Query 005246
Match_columns 706
No_of_seqs 366 out of 1509
Neff 5.6
Searched_HMMs 46136
Date Thu Mar 28 20:25:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005246.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005246hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 1E-101 3E-106 890.7 28.1 611 6-698 16-661 (975)
2 PF03859 CG-1: CG-1 domain; I 100.0 2.7E-62 5.9E-67 444.5 10.1 117 19-136 2-118 (118)
3 cd01175 IPT_COE IPT domain of 99.6 2.1E-15 4.6E-20 129.7 9.1 80 440-526 2-83 (85)
4 KOG4412 26S proteasome regulat 99.4 3.8E-12 8.2E-17 124.9 10.8 78 627-705 121-198 (226)
5 PF01833 TIG: IPT/TIG domain; 99.2 5.2E-11 1.1E-15 102.0 9.4 84 439-526 1-85 (85)
6 PF12796 Ank_2: Ankyrin repeat 99.2 9.5E-11 2.1E-15 101.6 10.2 73 627-704 12-84 (89)
7 PF13857 Ank_5: Ankyrin repeat 99.2 1.7E-11 3.7E-16 99.1 4.7 55 631-685 1-56 (56)
8 PF13637 Ank_4: Ankyrin repeat 99.2 6.1E-11 1.3E-15 94.6 6.7 54 645-699 1-54 (54)
9 KOG4412 26S proteasome regulat 99.1 1.6E-10 3.5E-15 113.6 6.9 77 627-704 87-164 (226)
10 cd01179 IPT_plexin_repeat2 Sec 99.1 1.1E-09 2.4E-14 96.0 10.4 84 439-528 1-85 (85)
11 KOG0515 p53-interacting protei 99.1 3E-10 6.5E-15 125.4 8.0 94 610-706 550-643 (752)
12 cd00102 IPT Immunoglobulin-lik 99.0 1.4E-09 3E-14 94.4 9.7 83 440-527 2-88 (89)
13 PHA02736 Viral ankyrin protein 99.0 1.2E-09 2.5E-14 104.7 9.9 75 628-703 74-150 (154)
14 PHA02795 ankyrin-like protein; 99.0 8.9E-10 1.9E-14 122.9 10.3 79 626-705 202-288 (437)
15 KOG0512 Fetal globin-inducing 99.0 9.1E-10 2E-14 107.7 8.8 94 609-705 62-156 (228)
16 KOG0508 Ankyrin repeat protein 99.0 2.8E-10 6.1E-15 124.6 5.9 88 615-705 122-209 (615)
17 PHA02743 Viral ankyrin protein 99.0 1.4E-09 3.1E-14 106.2 10.1 77 628-705 76-154 (166)
18 PHA02946 ankyin-like protein; 99.0 1.2E-09 2.6E-14 123.0 10.1 80 625-705 52-133 (446)
19 PHA02743 Viral ankyrin protein 99.0 1.4E-09 3E-14 106.3 9.2 77 627-704 39-120 (166)
20 PHA02875 ankyrin repeat protei 98.9 2.9E-09 6.3E-14 117.3 10.2 76 627-703 117-192 (413)
21 PHA02791 ankyrin-like protein; 98.9 3.4E-09 7.4E-14 112.8 9.9 73 627-700 76-149 (284)
22 KOG0509 Ankyrin repeat and DHH 98.9 2.2E-09 4.7E-14 121.7 8.4 89 615-705 116-204 (600)
23 PHA03095 ankyrin-like protein; 98.9 4E-09 8.7E-14 117.6 10.3 77 626-703 238-314 (471)
24 PHA02884 ankyrin repeat protei 98.9 5.1E-09 1.1E-13 112.2 10.1 77 627-704 48-129 (300)
25 PLN03192 Voltage-dependent pot 98.9 3.4E-09 7.3E-14 127.6 9.7 88 612-702 527-614 (823)
26 PHA02741 hypothetical protein; 98.9 5.9E-09 1.3E-13 101.9 9.7 76 626-702 78-155 (169)
27 KOG4214 Myotrophin and similar 98.9 2.4E-09 5.3E-14 95.3 6.2 72 630-703 20-91 (117)
28 KOG0509 Ankyrin repeat and DHH 98.9 3.1E-09 6.8E-14 120.4 8.8 82 618-701 86-168 (600)
29 PHA02791 ankyrin-like protein; 98.9 5.3E-09 1.2E-13 111.3 9.9 77 626-705 44-120 (284)
30 PHA02859 ankyrin repeat protei 98.9 6.7E-09 1.4E-13 105.3 10.0 79 626-705 104-185 (209)
31 PHA02741 hypothetical protein; 98.9 6.4E-09 1.4E-13 101.7 9.3 69 634-703 49-123 (169)
32 PHA02878 ankyrin repeat protei 98.9 6.2E-09 1.4E-13 117.4 10.0 92 612-705 169-261 (477)
33 KOG0514 Ankyrin repeat protein 98.9 3.4E-09 7.3E-14 113.4 7.3 71 627-699 322-393 (452)
34 PHA02859 ankyrin repeat protei 98.9 1.1E-08 2.3E-13 103.9 10.2 80 625-705 66-151 (209)
35 PTZ00322 6-phosphofructo-2-kin 98.8 9.8E-09 2.1E-13 121.0 10.9 85 614-701 86-170 (664)
36 PHA02730 ankyrin-like protein; 98.8 9.1E-09 2E-13 120.0 9.6 77 625-702 20-102 (672)
37 PHA02874 ankyrin repeat protei 98.8 1.3E-08 2.8E-13 113.3 10.2 89 614-704 127-215 (434)
38 PHA02878 ankyrin repeat protei 98.8 1.2E-08 2.7E-13 114.9 10.1 77 626-705 215-293 (477)
39 PHA03100 ankyrin repeat protei 98.8 1.2E-08 2.6E-13 114.3 9.8 79 625-704 230-308 (480)
40 PHA02874 ankyrin repeat protei 98.8 1.4E-08 2.9E-13 113.2 10.2 77 627-704 106-182 (434)
41 KOG4177 Ankyrin [Cell wall/mem 98.8 8.4E-09 1.8E-13 124.9 8.8 78 627-705 522-599 (1143)
42 PHA02798 ankyrin-like protein; 98.8 1.3E-08 2.7E-13 115.4 9.6 79 625-704 89-173 (489)
43 PHA03095 ankyrin-like protein; 98.8 1.4E-08 3.1E-13 113.3 9.9 93 612-705 48-145 (471)
44 PHA02989 ankyrin repeat protei 98.8 1.4E-08 3E-13 115.3 9.5 70 632-702 243-312 (494)
45 cd00603 IPT_PCSR IPT domain of 98.7 5.8E-08 1.3E-12 85.2 9.9 85 439-527 1-89 (90)
46 PHA02798 ankyrin-like protein; 98.7 3.2E-08 7E-13 112.1 10.4 71 632-703 245-315 (489)
47 KOG0195 Integrin-linked kinase 98.7 1.4E-08 3.1E-13 105.9 6.6 89 614-704 37-125 (448)
48 PHA03100 ankyrin repeat protei 98.7 3.9E-08 8.5E-13 110.1 9.7 79 625-704 121-201 (480)
49 PHA02875 ankyrin repeat protei 98.7 7.4E-08 1.6E-12 106.2 11.2 75 628-703 51-126 (413)
50 smart00429 IPT ig-like, plexin 98.7 6.5E-08 1.4E-12 84.8 8.6 84 439-527 2-90 (90)
51 PLN03192 Voltage-dependent pot 98.7 6.1E-08 1.3E-12 116.8 10.5 91 613-705 560-681 (823)
52 PHA02946 ankyin-like protein; 98.7 6.7E-08 1.5E-12 108.9 10.1 76 626-703 189-267 (446)
53 cd01180 IPT_plexin_repeat1 Fir 98.7 9.6E-08 2.1E-12 85.5 9.0 87 440-528 2-94 (94)
54 PHA02989 ankyrin repeat protei 98.7 6.5E-08 1.4E-12 109.8 9.8 76 627-703 90-171 (494)
55 COG0666 Arp FOG: Ankyrin repea 98.6 1E-07 2.2E-12 92.5 9.4 74 629-703 90-171 (235)
56 PHA02876 ankyrin repeat protei 98.6 7.6E-08 1.6E-12 113.4 10.1 77 626-703 159-235 (682)
57 PHA02716 CPXV016; CPX019; EVM0 98.6 8.7E-08 1.9E-12 113.6 9.4 67 628-694 195-266 (764)
58 PHA02716 CPXV016; CPX019; EVM0 98.6 6.5E-08 1.4E-12 114.7 8.0 70 634-704 486-565 (764)
59 KOG4177 Ankyrin [Cell wall/mem 98.6 7.6E-08 1.6E-12 116.8 7.6 75 626-701 554-628 (1143)
60 KOG0502 Integral membrane anky 98.6 3.8E-08 8.2E-13 99.6 4.2 77 627-704 175-251 (296)
61 PHA02730 ankyrin-like protein; 98.6 1.6E-07 3.5E-12 109.7 9.1 77 627-704 444-523 (672)
62 KOG0510 Ankyrin repeat protein 98.6 9.2E-08 2E-12 110.9 6.9 74 629-703 290-365 (929)
63 PHA02884 ankyrin repeat protei 98.5 2E-07 4.4E-12 100.0 9.1 68 627-694 85-153 (300)
64 PHA02736 Viral ankyrin protein 98.5 1.1E-07 2.4E-12 91.0 6.0 61 639-700 49-113 (154)
65 KOG1710 MYND Zn-finger and ank 98.5 2.2E-07 4.8E-12 97.2 8.5 93 609-704 11-104 (396)
66 KOG0505 Myosin phosphatase, re 98.5 1.4E-07 3.1E-12 105.3 7.5 72 633-705 186-257 (527)
67 KOG0505 Myosin phosphatase, re 98.5 1E-07 2.2E-12 106.5 5.9 91 613-706 43-133 (527)
68 PHA02917 ankyrin-like protein; 98.5 2.9E-07 6.3E-12 108.5 10.0 78 626-704 433-511 (661)
69 KOG0514 Ankyrin repeat protein 98.5 1.7E-07 3.6E-12 100.7 7.0 72 626-698 354-426 (452)
70 KOG0512 Fetal globin-inducing 98.5 1.9E-07 4E-12 91.8 6.3 76 626-701 111-186 (228)
71 PHA02876 ankyrin repeat protei 98.5 4.3E-07 9.3E-12 107.1 10.6 79 626-705 389-469 (682)
72 KOG0508 Ankyrin repeat protein 98.5 1.3E-07 2.9E-12 104.1 5.4 80 625-705 97-176 (615)
73 KOG0510 Ankyrin repeat protein 98.4 3.3E-07 7.2E-12 106.4 7.8 77 628-705 322-403 (929)
74 PHA02917 ankyrin-like protein; 98.4 5.7E-07 1.2E-11 106.1 9.3 74 628-701 15-94 (661)
75 cd02849 CGTase_C_term Cgtase ( 98.4 1.8E-06 3.8E-11 75.6 9.4 79 439-526 3-81 (81)
76 KOG0705 GTPase-activating prot 98.4 1.1E-06 2.5E-11 98.6 10.1 94 607-703 621-718 (749)
77 cd01181 IPT_plexin_repeat3 Thi 98.4 1.4E-06 3E-11 79.0 8.4 73 439-514 1-81 (99)
78 PHA02795 ankyrin-like protein; 98.4 8.9E-07 1.9E-11 99.2 8.6 79 626-705 163-247 (437)
79 PHA02792 ankyrin-like protein; 98.4 9.3E-07 2E-11 102.7 8.5 75 628-703 355-434 (631)
