N-GIDKVETLSDHR-------DMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAE 144 (167)
T ss_dssp S-SCTTEEEEEGGG-------TCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEE
T ss_pred c-CCCCceEeeCCc-------hhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEE
Confidence 2 22 3332221 1 123455678876 39999999999998654
No 79
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.14 E-value=7.7e-06 Score=78.17 Aligned_cols=103 Identities=14% Similarity=0.105 Sum_probs=74.4
Q ss_pred CC--ceeecceecCcEEEEEEe-cCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 335 TK--RKVSIDVLRRKSVLLLVS-DLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 335 ~~--~kV~Is~L~gK~VlL~fS-al~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
+| +.|.+++++||.|+|+|= +.||++|. ++.|.++|+++++ .+++||.|+. | +.+..+.|-+-
T Consensus 17 ~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~------~~v~vv~Is~-d-----~~~~~~~~~~~ 84 (186)
T 1n8j_A 17 NGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQK------LGVDVYSVST-D-----THFTHKAWHSS 84 (186)
T ss_dssp TTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH------TTEEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH------CCCEEEEEEC-C-----CHHHHHHHHHH
Confidence 46 799999999999999985 58998765 4789999999973 3599999986 4 24445667554
Q ss_pred hc---CCCceeeccCCCCCHHHHHHHHHhhCCC------CCcEEEEECCCCceecc
Q 005245 410 QY---MMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 ~~---~MPWyAVpf~~~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 456 (706)
+. .++|..+.-++ . .+.+.|++. ..|..+++|++|+++..
T Consensus 85 ~~~~~~~~fp~l~D~~---~----~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~ 133 (186)
T 1n8j_A 85 SETIAKIKYAMIGDPT---G----ALTRNFDNMREDEGLADRATFVVDPQGIIQAI 133 (186)
T ss_dssp CTTGGGCCSEEEECTT---S----HHHHHTTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred cCcccCCceeEEECCc---h----HHHHHhCCccCCCCceeeEEEEECCCCeEEEE
Confidence 42 45554443221 2 244567776 26999999999999865
No 80
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.12 E-value=2.5e-06 Score=80.42 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=69.5
Q ss_pred CCCCceeecceecCcEEEEEEecCC-CChh--HHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLD-VSNE--ELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~-~~~~--e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.+.+++++||.|+|+|-+.| |++| +++.|.++|++ + +++||.|++ | +.+..++|-+-
T Consensus 31 ~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--------~v~vv~Is~-D-----~~~~~~~~~~~ 95 (175)
T 1xvq_A 31 GGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--------GATVLCVSK-D-----LPFAQKRFCGA 95 (175)
T ss_dssp CTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--------TCEEEEEES-S-----CHHHHTTCC--
T ss_pred CCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--------CCEEEEEEC-C-----CHHHHHHHHHH
Confidence 4578899999999999999999998 6655 55789999987 2 489999986 3 12222333221
Q ss_pred hcCC-CceeeccCCCCCHHHHHHHHHhhCCCCC---------cEEEEECCCCceeccc
Q 005245 410 QYMM-PWFSVHHPSAIDPAVIRYAKEKWDFRKK---------PILVVLDPQGRVVNQN 457 (706)
Q Consensus 410 ~~~M-PWyAVpf~~~id~~~~r~ike~~~~~~i---------P~LVvL~pqGkv~~~n 457 (706)
+ .+ +|..+.-+ . +.+.+.|++... |..+++|++|+++...
T Consensus 96 ~-~~~~~~~l~D~-----~--~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 96 E-GTENVMPASAF-----R--DSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp -----CEEEEECT-----T--SSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEE
T ss_pred c-CCCCceEeeCC-----H--HHHHHHhCCcccccccCCcccceEEEECCCCeEEEEE
Confidence 1 22 33322221 1 345566788776 9999999999998654
No 81
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.11 E-value=8.1e-06 Score=75.91 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=72.4
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChh--HHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNE--ELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.|++++++||.|+|+|= +.||++| +++.|.++|++ .+++||.|+. | +.+..++|-+-
T Consensus 33 ~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---------~~~~vv~is~-d-----~~~~~~~~~~~ 97 (166)
T 3p7x_A 33 DNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---------EEGIVLTISA-D-----LPFAQKRWCAS 97 (166)
T ss_dssp CTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---------TTSEEEEEES-S-----CHHHHHHHHHH
T ss_pred cCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---------CCCEEEEEEC-C-----CHHHHHHHHHH
Confidence 4578899999999998888886 7888877 44678777765 3599999985 4 35566677654
Q ss_pred hcCC-CceeeccCCCCCHHHHHHHHHhhCCCC------CcEEEEECCCCceecc
Q 005245 410 QYMM-PWFSVHHPSAIDPAVIRYAKEKWDFRK------KPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 ~~~M-PWyAVpf~~~id~~~~r~ike~~~~~~------iP~LVvL~pqGkv~~~ 456 (706)
+ .+ +|..+--+. +. .+.+.|++.. .|..+++|++|+++..
T Consensus 98 ~-~~~~~~~l~D~~--~~----~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~ 144 (166)
T 3p7x_A 98 A-GLDNVITLSDHR--DL----SFGENYGVVMEELRLLARAVFVLDADNKVVYK 144 (166)
T ss_dssp H-TCSSCEEEECTT--TC----HHHHHHTCEETTTTEECCEEEEECTTCBEEEE
T ss_pred c-CCCceEEccCCc--hh----HHHHHhCCccccCCceeeEEEEECCCCeEEEE
Confidence 3 34 444333220 11 3455668775 8999999999999864
No 82
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.08 E-value=1.4e-05 Score=74.09 Aligned_cols=103 Identities=11% Similarity=0.063 Sum_probs=72.2
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.|++++++||.|+|+|= +.||++|.. +.|.++|+++ .+++||.|+. | +.+..+.|-+-
T Consensus 29 ~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--------~~v~vv~is~-d-----~~~~~~~~~~~ 94 (163)
T 1psq_A 29 TTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--------DNTVVLTVSM-D-----LPFAQKRWCGA 94 (163)
T ss_dssp CTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--------TTEEEEEEES-S-----CHHHHHHHHHH
T ss_pred cCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--------CCcEEEEEEC-C-----CHHHHHHHHHh
Confidence 4578899999999999999996 589877654 6788887765 3599999986 4 24445667554
Q ss_pred hcCC-Cceeecc-CCCCCHHHHHHHHHhhCCC----CC--cEEEEECCCCceeccc
Q 005245 410 QYMM-PWFSVHH-PSAIDPAVIRYAKEKWDFR----KK--PILVVLDPQGRVVNQN 457 (706)
Q Consensus 410 ~~~M-PWyAVpf-~~~id~~~~r~ike~~~~~----~i--P~LVvL~pqGkv~~~n 457 (706)
+ .. +|..+.- ++ ..+.+.|++. +. |..+++|++|+++...
T Consensus 95 ~-~~~~~~~l~D~~~-------~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 142 (163)
T 1psq_A 95 E-GLDNAIMLSDYFD-------HSFGRDYALLINEWHLLARAVFVLDTDNTIRYVE 142 (163)
T ss_dssp H-TCTTSEEEECTTT-------CHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEE
T ss_pred c-CCCCcEEecCCch-------hHHHHHhCCccccCCceEEEEEEEcCCCeEEEEE
Confidence 3 34 4433322 11 2344556776 44 9999999999998653
No 83
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.05 E-value=6.9e-06 Score=83.58 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=78.9
Q ss_pred CCCCcccc-----CCCCceeecceecCcEEEEEEe-cCCCCh--hHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCC
Q 005245 325 DDQLPLVE-----CPTKRKVSIDVLRRKSVLLLVS-DLDVSN--EELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRST 396 (706)
Q Consensus 325 ~~~~pl~d-----g~~~~kV~Is~L~gK~VlL~fS-al~~~~--~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~ 396 (706)
++..|-|. ..+|+.|++++++||.|+|+|= +.||++ .+++.|.++|+++++ .+++||.|+. |
T Consensus 65 G~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~------~gv~vv~IS~-D--- 134 (254)
T 3tjj_A 65 SKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS------INTEVVACSV-D--- 134 (254)
T ss_dssp TSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHT------TTEEEEEEES-S---
T ss_pred CCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH------cCCEEEEEcC-C---
Confidence 33445555 3357899999999999999886 888765 466789999999973 3599999985 4
Q ss_pred CcChhhHHHHHHhh------cCCCceeeccCCCCCHHHHHHHHHhhCCC------CCcEEEEECCCCceecc
Q 005245 397 PWTEAKEHKFEALQ------YMMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 397 ~w~D~de~~Fe~~~------~~MPWyAVpf~~~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~~ 456 (706)
+.++...|-+-. ..++|..+.-++ +.+.+.|++. ..|..+|+|++|++...
T Consensus 135 --~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~-------~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~ 197 (254)
T 3tjj_A 135 --SQFTHLAWINTPRRQGGLGPIRIPLLSDLT-------HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI 197 (254)
T ss_dssp --CHHHHHHHHTSCGGGTSCCSCSSCEEECTT-------SHHHHHHTCEETTTTEECEEEEEECTTSBEEEE
T ss_pred --CHHHHHHHHHHHHHhcCCcccccceeeCcH-------HHHHHHcCCccccCCCccceEEEECCCCeEEEE
Confidence 244555664422 145554443322 2445566774 47999999999999865
No 84
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.04 E-value=5.5e-06 Score=77.09 Aligned_cols=104 Identities=14% Similarity=0.170 Sum_probs=70.9
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.|++++++||.|+|+|= +.||++|.. +.|.+.|++.+ ..++++|-|+. | +.+..++|-+-
T Consensus 17 ~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~------~~~~~~v~vs~-d-----~~~~~~~~~~~ 84 (157)
T 4g2e_A 17 DTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFN------QVNAVVLGISV-D-----PPFSNKAFKEH 84 (157)
T ss_dssp BTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGG------GCSSEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhccccccccc------ccCceEeeecc-c-----chhHHHHHHHH
Confidence 4678899999999999999986 999988754 56888888876 34689999985 4 24556677542
Q ss_pred hcCCCceeeccCCCCCHHHHHHHHHhhCCC-----------CCcEEEEECCCCceecc
Q 005245 410 QYMMPWFSVHHPSAIDPAVIRYAKEKWDFR-----------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 ~~~MPWyAVpf~~~id~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~~ 456 (706)
..+||-.+--++ .+ +.+.|++. ..|+..|+|++|++...
T Consensus 85 -~~~~~p~l~D~~---~~----v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~ 134 (157)
T 4g2e_A 85 -NKLNFTILSDYN---RE----VVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYK 134 (157)
T ss_dssp -TTCCSEEEECTT---SH----HHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEE
T ss_pred -cCCcEEEEEcCC---cH----HHHHcCCccccccCCCcceeeeeEEEECCCCEEEEE
Confidence 355665443222 22 34455552 35788999999999743
No 85
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.02 E-value=1.9e-05 Score=70.62 Aligned_cols=80 Identities=9% Similarity=0.075 Sum_probs=61.7
Q ss_pred CCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhc
Q 005245 334 PTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 411 (706)
Q Consensus 334 ~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~ 411 (706)
..+.++.++.++||.|+++|.+.||++|.. +.|.+++++.+ +++.++.|.+ |++.
T Consensus 39 ~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~~-------- 95 (141)
T 3hxs_A 39 YENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYA-------GKIYIYKVNV--------DKEP-------- 95 (141)
T ss_dssp CSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTCH--------
T ss_pred cccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CceEEEEEEC--------CCCH--------
Confidence 345678888999999999999999999876 56777777764 2467777643 2211
Q ss_pred CCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 412 MMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 412 ~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|++++++++|+++.
T Consensus 96 -------------------~~~~~~~v~~~Pt~~~~~~~g~~~~ 120 (141)
T 3hxs_A 96 -------------------ELARDFGIQSIPTIWFVPMKGEPQV 120 (141)
T ss_dssp -------------------HHHHHTTCCSSSEEEEECSSSCCEE
T ss_pred -------------------HHHHHcCCCCcCEEEEEeCCCCEEE
Confidence 2567789999999999999999763
No 86
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.02 E-value=1.8e-05 Score=72.80 Aligned_cols=102 Identities=17% Similarity=0.277 Sum_probs=72.9
Q ss_pred CCCCceeecceecCc--EEEEEE-ecCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHH
Q 005245 333 CPTKRKVSIDVLRRK--SVLLLV-SDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFE 407 (706)
Q Consensus 333 g~~~~kV~Is~L~gK--~VlL~f-Sal~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe 407 (706)
..+|+.|.+++++|| .|+|+| .+.||++|. ++.|.++|+++++ .. +||.|+. | +.+..+.|-
T Consensus 20 ~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~------~~-~vv~is~-d-----~~~~~~~~~ 86 (159)
T 2a4v_A 20 NEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKE------YA-AVFGLSA-D-----SVTSQKKFQ 86 (159)
T ss_dssp CTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTT------TC-EEEEEES-C-----CHHHHHHHH
T ss_pred CCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHh------CC-cEEEEeC-C-----CHHHHHHHH
Confidence 457889999999998 788887 699988765 4789999999973 23 9999985 3 244455665
Q ss_pred HhhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCc------EEEEECCCCceecc
Q 005245 408 ALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKP------ILVVLDPQGRVVNQ 456 (706)
Q Consensus 408 ~~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP------~LVvL~pqGkv~~~ 456 (706)
+-+ .++|..+--++ ..+.+.|++...| ..+++ ++|+++..
T Consensus 87 ~~~-~~~~~~l~D~~-------~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~ 132 (159)
T 2a4v_A 87 SKQ-NLPYHLLSDPK-------REFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFK 132 (159)
T ss_dssp HHH-TCSSEEEECTT-------CHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEE
T ss_pred HHh-CCCceEEECCc-------cHHHHHhCCcccccCCccceEEEE-cCCEEEEE
Confidence 433 35554443221 2355678999888 77778 99999865
No 87
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.97 E-value=5.4e-06 Score=80.64 Aligned_cols=103 Identities=16% Similarity=0.144 Sum_probs=70.9
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChh--HHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNE--ELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.|++++++||.|+|+|= +.||++| +++.|.++|+++ .+++||.|+. | +.+..++|-+-
T Consensus 65 d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--------~~v~vv~Is~-D-----~~~~~~~~~~~ 130 (200)
T 3zrd_A 65 AKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--------ENTVVLCISS-D-----LPFAQSRFCGA 130 (200)
T ss_dssp CTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--------TTEEEEEEES-S-----CHHHHTTCTTT
T ss_pred CCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--------CCCEEEEEEC-C-----CHHHHHHHHHH
Confidence 4678899999999999999886 6787665 557899999887 2499999985 3 23333444332
Q ss_pred hcCC-CceeeccCCCCCHHHHHHHHHhhCCC-------C--CcEEEEECCCCceecc
Q 005245 410 QYMM-PWFSVHHPSAIDPAVIRYAKEKWDFR-------K--KPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 ~~~M-PWyAVpf~~~id~~~~r~ike~~~~~-------~--iP~LVvL~pqGkv~~~ 456 (706)
+ .+ +|..+.-+ . ...+.+.|++. + .|..+++|++|+++..
T Consensus 131 ~-~~~~f~~l~D~-----~-~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~ 180 (200)
T 3zrd_A 131 E-GLSNVITLSTL-----R-GADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYS 180 (200)
T ss_dssp T-TCTTEEEEETT-----S-CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred c-CCCCceEEecC-----c-hHHHHHHhCceeecccCCCccccEEEEECCCCeEEEE
Confidence 2 34 55444322 1 12344556664 3 5999999999999854
No 88
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.96 E-value=1.8e-05 Score=73.76 Aligned_cols=101 Identities=12% Similarity=0.124 Sum_probs=70.3
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.+++++++||.|+|+|= +.||++|.. +.|.++|+++ .+++||.|+. | +.+..++|-+-
T Consensus 34 ~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--------~~v~vv~Is~-d-----~~~~~~~~~~~ 99 (171)
T 2yzh_A 34 TKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--------EGVDVTVVSM-D-----LPFAQKRFCES 99 (171)
T ss_dssp ETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--------TTEEEEEEES-S-----CHHHHHHHHHH
T ss_pred CCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--------CCceEEEEeC-C-----CHHHHHHHHHH
Confidence 4578899999999999999985 899887654 6788888766 3599999986 3 23445566543
Q ss_pred hcCC-Cceeecc-CCCCCHHHHHHHHHhhCCC-------C--CcEEEEECCCCceecc
Q 005245 410 QYMM-PWFSVHH-PSAIDPAVIRYAKEKWDFR-------K--KPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 ~~~M-PWyAVpf-~~~id~~~~r~ike~~~~~-------~--iP~LVvL~pqGkv~~~ 456 (706)
+ .. +|..+.- ++ +.+ +.|++. + .|..+++|++|+++..
T Consensus 100 ~-~~~~~~~l~D~~~-------~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~ 148 (171)
T 2yzh_A 100 F-NIQNVTVASDFRY-------RDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYV 148 (171)
T ss_dssp T-TCCSSEEEECTTT-------CGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEE
T ss_pred c-CCCCeEEeecCcc-------CcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEE
Confidence 2 23 4433322 11 223 566764 2 6999999999999854
No 89
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.96 E-value=1.1e-05 Score=75.12 Aligned_cols=111 Identities=11% Similarity=0.054 Sum_probs=77.0
Q ss_pred CCCCcccc----CCCC--ceeecce-ecCcEEEEEEe-cCCCChhH---HHHHHHHHHHHhhcccCCCCCeE-EEEEecc
Q 005245 325 DDQLPLVE----CPTK--RKVSIDV-LRRKSVLLLVS-DLDVSNEE---LFLLEQMYRESRQLSSRTESQYE-VVWLPIV 392 (706)
Q Consensus 325 ~~~~pl~d----g~~~--~kV~Is~-L~gK~VlL~fS-al~~~~~e---~~~L~~iY~elk~~~~~~~~~fE-IVwIpiV 392 (706)
++..|-|. ..+| +.|++++ ++||.|+|+|= +.||++|. ++.|.+.|+++++ .+++ ||-|+.
T Consensus 7 G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~------~~v~~vv~Is~- 79 (162)
T 1tp9_A 7 GDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKS------KGVTEILCISV- 79 (162)
T ss_dssp TCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH------TTCCCEEEEES-
T ss_pred CCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEEC-
Confidence 33445544 4577 8999999 99999999998 89988776 5789999999973 3588 999985
Q ss_pred cCCCCcChhhHHHHHHhhcCC--CceeeccCCCCCHHHHHHHHHhhCCC------C-----CcEEEEECCCCceecc
Q 005245 393 DRSTPWTEAKEHKFEALQYMM--PWFSVHHPSAIDPAVIRYAKEKWDFR------K-----KPILVVLDPQGRVVNQ 456 (706)
Q Consensus 393 d~s~~w~D~de~~Fe~~~~~M--PWyAVpf~~~id~~~~r~ike~~~~~------~-----iP~LVvL~pqGkv~~~ 456 (706)
| +.+..+.|-+-+ .. ||-.+. |.. +.+.+.|++. | .|..+|+| +|++...
T Consensus 80 d-----~~~~~~~~~~~~-~~~~~~~~l~-----D~~--~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~ 142 (162)
T 1tp9_A 80 N-----DPFVMKAWAKSY-PENKHVKFLA-----DGS--ATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAA 142 (162)
T ss_dssp S-----CHHHHHHHHHTC-TTCSSEEEEE-----CTT--SHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEE
T ss_pred C-----CHHHHHHHHHhc-CCCCCeEEEE-----CCC--chHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEE
Confidence 4 234455665432 23 343222 221 3345566775 3 79999999 9999865
No 90
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.96 E-value=0.00011 Score=72.41 Aligned_cols=171 Identities=11% Similarity=0.122 Sum_probs=106.1
Q ss_pred CCc--eeecce-ecCcEEEEEEe-cCCCChhH---HHHHHHHHHHHhhcccCCCCCe-EEEEEecccCCCCcChhhHHHH
Q 005245 335 TKR--KVSIDV-LRRKSVLLLVS-DLDVSNEE---LFLLEQMYRESRQLSSRTESQY-EVVWLPIVDRSTPWTEAKEHKF 406 (706)
Q Consensus 335 ~~~--kV~Is~-L~gK~VlL~fS-al~~~~~e---~~~L~~iY~elk~~~~~~~~~f-EIVwIpiVd~s~~w~D~de~~F 406 (706)
+|+ .|++++ ++||.|+|+|= +.||++|. ++.|.+.|+++++ .++ +||-|+. | +....+.|
T Consensus 19 ~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~------~~~~~vv~is~-d-----~~~~~~~~ 86 (241)
T 1nm3_A 19 GDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKK------YGVDDILVVSV-N-----DTFVMNAW 86 (241)
T ss_dssp TTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHH------TTCCEEEEEES-S-----CHHHHHHH
T ss_pred CCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEEc-C-----CHHHHHHH
Confidence 455 899999 99999999986 99998877 6889999999974 358 9999985 4 23445566
Q ss_pred HHhhcCCC-ceeeccCCCCCHHHHHHHHHhhCCC-----------CCcEEEEECCCCceecccHHHHHHHhCcccc--cC
Q 005245 407 EALQYMMP-WFSVHHPSAIDPAVIRYAKEKWDFR-----------KKPILVVLDPQGRVVNQNALHMMWIWGSVAF--PF 472 (706)
Q Consensus 407 e~~~~~MP-WyAVpf~~~id~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AF--PF 472 (706)
-+-.. .+ |..+.-+ +.+ +.+.|++. ..|..+++ ++|++..... |.... ||
T Consensus 87 ~~~~~-~~~~~~l~D~---~~~----~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~-------~~~~~~~~~ 150 (241)
T 1nm3_A 87 KEDEK-SENISFIPDG---NGE----FTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFI-------EPNEPGDPF 150 (241)
T ss_dssp HHHTT-CTTSEEEECT---TSH----HHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEE-------CCSCSSCCC
T ss_pred HHhcC-CCceEEEECC---CcH----HHHHhCceeecccccCcccceeEEEEE-ECCEEEEEEE-------eccCCCccc
Confidence 54332 22 3222222 122 44556664 35889999 9999986532 32222 45
Q ss_pred ChhhHHHhhhhcccccccccccCCCCccccccCceEEEEEccCChhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhh
Q 005245 473 SVAREEALWKEETWRIDLLADSVDPVIPTWIMEQKHICLYGGEDLEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKA 552 (706)
Q Consensus 473 T~~r~eeL~~~e~w~lelLvd~id~~I~~~i~egK~I~LYgg~d~~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~v 552 (706)
+....+++-+. ++... + ....|-+|... || -|..+++++-++.++++|.+-|..+..++.+
T Consensus 151 ~~~~~~~il~~-----------l~~~~---i-~~~~i~ly~~~---~C-p~C~~a~~~L~~~~i~~~~~~i~~~~~~~~l 211 (241)
T 1nm3_A 151 KVSDADTMLKY-----------LAPQH---Q-VQESISIFTKP---GC-PFCAKAKQLLHDKGLSFEEIILGHDATIVSV 211 (241)
T ss_dssp SSSSHHHHHHH-----------HCTTS---C-CCCCEEEEECS---SC-HHHHHHHHHHHHHTCCCEEEETTTTCCHHHH
T ss_pred eecCHHHHHHH-----------hhhhc---c-ccceEEEEECC---CC-hHHHHHHHHHHHcCCceEEEECCCchHHHHH
Confidence 44444443321 11111 1 23457788654 55 3444555555556999999999887544443
No 91
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.90 E-value=2.7e-05 Score=72.42 Aligned_cols=104 Identities=14% Similarity=0.109 Sum_probs=70.0
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChh--HHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNE--ELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~--e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
..+|+.|.+++++||.|+|+|= +.||++| +++.|.+.|+++ .+++||.|+. | +.+..++|-+-
T Consensus 30 ~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--------~~v~vv~Is~-d-----~~~~~~~~~~~ 95 (165)
T 1q98_A 30 GNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--------SNTIVLCISA-D-----LPFAQARFCGA 95 (165)
T ss_dssp CTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--------TTEEEEEEES-S-----CHHHHTTCTTT
T ss_pred CCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--------CCCEEEEEeC-C-----CHHHHHHHHHH
Confidence 4578899999999999999985 8897765 457799999887 2599999986 3 12233334322
Q ss_pred hcCC-CceeeccCCCCCHHHHHHHHHhhCCCC---------CcEEEEECCCCceeccc
Q 005245 410 QYMM-PWFSVHHPSAIDPAVIRYAKEKWDFRK---------KPILVVLDPQGRVVNQN 457 (706)
Q Consensus 410 ~~~M-PWyAVpf~~~id~~~~r~ike~~~~~~---------iP~LVvL~pqGkv~~~n 457 (706)
..+ +|..+--+. + ..+.+.|++.. .|..+++|++|+++...
T Consensus 96 -~~~~~~~~l~D~~--~----~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 96 -EGIENAKTVSTFR--N----HALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp -TTCTTEEEEECTT--C----THHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred -cCCCceEEeeccc--c----chHHHHhCceecccccCCccceeEEEEcCCCEEEEEE
Confidence 234 443332210 1 23445567642 49999999999998653
No 92
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.82 E-value=4.7e-05 Score=66.97 Aligned_cols=75 Identities=13% Similarity=0.137 Sum_probs=56.8
Q ss_pred cceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceee
Q 005245 341 IDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSV 418 (706)
Q Consensus 341 Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAV 418 (706)
....+||.|+++|.+.||++|.. +.|.+++++.+ .++.++.|.+ |.
T Consensus 21 ~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~~----------------- 68 (126)
T 2l57_A 21 EEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-------GKFNIYYARL--------EE----------------- 68 (126)
T ss_dssp TTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-------SSCEEEEEET--------TS-----------------
T ss_pred HHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------CC-----------------
Confidence 34567999999999999999876 56777777653 4688888863 10
Q ss_pred ccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 419 HHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 419 pf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+ .-..+.+.|++++.|++++++++|+++.
T Consensus 69 ------d--~~~~~~~~~~v~~~Pt~~~~~~~G~~~~ 97 (126)
T 2l57_A 69 ------E--KNIDLAYKYDANIVPTTVFLDKEGNKFY 97 (126)
T ss_dssp ------S--HHHHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred ------C--chHHHHHHcCCcceeEEEEECCCCCEEE
Confidence 1 1124567789999999999999999864
No 93
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=97.80 E-value=2.9e-05 Score=74.34 Aligned_cols=76 Identities=14% Similarity=0.211 Sum_probs=54.8
Q ss_pred ecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCcee
Q 005245 340 SIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFS 417 (706)
Q Consensus 340 ~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyA 417 (706)
.++.++||.|+|.|+|.||+||.. |.|.+++++. .+++++.|.+ |+..+..+.+..
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~--------~~v~~~~v~~--------d~~~~~~~~~~~------ 105 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQ--------PNIELAIISK--------GRAEDDLRQRLA------ 105 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHC--------TTEEEEEECH--------HHHHHHTTTTTT------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHC--------CCcEEEEEEC--------CCCHHHHHHHHH------
Confidence 345788999999999999999876 7898888653 2488888854 433322222111
Q ss_pred eccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 418 VHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 418 Vpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
-+++++|++++++++|+++.
T Consensus 106 ------------------~~v~~iPt~i~~~~~G~~~~ 125 (167)
T 1z6n_A 106 ------------------LERIAIPLVLVLDEEFNLLG 125 (167)
T ss_dssp ------------------CSSCCSSEEEEECTTCCEEE
T ss_pred ------------------cCCCCcCeEEEECCCCCEEE
Confidence 15799999999999999864
No 94
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.79 E-value=7e-05 Score=66.50 Aligned_cols=85 Identities=7% Similarity=0.146 Sum_probs=62.7
Q ss_pred CccccCCCCceeecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHH
Q 005245 328 LPLVECPTKRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHK 405 (706)
Q Consensus 328 ~pl~dg~~~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~ 405 (706)
.|-+...++..+.....+||.|+++|.+.||++|.. +.|.+++++.+ +++.++.|.+ |+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~v~~~~vd~--------d~~~-- 86 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYG-------KRIYLLKVDL--------DKNE-- 86 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHG-------GGEEEEEEEG--------GGCH--
T ss_pred CCccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEEC--------CCCH--
Confidence 344445556666666788999999999999999876 56888887774 2477777754 2221
Q ss_pred HHHhhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 406 FEALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 406 Fe~~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++ .+|+++.
T Consensus 87 -------------------------~l~~~~~v~~~Pt~~~~-~~G~~~~ 110 (128)
T 3ul3_B 87 -------------------------SLARKFSVKSLPTIILL-KNKTMLA 110 (128)
T ss_dssp -------------------------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------------------------HHHHHcCCCCcCEEEEE-ECCEEEE
Confidence 45677899999999999 7898765
No 95
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.77 E-value=7.8e-05 Score=70.57 Aligned_cols=103 Identities=12% Similarity=0.061 Sum_probs=71.9
Q ss_pred CCCCceeeccee-cCcEEEEEE-ecCCCChh---HHHHHHHHHHHHhhcccCCCCCe-EEEEEecccCCCCcChhhHHHH
Q 005245 333 CPTKRKVSIDVL-RRKSVLLLV-SDLDVSNE---ELFLLEQMYRESRQLSSRTESQY-EVVWLPIVDRSTPWTEAKEHKF 406 (706)
Q Consensus 333 g~~~~kV~Is~L-~gK~VlL~f-Sal~~~~~---e~~~L~~iY~elk~~~~~~~~~f-EIVwIpiVd~s~~w~D~de~~F 406 (706)
..+|+.|+++++ +||.|.|+| -+.|||+| +++.|.+.|+++++ .++ +||-|+. | +.+..+.|
T Consensus 17 ~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~------~gv~~vv~Is~-d-----~~~~~~~~ 84 (167)
T 2wfc_A 17 ATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHG------KGVDIIACMAV-N-----DSFVMDAW 84 (167)
T ss_dssp SSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHH------TTCCEEEEEES-S-----CHHHHHHH
T ss_pred CCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C-----CHHHHHHH
Confidence 457889999998 999888887 59998876 55789999999974 358 9999985 3 23445566
Q ss_pred HHhhcCCC--ceeeccCCCCCHHHHHHHHHhhCCCC-----------CcEEEEECCCCceecc
Q 005245 407 EALQYMMP--WFSVHHPSAIDPAVIRYAKEKWDFRK-----------KPILVVLDPQGRVVNQ 456 (706)
Q Consensus 407 e~~~~~MP--WyAVpf~~~id~~~~r~ike~~~~~~-----------iP~LVvL~pqGkv~~~ 456 (706)
-+-. .+| |..+.-++ ..+.+.|++.. .|..+|+ ++|+++..
T Consensus 85 ~~~~-~~~~~fp~l~D~~-------~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~ 138 (167)
T 2wfc_A 85 GKAH-GADDKVQMLADPG-------GAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKV 138 (167)
T ss_dssp HHHT-TCTTTSEEEECTT-------SHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEE
T ss_pred HHhc-CCCcceEEEECCC-------CcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEE
Confidence 5432 344 43332221 23445567653 4999999 99999875
No 96
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.73 E-value=2.3e-05 Score=79.99 Aligned_cols=100 Identities=12% Similarity=0.149 Sum_probs=70.7
Q ss_pred eeec-cee--cCcE-EEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh-
Q 005245 338 KVSI-DVL--RRKS-VLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ- 410 (706)
Q Consensus 338 kV~I-s~L--~gK~-VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~- 410 (706)
+|++ +++ +||. |+++|-+.||+.|.. +.|.+.|++++. .+++||.||+ |+ ......|.+..
T Consensus 22 ~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~------~gv~VI~VS~-Ds-----~~~~~~w~~~~~ 89 (249)
T 3a2v_A 22 VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQR------LGVDLIGLSV-DS-----VFSHIKWKEWIE 89 (249)
T ss_dssp EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHH------TTEEEEEEES-SC-----HHHHHHHHHHHH
T ss_pred CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHh------CCcEEEEEEC-CC-----HHHHHHHHHHHH
Confidence 6899 998 9996 455789999887654 679999999973 3699999986 42 33444454321
Q ss_pred ----cCCCceeeccCCCCCHHHHHHHHHhhCCC-------CCcEEEEECCCCceecc
Q 005245 411 ----YMMPWFSVHHPSAIDPAVIRYAKEKWDFR-------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ----~~MPWyAVpf~~~id~~~~r~ike~~~~~-------~iP~LVvL~pqGkv~~~ 456 (706)
..++|..+--+ .+.+.+.|++. ..|.++++||+|++...
T Consensus 90 ~~~~~~i~fPil~D~-------~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~ 139 (249)
T 3a2v_A 90 RHIGVRIPFPIIADP-------QGTVARRLGLLHAESATHTVRGVFIVDARGVIRTM 139 (249)
T ss_dssp HHTCCCCCSCEEECT-------TSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE
T ss_pred HhcCCCCceeEEECC-------chHHHHHhCCccccCCCcccceEEEECCCCeEEEE
Confidence 24554433222 23455667886 89999999999998764
No 97
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=97.73 E-value=1.1e-05 Score=74.68 Aligned_cols=93 Identities=11% Similarity=0.058 Sum_probs=63.0
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChhHH--HHH---HHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEEL--FLL---EQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKF 406 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~e~--~~L---~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~F 406 (706)
...+..+..+..+||.|+|+|. +.||++|.. +.| .++.+... .+|.+|-|.+ + +..
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-------~~~~~v~vd~-~------~~~---- 95 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-------VHLHMVEVDF-P------QKN---- 95 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEEC-C------SSC----
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-------CcEEEEEecC-c------ccc----
Confidence 3345566777788999999999 999999876 456 44433332 3466666643 1 111
Q ss_pred HHhhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 407 EALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 407 e~~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
.+| ++. ......+.+.|++++.|+++++|++|+++..
T Consensus 96 -----~~~-----~~~---~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~ 132 (154)
T 2ju5_A 96 -----HQP-----EEQ---RQKNQELKAQYKVTGFPELVFIDAEGKQLAR 132 (154)
T ss_dssp -----CCC-----HHH---HHHHHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred -----CCC-----hhh---HhhHHHHHHHcCCCCCCEEEEEcCCCCEEEE
Confidence 122 221 2345677889999999999999999999864
No 98
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.73 E-value=0.00014 Score=72.36 Aligned_cols=103 Identities=9% Similarity=0.062 Sum_probs=70.7
Q ss_pred CCCceeecceecCc--EEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 334 PTKRKVSIDVLRRK--SVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 334 ~~~~kV~Is~L~gK--~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
.+| .|++++++|| .|+++|-+.||+.|.. +.|.+.|+++++ .+++||.||+ |+ .+....|-+-
T Consensus 19 ~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~------~~v~vi~IS~-D~-----~~~~~~~~~~ 85 (224)
T 1prx_A 19 TVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAK------RNVKLIALSI-DS-----VEDHLAWSKD 85 (224)
T ss_dssp TTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHT------TTEEEEEEES-SC-----HHHHHHHHHH
T ss_pred CCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH------CCCEEEEEcC-CC-----HHHHHHHHHH
Confidence 456 8999999998 5666678999887654 679999999973 4699999986 42 3334445432
Q ss_pred ----h-----cCCCceeeccCCCCCHHHHHHHHHhhCCC------------CCcEEEEECCCCceecc
Q 005245 410 ----Q-----YMMPWFSVHHPSAIDPAVIRYAKEKWDFR------------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 ----~-----~~MPWyAVpf~~~id~~~~r~ike~~~~~------------~iP~LVvL~pqGkv~~~ 456 (706)
. ..++|..+--++ +.+.+.|++. ..|..+++||+|++...
T Consensus 86 i~~~~~~~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 146 (224)
T 1prx_A 86 INAYNSEEPTEKLPFPIIDDRN-------RELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLS 146 (224)
T ss_dssp HHHHTTSCCCSCCSSCEEECTT-------CHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEE
T ss_pred HHHhhCcccccCcCcceeecCc-------hHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEE
Confidence 1 355654443221 2344556663 37999999999999764
No 99
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.71 E-value=1.6e-05 Score=74.95 Aligned_cols=104 Identities=12% Similarity=0.123 Sum_probs=73.2
Q ss_pred CCCCceeeccee--cCcEEEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHH
Q 005245 333 CPTKRKVSIDVL--RRKSVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFE 407 (706)
Q Consensus 333 g~~~~kV~Is~L--~gK~VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe 407 (706)
..+|+.|+++++ +||.|.|+|= +.|||+|.. +.|.+.|+++++ .++++|-|+. | +.+..++|-
T Consensus 18 ~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~------~~v~vv~is~-d-----~~~~~~~~~ 85 (164)
T 4gqc_A 18 NQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEK------ANAEVLAISV-D-----SPWCLKKFK 85 (164)
T ss_dssp BTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGG------SSSEEEEEES-S-----CHHHHHHHH
T ss_pred CCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhc------cCceEEEecC-C-----CHHHHHHHH
Confidence 467889999998 8998888876 889988754 578899998863 4589999985 4 244556775
Q ss_pred HhhcCCCceeeccCCCCCHHHHHHHHHhhCCC----------CCcEEEEECCCCceecc
Q 005245 408 ALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFR----------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 408 ~~~~~MPWyAVpf~~~id~~~~r~ike~~~~~----------~iP~LVvL~pqGkv~~~ 456 (706)
+- ..+||-.+--++ . .+.+.|++. ..|...|+|++|++...
T Consensus 86 ~~-~~~~fp~l~D~~---~----~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~ 136 (164)
T 4gqc_A 86 DE-NRLAFNLLSDYN---R----EVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYK 136 (164)
T ss_dssp HH-TTCCSEEEECTT---S----HHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEE
T ss_pred Hh-cCcccceeecCc---h----HHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEE
Confidence 43 345544433222 2 344556663 36889999999999754
No 100
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.70 E-value=8e-05 Score=74.92 Aligned_cols=103 Identities=11% Similarity=0.059 Sum_probs=71.2
Q ss_pred CCCceeecceecCc-EEEEEE-ecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 334 PTKRKVSIDVLRRK-SVLLLV-SDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 334 ~~~~kV~Is~L~gK-~VlL~f-Sal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
.+| .|++++++|| .|+|+| .+.||+.|.. +.|.+.|+++++ .+++||.||+ |+ ....+.|-+-
T Consensus 17 ~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~------~~v~vigIS~-D~-----~~~~~~~~~~ 83 (233)
T 2v2g_A 17 TIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKK------RGVKLIALSC-DN-----VADHKEWSED 83 (233)
T ss_dssp TTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHH------TTEEEEEEES-SC-----HHHHHHHHHH
T ss_pred CCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH------cCCEEEEEcC-CC-----HHHHHHHHHH
Confidence 456 8999999998 777777 5889877654 679999999973 3599999986 42 3344455442
Q ss_pred -----hc--CCCceeeccCCCCCHHHHHHHHHhhCCC------------CCcEEEEECCCCceecc
Q 005245 410 -----QY--MMPWFSVHHPSAIDPAVIRYAKEKWDFR------------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 410 -----~~--~MPWyAVpf~~~id~~~~r~ike~~~~~------------~iP~LVvL~pqGkv~~~ 456 (706)
.. .++|.-+--++ +.+.+.|++. ..|..+|+||+|++...
T Consensus 84 i~~~~~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~ 142 (233)
T 2v2g_A 84 VKCLSGVKGDMPYPIIADET-------RELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLS 142 (233)
T ss_dssp HHHHHTCCSSCSSCEEECTT-------CHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEE
T ss_pred HHHhhCcccCCceEEEECCh-------HHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEE
Confidence 12 55554433221 2344556763 47999999999999754
No 101
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.69 E-value=1.7e-05 Score=73.79 Aligned_cols=99 Identities=13% Similarity=0.133 Sum_probs=59.5
Q ss_pred ceecCcEEEEEEecCCCChhHHH---HH--HHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCce
Q 005245 342 DVLRRKSVLLLVSDLDVSNEELF---LL--EQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWF 416 (706)
Q Consensus 342 s~L~gK~VlL~fSal~~~~~e~~---~L--~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWy 416 (706)
...+||.|+|.|.|.||++|... .| .++.+.++ ++|.+|-|.+ |. +.+......+.....+.
T Consensus 43 a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~-------~~~~~v~v~~-d~-----~~~~~~~~~~~~~~~~~ 109 (172)
T 3f9u_A 43 ARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIIN-------NDYVLITLYV-DN-----KTPLTEPVKIMENGTER 109 (172)
T ss_dssp HHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEET-TC-----CCEEEEEEEEEETTEEE
T ss_pred HHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-------CCEEEEEEec-Cc-----ccccchhhhhhhcchhh
Confidence 34569999999999999999762 11 44444443 1488888865 21 00000001112233333
Q ss_pred eeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 417 SVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 417 AVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
.++... ........+.|++.++|+++++|++|+++..