80 COG0666 Arp FOG: Ankyrin repea 98.3 1E-06 2.2E-11 85.6 7.5 75 626-701 125-202 (235)
81 KOG0195 Integrin-linked kinase 98.3 6E-07 1.3E-11 93.9 6.2 66 635-700 24-89 (448)
82 PHA02792 ankyrin-like protein; 98.3 1.1E-06 2.3E-11 102.2 8.0 76 627-703 392-477 (631)
83 KOG0502 Integral membrane anky 98.3 1E-06 2.2E-11 89.4 6.6 71 634-705 149-219 (296)
84 cd00204 ANK ankyrin repeats; 98.3 4.3E-06 9.3E-11 73.9 10.0 72 628-700 23-94 (126)
85 TIGR00870 trp transient-recept 98.2 4.4E-06 9.6E-11 99.7 11.1 97 608-705 79-201 (743)
86 KOG0522 Ankyrin repeat protein 98.2 3.7E-06 8E-11 94.2 8.3 68 634-701 44-111 (560)
87 PF13857 Ank_5: Ankyrin repeat 98.1 1.9E-06 4E-11 69.7 3.6 40 664-704 1-41 (56)
88 PF12796 Ank_2: Ankyrin repeat 98.1 8.3E-06 1.8E-10 70.5 7.3 52 649-705 1-52 (89)
89 cd00604 IPT_CGTD IPT domain (d 98.1 2.1E-05 4.5E-10 68.9 9.6 79 440-527 2-80 (81)
90 cd00204 ANK ankyrin repeats; 98.1 1.7E-05 3.7E-10 70.1 8.7 72 626-698 54-125 (126)
91 KOG0506 Glutaminase (contains 98.0 3.2E-06 7E-11 93.3 4.3 74 628-702 522-596 (622)
92 TIGR00870 trp transient-recept 98.0 2.6E-05 5.6E-10 93.2 11.4 29 676-705 126-154 (743)
93 PF00023 Ank: Ankyrin repeat H 98.0 8.4E-06 1.8E-10 58.8 4.4 33 644-676 1-33 (33)
94 KOG0818 GTPase-activating prot 98.0 2.2E-05 4.7E-10 87.2 9.2 69 630-698 151-220 (669)
95 KOG0783 Uncharacterized conser 98.0 3.9E-06 8.4E-11 97.4 3.2 65 638-703 45-110 (1267)
96 KOG1710 MYND Zn-finger and ank 98.0 2.1E-05 4.5E-10 82.7 8.0 88 609-699 44-132 (396)
97 PF13606 Ank_3: Ankyrin repeat 97.9 1.3E-05 2.8E-10 57.1 3.9 29 644-672 1-29 (30)
98 KOG0507 CASK-interacting adapt 97.8 1.4E-05 3E-10 92.6 4.0 74 627-701 97-170 (854)
99 PF13606 Ank_3: Ankyrin repeat 97.7 3.9E-05 8.5E-10 54.6 3.8 28 677-705 1-28 (30)
100 PTZ00322 6-phosphofructo-2-kin 97.7 6.4E-05 1.4E-09 89.1 7.5 56 648-704 85-140 (664)
101 KOG0507 CASK-interacting adapt 97.6 7.4E-05 1.6E-09 86.9 6.6 88 613-703 52-139 (854)
102 PF00023 Ank: Ankyrin repeat H 97.6 8.6E-05 1.9E-09 53.5 3.7 28 677-705 1-28 (33)
103 PF13637 Ank_4: Ankyrin repeat 97.5 0.00012 2.7E-09 58.2 4.6 40 626-665 15-54 (54)
104 KOG2384 Major histocompatibili 97.5 0.0002 4.2E-09 71.8 6.3 66 635-701 2-68 (223)
105 KOG3676 Ca2+-permeable cation 97.5 0.00026 5.5E-09 83.2 8.1 58 645-703 240-297 (782)
106 KOG3676 Ca2+-permeable cation 97.4 0.00029 6.2E-09 82.8 7.7 76 625-700 253-330 (782)
107 KOG4214 Myotrophin and similar 97.4 0.00035 7.6E-09 62.9 6.0 59 626-684 48-106 (117)
108 KOG4369 RTK signaling protein 97.2 0.00019 4.1E-09 85.9 2.6 79 624-703 769-848 (2131)
109 KOG0511 Ankyrin repeat protein 97.1 0.00074 1.6E-08 73.5 6.1 57 646-703 37-93 (516)
110 KOG0515 p53-interacting protei 97.0 0.00086 1.9E-08 75.5 5.3 74 625-699 596-672 (752)
111 cd00602 IPT_TF IPT domain of e 96.8 0.0061 1.3E-07 55.8 8.2 82 440-527 2-100 (101)
112 KOG0782 Predicted diacylglycer 96.6 0.0037 8.1E-08 70.8 6.5 92 610-704 866-959 (1004)
113 KOG4369 RTK signaling protein 96.4 0.0092 2E-07 72.2 8.6 73 627-700 872-947 (2131)
114 KOG0783 Uncharacterized conser 96.2 0.0059 1.3E-07 72.0 5.5 64 620-687 64-128 (1267)
115 KOG0506 Glutaminase (contains 96.2 0.0036 7.7E-08 70.0 3.3 62 641-702 502-563 (622)
116 KOG0521 Putative GTPase activa 96.1 0.0044 9.6E-08 74.6 4.2 68 627-694 671-738 (785)
117 KOG0520 Uncharacterized conser 96.1 0.0027 5.8E-08 76.6 2.0 70 631-701 627-702 (975)
118 cd01178 IPT_NFAT IPT domain of 95.9 0.035 7.7E-07 50.7 7.7 82 438-527 1-100 (101)
119 KOG3610 Plexins (functional se 95.8 0.022 4.8E-07 69.8 8.2 94 433-531 137-233 (1025)
120 cd01176 IPT_RBP-Jkappa IPT dom 95.6 0.043 9.4E-07 49.0 7.1 66 455-527 20-96 (97)
121 KOG0818 GTPase-activating prot 95.3 0.029 6.2E-07 63.3 5.9 66 639-705 121-193 (669)
122 KOG0521 Putative GTPase activa 94.9 0.015 3.2E-07 70.2 2.7 60 643-703 654-713 (785)
123 cd01177 IPT_NFkappaB IPT domai 94.9 0.085 1.8E-06 48.3 6.9 82 440-527 2-101 (102)
124 smart00248 ANK ankyrin repeats 94.2 0.083 1.8E-06 33.8 4.0 27 645-671 2-28 (30)
125 smart00248 ANK ankyrin repeats 94.0 0.091 2E-06 33.6 3.9 26 677-703 1-26 (30)
126 KOG0782 Predicted diacylglycer 93.9 0.099 2.1E-06 59.8 6.1 85 613-699 901-987 (1004)
127 KOG2505 Ankyrin repeat protein 93.9 0.07 1.5E-06 60.4 4.8 61 626-686 405-471 (591)
128 KOG0511 Ankyrin repeat protein 93.8 0.14 3E-06 56.4 6.7 84 612-701 38-121 (516)
129 PF08549 SWI-SNF_Ssr4: Fungal 91.7 0.39 8.5E-06 56.5 7.0 103 27-137 30-155 (669)
130 KOG3609 Receptor-activated Ca2 91.6 0.18 3.9E-06 60.4 4.3 69 636-705 53-157 (822)
131 KOG0522 Ankyrin repeat protein 90.6 0.29 6.2E-06 56.0 4.5 57 647-704 22-80 (560)
132 KOG0705 GTPase-activating prot 82.7 1.7 3.8E-05 50.3 5.1 58 645-704 625-686 (749)
133 KOG3836 HLH transcription fact 82.4 0.32 7E-06 56.5 -0.8 80 440-534 244-336 (605)
134 KOG3610 Plexins (functional se 74.4 3.1 6.8E-05 51.8 4.1 76 436-511 47-125 (1025)
135 PF14545 DBB: Dof, BCAP, and B 46.8 70 0.0015 31.3 7.0 70 444-518 3-80 (142)
136 PF09099 Qn_am_d_aIII: Quinohe 43.1 79 0.0017 28.1 6.2 64 439-511 2-70 (81)
137 PF03158 DUF249: Multigene fam 42.4 38 0.00082 34.6 4.6 46 648-700 146-191 (192)
138 KOG2505 Ankyrin repeat protein 41.0 43 0.00093 38.9 5.2 45 658-703 404-454 (591)
139 KOG3609 Receptor-activated Ca2 39.7 22 0.00049 43.3 3.0 55 649-704 29-87 (822)
140 KOG3743 Recombination signal b 39.5 21 0.00047 41.4 2.6 45 452-503 505-549 (622)
141 TIGR03437 Soli_cterm Solibacte 39.3 1.2E+02 0.0027 31.6 7.9 64 453-516 4-76 (215)
142 PF06128 Shigella_OspC: Shigel 37.2 58 0.0013 34.5 5.1 46 657-703 229-278 (284)
143 PF03106 WRKY: WRKY DNA -bindi 34.7 18 0.00038 30.2 0.8 9 70-78 2-10 (60)
144 PF05587 Anth_Ig: Anthrax rece 27.7 20 0.00044 33.3 0.0 74 440-516 7-88 (105)
145 smart00774 WRKY DNA binding do 26.3 25 0.00054 29.4 0.3 9 70-78 2-10 (59)
146 PF12728 HTH_17: Helix-turn-he 25.1 56 0.0012 25.4 2.1 42 26-67 1-45 (51)
147 KOG3836 HLH transcription fact 23.5 85 0.0019 37.3 4.0 64 439-510 323-398 (605)
148 PF01913 FTR: Formylmethanofur 20.2 50 0.0011 32.4 1.1 20 63-83 119-138 (144)
149 KOG2384 Major histocompatibili 20.2 2.1E+02 0.0047 29.6 5.6 42 629-670 29-71 (223)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=1.2e-101 Score=890.66 Aligned_cols=611 Identities=36% Similarity=0.552 Sum_probs=392.6
Q ss_pred CCCCCCcccHHHHHHHHHHhhCChHHHHHHHHcccccccccCCCCCCCCCceEeeehhhhhhhhccCcceeecCCCcchh
Q 005246 6 RYVPNQQLDLEQILQEAQYRWLRPTEICEILRNYQKFHLTPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVK 85 (706)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~rwl~~~ei~~il~~~~~~~~~~~~~~~p~~gs~~l~~r~~~~~frkdg~~w~kkk~g~~~~ 85 (706)
-|...+.||+..|++||++|||+|+||+.||+||++|.|+++|++||.+||+||||||+|||||||||+|||||||||||
T Consensus 16 ~~~sl~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~WkKkkDGKtir 95 (975)
T KOG0520|consen 16 PFKSLQDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHNWKKKKDGKTIR 95 (975)
T ss_pred chhhhhhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchhhhhcCCCCcCh
Confidence 45556889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhccCCEeeEEEEeecccCCCcccceeeeeccCCCcceEEEeeeccccCCCCCCCCCCCCCCcCCccccccccccc
Q 005246 86 EAHEKLKAGSIDVLHCYYAHGEDNENFQRRSYWMLDGQLEHIVLVHYREVKEGYKSGRSAADPGSQIESSQTSSARSLAQ 165 (706)
Q Consensus 86 e~h~~lkv~~~~~~~~~y~h~~~~~~f~rr~yw~l~~~~~~ivlvhy~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 165 (706)
||||||||||+|+||||||||++||||||||||||++.++||||||||||++-+...+......+.+ + +.