T Consensus 110 ~~~~~~---~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~ 146 (172)
T 3f9u_A 110 TLRTVG---DKWSYLQRVKFGANAQPFYVLIDNEGNPLNK 146 (172)
T ss_dssp EEEEHH---HHHHHHHHHHHSCCCSSEEEEECTTSCBSSC
T ss_pred hhhhhh---hhhhHHHHHHcCCCCcceEEEECCCCCEEee
Confidence 333311 1222333588999999999999999999864
No 102
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.68 E-value=8.8e-05 Score=73.55 Aligned_cols=102 Identities=11% Similarity=0.056 Sum_probs=69.7
Q ss_pred CCceeecceecCc--EEEEEEecCCCChhH--HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHH--
Q 005245 335 TKRKVSIDVLRRK--SVLLLVSDLDVSNEE--LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA-- 408 (706)
Q Consensus 335 ~~~kV~Is~L~gK--~VlL~fSal~~~~~e--~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~-- 408 (706)
+| .|++++++|| .|+++|-+.||+.|. ++.|.+.|+++++ .+++||.||+ |+ ....+.|-+
T Consensus 20 ~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~------~~v~vi~vS~-D~-----~~~~~~~~~~i 86 (220)
T 1xcc_A 20 DG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLK------LNCKLIGFSC-NS-----KESHDKWIEDI 86 (220)
T ss_dssp SS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHT------TTEEEEEEES-SC-----HHHHHHHHHHH
T ss_pred CC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH------cCCEEEEEeC-CC-----HHHHHHHHHHH
Confidence 56 8999999998 444455889987765 4679999999973 4699999986 42 334455543
Q ss_pred --h--hcCCCceeeccCCCCCHHHHHHHHHhhCCC------------CCcEEEEECCCCceecc
Q 005245 409 --L--QYMMPWFSVHHPSAIDPAVIRYAKEKWDFR------------KKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 409 --~--~~~MPWyAVpf~~~id~~~~r~ike~~~~~------------~iP~LVvL~pqGkv~~~ 456 (706)
+ ...++|..+--++ +.+.+.|++. ..|..+|+||+|++...
T Consensus 87 ~~~~~~~~~~fpil~D~~-------~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~ 143 (220)
T 1xcc_A 87 KYYGKLNKWEIPIVCDES-------RELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKAT 143 (220)
T ss_dssp HHHHTCSCCCCCEEECTT-------SHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEE
T ss_pred HHHhcCCCCcceeEECch-------hHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEE
Confidence 1 2455554433221 2344556762 37999999999999764
No 103
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.62 E-value=8.4e-05 Score=66.78 Aligned_cols=78 Identities=14% Similarity=0.066 Sum_probs=57.0
Q ss_pred eeecceecCcEEEEEEecCCCChhHHH--HH---HHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcC
Q 005245 338 KVSIDVLRRKSVLLLVSDLDVSNEELF--LL---EQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYM 412 (706)
Q Consensus 338 kV~Is~L~gK~VlL~fSal~~~~~e~~--~L---~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~ 412 (706)
+..++..+||.|+|+|.+.||++|... .+ .+++++.+ ++.++.|.+ |..
T Consensus 23 ~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--------~~~~~~vd~--------~~~---------- 76 (134)
T 2fwh_A 23 NQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--------DTVLLQANV--------TAN---------- 76 (134)
T ss_dssp HHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--------TSEEEEEEC--------TTC----------
T ss_pred HHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--------CcEEEEEeC--------CCC----------
Confidence 456667789999999999999999763 34 45554442 377777754 111
Q ss_pred CCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 413 MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 413 MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
. .....+.+.|++.+.|+++++|++|+++
T Consensus 77 ---------~----~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 77 ---------D----AQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp ---------C----HHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred ---------c----chHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 0 1234567788999999999999999987
No 104
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.61 E-value=5.5e-05 Score=67.12 Aligned_cols=74 Identities=16% Similarity=0.131 Sum_probs=56.2
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHH--HHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeec
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLE--QMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 419 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~--~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVp 419 (706)
.+||.|+|+|.+.||++|.. +.|. ++.++++ +++.++.|.+ +.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~-------~~~~~~~vd~--------~~------------------ 73 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIA-------KHFEVVKIDV--------GN------------------ 73 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHH-------HHCEEEEEEC--------TT------------------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhc-------CCEEEEEEeC--------Cc------------------
Confidence 45999999999999999876 5677 7777764 2488888865 11
Q ss_pred cCCCCCHHHHHHHHHhhCC---CCCcEEEEECCCCceecc
Q 005245 420 HPSAIDPAVIRYAKEKWDF---RKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 420 f~~~id~~~~r~ike~~~~---~~iP~LVvL~pqGkv~~~ 456 (706)
. + ....+.+.|++ ++.|+++++|++|+++..
T Consensus 74 ~-~-----~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~ 107 (133)
T 3fk8_A 74 F-D-----RNLELSQAYGDPIQDGIPAVVVVNSDGKVRYT 107 (133)
T ss_dssp T-T-----SSHHHHHHTTCGGGGCSSEEEEECTTSCEEEE
T ss_pred c-c-----chHHHHHHhCCccCCccceEEEECCCCCEEEE
Confidence 1 1 12236677899 999999999999998854
No 105
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.45 E-value=0.00032 Score=62.92 Aligned_cols=68 Identities=12% Similarity=0.145 Sum_probs=51.6
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.|.+++++.+ +++.++-|.+ |++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--------~~~-------------------- 81 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYD-------GQIVIYKVDT--------EKE-------------------- 81 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCEEEEEEeC--------CCC--------------------
Confidence 4789999999999999876 56777777663 2466666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
..+.+.|++++.|+++++|++|+++
T Consensus 82 -------~~l~~~~~v~~~Pt~~~~~~~G~~~ 106 (136)
T 2l5l_A 82 -------QELAGAFGIRSIPSILFIPMEGKPE 106 (136)
T ss_dssp -------HHHHHHTTCCSSCEEEEECSSSCCE
T ss_pred -------HHHHHHcCCCCCCEEEEECCCCcEE
Confidence 1355678999999999999999986
No 106
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.32 E-value=0.00021 Score=69.18 Aligned_cols=129 Identities=10% Similarity=0.026 Sum_probs=79.6
Q ss_pred CCCCCccccCC----CC-ceeecce-ecCcEEE-EEEecCCCChhH---HHHHHHHHHHHhhcccCCCCCeE-EEEEecc
Q 005245 324 KDDQLPLVECP----TK-RKVSIDV-LRRKSVL-LLVSDLDVSNEE---LFLLEQMYRESRQLSSRTESQYE-VVWLPIV 392 (706)
Q Consensus 324 k~~~~pl~dg~----~~-~kV~Is~-L~gK~Vl-L~fSal~~~~~e---~~~L~~iY~elk~~~~~~~~~fE-IVwIpiV 392 (706)
-++..|-|.-. +| +.|++++ ++||.|. ++|=+.|||+|. ++.|.+.|+++++ .+++ ||-|+.
T Consensus 28 vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~------~gv~~vv~Is~- 100 (184)
T 3uma_A 28 VGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILA------RGVDDIAVVAV- 100 (184)
T ss_dssp TTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHT------TTCCEEEEEES-
T ss_pred CCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHH------cCCCEEEEEEC-
Confidence 34445555432 56 8999999 8999654 456699998874 5789999999973 3488 999986
Q ss_pred cCCCCcChhhHHHHHHhhcCCC--ceeeccCCCCCHHHHHHHHHhhCCC-----------CCcEEEEECCCCceecccHH
Q 005245 393 DRSTPWTEAKEHKFEALQYMMP--WFSVHHPSAIDPAVIRYAKEKWDFR-----------KKPILVVLDPQGRVVNQNAL 459 (706)
Q Consensus 393 d~s~~w~D~de~~Fe~~~~~MP--WyAVpf~~~id~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~~nA~ 459 (706)
| +....++|-+-. ..| |--+.-++ ..+.+.|++. ..|..+|++ +|+|.....
T Consensus 101 d-----~~~~~~~f~~~~-~~~~~fp~l~D~~-------~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~~- 165 (184)
T 3uma_A 101 N-----DLHVMGAWATHS-GGMGKIHFLSDWN-------AAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALNI- 165 (184)
T ss_dssp S-----CHHHHHHHHHHH-TCTTTSEEEECTT-------CHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEEE-
T ss_pred C-----CHHHHHHHHHHh-CCCCceEEEEcCc-------hHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEEE-
Confidence 3 234456665432 233 33332221 2344556764 357788886 999976442
Q ss_pred HHHHHhCcccccCChhhHHHh
Q 005245 460 HMMWIWGSVAFPFSVAREEAL 480 (706)
Q Consensus 460 ~mI~~wG~~AFPFT~~r~eeL 480 (706)
|.+.=+++.+..+++
T Consensus 166 ------~~~~g~~~~~~~~~v 180 (184)
T 3uma_A 166 ------EESPGQATASGAAAM 180 (184)
T ss_dssp ------CSSTTCCSTTSHHHH
T ss_pred ------eCCCCCCcCCCHHHH
Confidence 333335555555444
No 107
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.29 E-value=0.00039 Score=60.05 Aligned_cols=68 Identities=21% Similarity=0.263 Sum_probs=52.8
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.+++++.+ +++.++.|.+ |++ +
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~--------~~~------------------~- 61 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMG-------DKLKIVKIDV--------DEN------------------Q- 61 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHT-------TTCEEEEEET--------TTC------------------C-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCcEEEEEEC--------CCC------------------H-
Confidence 7899999999999998875 57888887774 2578888754 211 1
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++ ++|+++.
T Consensus 62 --------~l~~~~~v~~~Pt~~~~-~~G~~~~ 85 (112)
T 2voc_A 62 --------ETAGKYGVMSIPTLLVL-KDGEVVE 85 (112)
T ss_dssp --------SHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCcccEEEEE-eCCEEEE
Confidence 14567899999999999 9999874
No 108
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.28 E-value=0.00043 Score=66.31 Aligned_cols=104 Identities=14% Similarity=0.075 Sum_probs=69.3
Q ss_pred CCCCceeecce-ecCcEEEEEE-ecCCCChhH---HHHHHHHHHHHhhcccCCCCCeEEEE-EecccCCCCcChhhHHHH
Q 005245 333 CPTKRKVSIDV-LRRKSVLLLV-SDLDVSNEE---LFLLEQMYRESRQLSSRTESQYEVVW-LPIVDRSTPWTEAKEHKF 406 (706)
Q Consensus 333 g~~~~kV~Is~-L~gK~VlL~f-Sal~~~~~e---~~~L~~iY~elk~~~~~~~~~fEIVw-IpiVd~s~~w~D~de~~F 406 (706)
..+|+.|.+++ ++||.|.|+| =+.|||+|. ++.|.+.|+++++ .+++||. |+. | +....++|
T Consensus 29 ~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~------~gv~vv~~iS~-D-----~~~~~~~f 96 (173)
T 3mng_A 29 GEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKA------KGVQVVACLSV-N-----DAFVTGEW 96 (173)
T ss_dssp SSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHT------TTCCEEEEEES-S-----CHHHHHHH
T ss_pred CCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHh------CCCEEEEEEcC-C-----CHHHHHHH
Confidence 45788999999 5999766655 599998887 4789999999973 3599998 875 3 23445566
Q ss_pred HHhhcCCC--ceeeccCCCCCHHHHHHHHHhhCCC-------------CCcEEEEECCCCceeccc
Q 005245 407 EALQYMMP--WFSVHHPSAIDPAVIRYAKEKWDFR-------------KKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 407 e~~~~~MP--WyAVpf~~~id~~~~r~ike~~~~~-------------~iP~LVvL~pqGkv~~~n 457 (706)
-+-.. .| +..+--++ . .+.+.|++. ..|...|+| +|++....
T Consensus 97 ~~~~~-~~~~fp~l~D~~---~----~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~ 153 (173)
T 3mng_A 97 GRAHK-AEGKVRLLADPT---G----AFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALN 153 (173)
T ss_dssp HHHTT-CTTTCEEEECTT---C----HHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred HHHhC-CCCceEEEECCC---h----HHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEE
Confidence 54322 22 32222221 2 333445553 459999999 99997653
No 109
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.26 E-value=0.00067 Score=57.03 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=50.4
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.||.|+++|.+.||++|.. +.|.++.++.+ +++.++.|.+ |++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~~~-------------------- 60 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHA-------DKVTVAKLNV--------DEN-------------------- 60 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHST-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--------cCC--------------------
Confidence 4789999999999999876 45666666553 3477777754 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 61 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 85 (105)
T 1nsw_A 61 -------PETTSQFGIMSIPTLILF-KGGRPVK 85 (105)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCccccEEEEE-eCCeEEE
Confidence 125567899999999999 8998764
No 110
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.26 E-value=0.00076 Score=67.98 Aligned_cols=115 Identities=17% Similarity=0.163 Sum_probs=79.7
Q ss_pred CCcccc------CCCCceeecceecCcEEEEEEe-cCC--CChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCC
Q 005245 327 QLPLVE------CPTKRKVSIDVLRRKSVLLLVS-DLD--VSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTP 397 (706)
Q Consensus 327 ~~pl~d------g~~~~kV~Is~L~gK~VlL~fS-al~--~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~ 397 (706)
.-|-|. ..++.+|++++++||.|.|||= +.+ .|+.|+..+.+.|+++++ .+.+||-||. |
T Consensus 31 ~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~------~g~~vigiS~-D---- 99 (219)
T 3tue_A 31 PAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNE------LNCEVLACSI-D---- 99 (219)
T ss_dssp BCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHT------TTEEEEEEES-S----
T ss_pred cCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhcc------CCcEEEEeeC-C----
Confidence 456664 3467899999999999999998 444 445666789999999973 4699999986 4
Q ss_pred cChhhHHHHHH-hhcCCCceeeccCCCCCHHHHHHHHHhhCC----CCC--cEEEEECCCCceec
Q 005245 398 WTEAKEHKFEA-LQYMMPWFSVHHPSAIDPAVIRYAKEKWDF----RKK--PILVVLDPQGRVVN 455 (706)
Q Consensus 398 w~D~de~~Fe~-~~~~MPWyAVpf~~~id~~~~r~ike~~~~----~~i--P~LVvL~pqGkv~~ 455 (706)
+-...+.|.+ ...+..-+.+|||-+-|. -+.+.+.|++ .+. -...|+||+|++..
T Consensus 100 -s~~sh~~w~~~~~~~~~~~~l~fpllsD~--~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~ 161 (219)
T 3tue_A 100 -SEYAHLQWTLQDRKKGGLGTMAIPILADK--TKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQ 161 (219)
T ss_dssp -CHHHHHHHHHSCGGGTCCCSCSSCEEECT--TSHHHHHTTCEETTTTEECEEEEEECTTSBEEE
T ss_pred -chhhHHHHhhhhHHhcCccccccccccCc--ccHHHHHcCCcccCCCeeEEEEEEECCCCeEEE
Confidence 2556677753 445555666777533232 2345555665 233 37899999998853
No 111
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.23 E-value=0.00088 Score=56.11 Aligned_cols=68 Identities=15% Similarity=0.261 Sum_probs=51.5
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.+++++.+ +++.++.|.+ |++.
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~~------------------- 63 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYE-------GKADILKLDV--------DENP------------------- 63 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTCH-------------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCcEEEEEEC--------CcCH-------------------
Confidence 8999999999999999876 56777777764 2477777754 2211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|++++++ +|+.+.
T Consensus 64 --------~~~~~~~v~~~Pt~~~~~-~G~~~~ 87 (106)
T 3die_A 64 --------STAAKYEVMSIPTLIVFK-DGQPVD 87 (106)
T ss_dssp --------HHHHHTTCCSBSEEEEEE-TTEEEE
T ss_pred --------HHHHhCCCcccCEEEEEe-CCeEEE
Confidence 245678999999999995 898764
No 112
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.22 E-value=0.0011 Score=56.39 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=51.3
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.++.++.+ +++.++.|.+ |.+.
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--------~~~~------------------- 69 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYS-------DRLKVVKLEI--------DPNP------------------- 69 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEES--------TTCH-------------------
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhC-------CcEEEEEEEc--------CCCH-------------------
Confidence 5899999999999999876 45666665553 3488888854 2211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++ ++|+++.
T Consensus 70 --------~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (115)
T 1thx_A 70 --------TTVKKYKVEGVPALRLV-KGEQILD 93 (115)
T ss_dssp --------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCceeEEEEE-cCCEEEE
Confidence 25567899999999999 8999874
No 113
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.20 E-value=0.00076 Score=57.00 Aligned_cols=68 Identities=19% Similarity=0.276 Sum_probs=50.1
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.||.|+++|.+.||++|.. +.|.++.++.+ +++.++.|.+ |++ +
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~------------------~- 64 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------------------P- 64 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--------TTC------------------T-
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CCcEEEEEEC--------CCC------------------H-
Confidence 4799999999999999876 46777666653 2467766643 211 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++ ++|+++.
T Consensus 65 --------~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (108)
T 2trx_A 65 --------GTAPKYGIRGIPTLLLF-KNGEVAA 88 (108)
T ss_dssp --------THHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCcccCEEEEE-eCCEEEE
Confidence 14567899999999999 8999864
No 114
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.20 E-value=0.00041 Score=60.91 Aligned_cols=78 Identities=10% Similarity=0.075 Sum_probs=52.1
Q ss_pred eeecceecCcEEEEEEecCCCChhHH--HHH---HHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcC
Q 005245 338 KVSIDVLRRKSVLLLVSDLDVSNEEL--FLL---EQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYM 412 (706)
Q Consensus 338 kV~Is~L~gK~VlL~fSal~~~~~e~--~~L---~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~ 412 (706)
.+..+..+||.|+++|.+.||++|.. +.| ..+-+.++ .++.++-|-+ |.
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~----------- 72 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFN-------RHFVNLKMDM--------EK----------- 72 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHH-------HHSEEEEECS--------SS-----------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHh-------cCeEEEEEec--------CC-----------
Confidence 44455568999999999999999876 334 33333332 2344444421 11
Q ss_pred CCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 413 MPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 413 MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+ ....+.+.|++++.|+++++|++|+++.
T Consensus 73 ---------~-----~~~~~~~~~~v~~~Pt~~~~d~~G~~~~ 101 (130)
T 2kuc_A 73 ---------G-----EGVELRKKYGVHAYPTLLFINSSGEVVY 101 (130)
T ss_dssp ---------T-----THHHHHHHTTCCSSCEEEEECTTSCEEE
T ss_pred ---------c-----chHHHHHHcCCCCCCEEEEECCCCcEEE
Confidence 1 1234567789999999999999999875
No 115
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.17 E-value=0.00033 Score=63.20 Aligned_cols=73 Identities=10% Similarity=0.201 Sum_probs=51.1
Q ss_pred cceecCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeecc
Q 005245 341 IDVLRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHH 420 (706)
Q Consensus 341 Is~L~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf 420 (706)
++..+||.|+++|.+.||++|.. +...++++.+ .|.|+++.+ | .++
T Consensus 35 l~~~~~k~vvv~F~a~wC~~C~~--~~p~l~~l~~-------~~~v~~~~v-d-------~~~----------------- 80 (133)
T 3cxg_A 35 FSSTQNSSIVIKFGAVWCKPCNK--IKEYFKNQLN-------YYYVTLVDI-D-------VDI----------------- 80 (133)
T ss_dssp HTC-CCSEEEEEEECTTCHHHHH--THHHHHGGGG-------TEECEEEEE-E-------TTT-----------------
T ss_pred HHhcCCCEEEEEEECCCCHHHHH--HHHHHHHHHH-------hcCEEEEEE-e-------ccc-----------------
Confidence 45567899999999999999986 4556666652 356777765 2 111
Q ss_pred CCCCCHHHHHHHHHhhCCCCCcEEEEE-CCCCc--eec
Q 005245 421 PSAIDPAVIRYAKEKWDFRKKPILVVL-DPQGR--VVN 455 (706)
Q Consensus 421 ~~~id~~~~r~ike~~~~~~iP~LVvL-~pqGk--v~~ 455 (706)
...+.+.|++++.|+++++ +++|+ ++.
T Consensus 81 --------~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~ 110 (133)
T 3cxg_A 81 --------HPKLNDQHNIKALPTFEFYFNLNNEWVLVH 110 (133)
T ss_dssp --------CHHHHHHTTCCSSSEEEEEEEETTEEEEEE
T ss_pred --------hHHHHHhcCCCCCCEEEEEEecCCCeEEEE
Confidence 1235677899999999999 55665 553
No 116
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.0009 Score=57.22 Aligned_cols=69 Identities=12% Similarity=0.227 Sum_probs=48.4
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.+++++++ ..++.++.|.+ |++
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~------~~~~~~~~vd~--------~~~-------------------- 65 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPS------NSNVSFLSIDA--------DEN-------------------- 65 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGG------GTTSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcC------CCCEEEEEEec--------ccC--------------------
Confidence 3789999999999999876 45666666653 13477777643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ .+|+++.
T Consensus 66 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 90 (112)
T 3d6i_A 66 -------SEISELFEISAVPYFIII-HKGTILK 90 (112)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-ECCEEEE
Confidence 135677899999999998 6998875
No 117
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.15 E-value=0.0012 Score=55.14 Aligned_cols=68 Identities=15% Similarity=0.201 Sum_probs=50.5
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.++++|.+.||++|.. +.|.++.+++. +++.++.|.+ |.+
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 61 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYE-------GKLLVAKLDV--------DEN-------------------- 61 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh-------CceEEEEEEC--------CCC--------------------
Confidence 4799999999999999876 45777666653 2477776643 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++.+.|+++++ ++|+++.
T Consensus 62 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (109)
T 2yzu_A 62 -------PKTAMRYRVMSIPTVILF-KDGQPVE 86 (109)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HhHHHhCCCCcCCEEEEE-eCCcEee
Confidence 125667899999999999 8999874
No 118
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.13 E-value=0.0012 Score=55.37 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=51.1
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.|.++.++.+ +++.++.|.+ |++
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 63 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFA-------GKVTVAKVNI--------DDN-------------------- 63 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TSEEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhC-------CcEEEEEEEC--------CCC--------------------
Confidence 4799999999999999876 45777776663 2577777754 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 64 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 2i4a_A 64 -------PETPNAYQVRSIPTLMLV-RDGKVID 88 (107)
T ss_dssp -------CHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCCCccCEEEEE-eCCEEEE
Confidence 025567899999999999 9999864
No 119
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.13 E-value=0.0011 Score=56.46 Aligned_cols=68 Identities=24% Similarity=0.178 Sum_probs=50.5
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.||.|+++|.+.||++|.. +.|.+++++.+ +++.++.|.+ |++
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 66 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYG-------DKIEIVKLNI--------DEN-------------------- 66 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhc-------CCeEEEEEEc--------CCC--------------------
Confidence 3789999999999999876 56777776653 3477777754 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 67 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 91 (112)
T 1t00_A 67 -------PGTAAKYGVMSIPTLNVY-QGGEVAK 91 (112)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCEEEE
Confidence 125567899999999888 7998863
No 120
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.12 E-value=0.0015 Score=55.07 Aligned_cols=68 Identities=13% Similarity=0.193 Sum_probs=50.0
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.||.|+++|.+.||++|.. +.|.+++++.+ +++.++.|.+ |++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 62 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYK-------DKLKCVKLNT--------DES-------------------- 62 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CceEEEEEEC--------CCC--------------------
Confidence 3789999999999999876 56777776653 2477777743 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 87 (107)
T 1dby_A 63 -------PNVASEYGIRSIPTIMVF-KGGKKCE 87 (107)
T ss_dssp -------HHHHHHHTCCSSCEEEEE-SSSSEEE
T ss_pred -------HHHHHHCCCCcCCEEEEE-eCCEEEE
Confidence 135567899999999888 7998864
No 121
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.10 E-value=0.0012 Score=55.25 Aligned_cols=69 Identities=14% Similarity=0.104 Sum_probs=49.8
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.+||.|+++|.+.||++|.. +.|.++.++.+ .++.++.|.+ |+.
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--------~~~------------------- 63 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFA-------DNVVVLKVDV--------DEC------------------- 63 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--------TTC-------------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-------CCeEEEEEec--------cch-------------------
Confidence 46899999999999999876 45666665542 3577777753 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 64 --------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (106)
T 1xwb_A 64 --------EDIAMEYNISSMPTFVFL-KNGVKVE 88 (106)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHHcCCCcccEEEEE-cCCcEEE
Confidence 125567899999998777 6898764
No 122
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.08 E-value=0.0013 Score=57.42 Aligned_cols=68 Identities=13% Similarity=0.185 Sum_probs=50.9
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.||.|+|+|.+.||++|.. +.|.+++++.+ +++.++.|.+ |++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~--------d~~-------------------- 74 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQH-------GKVVMAKVDI--------DDH-------------------- 74 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TSSEEEEEET--------TTT--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------CCC--------------------
Confidence 4789999999999999876 45777766653 3577777743 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 75 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 99 (119)
T 1w4v_A 75 -------TDLAIEYEVSAVPTVLAM-KNGDVVD 99 (119)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCcEEE
Confidence 135677899999999999 8999864
No 123
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.06 E-value=0.0011 Score=57.72 Aligned_cols=72 Identities=7% Similarity=0.182 Sum_probs=51.7
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.||.|+++|.+.||++|.. +.|.+++++.+ .+|+++-+ + ...+
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~---------~~v~~~~~-~-----~~~~-------------------- 72 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK---------AHIYFINS-E-----EPSQ-------------------- 72 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC---------CCCEEEET-T-----CGGG--------------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC---------CeEEEEEC-C-----CcCc--------------------
Confidence 4789999999999999876 56887777653 35777754 1 0111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
....+.+.+.|++++.|+++++. +|+++.
T Consensus 73 ---~~~~~~~~~~~~i~~~Pt~~~~~-~G~~~~ 101 (118)
T 1zma_A 73 ---LNDLQAFRSRYGIPTVPGFVHIT-DGQINV 101 (118)
T ss_dssp ---HHHHHHHHHHHTCCSSCEEEEEE-TTEEEE
T ss_pred ---HHHHHHHHHHcCCCCCCeEEEEE-CCEEEE
Confidence 12344567788999999999995 888763
No 124
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.05 E-value=0.0013 Score=57.61 Aligned_cols=71 Identities=7% Similarity=0.054 Sum_probs=51.5
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.|.+++++++.. ...++.++.|.+ |++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~~~~~vd~--------~~~-------------------- 72 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQ---TKGKVKLAAVDA--------TVN-------------------- 72 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHH---TTTSEEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhh---cCCcEEEEEEEC--------CCC--------------------
Confidence 3789999999999999875 5788888887531 224566666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
+.+.+.|++++.|+++++++ |+.+
T Consensus 73 -------~~l~~~~~v~~~Pt~~~~~~-g~~~ 96 (133)
T 1x5d_A 73 -------QVLASRYGIRGFPTIKIFQK-GESP 96 (133)
T ss_dssp -------CHHHHHHTCCSSSEEEEEET-TEEE
T ss_pred -------HHHHHhCCCCeeCeEEEEeC-CCce
Confidence 23556789999999999998 7754
No 125
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.04 E-value=0.0014 Score=56.56 Aligned_cols=67 Identities=15% Similarity=0.177 Sum_probs=48.8
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.+++++.+ ++.++-|.+ |+.
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--------~~~~~~vd~--------~~~-------------------- 66 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--------QADFYKLDV--------DEL-------------------- 66 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CCC--------------------
Confidence 4899999999999999876 45666666542 356666533 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|++++++ +|+.+.
T Consensus 67 -------~~l~~~~~v~~~Pt~~~~~-~G~~~~ 91 (109)
T 3f3q_A 67 -------GDVAQKNEVSAMPTLLLFK-NGKEVA 91 (109)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCCccCEEEEEE-CCEEEE
Confidence 2356778999999999998 898764
No 126
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.02 E-value=0.0011 Score=58.10 Aligned_cols=68 Identities=6% Similarity=-0.028 Sum_probs=50.2
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
++++ |+++|.+.||++|.. +.|.+++++.+. .++.++-|.+ |++
T Consensus 21 ~~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~------~~v~~~~vd~--------~~~------------------- 66 (126)
T 1x5e_A 21 LEGD-WMIEFYAPWCPACQNLQPEWESFAEWGED------LEVNIAKVDV--------TEQ------------------- 66 (126)
T ss_dssp TSSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEET--------TTC-------------------
T ss_pred hCCC-EEEEEECCCCHHHHHHhHHHHHHHHHhcc------CCeEEEEEEC--------cCC-------------------
Confidence 4454 999999999999876 578888887752 2477777643 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
+.+.+.|++++.|+++++ ++|++.
T Consensus 67 --------~~~~~~~~v~~~Pt~~~~-~~G~~~ 90 (126)
T 1x5e_A 67 --------PGLSGRFIINALPTIYHC-KDGEFR 90 (126)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred --------HHHHHHcCCcccCEEEEE-eCCeEE
Confidence 126677899999999999 899863
No 127
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.01 E-value=0.002 Score=54.04 Aligned_cols=68 Identities=13% Similarity=0.176 Sum_probs=50.0
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.++.++.+ +++.++.|.+ |+..
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~~------------------- 65 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYK-------GKAVFGRLNV--------DENQ------------------- 65 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TTCH-------------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhC-------CCceEEEEcc--------ccCH-------------------
Confidence 5899999999999999876 45777666653 2466666643 2111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++ ++|+.+.
T Consensus 66 --------~~~~~~~i~~~Pt~~~~-~~g~~~~ 89 (109)
T 3tco_A 66 --------KIADKYSVLNIPTTLIF-VNGQLVD 89 (109)
T ss_dssp --------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHhcCcccCCEEEEE-cCCcEEE
Confidence 24567799999999999 9998775
No 128
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.01 E-value=0.0017 Score=54.98 Aligned_cols=67 Identities=12% Similarity=0.259 Sum_probs=49.8
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.++.++.. +++.++.|.+ |+..
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~v~~~~vd~--------~~~~------------------- 66 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYE-------ESFGFYYVDV--------EEEK------------------- 66 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TTCH-------------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcC-------CceEEEEEEC--------CcCh-------------------
Confidence 4789999999999999876 45666665543 3577777754 2111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
.+.+.|++++.|+++++ .+|+.+
T Consensus 67 --------~l~~~~~v~~~Pt~~~~-~~g~~~ 89 (111)
T 3gnj_A 67 --------TLFQRFSLKGVPQILYF-KDGEYK 89 (111)
T ss_dssp --------HHHHHTTCCSSCEEEEE-ETTEEE
T ss_pred --------hHHHhcCCCcCCEEEEE-ECCEEE
Confidence 35677899999999999 688876
No 129
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.00 E-value=0.0012 Score=66.24 Aligned_cols=68 Identities=16% Similarity=0.237 Sum_probs=53.1
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. |.|.+++++.+ +++.++.|.+ |+..
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~-------~~~~~~~vd~--------~~~~------------------- 70 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYN-------GQFILAKLDC--------DAEQ------------------- 70 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHT-------SSSEEEEEET--------TTCH-------------------
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcC-------CCeEEEEEeC--------ccCH-------------------
Confidence 4899999999999999865 77888888774 2477777754 2211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|+++++|+++++ .+|+++.
T Consensus 71 --------~~~~~~~v~~~Pt~~~~-~~G~~~~ 94 (287)
T 3qou_A 71 --------MIAAQFGLRAIPTVYLF-QNGQPVD 94 (287)
T ss_dssp --------HHHHTTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCCCCeEEEE-ECCEEEE
Confidence 46678899999999999 6898774
No 130
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.001 Score=66.97 Aligned_cols=109 Identities=14% Similarity=0.105 Sum_probs=72.9
Q ss_pred CCCCceeecceecCcEEEEEEe-cCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHh
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVS-DLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fS-al~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
+.++..|++++++||.|.|||= +.|+|.|-+ ..+.+.|+++++ .+.+||-||. | +......|.+-
T Consensus 39 d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~------~g~~vigiS~-D-----s~~sh~aw~~~ 106 (216)
T 3sbc_A 39 DGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEE------QGAQVLFAST-D-----SEYSLLAWTNI 106 (216)
T ss_dssp TTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHH------TTEEEEEEES-S-----CHHHHHHHHTS
T ss_pred CCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhcc------CCceEEEeec-C-----chhhHHHHHHH
Confidence 4466799999999999999997 566666555 579999999974 4699999986 4 24556677542
Q ss_pred -hcCCCceeeccCCCCCHHHHHHHHHhhCCC------CCcEEEEECCCCceec
Q 005245 410 -QYMMPWFSVHHPSAIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVN 455 (706)
Q Consensus 410 -~~~MPWyAVpf~~~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~ 455 (706)
.....-..++||-+.|. -+.+.+.|++- ..+...|+||+|++..
T Consensus 107 ~~~~~~~~~l~fpllsD~--~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~ 157 (216)
T 3sbc_A 107 PRKEGGLGPINIPLLADT--NHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRH 157 (216)
T ss_dssp CGGGTCCCSCSSCEEECT--TSHHHHHHTCEETTTTEECEEEEEECTTSBEEE
T ss_pred HHHhCCccCcccceEeCC--CCHHHHHcCCeeccCCceeeEEEEECCCCeEEE
Confidence 22222234555422222 23344555652 2478999999999853
No 131
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.98 E-value=0.002 Score=53.21 Aligned_cols=67 Identities=7% Similarity=0.068 Sum_probs=49.2
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.++.++.+ + +.++.|.+ |++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~-~~~~~v~~--------~~~-------------------- 58 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYP-------Q-VGFGKLNS--------DEN-------------------- 58 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-------T-SEEEEEET--------TTC--------------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcC-------C-ceEEEEEC--------CCC--------------------
Confidence 5899999999999999876 45666555442 2 77777754 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 59 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 83 (104)
T 2e0q_A 59 -------PDIAARYGVMSLPTVIFF-KDGEPVD 83 (104)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCccccCEEEEE-ECCeEhh
Confidence 125567899999999999 8999864
No 132
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.95 E-value=0.00096 Score=59.72 Aligned_cols=68 Identities=19% Similarity=0.290 Sum_probs=50.9
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.++.++.+ +++.++.|.+ |++ +
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--------~~~------------------~- 84 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------------------P- 84 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTT-------TTEEEEEEET--------TTC------------------C-
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEEC--------CCC------------------H-
Confidence 4899999999999999876 56777776653 3477777754 211 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++ ++|+++.
T Consensus 85 --------~l~~~~~v~~~Pt~~~~-~~G~~~~ 108 (128)
T 2o8v_B 85 --------GTAPKYGIRGIPTLLLF-KNGEVAA 108 (128)
T ss_dssp --------TTSGGGTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCccCEEEEE-eCCEEEE
Confidence 14467899999999999 8999864
No 133
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.94 E-value=0.0019 Score=56.44 Aligned_cols=67 Identities=7% Similarity=0.111 Sum_probs=49.1
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.+++++.+ ++.++.|.+ |++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~--------~v~~~~vd~--------~~~-------------------- 72 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP--------DVRFVKCDV--------DES-------------------- 72 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEEC--------CCC--------------------
Confidence 5899999999999999876 56776666542 266666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 73 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 97 (114)
T 2oe3_A 73 -------PDIAKECEVTAMPTFVLG-KDGQLIG 97 (114)
T ss_dssp -------HHHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred -------HHHHHHCCCCcccEEEEE-eCCeEEE
Confidence 125677899999999887 8998864
No 134
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=96.92 E-value=0.0013 Score=57.57 Aligned_cols=68 Identities=10% Similarity=0.132 Sum_probs=47.8
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.+||.|+++|.+.||++|.. +.|.+++++. .++.++-|.+ |+.
T Consensus 29 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~--------~~v~~~~vd~--------d~~------------------- 73 (116)
T 3qfa_C 29 AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKY--------SNVIFLEVDV--------DDC------------------- 73 (116)
T ss_dssp HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTC--------TTSEEEEEET--------TTT-------------------
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--------CCCEEEEEEC--------CCC-------------------
Confidence 36899999999999999875 3455444333 2366666643 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ .+|+.+.
T Consensus 74 --------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 98 (116)
T 3qfa_C 74 --------QDVASECEVKSMPTFQFF-KKGQKVG 98 (116)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-SSSSEEE
T ss_pred --------HHHHHHcCCccccEEEEE-eCCeEEE
Confidence 235677899999999999 7898764
No 135
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.91 E-value=0.0021 Score=54.62 Aligned_cols=67 Identities=4% Similarity=-0.032 Sum_probs=48.2
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.++.++. .++.++.|.+ |+.
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~--------~~~~~~~vd~--------~~~-------------------- 63 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY--------PQAVFLEVDV--------HQC-------------------- 63 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTS--------------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHC--------CCcEEEEEEC--------ccC--------------------
Confidence 5899999999999999876 3455554443 2466676644 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.+.+.|++++.|+++++ .+|+.+.
T Consensus 64 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 88 (107)
T 1gh2_A 64 -------QGTAATNNISATPTFQFF-RNKVRID 88 (107)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCCCcccEEEEE-ECCeEEE
Confidence 225577899999999999 7888764
No 136
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.91 E-value=0.0039 Score=53.77 Aligned_cols=69 Identities=14% Similarity=0.206 Sum_probs=49.4
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCC
Q 005245 345 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAI 424 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~i 424 (706)
++|.++++|.+.||++|.. +...++++.+. -.++.++.|.+ |+.
T Consensus 18 ~~~~~vv~f~a~wC~~C~~--~~~~l~~~~~~----~~~v~~~~vd~--------~~~---------------------- 61 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKN--MEKVLDKFGAR----APQVAISSVDS--------EAR---------------------- 61 (110)
T ss_dssp TCSEEEEEEECSSCSTHHH--HHHHHHHHHTT----CTTSCEEEEEG--------GGC----------------------
T ss_pred cCCCEEEEEECCCCHhHHH--HHHHHHHHHHH----CCCcEEEEEcC--------cCC----------------------
Confidence 4789999999999999986 34455555431 23567777643 221
Q ss_pred CHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 425 DPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 425 d~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ .+|+++.
T Consensus 62 -----~~l~~~~~v~~~Pt~~~~-~~G~~v~ 86 (110)
T 2l6c_A 62 -----PELMKELGFERVPTLVFI-RDGKVAK 86 (110)
T ss_dssp -----HHHHHHTTCCSSCEEEEE-ESSSEEE
T ss_pred -----HHHHHHcCCcccCEEEEE-ECCEEEE
Confidence 125667899999999999 8999874
No 137
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.96 E-value=0.00014 Score=64.04 Aligned_cols=78 Identities=12% Similarity=0.201 Sum_probs=52.5
Q ss_pred CceeecceecCcEEEEEEecCCCChhHH--HHH---HHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhh
Q 005245 336 KRKVSIDVLRRKSVLLLVSDLDVSNEEL--FLL---EQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 336 ~~kV~Is~L~gK~VlL~fSal~~~~~e~--~~L---~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
...+.....+||.|+++|.+.||++|.. +.| .++.+.++ .++.++-|.+ |.++
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~~~------- 66 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLE-------ARFVVASVSV--------DTPE------- 66 (130)
Confidence 3355666778999999999999999876 334 44444332 3466655533 1110
Q ss_pred cCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCC-Cce
Q 005245 411 YMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQ-GRV 453 (706)
Q Consensus 411 ~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pq-Gkv 453 (706)
...+.+.|++++.|+++++||+ |++
T Consensus 67 ------------------~~~~~~~~~v~~~Pt~~~~d~~~G~~ 92 (130)
T 2lst_A 67 ------------------GQELARRYRVPGTPTFVFLVPKAGAW 92 (130)
Confidence 1235567799999999999985 776
No 138
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.89 E-value=0.0012 Score=56.09 Aligned_cols=67 Identities=9% Similarity=0.176 Sum_probs=41.9
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.++.++. .++.++-|.+ |+..
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~--------~~~~~~~vd~--------~~~~------------------- 61 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENY--------NYVEKIEILL--------QDMQ------------------- 61 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTC--------TTEEEEEEEE--------CCC--------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHc--------CCceEEEEEC--------CCCH-------------------
Confidence 5899999999999999876 3454444432 2466666644 2111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++. +|+++.
T Consensus 62 --------~l~~~~~v~~~Pt~~~~~-~G~~~~ 85 (105)
T 4euy_A 62 --------EIAGRYAVFTGPTVLLFY-NGKEIL 85 (105)
T ss_dssp ----------------CCCCEEEEEE-TTEEEE
T ss_pred --------HHHHhcCCCCCCEEEEEe-CCeEEE
Confidence 244667999999999995 898874
No 139
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=96.89 E-value=0.0015 Score=55.16 Aligned_cols=73 Identities=12% Similarity=0.110 Sum_probs=47.0
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCC
Q 005245 345 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAI 424 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~i 424 (706)
++|.|+++|.+.||++|.. +...++++.+.......++.++-|.+ |+..
T Consensus 20 ~~~~~lv~f~~~~C~~C~~--~~~~~~~~~~~~~~~~~~~~~~~vd~--------~~~~--------------------- 68 (111)
T 3uvt_A 20 AEGITFIKFYAPWCGHCKT--LAPTWEELSKKEFPGLAGVKIAEVDC--------TAER--------------------- 68 (111)
T ss_dssp HSSEEEEEEECSSCHHHHH--HHHHHHHHHTCCCCC-CCEEEEEEET--------TTCH---------------------
T ss_pred cCCcEEEEEECCCChhHHH--hhHHHHHHHHHhhccCCceEEEEEec--------cccH---------------------
Confidence 4899999999999999876 33444444321101123566655533 2111
Q ss_pred CHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 425 DPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 425 d~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++ ++|+.+.
T Consensus 69 ------~l~~~~~v~~~Pt~~~~-~~g~~~~ 92 (111)
T 3uvt_A 69 ------NICSKYSVRGYPTLLLF-RGGKKVS 92 (111)
T ss_dssp ------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ------hHHHhcCCCcccEEEEE-eCCcEEE
Confidence 25677899999999998 7887653
No 140
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.89 E-value=0.002 Score=54.70 Aligned_cols=67 Identities=12% Similarity=0.150 Sum_probs=49.1
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 346 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
||.|+++|.+.||++|.. +.|.++.++.. +++.++.|.+ |+
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~---------------------- 66 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYA-------GKVIFLKVDV--------DA---------------------- 66 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TT----------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CCeEEEEEEC--------Cc----------------------
Confidence 899999999999999876 45766666553 2577777743 21
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 424 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 424 id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
...+.+.|++++.|+++++ ++|+++.