T Consensus 96 EaHe~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~~~~~~~~s~-------~---sd 165 (975)
T KOG0520|consen 96 EAHEKLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAKGAGEIFSSI-------I---SD 165 (975)
T ss_pred HHHHhhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeecccccccccCcccccccc-------c---cc
Confidence 9999999999999999999999999999999999999999999999999995333222222211111 1 11
Q ss_pred cCCCCCcccCCCCCCccccccCCcccccccccccCCCCCCCCCccccccc------ccccccchhhccccCCccccCCCC
Q 005246 166 ANSSAPAAQTSHASIPNKIDWNGQAVSSEFEDVDSGHGSGTPSVAQSIYG------SMSQNASLVAASIAGLPELSRHPQ 239 (706)
Q Consensus 166 ~~s~~~~~~~~~~~s~~~~~~~~~~~~~e~ed~~s~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 239 (706)
..-+ ..+..+..++ -++ + + .+..+|+++..+.+.+..+-...+ +.....+... .+..+..-..
T Consensus 166 ~~~S--~~~~~~q~~~-~~~-~-~--~s~~~~v~~i~s~~~~~~~g~~~~~s~~h~i~~~~~~s~~----~~~~~p~s~~ 234 (975)
T KOG0520|consen 166 KAWS--LNQLAGQLSP-IFH-N-H--SSVNEDVAEINSNQTGNALGSVFGNSRNHRIRLHEVNSLD----PLYKLPVSDD 234 (975)
T ss_pred cccc--HHHhhcccCc-chh-c-c--cchHHHHHHHhhhccccccccccCcchhhhhcccccCCcc----ccccccccCC
Confidence 1100 1122222222 000 0 1 133555555443332222111110 0000000000 0000000000
Q ss_pred cccCC-----CCCCCCCCCCCCccCCCCccccccccccCCCccccCCCCCccccccccchhccccCccccccCccccccc
Q 005246 240 WFAGS-----KINHGSGSSMWPQIDNSSRNATSVLDQHGHQNFYVGQPSGADFITHKLTDARLASDSTIANIGTCGERLI 314 (706)
Q Consensus 240 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (706)
+.+.. .+..+...-.+...+...|.++..+.. ......++ . ..+.+....
T Consensus 235 s~~~~~~~~~~~~~~~~~~~~rs~~~s~~te~l~n~~----~~~~~~g~--s-~s~~l~~i~------------------ 289 (975)
T KOG0520|consen 235 SLNLSAPKPIDLPKGPTSVKQRSSSPSYFTEILGNAP----SGLVSQGN--S-LSSSLQRIS------------------ 289 (975)
T ss_pred ccccccCCCcccccCCcchhhcCCCCcchhhhcccCC----Cccccccc--c-cccchhhcc------------------
Confidence 00000 000000000001111222333332222 00000000 0 000000000
Q ss_pred ccccccccccccccchhhhhhccccccccc------------ccCCCCCcccc-ccccc--cCCCCccccccccccccch
Q 005246 315 TDIDVHAVTTSSQGASQVLLEHNFNLINNQ------------CQNCPVPEVTV-ASVSQ--AGIKPKEELGELKKLDSFG 379 (706)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-~~~~~--~~~l~~~~~~~lkk~dsf~ 379 (706)
+|+......-+.+.-.+|..+++. .++........ ...+. ...+ .+++||+.|||+
T Consensus 290 ------~~~~~~~~~~~~p~~~nf~~~ss~~s~~~~~~~g~g~~~~~~sa~~~~~P~~~~~~~~~---~~~~l~sgdsf~ 360 (975)
T KOG0520|consen 290 ------SFTGLDNAAYEQPNSQNFEPNSSLNSHVTGQSYGQGLQARSPSATSESRPITSAADAAL---SELGLKSGDSFS 360 (975)
T ss_pred ------cccccccccccCCccccccccccCCCCccccccCccccCCCcccccccCCcchhhcccc---cccccccccccc
Confidence 000000000000000000000000 00000000000 00000 0012 268999999999
Q ss_pred hhhhhhhccCcCCCcccCCCCCcccccccccCCcccccccccccccccccCCCccccCceEEEeecCCCccCCCceEEEE
Q 005246 380 RWMDQEIGGDCDDSLMASDSGNYWNTLDAENDDKEVSSLSHHMQLEMDSLGPSLSQEQLFSIRDFSPDWAYSGAETKVLI 459 (706)
Q Consensus 380 rwm~~~l~~~~~~~~~~~s~~~~w~~~~~~~~~~~~s~~s~~~~l~~~~~~~s~~q~qlfsI~d~sP~wg~~~ggtKVlI 459 (706)
|||+ .+++ ..|..-.++-+.+|.... +...+.+ ..++|| +++|+|+|+||||+|+|..||+||+|
T Consensus 361 ~~~~-t~~e-~~d~~q~~s~~~~~~p~~--~~~~~~~----------s~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV 425 (975)
T KOG0520|consen 361 RWAS-TFGE-ISDLGQDPSGEAVWTPEN--DPMGPPG----------SFLSPS-SPEQLFTITDFSPEWSYLDGGVKVLV 425 (975)
T ss_pred chhh-hhcc-cccCCCCCccccccccCC--CcCCCcc----------cccCCC-CCcceeeeeccCcccccCCCCcEEEE
Confidence 9996 7777 555542233356787663 2222222 226777 44999999999999999999999999
Q ss_pred EccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCCCCceeeEEEEeC-CCcccCceeeeeeecCCCCCCCCcc
Q 005246 460 IGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGS-NRLACSEVREFEYREKPSKAGYPVA 538 (706)
Q Consensus 460 ~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph~pG~Vpl~Vt~~-n~~~cSEvreFEYr~~~~~~~~~~~ 538 (706)
+|++ ++.+...|+||||+++|||++|++|||||+||||.||+|+|||+|+ ++.+|||+|+|+|...+.+..+..+
T Consensus 426 ~G~~----~~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s 501 (975)
T KOG0520|consen 426 TGFP----QDETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVNLQVTCRISGLACSEVREFAYLVQPSQQIDKLS 501 (975)
T ss_pred ecCc----cccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEEEEEEecccceeeeeehheeecccCcccccccc
Confidence 9983 4567899999999999999999999999999999999999999999 9999999999999998887764432
Q ss_pred ccCCChhHHHHHHHHHHHhh-cCCCcccccccccccchhh--hhhhhhhccCCCCCcccc-ccCCCccccCCC---CchH
Q 005246 539 SKIAPEDEVRLQTRLAKFLY-LDPERKWFDCTIEDCNKCK--LKNTIYSMRGDSEKDWGR-VDESPMAIEGDC---PNSR 611 (706)
Q Consensus 539 ~~~~~~~E~~LqmRl~kLL~-l~~~~~~~~~~~~~~~~~~--l~~~issl~~~~~d~w~~-L~e~l~~~~~n~---~~~~ 611 (706)
. .....++.|+.|+.+|+. .-....+...+.+..+... |+.++..+ .++|.+ + +.....+. ..++
T Consensus 502 ~-~d~~~~~sl~~rl~~~~~r~~~~~~s~~~~~n~~~~~~~~l~skv~~l----~~~~~~r~---~~~~~~~~~~~~~~r 573 (975)
T KOG0520|consen 502 W-EDFLFQMSLLHRLETMLNRKQSILSSKPSTENTSDAESGNLASKVVHL----LNEWAYRL---LKSISENLSSSVNFR 573 (975)
T ss_pred c-ccchhhhHHHHHHHHHHHHhHhHhhccCCccccccccchhHHHHHHHH----HHHHHHHH---HhhHhhhccccCCCc
Confidence 1 122233444455555544 1111223344555556655 78888777 677877 5 33333333 8899
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 005246 612 DKLIQNLLRNRLCEWLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 690 (706)
Q Consensus 612 d~LLe~llk~kl~e~Lv~kLle~-GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh 690 (706)
+++|+.++++.+++||++++++. |......|.+|++.+|++|.+|+.|++.+++..|..++++|.+||||||||+.+||
T Consensus 574 ~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~ 653 (975)
T KOG0520|consen 574 DMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGR 653 (975)
T ss_pred chHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCH
Confidence 99999999999999999999996 88888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 005246 691 LGCYLEVL 698 (706)
Q Consensus 691 ~eiVa~LL 698 (706)
+.+++.|.
T Consensus 654 e~l~a~l~ 661 (975)
T KOG0520|consen 654 EKLVASLI 661 (975)
T ss_pred HHHHHHHH
Confidence 99995554
No 2
>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=100.00 E-value=2.7e-62 Score=444.47 Aligned_cols=117 Identities=67% Similarity=1.236 Sum_probs=114.5
Q ss_pred HHHHHHhhCChHHHHHHHHcccccccccCCCCCCCCCceEeeehhhhhhhhccCcceeecCCCcchhhhhhhhccCCEee
Q 005246 19 LQEAQYRWLRPTEICEILRNYQKFHLTPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSIDV 98 (706)
Q Consensus 19 ~~~~~~rwl~~~ei~~il~~~~~~~~~~~~~~~p~~gs~~l~~r~~~~~frkdg~~w~kkk~g~~~~e~h~~lkv~~~~~ 98 (706)
++| ++|||+|+||++||+||++|.+..+||+||+|||+|||||+++||||||||+|||||||||||||||||||||+|+
T Consensus 2 ~~~-~~rWl~~~Ei~~IL~n~~~~~~~~~~~~rP~sGslfLf~Rk~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~ 80 (118)
T PF03859_consen 2 LKE-KTRWLKPEEIAFILLNYEKFQIWLEPPNRPPSGSLFLFNRKVVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEV 80 (118)
T ss_pred chH-hcccCCHHHHHHHHHhHHhCCcccCCCCCCCCceEEEEEchHhhhhhcccceeEEcCCCCchhhhhhhhccCceee
Confidence 445 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecccCCCcccceeeeeccCCCcceEEEeeeccc
Q 005246 99 LHCYYAHGEDNENFQRRSYWMLDGQLEHIVLVHYREVK 136 (706)
Q Consensus 99 ~~~~y~h~~~~~~f~rr~yw~l~~~~~~ivlvhy~~~~ 136 (706)
||||||||++||+||||||||||++|+||||||||||+
T Consensus 81 l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~ 118 (118)
T PF03859_consen 81 LNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK 118 (118)
T ss_pred eEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence 99999999999999999999999999999999999985
No 3
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.61 E-value=2.1e-15 Score=129.71 Aligned_cols=80 Identities=28% Similarity=0.442 Sum_probs=70.6
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCC-CCCceeeEEEEeCCCccc
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRLAC 518 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-h~pG~Vpl~Vt~~n~~~c 518 (706)
.|++|+|+||+++|||||+|+|.+|.+ ++.||||++.|-.|.|++.+|+|.+|| |.||.|.|.++.....-|
T Consensus 2 ~I~ai~P~eG~~tGGt~VtI~GenF~~-------gl~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~~ 74 (85)
T cd01175 2 CIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFC 74 (85)
T ss_pred cccEecCCCCcccCCeEEEEECCCCCC-------CcEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceeec
Confidence 599999999999999999999987755 799999999999999999999999999 999999999998877666
Q ss_pred Cc-eeeeee
Q 005246 519 SE-VREFEY 526 (706)
Q Consensus 519 SE-vreFEY 526 (706)
.- .-.|-|
T Consensus 75 ~~~p~~f~y 83 (85)
T cd01175 75 KGTPGRFVY 83 (85)
T ss_pred cCCCceEEe
Confidence 42 234554
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=3.8e-12 Score=124.94 Aligned_cols=78 Identities=27% Similarity=0.236 Sum_probs=72.9
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
+...|+++|+.++.+|+.|+||||-||..|...++++|+..|+.+|.+|+.||||||.|..-||.++. .||++.++.+
T Consensus 121 IaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a-~lLV~~gAd~ 198 (226)
T KOG4412|consen 121 IAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVA-VLLVRAGADT 198 (226)
T ss_pred HHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHH-HHHHHhccce
Confidence 46678889999999999999999999999999999999999999999999999999999888999996 9999988754
No 5
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=99.22 E-value=5.2e-11 Score=101.99 Aligned_cols=84 Identities=21% Similarity=0.351 Sum_probs=75.3
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeE-EeecCeeeeccCCCCCceeeEEEEeCCCcc
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAE-VLTDNVIRCQAPSHAAGRVPFYITGSNRLA 517 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae-~~~~GvLrC~~Pph~pG~Vpl~Vt~~n~~~ 517 (706)
+.|++|+|+|++..||++|+|.|.+|.. ....+.|+||+.+.++. ++++..|+|.+|++.+|.+++.|..++...