T Consensus 67 -----~~~~~~~~~v~~~Pt~~~~-~~G~~~~ 92 (112)
T 1ep7_A 67 -----VAAVAEAAGITAMPTFHVY-KDGVKAD 92 (112)
T ss_dssp -----THHHHHHHTCCBSSEEEEE-ETTEEEE
T ss_pred -----hHHHHHHcCCCcccEEEEE-ECCeEEE
Confidence 1235567799999998877 7999864
No 141
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.89 E-value=0.0025 Score=56.53 Aligned_cols=67 Identities=7% Similarity=0.217 Sum_probs=48.1
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.+++++.. ++.++.|.+ |++
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--------d~~-------------------- 80 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--------NVLFLKVDT--------DEL-------------------- 80 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--------TTS--------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--------ccC--------------------
Confidence 5899999999999999876 45665555431 466666543 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 81 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1xfl_A 81 -------KSVASDWAIQAMPTFMFL-KEGKILD 105 (124)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCccCEEEEE-ECCEEEE
Confidence 235567899999999887 8999874
No 142
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.87 E-value=0.0028 Score=52.88 Aligned_cols=68 Identities=12% Similarity=0.153 Sum_probs=49.3
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.++++|.+.||++|.. +.|.+++++.+ +++.++.|.+ |++
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 61 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYS-------GKIAVYKLNT--------DEA-------------------- 61 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhc-------CceEEEEEcC--------cch--------------------
Confidence 3789999999999999876 45777766653 2466666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 62 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 86 (105)
T 1fb6_A 62 -------PGIATQYNIRSIPTVLFF-KNGERKE 86 (105)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCeEEE
Confidence 135567899999998888 6998764
No 143
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.85 E-value=0.0012 Score=58.22 Aligned_cols=69 Identities=7% Similarity=0.100 Sum_probs=49.1
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.+++++++. ..++.++.|-+ |+. +
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-----~~~~~~~~vd~--------~~~------------------~- 71 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKG-----QKDLVIAKMDA--------TAN------------------D- 71 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTT-----SSSEEEEEECT--------TTS------------------C-
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcC-----CCCEEEEEecC--------CcC------------------H-
Confidence 4899999999999999877 578888888752 23555555422 111 1
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCce
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRV 453 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv 453 (706)
.+.+.|++++.|+++++++.|++
T Consensus 72 --------~~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 72 --------ITNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp --------CCCSSCCCSSSSEEEEECTTCTT
T ss_pred --------HHHhhcCCCcCCEEEEEeCCCcc
Confidence 12346799999999999987754
No 144
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.85 E-value=0.0017 Score=55.58 Aligned_cols=69 Identities=14% Similarity=0.064 Sum_probs=47.9
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.+||.|+++|.+.||++|.. +.|.+++++.+ ++.++.|.+ +++
T Consensus 22 ~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--------~v~~~~vd~-------~~~-------------------- 66 (111)
T 2pu9_C 22 AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--------DVIFLKLDC-------NQE-------------------- 66 (111)
T ss_dssp CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEEC-------SST--------------------
T ss_pred cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--------CeEEEEEec-------Ccc--------------------
Confidence 46899999999999999875 46766666542 355555533 111
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
...+.+.|++++.|++ +++++|+++.
T Consensus 67 -------~~~~~~~~~v~~~Pt~-~~~~~G~~~~ 92 (111)
T 2pu9_C 67 -------NKTLAKELGIRVVPTF-KILKENSVVG 92 (111)
T ss_dssp -------THHHHHHHCCSBSSEE-EEESSSSEEE
T ss_pred -------hHHHHHHcCCCeeeEE-EEEeCCcEEE
Confidence 1235567899999995 5569999764
No 145
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.85 E-value=0.0023 Score=56.84 Aligned_cols=70 Identities=16% Similarity=0.194 Sum_probs=51.4
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.+++++++. .+.++.++.|-+ |++
T Consensus 33 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~----~~~~v~~~~vd~--------~~~-------------------- 80 (140)
T 2dj1_A 33 DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKD----NDPPIAVAKIDA--------TSA-------------------- 80 (140)
T ss_dssp TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHS----SSSCCEEEEECT--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhc----cCCceEEEEEeC--------ccc--------------------
Confidence 4899999999999999865 679999988863 233455555522 110
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
..+.+.|++++.|+++++ .+|++.
T Consensus 81 -------~~~~~~~~v~~~Pt~~~~-~~G~~~ 104 (140)
T 2dj1_A 81 -------SMLASKFDVSGYPTIKIL-KKGQAV 104 (140)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEE
T ss_pred -------HHHHHHCCCCccCeEEEE-ECCcEE
Confidence 235677899999999999 789844
No 146
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.85 E-value=0.0019 Score=55.97 Aligned_cols=68 Identities=7% Similarity=-0.082 Sum_probs=50.7
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.|.+++++++ +++.++-|.+ |+..
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~~~------------------- 65 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIK-------GKVRAGKVDC--------QAYP------------------- 65 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--------TTCH-------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeC--------cCCH-------------------
Confidence 3789999999999999876 56777777764 2466666644 2111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
.+.+.|++++.|++++++++|++.
T Consensus 66 --------~~~~~~~v~~~Pt~~~~~~~~~~~ 89 (122)
T 3aps_A 66 --------QTCQKAGIKAYPSVKLYQYERAKK 89 (122)
T ss_dssp --------HHHHHTTCCSSSEEEEEEEEGGGT
T ss_pred --------HHHHHcCCCccceEEEEeCCCccc
Confidence 255678999999999999888753
No 147
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.85 E-value=0.0031 Score=55.28 Aligned_cols=66 Identities=5% Similarity=-0.050 Sum_probs=49.5
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.|.+++++++ +.+.++.|.+ |+.
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~--------~~~-------------------- 78 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALK-------DVVKVGAVNA--------DKH-------------------- 78 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTT-------TTSEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhc-------CceEEEEEeC--------CCC--------------------
Confidence 3789999999999988765 67887777764 2366666632 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCc
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGR 452 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGk 452 (706)
+.+.+.|++++.|++++++++|+
T Consensus 79 -------~~l~~~~~v~~~Pt~~~~~~~~~ 101 (130)
T 2dml_A 79 -------QSLGGQYGVQGFPTIKIFGANKN 101 (130)
T ss_dssp -------HHHHHHHTCCSSSEEEEESSCTT
T ss_pred -------HHHHHHcCCCccCEEEEEeCCCC
Confidence 23556789999999999999987
No 148
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.84 E-value=0.0023 Score=58.76 Aligned_cols=67 Identities=12% Similarity=0.165 Sum_probs=49.4
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.+++++. .++.++-|.+ |+.
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~--------~~v~~~~vd~--------~~~-------------------- 74 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKEL--------PQVSFVKLEA--------EGV-------------------- 74 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTS--------------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHc--------CCeEEEEEEC--------CCC--------------------
Confidence 4899999999999999876 4555555543 2467777643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.+.+.|++++.|++++++ +|+++.
T Consensus 75 -------~~l~~~~~v~~~Pt~~~~~-~G~~~~ 99 (153)
T 2wz9_A 75 -------PEVSEKYEISSVPTFLFFK-NSQKID 99 (153)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCCCCCEEEEEE-CCEEEE
Confidence 1356778999999999999 999874
No 149
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.82 E-value=0.0018 Score=57.68 Aligned_cols=68 Identities=13% Similarity=0.169 Sum_probs=50.0
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.+||.|+++|.+.||++|.. +.|.+++++. .++.++.|.+ |+.
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~--------~~v~~~~v~~--------~~~------------------- 88 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENY--------PSLMFLVIDV--------DEL------------------- 88 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTS-------------------
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--------CCCEEEEEeC--------ccc-------------------
Confidence 46999999999999999876 4566665543 2466776643 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 89 --------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 113 (139)
T 3d22_A 89 --------SDFSASWEIKATPTFFFL-RDGQQVD 113 (139)
T ss_dssp --------HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred --------HHHHHHcCCCcccEEEEE-cCCeEEE
Confidence 235677899999999988 8999874
No 150
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.82 E-value=0.002 Score=53.95 Aligned_cols=68 Identities=9% Similarity=0.093 Sum_probs=47.9
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.+||.|+++|.+.||++|.. +.|.++.++.+ ++.++.|.+ |+.
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--------~~~~~~vd~--------~~~------------------- 62 (105)
T 3m9j_A 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS--------NVIFLEVDV--------DDC------------------- 62 (105)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST--------TSEEEEEET--------TTC-------------------
T ss_pred cCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc--------CeEEEEEEh--------hhh-------------------
Confidence 36899999999999999876 34555555432 266666543 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.+.+.|++++.|+++++ .+|+.+.
T Consensus 63 --------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (105)
T 3m9j_A 63 --------QDVASESEVKSMPTFQFF-KKGQKVG 87 (105)
T ss_dssp --------HHHHHHTTCCBSSEEEEE-ETTEEEE
T ss_pred --------HHHHHHcCCCcCcEEEEE-ECCeEEE
Confidence 125567899999999999 7888764
No 151
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.79 E-value=0.0018 Score=56.82 Aligned_cols=66 Identities=9% Similarity=0.095 Sum_probs=48.7
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 346 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
||.|+++|.+.||++|.. +.|.++++++ .++.++.|.+ |+.
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--------~~v~~~~vd~--------~~~--------------------- 65 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQILPSIAEAN--------KDVTFIKVDV--------DKN--------------------- 65 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTC---------------------
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC--------CCeEEEEEEC--------CCC---------------------
Confidence 899999999999999876 4566655544 3477777754 211
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEECC---CCcee
Q 005245 424 IDPAVIRYAKEKWDFRKKPILVVLDP---QGRVV 454 (706)
Q Consensus 424 id~~~~r~ike~~~~~~iP~LVvL~p---qGkv~ 454 (706)
..+.+.|++++.|++++++. +|+++
T Consensus 66 ------~~~~~~~~i~~~Pt~~~~~~~~~~G~~~ 93 (118)
T 2f51_A 66 ------GNAADAYGVSSIPALFFVKKEGNEIKTL 93 (118)
T ss_dssp ------HHHHHHTTCCSSSEEEEEEEETTEEEEE
T ss_pred ------HHHHHhcCCCCCCEEEEEeCCCCcceEE
Confidence 12567889999999999987 47765
No 152
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=96.79 E-value=0.0003 Score=66.07 Aligned_cols=99 Identities=13% Similarity=0.165 Sum_probs=59.8
Q ss_pred eecceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCce
Q 005245 339 VSIDVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWF 416 (706)
Q Consensus 339 V~Is~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWy 416 (706)
+.....+||.|+|+|.+.||++|.. +.|.++.+..+ .+.+++.|.+ |.+.+.
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~-------~~~~~~~v~~--------d~~~~~----------- 92 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISE-------LSHNFVMVNL--------EDEEEP----------- 92 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHH-------HHTTSEEEEE--------EGGGSC-----------
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhh-------cCCeEEEEEe--------cCCchH-----------
Confidence 3444568999999999999999876 45666544332 1256777765 222110
Q ss_pred eeccCCCCCHHHHHHHHHhhCC--CCCcEEEEECCCCceecccHHHHHHHhCcccccCChhhHHHhhh
Q 005245 417 SVHHPSAIDPAVIRYAKEKWDF--RKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWK 482 (706)
Q Consensus 417 AVpf~~~id~~~~r~ike~~~~--~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AFPFT~~r~eeL~~ 482 (706)
+.+.|++ ++.|+++++|++|+++.. ++-..|...|.|.....++|.+
T Consensus 93 ---------------~~~~~~~~~~~~Pt~~~~d~~G~~~~~----~~G~~~~~~~~~~~~~~~~l~~ 141 (164)
T 1sen_A 93 ---------------KDEDFSPDGGYIPRILFLDPSGKVHPE----IINENGNPSYKYFYVSAEQVVQ 141 (164)
T ss_dssp ---------------SCGGGCTTCSCSSEEEEECTTSCBCTT----CCCTTSCTTSTTCCCSHHHHHH
T ss_pred ---------------HHHHhcccCCcCCeEEEECCCCCEEEE----EeCCCCccchhcccCCHHHHHH
Confidence 0123455 569999999999999854 1122334444444344444443
No 153
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.77 E-value=0.0015 Score=59.90 Aligned_cols=69 Identities=6% Similarity=0.010 Sum_probs=51.6
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.||.|+++|.+.||++|.. +.|.+++++.+ +++.++.|-+ |+. +
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--------d~~------------------~- 67 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVK-------NFAVIYLVDI--------TEV------------------P- 67 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEET--------TTC------------------C-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCeEEEEEcc--------ccC------------------H-
Confidence 4899999999999999876 57888887774 2477777754 211 1
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
.+.+.|++++.|+++++ .+|+.+..
T Consensus 68 --------~~~~~~~i~~~Pt~~~~-~~G~~v~~ 92 (142)
T 1qgv_A 68 --------DFNKMYELYDPCTVMFF-FRNKHIMI 92 (142)
T ss_dssp --------TTTTSSCSCSSCEEEEE-ETTEEEEE
T ss_pred --------HHHHHcCCCCCCEEEEE-ECCcEEEE
Confidence 13567899999999999 48888753
No 154
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.77 E-value=0.0036 Score=53.80 Aligned_cols=67 Identities=12% Similarity=0.095 Sum_probs=48.3
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.+++++.+ ++.++.|.+ |+..
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--------~~~~------------------- 69 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--------KMVFIKVDV--------DEVS------------------- 69 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTTH-------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--------CCEEEEEEC--------CCCH-------------------
Confidence 6899999999999999876 45666655532 367776643 2111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++ .+|+++.
T Consensus 70 --------~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (112)
T 1syr_A 70 --------EVTEKENITSMPTFKVY-KNGSSVD 93 (112)
T ss_dssp --------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred --------HHHHHcCCCcccEEEEE-ECCcEEE
Confidence 35567899999998877 5898864
No 155
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.71 E-value=0.0042 Score=53.41 Aligned_cols=68 Identities=18% Similarity=0.244 Sum_probs=49.6
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.|.++.++.+ +++.++.|.+ |+.
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 73 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERA-------TDLTVAKLDV--------DTN-------------------- 73 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCC--------------------
Confidence 4789999999999999876 45666665543 3577777754 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 74 -------~~~~~~~~i~~~Pt~~~~-~~g~~~~ 98 (121)
T 2i1u_A 74 -------PETARNFQVVSIPTLILF-KDGQPVK 98 (121)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHhcCCCcCCEEEEE-ECCEEEE
Confidence 125567899999999988 5998864
No 156
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=96.71 E-value=0.003 Score=55.35 Aligned_cols=70 Identities=16% Similarity=0.178 Sum_probs=47.4
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCC
Q 005245 345 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAI 424 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~i 424 (706)
.+|.|++.|.|.||++|.. +...++++.+. -.+ ++|+-+ |. |+.
T Consensus 19 ~~k~vvv~F~a~wC~~C~~--~~p~~~~~~~~----~~~--~~~~~v-d~-----d~~---------------------- 62 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKM--IAPKLEELSQS----MSD--VVFLKV-DV-----DEC---------------------- 62 (105)
T ss_dssp TTSEEEEEEECTTCHHHHH--HHHHHHHHHHH----CTT--EEEEEE-ET-----TTC----------------------
T ss_pred CCCEEEEEEECCCCCCccC--CCcchhhhhhc----cCC--eEEEEE-ec-----ccC----------------------
Confidence 4789999999999999975 44555555432 123 455544 21 211
Q ss_pred CHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 425 DPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 425 d~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..|.+.|++++.|+++++ .+|+.+..
T Consensus 63 -----~~l~~~~~V~~~PT~~~~-~~G~~v~~ 88 (105)
T 3zzx_A 63 -----EDIAQDNQIACMPTFLFM-KNGQKLDS 88 (105)
T ss_dssp -----HHHHHHTTCCBSSEEEEE-ETTEEEEE
T ss_pred -----HHHHHHcCCCeecEEEEE-ECCEEEEE
Confidence 125677899999999888 68988753
No 157
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.70 E-value=0.0036 Score=56.02 Aligned_cols=69 Identities=6% Similarity=0.052 Sum_probs=48.9
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.+++++.+ +.++.++.|-+ |+..
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~------~~~v~~~~vd~--------~~~~------------------- 71 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPIYADLSLKYN------CTGLNFGKVDV--------GRYT------------------- 71 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHC------SSSCEEEECCT--------TTCH-------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC------CCCeEEEEEeC--------ccCH-------------------
Confidence 4568999999999988765 67888887774 23566666532 2221
Q ss_pred CCCHHHHHHHHHhhCCC------CCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFR------KKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~------~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|+++ +.|+++++ .+|+++.
T Consensus 72 --------~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~ 101 (137)
T 2dj0_A 72 --------DVSTRYKVSTSPLTKQLPTLILF-QGGKEAM 101 (137)
T ss_dssp --------HHHHHTTCCCCSSSSCSSEEEEE-SSSSEEE
T ss_pred --------HHHHHccCcccCCcCCCCEEEEE-ECCEEEE
Confidence 134556776 99999999 7898875
No 158
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.69 E-value=0.0033 Score=58.38 Aligned_cols=68 Identities=9% Similarity=0.042 Sum_probs=51.7
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.|.+++++++ +++.++-|.+ |++
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~-------~~v~~~~vd~--------~~~-------------------- 107 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLA-------GQVRLAKIDT--------QAH-------------------- 107 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--------TTS--------------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCEEEEEEeC--------Ccc--------------------
Confidence 5899999999999998876 56888887774 2466666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|+++++|+++++ .+|+++.
T Consensus 108 -------~~l~~~~~i~~~Pt~~~~-~~G~~~~ 132 (155)
T 2ppt_A 108 -------PAVAGRHRIQGIPAFILF-HKGRELA 132 (155)
T ss_dssp -------THHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcCCEEEEE-eCCeEEE
Confidence 135678899999999999 7999864
No 159
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.68 E-value=0.0064 Score=57.39 Aligned_cols=100 Identities=7% Similarity=0.018 Sum_probs=64.6
Q ss_pred ceeeccee-cCc-EEEEEEecCCCChhH---HHHHHHHHHHHhhcccCCCCCeE-EEEEecccCCCCcChhhHHHHHHhh
Q 005245 337 RKVSIDVL-RRK-SVLLLVSDLDVSNEE---LFLLEQMYRESRQLSSRTESQYE-VVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 337 ~kV~Is~L-~gK-~VlL~fSal~~~~~e---~~~L~~iY~elk~~~~~~~~~fE-IVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
+.|+++++ +|| .|+++|=+.|||+|. ++.|.+.|+++++ .+++ ||-|+. | +....+.|-+-.
T Consensus 33 ~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~------~g~~~vv~Is~-d-----~~~~~~~~~~~~ 100 (171)
T 2pwj_A 33 STTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKA------KGVDSVICVAI-N-----DPYTVNAWAEKI 100 (171)
T ss_dssp CCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHH------TTCSEEEEEES-S-----CHHHHHHHHHHT
T ss_pred ceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C-----CHHHHHHHHHHh
Confidence 89999996 996 667788999998875 6779999999974 3588 999986 3 234456675543
Q ss_pred cC-CCceeeccCCCCCHHHHHHHHHhhCCC--------C---CcEEEEECCCCceecc
Q 005245 411 YM-MPWFSVHHPSAIDPAVIRYAKEKWDFR--------K---KPILVVLDPQGRVVNQ 456 (706)
Q Consensus 411 ~~-MPWyAVpf~~~id~~~~r~ike~~~~~--------~---iP~LVvL~pqGkv~~~ 456 (706)
.- .|+..+--+ +.+.. +.|++. | .|.-+++| +|++...
T Consensus 101 ~~~~~fp~l~D~---~~~~~----~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~ 150 (171)
T 2pwj_A 101 QAKDAIEFYGDF---DGSFH----KSLELTTDLSAGLLGIRSERWSAYVV-DGKVKAL 150 (171)
T ss_dssp TCTTTSEEEECT---TCHHH----HHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEE
T ss_pred CCCCceEEEECC---ccHHH----HHhCCccccccccCCcccceeEEEEE-CCEEEEE
Confidence 31 122222221 12333 344553 1 45666677 9999864
No 160
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.67 E-value=0.0039 Score=54.00 Aligned_cols=67 Identities=9% Similarity=0.170 Sum_probs=48.1
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.+++++.+ ++.++.|.+ |++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~vd~--------~~~-------------------- 76 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP--------NAVFLKVDV--------DEL-------------------- 76 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--------CCC--------------------
Confidence 4899999999999999876 45666655542 266666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 77 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 101 (122)
T 2vlu_A 77 -------KPIAEQFSVEAMPTFLFM-KEGDVKD 101 (122)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCEEEE
Confidence 135567899999998877 8998863
No 161
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.65 E-value=0.0022 Score=59.27 Aligned_cols=67 Identities=10% Similarity=0.060 Sum_probs=48.9
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|++.|.+.||++|.. +.|.+++++.+ +.+.++-|-+ |+.
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~-------~~~~~~~vd~--------d~~-------------------- 66 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLS-------KMAAIYLVDV--------DQT-------------------- 66 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTT-------TTEEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--------CcC--------------------
Confidence 3899999999999999876 56776665543 3366666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
..+.+.|++++.|+++ +..+|+.+
T Consensus 67 -------~~l~~~~~v~~~Pt~~-~~~~G~~v 90 (149)
T 3gix_A 67 -------AVYTQYFDISYIPSTV-FFFNGQHM 90 (149)
T ss_dssp -------CHHHHHTTCCSSSEEE-EEETTEEE
T ss_pred -------HHHHHHcCCCccCeEE-EEECCeEE
Confidence 1255778999999999 77899988
No 162
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=96.62 E-value=0.00085 Score=63.40 Aligned_cols=93 Identities=12% Similarity=0.162 Sum_probs=59.2
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHH---HHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceee
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQ---MYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSV 418 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~---iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAV 418 (706)
-+||.|+|.|.|.||++|.. +.+.+ +.+.++ .+ +|.|-+ |.+.
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~-------~~--fv~V~v--------D~e~--------------- 89 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ-------NK--FIMLNL--------MHET--------------- 89 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH-------HT--CEEEEE--------SSCC---------------
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh-------cC--eEEEEe--------cCCc---------------
Confidence 36999999999999999987 33332 222221 12 344543 2110
Q ss_pred ccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecccHHHHHHHhCcccccCChhhHHHhhhh
Q 005245 419 HHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKE 483 (706)
Q Consensus 419 pf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AFPFT~~r~eeL~~~ 483 (706)
. +. ...++++++|++++++|+|+++.. ++-..+..-|+++.+..+++-+.
T Consensus 90 ---~--~~------~~~~~v~~~PT~~f~~~~G~~v~~----~~G~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 90 ---T--DK------NLSPDGQYVPRIMFVDPSLTVRAD----IAGRYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp ---S--CG------GGCTTCCCSSEEEEECTTSCBCTT----CCCSCTTSTTCCCGGGHHHHHHH
T ss_pred ---h--hh------HhhcCCCCCCEEEEECCCCCEEEE----EeCCcCCcccccchhhHHHHHHH
Confidence 0 00 124577999999999999999873 23344567788988877766543
No 163
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.62 E-value=0.0042 Score=55.53 Aligned_cols=67 Identities=7% Similarity=0.067 Sum_probs=48.7
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.+++++. .++.++.|.+ |++
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--------~~v~~~~vd~--------d~~-------------------- 79 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEF--------PTVKFAKVDA--------DNN-------------------- 79 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHC--------TTSEEEEEET--------TTC--------------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHC--------CCCEEEEEEC--------CCC--------------------
Confidence 5799999999999999876 4566655544 2477777754 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 80 -------~~l~~~~~v~~~Pt~~i~-~~G~~~~ 104 (125)
T 1r26_A 80 -------SEIVSKCRVLQLPTFIIA-RSGKMLG 104 (125)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-eCCeEEE
Confidence 125667899999998887 8998764
No 164
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.62 E-value=0.0037 Score=56.36 Aligned_cols=67 Identities=18% Similarity=0.227 Sum_probs=50.2
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 346 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
+|.|+++|.+.||++|.. +.|.++.++.+ +++.++.|-+ |+.
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--------~~~--------------------- 67 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYG-------SSAVFGRINI--------ATN--------------------- 67 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTSEEEEEET--------TTC---------------------
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhC-------CceEEEEEEC--------CcC---------------------
Confidence 899999999999999876 46777777664 2477777743 211
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 424 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 424 id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ .+|+.+.
T Consensus 68 ------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 92 (140)
T 3hz4_A 68 ------PWTAEKYGVQGTPTFKFF-CHGRPVW 92 (140)
T ss_dssp ------HHHHHHHTCCEESEEEEE-ETTEEEE
T ss_pred ------HhHHHHCCCCcCCEEEEE-eCCcEEE
Confidence 135567899999999999 7898763
No 165
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.58 E-value=0.0049 Score=55.72 Aligned_cols=69 Identities=10% Similarity=0.137 Sum_probs=50.7
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
-++|.|+++|.+.||++|.. +.|.+++++.+ +++.++-|.+ |+..
T Consensus 53 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~--------~~~~------------------ 99 (148)
T 3p2a_A 53 QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERA-------GKVRFVKVNT--------EAEP------------------ 99 (148)
T ss_dssp TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTCH------------------
T ss_pred hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CceEEEEEEC--------cCCH------------------
Confidence 46899999999999998876 56777777653 3466666643 2111
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++ .+|+.+.
T Consensus 100 ---------~l~~~~~v~~~Pt~~~~-~~G~~~~ 123 (148)
T 3p2a_A 100 ---------ALSTRFRIRSIPTIMLY-RNGKMID 123 (148)
T ss_dssp ---------HHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ---------HHHHHCCCCccCEEEEE-ECCeEEE
Confidence 35677899999999999 5898764
No 166
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=96.56 E-value=0.0077 Score=60.76 Aligned_cols=100 Identities=8% Similarity=0.096 Sum_probs=65.1
Q ss_pred CCCCceeecceecCcEEEEEEecCC-CChhH-------HHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHH
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSDLD-VSNEE-------LFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEH 404 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSal~-~~~~e-------~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~ 404 (706)
..+|+.|++++++||.|.|+|=..| ||.|. ++.|.+.| .+++||-||. | +....+
T Consensus 35 d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~~-----------~gv~VvgIS~-D-----s~~~~~ 97 (224)
T 3keb_A 35 DDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDSW-----------PHLKLIVITV-D-----SPSSLA 97 (224)
T ss_dssp ETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTTC-----------TTSEEEEEES-S-----CHHHHH
T ss_pred CCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHHc-----------CCCEEEEEEC-C-----CHHHHH
Confidence 4568899999999999999998777 67676 23333331 3589999985 4 244566
Q ss_pred HHHHhhc--CCCceeeccCCCCCHHHHHHHHHhhCCCC---------CcEEEEECCCCceeccc
Q 005245 405 KFEALQY--MMPWFSVHHPSAIDPAVIRYAKEKWDFRK---------KPILVVLDPQGRVVNQN 457 (706)
Q Consensus 405 ~Fe~~~~--~MPWyAVpf~~~id~~~~r~ike~~~~~~---------iP~LVvL~pqGkv~~~n 457 (706)
.|-+-.. ..|-++ |.. -..+.+.|++.. .|..+|+|++|++....
T Consensus 98 ~f~~~~gl~~fplLs-------D~~-~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~ 153 (224)
T 3keb_A 98 RARHEHGLPNIALLS-------TLR-GRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSE 153 (224)
T ss_dssp HHHHHHCCTTCEEEE-------STT-CTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEE
T ss_pred HHHHHcCCCCceEEE-------cCC-chHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEE
Confidence 6755432 222222 210 023444566643 79999999999998543
No 167
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=96.54 E-value=0.002 Score=54.86 Aligned_cols=70 Identities=9% Similarity=0.054 Sum_probs=49.4
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.+++++++. .+.++.++-|-+ ++ .+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~v~~~~vd~--------~~------------------~~- 71 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKA----EGSEIRLAKVDA--------TE------------------ES- 71 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTT----TCCCCBCEEEET--------TT------------------CC-
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhc----cCCcEEEEEEcC--------CC------------------CH-
Confidence 5899999999999998765 678888877752 233455554422 11 11
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
.+.+.|++++.|+++++ ++|+.+
T Consensus 72 --------~~~~~~~v~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 72 --------DLAQQYGVRGYPTIKFF-RNGDTA 94 (120)
T ss_dssp --------SSHHHHTCCSSSEEEEE-ESSCSS
T ss_pred --------HHHHHCCCCcccEEEEE-eCCCcC
Confidence 23456799999999999 688765
No 168
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=96.49 E-value=0.0049 Score=53.65 Aligned_cols=69 Identities=16% Similarity=0.088 Sum_probs=47.2
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.+||.|+++|.+.||++|.. +.|.+++++.+ ++.++.|.+ +++
T Consensus 35 ~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--------~~~~~~vd~-------~~~-------------------- 79 (124)
T 1faa_A 35 AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--------DVIFLKLDC-------NQE-------------------- 79 (124)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEEC-------SST--------------------
T ss_pred cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--------CCEEEEEec-------Ccc--------------------
Confidence 36899999999999999875 45666665542 355555532 111
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.+.|++++.|++++. ++|+++.
T Consensus 80 -------~~~~~~~~~v~~~Pt~~~~-~~G~~~~ 105 (124)
T 1faa_A 80 -------NKTLAKELGIRVVPTFKIL-KENSVVG 105 (124)
T ss_dssp -------THHHHHHHCCSSSSEEEEE-ETTEEEE
T ss_pred -------hHHHHHHcCCCeeeEEEEE-eCCcEEE
Confidence 1235567899999996655 8898764
No 169
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.49 E-value=0.0048 Score=54.12 Aligned_cols=70 Identities=10% Similarity=0.150 Sum_probs=49.2
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.++.++.+. .++.++.|.+ |+.
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~v~~~~vd~--------d~~-------------------- 77 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAG------DKVGFYKVDV--------DEQ-------------------- 77 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHH------HHSEEEEEET--------TTC--------------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcC------CcEEEEEEEC--------cCC--------------------
Confidence 4889999999999999876 346555544431 1377777754 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..+.+.|++.+.|+++++ ++|+++..
T Consensus 78 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 103 (121)
T 2j23_A 78 -------SQIAQEVGIRAMPTFVFF-KNGQKIDT 103 (121)
T ss_dssp -------HHHHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred -------HHHHHHcCCCcccEEEEE-ECCeEEee
Confidence 135567799999999988 58988653
No 170
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.47 E-value=0.0062 Score=51.60 Aligned_cols=67 Identities=10% Similarity=0.302 Sum_probs=46.7
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.++.++. .++.++.|.+ |+.
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~--------~~v~~~~v~~--------~~~-------------------- 68 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKF--------PNVTFLKVDV--------DEL-------------------- 68 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHC--------SSEEEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhC--------CCcEEEEEEc--------ccc--------------------
Confidence 4899999999999999875 3455554443 1466666643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 69 -------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 93 (113)
T 1ti3_A 69 -------KAVAEEWNVEAMPTFIFL-KDGKLVD 93 (113)
T ss_dssp -------HHHHHHHHCSSTTEEEEE-ETTEEEE
T ss_pred -------HHHHHhCCCCcccEEEEE-eCCEEEE
Confidence 124566799999999998 6998864
No 171
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.47 E-value=0.0082 Score=53.72 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=48.5
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+++.|+++|.+.||++|.. +.|.+++++.. +++.++.|.+ |..
T Consensus 49 ~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--------~~~-------------------- 93 (140)
T 1v98_A 49 GAPLTLVDFFAPWCGPCRLVSPILEELARDHA-------GRLKVVKVNV--------DEH-------------------- 93 (140)
T ss_dssp CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--------TTC--------------------
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--------CCC--------------------
Confidence 3434999999999998876 45666666553 2577777754 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 94 -------~~l~~~~~v~~~Pt~~~~-~~G~~~~ 118 (140)
T 1v98_A 94 -------PGLAARYGVRSVPTLVLF-RRGAPVA 118 (140)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -------HHHHHHCCCCccCEEEEE-eCCcEEE
Confidence 125677899999999999 7999864
No 172
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.45 E-value=0.0065 Score=51.85 Aligned_cols=67 Identities=9% Similarity=0.137 Sum_probs=47.2
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.++.++.+ ++.++.|.+ |+.
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--------~~~-------------------- 70 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--------GAIFLKVDV--------DEL-------------------- 70 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--------TTS--------------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--------CcEEEEEEc--------ccC--------------------
Confidence 4899999999999999876 34555554431 466666532 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 71 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 95 (118)
T 2vm1_A 71 -------KDVAEAYNVEAMPTFLFI-KDGEKVD 95 (118)
T ss_dssp -------HHHHHHTTCCSBSEEEEE-ETTEEEE
T ss_pred -------HHHHHHcCCCcCcEEEEE-eCCeEEE
Confidence 235567899999999988 7898764
No 173
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=96.44 E-value=0.013 Score=51.58 Aligned_cols=72 Identities=13% Similarity=0.029 Sum_probs=50.5
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.+.++.++++.. ....++.++-|-+ |+.
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~--~~~~~v~~~~vd~--------~~~-------------------- 81 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQK--RNHLTFVAARIDG--------EKY-------------------- 81 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS--TTTTTEEEEEEET--------TTC--------------------
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhc--ccCCCeEEEEEEc--------ccc--------------------
Confidence 3899999999999999876 5677777776531 1234455555422 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCce
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRV 453 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv 453 (706)
+.+.+.|++++.|+++++.+.|++
T Consensus 82 -------~~l~~~~~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 82 -------PDVIERMRVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp -------HHHHHHTTCCSSSEEEEECSSCSS
T ss_pred -------HhHHHhcCCccCCEEEEEeCCCCC
Confidence 235677899999999999887764
No 174
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.40 E-value=0.0084 Score=49.85 Aligned_cols=67 Identities=13% Similarity=0.189 Sum_probs=47.7
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.++.++. .++.++.|.+ |+.
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~--------~~~~~~~v~~--------~~~-------------------- 61 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEI--------PEVEFAKVDV--------DQN-------------------- 61 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC--------TTSEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHC--------CCCEEEEEec--------cCC--------------------
Confidence 5899999999999999876 3455554443 1477777754 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|++++++ +|+.+.
T Consensus 62 -------~~~~~~~~v~~~Pt~~~~~-~g~~~~ 86 (104)
T 2vim_A 62 -------EEAAAKYSVTAMPTFVFIK-DGKEVD 86 (104)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCccccEEEEEe-CCcEEE
Confidence 1355678999999988885 898765
No 175
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.40 E-value=0.025 Score=54.30 Aligned_cols=154 Identities=8% Similarity=0.018 Sum_probs=83.1
Q ss_pred eecCcEEEEEEecC-CCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 343 VLRRKSVLLLVSDL-DVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 343 ~L~gK~VlL~fSal-~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.++++.++++|++. ||++|. .+..+++++.+ ..+++.++.|-+ | +.
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~--~~~~~~~~la~----~~~~v~~~~vd~--------~--~~----------------- 65 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCD--QLKQLVQELSE----LTDKLSYEIVDF--------D--TP----------------- 65 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHH--HHHHHHHHHHT----TCTTEEEEEEET--------T--SH-----------------
T ss_pred hcCCCeEEEEEecCCCCchhH--HHHHHHHHHHh----hCCceEEEEEeC--------C--Cc-----------------
Confidence 45677889999999 999986 46777777763 234566666632 1 11
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecccHHHHHHHhCcccccCChhhHHHhhhhcccccccccccCCCCc-c
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKEETWRIDLLADSVDPVI-P 500 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AFPFT~~r~eeL~~~e~w~lelLvd~id~~I-~ 500 (706)
--+.+.+.|++++.|+++++ .+|+.... .-.|. | +.....++-..-. ...--+..++... .
T Consensus 66 ------~~~~~~~~~~v~~~Pt~~~~-~~g~~~~~------~~~G~---~-~~~~l~~~l~~~l-~~~~~~~~l~~~~~~ 127 (226)
T 1a8l_A 66 ------EGKELAKRYRIDRAPATTIT-QDGKDFGV------RYFGL---P-AGHEFAAFLEDIV-DVSREETNLMDETKQ 127 (226)
T ss_dssp ------HHHHHHHHTTCCSSSEEEEE-ETTBCCSE------EEESC---C-CTTHHHHHHHHHH-HHHHTCCCCCHHHHH
T ss_pred ------ccHHHHHHcCCCcCceEEEE-cCCceeeE------EEecc---C-cHHHHHHHHHHHH-hhcCCCCCCCHHHHH
Confidence 11335567899999999999 34432100 00121 1 1111111110000 0000000111111 1
Q ss_pred cccc-CceEEEEEccCCh-hHHHHHHHHHHHHHHHhC----CceeEEEeccCC
Q 005245 501 TWIM-EQKHICLYGGEDL-EWVRKFTALMGAVARAAG----IALEMLYVGKSN 547 (706)
Q Consensus 501 ~~i~-egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~----~~~E~v~Vgkdn 547 (706)
.... .++.++++|.+.+ ..|+++.+.+.++++..+ ..+.++.|.-+.
T Consensus 128 ~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~ 180 (226)
T 1a8l_A 128 AIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE 180 (226)
T ss_dssp HHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG
T ss_pred HHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc
Confidence 1112 4556588888832 345999999999987643 467777776664
No 176
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.37 E-value=0.016 Score=66.53 Aligned_cols=145 Identities=12% Similarity=0.017 Sum_probs=86.3
Q ss_pred ceecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeec
Q 005245 342 DVLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 419 (706)
Q Consensus 342 s~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVp 419 (706)
+.++||.|++.|.+.||++|.. +.|.+++++++ +++.++.|.. |+..
T Consensus 451 ~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~-------~~v~~~~vd~--------~~~~---------------- 499 (780)
T 3apo_A 451 PASDKEPWLVDFFAPWSPPSRALLPELRKASTLLY-------GQLKVGTLDC--------TIHE---------------- 499 (780)
T ss_dssp CTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTCH----------------
T ss_pred HHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEeC--------CCCH----------------
Confidence 3448999999999999998764 56777777764 3466777643 2111
Q ss_pred cCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecccHHHHHHHhCcccccCChhhHHHhhhhccc-ccccccccCCCC
Q 005245 420 HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKEETW-RIDLLADSVDPV 498 (706)
Q Consensus 420 f~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AFPFT~~r~eeL~~~e~w-~lelLvd~id~~ 498 (706)
.+.+.|++++.|++++++ +|++.... | +++.+.+.+.-++-.- ....|.+ ..
T Consensus 500 -----------~~~~~~~v~~~Pt~~~~~-~g~~~~~~--------g----~~~~~~l~~fi~~~~~~~v~~l~~---~~ 552 (780)
T 3apo_A 500 -----------GLCNMYNIQAYPTTVVFN-QSSIHEYE--------G----HHSAEQILEFIEDLRNPSVVSLTP---ST 552 (780)
T ss_dssp -----------HHHHHTTCCSSSEEEEEE-TTEEEEEC--------S----CSCHHHHHHHHHHHHSCSEEECCH---HH
T ss_pred -----------HHHHHcCCCcCCeEEEEc-CCceeeec--------C----cccHHHHHHHHHhhcccceeecCc---cc
Confidence 156778999999999994 57653211 2 2344333332211100 0011110 01
Q ss_pred ccccccC---ceEEEEEccCChhH---HHHHHHHHHHHHHHhCCceeEEEeccC
Q 005245 499 IPTWIME---QKHICLYGGEDLEW---VRKFTALMGAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 499 I~~~i~e---gK~I~LYgg~d~~W---ir~FT~~l~~I~~~~~~~~E~v~Vgkd 546 (706)
..+.+.. ++.++++|.+ .| |+++.+.+.++++.....+-++.|..+
T Consensus 553 f~~~v~~~~~~~~~lv~F~a--p~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~ 604 (780)
T 3apo_A 553 FNELVKQRKHDEVWMVDFYS--PWSHPSQVLMPEWKRMARTLTGLINVGSVDCG 604 (780)
T ss_dssp HHHHTTTCCTTCCEEEEEEC--TTCHHHHHHHHHHHHHHHHHTTTSEEEEEETT
T ss_pred HHHHhhccCCCCeEEEEEEC--CCCHHHHHhhHHHHHHHHHhhCCeEEEEEECc
Confidence 1122222 5667777777 67 688999999998875545666666544
No 177
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=96.35 E-value=0.0077 Score=58.03 Aligned_cols=68 Identities=9% Similarity=-0.019 Sum_probs=51.2
Q ss_pred ecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.+||.|+++|.+.||++|.. +.|.+++++++ +++.++.|-+ |+.
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~-------~~v~~~~vd~--------~~~------------------- 157 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVD-------GLLRIGAVNC--------GDD------------------- 157 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEET--------TTC-------------------
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhc-------CceEEEEEEC--------Ccc-------------------
Confidence 57999999999999999876 56777777663 2466666643 211
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
..+.+.|++++.|+++++ ++|+++
T Consensus 158 --------~~l~~~~~v~~~Pt~~~~-~~G~~~ 181 (210)
T 3apq_A 158 --------RMLCRMKGVNSYPSLFIF-RSGMAA 181 (210)
T ss_dssp --------HHHHHHTTCCSSSEEEEE-CTTSCC
T ss_pred --------HHHHHHcCCCcCCeEEEE-ECCCce
Confidence 135567899999999999 999874
No 178
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.31 E-value=0.0017 Score=57.78 Aligned_cols=68 Identities=19% Similarity=0.276 Sum_probs=45.4
Q ss_pred cCcEEEEEEecCCCC--------------hhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHH
Q 005245 345 RRKSVLLLVSDLDVS--------------NEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEA 408 (706)
Q Consensus 345 ~gK~VlL~fSal~~~--------------~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~ 408 (706)
+||.|+++|.+.||+ +|.. +.+.+++++.+ +++.++-|.+ |+.
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~-------~~~~~~~vd~--------d~~------ 78 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------ 78 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------------CEEEEEET--------TSC------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCC------
Confidence 489999999999999 8654 45555554442 2466666643 211
Q ss_pred hhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 409 LQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 409 ~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+ .+.+.|++++.|+++++ ++|+++.
T Consensus 79 ------------~---------~l~~~~~v~~~Pt~~~~-~~G~~~~ 103 (123)
T 1oaz_A 79 ------------P---------GTAPKYGIRGIPTLLLF-KNGEVAA 103 (123)
T ss_dssp ------------T---------TTGGGGTCCBSSEEEEE-ESSSEEE
T ss_pred ------------H---------HHHHHcCCCccCEEEEE-ECCEEEE
Confidence 1 24567899999999999 9999864
No 179
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.30 E-value=0.005 Score=55.29 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=50.5
Q ss_pred ecCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 344 LRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
+++ .|+++|.+.||++|... ...++++.+. .+ +.++.|.+-+ +.+...
T Consensus 30 ~~~-~vlv~F~a~wC~~C~~~--~p~l~~l~~~---~~--v~~~~vd~~~------~~~~~~------------------ 77 (135)
T 3emx_A 30 LQG-DAILAVYSKTCPHCHRD--WPQLIQASKE---VD--VPIVMFIWGS------LIGERE------------------ 77 (135)
T ss_dssp HTS-SEEEEEEETTCHHHHHH--HHHHHHHHTT---CC--SCEEEEEECT------TCCHHH------------------
T ss_pred hCC-cEEEEEECCcCHhhhHh--ChhHHHHHHH---CC--CEEEEEECCC------chhhhh------------------
Confidence 344 89999999999998762 3444455421 11 7777776522 112111
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 424 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 424 id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
....+.+.+.|++++.|++++++ +|+++.
T Consensus 78 --~d~~~~l~~~~~v~~~Pt~~~~~-~G~~v~ 106 (135)
T 3emx_A 78 --LSAARLEMNKAGVEGTPTLVFYK-EGRIVD 106 (135)
T ss_dssp --HHHHHHHHHHHTCCSSSEEEEEE-TTEEEE
T ss_pred --hhhhHHHHHHcCCceeCeEEEEc-CCEEEE
Confidence 12234567789999999999998 998764
No 180
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.24 E-value=0.0089 Score=58.82 Aligned_cols=70 Identities=4% Similarity=-0.086 Sum_probs=52.8
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 346 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
+|.|+++|.+.||++|.. +.+.+++++++. .+.++.++.|.+ +.++
T Consensus 30 ~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~----~~~~v~~~~vd~--------~~~~-------------------- 77 (244)
T 3q6o_A 30 RSAWAVEFFASWCGHCIAFAPTWXALAEDVKA----WRPALYLAALDC--------AEET-------------------- 77 (244)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTGG----GTTTEEEEEEET--------TSTT--------------------
T ss_pred CCeEEEEEECCcCHHHHHHHHHHHHHHHHHHh----ccCcEEEEEEeC--------Cchh--------------------
Confidence 599999999999999876 678888888863 234688888864 1111
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEECCCCc
Q 005245 424 IDPAVIRYAKEKWDFRKKPILVVLDPQGR 452 (706)
Q Consensus 424 id~~~~r~ike~~~~~~iP~LVvL~pqGk 452 (706)
-+.+.+.|++++.|+++++++.++
T Consensus 78 -----~~~l~~~~~v~~~Pt~~~~~~g~~ 101 (244)
T 3q6o_A 78 -----NSAVCRDFNIPGFPTVRFFXAFTX 101 (244)
T ss_dssp -----THHHHHHTTCCSSSEEEEECTTCC
T ss_pred -----hHHHHHHcCCCccCEEEEEeCCCc
Confidence 134667789999999999997443
No 181
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.23 E-value=0.0055 Score=52.90 Aligned_cols=69 Identities=12% Similarity=0.174 Sum_probs=46.4
Q ss_pred ecCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 344 LRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
.+||.|+++|.+.||++|.. +...++++.+. - ++.++-|.+ |+.
T Consensus 31 ~~~~~~vv~f~a~wC~~C~~--~~~~~~~~~~~---~--~~~~~~vd~--------~~~--------------------- 74 (117)
T 2xc2_A 31 HKNKLVVVDFFATWCGPCKT--IAPLFKELSEK---Y--DAIFVKVDV--------DKL--------------------- 74 (117)
T ss_dssp TTTSCEEEEEECTTCHHHHH--HHHHHHHHHTT---S--SSEEEEEET--------TTS---------------------
T ss_pred CCCCEEEEEEECCCCHhHHH--HhHHHHHHHHH---c--CcEEEEEEC--------Ccc---------------------
Confidence 46899999999999999875 33445555421 1 344444432 211
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 424 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 424 id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.+.+.|++++.|+++++ ++|+++.
T Consensus 75 ------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 99 (117)
T 2xc2_A 75 ------EETARKYNISAMPTFIAI-KNGEKVG 99 (117)
T ss_dssp ------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred ------HHHHHHcCCCccceEEEE-eCCcEEE
Confidence 235567899999998887 7898764
No 182
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.19 E-value=0.0094 Score=62.60 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=63.6
Q ss_pred CCCCceeecceecCcEEEEEEec-CCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhc
Q 005245 333 CPTKRKVSIDVLRRKSVLLLVSD-LDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQY 411 (706)
Q Consensus 333 g~~~~kV~Is~L~gK~VlL~fSa-l~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~ 411 (706)
+.+|+.|++++++||.|.|+|=- .++|.|-.. +.+ |.+. ..++++||=||. | +....+.|-+-.
T Consensus 11 ~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e-~~~-~~~~------~~~~~~v~gis~-D-----~~~~~~~f~~~~- 75 (322)
T 4eo3_A 11 TDEGKTFTHVDLYGKYTILFFFPKAGTSGSTRE-AVE-FSRE------NFEKAQVVGISR-D-----SVEALKRFKEKN- 75 (322)
T ss_dssp ETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHH-HHH-HHHS------CCTTEEEEEEES-C-----CHHHHHHHHHHH-
T ss_pred CCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHH-HHH-HHHH------hhCCCEEEEEeC-C-----CHHHHHHHHHhh-
Confidence 46788999999999999999942 233334332 111 2221 345799999985 5 245567786543
Q ss_pred CCCceeeccCCCCCHHHHHHHHHhhCCC----CCcEEEEECCCCceec
Q 005245 412 MMPWFSVHHPSAIDPAVIRYAKEKWDFR----KKPILVVLDPQGRVVN 455 (706)
Q Consensus 412 ~MPWyAVpf~~~id~~~~r~ike~~~~~----~iP~LVvL~pqGkv~~ 455 (706)
.+|+--+ .|.. ..+.+.|++- .+|+..|+|++|++..
T Consensus 76 ~l~fp~l-----~D~~--~~v~~~ygv~~~~~~~r~tfiId~~G~i~~ 116 (322)
T 4eo3_A 76 DLKVTLL-----SDPE--GILHEFFNVLENGKTVRSTFLIDRWGFVRK 116 (322)
T ss_dssp TCCSEEE-----ECTT--CHHHHHTTCEETTEECCEEEEECTTSBEEE
T ss_pred CCceEEE-----EcCc--hHHHHhcCCCCCCcCccEEEEECCCCEEEE
Confidence 3443333 2322 2455667773 4688999999999963
No 183
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=96.10 E-value=0.022 Score=59.01 Aligned_cols=151 Identities=9% Similarity=0.088 Sum_probs=83.4
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 346 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
.+.++++|.+.||++|+- +.|.++.++++ +.+-+++| | .++.
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~-------~~i~f~~v---d-------~~~~------------------- 178 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFK-------GKILFIFI---D-------SDHT------------------- 178 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGT-------TTCEEEEE---C-------TTSG-------------------
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHcc-------CceEEEEe---c-------CChH-------------------
Confidence 356889999999988764 44666555554 23444444 2 2210
Q ss_pred CCHHHHHHHHHhhCCCC--CcEEEEECCCCceecccHHHHHHHhCcccccCChhhHHHhhhhc----------------c
Q 005245 424 IDPAVIRYAKEKWDFRK--KPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKEE----------------T 485 (706)
Q Consensus 424 id~~~~r~ike~~~~~~--iP~LVvL~pqGkv~~~nA~~mI~~wG~~AFPFT~~r~eeL~~~e----------------~ 485 (706)
.-+.+.+.|++++ .|++++++..+... .|..++-++|.+.+.+.-++- .
T Consensus 179 ----~~~~~~~~fgi~~~~~P~~~~~~~~~~~~---------ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~ 245 (361)
T 3uem_A 179 ----DNQRILEFFGLKKEECPAVRLITLEEEMT---------KYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPED 245 (361)
T ss_dssp ----GGHHHHHHTTCCTTTCSEEEEEECC--CC---------EECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTT
T ss_pred ----HHHHHHHHcCCCccCCccEEEEEcCCccc---------ccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcc
Confidence 0123456679987 99999998744321 122223356655555443321 1
Q ss_pred cccccccccCC-CCccccc-cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCC--ceeEEEeccC
Q 005245 486 WRIDLLADSVD-PVIPTWI-MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGI--ALEMLYVGKS 546 (706)
Q Consensus 486 w~lelLvd~id-~~I~~~i-~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~--~~E~v~Vgkd 546 (706)
|.-..+. .++ ....+.+ ..+|.++++|.+.+ ..|+++.+.+.++++.... .+-++.|..+
T Consensus 246 ~~~~~v~-~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~ 310 (361)
T 3uem_A 246 WDKQPVK-VLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310 (361)
T ss_dssp TTTSSSE-EECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred cccCCcE-EeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 1100000 000 1111223 47999999999943 3459999999999887443 3555555443
No 184
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.08 E-value=0.0062 Score=55.02 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=43.8
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.++.++. .+ +.|+-+ |. |+. +
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~--------~~--v~~~~v-d~-----~~~------------------~- 73 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKF--------PE--TKFVKA-IV-----NSC------------------I- 73 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHC--------SS--EEEEEE-CC-----SSS------------------C-
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHC--------CC--cEEEEE-Eh-----hcC------------------c-
Confidence 3689999999999999876 3455544432 12 555544 21 111 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.|++++.|+++++. +|+++.
T Consensus 74 -----------~~~~i~~~Pt~~~~~-~G~~v~ 94 (135)
T 2dbc_A 74 -----------EHYHDNCLPTIFVYK-NGQIEG 94 (135)
T ss_dssp -----------SSCCSSCCSEEEEES-SSSCSE
T ss_pred -----------ccCCCCCCCEEEEEE-CCEEEE
Confidence 367999999999997 998875
No 185
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.01 E-value=0.0074 Score=58.89 Aligned_cols=68 Identities=19% Similarity=0.281 Sum_probs=50.3
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.+++++++ +++.++.|.+ |.. +
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--------d~~------------------~- 74 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--------DQN------------------P- 74 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--------TTC------------------T-
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--------CCC------------------H-
Confidence 4899999999999999876 56888777764 2377777754 211 1
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.|++++.|+++++. +|+++.
T Consensus 75 --------~l~~~~~v~~~Pt~~~~~-~G~~~~ 98 (222)
T 3dxb_A 75 --------GTAPKYGIRGIPTLLLFK-NGEVAA 98 (222)
T ss_dssp --------TTGGGGTCCSBSEEEEEE-TTEEEE
T ss_pred --------HHHHHcCCCcCCEEEEEE-CCeEEE
Confidence 134578999999999995 888764
No 186
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=95.98 E-value=0.018 Score=55.39 Aligned_cols=71 Identities=13% Similarity=0.119 Sum_probs=53.4
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.|.++.++++. ...++.++.|-+ |+.
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~----~~~~v~~~~vd~--------~~~-------------------- 193 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSK----RSPPIPLAKVDA--------TAE-------------------- 193 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHT----SSSCCCEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhc----cCCcEEEEEEEC--------CCC--------------------
Confidence 4689999999999999865 689999988873 344577777743 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+.+.+.|++++.|+++++. +|+.+.
T Consensus 194 -------~~l~~~~~v~~~Pt~~~~~-~g~~~~ 218 (241)
T 3idv_A 194 -------TDLAKRFDVSGYPTLKIFR-KGRPYD 218 (241)
T ss_dssp -------HHHHHHTTCCSSSEEEEEE-TTEEEE
T ss_pred -------HHHHHHcCCcccCEEEEEE-CCeEEE
Confidence 1267788999999999997 477653
No 187
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=95.95 E-value=0.029 Score=53.79 Aligned_cols=71 Identities=8% Similarity=0.033 Sum_probs=49.9
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.++.++++|.+.||++|.. +.|.+++++.+. +..+++.++.|-+ |+.
T Consensus 133 ~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~---~~~~~v~~~~vd~--------~~~-------------------- 181 (226)
T 1a8l_A 133 DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTK---AGKGKILGDMVEA--------IEY-------------------- 181 (226)
T ss_dssp CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHH---TTCCCEEEEEEEG--------GGC--------------------
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHhccc---ccCCcEEEEEEEc--------ccC--------------------
Confidence 3556699999999999876 678888887752 1234677777643 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
..+.+.|++++.|+++++ ++|+.+
T Consensus 182 -------~~l~~~~~v~~~Pt~~~~-~~G~~~ 205 (226)
T 1a8l_A 182 -------PEWADQYNVMAVPKIVIQ-VNGEDR 205 (226)
T ss_dssp -------HHHHHHTTCCSSCEEEEE-ETTEEE
T ss_pred -------HHHHHhCCCcccCeEEEE-eCCcee
Confidence 125567899999998887 588765
No 188
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=95.85 E-value=0.011 Score=52.26 Aligned_cols=76 Identities=8% Similarity=0.145 Sum_probs=49.9
Q ss_pred cCcEEEEEEecC-------CCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCc
Q 005245 345 RRKSVLLLVSDL-------DVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPW 415 (706)
Q Consensus 345 ~gK~VlL~fSal-------~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPW 415 (706)
+||.|+++|.+. ||++|.. +.|.+++++++ +++.++.|.+ ++. .. |
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~-------~~~--~~---------~ 77 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS-------EGCVFIYCQV-------GEK--PY---------W 77 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC-------TTEEEEEEEC-------CCH--HH---------H
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC-------CCcEEEEEEC-------CCc--hh---------h
Confidence 489999999999 9999876 45665554432 3577777755 111 11 2
Q ss_pred eeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 416 FSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 416 yAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
. +. . ..+.+.|+++++|+++++++.+++..
T Consensus 78 ~-----d~-~----~~~~~~~~i~~~Pt~~~~~~~~~~~g 107 (123)
T 1wou_A 78 K-----DP-N----NDFRKNLKVTAVPTLLKYGTPQKLVE 107 (123)
T ss_dssp H-----CT-T----CHHHHHHCCCSSSEEEETTSSCEEEG
T ss_pred h-----ch-h----HHHHHHCCCCeeCEEEEEcCCceEec
Confidence 1 10 1 12445589999999999998555553
No 189
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=95.79 E-value=0.032 Score=53.96 Aligned_cols=82 Identities=12% Similarity=0.082 Sum_probs=50.7
Q ss_pred cceecCcEEEEEEecCCCChhHHHH-----HHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCc
Q 005245 341 IDVLRRKSVLLLVSDLDVSNEELFL-----LEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPW 415 (706)
Q Consensus 341 Is~L~gK~VlL~fSal~~~~~e~~~-----L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPW 415 (706)
...-+||.|+|.|.+.||++|.... ..++-+.+. ++ +|+|.+ |. |+..+-=..|
T Consensus 34 ~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~-------~~--fv~ikV-D~-----de~~~l~~~y------ 92 (173)
T 3ira_A 34 KARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN-------EA--FVSIKV-DR-----EERPDIDNIY------ 92 (173)
T ss_dssp HHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHH-------HH--CEEEEE-ET-----TTCHHHHHHH------
T ss_pred HHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHH-------hc--Cceeee-CC-----cccCcHHHHH------
Confidence 3345799999999999999998721 123333333 12 466654 42 2211111111
Q ss_pred eeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 416 FSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 416 yAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..++...+++.++|++|+++|+|+++..
T Consensus 93 -------------~~~~q~~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 93 -------------MTVCQIILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp -------------HHHHHHHHSCCCSSEEEEECTTSCEEEE
T ss_pred -------------HHHHHHHcCCCCCcceeeECCCCCceee
Confidence 1123334799999999999999999864
No 190
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=95.59 E-value=0.042 Score=47.19 Aligned_cols=69 Identities=9% Similarity=0.034 Sum_probs=48.7
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
++|.|+++|.+.||++|.. +.|.+++++++.. ....++.++.|-+ |+. |
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--~~~~~v~~~~vd~--------~~~-----------~-------- 74 (121)
T 2djj_A 24 DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKS--EFKDRVVIAKVDA--------TAN-----------D-------- 74 (121)
T ss_dssp TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTS--SCTTSSEEEEEET--------TTS-----------C--------
T ss_pred CCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhc--ccCCceEEEEEEC--------ccc-----------c--------
Confidence 6899999999999999876 5788888887521 0123566666633 110 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCce
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRV 453 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv 453 (706)
+ .+ ++++.|+++++++.|++
T Consensus 75 -~--------~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 75 -V--------PD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp -C--------SS--CCSSSSEEEEECSSCTT
T ss_pred -c--------cc--ccCcCCeEEEEeCcCCC
Confidence 1 11 88999999999998883
No 191
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=95.38 E-value=0.013 Score=47.12 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=44.1
Q ss_pred cEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCC
Q 005245 347 KSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAI 424 (706)
Q Consensus 347 K~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~i 424 (706)
+.++++|++.||++|.. +.|.++.++.. ++++++.|.+ |++ +
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~~------------------~--- 46 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-------DAVEVEYINV--------MEN------------------P--- 46 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-------SSEEEEEEES--------SSS------------------C---
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-------CceEEEEEEC--------CCC------------------H---
Confidence 46789999999988765 56777666542 4688888865 211 1
Q ss_pred CHHHHHHHHHhhCCCCCcEEEEECCCCce
Q 005245 425 DPAVIRYAKEKWDFRKKPILVVLDPQGRV 453 (706)
Q Consensus 425 d~~~~r~ike~~~~~~iP~LVvL~pqGkv 453 (706)
.+.+.|++++.|++++ +|++
T Consensus 47 ------~~~~~~~v~~~Pt~~~---~G~~ 66 (85)
T 1fo5_A 47 ------QKAMEYGIMAVPTIVI---NGDV 66 (85)
T ss_dssp ------CTTTSTTTCCSSEEEE---TTEE
T ss_pred ------HHHHHCCCcccCEEEE---CCEE
Confidence 1335679999999999 8886
No 192
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=94.28 E-value=0.003 Score=52.36 Aligned_cols=68 Identities=19% Similarity=0.312 Sum_probs=45.8
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||+.|.. +.|.++.++.+ +++.++.|.+ |++
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--------~~~-------------------- 62 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYE-------GKVKVVKVNV--------DEN-------------------- 62 (106)
Confidence 4789999999999999876 45655555543 2344444432 111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 63 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 87 (106)
T 2yj7_A 63 -------PNTAAQYGIRSIPTLLLF-KNGQVVD 87 (106)
Confidence 123456788999999999 8898753
No 193
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=95.29 E-value=0.016 Score=46.58 Aligned_cols=60 Identities=10% Similarity=0.155 Sum_probs=43.5
Q ss_pred EEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCCCH
Q 005245 349 VLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAIDP 426 (706)
Q Consensus 349 VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~id~ 426 (706)
+.++|++.||++|.. +.|.++.++.. ++++++.|.+ |++.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--------~~~~----------------------- 45 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFG-------DKIDVEKIDI--------MVDR----------------------- 45 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHC-------SSCCEEEECT--------TTCG-----------------------
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhc-------CCeEEEEEEC--------CCCH-----------------------
Confidence 578899999988765 56777776663 3588888854 2111
Q ss_pred HHHHHHHHhhCCCCCcEEEEECCCCce
Q 005245 427 AVIRYAKEKWDFRKKPILVVLDPQGRV 453 (706)
Q Consensus 427 ~~~r~ike~~~~~~iP~LVvL~pqGkv 453 (706)
.+.+.|++++.|++++ +|++
T Consensus 46 ----~~~~~~~v~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 46 ----EKAIEYGLMAVPAIAI---NGVV 65 (85)
T ss_dssp ----GGGGGTCSSCSSEEEE---TTTE
T ss_pred ----HHHHhCCceeeCEEEE---CCEE
Confidence 2446789999999999 8886
No 194
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=94.99 E-value=0.046 Score=61.10 Aligned_cols=71 Identities=4% Similarity=-0.012 Sum_probs=54.1
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 346 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
||.|+++|.|.||++|.. +.+.+++++++. .+..+.++-|-+ |.|+
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~----~~~~v~~~~VD~--------d~d~-------------------- 77 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPTWKELANDVKD----WRPALNLAVLDC--------AEET-------------------- 77 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGG----GTTTEEEEEEET--------TSGG--------------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhC----cCCcEEEEEEEC--------Cccc--------------------
Confidence 599999999999999776 689999999863 234688888754 2111
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEECC---CCce
Q 005245 424 IDPAVIRYAKEKWDFRKKPILVVLDP---QGRV 453 (706)
Q Consensus 424 id~~~~r~ike~~~~~~iP~LVvL~p---qGkv 453 (706)
-+.+.+.|++++.|+++++++ +|+.
T Consensus 78 -----~~~l~~~~~V~~~PTl~~f~~g~~~G~~ 105 (519)
T 3t58_A 78 -----NSAVCREFNIAGFPTVRFFQAFTKNGSG 105 (519)
T ss_dssp -----GHHHHHHTTCCSBSEEEEECTTCCSCCC
T ss_pred -----cHHHHHHcCCcccCEEEEEcCcccCCCc
Confidence 134667889999999999997 6653
No 195
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=94.89 E-value=0.039 Score=53.73 Aligned_cols=101 Identities=10% Similarity=-0.002 Sum_probs=65.4
Q ss_pred CCceeeccee-cCcEEEE-EEecCCCChh---HHHHHHHHHHHHhhcccCCCCCe-EEEEEecccCCCCcChhhHHHHHH
Q 005245 335 TKRKVSIDVL-RRKSVLL-LVSDLDVSNE---ELFLLEQMYRESRQLSSRTESQY-EVVWLPIVDRSTPWTEAKEHKFEA 408 (706)
Q Consensus 335 ~~~kV~Is~L-~gK~VlL-~fSal~~~~~---e~~~L~~iY~elk~~~~~~~~~f-EIVwIpiVd~s~~w~D~de~~Fe~ 408 (706)
.-+.|+++++ +||.|.| +|=+.|||.| |++.+.+.|+++++ .++ +||=||. | +-...+.|-+
T Consensus 35 ~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~------~g~d~VigIS~-D-----~~~~~~~f~~ 102 (176)
T 4f82_A 35 GPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRA------AGIDEIWCVSV-N-----DAFVMGAWGR 102 (176)
T ss_dssp EEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH------TTCCEEEEEES-S-----CHHHHHHHHH
T ss_pred CceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHh------CCCCEEEEEeC-C-----CHHHHHHHHH
Confidence 3478999996 9996655 5667788877 66789999999984 347 9999986 3 2345666755
Q ss_pred hhc-C--CCceeeccCCCCCHHHHHHHHHhhCCC-----------CCcEEEEECCCCceeccc
Q 005245 409 LQY-M--MPWFSVHHPSAIDPAVIRYAKEKWDFR-----------KKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 409 ~~~-~--MPWyAVpf~~~id~~~~r~ike~~~~~-----------~iP~LVvL~pqGkv~~~n 457 (706)
-.. . .|-++= ++ .+.. +.|++. ..|...|+ ++|+|....
T Consensus 103 ~~~l~~~f~lLsD--~~---~~va----~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~ 155 (176)
T 4f82_A 103 DLHTAGKVRMMAD--GS---AAFT----HALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLA 155 (176)
T ss_dssp HTTCTTTSEEEEC--TT---CHHH----HHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEE
T ss_pred HhCCCCCceEEEc--Cc---hHHH----HHhCCCccccccCCCcccccEEEEE-cCCEEEEEE
Confidence 332 1 333321 21 2333 334441 25778888 999997554
No 196
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=94.71 E-value=0.006 Score=53.12 Aligned_cols=67 Identities=9% Similarity=0.141 Sum_probs=47.0
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.+++++.+ ++.++.|.+ |+.
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--------~~~-------------------- 78 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--------GAVFLKVDV--------DEL-------------------- 78 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--------TBCCEECCT--------TTS--------------------
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CCEEEEEec--------cch--------------------
Confidence 4899999999999988764 56777666542 355555532 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|++++.|+++++ ++|+++.
T Consensus 79 -------~~~~~~~~v~~~Pt~~~~-~~g~~~~ 103 (130)
T 1wmj_A 79 -------KEVAEKYNVEAMPTFLFI-KDGAEAD 103 (130)
T ss_dssp -------GGGHHHHTCCSSCCCCBC-TTTTCCB
T ss_pred -------HHHHHHcCCCccceEEEE-eCCeEEE
Confidence 124566799999998887 8998764
No 197
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=94.57 E-value=0.097 Score=49.17 Aligned_cols=71 Identities=17% Similarity=0.131 Sum_probs=48.5
Q ss_pred cCc-EEEEEEecCCC--ChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 345 RRK-SVLLLVSDLDV--SNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 345 ~gK-~VlL~fSal~~--~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.++ .|++.|.|.|| +||.. +..+.+++.+. -++++.|+-|=+ |+.
T Consensus 31 ~~~~~vlVdF~A~wCr~gpCk~--iaPvleela~e---~~~~v~~~KVdv--------De~------------------- 78 (137)
T 2qsi_A 31 HSGKIVVLFFRGDAVRFPEAAD--LAVVLPELINA---FPGRLVAAEVAA--------EAE------------------- 78 (137)
T ss_dssp TSSSEEEEEECCCTTTCTTHHH--HHHHHHHHHHT---STTTEEEEEECG--------GGH-------------------
T ss_pred cCCCcEEEEEeCCccCCCchhh--HHhHHHHHHHH---ccCCcEEEEEEC--------CCC-------------------
Confidence 344 99999999999 88875 34444555431 245788888732 221
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
+.+.++|+++++|+|+++ .+|+++..
T Consensus 79 --------~~la~~ygV~siPTlilF-kdG~~v~~ 104 (137)
T 2qsi_A 79 --------RGLMARFGVAVCPSLAVV-QPERTLGV 104 (137)
T ss_dssp --------HHHHHHHTCCSSSEEEEE-ECCEEEEE
T ss_pred --------HHHHHHcCCccCCEEEEE-ECCEEEEE
Confidence 235567799999999999 57877654
No 198
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=94.33 E-value=0.066 Score=49.48 Aligned_cols=66 Identities=15% Similarity=0.314 Sum_probs=38.6
Q ss_pred CcEEEEEEecCC--CChhH--HHHHHHHHHHHhhcccCCCCCeE--EEEEecccCCCCcChhhHHHHHHhhcCCCceeec
Q 005245 346 RKSVLLLVSDLD--VSNEE--LFLLEQMYRESRQLSSRTESQYE--VVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 419 (706)
Q Consensus 346 gK~VlL~fSal~--~~~~e--~~~L~~iY~elk~~~~~~~~~fE--IVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVp 419 (706)
.+.++++|++.| |++|. .|.|.+++++. +++. ++-|- -|+.
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~--------~~v~~~~~~Vd----------~d~~--------------- 80 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF--------PQFDWQVAVAD----------LEQS--------------- 80 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC--------TTSCCEEEEEC----------HHHH---------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh--------cccceeEEEEE----------CCCC---------------
Confidence 355888999887 77765 35666655543 2355 66652 2221
Q ss_pred cCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 420 HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 420 f~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.|+++++|+++++ .+|+++.
T Consensus 81 ----------~~la~~~~V~~iPT~~~f-k~G~~v~ 105 (142)
T 2es7_A 81 ----------EAIGDRFNVRRFPATLVF-TDGKLRG 105 (142)
T ss_dssp ----------HHHHHTTTCCSSSEEEEE-SCC----
T ss_pred ----------HHHHHhcCCCcCCeEEEE-eCCEEEE
Confidence 235678899999999999 8998763
No 199
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=94.24 E-value=0.045 Score=58.99 Aligned_cols=67 Identities=7% Similarity=0.057 Sum_probs=48.6
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.||.|+++|.|.||++|.. +.|.+++++.+. ..++.++.|-. +.. .
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~-----~~~v~~~~id~----------~~~-------~---------- 416 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSK-----DPNIVIAKMDA----------TAN-------D---------- 416 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTT-----CSSEEEEEEET----------TSS-------C----------
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhcc-----CCCEEEEEEEC----------Cch-------h----------
Confidence 3899999999999999876 678888888752 23555555522 110 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCc
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGR 452 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGk 452 (706)
+.+.|++++.|+++++++.|+
T Consensus 417 ---------~~~~~~v~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 417 ---------VPSPYEVRGFPTIYFSPANKK 437 (481)
T ss_dssp ---------CCTTCCCCSSSEEEEECTTCT
T ss_pred ---------hHhhCCCcccCEEEEEeCCCe
Confidence 114579999999999998887
No 200
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.21 E-value=0.066 Score=55.15 Aligned_cols=74 Identities=11% Similarity=0.060 Sum_probs=50.7
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.+.+++++++ +.+.|+.|-+ |.++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~-------~~~~~~~v~~--------d~~~------------------- 79 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLD-------GVVQVAAVNC--------DLNK------------------- 79 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--------TSTT-------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCcEEEEEEc--------cCcc-------------------
Confidence 3788999999999999876 56777777764 3488888865 2111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceecccH
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNA 458 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA 458 (706)
-+.+.+.|++++.|+++++++.+.+....+
T Consensus 80 ------~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g 109 (298)
T 3ed3_A 80 ------NKALCAKYDVNGFPTLMVFRPPKIDLSKPI 109 (298)
T ss_dssp ------THHHHHHTTCCBSSEEEEEECCCC------
T ss_pred ------CHHHHHhCCCCccceEEEEECCceeecccc
Confidence 134567789999999999987554444333
No 201
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=93.81 E-value=0.16 Score=47.82 Aligned_cols=70 Identities=11% Similarity=0.079 Sum_probs=48.1
Q ss_pred cCcEEEEEEecCC--CChhHHHHHHHHHHHHhhcccCCCCC-eEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 345 RRKSVLLLVSDLD--VSNEELFLLEQMYRESRQLSSRTESQ-YEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 345 ~gK~VlL~fSal~--~~~~e~~~L~~iY~elk~~~~~~~~~-fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
.++.|+++|.+.| |+||.. +..+.+++.+. -+++ +.|+-| |-|+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~--iaPvleela~e---~~g~~v~~~KV----------dvDe------------------ 79 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSD--NPVMIGELLHE---FPDYTWQVAIA----------DLEQ------------------ 79 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTH--HHHHHHHHHTT---CTTSCCEEEEC----------CHHH------------------
T ss_pred CCCCEEEEEeCCcccCCcHHH--HHhHHHHHHHH---cCCCeEEEEEE----------ECCC------------------
Confidence 4567999999999 788854 55566666531 2345 777766 2222
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
-..|..+|+++++|+|+++ .+|+++.
T Consensus 80 -------~~~lA~~ygV~sIPTlilF-k~G~~v~ 105 (140)
T 2qgv_A 80 -------SEAIGDRFGAFRFPATLVF-TGGNYRG 105 (140)
T ss_dssp -------HHHHHHHHTCCSSSEEEEE-ETTEEEE
T ss_pred -------CHHHHHHcCCccCCEEEEE-ECCEEEE
Confidence 2335677899999999999 5888764
No 202
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=93.77 E-value=1.1 Score=42.90 Aligned_cols=43 Identities=7% Similarity=-0.153 Sum_probs=29.9
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
.++.+.++|.+.+ ..|+++.+.+.+++++. ..+.++.|.-+..
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~ 178 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASEN 178 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCC
Confidence 4566688888832 34599999999998874 3677777765543
No 203
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=93.70 E-value=0.051 Score=55.23 Aligned_cols=90 Identities=14% Similarity=0.202 Sum_probs=54.8
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
+||.|+++|.+.||++|.. +.|.+++.+.. + |.|+-| |.+.. .
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--------~--v~f~kV--------d~d~~---~-------------- 176 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP--------M--VKFCKI--------KASNT---G-------------- 176 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--------T--SEEEEE--------EHHHH---C--------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------C--CEEEEE--------eCCcH---H--------------
Confidence 4899999999999999987 45665555431 2 444443 22221 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceecccHHHHHHHhCcccccCChhhHHHhhhh
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWKE 483 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AFPFT~~r~eeL~~~ 483 (706)
+.+.|++++.|+++++. +|+++.. -++.....|. -|+.+.++.+-.+
T Consensus 177 ---------l~~~~~I~~~PTll~~~-~G~~v~~-~vG~~~~~g~---~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 177 ---------AGDRFSSDVLPTLLVYK-GGELLSN-FISVTEQLAE---EFFTGDVESFLNE 223 (245)
T ss_dssp ---------CTTSSCTTTCSEEEEEE-TTEEEEE-ETTGGGGSCT---TCCHHHHHHHHHT
T ss_pred ---------HHHHCCCCCCCEEEEEE-CCEEEEE-EeCCcccccc---cccHHHHHHHHHH
Confidence 12457999999999886 8988742 2222222221 2666666655544
No 204
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=93.50 E-value=0.24 Score=49.28 Aligned_cols=71 Identities=10% Similarity=0.088 Sum_probs=47.4
Q ss_pred eecCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeecc
Q 005245 343 VLRRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHH 420 (706)
Q Consensus 343 ~L~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf 420 (706)
.++|+.+.+.|.+.||++|.. +.|.+++.+.+. +...++.++-|-+ +. +
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~---~~~~~v~~~~vd~--------~~------------------~ 185 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWK---QGNPVILSEAVEA--------YE------------------N 185 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHH---TTCCCEEEEEEET--------TT------------------C
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHccc---ccCCcEEEEEEEC--------cc------------------C
Confidence 467889999999999999875 566666666531 0113566665522 11 1
Q ss_pred CCCCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 421 PSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 421 ~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
..+.+.|++++.|++++ +|+++
T Consensus 186 ---------~~~~~~~~V~~vPt~~i---~G~~~ 207 (243)
T 2hls_A 186 ---------PDIADKYGVMSVPSIAI---NGYLV 207 (243)
T ss_dssp ---------HHHHHHTTCCSSSEEEE---TTEEE
T ss_pred ---------HHHHHHcCCeeeCeEEE---CCEEE
Confidence 12456789999999998 78764
No 205
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=93.45 E-value=0.22 Score=39.32 Aligned_cols=59 Identities=12% Similarity=0.017 Sum_probs=40.1
Q ss_pred EEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCCCHH
Q 005245 350 LLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAIDPA 427 (706)
Q Consensus 350 lL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~id~~ 427 (706)
-+.|.+.||++|.. +.|.++.++.. .+++++-| | + .
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~-------~~~~~~~v----------~---------------------~---~- 40 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELG-------IDAEFEKI----------K---------------------E---M- 40 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTT-------CCEEEEEE----------C---------------------S---H-
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcC-------CceEEEEe----------c---------------------C---H-
Confidence 35666779999876 45766666553 35666655 2 0 1
Q ss_pred HHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 428 VIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 428 ~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
.+.+.|++++.|++++ +|+++..
T Consensus 41 ---~~~~~~~v~~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 41 ---DQILEAGLTALPGLAV---DGELKIM 63 (77)
T ss_dssp ---HHHHHHTCSSSSCEEE---TTEEEEC
T ss_pred ---HHHHHCCCCcCCEEEE---CCEEEEc
Confidence 2345679999999999 8988754
No 206
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=93.08 E-value=0.13 Score=50.82 Aligned_cols=91 Identities=11% Similarity=0.143 Sum_probs=56.4
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCC
Q 005245 345 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAI 424 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~i 424 (706)
+||.|+++|.+.||++|.. +..+++++.+. -.++.++-|.+ + +.
T Consensus 119 ~~k~vvV~F~a~wC~~C~~--l~p~l~~la~~----~~~v~f~~vd~----------~----~~---------------- 162 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDA--LNSSLECLAAE----YPMVKFCKIRA----------S----NT---------------- 162 (217)
T ss_dssp TTCEEEEEEECTTSTTHHH--HHHHHHHHHTT----CTTSEEEEEEH----------H----HH----------------
T ss_pred CCcEEEEEEECCCCccHHH--HHHHHHHHHHH----CCCeEEEEEEC----------C----cH----------------
Confidence 4689999999999999986 45556666532 12455555532 2 10
Q ss_pred CHHHHHHHHHhhCCCCCcEEEEECCCCceecccHHHHHHHhCcccccCChhhHHHhhh
Q 005245 425 DPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWK 482 (706)
Q Consensus 425 d~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AFPFT~~r~eeL~~ 482 (706)
.+.+.|++++.|+++++. +|+++.. -.+.....|. -|+.+.++.+-.
T Consensus 163 ------~l~~~~~i~~~PTl~~~~-~G~~v~~-~~G~~~~~g~---~~~~~~Le~~L~ 209 (217)
T 2trc_P 163 ------GAGDRFSSDVLPTLLVYK-GGELISN-FISVAEQFAE---DFFAADVESFLN 209 (217)
T ss_dssp ------TCSTTSCGGGCSEEEEEE-TTEEEEE-ETTGGGGSCS---SCCHHHHHHHHH
T ss_pred ------HHHHHCCCCCCCEEEEEE-CCEEEEE-EeCCcccCcc---cCCHHHHHHHHH
Confidence 122457899999999995 8988742 2232233342 366666665543
No 207
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=93.07 E-value=0.11 Score=59.75 Aligned_cols=67 Identities=9% Similarity=-0.045 Sum_probs=50.6
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.||.|+++|.+.||++|.. +.|.+++++.+ +++.+++|-+ |+.
T Consensus 674 ~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~-------~~~~~~~vd~--------~~~-------------------- 718 (780)
T 3apo_A 674 GKTHWVVDFYAPWSGPSQNFAPEFELLARMIK-------GKVRAGKVDC--------QAY-------------------- 718 (780)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--------TTC--------------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCceEEEEEC--------CCC--------------------
Confidence 4799999999999999865 67888887774 2577777743 211
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
..+.+.|++++.|+++++ ++|+++
T Consensus 719 -------~~~~~~~~v~~~Pt~~~~-~~g~~~ 742 (780)
T 3apo_A 719 -------PQTCQKAGIKAYPSVKLY-QYERAK 742 (780)
T ss_dssp -------HHHHHHTTCCSSSEEEEE-EEETTT
T ss_pred -------HHHHHhcCCCcCCEEEEE-cCCCcc
Confidence 125567899999999999 888865
No 208
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=93.06 E-value=0.27 Score=44.79 Aligned_cols=70 Identities=14% Similarity=0.201 Sum_probs=52.1
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 346 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
+|.|+++|.+.||++|.. +.+.+..++ ++..++.|=+ |+
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~---------~~v~~~~vdV--------de---------------------- 64 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE---------RDMDGYYLIV--------QQ---------------------- 64 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH---------HTCCEEEEEG--------GG----------------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc---------CCceEEEEEe--------ec----------------------
Confidence 789999999999999876 456655542 2466777732 21
Q ss_pred CCHHHHHHHHHhhCCCC-CcEEEEECCCCceecc
Q 005245 424 IDPAVIRYAKEKWDFRK-KPILVVLDPQGRVVNQ 456 (706)
Q Consensus 424 id~~~~r~ike~~~~~~-iP~LVvL~pqGkv~~~ 456 (706)
.+++-..|.++|++++ .|.++++ .+|+++-.
T Consensus 65 -~r~~Sn~IA~~~~V~h~sPq~il~-k~G~~v~~ 96 (112)
T 3iv4_A 65 -ERDLSDYIAKKTNVKHESPQAFYF-VNGEMVWN 96 (112)
T ss_dssp -GHHHHHHHHHHHTCCCCSSEEEEE-ETTEEEEE
T ss_pred -CchhhHHHHHHhCCccCCCeEEEE-ECCEEEEE
Confidence 2356778999999995 9999999 68887743
No 209
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=92.84 E-value=0.52 Score=44.48 Aligned_cols=72 Identities=11% Similarity=0.228 Sum_probs=46.7
Q ss_pred cCcEEEEEEecCCCChhHHHH-----HHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeec
Q 005245 345 RRKSVLLLVSDLDVSNEELFL-----LEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 419 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~~~-----L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVp 419 (706)
+||.|+|+|.+.||..|.... =.+|-+.+++ +| |+|-+ |. ++
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-------~f--v~v~~-d~----~~------------------- 87 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-------HF--IFWQV-YH----DS------------------- 87 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-------TE--EEEEE-ES----SS-------------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-------Ce--EEEEE-ec----CC-------------------
Confidence 389999999999999987631 1334444432 24 44432 21 11
Q ss_pred cCCCCCHHHHHHHHHhhCCCCCcEEEEECCC-Cceecc
Q 005245 420 HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQ-GRVVNQ 456 (706)
Q Consensus 420 f~~~id~~~~r~ike~~~~~~iP~LVvL~pq-Gkv~~~ 456 (706)
.+. +.+.+.|++.+.|+++++||+ |+.+..