T Consensus 1 P~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~ 76 (85)
T PF01833_consen 1 PVITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQI 76 (85)
T ss_dssp SEEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEE
T ss_pred CEEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCe
Confidence 3699999999999999999999999922 24589999999999998 999999999999999999999999999888
Q ss_pred cCceeeeee
Q 005246 518 CSEVREFEY 526 (706)
Q Consensus 518 cSEvreFEY 526 (706)
+++...|+|
T Consensus 77 ~~~~~~F~Y 85 (85)
T PF01833_consen 77 YSNNTSFTY 85 (85)
T ss_dssp EEEEEEEEE
T ss_pred EECCeeeEC
Confidence 899999998
No 6
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.20 E-value=9.5e-11 Score=101.56 Aligned_cols=73 Identities=27% Similarity=0.357 Sum_probs=64.5
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.+.+++. |.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++.
T Consensus 12 ~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~-~~Ll~~g~~ 84 (89)
T PF12796_consen 12 ILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV-KLLLEHGAD 84 (89)
T ss_dssp HHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH-HHHHHTTT-
T ss_pred HHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH-HHHHHcCCC
Confidence 45667777887775 99999999999999999999999999999999999999999999999999 888887654
No 7
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.19 E-value=1.7e-11 Score=99.12 Aligned_cols=55 Identities=35% Similarity=0.529 Sum_probs=33.6
Q ss_pred HHhCC-CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHH
Q 005246 631 IHEGG-KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWA 685 (706)
Q Consensus 631 Lle~G-adiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~A 685 (706)
|++.| ++++.+|..|.||||+||..|+.++|++|+..|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 34556 89999999999999999999999999999999999999999999999998
No 8
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.16 E-value=6.1e-11 Score=94.61 Aligned_cols=54 Identities=30% Similarity=0.453 Sum_probs=45.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005246 645 GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLI 699 (706)
Q Consensus 645 G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLl 699 (706)
|+||||+||..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++ ++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~-~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIV-KFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHH-HHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHH-HHHC
Confidence 78999999999999999999999999999999999999999999999999 6554
No 9
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=1.6e-10 Score=113.63 Aligned_cols=77 Identities=29% Similarity=0.366 Sum_probs=55.6
Q ss_pred HHHHHHhC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~-GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|+.+ |+++|..+..|+|+||+||..|..+++.+|+..|+.++.+|+.|.||||=||.-|..++| .+|+..++-
T Consensus 87 vVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvi-e~Li~~~a~ 164 (226)
T KOG4412|consen 87 VVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVI-EYLISQGAP 164 (226)
T ss_pred HHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhH-HHHHhcCCC
Confidence 45555555 777777777777777777777777777777777777777777777777777777777777 666666543
No 10
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=99.06 E-value=1.1e-09 Score=96.05 Aligned_cols=84 Identities=20% Similarity=0.290 Sum_probs=70.7
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCC-CCceeeEEEEeCCCcc
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRLA 517 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph-~pG~Vpl~Vt~~n~~~ 517 (706)
+.|+.|+|..|+..|||+|+|.|.+|.. .....|+||+.+.....+++..|.|.+|++ .+|.|+|.|..++..
T Consensus 1 P~I~~i~P~~Gp~~GGT~vtI~G~~~~~-----~~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~~- 74 (85)
T cd01179 1 PSITSLSPSYGPQSGGTRLTITGKHLNA-----GSSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGAR- 74 (85)
T ss_pred CeeeEEcCCCCCCCCCEEEEEEEECCCC-----CCeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCcc-
Confidence 3699999999999999999999999965 235899999998777778899999999995 478999999998873
Q ss_pred cCceeeeeeec
Q 005246 518 CSEVREFEYRE 528 (706)
Q Consensus 518 cSEvreFEYr~ 528 (706)
.+....|+|.+
T Consensus 75 ~~~~~~F~Y~~ 85 (85)
T cd01179 75 RLAPLVFTYTE 85 (85)
T ss_pred cCCCccEEEeC
Confidence 34457899874
No 11
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=3e-10 Score=125.41 Aligned_cols=94 Identities=23% Similarity=0.223 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Q 005246 610 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 689 (706)
Q Consensus 610 ~~d~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~G 689 (706)
....||.+.|...+ .|+++++..-.|+...+..|.|+||-|...||..+|+||+..|++||+.|.+||||||+||.++
T Consensus 550 PLaLLLDaaLeGEl--dlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCN 627 (752)
T KOG0515|consen 550 PLALLLDAALEGEL--DLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCN 627 (752)
T ss_pred hHHHHHhhhhcchH--HHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcC
Confidence 33445566666555 3555555556788888999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCC
Q 005246 690 RLGCYLEVLIKFLIYIL 706 (706)
Q Consensus 690 h~eiVa~LLle~~~~i~ 706 (706)
+..++ +.|++.++.|+
T Consensus 628 nv~~c-kqLVe~Gaavf 643 (752)
T KOG0515|consen 628 NVPMC-KQLVESGAAVF 643 (752)
T ss_pred chHHH-HHHHhccceEE
Confidence 99998 88889888764
No 12
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=99.03 E-value=1.4e-09 Score=94.37 Aligned_cols=83 Identities=24% Similarity=0.339 Sum_probs=69.9
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEee-CCeeeeeEEeecCeeeeccCCCCC---ceeeEEEEeCCC
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF-GEIEVPAEVLTDNVIRCQAPSHAA---GRVPFYITGSNR 515 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmF-Gd~eVpae~~~~GvLrC~~Pph~p---G~Vpl~Vt~~n~ 515 (706)
.|+.|+|.+|+..|||+|+|.|.+|... ..+.|+| |+.......+++..|.|.+|++.. |.|.|.|...+.
T Consensus 2 ~I~~i~P~~g~~~GGt~itI~G~~f~~~-----~~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (89)
T cd00102 2 VITSISPSSGPVSGGTEVTITGSNFGSG-----SNLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGNG 76 (89)
T ss_pred EEeEEECCcCCCCCCeEEEEEEECCCCC-----CcEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCCC
Confidence 6999999999999999999999999652 2699999 999887777899999999999444 888888876664
Q ss_pred cccCceeeeeee
Q 005246 516 LACSEVREFEYR 527 (706)
Q Consensus 516 ~~cSEvreFEYr 527 (706)
...+....|+|.
T Consensus 77 ~~~~~~~~F~Y~ 88 (89)
T cd00102 77 GITSSPLTFTYV 88 (89)
T ss_pred cccCCCccEEee
Confidence 456777889985
No 13
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.02 E-value=1.2e-09 Score=104.68 Aligned_cols=75 Identities=15% Similarity=-0.067 Sum_probs=67.9
Q ss_pred HHHHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 628 VWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 628 v~kLle~GadiN~~D-~~G~TpLHlAA~lG~~~~V~~LL~-~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
++.|+..|++++.++ ..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+..|+.+++ .+|++.++
T Consensus 74 v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~-~~Ll~~ga 150 (154)
T PHA02736 74 LKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMM-NILRAKGA 150 (154)
T ss_pred HHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHH-HHHHHcCC
Confidence 445667899999998 589999999999999999999998 5999999999999999999999999998 78877765
No 14
>PHA02795 ankyrin-like protein; Provisional
Probab=99.02 E-value=8.9e-10 Score=122.93 Aligned_cols=79 Identities=23% Similarity=0.167 Sum_probs=72.0
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC--------CHHHHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG--------RLGCYLEV 697 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~G--------h~eiVa~L 697 (706)
.+++.|+..|+++|.+|..|.||||+|+..|+.+++++|+..|+++|.+|..|+||||+|+..| |.++| ++
T Consensus 202 eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIv-el 280 (437)
T PHA02795 202 EIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKIL-EI 280 (437)
T ss_pred HHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHH-HH
Confidence 4567788899999999999999999999999999999999999999999999999999999998 46898 78
Q ss_pred HHHcCCCC
Q 005246 698 LIKFLIYI 705 (706)
Q Consensus 698 Lle~~~~i 705 (706)
|++.++.|
T Consensus 281 LL~~gadI 288 (437)
T PHA02795 281 LLREPLSI 288 (437)
T ss_pred HHhCCCCC
Confidence 88876643
No 15
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.01 E-value=9.1e-10 Score=107.74 Aligned_cols=94 Identities=19% Similarity=0.175 Sum_probs=77.5
Q ss_pred chHHHHHHHHHHhHHHHHHHHHHHhCC-CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 005246 609 NSRDKLIQNLLRNRLCEWLVWKIHEGG-KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 687 (706)
Q Consensus 609 ~~~d~LLe~llk~kl~e~Lv~kLle~G-adiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~ 687 (706)
+....++-+..++++. .+++|+... ..+|.+|.+|.||||-|+..||.++|..|+..|++++++...||||||-||.
T Consensus 62 dp~rl~lwaae~nrl~--eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAck 139 (228)
T KOG0512|consen 62 DPIRLLLWAAEKNRLT--EVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACK 139 (228)
T ss_pred CHHHHHHHHHhhccHH--HHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhc
Confidence 3444455555555553 355666544 4579999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHcCCCC
Q 005246 688 FGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 688 ~Gh~eiVa~LLle~~~~i 705 (706)
.++.+|+ -+|+.+++.|
T Consensus 140 WnN~~va-~~LLqhgaDV 156 (228)
T KOG0512|consen 140 WNNFEVA-GRLLQHGADV 156 (228)
T ss_pred ccchhHH-HHHHhccCcc
Confidence 9999998 8888877654
No 16
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.01 E-value=2.8e-10 Score=124.63 Aligned_cols=88 Identities=22% Similarity=0.256 Sum_probs=78.7
Q ss_pred HHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 005246 615 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCY 694 (706)
Q Consensus 615 Le~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiV 694 (706)
..+++...+ -+++.|+++|+|+++.|..|.|-||+||..|+.+++++|++.|+|+|.++..|.||||.|+..|+.++|
T Consensus 122 raACfDG~l--eivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdiv 199 (615)
T KOG0508|consen 122 RAACFDGHL--EIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIV 199 (615)
T ss_pred HHHHhcchh--HHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHH
Confidence 344444444 357778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCC
Q 005246 695 LEVLIKFLIYI 705 (706)
Q Consensus 695 a~LLle~~~~i 705 (706)
++|+++++.|
T Consensus 200 -q~Ll~~ga~i 209 (615)
T KOG0508|consen 200 -QLLLKHGAKI 209 (615)
T ss_pred -HHHHhCCcee
Confidence 9999988765
No 17
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.01 E-value=1.4e-09 Score=106.22 Aligned_cols=77 Identities=18% Similarity=0.065 Sum_probs=69.6
Q ss_pred HHHHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 628 VWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 628 v~kLle~GadiN~~D-~~G~TpLHlAA~lG~~~~V~~LL~-~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
++.|+..|+++|.+| ..|.||||+|+..|+..++++|+. .|++++.+|..|+||||+|+..|+.+++ .+|++.++.+
T Consensus 76 i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv-~~Ll~~ga~~ 154 (166)
T PHA02743 76 IELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMM-EILRANGAVC 154 (166)
T ss_pred HHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHH-HHHHHcCCCC
Confidence 556677899999998 589999999999999999999995 7999999999999999999999999998 8888876643
No 18
>PHA02946 ankyin-like protein; Provisional
Probab=98.99 E-value=1.2e-09 Score=122.96 Aligned_cols=80 Identities=24% Similarity=0.354 Sum_probs=70.7
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC--HHHHHHHHHHcC
Q 005246 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR--LGCYLEVLIKFL 702 (706)
Q Consensus 625 e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh--~eiVa~LLle~~ 702 (706)
..+++.|+..|+++|.+|..|.||||+||..|+.++|++|+.+|+++|.+|..|+||||+|+..++ .+++ ++|++.+
T Consensus 52 ~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v-~lLl~~G 130 (446)
T PHA02946 52 ERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERI-NLLVQYG 130 (446)
T ss_pred HHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHH-HHHHHcC
Confidence 346777888899999999999999999999999999999999999999999999999999988764 7787 8888877
Q ss_pred CCC
Q 005246 703 IYI 705 (706)
Q Consensus 703 ~~i 705 (706)
+.|
T Consensus 131 adi 133 (446)
T PHA02946 131 AKI 133 (446)
T ss_pred CCc
Confidence 654
No 19
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.99 E-value=1.4e-09 Score=106.33 Aligned_cols=77 Identities=22% Similarity=0.206 Sum_probs=65.9
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHH---HHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHHH-c
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWA---MRPIIATGVSPNFRD-ARGRTALHWASYFGRLGCYLEVLIK-F 701 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~---V~~LL~~GadvN~rD-~~G~TPLH~Aa~~Gh~eiVa~LLle-~ 701 (706)
+++.|.+.|+.++.+|..|+||||+||..|.... +++|+..|+++|.+| ..|+||||+|+..|+.+++ ++|++ .