T Consensus 88 ------~~~-~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 88 ------EEG-QRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp ------HHH-HHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred ------HhH-HHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 112 234468899999999999999 877643
No 210
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=92.43 E-value=0.35 Score=46.46 Aligned_cols=63 Identities=6% Similarity=-0.004 Sum_probs=42.1
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.++.++++|.+.||++|.. +.|.++.++. +++.++.|-+ |+.
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~--------~~v~~~~vd~--------~~~-------------------- 178 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN--------DYITSKVIDA--------SEN-------------------- 178 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC--------TTEEEEEEEG--------GGC--------------------
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC--------CCeEEEEEEC--------CCC--------------------
Confidence 3556688999999999865 3454444432 2566666643 221
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCce
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRV 453 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv 453 (706)
..+.+.|++++.|++++ +|++
T Consensus 179 -------~~l~~~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 179 -------QDLAEQFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp -------HHHHHHTTCCSSSEEEE---GGGT
T ss_pred -------HHHHHHcCCcccCEEEE---CCEE
Confidence 12566789999999999 7774
No 211
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=92.04 E-value=0.13 Score=53.17 Aligned_cols=40 Identities=5% Similarity=0.042 Sum_probs=29.6
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEE
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWL 389 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwI 389 (706)
.+|.|+++|.+.||++|.. +.|.++.++++. ..++.++.|
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~-----~~~v~~~~v 307 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKD-----HENIVIAKM 307 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-----CSSEEEEEE
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhcc-----CCcEEEEEE
Confidence 5899999999999999876 567777777752 234555555
No 212
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=91.22 E-value=0.37 Score=41.29 Aligned_cols=68 Identities=13% Similarity=0.115 Sum_probs=41.6
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCC
Q 005245 345 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAI 424 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~i 424 (706)
++|.|.+ |++.||++|.. +..+++++. ..|++|-|-. +.+.
T Consensus 18 ~~~~vv~-f~a~~C~~C~~--~~~~l~~~~-------~~~~~v~v~~--------~~~~--------------------- 58 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNR--VKQLLTQVG-------ASYKVVELDE--------LSDG--------------------- 58 (116)
T ss_dssp TSSSEEE-EECTTCHHHHH--HHHHHHHHT-------CCCEEEEGGG--------STTH---------------------
T ss_pred cCCCEEE-EECCCChhHHH--HHHHHHHcC-------CCeEEEEccC--------CCCh---------------------
Confidence 4566655 99999999975 334445553 2365544311 1111
Q ss_pred CHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 425 DPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 425 d~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
.+....+.+.+++++.|++ ++ +|+.+.
T Consensus 59 -~~~~~~l~~~~~v~~~Pt~-~~--~g~~v~ 85 (116)
T 2e7p_A 59 -SQLQSALAHWTGRGTVPNV-FI--GGKQIG 85 (116)
T ss_dssp -HHHHHHHHHHHSCCSSCEE-EE--TTEEEE
T ss_pred -HHHHHHHHHHhCCCCcCEE-EE--CCEEEC
Confidence 1234567788999999999 44 687764
No 213
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=91.00 E-value=0.069 Score=48.72 Aligned_cols=73 Identities=12% Similarity=0.095 Sum_probs=46.0
Q ss_pred ecCcEEEEEEecCCCChhHHHH--HHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccC
Q 005245 344 LRRKSVLLLVSDLDVSNEELFL--LEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHP 421 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~~~--L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~ 421 (706)
-+.+.++++|.+.||++|.... +.+.|.... ....+.++.|=+ +++. | +
T Consensus 16 ~~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a-----~~~~~~l~~vdv--------~~~~----------~------~ 66 (116)
T 3dml_A 16 DKAELRLLMFEQPGCLYCARWDAEIAPQYPLTD-----EGRAAPVQRLQM--------RDPL----------P------P 66 (116)
T ss_dssp ---CEEEEEEECTTCHHHHHHHHHTTTTGGGSH-----HHHHSCEEEEET--------TSCC----------C------T
T ss_pred ccCCCEEEEEECCCCHHHHHHHHHHHhhHHHhh-----hcccceEEEEEC--------CCCC----------c------h
Confidence 3557899999999999998743 334444321 122477888855 1110 0 1
Q ss_pred CCCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 422 SAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 422 ~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+ +...+++.++|+||+++ +|+.+.
T Consensus 67 ~---------la~~~~V~g~PT~i~f~-~G~ev~ 90 (116)
T 3dml_A 67 G---------LELARPVTFTPTFVLMA-GDVESG 90 (116)
T ss_dssp T---------CBCSSCCCSSSEEEEEE-TTEEEE
T ss_pred h---------HHHHCCCCCCCEEEEEE-CCEEEe
Confidence 1 11345789999999999 999876
No 214
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=90.89 E-value=0.3 Score=54.34 Aligned_cols=69 Identities=9% Similarity=-0.008 Sum_probs=47.6
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCC----CCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeec
Q 005245 346 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTE----SQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 419 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~----~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVp 419 (706)
+|.|+++|.|.||++|.. |.+.+++++++.. .+ +++.++=|-+ |+.
T Consensus 42 ~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~---~g~~~~~~v~f~~VD~--------d~~----------------- 93 (470)
T 3qcp_A 42 LCPWIVLFYNDGCGACRRYASTFSKFAGGLKVE---HGKDALQIATAAAVNC--------ASE----------------- 93 (470)
T ss_dssp GSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCS---SCSSGGGGCEEEEEET--------TTC-----------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhh---cccccCceEEEEEEEC--------CCC-----------------
Confidence 478999999999999876 5677777776421 11 1355554422 211
Q ss_pred cCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCc
Q 005245 420 HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGR 452 (706)
Q Consensus 420 f~~~id~~~~r~ike~~~~~~iP~LVvL~pqGk 452 (706)
+.+.+.|++++.|+++++++.|.
T Consensus 94 ----------~~la~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 94 ----------VDLCRKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp ----------HHHHHHTTCCSSCEEEEEEESSC
T ss_pred ----------HHHHHHcCCCccCeEEEEECCCc
Confidence 13567789999999999987664
No 215
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=90.40 E-value=0.79 Score=40.20 Aligned_cols=59 Identities=12% Similarity=0.145 Sum_probs=44.0
Q ss_pred CCCccccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhC--CceeEEEeccCCchhhhhhhh
Q 005245 496 DPVIPTWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAG--IALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 496 d~~I~~~i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~--~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
...+.+. .||.+.|||.+.+ ..|+.+.+.+.+++++.+ ..++++.|+.|...+.+++.+
T Consensus 20 ~~~l~~~--~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~ 81 (144)
T 1o73_A 20 EVSLGSL--VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYY 81 (144)
T ss_dssp CBCSGGG--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHH
T ss_pred cCcHHHh--CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHH
Confidence 3344444 7999999999842 335888899998877644 689999999997766666544
No 216
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=90.22 E-value=0.43 Score=51.34 Aligned_cols=65 Identities=14% Similarity=0.060 Sum_probs=45.4
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 346 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
|+.|+++|.+.||++|.. +.+.++.++++. . |.++-+ |. |++
T Consensus 21 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~-------~--v~~~~v-d~-----~~~--------------------- 64 (481)
T 3f8u_A 21 AGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG-------I--VPLAKV-DC-----TAN--------------------- 64 (481)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-------T--CCEEEE-ET-----TTC---------------------
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC-------c--eEEEEE-EC-----CCC---------------------
Confidence 489999999999999876 567777777751 2 444433 21 111
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEECCCCce
Q 005245 424 IDPAVIRYAKEKWDFRKKPILVVLDPQGRV 453 (706)
Q Consensus 424 id~~~~r~ike~~~~~~iP~LVvL~pqGkv 453 (706)
+.+.++|++++.|+++++ .+|+.
T Consensus 65 ------~~l~~~~~v~~~Ptl~~~-~~g~~ 87 (481)
T 3f8u_A 65 ------TNTCNKYGVSGYPTLKIF-RDGEE 87 (481)
T ss_dssp ------HHHHHHTTCCEESEEEEE-ETTEE
T ss_pred ------HHHHHhcCCCCCCEEEEE-eCCce
Confidence 235678899999999999 56754
No 217
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=89.85 E-value=0.43 Score=42.16 Aligned_cols=52 Identities=15% Similarity=0.178 Sum_probs=41.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhC--CceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAG--IALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~--~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|||.+.+ ..|+.+.+.+.+++++.+ ..++++.|+.|...+.+++.+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYY 81 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHH
Confidence 7999999999932 335888999999887654 589999999997777766654
No 218
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=89.81 E-value=0.45 Score=42.26 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=41.5
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhC--CceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAG--IALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~--~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|||.+.+ ..|+.+.+.+.+++++.+ ..+++++|+.|...+.+++.+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYF 81 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHH
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHH
Confidence 7999999999942 335889999999987644 589999999997777766654
No 219
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=89.45 E-value=0.02 Score=50.32 Aligned_cols=35 Identities=6% Similarity=-0.032 Sum_probs=26.6
Q ss_pred eeecceecCcEEEEEEecCCCChhHHHHHHHHHHHHh
Q 005245 338 KVSIDVLRRKSVLLLVSDLDVSNEELFLLEQMYRESR 374 (706)
Q Consensus 338 kV~Is~L~gK~VlL~fSal~~~~~e~~~L~~iY~elk 374 (706)
++.++...||.+.+.|.+.||++|.. +..+++++.
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~--~~p~~~~~a 38 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQD--QKELFGAAF 38 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHH--HHHHHGGGG
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHH--HHHHHHHHH
Confidence 45566777899999999999999976 345566654
No 220
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=89.41 E-value=0.63 Score=41.10 Aligned_cols=53 Identities=6% Similarity=-0.111 Sum_probs=40.6
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRIIS 557 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~~ 557 (706)
.||.+.|+|.+.+ ..|+...+.+.+++++. +..++++.|+.|...+.+++.++
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 85 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVK 85 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHH
Confidence 8999999999832 33578888888887763 35799999999977777666553
No 221
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=89.27 E-value=0.5 Score=49.73 Aligned_cols=74 Identities=15% Similarity=0.195 Sum_probs=49.7
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.+.++.+++++.. ...++ |+++-+ | .+ .
T Consensus 21 ~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~-~~~~~--v~~~~V-d-------~~-------------------~ 70 (382)
T 2r2j_A 21 NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEF-PNENQ--VVFARV-D-------CD-------------------Q 70 (382)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC----CC--EEEEEE-E-------TT-------------------T
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhc-CCCCc--eEEEEE-E-------CC-------------------c
Confidence 5799999999999999876 57888888886310 00223 444443 2 11 0
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+ +.+.++|++++.|+++++ .+|+++.
T Consensus 71 --~----~~l~~~~~v~~~Pt~~~f-~~G~~~~ 96 (382)
T 2r2j_A 71 --H----SDIAQRYRISKYPTLKLF-RNGMMMK 96 (382)
T ss_dssp --C----HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred --c----HHHHHhcCCCcCCEEEEE-eCCcEee
Confidence 1 236677899999999987 5787653
No 222
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=88.74 E-value=0.95 Score=49.09 Aligned_cols=66 Identities=8% Similarity=-0.082 Sum_probs=46.5
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+|.|+++|.+.||++|.. +.+.++.++++ +.++.++-|-+ |++
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~------~~~v~~~~vd~--------~~~-------------------- 75 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLV------EKNITLAQIDC--------TEN-------------------- 75 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTT------TTTCEEEEEET--------TTC--------------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhc------cCCeEEEEEEC--------CCC--------------------
Confidence 4799999999999999876 56666666664 12455555522 111
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCc
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGR 452 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGk 452 (706)
+.+.++|++++.|+++++.. |+
T Consensus 76 -------~~l~~~~~v~~~Pt~~~~~~-g~ 97 (504)
T 2b5e_A 76 -------QDLCMEHNIPGFPSLKIFKN-SD 97 (504)
T ss_dssp -------HHHHHHTTCCSSSEEEEEET-TC
T ss_pred -------HHHHHhcCCCcCCEEEEEeC-Cc
Confidence 23677889999999999964 55
No 223
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=88.26 E-value=0.98 Score=41.63 Aligned_cols=58 Identities=10% Similarity=0.107 Sum_probs=44.7
Q ss_pred CccccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhC--CceeEEEeccCCchhhhhhhhh
Q 005245 498 VIPTWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAG--IALEMLYVGKSNPKEKARRIIS 557 (706)
Q Consensus 498 ~I~~~i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~--~~~E~v~Vgkdn~~e~v~~~~~ 557 (706)
.+.+. .||.+.|||.+.+ ..|+++.+.+.+++++.+ ..++++.|+.|...+.+++.++
T Consensus 42 ~l~~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~ 102 (165)
T 3s9f_A 42 DMDSL--SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYA 102 (165)
T ss_dssp CSGGG--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHT
T ss_pred cHHHc--CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHH
Confidence 34443 7999999999843 446999999999987643 4899999999988777766553
No 224
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=88.01 E-value=3.3 Score=41.05 Aligned_cols=101 Identities=9% Similarity=0.027 Sum_probs=52.9
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcCh---------hhHHHHH-HhhcCCC
Q 005245 345 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTE---------AKEHKFE-ALQYMMP 414 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D---------~de~~Fe-~~~~~MP 414 (706)
.+|.+...|++.|||.|... .+...++.+ . ++..|+|+++- ...+.+. .++.+|- .+...+.
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~--~~~l~~~~~----~-g~v~v~~~~~p-~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 167 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQF--WQQARPWVD----S-GKVQLRTLLVG-VIKPESPATAAAILASKDPAKTWQQYEASGG 167 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHH--HHHHHHHHH----T-TSEEEEEEECC-CSSTTHHHHHHHHHHSSSHHHHHHHHHHTTT
T ss_pred CCCeEEEEEECCCChhHHHH--HHHHHHHHh----C-CcEEEEEEECC-cCCCcHHHHHHHHHHccCHHHHHHHHHHHhc
Confidence 57899999999999999863 222222321 1 35778887751 0001111 1233332 2221110
Q ss_pred ceeeccCCCCCHHH------HHHHHHhhCCCCCcEEEEECCCCce
Q 005245 415 WFSVHHPSAIDPAV------IRYAKEKWDFRKKPILVVLDPQGRV 453 (706)
Q Consensus 415 WyAVpf~~~id~~~------~r~ike~~~~~~iP~LVvL~pqGkv 453 (706)
=-.+.-....+.+. ...+-+.+++++.|++++.|.+|++
T Consensus 168 ~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 168 KLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred cCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 00000000011222 2234578999999999999989974
No 225
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=87.83 E-value=2 Score=41.63 Aligned_cols=95 Identities=17% Similarity=0.169 Sum_probs=52.1
Q ss_pred ecCcEEEEEEecCCCChhHHH--HHHHHHHHHhhcccCCCCCeEEEEE--ecccCCCCcC---------h-hhHHHHHHh
Q 005245 344 LRRKSVLLLVSDLDVSNEELF--LLEQMYRESRQLSSRTESQYEVVWL--PIVDRSTPWT---------E-AKEHKFEAL 409 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~~--~L~~iY~elk~~~~~~~~~fEIVwI--piVd~s~~w~---------D-~de~~Fe~~ 409 (706)
-.||.+.+.|++.|||.|... .|.++.+ . +..|+++ |+... .+++ . +..+.|.+.
T Consensus 84 ~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~--------~--~v~v~~~~~p~~~~-~~~s~~~a~a~~~a~d~~~~~~~~ 152 (216)
T 1eej_A 84 PQEKHVITVFTDITCGYCHKLHEQMADYNA--------L--GITVRYLAFPRQGL-DSDAEKEMKAIWCAKDKNKAFDDV 152 (216)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHTTHHHHHH--------T--TEEEEEEECCTTCS-SSHHHHHHHHHHTSSSHHHHHHHH
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHh--------C--CcEEEEEECCccCC-CchHHHHHHHHHhccCHHHHHHHH
Confidence 357899999999999999863 3544322 1 3667666 43110 0100 0 112334443
Q ss_pred hcCCCceeeccCC-CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 410 QYMMPWFSVHHPS-AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 410 ~~~MPWyAVpf~~-~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
...-+ ++++. .........+.+.+++++.|++++. +|+.+
T Consensus 153 ~~~~~---~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~--dG~~~ 193 (216)
T 1eej_A 153 MAGKS---VAPASCDVDIADHYALGVQLGVSGTPAVVLS--NGTLV 193 (216)
T ss_dssp HTTCC---CCCCCCSCCHHHHHHHHHHHTCCSSSEEECT--TSCEE
T ss_pred HhCCC---CChhHHHHHHHHHHHHHHHcCCCccCEEEEc--CCeEe
Confidence 33222 22211 1123444567789999999999664 46543
No 226
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=87.36 E-value=0.1 Score=45.49 Aligned_cols=18 Identities=17% Similarity=0.053 Sum_probs=16.3
Q ss_pred CcccccCChhhHHHhhhh
Q 005245 466 GSVAFPFSVAREEALWKE 483 (706)
Q Consensus 466 G~~AFPFT~~r~eeL~~~ 483 (706)
|++|||||.+|+++|.++
T Consensus 1 ~~~a~pfte~~~~~~~~~ 18 (89)
T 1v5n_A 1 GSSGSSGTEERLKEIEAK 18 (89)
T ss_dssp CCCCCCCCSSCCSHHHHH
T ss_pred CCcccccCHHHHHHHHHH
Confidence 889999999999999765
No 227
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=85.95 E-value=0.98 Score=43.63 Aligned_cols=66 Identities=9% Similarity=0.082 Sum_probs=43.4
Q ss_pred CcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCC
Q 005245 346 RKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSA 423 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~ 423 (706)
+|.|++-|+|.||+||.. |+|.++=++.. +...|+=| | -|+ .|+
T Consensus 41 ~k~VVVdF~A~WCgPCk~m~PvleelA~e~~-------~~v~f~kV---D-------VDe----------------~~e- 86 (160)
T 2av4_A 41 ERLVCIRFGHDYDPDCMKMDELLYKVADDIK-------NFCVIYLV---D-------ITE----------------VPD- 86 (160)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEE---E-------TTT----------------CCT-
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHcc-------CCcEEEEE---E-------CCC----------------CHH-
Confidence 578999999999999987 45555544442 23444444 2 221 011
Q ss_pred CCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 424 IDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 424 id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
+.+.|+++.+|+++++- +|+.+
T Consensus 87 --------~a~~y~V~siPT~~fFk-~G~~v 108 (160)
T 2av4_A 87 --------FNTMYELYDPVSVMFFY-RNKHM 108 (160)
T ss_dssp --------TTTTTTCCSSEEEEEEE-TTEEE
T ss_pred --------HHHHcCCCCCCEEEEEE-CCEEE
Confidence 34567999999999884 66665
No 228
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=85.93 E-value=1.5 Score=45.29 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=43.3
Q ss_pred cCcEEEEEEecCCCChhHH--HH---HHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeec
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FL---LEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVH 419 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~---L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVp 419 (706)
++|.|++.|.|.||+ |.. |. +..+|+++.+.- .+.+ |.++-+ |- |++
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~--~~~~--v~~~~V-d~-----~~~----------------- 78 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVL--EHKD--IGFVMV-DA-----KKE----------------- 78 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHG--GGSS--EEEEEE-ET-----TTT-----------------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHH--hhcC--cEEEEE-eC-----CCC-----------------
Confidence 478999999999998 532 44 334454443211 1113 444443 21 111
Q ss_pred cCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 420 HPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 420 f~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
+.+.++|++++.|+++++ .+|++.
T Consensus 79 ----------~~l~~~~~v~~~Pt~~~~-~~g~~~ 102 (350)
T 1sji_A 79 ----------AKLAKKLGFDEEGSLYVL-KGDRTI 102 (350)
T ss_dssp ----------HHHHHHHTCCSTTEEEEE-ETTEEE
T ss_pred ----------HHHHHhcCCCccceEEEE-ECCcEE
Confidence 136678899999999999 678744
No 229
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=85.32 E-value=1.5 Score=38.09 Aligned_cols=50 Identities=14% Similarity=0.137 Sum_probs=41.1
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHh--CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGAVARAA--GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~--~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|||.+ .|| +...+.+.+++++. +..++++.|+.|...+.+++..
T Consensus 32 ~gk~vll~F~~--~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 86 (148)
T 3fkf_A 32 RNRYLLLNFWA--SWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAI 86 (148)
T ss_dssp TTSEEEEEEEC--GGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHH
T ss_pred CCcEEEEEEEC--CCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHH
Confidence 89999999998 676 89999999998764 3459999999998777766654
No 230
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=85.26 E-value=1.9 Score=45.33 Aligned_cols=72 Identities=13% Similarity=0.185 Sum_probs=46.9
Q ss_pred cCcEEEEEEecCCCChhHH-HHHH---HHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeecc
Q 005245 345 RRKSVLLLVSDLDVSNEEL-FLLE---QMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHH 420 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~-~~L~---~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf 420 (706)
.++.|++.|.|.||++|.. +.|. .+|+++.+.- .+. .|.+.-+ | .++.
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~--~~~--~v~~~~V-d-------~~~~---------------- 80 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVL--EDK--GVGFGLV-D-------SEKD---------------- 80 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHH--TTT--TEEEEEE-E-------TTTT----------------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHh--hcC--CceEEEE-e-------Cccc----------------
Confidence 4789999999999988755 4343 4666665321 122 3555543 3 2211
Q ss_pred CCCCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 421 PSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 421 ~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
+-|.++|++++.|+++++. +|+.+
T Consensus 81 ---------~~l~~~~~V~~~PTl~~f~-~G~~~ 104 (367)
T 3us3_A 81 ---------AAVAKKLGLTEEDSIYVFK-EDEVI 104 (367)
T ss_dssp ---------HHHHHHHTCCSTTEEEEEE-TTEEE
T ss_pred ---------HHHHHHcCCCcCceEEEEE-CCcEE
Confidence 1367788999999999997 57654
No 231
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=85.06 E-value=0.76 Score=41.21 Aligned_cols=88 Identities=9% Similarity=0.079 Sum_probs=54.1
Q ss_pred CcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCCC
Q 005245 346 RKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAID 425 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~id 425 (706)
++.|.++|.+.||++|.. +..++++|.+.. .+.. |+-+ |.|+.
T Consensus 23 ~~~vvv~F~a~wc~~C~~--~~p~l~~la~~~----~~v~--f~kv--------d~d~~--------------------- 65 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLL--VNQHLSLLARKF----PETK--FVKA--------IVNSC--------------------- 65 (118)
T ss_dssp TCEEEEEEECTTSHHHHH--HHHHHHHHHHHC----TTSE--EEEE--------EGGGT---------------------
T ss_pred CCeEEEEEeCCCChHHHH--HHHHHHHHHHHC----CCCE--EEEE--------EhHHh---------------------
Confidence 458999999999999986 455566665321 2344 4443 22320
Q ss_pred HHHHHHHHHhhCCCCCcEEEEECCCCceecccHHHHHHHhCcccccCChhhHHHhhh
Q 005245 426 PAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAFPFSVAREEALWK 482 (706)
Q Consensus 426 ~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AFPFT~~r~eeL~~ 482 (706)
.+.|+++++|+++++- +|+.+..- .+. ...|-+ -||.+.+|..-.
T Consensus 66 -------~~~~~v~~~PT~~~fk-~G~~v~~~-~G~-~~~gg~--~~~~~~le~~L~ 110 (118)
T 3evi_A 66 -------IQHYHDNCLPTIFVYK-NGQIEAKF-IGI-IECGGI--NLKLEELEWKLA 110 (118)
T ss_dssp -------STTCCGGGCSEEEEEE-TTEEEEEE-EST-TTTTCS--SCCHHHHHHHHH
T ss_pred -------HHHCCCCCCCEEEEEE-CCEEEEEE-eCh-hhhCCC--CCCHHHHHHHHH
Confidence 0356889999999994 78777542 111 122322 588887776543
No 232
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=83.92 E-value=1.2 Score=38.80 Aligned_cols=52 Identities=10% Similarity=-0.009 Sum_probs=40.5
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHhC-CceeEEEeccCCchhhhhhhhhh
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGAVARAAG-IALEMLYVGKSNPKEKARRIIST 558 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~~-~~~E~v~Vgkdn~~e~v~~~~~~ 558 (706)
.||.+.|||.+ .|| +...+.+.++++..+ ..++++.|+.|...+.+++.++.
T Consensus 30 ~gk~vll~f~~--~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~ 85 (148)
T 3hcz_A 30 QAKYTILFFWD--SQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRS 85 (148)
T ss_dssp CCSEEEEEEEC--GGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHH
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHH
Confidence 89999999998 676 788888888877643 35999999999777766665543
No 233
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=83.89 E-value=0.57 Score=45.85 Aligned_cols=45 Identities=13% Similarity=-0.025 Sum_probs=35.0
Q ss_pred hhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCceeccc
Q 005245 409 LQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 409 ~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 457 (706)
-+..+||.+|++-.. ..+.+.++|++++.|+||+++++|++...|
T Consensus 178 d~~~~~~i~v~~~~~----~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~ 222 (244)
T 3q6o_A 178 DLSQHKGVAVRRVLN----TEANVVRKFGVTDFPSCYLLFRNGSVSRVP 222 (244)
T ss_dssp HTTTCTTEEEEEEET----TCHHHHHHHTCCCSSEEEEEETTSCEEECC
T ss_pred HhccCCceEEEEEeC----chHHHHHHcCCCCCCeEEEEeCCCCeEeec
Confidence 345678888877441 125566778999999999999999999887
No 234
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=83.87 E-value=3.7 Score=39.80 Aligned_cols=95 Identities=15% Similarity=0.175 Sum_probs=51.4
Q ss_pred cCcEEEEEEecCCCChhHHH--HHHHHHHHHhhcccCCCCCeEEEEE--eccc-CCC-------CcC-hhhHHHHHHhhc
Q 005245 345 RRKSVLLLVSDLDVSNEELF--LLEQMYRESRQLSSRTESQYEVVWL--PIVD-RST-------PWT-EAKEHKFEALQY 411 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~~--~L~~iY~elk~~~~~~~~~fEIVwI--piVd-~s~-------~w~-D~de~~Fe~~~~ 411 (706)
.+|.+...|++.|||.|... .|.+ +.+ . +.+|+|+ |+.. ++. -|. ....+.|.+.+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~----~~~----~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~ 154 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKE----YND----L--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEK 154 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHH----HHH----T--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHH----HHh----C--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHc
Confidence 47899999999999999864 3444 331 1 3666665 5411 000 000 011233444443
Q ss_pred CCCceeeccCC-CCCHHHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 412 MMPWFSVHHPS-AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 412 ~MPWyAVpf~~-~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
.-+ ++... .........+-+.+++++.|++++ .+|+.+
T Consensus 155 ~~~---~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~~~ 193 (211)
T 1t3b_A 155 GNL---PKEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGELI 193 (211)
T ss_dssp TCC---CSSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSCCC
T ss_pred CCC---CChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCEEe
Confidence 321 22211 011223345668899999999998 568744
No 235
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=83.83 E-value=2.5 Score=38.81 Aligned_cols=30 Identities=3% Similarity=-0.082 Sum_probs=23.7
Q ss_pred eecCcEEEEEEecCCCChhHHH--HHHHHHHH
Q 005245 343 VLRRKSVLLLVSDLDVSNEELF--LLEQMYRE 372 (706)
Q Consensus 343 ~L~gK~VlL~fSal~~~~~e~~--~L~~iY~e 372 (706)
.-.+|.+...|++.|||.|... .|.+++++
T Consensus 19 ~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~ 50 (175)
T 3gyk_A 19 NPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDA 50 (175)
T ss_dssp CTTCSEEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEECCCCccHHHHHHHHHHHHHh
Confidence 4568899999999999998874 56666554
No 236
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=83.58 E-value=1.7 Score=38.31 Aligned_cols=54 Identities=9% Similarity=0.022 Sum_probs=41.9
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHH---HHHH-hCCceeEEEeccCCchhhhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGA---VARA-AGIALEMLYVGKSNPKEKARRIIST 558 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~---I~~~-~~~~~E~v~Vgkdn~~e~v~~~~~~ 558 (706)
.||.+.|+|-+.+ ..|+...+.+.+ ++++ .+..++++.|+.|...+.+++.++.
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~ 88 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRND 88 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGG
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHh
Confidence 7899999998832 345888888888 7665 3678999999999888877765543
No 237
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=83.56 E-value=1.5 Score=38.99 Aligned_cols=52 Identities=17% Similarity=0.094 Sum_probs=39.9
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|+|.+.+ ..|+...+.+.+++++. +..++++.|+.|...+.+++.+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~ 81 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAI 81 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHH
Confidence 7999999998832 33588889999987764 3469999999997666665544
No 238
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=82.62 E-value=2.8 Score=34.34 Aligned_cols=47 Identities=6% Similarity=-0.077 Sum_probs=38.5
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEK 551 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~ 551 (706)
.+|.+.+||.+++ .+|+.+.+.+.++++..+..+.++.|.-++..+-
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 65 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPST 65 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHH
Confidence 8899999999954 5679999999999888666789999988765443
No 239
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=82.56 E-value=2.4 Score=37.35 Aligned_cols=52 Identities=10% Similarity=-0.000 Sum_probs=39.7
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhC-CceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAG-IALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~-~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|||.+.+ ..|+.+.+.+.++++... ..++++.|+.|...+.+++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 80 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFL 80 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHH
Confidence 7999999998742 446888999998877643 359999999997666665544
No 240
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=82.50 E-value=2.2 Score=35.18 Aligned_cols=51 Identities=8% Similarity=-0.059 Sum_probs=40.1
Q ss_pred ccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhh
Q 005245 501 TWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEK 551 (706)
Q Consensus 501 ~~i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~ 551 (706)
+.+..||.+.+||.+++ .+|+.+.+.+.++++..+..+.++.|..+...+-
T Consensus 16 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 67 (109)
T 3tco_A 16 EVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKI 67 (109)
T ss_dssp HHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHH
T ss_pred HHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHH
Confidence 33568999999999954 6679999999999887666788888888755433
No 241
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=82.08 E-value=1.5 Score=39.60 Aligned_cols=52 Identities=4% Similarity=-0.095 Sum_probs=39.1
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|+|.+.+ ..|+...+.+.+++++. +..++++.|+.|..++.+++..
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~ 87 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSA 87 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHH
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHH
Confidence 7999999999832 33477788888887763 3469999999998777665543
No 242
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=81.55 E-value=2.2 Score=38.04 Aligned_cols=52 Identities=8% Similarity=-0.053 Sum_probs=39.8
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|+|.+.+ ..|+.+.+.+.++++.. +..++++.|+.|...+.+++.+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~ 86 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYM 86 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 7999999998832 44588888888887764 3459999999987666666544
No 243
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=81.10 E-value=2.6 Score=34.59 Aligned_cols=47 Identities=6% Similarity=-0.012 Sum_probs=37.4
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
++.||.+.+||.+++ .+|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 15 ~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~ 62 (109)
T 2yzu_A 15 LGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENP 62 (109)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCH
Confidence 457899999999853 55699999999998876667888888877543
No 244
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=80.59 E-value=3 Score=34.37 Aligned_cols=47 Identities=9% Similarity=-0.024 Sum_probs=37.0
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
++.||.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 14 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~ 61 (105)
T 1nsw_A 14 IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP 61 (105)
T ss_dssp HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCH
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCH
Confidence 457899999999854 56699999999998876656888888877543
No 245
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=80.40 E-value=2 Score=46.57 Aligned_cols=30 Identities=13% Similarity=0.019 Sum_probs=24.9
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHh
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESR 374 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk 374 (706)
.+|.|+++|.+.||++|.. +.+.++.++.+
T Consensus 375 ~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~ 406 (504)
T 2b5e_A 375 PKKDVLVLYYAPWCGHCKRLAPTYQELADTYA 406 (504)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCChhHHHHhHHHHHHHHHhh
Confidence 4899999999999999876 56777777765
No 246
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=80.30 E-value=2.9 Score=37.04 Aligned_cols=52 Identities=12% Similarity=0.072 Sum_probs=41.7
Q ss_pred CceEEEEEccCCh-hH--HHHHHHHHHHHHHHh--CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EW--VRKFTALMGAVARAA--GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~W--ir~FT~~l~~I~~~~--~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|+|.+.+ .. |+...+.+.+++++. +..++++.|+.|..++.+++.+
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~ 88 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAI 88 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHH
Confidence 7999999998843 45 788888999987764 4569999999998777776655
No 247
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=80.22 E-value=3 Score=35.46 Aligned_cols=52 Identities=12% Similarity=0.063 Sum_probs=40.5
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRIIS 557 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~v~~~~~ 557 (706)
.||.+.|+|.+.+ ..|+.+.+.+.+++++.+ .++++.|+.+...+.+++..+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 76 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVN 76 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHH
Confidence 7899999998732 445888899999887766 899999998876666666543
No 248
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=80.14 E-value=4.1 Score=33.42 Aligned_cols=46 Identities=4% Similarity=-0.029 Sum_probs=36.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
..||.+.++|.+++ .+|+.+.+.+.+++++.+..+.++.|.-++..
T Consensus 18 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 64 (107)
T 2i4a_A 18 KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNP 64 (107)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCC
T ss_pred hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCH
Confidence 47899999999854 56799999999998876557888888877543
No 249
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=79.77 E-value=17 Score=35.78 Aligned_cols=42 Identities=12% Similarity=-0.152 Sum_probs=27.1
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh---C-CceeEEEeccC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA---G-IALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~---~-~~~E~v~Vgkd 546 (706)
.|+...+.|.+.+ .+|++..+.+.+++... + ..+.+..|.-+
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~ 183 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY 183 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECc
Confidence 5778778777722 33588888888887653 1 34555555444
No 250
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=79.76 E-value=7.2 Score=37.81 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=43.8
Q ss_pred cCcEEEEEEec-------CCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCc
Q 005245 345 RRKSVLLLVSD-------LDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPW 415 (706)
Q Consensus 345 ~gK~VlL~fSa-------l~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPW 415 (706)
++..|+++|.| .||.+|.. |.+.++=++.+... .++ .|+|.- ||- |+.+
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~--~~~--~v~f~k-vD~-----d~~~------------ 93 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQA--PQS--LNLFFT-VDV-----NEVP------------ 93 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHC--TTC--CEEEEE-EET-----TTCH------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhcc--CCC--CEEEEE-EEC-----ccCH------------
Confidence 45679999999 49999886 34444444443111 112 355553 231 3222
Q ss_pred eeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCce
Q 005245 416 FSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRV 453 (706)
Q Consensus 416 yAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv 453 (706)
-+.+.|+++++|+|+++-+.|+.
T Consensus 94 ---------------~la~~~~I~siPtl~~F~~g~~~ 116 (178)
T 3ga4_A 94 ---------------QLVKDLKLQNVPHLVVYPPAESN 116 (178)
T ss_dssp ---------------HHHHHTTCCSSCEEEEECCCCGG
T ss_pred ---------------HHHHHcCCCCCCEEEEEcCCCCC
Confidence 34456799999999999877644
No 251
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=79.49 E-value=6.2 Score=33.49 Aligned_cols=22 Identities=14% Similarity=0.021 Sum_probs=15.5
Q ss_pred EEEEecCCCChhHHHHHHHHHHHH
Q 005245 350 LLLVSDLDVSNEELFLLEQMYRES 373 (706)
Q Consensus 350 lL~fSal~~~~~e~~~L~~iY~el 373 (706)
..+|++.||++|.. +..+.+++
T Consensus 3 vv~f~a~~C~~C~~--~~~~L~~~ 24 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQ--AVEALAQA 24 (87)
T ss_dssp EEEEECSSCHHHHH--HHHHHHHT
T ss_pred EEEEECCCCchHHH--HHHHHHHH
Confidence 46799999999985 34444454
No 252
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=79.33 E-value=2.7 Score=37.79 Aligned_cols=41 Identities=5% Similarity=-0.011 Sum_probs=34.2
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkd 546 (706)
.||.+.|+|.+.+ ..|+...+.+.+++++.+ .++++.|+.|
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d 77 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFW 77 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECC
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEec
Confidence 8999999998732 335899999999988766 9999999988
No 253
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=79.04 E-value=4.7 Score=33.34 Aligned_cols=45 Identities=7% Similarity=-0.037 Sum_probs=36.3
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
+.||.+.++|.+++ .+|+.+.+.+.+++++.+..+.++.|.-+..
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~ 63 (108)
T 2trx_A 18 KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN 63 (108)
T ss_dssp TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC
T ss_pred hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCC
Confidence 47899999999953 5569999999999887666788888877754
No 254
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=78.84 E-value=3.1 Score=33.58 Aligned_cols=18 Identities=33% Similarity=0.536 Sum_probs=14.6
Q ss_pred HhhCCCCCcEEEEECCCCcee
Q 005245 434 EKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 434 e~~~~~~iP~LVvL~pqGkv~ 454 (706)
+.+++++.|++++ +|+++
T Consensus 49 ~~~gv~~vPt~~i---~g~~~ 66 (80)
T 2k8s_A 49 EKAGVKSVPALVI---DGAAF 66 (80)
T ss_dssp HHHTCCEEEEEEE---TTEEE
T ss_pred HHcCCCcCCEEEE---CCEEE
Confidence 5579999999988 78754
No 255
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=78.57 E-value=4 Score=34.09 Aligned_cols=47 Identities=13% Similarity=0.076 Sum_probs=37.1
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
+.||.+.++|.+++ .+|+.+.+.+.+++++.+..+.++.|.-+...+
T Consensus 21 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 68 (112)
T 1t00_A 21 KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG 68 (112)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHH
Confidence 47899999999843 556999999999988765678899998875543
No 256
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=78.24 E-value=5.3 Score=33.62 Aligned_cols=39 Identities=18% Similarity=0.044 Sum_probs=31.9
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEe
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYV 543 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~V 543 (706)
.||.+.|||.+.+ ..|+...+.+.++++..+..+.++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i 60 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTV 60 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEE
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 7999999999842 44588888888888777778999999
No 257
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=78.21 E-value=4.2 Score=33.58 Aligned_cols=47 Identities=6% Similarity=-0.046 Sum_probs=37.1
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
..||.+.++|.+++ .+|+.+.+.+.+++++.+..+.++.|..+...+
T Consensus 17 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~ 64 (107)
T 1dby_A 17 ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN 64 (107)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH
Confidence 36899999998854 667999999999988766678888888775443
No 258
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=77.85 E-value=4.4 Score=34.86 Aligned_cols=43 Identities=12% Similarity=-0.047 Sum_probs=35.3
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhC-CceeEEEeccCC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAG-IALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~-~~~E~v~Vgkdn 547 (706)
.||.+.|+|.+.+ ..|+.+.+.+.++++..+ ..++++.|+.|.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 77 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVN 77 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccC
Confidence 8999999998843 456899999999987744 689999998875
No 259
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=77.75 E-value=3.6 Score=35.77 Aligned_cols=47 Identities=17% Similarity=0.112 Sum_probs=37.9
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
...||.+.++|.+.+ .+|+++.+.+.++++..+..+.++.|.-+...
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~ 86 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE 86 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH
T ss_pred HccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 458999999999953 55699999999998876667888888877543
No 260
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=77.62 E-value=5.8 Score=32.43 Aligned_cols=45 Identities=9% Similarity=-0.066 Sum_probs=36.6
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.||.+.+||.+++ .+|+++.+.+.+++++.+..+.++.|..++..
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~ 64 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECE 64 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchH
Confidence 7899999999954 55799999999998876567888888887543
No 261
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=77.43 E-value=3.9 Score=34.02 Aligned_cols=47 Identities=9% Similarity=0.043 Sum_probs=37.3
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
..||.+.+||.+++ .+|+++.+.+.++++..+..+.++.|.-+...+
T Consensus 23 ~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~ 70 (115)
T 1thx_A 23 KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT 70 (115)
T ss_dssp TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH
T ss_pred cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHH
Confidence 47899999999943 456999999999988766568899988875543
No 262
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=77.19 E-value=4.5 Score=34.15 Aligned_cols=46 Identities=7% Similarity=-0.006 Sum_probs=36.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
..||.+.+||++++ .+|+++.+.+.+++++.+..+.++.|.-+...
T Consensus 28 ~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 74 (121)
T 2i1u_A 28 SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP 74 (121)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 47899999999953 55699999999998876667888888877543
No 263
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=77.17 E-value=3.9 Score=35.61 Aligned_cols=52 Identities=15% Similarity=0.112 Sum_probs=37.9
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHH---HHHH-hCCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGA---VARA-AGIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~---I~~~-~~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|+|.+.+ ..|+...+.+.+ +++. .+..++++.|+.|...+.+++.+
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 82 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKA 82 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHH
Confidence 7999999999842 335777776666 6554 24569999999997777766554
No 264
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=77.04 E-value=4.5 Score=35.68 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=39.5
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|||.+.+ ..|+...+.+.++++.. +..++++.|+.|...+.+++..