T Consensus 39 ~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv-~~Ll~~~ 117 (166)
T PHA02743 39 VAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELA-EWLCRQL 117 (166)
T ss_pred HHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHH-HHHHhcc
Confidence 3445667888999999999999999999988654 789999999999998 5899999999999999999 66663 5
Q ss_pred CCC
Q 005246 702 LIY 704 (706)
Q Consensus 702 ~~~ 704 (706)
++.
T Consensus 118 gad 120 (166)
T PHA02743 118 GVN 120 (166)
T ss_pred CCC
Confidence 543
No 20
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.94 E-value=2.9e-09 Score=117.33 Aligned_cols=76 Identities=18% Similarity=0.220 Sum_probs=45.7
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
+++.|++.|++++.++..|.||||+|+..|..+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++
T Consensus 117 iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv-~~Ll~~ga 192 (413)
T PHA02875 117 IMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAIC-KMLLDSGA 192 (413)
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHhCCC
Confidence 34455555666666666666666666666666666666666666666666666666666666666665 55555443
No 21
>PHA02791 ankyrin-like protein; Provisional
Probab=98.92 E-value=3.4e-09 Score=112.79 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=46.5
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-cHHHHHHHcCCHHHHHHHHHH
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR-TALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~-TPLH~Aa~~Gh~eiVa~LLle 700 (706)
+++.|+..|++++.+|..|+||||+||..|+.+++++|+..|++++.++..|+ ||||+|+..|+.++| ++|++
T Consensus 76 iV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eiv-k~LL~ 149 (284)
T PHA02791 76 IVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIV-SYFLS 149 (284)
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHH-HHHHh
Confidence 34455556666666666666666666666666666666666666666666664 566666666666666 44444
No 22
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=98.92 E-value=2.2e-09 Score=121.65 Aligned_cols=89 Identities=29% Similarity=0.396 Sum_probs=73.3
Q ss_pred HHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 005246 615 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCY 694 (706)
Q Consensus 615 Le~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiV 694 (706)
|+-+..+... .++..|+++||+++.+|.+|.++||+||..|+.-.|.+||.+|++++.+|.+|+|||||||..|+...+
T Consensus 116 LHWAar~G~~-~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v 194 (600)
T KOG0509|consen 116 LHWAARNGHI-SVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFV 194 (600)
T ss_pred chHHHHcCcH-HHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHH
Confidence 4444443332 456778889999999999999999999999999999999999999999999999999999999998876
Q ss_pred HHHHHHcCCCC
Q 005246 695 LEVLIKFLIYI 705 (706)
Q Consensus 695 a~LLle~~~~i 705 (706)
.+|++.++-+
T Consensus 195 -~~LL~f~a~~ 204 (600)
T KOG0509|consen 195 -RRLLKFGASL 204 (600)
T ss_pred -HHHHHhcccc
Confidence 7777776543
No 23
>PHA03095 ankyrin-like protein; Provisional
Probab=98.91 E-value=4e-09 Score=117.60 Aligned_cols=77 Identities=23% Similarity=0.147 Sum_probs=69.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.++..++..|+++|.+|..|+||||+|+..|+..++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++
T Consensus 238 ~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v-~~LL~~~~ 314 (471)
T PHA03095 238 SLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAV-RAALAKNP 314 (471)
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHH-HHHHHhCC
Confidence 355667888999999999999999999999999999999999999999999999999999999999999 66665543
No 24
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.90 E-value=5.1e-09 Score=112.24 Aligned_cols=77 Identities=19% Similarity=0.193 Sum_probs=57.4
Q ss_pred HHHHHHhCCCCCCccC----CCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 627 LVWKIHEGGKGPNVID----DGGQGVVHLAAALGYEWAMRPIIATGVSPNFR-DARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 627 Lv~kLle~GadiN~~D----~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~r-D~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
+++.|++.|+++|.++ ..|.||||+||..|..+++++|+.+|+++|.+ +..|.||||+|+..|+.+++ ++|++.
T Consensus 48 ivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eiv-klLL~~ 126 (300)
T PHA02884 48 IIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCL-EILLSY 126 (300)
T ss_pred HHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHH-HHHHHC
Confidence 4556667788887763 47888888888888888888888888888875 45688888888888888887 777766
Q ss_pred CCC
Q 005246 702 LIY 704 (706)
Q Consensus 702 ~~~ 704 (706)
++.
T Consensus 127 GAd 129 (300)
T PHA02884 127 GAD 129 (300)
T ss_pred CCC
Confidence 654
No 25
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.90 E-value=3.4e-09 Score=127.60 Aligned_cols=88 Identities=24% Similarity=0.319 Sum_probs=75.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 005246 612 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRL 691 (706)
Q Consensus 612 d~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~ 691 (706)
..|+.++..... .+++.|++.|+++|..|..|+||||+||..|+.+++++|+.+|+++|.+|.+|+||||+|+..||.
T Consensus 527 ~~L~~Aa~~g~~--~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~ 604 (823)
T PLN03192 527 SNLLTVASTGNA--ALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHH 604 (823)
T ss_pred hHHHHHHHcCCH--HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence 344555444333 457788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcC
Q 005246 692 GCYLEVLIKFL 702 (706)
Q Consensus 692 eiVa~LLle~~ 702 (706)
+++ ++|++.+
T Consensus 605 ~iv-~~L~~~~ 614 (823)
T PLN03192 605 KIF-RILYHFA 614 (823)
T ss_pred HHH-HHHHhcC
Confidence 998 7776554
No 26
>PHA02741 hypothetical protein; Provisional
Probab=98.90 E-value=5.9e-09 Score=101.90 Aligned_cols=76 Identities=17% Similarity=0.172 Sum_probs=68.8
Q ss_pred HHHHHHHhCCCCCCccCC-CCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 626 WLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~-~G~TpLHlAA~lG~~~~V~~LL~-~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
.+++.|+..|+++|.++. .|.||||+|+..++.+++++|+. .|++++.+|..|+||||+|+..|+.+++ .+|+++.
T Consensus 78 ~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv-~~L~~~~ 155 (169)
T PHA02741 78 EIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMM-QILREIV 155 (169)
T ss_pred HHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHH-HHHHHHH
Confidence 456677788999999985 89999999999999999999997 5999999999999999999999999998 8877653
No 27
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.90 E-value=2.4e-09 Score=95.27 Aligned_cols=72 Identities=26% Similarity=0.303 Sum_probs=64.1
Q ss_pred HHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 630 KIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 630 kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.....|.++|.. ..|++|||+||-.|...++++|+..|++++.+|+.|.|||--|++.||.+|| +||++.++
T Consensus 20 ~~v~~g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV-klLL~~GA 91 (117)
T KOG4214|consen 20 QSVNEGLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV-KLLLQNGA 91 (117)
T ss_pred HHHHccccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH-HHHHHcCc
Confidence 344456777743 4899999999999999999999999999999999999999999999999999 89888765
No 28
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=98.90 E-value=3.1e-09 Score=120.37 Aligned_cols=82 Identities=28% Similarity=0.326 Sum_probs=71.7
Q ss_pred HHHhHHHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHH
Q 005246 618 LLRNRLCEWLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLE 696 (706)
Q Consensus 618 llk~kl~e~Lv~kLle~GadiN~~D-~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~ 696 (706)
++++++ .+.+.|+++|+++|..+ ..+.|||||||..|+..+|.+|+.+||+++.+|.+|.||||.||.+||.-.|+-
T Consensus 86 AiNNrl--~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vay 163 (600)
T KOG0509|consen 86 AINNRL--DVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAY 163 (600)
T ss_pred HHcCcH--HHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHH
Confidence 345555 35667788899999988 679999999999999999999999999999999999999999999999999955
Q ss_pred HHHHc
Q 005246 697 VLIKF 701 (706)
Q Consensus 697 LLle~ 701 (706)
||.+.