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~ 78 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFM 78 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH
Confidence 7999999998842 44588888888887764 3469999999887666666544
No 265
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=77.00 E-value=4.2 Score=36.08 Aligned_cols=55 Identities=9% Similarity=-0.011 Sum_probs=40.5
Q ss_pred CccccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhh
Q 005245 498 VIPTWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRI 555 (706)
Q Consensus 498 ~I~~~i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~ 555 (706)
.+++. .||.+.|+|.+.+ ..|+...+.+.+++++. +..++++.|+.|++ +.+++.
T Consensus 18 ~l~~~--~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~-~~~~~~ 74 (151)
T 3raz_A 18 SLQSL--KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTS-DNIGNF 74 (151)
T ss_dssp CGGGC--CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCH-HHHHHH
T ss_pred cHHHh--CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCh-HHHHHH
Confidence 44444 8999999999842 33588888898887764 67899999999865 344443
No 266
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=76.68 E-value=3.8 Score=36.34 Aligned_cols=62 Identities=8% Similarity=-0.046 Sum_probs=41.1
Q ss_pred cCCCCccccccCceEEEEEccCCh-hHHHHH-HHHHHHHHHHhC-CceeEEEeccC------Cchhhhhhhhh
Q 005245 494 SVDPVIPTWIMEQKHICLYGGEDL-EWVRKF-TALMGAVARAAG-IALEMLYVGKS------NPKEKARRIIS 557 (706)
Q Consensus 494 ~id~~I~~~i~egK~I~LYgg~d~-~Wir~F-T~~l~~I~~~~~-~~~E~v~Vgkd------n~~e~v~~~~~ 557 (706)
|-...+.++ .||.+.|+|.+.+ ..|+.. .+.+.+++++.+ ..++++.|+.+ ...+.+++.++
T Consensus 20 g~~~~l~~~--~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~ 90 (160)
T 3lor_A 20 HEGLSNEDL--RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFID 90 (160)
T ss_dssp SCCCCHHHH--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHH
T ss_pred CCccCHHHh--CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHH
Confidence 433344444 7999999999842 334774 888888877643 46999999863 34455555443
No 267
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=76.65 E-value=4.5 Score=34.67 Aligned_cols=46 Identities=4% Similarity=-0.084 Sum_probs=36.6
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
+.||.+.|||.+++ .+|+++.+.+.+++++.+..+.++.|.-++..
T Consensus 29 ~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~ 75 (119)
T 1w4v_A 29 NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT 75 (119)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTH
T ss_pred cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCH
Confidence 47899999999853 55699999999998876557888888877544
No 268
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=76.43 E-value=9.3 Score=36.59 Aligned_cols=62 Identities=13% Similarity=0.198 Sum_probs=45.2
Q ss_pred ceeecce-ecCcEEEEEEecCC-C--ChhHHHHHHHHHHHHhhcccCCCCCeE-EEEEecccCCCCcChhhHHHHHHhh
Q 005245 337 RKVSIDV-LRRKSVLLLVSDLD-V--SNEELFLLEQMYRESRQLSSRTESQYE-VVWLPIVDRSTPWTEAKEHKFEALQ 410 (706)
Q Consensus 337 ~kV~Is~-L~gK~VlL~fSal~-~--~~~e~~~L~~iY~elk~~~~~~~~~fE-IVwIpiVd~s~~w~D~de~~Fe~~~ 410 (706)
+.|++++ ++||.|.|||=-.+ + |..|+..+.+.|+++++ .+.+ |+=||. | +-...+.|.+-.
T Consensus 32 ~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~------~gv~~VigIS~-D-----~~~~~~~w~~~~ 98 (171)
T 2xhf_A 32 KSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKE------EGYHTIACIAV-N-----DPFVMAAWGKTV 98 (171)
T ss_dssp CEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHH------TTCCEEEEEES-S-----CHHHHHHHHHHH
T ss_pred cEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH------CCCCEEEEEeC-C-----CHHHHHHHHHhc
Confidence 7999999 59999888876544 3 45667889999999984 3575 888986 4 244566776543
No 269
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=76.12 E-value=5.3 Score=32.63 Aligned_cols=46 Identities=2% Similarity=-0.027 Sum_probs=36.1
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
.||.+.++|.+++ .+|+.+.+.+.+++++.+..+.++.|.-++..+
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 63 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPG 63 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHH
Confidence 6888999998853 556999999999988766678888888775443
No 270
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=76.03 E-value=4.7 Score=34.12 Aligned_cols=47 Identities=4% Similarity=-0.041 Sum_probs=35.8
Q ss_pred cccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 502 WIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 502 ~i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.++.||.+.++|.+++ .+|+.+.+.+.++++..+ .+.++.|..+...
T Consensus 20 ~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~~~~ 67 (109)
T 3f3q_A 20 AIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELG 67 (109)
T ss_dssp HTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH
T ss_pred HHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCH
Confidence 3568999999999954 556999999999988743 3777777776443
No 271
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=75.93 E-value=4.7 Score=34.40 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=40.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRIIS 557 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~v~~~~~ 557 (706)
.||.+.|+|.+.+ ..|+++.+.+.+++++.+ .++++.|+.+...+.+++..+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~ 75 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVS 75 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHH
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHH
Confidence 7899999998832 445888888998887766 899999999876666666543
No 272
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=75.54 E-value=2.8 Score=38.27 Aligned_cols=64 Identities=5% Similarity=-0.101 Sum_probs=41.3
Q ss_pred HHhCcccccCChhhHHHhhhhcccccccccccCCCCccccccCceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCce
Q 005245 463 WIWGSVAFPFSVAREEALWKEETWRIDLLADSVDPVIPTWIMEQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIAL 538 (706)
Q Consensus 463 ~~wG~~AFPFT~~r~eeL~~~e~w~lelLvd~id~~I~~~i~egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~ 538 (706)
.-+|+.|++|+-.. .+|-...+++. .||.+.|+|.+ .|| + ..+.+.+++++. +..+
T Consensus 6 ~~~~~~~~~f~l~d---------------~~G~~~~l~~~--~Gk~vll~F~a--~wC~~C~-~~~~l~~l~~~~~~~~v 65 (171)
T 3cmi_A 6 HHHMSEFYKLAPVD---------------KKGQPFPFDQL--KGKVVLIVNVA--SKCGFTP-QYKELEALYKRYKDEGF 65 (171)
T ss_dssp ----CGGGGCCCBB---------------TTSCBCCGGGG--TTCEEEEEEEE--SSSCCHH-HHHHHHHHHHHHGGGTE
T ss_pred ccchhheeeeEEEc---------------CCCCEecHHHc--CCCEEEEEEEe--cCCCcch-hHHHHHHHHHHhccCCe
Confidence 34788888883211 12333344554 79999999998 665 7 778888887763 3469
Q ss_pred eEEEeccC
Q 005245 539 EMLYVGKS 546 (706)
Q Consensus 539 E~v~Vgkd 546 (706)
+++.|+.|
T Consensus 66 ~vv~vs~d 73 (171)
T 3cmi_A 66 TIIGFPCN 73 (171)
T ss_dssp EEEEEEEC
T ss_pred EEEEEECc
Confidence 99999874
No 273
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=75.46 E-value=27 Score=32.42 Aligned_cols=42 Identities=14% Similarity=0.018 Sum_probs=31.0
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEec
Q 005245 345 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPI 391 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpi 391 (706)
.+|.+++.|++.|||.|... ..+..++.+. .+.++.++.+|+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~--~~~l~~l~~~---~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAF--EPTIVPWSEK---LPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHH--HHHHHHHHHT---CCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHh--hHHHHHHHHh---CCCCeEEEEEeh
Confidence 68999999999999999874 2344555532 334788888887
No 274
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=75.44 E-value=4.3 Score=36.07 Aligned_cols=68 Identities=6% Similarity=0.120 Sum_probs=44.1
Q ss_pred CcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCCC
Q 005245 346 RKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAID 425 (706)
Q Consensus 346 gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~id 425 (706)
++.|+++|.+. |++|. .+..+++++.+ +-.+++.+++|-+ |+ |.
T Consensus 23 ~~pv~v~f~a~-~~~c~--~~~p~l~~~A~---~~~gk~~f~~vd~----------d~--~~------------------ 66 (133)
T 2djk_A 23 GIPLAYIFAET-AEERK--ELSDKLKPIAE---AQRGVINFGTIDA----------KA--FG------------------ 66 (133)
T ss_dssp TSCEEEEECSC-SSSHH--HHHHHHHHHHH---SSTTTSEEEEECT----------TT--TG------------------
T ss_pred CCCEEEEEecC-hhhHH--HHHHHHHHHHH---HhCCeEEEEEEch----------HH--hH------------------
Confidence 46688889888 56775 56666666653 2345677888732 21 10
Q ss_pred HHHHHHHHHhhCCCC--CcEEEEECC-CCcee
Q 005245 426 PAVIRYAKEKWDFRK--KPILVVLDP-QGRVV 454 (706)
Q Consensus 426 ~~~~r~ike~~~~~~--iP~LVvL~p-qGkv~ 454 (706)
.+.+.|++++ +|+|++++. +|+..
T Consensus 67 -----~~a~~~gi~~~~iPtl~i~~~~~g~~~ 93 (133)
T 2djk_A 67 -----AHAGNLNLKTDKFPAFAIQEVAKNQKF 93 (133)
T ss_dssp -----GGTTTTTCCSSSSSEEEEECTTTCCBC
T ss_pred -----HHHHHcCCCcccCCEEEEEecCcCccc
Confidence 1234568888 999999984 67664
No 275
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=75.24 E-value=2 Score=37.47 Aligned_cols=25 Identities=8% Similarity=0.081 Sum_probs=19.6
Q ss_pred HHHHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 427 AVIRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 427 ~~~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
+..+.+.+.+++++.|.+++ +|+.+
T Consensus 62 ~~~~~l~~~~g~~~vP~v~i---~g~~i 86 (114)
T 2hze_A 62 ELRDYFEQITGGKTVPRIFF---GKTSI 86 (114)
T ss_dssp HHHHHHHHHHSCCSSCEEEE---TTEEE
T ss_pred HHHHHHHHHhCCCCcCEEEE---CCEEE
Confidence 55667888889999998765 57765
No 276
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=75.18 E-value=3.6 Score=38.08 Aligned_cols=50 Identities=6% Similarity=-0.030 Sum_probs=37.9
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCC-------chhhhhhhh
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSN-------PKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkdn-------~~e~v~~~~ 556 (706)
.||.+.|+|.+ .|| +.-.+.+.+++++. +..++++.|+.|. ..+.+++..
T Consensus 37 ~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~ 97 (180)
T 3kij_A 37 KGKVSLVVNVA--SDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFA 97 (180)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHH
T ss_pred CCCEEEEEEEe--cCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHH
Confidence 89999999999 565 88888888887764 4469999998664 445555544
No 277
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=74.93 E-value=4.5 Score=34.13 Aligned_cols=46 Identities=4% Similarity=0.037 Sum_probs=35.8
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
++.||.+.+||.+++ .+|+++.+.+.+++++.+ .+.++.|.-+...
T Consensus 23 ~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~ 69 (112)
T 1syr_A 23 ISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVS 69 (112)
T ss_dssp HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTH
T ss_pred HccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCH
Confidence 568999999999953 566999999999987743 5888888777543
No 278
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=74.55 E-value=7.4 Score=34.17 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=38.7
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCc-hhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNP-KEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~-~e~v~~~~ 556 (706)
.||.+.|+|.+.+ ..|+...+.+.++++.. +..++++.|+.|.. .+.+++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~ 81 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFF 81 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHH
Confidence 8899999998732 44588888888887764 44899999999875 55554433
No 279
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=74.30 E-value=5.7 Score=34.97 Aligned_cols=46 Identities=9% Similarity=0.012 Sum_probs=36.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
+.||.+.++|.+++ .+|+++.+.+.+++++.+..+.++.|.-+...
T Consensus 36 ~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~ 82 (136)
T 2l5l_A 36 EGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQ 82 (136)
T ss_dssp CCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH
T ss_pred cCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCH
Confidence 46899999999953 55699999999998876667888888877543
No 280
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=76.31 E-value=0.65 Score=40.50 Aligned_cols=48 Identities=19% Similarity=0.452 Sum_probs=37.5
Q ss_pred Cce-EEEEEccCChhHH---HHHHHHHHHHHHHh---CCceeEEEeccCCchhhhhh
Q 005245 505 EQK-HICLYGGEDLEWV---RKFTALMGAVARAA---GIALEMLYVGKSNPKEKARR 554 (706)
Q Consensus 505 egK-~I~LYgg~d~~Wi---r~FT~~l~~I~~~~---~~~~E~v~Vgkdn~~e~v~~ 554 (706)
.|| .+.|||.+ .|| +.+.+.+.+++++. +..++++.|+.|...+.+++
T Consensus 24 ~gk~~vll~F~a--~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~ 78 (143)
T 2lus_A 24 KDKDIIGFYFSA--HWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQ 78 (143)
Confidence 788 99999999 676 78888888886653 46899999999866555544
No 281
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=73.94 E-value=5.4 Score=35.47 Aligned_cols=50 Identities=8% Similarity=0.043 Sum_probs=39.9
Q ss_pred cccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhh
Q 005245 502 WIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEK 551 (706)
Q Consensus 502 ~i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~ 551 (706)
.+..||.+.++|.+++ ..|+.+.+.+.++++..+..+.++.|..+...+-
T Consensus 51 ~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l 101 (148)
T 3p2a_A 51 LLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPAL 101 (148)
T ss_dssp HTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHH
T ss_pred HHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHH
Confidence 3568999999999954 5569999999999888766788888888765443
No 282
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=73.93 E-value=5.4 Score=32.21 Aligned_cols=47 Identities=2% Similarity=-0.060 Sum_probs=36.2
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
+..||.+.+||.+++ .+|+++.+.+.++++..+. +.++.|..++..+
T Consensus 13 ~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~ 60 (104)
T 2e0q_A 13 LASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPD 60 (104)
T ss_dssp HHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH
T ss_pred HhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHH
Confidence 457899999999853 5579999999999877544 8888888775443
No 283
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=73.45 E-value=4.6 Score=38.96 Aligned_cols=99 Identities=8% Similarity=0.074 Sum_probs=60.9
Q ss_pred ceeecce-ecCcEEEEEEecC-CCChhH---HHHHHHHHHHH-hhcccCCCCCeE-EEEEecccCCCCcChhhHHHHHHh
Q 005245 337 RKVSIDV-LRRKSVLLLVSDL-DVSNEE---LFLLEQMYRES-RQLSSRTESQYE-VVWLPIVDRSTPWTEAKEHKFEAL 409 (706)
Q Consensus 337 ~kV~Is~-L~gK~VlL~fSal-~~~~~e---~~~L~~iY~el-k~~~~~~~~~fE-IVwIpiVd~s~~w~D~de~~Fe~~ 409 (706)
+.|++++ ++||.|.|||=-. |+|.|- +..+.+.|+++ ++ .+.+ |+=||. | +-...+.|.+-
T Consensus 33 ~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~------~g~~~V~gvS~-D-----~~~~~~~~~~~ 100 (182)
T 1xiy_A 33 TSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKE------NNFDDIYCITN-N-----DIYVLKSWFKS 100 (182)
T ss_dssp EEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT------SCCSEEEEEES-S-----CHHHHHHHHHH
T ss_pred eeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHh------CCCcEEEEEeC-C-----CHHHHHHHHHH
Confidence 6899988 6999888877554 454454 56799999999 73 3475 777886 3 23445677653
Q ss_pred hc--CCCceeeccCCCCCHHHHHHHHHhhCCC------C-----CcEEEEECCCCceeccc
Q 005245 410 QY--MMPWFSVHHPSAIDPAVIRYAKEKWDFR------K-----KPILVVLDPQGRVVNQN 457 (706)
Q Consensus 410 ~~--~MPWyAVpf~~~id~~~~r~ike~~~~~------~-----iP~LVvL~pqGkv~~~n 457 (706)
.. ..|-+| |.. +.+.+.|++- | .....|+| +|+|....
T Consensus 101 ~~~~~f~lLs-------D~~--~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~~~ 151 (182)
T 1xiy_A 101 MDIKKIKYIS-------DGN--SSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVKMF 151 (182)
T ss_dssp TTCCSSEEEE-------CTT--SHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEEEE
T ss_pred cCCCCceEEE-------eCc--hHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEEEE
Confidence 32 123222 211 2334444541 2 45566778 99998654
No 284
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=73.42 E-value=5.7 Score=35.25 Aligned_cols=48 Identities=6% Similarity=-0.014 Sum_probs=38.1
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
+..+|.+.++|.+++ .+|++|.+.+.++++..+..+.++.|.-++..+
T Consensus 21 ~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~ 69 (140)
T 3hz4_A 21 EDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPW 69 (140)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHH
T ss_pred HhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHh
Confidence 347899999999953 556999999999988766678888888775543
No 285
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=73.41 E-value=4.6 Score=34.75 Aligned_cols=44 Identities=9% Similarity=0.092 Sum_probs=36.1
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEec--cC
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVG--KS 546 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vg--kd 546 (706)
...||.+.++|.+++ .+|+++.+.+.+++++.+..+.++.|. .|
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d 69 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEE 69 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSS
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 458999999999954 557999999999988765778999998 55
No 286
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=73.14 E-value=6.5 Score=32.52 Aligned_cols=46 Identities=15% Similarity=0.101 Sum_probs=37.0
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
..+|.+.++|.+++ ..|+.+.+.+.++++..+..+.++.|.-+...
T Consensus 20 ~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~ 66 (111)
T 3gnj_A 20 DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK 66 (111)
T ss_dssp TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH
T ss_pred hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcCh
Confidence 57899999999953 45699999999998876667888888877544
No 287
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=72.28 E-value=5.7 Score=34.76 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=37.2
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
.||.+.+||.+++ .+|+.+.+.+.++++..+..+.++.|.-|+..+
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 96 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPE 96 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHH
Confidence 7899999999943 446999999999988766678888888875543
No 288
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=72.22 E-value=4.7 Score=36.28 Aligned_cols=50 Identities=10% Similarity=0.085 Sum_probs=38.2
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhhh
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
..||.+.|+|.+.+ ..|+.+.+.+.+++++ .++++.|+.+...+.+++..
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~ 99 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWL 99 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHH
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHH
Confidence 48999999998842 4458888888888765 68899999776666666544
No 289
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=71.90 E-value=5.3 Score=35.13 Aligned_cols=45 Identities=7% Similarity=-0.036 Sum_probs=36.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
..||.+.++|.+++ .+|+++.+.+.+++++.+..+.++.|.-+..
T Consensus 38 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~ 83 (128)
T 2o8v_B 38 KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQN 83 (128)
T ss_dssp TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTC
T ss_pred hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC
Confidence 47899999999954 5569999999999887665788888887743
No 290
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=71.83 E-value=3.1 Score=38.50 Aligned_cols=50 Identities=8% Similarity=-0.021 Sum_probs=37.6
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRIIS 557 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~v~~~~~ 557 (706)
.||.+.|||.+.+ ..|+...+.+.+++++ .++++.|+.++..+.+++.++
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~ 107 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLN 107 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHH
Confidence 7999999998832 3357888888888765 699999997766677666554
No 291
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=71.62 E-value=7.3 Score=33.04 Aligned_cols=47 Identities=11% Similarity=-0.078 Sum_probs=36.9
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
..||.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|.-+...+
T Consensus 19 ~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 66 (122)
T 3aps_A 19 QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQ 66 (122)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHH
Confidence 47899999999953 556999999999988766578888888775443
No 292
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=71.62 E-value=3.4 Score=36.27 Aligned_cols=52 Identities=10% Similarity=0.035 Sum_probs=39.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|+|.+.+ ..|+...+.+.+++++. +..+.++.|+.|...+.+++..
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~ 82 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMV 82 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHH
Confidence 7899999998832 33588888888887764 4579999999887666655543
No 293
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=71.38 E-value=10 Score=33.48 Aligned_cols=59 Identities=12% Similarity=-0.026 Sum_probs=40.8
Q ss_pred CCccccccCceEEEEEccCCh-hHHHHH-HHHHHHHHHHhC-CceeEEEeccC------Cchhhhhhhhh
Q 005245 497 PVIPTWIMEQKHICLYGGEDL-EWVRKF-TALMGAVARAAG-IALEMLYVGKS------NPKEKARRIIS 557 (706)
Q Consensus 497 ~~I~~~i~egK~I~LYgg~d~-~Wir~F-T~~l~~I~~~~~-~~~E~v~Vgkd------n~~e~v~~~~~ 557 (706)
..+.+. .||.+.|+|.+.+ ..|+.. .+.+.+++++.+ ..++++.|+.| +..+.+++.++
T Consensus 21 ~~l~~~--~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~ 88 (158)
T 3eyt_A 21 LTLADL--RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLH 88 (158)
T ss_dssp CCTGGG--TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHH
T ss_pred cCHHHh--CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHH
Confidence 344444 7999999999842 335776 788888887744 57999999964 34555555443
No 294
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=71.31 E-value=4.4 Score=36.28 Aligned_cols=40 Identities=15% Similarity=0.022 Sum_probs=32.5
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccC
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkd 546 (706)
.||.+.|+|.+ .|| +...+.+.+++++. +..++++.|+.|
T Consensus 31 ~gk~vll~f~a--~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d 74 (170)
T 2p5q_A 31 KGKVLLIVNVA--SKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCN 74 (170)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEEe--ccCCccHHHHHHHHHHHHHhccCCEEEEEEECC
Confidence 79999999998 565 77788888887764 346999999976
No 295
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=71.03 E-value=4.6 Score=37.76 Aligned_cols=46 Identities=4% Similarity=-0.042 Sum_probs=35.4
Q ss_pred CccccccCceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCC
Q 005245 498 VIPTWIMEQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSN 547 (706)
Q Consensus 498 ~I~~~i~egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkdn 547 (706)
.+.+. .||.+.|+|.+ .|| +...+.+.+++++. +..++++.|+.|.
T Consensus 42 ~l~~~--~Gk~vll~F~a--twC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 91 (190)
T 2vup_A 42 NLVQH--KGSPLLIYNVA--SKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQ 91 (190)
T ss_dssp CGGGG--TTSCEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCC
T ss_pred EHHHc--CCCEEEEEEec--CCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCc
Confidence 44444 89999999998 665 77788888887763 3469999999873
No 296
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=70.61 E-value=9.9 Score=31.48 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=35.1
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
.||.+.++|.+++ .+|+++.+.+.++++..+ .+.++.|.-++..+
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~ 70 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKA 70 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHH
Confidence 5899999998853 667999999999987744 68888887775443
No 297
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=70.57 E-value=7.8 Score=33.37 Aligned_cols=43 Identities=7% Similarity=-0.098 Sum_probs=33.7
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn 547 (706)
.||.+.|+|.+.+ ..|+.+.+.+.+++++.+..+.++.|+.|.
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~ 71 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPR 71 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCC
Confidence 7899999998842 446888899999887655459999998764
No 298
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=70.42 E-value=4.8 Score=34.05 Aligned_cols=44 Identities=5% Similarity=0.003 Sum_probs=35.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
.||.+.++|.+++ .+|+++.+.+.+++++.+..+.++.|.-|..
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~ 60 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDEN 60 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCC
Confidence 7899999999943 4469999999999887655788888887754
No 299
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=70.38 E-value=6.6 Score=32.66 Aligned_cols=46 Identities=13% Similarity=0.035 Sum_probs=35.5
Q ss_pred cccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 502 WIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 502 ~i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
.++.||.+.+||.+++ ..|+.+.+.+.+++++. ..+.++.|.-|..
T Consensus 14 ~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~~ 60 (105)
T 4euy_A 14 YIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQDM 60 (105)
T ss_dssp STTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECCC
T ss_pred HHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCCC
Confidence 3468999999999943 44699999999998774 3688888877744
No 300
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=70.10 E-value=2.9 Score=36.38 Aligned_cols=43 Identities=12% Similarity=0.059 Sum_probs=34.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHH--HHHHHhCCceeEEEeccC
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMG--AVARAAGIALEMLYVGKS 546 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~--~I~~~~~~~~E~v~Vgkd 546 (706)
..||.+.|||++++ .+|+.+.+.+. ++++..+..+.++.|.-+
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~ 72 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVG 72 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCC
Confidence 47999999999954 55699999998 887765557888888873
No 301
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=69.98 E-value=6.6 Score=32.63 Aligned_cols=45 Identities=11% Similarity=0.008 Sum_probs=35.4
Q ss_pred ceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 506 QKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 506 gK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
||.+.++|.+++ .+|+.+.+.+.++++..+..+.++.|..+...+
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~ 69 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA 69 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHH
Confidence 899999999854 557999999999988755578888888775433
No 302
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=68.85 E-value=8.8 Score=31.20 Aligned_cols=44 Identities=14% Similarity=0.063 Sum_probs=34.0
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.||.+.++|.+++ .+|+.+.+.+.++++..+ .+.++.|.-++..
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~ 62 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNE 62 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCH
Confidence 7899999998853 557999999999987743 6777888776543
No 303
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=68.83 E-value=5.2 Score=37.09 Aligned_cols=41 Identities=5% Similarity=-0.073 Sum_probs=32.8
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCC
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkdn 547 (706)
.||.+.|+|.+ .|| +...+.+.+++++. +..++++.|+.|.
T Consensus 48 ~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~ 92 (181)
T 2p31_A 48 RGSVSLVVNVA--SECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQ 92 (181)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCCEEEEEEec--cCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcC
Confidence 79999999998 565 77888888887763 3459999998763
No 304
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=67.68 E-value=6.7 Score=33.65 Aligned_cols=47 Identities=4% Similarity=-0.005 Sum_probs=35.5
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
++.||.+.++|.+++ .+|+++.+.+.+++++.+. +.++.|.-+...+
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~ 74 (114)
T 2oe3_A 27 IKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPD 74 (114)
T ss_dssp HHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHH
T ss_pred HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH
Confidence 558999999999953 5569999999999877433 7888887765433
No 305
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=67.23 E-value=7.1 Score=34.27 Aligned_cols=51 Identities=10% Similarity=0.115 Sum_probs=38.1
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRIIS 557 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~v~~~~~ 557 (706)
.||.+.|+|.+.+ .+|+.+.+.+.+++++ ..++++.|+.+...+.+++...
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~ 92 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLG 92 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHH
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHH
Confidence 6999999998843 4468888888888655 4689999998776666666543
No 306
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=67.21 E-value=8.8 Score=32.61 Aligned_cols=43 Identities=12% Similarity=0.364 Sum_probs=32.3
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn 547 (706)
+..||.+.+||++++ .+|+.+.+.+.+++++.+ ..++++..+.
T Consensus 26 ~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~--~~v~~~~~~~ 69 (118)
T 1zma_A 26 LDKKETATFFIGRKTCPYCRKFAGTLSGVVAETK--AHIYFINSEE 69 (118)
T ss_dssp HHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC--CCCEEEETTC
T ss_pred HhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcC--CeEEEEECCC
Confidence 557899999999953 456999999999987655 3466665543
No 307
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=66.98 E-value=11 Score=34.41 Aligned_cols=52 Identities=12% Similarity=0.073 Sum_probs=38.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhC-CceeEEEeccCCc-hhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAG-IALEMLYVGKSNP-KEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~-~~~E~v~Vgkdn~-~e~v~~~~ 556 (706)
.||.+.|+|.+.+ ..|+...+.+.+++++.+ ..++++.|+.|.. .+.+++..
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~ 113 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFL 113 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHH
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHH
Confidence 7999999998832 445888888888877644 6899999999854 34444443
No 308
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.94 E-value=8.1 Score=33.10 Aligned_cols=45 Identities=7% Similarity=-0.096 Sum_probs=34.4
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhC----CceeEEEeccCCc
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAG----IALEMLYVGKSNP 548 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~----~~~E~v~Vgkdn~ 548 (706)
..+|.+.++|.+++ .+|+.+.+.+.++++..+ ..+.++.|.-+..
T Consensus 23 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 72 (133)
T 1x5d_A 23 DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVN 72 (133)
T ss_dssp TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTC
T ss_pred cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCC
Confidence 47899999999953 556999999988877643 5688888877643
No 309
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=66.65 E-value=3.3 Score=38.73 Aligned_cols=46 Identities=4% Similarity=-0.049 Sum_probs=35.7
Q ss_pred CCccccccCceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccC
Q 005245 497 PVIPTWIMEQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKS 546 (706)
Q Consensus 497 ~~I~~~i~egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkd 546 (706)
..+++. .||.+.|+|.+ .|| +...+.+.+++++. +..++++.|+.|
T Consensus 39 ~~l~~~--~Gk~vlv~F~a--twC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d 88 (187)
T 3dwv_A 39 YNLVQH--KGSPLLIYNVA--SKCGYTKGGYETATTLYNKYKSQGFTVLAFPSN 88 (187)
T ss_dssp CCGGGG--TTSCEEEEEEC--CBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBC
T ss_pred eeHHHh--CCCEEEEEEec--CCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECc
Confidence 344554 89999999998 666 77788888887763 346999999976
No 310
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=66.44 E-value=9.1 Score=32.43 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=34.0
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.||.+.++|.+++ .+|+++.+.+.++++.... +.++.|.-|+..
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~ 77 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELK 77 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCH
Confidence 5899999999853 5579999999999877433 788888777543
No 311
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=66.35 E-value=10 Score=30.88 Aligned_cols=45 Identities=7% Similarity=0.051 Sum_probs=34.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
.||.+.+||.+++ ..|+++.+.+.++++..+ .+.++.|..+...+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~ 64 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-NVIFLEVDVDDCQD 64 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-TSEEEEEETTTCHH
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-CeEEEEEEhhhhHH
Confidence 7899999999943 456999999999987743 37888887775433
No 312
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=66.15 E-value=8.1 Score=35.41 Aligned_cols=54 Identities=9% Similarity=0.097 Sum_probs=38.6
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCce------eEEEeccCC-chhhhhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIAL------EMLYVGKSN-PKEKARRIIST 558 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~------E~v~Vgkdn-~~e~v~~~~~~ 558 (706)
.||.+.|+|.+.+ ..|+...+.+.+++++. +..+ +++.|+-|. ..+.+++....
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~ 120 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTD 120 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHH
Confidence 7999999999832 33578888888887653 2236 999999987 66777665543
No 313
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=65.98 E-value=13 Score=32.33 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=34.3
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.||.+.+||.+++ .+|+++.+.+.+++++.+ .+.++.|.-|...
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~ 81 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELK 81 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCH
Confidence 5999999999943 446999999999987744 6888888777543
No 314
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=65.07 E-value=7.9 Score=33.68 Aligned_cols=48 Identities=6% Similarity=0.123 Sum_probs=34.7
Q ss_pred ccccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhC---CceeEEEeccCCc
Q 005245 501 TWIMEQKHICLYGGEDL-EWVRKFTALMGAVARAAG---IALEMLYVGKSNP 548 (706)
Q Consensus 501 ~~i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~---~~~E~v~Vgkdn~ 548 (706)
..++.||.+.++|.+++ .+|+++.+.+.++++..+ ..+.++.|.-++.
T Consensus 29 ~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~ 80 (140)
T 2dj1_A 29 NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA 80 (140)
T ss_dssp HHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC
T ss_pred HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc
Confidence 34568999999999943 446999999988877532 2477777766643
No 315
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=64.76 E-value=12 Score=31.29 Aligned_cols=68 Identities=10% Similarity=0.114 Sum_probs=40.0
Q ss_pred EEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCCCHHH
Q 005245 349 VLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAIDPAV 428 (706)
Q Consensus 349 VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~id~~~ 428 (706)
...+|++.|||+|.. +..+.+++... ..+|+. +.+ |.+.. ..+.
T Consensus 13 ~v~~f~~~~C~~C~~--~~~~L~~~~~~----~~~~~~--vdi--------~~~~~--------------------~~~~ 56 (105)
T 1kte_A 13 KVVVFIKPTCPFCRK--TQELLSQLPFK----EGLLEF--VDI--------TATSD--------------------TNEI 56 (105)
T ss_dssp CEEEEECSSCHHHHH--HHHHHHHSCBC----TTSEEE--EEG--------GGSTT--------------------HHHH
T ss_pred CEEEEEcCCCHhHHH--HHHHHHHcCCC----CCccEE--EEc--------cCCCC--------------------HHHH
Confidence 356689999999875 34444554321 112554 454 22110 0234
Q ss_pred HHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 429 IRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 429 ~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
...+.+.+++++.|++++ +|+.+.
T Consensus 57 ~~~l~~~~g~~~vP~i~~---~g~~i~ 80 (105)
T 1kte_A 57 QDYLQQLTGARTVPRVFI---GKECIG 80 (105)
T ss_dssp HHHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHHhCCCCcCeEEE---CCEEEe
Confidence 556777789999999865 577653
No 316
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=64.41 E-value=8.7 Score=42.21 Aligned_cols=70 Identities=11% Similarity=0.024 Sum_probs=44.9
Q ss_pred eecCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCC
Q 005245 343 VLRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPS 422 (706)
Q Consensus 343 ~L~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~ 422 (706)
.+.++.+...|++.||++|.. +.++.+++... ..+.++.-|-+ | .
T Consensus 114 ~~~~~~~i~~f~a~~C~~C~~--~~~~l~~~a~~----~~~v~~~~vd~--------~----~----------------- 158 (521)
T 1hyu_A 114 DIDGDFEFETYYSLSCHNCPD--VVQALNLMAVL----NPRIKHTAIDG--------G----T----------------- 158 (521)
T ss_dssp HCCSCEEEEEEECTTCSSHHH--HHHHHHHHHHH----CTTEEEEEEET--------T----T-----------------
T ss_pred hcCCCcceEEEECCCCcCcHH--HHHHHHHHHhH----cCceEEEEEec--------h----h-----------------
Confidence 345778899999999999985 34444444422 12455555421 2 1
Q ss_pred CCCHHHHHHHHHhhCCCCCcEEEEECCCCceecc
Q 005245 423 AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQ 456 (706)
Q Consensus 423 ~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~ 456 (706)
..-+.++++++.+|++++ +|+.+..
T Consensus 159 ------~~~~~~~~~i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 159 ------FQNEITERNVMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp ------CHHHHHHTTCCSSSEEEE---TTEEEEE
T ss_pred ------hHHHHHHhCCCccCEEEE---CCEEEec
Confidence 112456779999999988 8888743
No 317
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=64.08 E-value=5.7 Score=35.32 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=32.3
Q ss_pred CceEEEEEccCChhH----HHHHHHHHHHHHHHhC-----CceeEEEeccCCc
Q 005245 505 EQKHICLYGGEDLEW----VRKFTALMGAVARAAG-----IALEMLYVGKSNP 548 (706)
Q Consensus 505 egK~I~LYgg~d~~W----ir~FT~~l~~I~~~~~-----~~~E~v~Vgkdn~ 548 (706)
.||.+.|||.+ .| |+...+.+.+++++.+ ..++++.|+.|..
T Consensus 22 ~gk~vll~f~~--~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~ 72 (164)
T 2ggt_A 22 LGQWLLIYFGF--THCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPE 72 (164)
T ss_dssp TTCEEEEEEEC--TTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTT
T ss_pred CCCEEEEEEEe--CCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCC
Confidence 79999999998 56 4666677777766432 4899999998853
No 318
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=63.88 E-value=4.4 Score=38.30 Aligned_cols=49 Identities=18% Similarity=0.188 Sum_probs=37.0
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARR 554 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~v~~ 554 (706)
.||.+.++|++++ ..|+.+.+.+.++++.. ..++++.|+-|...+.+++
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~-~~v~~~~v~~d~~~~~~~~ 102 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQ-PNIELAIISKGRAEDDLRQ 102 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-TTEEEEEECHHHHHHHTTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHC-CCcEEEEEECCCCHHHHHH
Confidence 6899999999932 33599999999998763 4688999987755544443
No 319
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=62.39 E-value=12 Score=32.06 Aligned_cols=44 Identities=7% Similarity=0.005 Sum_probs=34.7
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
+.||.+.++|.+++ .+|+.+.+.+.++++.. ..+.++.|.-+..
T Consensus 21 ~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~ 65 (118)
T 2f51_A 21 EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKN 65 (118)
T ss_dssp HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTC
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCC
Confidence 36899999999954 55799999999998875 5678888877643
No 320
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=61.94 E-value=8.2 Score=35.12 Aligned_cols=45 Identities=11% Similarity=0.120 Sum_probs=35.3
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
..||.+.++|.+++ ..|+.+.+.+.+++++.+..+.++.|.-|..
T Consensus 21 ~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~ 66 (149)
T 3gix_A 21 TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQT 66 (149)
T ss_dssp CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTC
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcC
Confidence 46999999999943 3459999999999887555688888877643
No 321
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=61.71 E-value=13 Score=30.67 Aligned_cols=45 Identities=4% Similarity=-0.130 Sum_probs=34.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
..||.+.++|.+++ .+|+++.+.+.+++++. ..+.++.|.-++..
T Consensus 19 ~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~ 64 (107)
T 1gh2_A 19 AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQ 64 (107)
T ss_dssp TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSH
T ss_pred CCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCH
Confidence 47899999999954 55799999999998774 35777777766543
No 322
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=61.68 E-value=11 Score=32.32 Aligned_cols=45 Identities=7% Similarity=0.025 Sum_probs=34.7
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
.||.+.++|.+++ ..|+++.+.+.++++..+. +.++.|.-|...+
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~ 75 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQD 75 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH
Confidence 7999999999953 4469999999999876433 8888887775443
No 323
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=60.32 E-value=13 Score=33.44 Aligned_cols=43 Identities=14% Similarity=0.145 Sum_probs=34.8
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn 547 (706)
.||.+.++|.+++ ..|+.+.+.+.+++++.+..+.++.|.-|.
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~ 65 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE 65 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc
Confidence 5899999999943 446999999999988765678888887764
No 324
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=60.32 E-value=14 Score=30.70 Aligned_cols=44 Identities=14% Similarity=0.022 Sum_probs=33.6
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.||.+.++|.+++ .+|+++.+.+.+++++.+ .+.++.|..++..
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~ 71 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELK 71 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCH
Confidence 4899999998853 556999999999987744 6777777776543
No 325
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=60.23 E-value=5.4 Score=34.38 Aligned_cols=47 Identities=4% Similarity=-0.052 Sum_probs=35.4
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCC-ceeEEEeccCCch
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGI-ALEMLYVGKSNPK 549 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~-~~E~v~Vgkdn~~ 549 (706)
+..||.+.++|.+++ .+|+.+.+.+.++++.... .+.++.|.-|+..
T Consensus 30 l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~ 78 (121)
T 2j23_A 30 TGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS 78 (121)
T ss_dssp HSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH
T ss_pred HcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH
Confidence 568999999999853 5569999999988765322 3888888877543
No 326
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=60.08 E-value=6.4 Score=33.82 Aligned_cols=47 Identities=9% Similarity=-0.093 Sum_probs=35.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
..+|.+.++|.+++ ..|+++.+.+.++++..+..+.++.|.-+...+
T Consensus 33 ~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 80 (130)
T 2dml_A 33 QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQS 80 (130)
T ss_dssp TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHH
T ss_pred cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHH
Confidence 47899999999932 335999999999988755568888887775443
No 327
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=59.94 E-value=5.9 Score=31.63 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=38.6
Q ss_pred EEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCCCHH
Q 005245 350 LLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAIDPA 427 (706)
Q Consensus 350 lL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~id~~ 427 (706)
.++|++.|||.|.. +.|.++-.+. .+++++.|-+ |++. .
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~--------~~i~~~~vdi--------~~~~------------------~----- 43 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER--------DDFQYQYVDI--------RAEG------------------I----- 43 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH--------SSCEEEEECH--------HHHT------------------C-----
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC--------CCceEEEEec--------ccCh------------------H-----
Confidence 46789999999976 3455443321 2477777744 2211 0
Q ss_pred HHHHHHHhhC--CCCCcEEEEECCCCceec
Q 005245 428 VIRYAKEKWD--FRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 428 ~~r~ike~~~--~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.+.++ +.+.|++++ +|+.+.
T Consensus 44 ~~~~l~~~~~~~~~~vP~i~~---~g~~i~ 70 (85)
T 1ego_A 44 TKEDLQQKAGKPVETVPQIFV---DQQHIG 70 (85)
T ss_dssp CSHHHHHHTCCCSCCSCEEEE---TTEEEE
T ss_pred HHHHHHHHhCCCCceeCeEEE---CCEEEE
Confidence 0123556677 899999854 577663
No 328
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=63.40 E-value=2 Score=38.43 Aligned_cols=48 Identities=17% Similarity=0.252 Sum_probs=35.8
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHH-HHHHh--CCceeEEEeccCCchhhhhh
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGA-VARAA--GIALEMLYVGKSNPKEKARR 554 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~-I~~~~--~~~~E~v~Vgkdn~~e~v~~ 554 (706)
.||.+.|+|.+ .|| ++..+.+.+ ++++. +..++++.|+.|...+.+++
T Consensus 32 ~gk~vll~f~a--~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~ 85 (159)
T 2ls5_A 32 RGKVVMLQFTA--SWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLA 85 (159)
Confidence 79999999998 676 777777776 65542 46899999998866555544
No 329
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=58.81 E-value=7 Score=43.59 Aligned_cols=64 Identities=11% Similarity=-0.024 Sum_probs=44.8
Q ss_pred HHHHHhhcCCCceeeccCCCCCHHHHHHHHHhhCCCCCcEEEEECCCCcee----cccHHHHHHHhCcccccC
Q 005245 404 HKFEALQYMMPWFSVHHPSAIDPAVIRYAKEKWDFRKKPILVVLDPQGRVV----NQNALHMMWIWGSVAFPF 472 (706)
Q Consensus 404 ~~Fe~~~~~MPWyAVpf~~~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~----~~nA~~mI~~wG~~AFPF 472 (706)
..+..-+..+||.+|++-. .....|.++|++++.|+||+++++|++. ..+....+..| ...+|.
T Consensus 173 ~~~~ldl~~~~~v~v~~v~----~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~-l~~l~~ 240 (519)
T 3t58_A 173 REVTLDLSQYHAVAVRRVL----NTESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSY-LRGLPG 240 (519)
T ss_dssp HHHHHHTTTCTTEEEEEEE----TTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCSHHHHHHH-HTTSTT
T ss_pred HHHHHHhhccCCeeEEEec----CchHHHHHHcCCCCCCeEEEEeCCCceeecccccccHHHHHHH-HHHccC
Confidence 4556667889999999854 2234567778999999999999999864 33445555544 444444
No 330
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=58.77 E-value=13 Score=32.59 Aligned_cols=51 Identities=14% Similarity=-0.009 Sum_probs=35.5
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccC-Cchhhhhhh
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKS-NPKEKARRI 555 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkd-n~~e~v~~~ 555 (706)
.||.+.|+|.+.+ ..|+...+.+.++++.. +..+.++.|+.+ ++.+.+++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~ 80 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQY 80 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHH
Confidence 7999999998832 33588888888887763 346999999854 234444443
No 331
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=58.49 E-value=16 Score=33.34 Aligned_cols=46 Identities=7% Similarity=-0.063 Sum_probs=36.5
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
++.||.+.+||.+++ ..|+.|.+.+.+++++....+.++.|.-+..
T Consensus 61 ~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~ 107 (155)
T 2ppt_A 61 ERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAH 107 (155)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTS
T ss_pred HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCcc
Confidence 467899999999943 4469999999999887655688888877754
No 332
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.05 E-value=27 Score=31.17 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=19.2
Q ss_pred HHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 428 VIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 428 ~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+.+.+++...|.+++ +|+.+.
T Consensus 68 ~~~~l~~~~g~~~vP~l~i---~G~~ig 92 (130)
T 2cq9_A 68 FQDALYKMTGERTVPRIFV---NGTFIG 92 (130)
T ss_dssp HHHHHHHHHSSCCSSEEEE---TTEEEE
T ss_pred HHHHHHHHhCCCCcCEEEE---CCEEEc
Confidence 4566788889999999865 677764
No 333
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=57.90 E-value=11 Score=34.74 Aligned_cols=40 Identities=5% Similarity=-0.165 Sum_probs=32.3
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccC
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkd 546 (706)
.||.+.|+|.+ .|| +...+.+.+++++. +..++++.|+.|
T Consensus 46 ~gk~vll~F~a--twC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 46 RGFVCIVTNVA--SQCGKTEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeC--CCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 79999999998 565 77778888887763 346999999876
No 334
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=57.71 E-value=11 Score=33.69 Aligned_cols=46 Identities=9% Similarity=0.006 Sum_probs=34.7
Q ss_pred CccccccCceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCC
Q 005245 498 VIPTWIMEQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSN 547 (706)
Q Consensus 498 ~I~~~i~egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkdn 547 (706)
.++++ .||.+.|+|.+ .|| +.-.+.+.+++++. +..++++.|+.|.
T Consensus 25 ~l~~~--~gk~vlv~f~a--~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 74 (169)
T 2v1m_A 25 SLEKY--RGHVCLIVNVA--CKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQ 74 (169)
T ss_dssp EGGGG--TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred cHHHc--CCCEEEEEEee--ccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 34444 89999999998 665 77778888887753 3469999999763
No 335
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=56.30 E-value=13 Score=33.28 Aligned_cols=43 Identities=9% Similarity=0.016 Sum_probs=32.4
Q ss_pred CceEEEEEccCCh-hH-HHHHHHHHHHHHHHh-----CCceeEEEeccCC
Q 005245 505 EQKHICLYGGEDL-EW-VRKFTALMGAVARAA-----GIALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~-~W-ir~FT~~l~~I~~~~-----~~~~E~v~Vgkdn 547 (706)
.||.+.|||.+.+ .. |+...+.+.+++++. +..++++.|+.|.
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~ 74 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP 74 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC
Confidence 7999999999832 22 567777788876653 2589999999884
No 336
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=56.28 E-value=9.1 Score=34.70 Aligned_cols=44 Identities=27% Similarity=0.423 Sum_probs=33.0
Q ss_pred cCceEEEEEc-cCCh-hHHHHHHHHH---HHHHHHhCCceeEEEeccCC
Q 005245 504 MEQKHICLYG-GEDL-EWVRKFTALM---GAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 504 ~egK~I~LYg-g~d~-~Wir~FT~~l---~~I~~~~~~~~E~v~Vgkdn 547 (706)
..||.|.||| |+++ .+|+.+.+.+ .++++..+..+.++.|..+.
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~ 93 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQ 93 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCS
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCcc
Confidence 3799999999 5843 5569999888 77766555678888887664
No 337
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=56.27 E-value=10 Score=34.22 Aligned_cols=51 Identities=16% Similarity=0.063 Sum_probs=35.7
Q ss_pred CceE-EEEEcc-CCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKH-ICLYGG-EDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~-I~LYgg-~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||. +.|+|. +.+ ..|+...+.+.+++++. +..++++.|+.|++ +.+++..
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~-~~~~~~~ 81 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDI-NSHKRFK 81 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCH-HHHHHHH
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCH-HHHHHHH
Confidence 7887 888887 721 33577778888877653 45699999999864 4555444
No 338
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=55.52 E-value=18 Score=36.37 Aligned_cols=21 Identities=19% Similarity=0.461 Sum_probs=17.0
Q ss_pred HHHHhhCCC--CCcEEEEECCCCc
Q 005245 431 YAKEKWDFR--KKPILVVLDPQGR 452 (706)
Q Consensus 431 ~ike~~~~~--~iP~LVvL~pqGk 452 (706)
-|.+.|+++ +.|+|+++ ++|+
T Consensus 72 ~l~~~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 72 ELSEKYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp HHHHHTTCCGGGCSEEEEE-ETTC
T ss_pred HHHHHcCCCCCCCCEEEEE-eCCC
Confidence 366788999 99999999 4565
No 339
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=55.40 E-value=11 Score=31.35 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=32.8
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~ 549 (706)
.||.+.++|.+++ ..|+.+.+.+.+++++. ...+.++.|.-+...
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 66 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS 66 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH
Confidence 4899999999942 33599999999997752 335788888776543
No 340
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=54.67 E-value=12 Score=34.48 Aligned_cols=26 Identities=15% Similarity=0.130 Sum_probs=19.6
Q ss_pred HHHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 427 AVIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 427 ~~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
+..+.+.+.+++.++|.+++ +|+.+.
T Consensus 89 ~~~~~L~~~~g~~tvP~ifi---~G~~ig 114 (146)
T 2ht9_A 89 QFQDALYKMTGERTVPRIFV---NGTFIG 114 (146)
T ss_dssp HHHHHHHHHHSCCCSCEEEE---TTEEEE
T ss_pred HHHHHHHHHhCCCCcCeEEE---CCEEEe
Confidence 34567788889999999865 677663
No 341
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=54.53 E-value=11 Score=33.32 Aligned_cols=67 Identities=12% Similarity=0.186 Sum_probs=40.6
Q ss_pred EEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCCCHHHH
Q 005245 350 LLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAIDPAVI 429 (706)
Q Consensus 350 lL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~id~~~~ 429 (706)
..+|++.|||.|..- |.++.+++. ..+.++..|.+ |.+.+ ..+..
T Consensus 27 Vvvf~~~~Cp~C~~a-lk~~L~~~~------~~~i~~~~vdi--------d~~~~--------------------~~~~~ 71 (118)
T 3c1r_A 27 IFVASKTYCPYCHAA-LNTLFEKLK------VPRSKVLVLQL--------NDMKE--------------------GADIQ 71 (118)
T ss_dssp EEEEECSSCHHHHHH-HHHHHTTSC------CCGGGEEEEEG--------GGSTT--------------------HHHHH
T ss_pred EEEEEcCCCcCHHHH-HHHHHHHcC------CCCCCeEEEEC--------ccCCC--------------------hHHHH
Confidence 456899999998754 355544432 12345556655 22210 02456
Q ss_pred HHHHHhhCCCCCcEEEEECCCCcee
Q 005245 430 RYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 430 r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
+.+++.++.+..|.+.+ +|+.+
T Consensus 72 ~~l~~~~g~~tvP~vfi---~g~~i 93 (118)
T 3c1r_A 72 AALYEINGQRTVPNIYI---NGKHI 93 (118)
T ss_dssp HHHHHHHSCCSSCEEEE---TTEEE
T ss_pred HHHHHHhCCCCcCEEEE---CCEEE
Confidence 67778889999998755 66665
No 342
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=54.12 E-value=13 Score=33.21 Aligned_cols=43 Identities=14% Similarity=0.044 Sum_probs=33.7
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn 547 (706)
.||.+.|||.+.+ ..|+...+.+.+++++. +..++++.|+.|.
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 7999999998832 33588888888887764 3689999998874
No 343
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=53.99 E-value=16 Score=30.75 Aligned_cols=43 Identities=7% Similarity=-0.018 Sum_probs=32.9
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.||.+.++|.+++ .+|+++.+.+.+++++. .+.++.|.-+...
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~ 75 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLE 75 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccH
Confidence 7899999999953 55699999999887664 6777777766543
No 344
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=53.93 E-value=20 Score=31.19 Aligned_cols=44 Identities=9% Similarity=-0.005 Sum_probs=34.2
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.||.+.++|.+++ .+|+.+.+.+.+++++. ..+.++.|.-|...
T Consensus 45 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~v~~~~~~ 89 (139)
T 3d22_A 45 DGKIVLANFSARWCGPSRQIAPYYIELSENY-PSLMFLVIDVDELS 89 (139)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCcccH
Confidence 6999999999953 55699999999998774 35788888777543
No 345
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=53.87 E-value=17 Score=34.90 Aligned_cols=48 Identities=6% Similarity=-0.024 Sum_probs=37.9
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
++.||.+.|+|.+++ ..|+.+.+.+.++++..+..+.++.|.-+...+
T Consensus 27 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~ 75 (222)
T 3dxb_A 27 LKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG 75 (222)
T ss_dssp TTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTT
T ss_pred HhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHH
Confidence 457999999999943 446999999999988766668888888875543
No 346
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=53.28 E-value=11 Score=34.73 Aligned_cols=41 Identities=5% Similarity=-0.053 Sum_probs=32.3
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHhCCceeEEEeccCC
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~~~~~E~v~Vgkdn 547 (706)
.||.+.|+|.+ .|| +...+.+.+++++.+..++++.|+.|.
T Consensus 32 ~gk~vlv~F~a--~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~ 75 (188)
T 2cvb_A 32 HEPLLAVVFMC--NHCPYVKGSIGELVALAERYRGKVAFVGINAND 75 (188)
T ss_dssp CSSEEEEEEEC--SSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCC
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCc
Confidence 78999999998 565 777788888877644339999999863
No 347
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=53.01 E-value=16 Score=31.97 Aligned_cols=46 Identities=11% Similarity=-0.002 Sum_probs=35.5
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
+..||.+.++|.+++ .+|+.+.+.+.+++++. ..+.++.|.-+...
T Consensus 34 ~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~d~~~ 80 (125)
T 1r26_A 34 MSEDILTVAWFTAVWCGPCKTIERPMEKIAYEF-PTVKFAKVDADNNS 80 (125)
T ss_dssp HHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC-TTSEEEEEETTTCH
T ss_pred HccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC-CCCEEEEEECCCCH
Confidence 468999999999953 45699999999998774 35778888777543
No 348
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=52.76 E-value=1.2e+02 Score=27.90 Aligned_cols=95 Identities=21% Similarity=0.257 Sum_probs=51.0
Q ss_pred ecCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEE--ec--ccCCC------CcChhhHHH-HHHhh--
Q 005245 344 LRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWL--PI--VDRST------PWTEAKEHK-FEALQ-- 410 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwI--pi--Vd~s~------~w~D~de~~-Fe~~~-- 410 (706)
=.+|.++..|++.+||-|... +..+++ . ++..|+|+ |+ ..+.. -|--.++.+ |++++
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~-----~~~l~~----l-~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~ 81 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRL-----EHEFEK----M-TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRK 81 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHH-----HHHHTT----C-CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCChhHHHH-----HHHHhh----c-CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 357999999999999998753 233432 1 34666665 55 22100 011112222 33322
Q ss_pred cCCCceeeccCCC-CCHHHHHHHHHhhCCCCCcEEEEECCCCce
Q 005245 411 YMMPWFSVHHPSA-IDPAVIRYAKEKWDFRKKPILVVLDPQGRV 453 (706)
Q Consensus 411 ~~MPWyAVpf~~~-id~~~~r~ike~~~~~~iP~LVvL~pqGkv 453 (706)
...|= ..++- -....-..+-+.+++++.|++++ .+|+.
T Consensus 82 g~~~~---~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~ 120 (147)
T 3gv1_A 82 GKFPV---GGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRT 120 (147)
T ss_dssp CCCCT---TCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCE
T ss_pred CCCCC---ccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEE
Confidence 12220 11110 01233446668999999999998 57764
No 349
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=52.12 E-value=21 Score=32.54 Aligned_cols=45 Identities=7% Similarity=0.015 Sum_probs=33.5
Q ss_pred ceecCcEEEEEEecCCCChhHHH--HHHHHHHHHhhcccCCCCCeEEEEEec
Q 005245 342 DVLRRKSVLLLVSDLDVSNEELF--LLEQMYRESRQLSSRTESQYEVVWLPI 391 (706)
Q Consensus 342 s~L~gK~VlL~fSal~~~~~e~~--~L~~iY~elk~~~~~~~~~fEIVwIpi 391 (706)
..-.+|.+...|++.+||.|... .|.++.+++.+ .++..++|.|+
T Consensus 23 G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~-----~~~v~~~~~~~ 69 (175)
T 1z6m_A 23 GESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVK-----SGKVERIIKLF 69 (175)
T ss_dssp SCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEC
T ss_pred CCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhh-----CCcEEEEEEeC
Confidence 34568899999999999999874 56666666531 34688999876
No 350
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=52.02 E-value=33 Score=29.91 Aligned_cols=44 Identities=11% Similarity=-0.014 Sum_probs=33.8
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.++ +.++|.+++ .+|+.|.+.+.++++..+..+.++.|.-+...
T Consensus 50 ~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~ 94 (140)
T 1v98_A 50 APL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHP 94 (140)
T ss_dssp CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH
T ss_pred CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCH
Confidence 456 888888843 55799999999998876557888888877543
No 351
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=51.96 E-value=10 Score=36.56 Aligned_cols=40 Identities=8% Similarity=0.037 Sum_probs=32.0
Q ss_pred CceE-EEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccC
Q 005245 505 EQKH-ICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKS 546 (706)
Q Consensus 505 egK~-I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkd 546 (706)
.||. +.|+|.+ .|| +...+.+.+++++. +..++++.|+.|
T Consensus 57 ~gk~~vll~F~a--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d 101 (218)
T 3u5r_E 57 KDSPALLVAFIS--NRCPFVVLIREALAKFAGDYAGQGLAVVAINSN 101 (218)
T ss_dssp TTCSEEEEEECC--SSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECS
T ss_pred CCCCeEEEEEEC--CCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 7885 9999988 565 77788888887764 445999999996
No 352
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=51.46 E-value=24 Score=30.22 Aligned_cols=42 Identities=5% Similarity=0.051 Sum_probs=32.6
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhC--CceeEEEeccC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAG--IALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~--~~~E~v~Vgkd 546 (706)
.||.+.++|.+++ .+|+++.+.+.++++... ..+.++.|.-+
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~ 68 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT 68 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC
Confidence 5999999999953 446999999999987643 46777777655
No 353
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=51.04 E-value=19 Score=33.57 Aligned_cols=48 Identities=8% Similarity=-0.036 Sum_probs=36.8
Q ss_pred CceEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhh
Q 005245 505 EQKHICLYGG-EDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRI 555 (706)
Q Consensus 505 egK~I~LYgg-~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~ 555 (706)
.||.+.|||. + .|| +...+.+.+++++. +..++++.|+.|.+ +.+++-
T Consensus 44 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~-~~~~~~ 96 (195)
T 2bmx_A 44 PGKWRVVFFWPK--DFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSE-FAHFQW 96 (195)
T ss_dssp TTCEEEEEECSC--TTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHH
T ss_pred CCCcEEEEEEcC--CCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHH
Confidence 7999999998 8 676 88888888887653 45799999999863 444443
No 354
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=50.85 E-value=18 Score=30.42 Aligned_cols=43 Identities=5% Similarity=-0.038 Sum_probs=33.3
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCC-----ceeEEEeccC
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGI-----ALEMLYVGKS 546 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~-----~~E~v~Vgkd 546 (706)
..||.+.++|.+++ ..|+.|.+.+.++++..+. .+.++.|.-+
T Consensus 23 ~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~ 71 (121)
T 2djj_A 23 DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT 71 (121)
T ss_dssp CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT
T ss_pred cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc
Confidence 47899999999943 4469999999999886443 6777777665
No 355
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=50.53 E-value=39 Score=26.54 Aligned_cols=14 Identities=7% Similarity=0.050 Sum_probs=11.4
Q ss_pred EEEEecCCCChhHH
Q 005245 350 LLLVSDLDVSNEEL 363 (706)
Q Consensus 350 lL~fSal~~~~~e~ 363 (706)
.++|++.||++|..
T Consensus 3 v~~f~~~~C~~C~~ 16 (81)
T 1h75_A 3 ITIYTRNDCVQCHA 16 (81)
T ss_dssp EEEEECTTCHHHHH
T ss_pred EEEEcCCCChhHHH
Confidence 35689999999876
No 356
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=49.97 E-value=24 Score=30.83 Aligned_cols=43 Identities=16% Similarity=0.096 Sum_probs=32.0
Q ss_pred CceEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeEEEeccCCc
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALM---GAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l---~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
.||.+.|+|.+++ .+|+++.+.+ .++++..+ .+.++.|.-+..
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~ 76 (134)
T 2fwh_A 30 KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTAN 76 (134)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTC
T ss_pred cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCC
Confidence 4899999999953 5568888877 78877644 488888877643
No 357
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=49.62 E-value=30 Score=28.67 Aligned_cols=41 Identities=10% Similarity=-0.057 Sum_probs=31.5
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkd 546 (706)
.||.+.++|.+++ .+|+++.+.+.+++++.+ .+.++.|.-+
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~ 64 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCN 64 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecC
Confidence 5899999999954 556999999999987643 3666777665
No 358
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=49.39 E-value=16 Score=30.81 Aligned_cols=44 Identities=7% Similarity=0.111 Sum_probs=32.4
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn 547 (706)
+..+|.+.++|.+++ .+|+.+.+.+.++++..+ .+.++.|.-+.
T Consensus 16 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~ 60 (110)
T 2l6c_A 16 FEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEA 60 (110)
T ss_dssp HTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGG
T ss_pred HHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcC
Confidence 457888999999953 556999999999876632 56677766553
No 359
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=49.17 E-value=25 Score=32.71 Aligned_cols=43 Identities=14% Similarity=0.077 Sum_probs=31.3
Q ss_pred ecCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEec
Q 005245 344 LRRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPI 391 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpi 391 (706)
-.||.+.+.|++.|||.|... ....+++.+. ..++.+++.+|+
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~--~~~l~~l~~~---~~~~v~~~~~~~ 65 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAI--EPMVEDWAKT---APQDVVLKQVPI 65 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHH--HHHHHHHHHT---CCTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCCccHHHh--hHHHHHHHHH---CCCCeEEEEEec
Confidence 358999999999999999864 2344555432 234788999998
No 360
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=48.94 E-value=41 Score=28.78 Aligned_cols=44 Identities=7% Similarity=-0.004 Sum_probs=32.5
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.+|.|.++|.+++ ..|+.+.+.+.++++.. ..+..+.|.-|...
T Consensus 19 ~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~d~~~ 63 (105)
T 3zzx_A 19 GNKLVVIDFYATWCGPCKMIAPKLEELSQSM-SDVVFLKVDVDECE 63 (105)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHC-TTEEEEEEETTTCH
T ss_pred CCCEEEEEEECCCCCCccCCCcchhhhhhcc-CCeEEEEEecccCH
Confidence 5799999999943 44599999999998763 34666667666443
No 361
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=47.61 E-value=12 Score=33.34 Aligned_cols=41 Identities=10% Similarity=0.093 Sum_probs=31.9
Q ss_pred CceEEEEEccCChhH----HHHHHHHHHHHHHHhC----CceeEEEeccCC
Q 005245 505 EQKHICLYGGEDLEW----VRKFTALMGAVARAAG----IALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~~W----ir~FT~~l~~I~~~~~----~~~E~v~Vgkdn 547 (706)
.||.+.|||.+ .| |+...+.+.+++++.+ ..++++.|+.|.
T Consensus 34 ~gk~vll~f~~--~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~ 82 (172)
T 2k6v_A 34 QDKVVLLFFGF--TRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP 82 (172)
T ss_dssp TTSEEEEEEEC--TTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT
T ss_pred CCCEEEEEEEC--CCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC
Confidence 79999999998 55 5667777777766543 379999999774
No 362
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=47.53 E-value=29 Score=29.91 Aligned_cols=42 Identities=10% Similarity=0.008 Sum_probs=32.9
Q ss_pred CceEEEEEccCC-------h-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 005245 505 EQKHICLYGGED-------L-EWVRKFTALMGAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d-------~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkd 546 (706)
.||.+.++|.++ + ..|+.+.+.+.+++++.+..+.++.|.-+
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~ 72 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVG 72 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECC
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECC
Confidence 389999999994 3 34599999999998776557888887764
No 363
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=47.38 E-value=14 Score=33.19 Aligned_cols=43 Identities=9% Similarity=-0.038 Sum_probs=34.2
Q ss_pred CceEEEEEccCCh--hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 505 EQKHICLYGGEDL--EWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 505 egK~I~LYgg~d~--~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
.||.+.|+|.+.+ ..|+...+.+.+++++. ..++++.|+.|.+
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~ 87 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLP 87 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSG
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCH
Confidence 7899999998721 34588888888887776 7899999999854
No 364
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=47.29 E-value=7.2 Score=35.07 Aligned_cols=50 Identities=8% Similarity=-0.006 Sum_probs=34.6
Q ss_pred CceEEEEEccCChhHH----HHHHHHHHHHHHH---hCCceeEEEeccCC---chhhhhhhh
Q 005245 505 EQKHICLYGGEDLEWV----RKFTALMGAVARA---AGIALEMLYVGKSN---PKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi----r~FT~~l~~I~~~---~~~~~E~v~Vgkdn---~~e~v~~~~ 556 (706)
.||.+.|+|.+ .|| +...+.+.+++++ .+..++++.|+.|. ..+.+++..
T Consensus 32 ~gk~vll~f~~--~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~ 91 (174)
T 1xzo_A 32 KGEVWLADFIF--TNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFA 91 (174)
T ss_dssp TTCCEEEEEEC--SCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHH
T ss_pred CCCEEEEEEEc--CCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHH
Confidence 79999999988 665 5666777777553 23369999999883 334444433
No 365
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=46.72 E-value=65 Score=24.57 Aligned_cols=14 Identities=7% Similarity=-0.016 Sum_probs=11.2
Q ss_pred EEEEecCCCChhHH
Q 005245 350 LLLVSDLDVSNEEL 363 (706)
Q Consensus 350 lL~fSal~~~~~e~ 363 (706)
..+|++.||++|..
T Consensus 3 i~~y~~~~C~~C~~ 16 (75)
T 1r7h_A 3 ITLYTKPACVQCTA 16 (75)
T ss_dssp EEEEECTTCHHHHH
T ss_pred EEEEeCCCChHHHH
Confidence 35689999999876
No 366
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=46.39 E-value=35 Score=27.87 Aligned_cols=45 Identities=2% Similarity=-0.039 Sum_probs=33.6
Q ss_pred ceEEEEEccCCh-hHHHHHHHHHHHHHHHhC---CceeEEEeccCCchh
Q 005245 506 QKHICLYGGEDL-EWVRKFTALMGAVARAAG---IALEMLYVGKSNPKE 550 (706)
Q Consensus 506 gK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~---~~~E~v~Vgkdn~~e 550 (706)
+|.+.++|.+++ ..|+.+.+.+.++++... ..+.++.|..+...+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 69 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN 69 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh
Confidence 788999998843 556999999999977532 468888887775543
No 367
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=52.14 E-value=4.2 Score=32.98 Aligned_cols=44 Identities=9% Similarity=0.021 Sum_probs=31.5
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn 547 (706)
..||.+.++|.+++ .+|+++.+.+.++++..+..+.++.|.-+.
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 61 (106)
T 2yj7_A 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDE 61 (106)
Confidence 47899999999832 334888888888877655467777776653
No 368
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=46.28 E-value=27 Score=30.54 Aligned_cols=47 Identities=9% Similarity=0.027 Sum_probs=34.3
Q ss_pred eEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEecc--CCchhhhhhh
Q 005245 507 KHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGK--SNPKEKARRI 555 (706)
Q Consensus 507 K~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgk--dn~~e~v~~~ 555 (706)
|.+.|+|.+.+ ..|+...+.+.+++++. .++++.|+. +...+.+++.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~ 80 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEY 80 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHH
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHH
Confidence 88888888742 45688889999988776 888999988 3444444443
No 369
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=45.99 E-value=15 Score=32.56 Aligned_cols=51 Identities=6% Similarity=-0.106 Sum_probs=35.3
Q ss_pred Cce-EEEEEc-cCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQK-HICLYG-GEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK-~I~LYg-g~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.|| .+.|+| ++.+ ..|+...+.+.+++++. +..++++.|+.|++ +.+++..
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~-~~~~~~~ 88 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPP-PTHKIWA 88 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCH-HHHHHHH
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCH-HHHHHHH
Confidence 687 888888 4721 33577788888887664 35799999999864 4444433
No 370
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=45.69 E-value=23 Score=32.81 Aligned_cols=40 Identities=5% Similarity=-0.193 Sum_probs=31.9
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccC
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkd 546 (706)
.||.+.|+|.+ .|| +.-.+.+.+++++. +..++++.|+.|
T Consensus 48 ~Gk~vlv~F~a--twC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVA--SQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEec--CCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 79999999988 665 67778888887653 346999999876
No 371
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=44.65 E-value=14 Score=33.99 Aligned_cols=45 Identities=13% Similarity=-0.031 Sum_probs=33.6
Q ss_pred ccccccCceEEEEEccCChhHH----HHHHHHHHHHHHHh---CCceeEEEeccCC
Q 005245 499 IPTWIMEQKHICLYGGEDLEWV----RKFTALMGAVARAA---GIALEMLYVGKSN 547 (706)
Q Consensus 499 I~~~i~egK~I~LYgg~d~~Wi----r~FT~~l~~I~~~~---~~~~E~v~Vgkdn 547 (706)
++++ .||.+.|||.. .|| +.-...+.+++++. +..++++.|+.|.
T Consensus 23 l~~~--~Gk~vll~F~~--t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~ 74 (170)
T 3me7_A 23 LKNL--KGKPIILSPIY--THCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDP 74 (170)
T ss_dssp GGGG--TTSCEEEEEEC--TTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCT
T ss_pred hHHh--CCCEEEEEEEC--CCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCC
Confidence 3444 69999999988 555 56667777776653 4789999999874
No 372
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=44.53 E-value=38 Score=28.64 Aligned_cols=41 Identities=10% Similarity=-0.048 Sum_probs=31.2
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkd 546 (706)
.||.+.++|.+++ .+|+++.+.+.+++++.. .+.++.|..+
T Consensus 36 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~ 77 (124)
T 1faa_A 36 GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCN 77 (124)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecC
Confidence 6899999999853 556999999999987633 4666666655
No 373
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=44.24 E-value=20 Score=31.65 Aligned_cols=43 Identities=7% Similarity=-0.129 Sum_probs=33.2
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHH-hCCceeEEEeccC
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARA-AGIALEMLYVGKS 546 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~-~~~~~E~v~Vgkd 546 (706)
..||.+.|+|.+.+ ..|+.+.+.+.+++++ .+..++++.|+.+
T Consensus 36 ~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~ 80 (164)
T 2h30_A 36 KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASP 80 (164)
T ss_dssp CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECT
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcC
Confidence 38999999999842 3458888888888765 2456999999875
No 374
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=43.91 E-value=22 Score=32.88 Aligned_cols=45 Identities=9% Similarity=-0.061 Sum_probs=32.8
Q ss_pred CceEEEEEccCC--hhHHHHHHHHHHHHHH---HhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGED--LEWVRKFTALMGAVAR---AAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d--~~Wir~FT~~l~~I~~---~~~~~~E~v~Vgkdn~~ 549 (706)
.||.+.|||+.- ..||..-+..+.++.+ +.+..+.+|+|+-|..+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~ 80 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDL 80 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTT
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCccc
Confidence 899999999853 2578666666666644 34778999999987433
No 375
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=49.89 E-value=4.8 Score=34.70 Aligned_cols=44 Identities=9% Similarity=0.169 Sum_probs=32.1
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeEEEeccC
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALM---GAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l---~~I~~~~~~~~E~v~Vgkd 546 (706)
..+||.+.|||.+++ .+|+.+.+.+ .++++..+..+.++.|..+
T Consensus 16 ~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 63 (130)
T 2lst_A 16 QAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVD 63 (130)
Confidence 458999999999932 3348888887 7777665556777777664
No 376
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=43.59 E-value=34 Score=33.01 Aligned_cols=53 Identities=6% Similarity=-0.116 Sum_probs=38.5
Q ss_pred CceEEEEEccC-C-hhHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhhhh
Q 005245 505 EQKHICLYGGE-D-LEWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRIIST 558 (706)
Q Consensus 505 egK~I~LYgg~-d-~~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~~~ 558 (706)
.||.+.|+|.+ . -..|+.-.+.+.+++++. +..++++.|+.|.+. .+++..+.
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~-~~~~~~~~ 123 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQY-SHLAWDNL 123 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH-HHHHHHHS
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHH-HHHHHHHH
Confidence 79999999985 3 366788888888887763 456999999998653 33443333
No 377
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.44 E-value=16 Score=32.00 Aligned_cols=43 Identities=9% Similarity=0.086 Sum_probs=33.3
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHhC-CceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGAVARAAG-IALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~~-~~~E~v~Vgkdn~~ 549 (706)
.+|.+.++|.+ .|| +.+.+.+.+++++.+ ..+.++.|.-+...
T Consensus 25 ~~~~vlv~f~a--~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~ 71 (137)
T 2dj0_A 25 KRVTWIVEFFA--NWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT 71 (137)
T ss_dssp TTSCEEEEECC--TTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH
T ss_pred CCCEEEEEEEC--CCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH
Confidence 55689999999 565 999999999987754 47888888776443
No 378
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=43.24 E-value=41 Score=31.05 Aligned_cols=50 Identities=14% Similarity=0.113 Sum_probs=33.5
Q ss_pred CccccccCceEEEEEcc-CC-hhHHHHHHHHHHHHHHH-hCCceeEEEeccCCch
Q 005245 498 VIPTWIMEQKHICLYGG-ED-LEWVRKFTALMGAVARA-AGIALEMLYVGKSNPK 549 (706)
Q Consensus 498 ~I~~~i~egK~I~LYgg-~d-~~Wir~FT~~l~~I~~~-~~~~~E~v~Vgkdn~~ 549 (706)
.++++ .||++.|||. +. -..|+.=.+.+.+++++ .+..++++.|+.|.++
T Consensus 45 ~l~d~--~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~ 97 (179)
T 3ixr_A 45 TLSDY--TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVK 97 (179)
T ss_dssp CGGGG--TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHH
T ss_pred eHHHH--CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 34454 7999999887 62 23345555666666554 3567999999998653
No 379
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=42.83 E-value=24 Score=33.03 Aligned_cols=52 Identities=15% Similarity=-0.003 Sum_probs=36.5
Q ss_pred CceEEEEEcc-CCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhhh
Q 005245 505 EQKHICLYGG-EDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRIIS 557 (706)
Q Consensus 505 egK~I~LYgg-~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~~ 557 (706)
.||.+.|+|. +++ ..|+...+.+.+++++. +..++++.|+.|.+ +.+++.++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~-~~~~~~~~ 87 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQ-FTHLAWIN 87 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHHT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHHH
Confidence 7899999998 832 33577777888776653 45799999999864 33444333
No 380
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=42.79 E-value=12 Score=33.93 Aligned_cols=45 Identities=13% Similarity=-0.042 Sum_probs=29.8
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeEEEeccCCc
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALM---GAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l---~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
.+||.|.|+|.+.+ .+|+.+...+ .++++..+..+.++.|.-|..
T Consensus 45 ~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~ 93 (172)
T 3f9u_A 45 QHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNK 93 (172)
T ss_dssp HTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCC
T ss_pred HcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcc
Confidence 48999999999954 5568773332 344333333788888887743
No 381
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=42.33 E-value=38 Score=29.00 Aligned_cols=45 Identities=4% Similarity=-0.050 Sum_probs=33.8
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHH-----hCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARA-----AGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~-----~~~~~E~v~Vgkdn~~ 549 (706)
.+|.+.++|.+.+ ..|+.+.+.+.++++. .+..+.++.|.-+..+
T Consensus 32 ~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~ 82 (127)
T 3h79_A 32 PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP 82 (127)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH
T ss_pred CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH
Confidence 6899999999943 4459999999998764 2356888888777543
No 382
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.67 E-value=45 Score=28.35 Aligned_cols=44 Identities=7% Similarity=-0.043 Sum_probs=31.8
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhC-CceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAG-IALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~-~~~E~v~Vgkdn~~ 549 (706)
.++ +.++|.+++ ..|+++.+.+.++++... ..+.++.|.-+...
T Consensus 22 ~~~-vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~ 67 (126)
T 1x5e_A 22 EGD-WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP 67 (126)
T ss_dssp SSE-EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH
T ss_pred CCC-EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH
Confidence 455 788888843 556999999999987643 46888888766443
No 383
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=41.32 E-value=27 Score=32.19 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=30.2
Q ss_pred ecCcEEEEEEecCCCChhHHH--HHHHHHHHHhhcccCCCCCeEEEEEec
Q 005245 344 LRRKSVLLLVSDLDVSNEELF--LLEQMYRESRQLSSRTESQYEVVWLPI 391 (706)
Q Consensus 344 L~gK~VlL~fSal~~~~~e~~--~L~~iY~elk~~~~~~~~~fEIVwIpi 391 (706)
+.+|.++.+|++.+||.|... .|.++.++. +.+++++++|+
T Consensus 23 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~-------~~~v~~~~~p~ 65 (193)
T 2rem_A 23 LAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQ-------AKDVRFTLVPA 65 (193)
T ss_dssp CTTCEEEEEEECTTCHHHHHHHHHHHHHHHTS-------CTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCChhHhhhhHHHHHHHHhc-------CCceEEEEeCc
Confidence 468889999999999999874 454443332 34688899997
No 384
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=41.29 E-value=13 Score=34.74 Aligned_cols=52 Identities=6% Similarity=-0.013 Sum_probs=38.1
Q ss_pred CceEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhhhhh
Q 005245 505 EQKHICLYGG-EDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRIISTI 559 (706)
Q Consensus 505 egK~I~LYgg-~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~~~i 559 (706)
.||.+.|||. + .|| +...+.+.+++++. +..++++.|+.|.+ +.+++-.+.+
T Consensus 32 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~-~~~~~~~~~~ 88 (198)
T 1zof_A 32 GKNGVILFFWPK--DFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSE-QVHFAWKNTP 88 (198)
T ss_dssp CSSEEEEEECSC--TTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHTSC
T ss_pred CCCcEEEEEECC--CCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCH-HHHHHHHHhh
Confidence 6899999998 8 665 77778888876653 34799999999864 4555544443
No 385
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=41.04 E-value=43 Score=29.96 Aligned_cols=43 Identities=5% Similarity=0.025 Sum_probs=33.3
Q ss_pred ceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 506 QKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 506 gK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
||.+.++|.+++ .+|+++.+.+.++++.. ..+.++.|.-+...
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~~~ 75 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGVP 75 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSH
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCCCH
Confidence 899999999953 55699999999998773 45777777776543
No 386
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=40.94 E-value=18 Score=33.91 Aligned_cols=44 Identities=11% Similarity=-0.053 Sum_probs=31.1
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeEEEeccCC
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALM---GAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l---~~I~~~~~~~~E~v~Vgkdn 547 (706)
++||.|+||+++++ .||+.|.... .+|++..+.+|-.+.+-.++
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~ 87 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDS 87 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSS
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCC
Confidence 47999999999975 7788886543 45554444477777776654
No 387
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=40.84 E-value=17 Score=33.50 Aligned_cols=42 Identities=7% Similarity=-0.061 Sum_probs=33.2
Q ss_pred CceEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCCc
Q 005245 505 EQKHICLYGG-EDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSNP 548 (706)
Q Consensus 505 egK~I~LYgg-~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkdn~ 548 (706)
.||.+.|||. + .|| +...+.+.+++++. +..++++.|+.|.+
T Consensus 30 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~ 76 (187)
T 1we0_A 30 KGKWSIVVFYPA--DFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTH 76 (187)
T ss_dssp SSSEEEEEECSC--TTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred CCCCEEEEEECC--CCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCH
Confidence 7899999998 8 676 77777888776653 34799999999864
No 388
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=40.50 E-value=40 Score=34.05 Aligned_cols=21 Identities=10% Similarity=0.363 Sum_probs=17.3
Q ss_pred HHHHhhCCC--CCcEEEEECCCCce
Q 005245 431 YAKEKWDFR--KKPILVVLDPQGRV 453 (706)
Q Consensus 431 ~ike~~~~~--~iP~LVvL~pqGkv 453 (706)
-|.+.|+++ +.|+|+++- |+.
T Consensus 84 ~la~~~~V~~~~~PTl~~F~--G~~ 106 (248)
T 2c0g_A 84 ALGDRYKVDDKNFPSIFLFK--GNA 106 (248)
T ss_dssp HHHHHTTCCTTSCCEEEEES--SSS
T ss_pred HHHHHhCCCcCCCCeEEEEe--CCc
Confidence 456778999 999999996 873
No 389
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=40.43 E-value=40 Score=31.83 Aligned_cols=48 Identities=6% Similarity=-0.089 Sum_probs=37.5
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
+..||.+.++|.+++ ..|+.+.+.+.++++..+..+.++.|.-+...+
T Consensus 111 ~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~ 159 (210)
T 3apq_A 111 VNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRM 159 (210)
T ss_dssp HHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH
T ss_pred HccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHH
Confidence 458999999999953 456999999999988765568888888775543
No 390
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=39.72 E-value=8.6 Score=38.90 Aligned_cols=8 Identities=50% Similarity=1.456 Sum_probs=3.3
Q ss_pred eecCCCCc
Q 005245 686 VVCAECGR 693 (706)
Q Consensus 686 i~CpeC~R 693 (706)
+.||+|||
T Consensus 223 v~Cp~CgR 230 (256)
T 3na7_A 223 ITCPYCGR 230 (256)
T ss_dssp EECTTTCC
T ss_pred EECCCCCe
Confidence 34444444
No 391
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=39.66 E-value=28 Score=32.79 Aligned_cols=51 Identities=12% Similarity=-0.006 Sum_probs=36.2
Q ss_pred CceEEEEEcc-CCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGG-EDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg-~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|||. +++ .-|+...+.+.+++++. +..++++.|+.|.+ +.+++-.
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~-~~~~~~~ 88 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSE-YSHLAWT 88 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHH
Confidence 6899999998 732 33577777888776653 45799999999864 3444433
No 392
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=38.84 E-value=35 Score=32.73 Aligned_cols=40 Identities=13% Similarity=-0.042 Sum_probs=32.3
Q ss_pred CceEEEEEccCChhHH---HHHHHHHHHHHHHh-CCceeEEEeccC
Q 005245 505 EQKHICLYGGEDLEWV---RKFTALMGAVARAA-GIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkd 546 (706)
.||.+.|+|.+ .|| ++-.+.+.+++++. +..++++.|+.|
T Consensus 46 ~Gk~vlv~Fwa--twC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVA--SLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEEC--SSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEEC--CCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 89999999998 675 77678888887753 346999999876
No 393
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=38.63 E-value=37 Score=35.96 Aligned_cols=40 Identities=10% Similarity=-0.096 Sum_probs=32.4
Q ss_pred CceEEEEEccCChhH---HHHHHHHHHHHHHHh-CCceeEEEeccC
Q 005245 505 EQKHICLYGGEDLEW---VRKFTALMGAVARAA-GIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~~W---ir~FT~~l~~I~~~~-~~~~E~v~Vgkd 546 (706)
.||.+.|+|.+ .| |+...+.+.+++++. +..++++.|+.|
T Consensus 81 ~GK~vLl~F~a--twC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d 124 (352)
T 2hyx_A 81 RGKVVLIDFWA--YSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTP 124 (352)
T ss_dssp TTSEEEEEEEC--TTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEEC--CCChhHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 79999999998 56 588888888887764 347999999865
No 394
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=38.62 E-value=23 Score=34.52 Aligned_cols=51 Identities=12% Similarity=-0.006 Sum_probs=36.6
Q ss_pred CceEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhhhh
Q 005245 505 EQKHICLYGG-EDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRIIST 558 (706)
Q Consensus 505 egK~I~LYgg-~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~~~ 558 (706)
.||.+.|||. + .|| +.-.+.+.+++++. +..++++.|+.|.+. .+++-.+.