T Consensus 164 ll~~~ 168 (600)
T KOG0509|consen 164 LLSKG 168 (600)
T ss_pred HHHhc
Confidence 55544
No 29
>PHA02791 ankyrin-like protein; Provisional
Probab=98.89 E-value=5.3e-09 Score=111.30 Aligned_cols=77 Identities=22% Similarity=0.277 Sum_probs=69.0
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
.+++.|++.|++++..+ |.||||+|+..|+.++|++|+..|++++.+|..|+||||+||..|+.++| ++|++.++.|
T Consensus 44 eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv-k~Ll~~gadi 120 (284)
T PHA02791 44 RLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTV-KLFVKKNWRL 120 (284)
T ss_pred HHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHHCCCCc
Confidence 45667888899988764 78999999999999999999999999999999999999999999999999 8888876643
No 30
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.89 E-value=6.7e-09 Score=105.29 Aligned_cols=79 Identities=16% Similarity=0.169 Sum_probs=69.6
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCCcHHHH-HHHcCCHHHHHHHHHHcC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAA--LGYEWAMRPIIATGVSPNFRDARGRTALHW-ASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~--lG~~~~V~~LL~~GadvN~rD~~G~TPLH~-Aa~~Gh~eiVa~LLle~~ 702 (706)
-+++.|++.|+++|.+|..|+||||+|+. .++.+++++|+..|++++.+|..|.||||. |+..|+.++| .+|++.+
T Consensus 104 eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv-~~Ll~~G 182 (209)
T PHA02859 104 EILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIF-DFLTSLG 182 (209)
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHH-HHHHHcC
Confidence 45677888999999999999999999876 468999999999999999999999999995 6678899998 8888887
Q ss_pred CCC
Q 005246 703 IYI 705 (706)
Q Consensus 703 ~~i 705 (706)
+.|
T Consensus 183 adi 185 (209)
T PHA02859 183 IDI 185 (209)
T ss_pred CCC
Confidence 643
No 31
>PHA02741 hypothetical protein; Provisional
Probab=98.88 E-value=6.4e-09 Score=101.67 Aligned_cols=69 Identities=29% Similarity=0.227 Sum_probs=61.7
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCC----HHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcCCHHHHHHHHHH-cCC
Q 005246 634 GGKGPNVIDDGGQGVVHLAAALGY----EWAMRPIIATGVSPNFRDA-RGRTALHWASYFGRLGCYLEVLIK-FLI 703 (706)
Q Consensus 634 ~GadiN~~D~~G~TpLHlAA~lG~----~~~V~~LL~~GadvN~rD~-~G~TPLH~Aa~~Gh~eiVa~LLle-~~~ 703 (706)
.|++++.+|..|+||||+|+..|+ ..++++|+..|+++|.+|. .|+||||+|+..++.+++ ++|++ .++
T Consensus 49 ~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv-~~Ll~~~g~ 123 (169)
T PHA02741 49 HAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLA-EWLCCQPGI 123 (169)
T ss_pred hhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHH-HHHHhCCCC
Confidence 468899999999999999999998 4889999999999999995 999999999999999999 67765 344
No 32
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.87 E-value=6.2e-09 Score=117.37 Aligned_cols=92 Identities=17% Similarity=0.204 Sum_probs=73.5
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc-CC
Q 005246 612 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF-GR 690 (706)
Q Consensus 612 d~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~-Gh 690 (706)
...|+.+....- ..+++.|++.|++++.+|..|.||||+|+..|+..++++|+..|++++.+|..|+||||+|+.. ++
T Consensus 169 ~tpLh~A~~~~~-~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~ 247 (477)
T PHA02878 169 NTALHYATENKD-QRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKD 247 (477)
T ss_pred CCHHHHHHhCCC-HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCC
Confidence 334555544332 3456778888999999999999999999999999999999999999999999999999999975 68
Q ss_pred HHHHHHHHHHcCCCC
Q 005246 691 LGCYLEVLIKFLIYI 705 (706)
Q Consensus 691 ~eiVa~LLle~~~~i 705 (706)
.++| ++|++.++.+
T Consensus 248 ~~iv-~~Ll~~gadv 261 (477)
T PHA02878 248 YDIL-KLLLEHGVDV 261 (477)
T ss_pred HHHH-HHHHHcCCCC
Confidence 8888 8888877643
No 33
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.87 E-value=3.4e-09 Score=113.43 Aligned_cols=71 Identities=27% Similarity=0.357 Sum_probs=48.5
Q ss_pred HHHHHHhCCCCCCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005246 627 LVWKIHEGGKGPNVI-DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLI 699 (706)
Q Consensus 627 Lv~kLle~GadiN~~-D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLl 699 (706)
++++|-..| |+|.+ ...|||+|++|..+|..++|+.||+.|+|||.+|-+|.|+||+||.+||.+|| +||+
T Consensus 322 vV~~LF~mg-nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEiv-klLL 393 (452)
T KOG0514|consen 322 VVERLFKMG-DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIV-KLLL 393 (452)
T ss_pred HHHHHHhcc-CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHH-HHHh
Confidence 344444333 56665 34577777777777777777777777777777777777777777777777777 4444
No 34
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.86 E-value=1.1e-08 Score=103.85 Aligned_cols=80 Identities=19% Similarity=0.165 Sum_probs=69.3
Q ss_pred HHHHHHHHhCCCCCCccC-CCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH--cCCHHHHHHHH
Q 005246 625 EWLVWKIHEGGKGPNVID-DGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTALHWASY--FGRLGCYLEVL 698 (706)
Q Consensus 625 e~Lv~kLle~GadiN~~D-~~G~TpLHlAA~l---G~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~--~Gh~eiVa~LL 698 (706)
..+++.|++.|+++|.++ ..|+||||+|+.. ++.+++++|+.+|+++|.+|..|.||||+|+. .++.+++ ++|
T Consensus 66 ~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv-~~L 144 (209)
T PHA02859 66 VEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVI-KLL 144 (209)
T ss_pred HHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHH-HHH
Confidence 356777888999999997 5899999998764 47899999999999999999999999999986 4789998 888
Q ss_pred HHcCCCC
Q 005246 699 IKFLIYI 705 (706)
Q Consensus 699 le~~~~i 705 (706)
++.++.|
T Consensus 145 i~~gadi 151 (209)
T PHA02859 145 IDSGVSF 151 (209)
T ss_pred HHcCCCc
Confidence 8887654
No 35
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.84 E-value=9.8e-09 Score=120.96 Aligned_cols=85 Identities=26% Similarity=0.308 Sum_probs=74.8
Q ss_pred HHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 005246 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGC 693 (706)
Q Consensus 614 LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~ei 693 (706)
|++.+..+.. ..++.|++.|+++|.+|..|+||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.++
T Consensus 86 L~~aa~~G~~--~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 86 LCQLAASGDA--VGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHcCCH--HHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 4444444333 35778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHc
Q 005246 694 YLEVLIKF 701 (706)
Q Consensus 694 Va~LLle~ 701 (706)
+ ++|+++
T Consensus 164 v-~~Ll~~ 170 (664)
T PTZ00322 164 V-QLLSRH 170 (664)
T ss_pred H-HHHHhC
Confidence 9 777766
No 36
>PHA02730 ankyrin-like protein; Provisional
Probab=98.83 E-value=9.1e-09 Score=120.02 Aligned_cols=77 Identities=19% Similarity=0.079 Sum_probs=64.7
Q ss_pred HHHHHHHHhCCCCCC-ccCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC--CHHHHHHHH
Q 005246 625 EWLVWKIHEGGKGPN-VIDDGGQGVVHLAAALG---YEWAMRPIIATGVSPNFRDARGRTALHWASYFG--RLGCYLEVL 698 (706)
Q Consensus 625 e~Lv~kLle~GadiN-~~D~~G~TpLHlAA~lG---~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~G--h~eiVa~LL 698 (706)
.-+++..++..+++| .+|..|+||||+|+..| +.++|++|+++||+++.+|..|+||||+|+..| +.++| ++|
T Consensus 20 ~~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv-~~L 98 (672)
T PHA02730 20 YKKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIV-HLL 98 (672)
T ss_pred HHHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHH-HHH
Confidence 334455556666788 78889999999999987 489999999999999999999999999999976 79998 888
Q ss_pred HHcC
Q 005246 699 IKFL 702 (706)
Q Consensus 699 le~~ 702 (706)
++.+
T Consensus 99 l~~~ 102 (672)
T PHA02730 99 ISSY 102 (672)
T ss_pred HhcC
Confidence 8774
No 37
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.82 E-value=1.3e-08 Score=113.31 Aligned_cols=89 Identities=21% Similarity=0.326 Sum_probs=74.2
Q ss_pred HHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 005246 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGC 693 (706)
Q Consensus 614 LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~ei 693 (706)
.|+.++...-. .+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++
T Consensus 127 ~Lh~A~~~~~~-~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~i 205 (434)
T PHA02874 127 FLHYAIKKGDL-ESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYAC 205 (434)
T ss_pred HHHHHHHCCCH-HHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 34444433322 34667788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCC
Q 005246 694 YLEVLIKFLIY 704 (706)
Q Consensus 694 Va~LLle~~~~ 704 (706)
| ++|++.++.
T Consensus 206 v-~~Ll~~g~~ 215 (434)
T PHA02874 206 I-KLLIDHGNH 215 (434)
T ss_pred H-HHHHhCCCC
Confidence 8 888877654
No 38
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.81 E-value=1.2e-08 Score=114.94 Aligned_cols=77 Identities=21% Similarity=0.248 Sum_probs=60.8
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAAL-GYEWAMRPIIATGVSPNFRDA-RGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~l-G~~~~V~~LL~~GadvN~rD~-~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
-+++.|++.|++++.+|..|+||||+|+.. ++..++++|+..|+++|.++. .|+||||+| .++.+++ ++|++.++
T Consensus 215 ~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v-~~Ll~~ga 291 (477)
T PHA02878 215 PIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKL-KLLLEYGA 291 (477)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHH-HHHHHCCC
Confidence 456677788888888888888888888865 678888888888888888775 788888888 4677887 77877776
Q ss_pred CC
Q 005246 704 YI 705 (706)
Q Consensus 704 ~i 705 (706)
.+
T Consensus 292 di 293 (477)
T PHA02878 292 DI 293 (477)
T ss_pred CC
Confidence 43
No 39
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.81 E-value=1.2e-08 Score=114.28 Aligned_cols=79 Identities=20% Similarity=0.130 Sum_probs=73.4
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 625 e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
..+++.|++.|+++|.+|..|.||||+|+..|+.+++++|+..|++++.+|..|.||||+|+..++.+++ ++|++.++.
T Consensus 230 ~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv-~~Ll~~g~~ 308 (480)
T PHA03100 230 LEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIF-KLLLNNGPS 308 (480)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHH-HHHHhcCCC
Confidence 3467778889999999999999999999999999999999999999999999999999999999999999 888887764
No 40
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.81 E-value=1.4e-08 Score=113.20 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=71.5
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.+++.|++++.++..|+||||+|+..|+.++|++|+..|++++.+|..|.||||+|+..|+.+++ ++|++.++.
T Consensus 106 ~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv-~~Ll~~g~~ 182 (434)
T PHA02874 106 MIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDII-KLLLEKGAY 182 (434)
T ss_pred HHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHH-HHHHHCCCC
Confidence 45667788999999999999999999999999999999999999999999999999999999999998 888887654
No 41
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.81 E-value=8.4e-09 Score=124.93 Aligned_cols=78 Identities=23% Similarity=0.254 Sum_probs=63.4
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
..+.+++.|++++.++..|.||||.||..|+..+|++||.+|++++.+|+.|+||||.||..||.+|+ .||+++++.+
T Consensus 522 ~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~-~LLlk~GA~v 599 (1143)
T KOG4177|consen 522 VAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIA-ELLLKHGASV 599 (1143)
T ss_pred HHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHH-HHHHHcCCCC
Confidence 34556777888888888888888888888888888888888888888888888888888888888887 8888877653
No 42
>PHA02798 ankyrin-like protein; Provisional
Probab=98.80 E-value=1.3e-08 Score=115.45 Aligned_cols=79 Identities=16% Similarity=0.084 Sum_probs=71.6
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC---HHHHHHHH
Q 005246 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG---YEWAMRPIIATGVSPNFRDARGRTALHWASYFGR---LGCYLEVL 698 (706)
Q Consensus 625 e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG---~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh---~eiVa~LL 698 (706)
..+++.|++.|+++|.+|..|+||||+|+..| ..+++++|+.+|++++.+|..|+||||+|+..|+ .++| ++|
T Consensus 89 ~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv-~~L 167 (489)
T PHA02798 89 LDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEII-KLL 167 (489)
T ss_pred HHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHH-HHH
Confidence 45677888899999999999999999999876 6799999999999999999999999999999998 9998 888
Q ss_pred HHcCCC
Q 005246 699 IKFLIY 704 (706)
Q Consensus 699 le~~~~ 704 (706)
++.++.
T Consensus 168 l~~gad 173 (489)
T PHA02798 168 LEKGVD 173 (489)
T ss_pred HHhCCC
Confidence 877654
No 43
>PHA03095 ankyrin-like protein; Provisional
Probab=98.80 E-value=1.4e-08 Score=113.27 Aligned_cols=93 Identities=19% Similarity=0.149 Sum_probs=77.7
Q ss_pred HHHHHHHHHhH--HHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC-CHHHHHHHHHcCCCCcccCCCCCcHHHHHH--
Q 005246 612 DKLIQNLLRNR--LCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG-YEWAMRPIIATGVSPNFRDARGRTALHWAS-- 686 (706)
Q Consensus 612 d~LLe~llk~k--l~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG-~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa-- 686 (706)
...|+.++... -...+++.|++.|+++|.+|..|.||||+|+..| ...++++|+..|+++|.+|..|+||||+|+
T Consensus 48 ~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~ 127 (471)
T PHA03095 48 KTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSG 127 (471)
T ss_pred CCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhC
Confidence 34555555543 2445677888999999999999999999999999 599999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHcCCCC
Q 005246 687 YFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 687 ~~Gh~eiVa~LLle~~~~i 705 (706)
..++.+++ ++|++.++.+
T Consensus 128 ~~~~~~iv-~~Ll~~gad~ 145 (471)
T PHA03095 128 FNINPKVI-RLLLRKGADV 145 (471)
T ss_pred CcCCHHHH-HHHHHcCCCC
Confidence 56788998 8888877643
No 44
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.79 E-value=1.4e-08 Score=115.29 Aligned_cols=70 Identities=16% Similarity=0.098 Sum_probs=64.5
Q ss_pred HhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 632 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 632 le~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
+..|+++|.+|..|+||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.++| ++|++.+
T Consensus 243 l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv-~~LL~~~ 312 (494)
T PHA02989 243 ILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDML-NRILQLK 312 (494)
T ss_pred HHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH-HHHHhcC
Confidence 345799999999999999999999999999999999999999999999999999999999999 6666544
No 45
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.74 E-value=5.8e-08 Score=85.20 Aligned_cols=85 Identities=20% Similarity=0.275 Sum_probs=65.3
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCC-CCCceeeEEEEeCCCc-
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRL- 516 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-h~pG~Vpl~Vt~~n~~- 516 (706)
+.|+.|+|..|+..|||+|+|.|.+|.... ....|.||+.+.....+.+..|.|.+|+ ..+|..++.|..++..
T Consensus 1 P~I~~i~P~~g~~~Ggt~vtI~G~~f~~~~----~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (90)
T cd00603 1 PVITSISPSSGPLSGGTRLTITGSNLGSGS----PRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANV 76 (90)
T ss_pred CeEEEEcCCCCCCCCCeEEEEEEECCCCCC----ceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCccc
Confidence 369999999999999999999999996521 4699999999777777889999999999 5543444555544443
Q ss_pred --ccCceeeeeee
Q 005246 517 --ACSEVREFEYR 527 (706)
Q Consensus 517 --~cSEvreFEYr 527 (706)
..+....|+|.
T Consensus 77 ~~~~~~~~~F~Y~ 89 (90)
T cd00603 77 SARVLSNTTFTYV 89 (90)
T ss_pred cccccCCcceEEe
Confidence 23555668885
No 46
>PHA02798 ankyrin-like protein; Provisional
Probab=98.74 E-value=3.2e-08 Score=112.11 Aligned_cols=71 Identities=13% Similarity=-0.024 Sum_probs=65.5
Q ss_pred HhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 632 HEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 632 le~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
+..++++|.+|..|.||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.+++ .+|++.++
T Consensus 245 l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv-~~lL~~~~ 315 (489)
T PHA02798 245 IFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIF-NSILNKKP 315 (489)
T ss_pred HHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHH-HHHHccCC
Confidence 344799999999999999999999999999999999999999999999999999999999999 67776654
No 47
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.74 E-value=1.4e-08 Score=105.86 Aligned_cols=89 Identities=22% Similarity=0.219 Sum_probs=76.6
Q ss_pred HHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 005246 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGC 693 (706)
Q Consensus 614 LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~ei 693 (706)
.|+-+.++.- ..+++.|+..|+.+|..+...-||||+||++||.++|..|+...+|+|+.+..|.||||+||..|...+
T Consensus 37 plhwaakegh-~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqi 115 (448)
T KOG0195|consen 37 PLHWAAKEGH-VAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQI 115 (448)
T ss_pred hhhhhhhccc-HHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHH
Confidence 3455555433 356888899999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHcCCC
Q 005246 694 YLEVLIKFLIY 704 (706)
Q Consensus 694 Va~LLle~~~~ 704 (706)
. .=|+.+++.
T Consensus 116 a-edli~~ga~ 125 (448)
T KOG0195|consen 116 A-EDLISCGAA 125 (448)
T ss_pred H-HHHHhccce
Confidence 7 666666553
No 48
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.71 E-value=3.9e-08 Score=110.12 Aligned_cols=79 Identities=22% Similarity=0.242 Sum_probs=72.7
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALG--YEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 625 e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG--~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
..+++.|++.|++++..+..|.||||+|+..| ..+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.+
T Consensus 121 ~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv-~~Ll~~g 199 (480)
T PHA03100 121 YSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVI-KFLLDNG 199 (480)
T ss_pred HHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHH-HHHHHcC
Confidence 34677788899999999999999999999999 99999999999999999999999999999999999998 8888876
Q ss_pred CC
Q 005246 703 IY 704 (706)
Q Consensus 703 ~~ 704 (706)
+.
T Consensus 200 a~ 201 (480)
T PHA03100 200 AD 201 (480)
T ss_pred CC
Confidence 54
No 49
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.69 E-value=7.4e-08 Score=106.21 Aligned_cols=75 Identities=21% Similarity=0.182 Sum_probs=37.8
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 628 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN-FRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 628 v~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN-~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
++.|++.|++++..+..+.||||.|+..|+.++|+.|+..|++++ ..+..|+||||+|+..|+.++| ++|++.++
T Consensus 51 v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv-~~Ll~~ga 126 (413)
T PHA02875 51 IKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIM-KLLIARGA 126 (413)
T ss_pred HHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHH-HHHHhCCC
Confidence 344444455444444445555555555555555555555444432 2344555666666666666655 55555443
No 50
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.69 E-value=6.5e-08 Score=84.75 Aligned_cols=84 Identities=25% Similarity=0.293 Sum_probs=67.3
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEe--ecCeeeeccCC-C-CCceeeE-EEEeC
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVL--TDNVIRCQAPS-H-AAGRVPF-YITGS 513 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~--~~GvLrC~~Pp-h-~pG~Vpl-~Vt~~ 513 (706)
+.|+.|+|.+|+..|||+|+|.|.+|.. .....|.|+...+++.+. .+..|+|.+|+ + .++.+++ .|...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-----~~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-----ISVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-----ceEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 4799999999999999999999999865 346778887766777775 57889999999 5 6888888 77777
Q ss_pred CCcccCceeeeeee
Q 005246 514 NRLACSEVREFEYR 527 (706)
Q Consensus 514 n~~~cSEvreFEYr 527 (706)
+...-++...|+|.
T Consensus 77 ~~~~~~~~~~f~y~ 90 (90)
T smart00429 77 NGGVPSSPQPFTYV 90 (90)
T ss_pred CCCccCcccCeEEC
Confidence 66654554567773
No 51
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.67 E-value=6.1e-08 Score=116.85 Aligned_cols=91 Identities=18% Similarity=0.112 Sum_probs=73.1
Q ss_pred HHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC-------------------------------HHHH
Q 005246 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY-------------------------------EWAM 661 (706)
Q Consensus 613 ~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~-------------------------------~~~V 661 (706)
..|+.+.... ...+++.|++.|+++|.+|..|.||||+|+..|+ ..++
T Consensus 560 TpLh~Aa~~g-~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v 638 (823)
T PLN03192 560 TPLHIAASKG-YEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAM 638 (823)
T ss_pred CHHHHHHHcC-hHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHH
Confidence 3445444433 3456778889999999999999999986655554 5566
Q ss_pred HHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 662 RPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 662 ~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
+.|+.+|+++|.+|.+|+||||+|+..|+.++| ++|++.++.+
T Consensus 639 ~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv-~~Ll~~GAdv 681 (823)
T PLN03192 639 KELLKQGLNVDSEDHQGATALQVAMAEDHVDMV-RLLIMNGADV 681 (823)
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH-HHHHHcCCCC
Confidence 678889999999999999999999999999998 8888877643
No 52
>PHA02946 ankyin-like protein; Provisional
Probab=98.67 E-value=6.7e-08 Score=108.88 Aligned_cols=76 Identities=12% Similarity=0.030 Sum_probs=65.7
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH-HHHHHHHHHcC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALG--YEWAMRPIIATGVSPNFRDARGRTALHWASYFGRL-GCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG--~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~-eiVa~LLle~~ 702 (706)
.+++.|++.|++++.+|..|.||||+|+..| ...++++|+ .|+++|.+|..|.||||+|+..++. +++ ++|+..+
T Consensus 189 ~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl-~gadin~~d~~G~TpLh~A~~~~~~~~~~-~~Ll~~g 266 (446)
T PHA02946 189 STISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLL-PSTDVNKQNKFGDSPLTLLIKTLSPAHLI-NKLLSTS 266 (446)
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHhCChHHHH-HHHHhCC
Confidence 3456677889999999999999999999986 678899888 4999999999999999999999985 666 7777765
Q ss_pred C
Q 005246 703 I 703 (706)
Q Consensus 703 ~ 703 (706)
+
T Consensus 267 ~ 267 (446)
T PHA02946 267 N 267 (446)
T ss_pred C
Confidence 4
No 53
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.67 E-value=9.6e-08 Score=85.48 Aligned_cols=87 Identities=21% Similarity=0.281 Sum_probs=68.0
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeee---EEeecCeeeeccCCCCC--ceeeEEEEeCC
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPA---EVLTDNVIRCQAPSHAA--GRVPFYITGSN 514 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpa---e~~~~GvLrC~~Pph~p--G~Vpl~Vt~~n 514 (706)
.|++|.|..||..|||+|+|.|.+|.... +.....|++|+.+-.. .......|.|.+||+.+ +.++|.|..++
T Consensus 2 ~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~--~~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~~ 79 (94)
T cd01180 2 VITEFFPLSGPLEGGTRLTICGSNLGLRK--NDVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVGH 79 (94)
T ss_pred eeEEEeCCCCCCCCCEEEEEEEEcCCCCc--ccceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEECC
Confidence 69999999999999999999999996532 1346889999994322 25677889999999654 78888888877
Q ss_pred Cc-ccCceeeeeeec
Q 005246 515 RL-ACSEVREFEYRE 528 (706)
Q Consensus 515 ~~-~cSEvreFEYr~ 528 (706)
.. .++....|+|.+
T Consensus 80 ~~~~~~~~~~F~Y~~ 94 (94)
T cd01180 80 GSFRTESSEGFSFVD 94 (94)
T ss_pred ceecccccCceEEeC
Confidence 64 456667899864
No 54
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.66 E-value=6.5e-08 Score=109.80 Aligned_cols=76 Identities=16% Similarity=0.155 Sum_probs=41.7
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHc--CCHHHHHHHHHH
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAAL---GYEWAMRPIIATGVSP-NFRDARGRTALHWASYF--GRLGCYLEVLIK 700 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~l---G~~~~V~~LL~~Gadv-N~rD~~G~TPLH~Aa~~--Gh~eiVa~LLle 700 (706)
+++.|++.|+++|.+|..|.||||.|+.. |..+++++|+.+|+++ +.+|..|+||||+|+.. ++.++| ++|++
T Consensus 90 iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv-~~Ll~ 168 (494)
T PHA02989 90 IVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVI-KILLS 168 (494)
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHH-HHHHH
Confidence 34445555666665565666666555433 3455566666666666 45555666666655432 455555 55555
Q ss_pred cCC
Q 005246 701 FLI 703 (706)
Q Consensus 701 ~~~ 703 (706)
.++
T Consensus 169 ~Ga 171 (494)
T PHA02989 169 FGV 171 (494)
T ss_pred cCC
Confidence 444
No 55
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.65 E-value=1e-07 Score=92.52 Aligned_cols=74 Identities=30% Similarity=0.409 Sum_probs=64.2
Q ss_pred HHHHhCCCCCCccCCCCCcHHHHHHHcCC-----HHHHHHHHHcCC---CCcccCCCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 629 WKIHEGGKGPNVIDDGGQGVVHLAAALGY-----EWAMRPIIATGV---SPNFRDARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 629 ~kLle~GadiN~~D~~G~TpLHlAA~lG~-----~~~V~~LL~~Ga---dvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
..++..|++++.++..|.|+||+|+..|+ ..+++.|+..|+ ..+.+|..|+||||||+..|+.+++ .+|++
T Consensus 90 ~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~-~~ll~ 168 (235)
T COG0666 90 KLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIV-ELLLE 168 (235)
T ss_pred HHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHH-HHHHh
Confidence 45667899999999999999999999999 899999999999 5666799999999999999999998 77776
Q ss_pred cCC
Q 005246 701 FLI 703 (706)
Q Consensus 701 ~~~ 703 (706)
.++
T Consensus 169 ~~~ 171 (235)
T COG0666 169 AGA 171 (235)
T ss_pred cCC
Confidence 654
No 56
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.65 E-value=7.6e-08 Score=113.40 Aligned_cols=77 Identities=18% Similarity=0.124 Sum_probs=70.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.+++.|++.|+++|.+|..|.||||+||..|+.++|++|+..|++++..+..|.||||+|+..|+.+++ ++|++.+.