T Consensus 55 ~Gk~vvl~F~pa--twCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~-~~~~~~~~ 110 (221)
T 2c0d_A 55 GQKYCCLLFYPL--NYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVY-SHLAWKNM 110 (221)
T ss_dssp TTCEEEEEECCC--CTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHH-HHHHHHHS
T ss_pred CCCeEEEEEEcC--CCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHH
Confidence 6899999998 8 676 66677777776642 357999999998653 34444433
No 395
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=38.58 E-value=23 Score=32.51 Aligned_cols=43 Identities=5% Similarity=0.038 Sum_probs=31.2
Q ss_pred Cce-EEEEEccCCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCC
Q 005245 505 EQK-HICLYGGEDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSN 547 (706)
Q Consensus 505 egK-~I~LYgg~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn 547 (706)
.|| .+.|+|.+.+ ..|+...+.+.+++++. +..++++.|+.|.
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~ 89 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSND 89 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSC
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCc
Confidence 677 4899998832 33578888888887653 3469999999863
No 396
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=38.37 E-value=49 Score=29.38 Aligned_cols=55 Identities=9% Similarity=0.029 Sum_probs=36.5
Q ss_pred ccccccCceEEEEEccC-C-hhHHHHHHHHHHHHHHH-hCCceeEEEeccCCchhhhhhhh
Q 005245 499 IPTWIMEQKHICLYGGE-D-LEWVRKFTALMGAVARA-AGIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 499 I~~~i~egK~I~LYgg~-d-~~Wir~FT~~l~~I~~~-~~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
++++ .||.+.|||.. . -..|+.-.+.+.+++++ .+..++++.|+.|.+ +.+++..
T Consensus 30 l~~~--~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~-~~~~~~~ 87 (163)
T 3gkn_A 30 LRAH--AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSV-KSHDNFC 87 (163)
T ss_dssp SGGG--TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHH
T ss_pred HHHh--CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHH
Confidence 3444 78988888864 2 24567767777777664 245699999999843 4444443
No 397
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=37.82 E-value=31 Score=33.18 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=36.3
Q ss_pred CceEEEEEcc-CChhHH---HHHHHHHHHHHHH-hCCceeEEEeccCCchhhhhhhhhhh
Q 005245 505 EQKHICLYGG-EDLEWV---RKFTALMGAVARA-AGIALEMLYVGKSNPKEKARRIISTI 559 (706)
Q Consensus 505 egK~I~LYgg-~d~~Wi---r~FT~~l~~I~~~-~~~~~E~v~Vgkdn~~e~v~~~~~~i 559 (706)
.||.+.|||. + .|| +.-.+.+.+++++ .+..++++.|+.|.+. .+++-.+..
T Consensus 47 ~Gk~vvl~F~pa--t~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~-~~~~~~~~~ 103 (211)
T 2pn8_A 47 RGKYLVFFFYPL--DFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQF-THLAWINTP 103 (211)
T ss_dssp TTSEEEEEECSC--TTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH-HHHHHHTSC
T ss_pred CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHH-HHHHHHHHh
Confidence 7999999998 7 565 5555666666654 2468999999998653 445444433
No 398
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=37.35 E-value=53 Score=26.05 Aligned_cols=33 Identities=6% Similarity=0.049 Sum_probs=21.6
Q ss_pred EEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEec
Q 005245 350 LLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPI 391 (706)
Q Consensus 350 lL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpi 391 (706)
..+|+..|||.|..- ..+-++ .+-+|+++.|.+
T Consensus 6 v~ly~~~~Cp~C~~~--~~~L~~-------~~i~~~~~~vd~ 38 (89)
T 3msz_A 6 VKIYTRNGCPYCVWA--KQWFEE-------NNIAFDETIIDD 38 (89)
T ss_dssp EEEEECTTCHHHHHH--HHHHHH-------TTCCCEEEECCS
T ss_pred EEEEEcCCChhHHHH--HHHHHH-------cCCCceEEEeec
Confidence 457899999998763 222233 245699888743
No 399
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=37.20 E-value=26 Score=27.37 Aligned_cols=40 Identities=3% Similarity=-0.056 Sum_probs=28.3
Q ss_pred EEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 510 CLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 510 ~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.++|++++ .+|+++.+.+.+++++.+..++++.|.-+...
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~ 45 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDR 45 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCG
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCH
Confidence 45566622 44599999999998876667888888776443
No 400
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=37.20 E-value=1.5e+02 Score=25.16 Aligned_cols=79 Identities=9% Similarity=-0.016 Sum_probs=44.2
Q ss_pred CeEEEEEecccCCCCcChhhHHHHHHhhc-CCCceeecc---CC-CCCHHHHHHHHHhhCCCCCcEEEEECCCCceeccc
Q 005245 383 QYEVVWLPIVDRSTPWTEAKEHKFEALQY-MMPWFSVHH---PS-AIDPAVIRYAKEKWDFRKKPILVVLDPQGRVVNQN 457 (706)
Q Consensus 383 ~fEIVwIpiVd~s~~w~D~de~~Fe~~~~-~MPWyAVpf---~~-~id~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~n 457 (706)
+|+|+... ..++.++.+.. .-|=+.+=- |+ .-..+..+.|++. .+.|++++-+......-..
T Consensus 29 g~~v~~~~----------~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~---~~~~ii~ls~~~~~~~~~~ 95 (140)
T 3h5i_A 29 GYTVEIAL----------TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQI---SELPVVFLTAHTEPAVVEK 95 (140)
T ss_dssp TCEEEEES----------SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHH---CCCCEEEEESSSSCCCCGG
T ss_pred CCEEEEec----------ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhC---CCCCEEEEECCCCHHHHHH
Confidence 48888652 23445566655 455555422 21 1123456666653 6889888887655433334
Q ss_pred HHHHHHHhCcccc---cCChhhHH
Q 005245 458 ALHMMWIWGSVAF---PFSVAREE 478 (706)
Q Consensus 458 A~~mI~~wG~~AF---PFT~~r~e 478 (706)
++ ..|+++| ||+.+++.
T Consensus 96 ~~----~~g~~~~l~KP~~~~~l~ 115 (140)
T 3h5i_A 96 IR----SVTAYGYVMKSATEQVLI 115 (140)
T ss_dssp GG----GSCEEEEEETTCCHHHHH
T ss_pred HH----hCCCcEEEeCCCCHHHHH
Confidence 43 3588887 66655443
No 401
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=36.43 E-value=19 Score=35.50 Aligned_cols=44 Identities=9% Similarity=0.043 Sum_probs=35.8
Q ss_pred CceEEEEEccCChhH---HHHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 505 EQKHICLYGGEDLEW---VRKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 505 egK~I~LYgg~d~~W---ir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
.||.|.++|.+ .| |+.+.+.+.++++..+..+.++.|.-+...+
T Consensus 25 ~~~~v~v~f~a--~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~ 71 (287)
T 3qou_A 25 MTTPVLFYFWS--ERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQM 71 (287)
T ss_dssp TTSCEEEEEEC--TTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHH
T ss_pred CCCeEEEEEEC--CCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHH
Confidence 49999999999 56 4999999999988766678888888775443
No 402
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=36.15 E-value=20 Score=33.39 Aligned_cols=50 Identities=10% Similarity=-0.031 Sum_probs=35.9
Q ss_pred CceEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhhh
Q 005245 505 EQKHICLYGG-EDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRIIS 557 (706)
Q Consensus 505 egK~I~LYgg-~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~~ 557 (706)
.||.+.|+|. + .|| +...+.+.+++++. +..++++.|+.|.+ +.+++-.+
T Consensus 30 ~gk~vvl~F~~a--~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~-~~~~~~~~ 84 (192)
T 2h01_A 30 GKKYVLLYFYPL--DFTFVCPSEIIALDKALDSFKERNVELLGCSVDSK-FTHLAWKK 84 (192)
T ss_dssp TTCEEEEEECSC--SSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHT
T ss_pred CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCH-HHHHHHHH
Confidence 7899999998 8 565 77777777776653 35799999999864 34444333
No 403
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=35.41 E-value=10 Score=31.50 Aligned_cols=44 Identities=7% Similarity=-0.004 Sum_probs=32.0
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhC---CceeEEEeccC
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAG---IALEMLYVGKS 546 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~---~~~E~v~Vgkd 546 (706)
+..||.+.++|.+++ .+|++|.+.+.++++..+ ..+.++.|..+
T Consensus 21 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~ 68 (120)
T 1mek_A 21 LAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDAT 68 (120)
T ss_dssp HHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETT
T ss_pred HccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCC
Confidence 568999999999942 445899999998877532 45666666655
No 404
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=35.40 E-value=11 Score=32.17 Aligned_cols=44 Identities=14% Similarity=0.016 Sum_probs=32.8
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.||.+.+||.+++ .+|+++.+.+.++++..+ .+.++.|.-++..
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~ 79 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELK 79 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSG
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchH
Confidence 5899999999832 335889999999877643 5777888776543
No 405
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=35.20 E-value=32 Score=33.05 Aligned_cols=52 Identities=13% Similarity=-0.052 Sum_probs=36.2
Q ss_pred CceEEEEEcc-CCh-hHHHHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhhh
Q 005245 505 EQKHICLYGG-EDL-EWVRKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRIIS 557 (706)
Q Consensus 505 egK~I~LYgg-~d~-~Wir~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~~ 557 (706)
.||.+.|||. +++ .-|+.-.+.+.+++++. +..++++.|+.|.+ +.+++-.+
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~~ 105 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSK-YTHLAWKK 105 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCH-HHHHHHHS
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHH
Confidence 7899999998 732 33577777777776653 35799999999865 34444333
No 406
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=34.49 E-value=40 Score=31.70 Aligned_cols=41 Identities=20% Similarity=0.161 Sum_probs=31.2
Q ss_pred CceEEEEEccCChhHH----HHHHHHHHHHHHHh----CCceeEEEeccCC
Q 005245 505 EQKHICLYGGEDLEWV----RKFTALMGAVARAA----GIALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~~Wi----r~FT~~l~~I~~~~----~~~~E~v~Vgkdn 547 (706)
.||.+.|+|.+ .|| +...+.+.+++++. +..++++.|+.|.
T Consensus 40 ~Gk~vlv~F~a--t~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 40 LGKFSIIYFGF--SNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp TTSCEEEEEEC--TTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCCEEEEEEEC--CCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 79999999998 564 66667777765432 4689999999884
No 407
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=34.49 E-value=24 Score=32.46 Aligned_cols=41 Identities=20% Similarity=0.035 Sum_probs=33.7
Q ss_pred CceEEEEEccCChhH----HHHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 505 EQKHICLYGGEDLEW----VRKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 505 egK~I~LYgg~d~~W----ir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
.||.+.|||.+ .| |+.-.+.+.+++++ ..++++.|+.|.+.
T Consensus 43 ~gk~vvl~F~~--t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~ 87 (175)
T 1xvq_A 43 RGKSVLLNIFP--SVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPF 87 (175)
T ss_dssp TTSCEEEEECS--CCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHH
T ss_pred CCCEEEEEEEe--CCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHH
Confidence 78999999987 55 57888888888776 67999999998653
No 408
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=34.40 E-value=19 Score=34.44 Aligned_cols=44 Identities=20% Similarity=0.176 Sum_probs=30.6
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHH---HHHHHHHhCCceeEEEeccC
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTAL---MGAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~---l~~I~~~~~~~~E~v~Vgkd 546 (706)
.++||.|+|.|++++ .||+.+.+. ..++++..+..|-.+-|..+
T Consensus 36 ~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~d 83 (173)
T 3ira_A 36 RKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDRE 83 (173)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETT
T ss_pred HHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCc
Confidence 458999999999976 788887762 24555544446666666555
No 409
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=34.38 E-value=1.5e+02 Score=23.73 Aligned_cols=22 Identities=9% Similarity=0.010 Sum_probs=15.3
Q ss_pred HHHHhh-CCCCCcEEEEECCCCceec
Q 005245 431 YAKEKW-DFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 431 ~ike~~-~~~~iP~LVvL~pqGkv~~ 455 (706)
.+.+.+ ++.+.|.+++ +|+.+.
T Consensus 45 ~l~~~~~~~~~vP~l~~---~g~~i~ 67 (89)
T 2klx_A 45 EMVQRANGRNTFPQIFI---GDYHVG 67 (89)
T ss_dssp HHHHHHHSSCCSCEEEE---TTEECC
T ss_pred HHHHHhCCCCCcCEEEE---CCEEEe
Confidence 344556 7889999865 677664
No 410
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=34.03 E-value=48 Score=29.21 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=30.0
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkd 546 (706)
.||.+.+||.+++ ..|+.+.+.+.+++++. ..+.++.|..+
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~-~~v~~~~vd~~ 70 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKF-PETKFVKAIVN 70 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-SSEEEEEECCS
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHC-CCcEEEEEEhh
Confidence 5689999999943 34599999999998773 34556666554
No 411
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=33.59 E-value=43 Score=30.91 Aligned_cols=40 Identities=13% Similarity=-0.119 Sum_probs=30.6
Q ss_pred cCcEEEEEEecCCCChhHH--HHHHHHHHHHhhcccCCCCCeEEEEEec
Q 005245 345 RRKSVLLLVSDLDVSNEEL--FLLEQMYRESRQLSSRTESQYEVVWLPI 391 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~--~~L~~iY~elk~~~~~~~~~fEIVwIpi 391 (706)
.+|.++.+|++.+||.|.. +.|.++.++. +.++.+..+|+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~-------~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKAL-------PSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHS-------CTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHC-------CCceEEEEecc
Confidence 5788999999999999876 5676665554 23688888887
No 412
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=32.97 E-value=33 Score=31.02 Aligned_cols=46 Identities=11% Similarity=-0.062 Sum_probs=33.1
Q ss_pred ccccccCceEEEEEcc-CChhHH---HHHHHHHHHHHHHhCCceeEEEeccCCch
Q 005245 499 IPTWIMEQKHICLYGG-EDLEWV---RKFTALMGAVARAAGIALEMLYVGKSNPK 549 (706)
Q Consensus 499 I~~~i~egK~I~LYgg-~d~~Wi---r~FT~~l~~I~~~~~~~~E~v~Vgkdn~~ 549 (706)
++++ .||.+.|||. + .|| +.=.+.+.+++++. ..++++.|+.|.+.
T Consensus 38 l~~~--~gk~vvl~f~~~--~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~ 87 (165)
T 1q98_A 38 LNDF--ASKRKVLNIFPS--IDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPF 87 (165)
T ss_dssp GGGG--TTSEEEEEECSC--SCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHH
T ss_pred hHHh--CCCeEEEEEECC--CCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHH
Confidence 4454 7899999986 5 455 55456677776665 68999999998653
No 413
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=32.97 E-value=28 Score=33.20 Aligned_cols=48 Identities=10% Similarity=-0.007 Sum_probs=34.4
Q ss_pred CccccccCceEEEEEcc-CC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 498 VIPTWIMEQKHICLYGG-ED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 498 ~I~~~i~egK~I~LYgg-~d-~~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
.++++ .||.+.|+|. .. -..|+.=.+.+.+++++. ..++++.|+.|.+
T Consensus 72 ~L~d~--~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~ 121 (200)
T 3zrd_A 72 ALSSF--AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLP 121 (200)
T ss_dssp EGGGG--TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCH
T ss_pred cHHHh--CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCH
Confidence 34454 7999999986 41 233566677788887765 6799999999865
No 414
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=32.88 E-value=46 Score=28.21 Aligned_cols=19 Identities=21% Similarity=0.125 Sum_probs=15.4
Q ss_pred cCcEEEEEEecCCCChhHH
Q 005245 345 RRKSVLLLVSDLDVSNEEL 363 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~ 363 (706)
..+.+.++|++.||++|..
T Consensus 14 ~~~~~v~~f~~~~C~~C~~ 32 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDE 32 (100)
T ss_dssp CCCCEEEEEECSSCHHHHH
T ss_pred CCCCEEEEEeCCCCcchHH
Confidence 3556788899999999975
No 415
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=32.86 E-value=34 Score=30.04 Aligned_cols=41 Identities=7% Similarity=-0.001 Sum_probs=28.4
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn 547 (706)
.||.+.++|.+++ .+|+.+.+.+.++++.. .+.++.|.-+.
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~ 80 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDI 80 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccc
Confidence 5899999999943 44688888887775543 45556665553
No 416
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=32.84 E-value=2e+02 Score=23.42 Aligned_cols=49 Identities=22% Similarity=0.247 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhCCCCCcEEEEECCCCceecccHHHHHHHhCcccc---cCChhhHH
Q 005245 426 PAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAF---PFSVAREE 478 (706)
Q Consensus 426 ~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AF---PFT~~r~e 478 (706)
.+..+.|++......+|++++-+.... ..... ....|+.+| ||+.+...
T Consensus 61 ~~~~~~l~~~~~~~~~~ii~~s~~~~~---~~~~~-~~~~g~~~~l~KP~~~~~l~ 112 (124)
T 1mb3_A 61 LEVTKWLKEDDDLAHIPVVAVTAFAMK---GDEER-IREGGCEAYISKPISVVHFL 112 (124)
T ss_dssp HHHHHHHHHSTTTTTSCEEEEC---------CHHH-HHHHTCSEEECSSCCHHHHH
T ss_pred HHHHHHHHcCccccCCcEEEEECCCCH---HHHHH-HHhCCCCEEEeCCCCHHHHH
Confidence 356777777656778898887654332 22333 345788887 77765543
No 417
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=32.71 E-value=10 Score=35.00 Aligned_cols=45 Identities=2% Similarity=0.022 Sum_probs=31.4
Q ss_pred ccCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 005245 503 IMEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn 547 (706)
...||.+.|+|.+++ .+|+.+.+.+.++++..+..+.++.|.-+.
T Consensus 43 ~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~ 88 (164)
T 1sen_A 43 AASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLED 88 (164)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEG
T ss_pred HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecC
Confidence 458999999999954 556999988888755433345566666553
No 418
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=31.96 E-value=40 Score=32.53 Aligned_cols=49 Identities=12% Similarity=0.026 Sum_probs=35.9
Q ss_pred CceEEEEEcc-CChhHH---HHHHHHHHHHHHHh-CCceeEEEeccCCchhhhhhhh
Q 005245 505 EQKHICLYGG-EDLEWV---RKFTALMGAVARAA-GIALEMLYVGKSNPKEKARRII 556 (706)
Q Consensus 505 egK~I~LYgg-~d~~Wi---r~FT~~l~~I~~~~-~~~~E~v~Vgkdn~~e~v~~~~ 556 (706)
.||.+.|||. + .|| +.-.+.+.+++++. +..++++.|+.|.+ +.+++-.
T Consensus 55 ~Gk~vll~F~pa--~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~-~~~~~~~ 108 (220)
T 1zye_A 55 KGKYLVLFFYPL--DFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSH-FSHLAWI 108 (220)
T ss_dssp TTSEEEEEECSC--TTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCH-HHHHHHH
T ss_pred CCCeEEEEEECC--CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH-HHHHHHH
Confidence 6899999998 8 565 77777787776653 35799999999864 3444433
No 419
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=31.88 E-value=10 Score=33.06 Aligned_cols=46 Identities=7% Similarity=-0.016 Sum_probs=30.2
Q ss_pred ccCceEEEEEccCCh-h--------------HHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 503 IMEQKHICLYGGEDL-E--------------WVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 503 i~egK~I~LYgg~d~-~--------------Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
.+.||.+.++|.+++ . .|+.+.+.+.+++++.+..+.++.|.-|..
T Consensus 18 ~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~ 78 (123)
T 1oaz_A 18 LKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQN 78 (123)
T ss_dssp TSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSC
T ss_pred HhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCC
Confidence 358999999999964 5 677888888888766444677888777643
No 420
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=31.28 E-value=25 Score=27.47 Aligned_cols=40 Identities=13% Similarity=0.019 Sum_probs=28.4
Q ss_pred EEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCCc
Q 005245 509 ICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSNP 548 (706)
Q Consensus 509 I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~ 548 (706)
..++|++++ .+|+++.+.+.+++++.+..++++.|.-+..
T Consensus 5 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~ 45 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMEN 45 (85)
T ss_dssp EEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSS
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCC
Confidence 456666632 4459999999999887666788888877643
No 421
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=31.12 E-value=16 Score=31.63 Aligned_cols=23 Identities=17% Similarity=0.697 Sum_probs=18.5
Q ss_pred CCCceeecCCCCccccee-----eeecc
Q 005245 681 RIPEKVVCAECGRRMEEF-----IMYRC 703 (706)
Q Consensus 681 ~ip~~i~CpeC~R~ME~~-----i~YkC 703 (706)
+++...-||+||+++|+- +.|-|
T Consensus 27 ~~~~~afCPeCgq~Le~lkACGA~~yFC 54 (81)
T 2jrp_A 27 DFSLQALCPDCRQPLQVLKACGAVDYFC 54 (81)
T ss_dssp EEEEEEECSSSCSCCCEEEETTEEEECC
T ss_pred cCCCcccCcchhhHHHHHHhcCCcCeee
Confidence 466677999999999995 66665
No 422
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=31.04 E-value=40 Score=29.84 Aligned_cols=22 Identities=14% Similarity=-0.029 Sum_probs=16.3
Q ss_pred EEEEEEecCCCChhHH--HHHHHH
Q 005245 348 SVLLLVSDLDVSNEEL--FLLEQM 369 (706)
Q Consensus 348 ~VlL~fSal~~~~~e~--~~L~~i 369 (706)
.++.+|++.||++|+. +.|.++
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l 53 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVL 53 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHH
Confidence 4578899999999986 345444
No 423
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=31.02 E-value=1.1e+02 Score=25.83 Aligned_cols=64 Identities=17% Similarity=0.179 Sum_probs=38.3
Q ss_pred EEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEecccCCCCcChhhHHHHHHhhcCCCceeeccCCCCCHHHH
Q 005245 350 LLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPIVDRSTPWTEAKEHKFEALQYMMPWFSVHHPSAIDPAVI 429 (706)
Q Consensus 350 lL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpiVd~s~~w~D~de~~Fe~~~~~MPWyAVpf~~~id~~~~ 429 (706)
..+||+.|||.|..- ..+.+++ +..|+++=| |.+. ++ +.+..
T Consensus 21 v~vy~~~~Cp~C~~~--~~~L~~~-------~i~~~~~di----------~~~~-----------------~~--~~~~~ 62 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEV--KTLFKRL-------GVQPLVVEL----------DQLG-----------------PQ--GPQLQ 62 (113)
T ss_dssp EEEEECTTCHHHHHH--HHHHHHT-------TCCCEEEEG----------GGST-----------------TH--HHHHH
T ss_pred EEEEECCCChhHHHH--HHHHHHc-------CCCCeEEEe----------ecCC-----------------CC--hHHHH
Confidence 456899999999852 3333333 345776554 2110 00 12345
Q ss_pred HHHHHhhCCCCCcEEEEECCCCcee
Q 005245 430 RYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 430 r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
..+++..+.+..|.+.+ +|+.+
T Consensus 63 ~~l~~~~g~~tvP~ifi---~g~~i 84 (113)
T 3rhb_A 63 KVLERLTGQHTVPNVFV---CGKHI 84 (113)
T ss_dssp HHHHHHHSCCSSCEEEE---TTEEE
T ss_pred HHHHHHhCCCCcCEEEE---CCEEE
Confidence 56666778888999865 67665
No 424
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=29.79 E-value=40 Score=28.65 Aligned_cols=43 Identities=12% Similarity=0.035 Sum_probs=31.1
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHH---HHHHHHhCCceeEEEeccC
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALM---GAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l---~~I~~~~~~~~E~v~Vgkd 546 (706)
..||.+.|+|.+.+ .+|+.+.+.+ .++++..+..+..+.|..+
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 71 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDME 71 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSS
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecC
Confidence 37899999999953 5568888887 6666554556677777665
No 425
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=29.19 E-value=49 Score=29.64 Aligned_cols=16 Identities=25% Similarity=0.758 Sum_probs=12.8
Q ss_pred CCCceeecCCCCcccc
Q 005245 681 RIPEKVVCAECGRRME 696 (706)
Q Consensus 681 ~ip~~i~CpeC~R~ME 696 (706)
.--....||+|+|.+-
T Consensus 66 ~~s~~~~C~nC~R~va 81 (99)
T 3mhs_C 66 ESSQYIHCENCGRDVS 81 (99)
T ss_dssp TTSCEEECTTTCCEEE
T ss_pred cCCCeEECCCCCCCch
Confidence 3556889999999874
No 426
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=28.64 E-value=9.5 Score=39.74 Aligned_cols=36 Identities=6% Similarity=-0.052 Sum_probs=26.1
Q ss_pred ceeecceecCcEEEEEEecCCCChhHHHHHHHHHHHHh
Q 005245 337 RKVSIDVLRRKSVLLLVSDLDVSNEELFLLEQMYRESR 374 (706)
Q Consensus 337 ~kV~Is~L~gK~VlL~fSal~~~~~e~~~L~~iY~elk 374 (706)
.+..+...-++.....|.+.||++|.. +..+++++.
T Consensus 188 ~~~~la~~l~~~~vV~F~A~WC~~Ck~--l~p~le~lA 223 (291)
T 3kp9_A 188 LAVGLAAHLRQIGGTMYGAYWCPHCQD--QKELFGAAF 223 (291)
T ss_dssp THHHHHHHHHHTTCEEEECTTCHHHHH--HHHHHGGGG
T ss_pred HHHHHHHHhCCCCEEEEECCCCHHHHH--HHHHHHHHH
Confidence 455555545555678999999999975 667777775
No 427
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=27.83 E-value=26 Score=31.49 Aligned_cols=23 Identities=26% Similarity=0.716 Sum_probs=15.5
Q ss_pred CCCceeecCCCCccccee-----eeecc
Q 005245 681 RIPEKVVCAECGRRMEEF-----IMYRC 703 (706)
Q Consensus 681 ~ip~~i~CpeC~R~ME~~-----i~YkC 703 (706)
++....-||+|+.++|+. +.|-|
T Consensus 57 ~f~~~a~CPdC~q~LevLkACGAvdYFC 84 (101)
T 2jne_A 57 FIEMKALCPDCHQPLQVLKACGAVDYFC 84 (101)
T ss_dssp EEEEEEECTTTCSBCEEEEETTEEEEEE
T ss_pred hhhccccCcchhhHHHHHHHhcCcchhh
Confidence 455566777777777774 66665
No 428
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=27.61 E-value=41 Score=28.51 Aligned_cols=25 Identities=28% Similarity=0.323 Sum_probs=17.8
Q ss_pred HHHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 428 VIRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 428 ~~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
..+.+++.++..+.|.+++ +|+.+-
T Consensus 60 ~~~~l~~~~g~~~vP~v~i---~g~~ig 84 (105)
T 2yan_A 60 VRQGLKAYSNWPTYPQLYV---KGELVG 84 (105)
T ss_dssp HHHHHHHHHTCCSSCEEEE---TTEEEE
T ss_pred HHHHHHHHHCCCCCCeEEE---CCEEEe
Confidence 4556667778899999865 577653
No 429
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=27.00 E-value=92 Score=29.27 Aligned_cols=42 Identities=7% Similarity=-0.069 Sum_probs=31.7
Q ss_pred cCcEEEEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEEec
Q 005245 345 RRKSVLLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWLPI 391 (706)
Q Consensus 345 ~gK~VlL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwIpi 391 (706)
.+|.+.+.|++.|||.|... ...++++.+. ..+++.+..+|+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~--~~~l~~~~~~---~~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHL--EPVLSKHAKS---FKDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHH--HHHHHHHHTT---CCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHH--HHHHHHHHHH---CCCCeEEEEecC
Confidence 47999999999999999874 3555666542 334688888887
No 430
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=26.65 E-value=65 Score=30.98 Aligned_cols=43 Identities=19% Similarity=0.220 Sum_probs=34.7
Q ss_pred CceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccCC
Q 005245 505 EQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKSN 547 (706)
Q Consensus 505 egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn 547 (706)
.+|-|.+-|++++ ..|+...+.+.+++++.+....++.|--|.
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe 83 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE 83 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC
Confidence 6789999999932 335999999999998876667888887773
No 431
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=26.60 E-value=32 Score=33.01 Aligned_cols=56 Identities=23% Similarity=0.332 Sum_probs=32.7
Q ss_pred ccchhhHHHHHhhhcccCCCCCCCcHHHHHHHhhhhcCCCCCccceecCCCCCCCCceeecCCCCcccceeeee
Q 005245 628 KAKDETILKCLTEYTTWEPNVPEKSFVVAMNDYLNENRTPYHCNRLILPGEAGRIPEKVVCAECGRRMEEFIMY 701 (706)
Q Consensus 628 ~g~G~~~l~tl~ef~~Wk~~v~~kGF~~Af~ey~~~~~~~~~C~~~~~p~~~g~ip~~i~CpeC~R~ME~~i~Y 701 (706)
..|++...+.|...+..++. ++ ..+|. =.-|.+.-. |..|+ +||-||.+-+.|..+
T Consensus 114 ~~H~~~~~~~l~~l~~~~~~--~~------~~~~~----C~~CG~i~~----~~~p~--~CP~Cg~~~~~F~~~ 169 (170)
T 3pwf_A 114 KIHAELYRKAKEKAEKGEDI--EI------KKVYI----CPICGYTAV----DEAPE--YCPVCGAPKEKFVVF 169 (170)
T ss_dssp HHHHHHHHHHHHHHTTTCCC--CC------SCEEE----CTTTCCEEE----SCCCS--BCTTTCCBGGGCEEE
T ss_pred HHHHHHHHHHHHHHhcCCcC--CC------CCeeE----eCCCCCeeC----CCCCC--CCCCCCCCHHHceec
Confidence 45676666666666654431 00 00110 223665332 56888 999999999988654
No 432
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=26.09 E-value=50 Score=33.63 Aligned_cols=43 Identities=7% Similarity=-0.065 Sum_probs=34.4
Q ss_pred cCceEEEEEccCCh-hHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 005245 504 MEQKHICLYGGEDL-EWVRKFTALMGAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 504 ~egK~I~LYgg~d~-~Wir~FT~~l~~I~~~~~~~~E~v~Vgkd 546 (706)
..||.+.++|.+++ ..|+++.+.+.++++..+..+.++.|.-|
T Consensus 33 ~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d 76 (298)
T 3ed3_A 33 NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCD 76 (298)
T ss_dssp SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT
T ss_pred hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEcc
Confidence 36889999999932 33599999999998886666888888776
No 433
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=25.85 E-value=71 Score=29.07 Aligned_cols=46 Identities=17% Similarity=0.437 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHHHHHHH-hCCceeEEEeccCCchhh----hhhhhhhhccccccCCC
Q 005245 517 LEWVRKFTALMGAVARA-AGIALEMLYVGKSNPKEK----ARRIISTISVEKLSHTL 568 (706)
Q Consensus 517 ~~Wir~FT~~l~~I~~~-~~~~~E~v~Vgkdn~~e~----v~~~~~~i~~e~ls~~~ 568 (706)
++|.+. +++++ .+.+|++.||.-.++.+. -|+.++.|..|.+=|.+
T Consensus 32 yEWLqA------al~RKyp~~~f~~~YIDI~~~~~~l~d~~~~~ae~I~ede~FYPl 82 (111)
T 1xg8_A 32 YDWLQP------LLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPL 82 (111)
T ss_dssp HHHHHH------HHHHHCTTSCEEEEEEETTTC---CCHHHHHHHHHHHTTSSCSSE
T ss_pred HHHHHH------HHhCcCCCCceEEEEEeccCCccchhHHHHHHHHHHhhccccceE
Confidence 466642 44454 478999999998776444 67888889888886644
No 434
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=25.44 E-value=39 Score=31.42 Aligned_cols=48 Identities=17% Similarity=0.146 Sum_probs=37.0
Q ss_pred ccccCc-eEEEEEccCChhHH-----HHHHHHHHHHHHHhCCceeEEEeccCCchh
Q 005245 501 TWIMEQ-KHICLYGGEDLEWV-----RKFTALMGAVARAAGIALEMLYVGKSNPKE 550 (706)
Q Consensus 501 ~~i~eg-K~I~LYgg~d~~Wi-----r~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e 550 (706)
++|..+ +.+.++|.++ || +...+.+.+++++.+..+.++-|.-|...+
T Consensus 27 ~~v~~~~~~vlVdF~A~--wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~ 80 (137)
T 2qsi_A 27 DFIAHSGKIVVLFFRGD--AVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERG 80 (137)
T ss_dssp HHHHTSSSEEEEEECCC--TTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHH
T ss_pred HHHhcCCCcEEEEEeCC--ccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHH
Confidence 344444 4999999994 76 569999999998877789999998885443
No 435
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=25.40 E-value=75 Score=28.68 Aligned_cols=49 Identities=10% Similarity=0.055 Sum_probs=32.8
Q ss_pred CceEEEEEcc-C-ChhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhh
Q 005245 505 EQKHICLYGG-E-DLEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRI 555 (706)
Q Consensus 505 egK~I~LYgg-~-d~~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~v~~~ 555 (706)
.||.+.|+|- + .-..|+.-.+.+.+++++. ..++++.|+.|.+ +.+++-
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~-~~~~~~ 96 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLP-FAQKRF 96 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH-HHHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCH-HHHHHH
Confidence 6898888883 5 2233565566666666555 6899999999865 344443
No 436
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=24.88 E-value=83 Score=28.20 Aligned_cols=52 Identities=13% Similarity=-0.001 Sum_probs=34.0
Q ss_pred ccccccCceEEEEEcc-CC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhh
Q 005245 499 IPTWIMEQKHICLYGG-ED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARR 554 (706)
Q Consensus 499 I~~~i~egK~I~LYgg-~d-~~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~v~~ 554 (706)
++++ .||.+.|||. .. -.-|+.-.+.+.+++++. ..++++.|+.|.+ +.+++
T Consensus 37 l~~~--~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~-~~~~~ 90 (163)
T 1psq_A 37 LADF--DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLP-FAQKR 90 (163)
T ss_dssp GGGG--TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH-HHHHH
T ss_pred HHHh--CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCH-HHHHH
Confidence 3444 7999999996 32 233555556666665554 6899999999864 33443
No 437
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=24.67 E-value=57 Score=27.51 Aligned_cols=31 Identities=3% Similarity=0.084 Sum_probs=19.0
Q ss_pred EEEEecCCCChhHHHHHHHHHHHHhhcccCCCCCeEEEEE
Q 005245 350 LLLVSDLDVSNEELFLLEQMYRESRQLSSRTESQYEVVWL 389 (706)
Q Consensus 350 lL~fSal~~~~~e~~~L~~iY~elk~~~~~~~~~fEIVwI 389 (706)
..+|++.|||.|..-+ .+.+++ +..||.+=|
T Consensus 24 v~ly~~~~Cp~C~~ak--~~L~~~-------~i~y~~vdI 54 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTK--KLLTDL-------GVDFDYVYV 54 (103)
T ss_dssp EEEEECSSCHHHHHHH--HHHHHH-------TBCEEEEEG
T ss_pred EEEEcCCCCchHHHHH--HHHHHc-------CCCcEEEEe
Confidence 4458999999988642 233333 234776554
No 438
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=24.54 E-value=54 Score=26.54 Aligned_cols=23 Identities=17% Similarity=0.134 Sum_probs=16.5
Q ss_pred HHHHHHhhCCCCCcEEEEECCCCcee
Q 005245 429 IRYAKEKWDFRKKPILVVLDPQGRVV 454 (706)
Q Consensus 429 ~r~ike~~~~~~iP~LVvL~pqGkv~ 454 (706)
...+.+.+.+..+|.+++ +|+++
T Consensus 56 ~~~l~~~~g~~~vP~l~~---~g~~i 78 (92)
T 3ic4_A 56 IEKVHSISGSYSVPVVVK---GDKHV 78 (92)
T ss_dssp HHHHHHHHSSSCSCEEEE---TTEEE
T ss_pred HHHHHHhcCCCCcCEEEE---CCEEE
Confidence 445566678889999988 66544
No 439
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=22.83 E-value=56 Score=26.43 Aligned_cols=24 Identities=13% Similarity=0.044 Sum_probs=15.4
Q ss_pred HHHHHHhhCCCCCcEEEEECCCCceec
Q 005245 429 IRYAKEKWDFRKKPILVVLDPQGRVVN 455 (706)
Q Consensus 429 ~r~ike~~~~~~iP~LVvL~pqGkv~~ 455 (706)
...+.+.+++.+.|.+++ +|+.+.
T Consensus 45 ~~~l~~~~~~~~vP~l~~---~g~~i~ 68 (92)
T 2khp_A 45 RAEMQERSGRNTFPQIFI---GSVHVG 68 (92)
T ss_dssp HHHHHHHHTSSCCCEEEE---TTEEEE
T ss_pred HHHHHHHhCCCCcCEEEE---CCEEEc
Confidence 444556678889997643 566554
No 440
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=22.82 E-value=36 Score=29.48 Aligned_cols=27 Identities=4% Similarity=-0.052 Sum_probs=24.5
Q ss_pred CCCCCceeecCCCCcccceeeeeccc-C
Q 005245 679 AGRIPEKVVCAECGRRMEEFIMYRCC-T 705 (706)
Q Consensus 679 ~g~ip~~i~CpeC~R~ME~~i~YkCC-h 705 (706)
.+.+|+...||=|+.+|+--|.-.|+ |
T Consensus 16 ~~~~p~~~~CpI~~~~m~dPV~~~cG~h 43 (98)
T 1wgm_A 16 YADACDEFLDPIMSTLMCDPVVLPSSRV 43 (98)
T ss_dssp CCSCCTTTBCTTTCSBCSSEEECTTTCC
T ss_pred hhcCcHhcCCcCccccccCCeECCCCCe
Confidence 56789999999999999999988888 7
No 441
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=22.36 E-value=3.3e+02 Score=24.97 Aligned_cols=42 Identities=12% Similarity=-0.100 Sum_probs=30.8
Q ss_pred CceEEEEEccCC-hhHHHHHHHHHHHHHHHhCCceeEEEeccC
Q 005245 505 EQKHICLYGGED-LEWVRKFTALMGAVARAAGIALEMLYVGKS 546 (706)
Q Consensus 505 egK~I~LYgg~d-~~Wir~FT~~l~~I~~~~~~~~E~v~Vgkd 546 (706)
.||.+.+.|.+- =.+|+.|.+.+.++.++.+..++++++.-+
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 577777766663 366799999999998775556777777665
No 442
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=22.33 E-value=75 Score=28.62 Aligned_cols=52 Identities=12% Similarity=-0.019 Sum_probs=32.8
Q ss_pred ccccccCceEEEEEcc-CC-hhHHHHHHHHHHHHHHHhCCceeEEEeccCCchhhhhhh
Q 005245 499 IPTWIMEQKHICLYGG-ED-LEWVRKFTALMGAVARAAGIALEMLYVGKSNPKEKARRI 555 (706)
Q Consensus 499 I~~~i~egK~I~LYgg-~d-~~Wir~FT~~l~~I~~~~~~~~E~v~Vgkdn~~e~v~~~ 555 (706)
++++ .||.+.|+|. +. -..|+.=.+.+.+++++ ..++++.|+.|.+. .+++.
T Consensus 41 l~~~--~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~-~~~~~ 94 (166)
T 3p7x_A 41 LADY--AGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPF-AQKRW 94 (166)
T ss_dssp GGGG--TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHH-HHHHH
T ss_pred HHHh--CCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHH-HHHHH
Confidence 3444 7898888886 41 23455545555655444 67999999998653 34443
No 443
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=21.94 E-value=3.3e+02 Score=22.32 Aligned_cols=50 Identities=8% Similarity=0.131 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhCCCCCcEEEEECCCCceecccHHHHHHHhCcccc---cCChhhHHH
Q 005245 426 PAVIRYAKEKWDFRKKPILVVLDPQGRVVNQNALHMMWIWGSVAF---PFSVAREEA 479 (706)
Q Consensus 426 ~~~~r~ike~~~~~~iP~LVvL~pqGkv~~~nA~~mI~~wG~~AF---PFT~~r~ee 479 (706)
.+..+.|++.....+.|++++.+.... +...-....|+++| ||+.++..+
T Consensus 71 ~~~~~~l~~~~~~~~~pii~ls~~~~~----~~~~~~~~~g~~~~l~kP~~~~~l~~ 123 (140)
T 1k68_A 71 REVLAEIKSDPTLKRIPVVVLSTSINE----DDIFHSYDLHVNCYITKSANLSQLFQ 123 (140)
T ss_dssp HHHHHHHHHSTTGGGSCEEEEESCCCH----HHHHHHHHTTCSEEEECCSSHHHHHH
T ss_pred HHHHHHHHcCcccccccEEEEecCCcH----HHHHHHHHhchhheecCCCCHHHHHH
Confidence 356777777666678999988876542 22223446788887 777665543
Done!