T Consensus 159 ~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~iv-k~Ll~~~~ 235 (682)
T PHA02876 159 LIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTI-KAIIDNRS 235 (682)
T ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHH-HHHHhcCC
Confidence 467788889999999999999999999999999999999999999999999999999999999999998 66665543
No 57
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.62 E-value=8.7e-08 Score=113.64 Aligned_cols=67 Identities=12% Similarity=0.011 Sum_probs=32.6
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHcCC--HHHHHHHHHcCCCCcccCCCCCcHHHHHH---HcCCHHHH
Q 005246 628 VWKIHEGGKGPNVIDDGGQGVVHLAAALGY--EWAMRPIIATGVSPNFRDARGRTALHWAS---YFGRLGCY 694 (706)
Q Consensus 628 v~kLle~GadiN~~D~~G~TpLHlAA~lG~--~~~V~~LL~~GadvN~rD~~G~TPLH~Aa---~~Gh~eiV 694 (706)
++.|++.|+++|.+|..|.||||+|+..|+ .++|++|++.|+++|.+|..|+||||+|+ ..++.+++
T Consensus 195 VklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIv 266 (764)
T PHA02716 195 LEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEIT 266 (764)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHH
Confidence 344444455555555555555555555443 24455555555555555555555555443 23444444
No 58
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.61 E-value=6.5e-08 Score=114.72 Aligned_cols=70 Identities=13% Similarity=0.045 Sum_probs=62.4
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCCHHH-----HHHHHHcCCCCcccCCCCCcHHHHHHHcCCH-----HHHHHHHHHcCC
Q 005246 634 GGKGPNVIDDGGQGVVHLAAALGYEWA-----MRPIIATGVSPNFRDARGRTALHWASYFGRL-----GCYLEVLIKFLI 703 (706)
Q Consensus 634 ~GadiN~~D~~G~TpLHlAA~lG~~~~-----V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~-----eiVa~LLle~~~ 703 (706)
.+.++|..|..|+||||+||..|+..+ +++|+..|+++|.+|.+|+||||+|+..|+. ++| ++|++.++
T Consensus 486 ~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIv-k~LL~~ga 564 (764)
T PHA02716 486 ERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIV-KNILDKRP 564 (764)
T ss_pred hhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHH-HHHHhcCC
Confidence 467889999999999999999998754 5999999999999999999999999999987 898 88887765
Q ss_pred C
Q 005246 704 Y 704 (706)
Q Consensus 704 ~ 704 (706)
.
T Consensus 565 ~ 565 (764)
T PHA02716 565 N 565 (764)
T ss_pred C
Confidence 4
No 59
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.58 E-value=7.6e-08 Score=116.84 Aligned_cols=75 Identities=31% Similarity=0.255 Sum_probs=70.1
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
-+++.|+++|++++.+|+.|+||||.||..|+.+++.+|+.+|+++|..|.+|.||||.|++.|+.+++ ++|...
T Consensus 554 ~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~-k~l~~~ 628 (1143)
T KOG4177|consen 554 DLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVV-KLLKVV 628 (1143)
T ss_pred hHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchh-hHHHhc
Confidence 468889999999999999999999999999999999999999999999999999999999999999999 555543
No 60
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.58 E-value=3.8e-08 Score=99.61 Aligned_cols=77 Identities=22% Similarity=0.266 Sum_probs=60.0
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.++.|++.|+++....+...++|.+|+..||.++|++||.+++|+|.-|-+|-|||-+|++.||.+|| +.|+..+++
T Consensus 175 vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcv-e~Ll~sGAd 251 (296)
T KOG0502|consen 175 VVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCV-ESLLNSGAD 251 (296)
T ss_pred HHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHH-HHHHhcCCC
Confidence 45666777888887778888888888888888888888888888888888888888888888888887 666666655
No 61
>PHA02730 ankyrin-like protein; Provisional
Probab=98.55 E-value=1.6e-07 Score=109.70 Aligned_cols=77 Identities=16% Similarity=0.134 Sum_probs=70.2
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHc--CCHHHHHHHHHHcCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA-RGRTALHWASYF--GRLGCYLEVLIKFLI 703 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~-~G~TPLH~Aa~~--Gh~eiVa~LLle~~~ 703 (706)
+++.|+..|+++|.+|..|+||||+|+..++..++++|+..|+++|.+|. .|.||||+|+.. |+.+++ .+|++.++
T Consensus 444 ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv-~~LLs~ga 522 (672)
T PHA02730 444 VFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLV-DLLLSYHP 522 (672)
T ss_pred HHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHH-HHHHHcCC
Confidence 46778889999999999999999999999999999999999999999997 599999999984 899998 88888776
Q ss_pred C
Q 005246 704 Y 704 (706)
Q Consensus 704 ~ 704 (706)
-
T Consensus 523 ~ 523 (672)
T PHA02730 523 T 523 (672)
T ss_pred C
Confidence 4
No 62
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.55 E-value=9.2e-08 Score=110.86 Aligned_cols=74 Identities=20% Similarity=0.161 Sum_probs=34.6
Q ss_pred HHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHH-cC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 629 WKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIA-TG-VSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 629 ~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~-~G-advN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
..|+..|++++.+++++.||||.||..|...+|+.||. .| ...|..|-.|.||||.|+..||..|+ +||++.++
T Consensus 290 d~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~-qlLl~~GA 365 (929)
T KOG0510|consen 290 DNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVV-QLLLNKGA 365 (929)
T ss_pred HHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHH-HHHHhcCh
Confidence 33444444444444444455555555444444444444 22 22344444444555555544444444 44444443
No 63
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.55 E-value=2e-07 Score=100.01 Aligned_cols=68 Identities=10% Similarity=0.001 Sum_probs=61.8
Q ss_pred HHHHHHhCCCCCCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 005246 627 LVWKIHEGGKGPNVI-DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCY 694 (706)
Q Consensus 627 Lv~kLle~GadiN~~-D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiV 694 (706)
+++.|++.|+++|.. +..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..++..++
T Consensus 85 ivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~ 153 (300)
T PHA02884 85 AAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLA 153 (300)
T ss_pred HHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHH
Confidence 466778899999986 46899999999999999999999999999999999999999999998877764
No 64
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.54 E-value=1.1e-07 Score=91.01 Aligned_cols=61 Identities=20% Similarity=0.201 Sum_probs=54.1
Q ss_pred CccCCCCCcHHHHHHHcCCHH---HHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 639 NVIDDGGQGVVHLAAALGYEW---AMRPIIATGVSPNFRD-ARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 639 N~~D~~G~TpLHlAA~lG~~~---~V~~LL~~GadvN~rD-~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
+.+|..|+||||+||..|... ++++|+..|+++|.+| ..|+||||+|+..|+.+++ .+|++
T Consensus 49 ~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~-~~Ll~ 113 (154)
T PHA02736 49 LEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELA-TWLCN 113 (154)
T ss_pred HHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHH-HHHHh
Confidence 356899999999999999864 6889999999999998 5999999999999999999 66665
No 65
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.53 E-value=2.2e-07 Score=97.19 Aligned_cols=93 Identities=18% Similarity=0.141 Sum_probs=65.6
Q ss_pred chHHHHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHH
Q 005246 609 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF-RDARGRTALHWASY 687 (706)
Q Consensus 609 ~~~d~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~-rD~~G~TPLH~Aa~ 687 (706)
+.+..||+.+-|+.....+ .|+..--++|.+|..|+++|..||..|...+|++||..|+|+|. ++..++||||+||.
T Consensus 11 ~~~~~Lle~i~Kndt~~a~--~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL 88 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAAL--ALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAAL 88 (396)
T ss_pred chhhHHHHHHccCcHHHHH--HHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence 3445566666665554432 23333335777888888888888888888888888888888886 46777888888888
Q ss_pred cCCHHHHHHHHHHcCCC
Q 005246 688 FGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 688 ~Gh~eiVa~LLle~~~~ 704 (706)
.|+.++. .||++.++.
T Consensus 89 SGn~dvc-rllldaGa~ 104 (396)
T KOG1710|consen 89 SGNQDVC-RLLLDAGAR 104 (396)
T ss_pred cCCchHH-HHHHhccCc
Confidence 8888886 777777654
No 66
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.53 E-value=1.4e-07 Score=105.34 Aligned_cols=72 Identities=28% Similarity=0.387 Sum_probs=67.0
Q ss_pred hCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 633 EGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 633 e~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
..|...++++..|.|.||.|+..||..+.++|+.+|.+++.+|.+||||||.||..|+.+++ .||+.+++.+
T Consensus 186 ~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~-elL~~~ga~~ 257 (527)
T KOG0505|consen 186 NAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDAC-ELLVEHGADM 257 (527)
T ss_pred hccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHH-HHHHHhhccc
Confidence 35888888888899999999999999999999999999999999999999999999999998 7999887754
No 67
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.52 E-value=1e-07 Score=106.46 Aligned_cols=91 Identities=27% Similarity=0.324 Sum_probs=78.2
Q ss_pred HHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005246 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLG 692 (706)
Q Consensus 613 ~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~e 692 (706)
.+++.+......+ +..++..|++++..+.+|.|+||-||.-.+..+|++|++.|++||..|..||||||-|+.+||..
T Consensus 43 ~~l~A~~~~d~~e--v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~ 120 (527)
T KOG0505|consen 43 VFLEACSRGDLEE--VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLN 120 (527)
T ss_pred HHHhccccccHHH--HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHH
Confidence 3444444433332 56778889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC
Q 005246 693 CYLEVLIKFLIYIL 706 (706)
Q Consensus 693 iVa~LLle~~~~i~ 706 (706)
++ ..|+..++.++
T Consensus 121 i~-~~li~~gA~~~ 133 (527)
T KOG0505|consen 121 IV-EYLIQHGANLL 133 (527)
T ss_pred HH-HHHHHhhhhhh
Confidence 98 88888877653
No 68
>PHA02917 ankyrin-like protein; Provisional
Probab=98.51 E-value=2.9e-07 Score=108.52 Aligned_cols=78 Identities=18% Similarity=0.139 Sum_probs=71.4
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH-cCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY-FGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~-~Gh~eiVa~LLle~~~~ 704 (706)
..++.|+..|+++|.+|..|+||||+|+..+...++++|+..|+++|.+|..|+||||+|+. .++.+++ .+|+..++.
T Consensus 433 ~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv-~~LL~~ga~ 511 (661)
T PHA02917 433 STINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELL-KMLLCHKPT 511 (661)
T ss_pred HHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHH-HHHHHcCCC
Confidence 35677888999999999999999999999999999999999999999999999999999996 6889998 888877664
No 69
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.51 E-value=1.7e-07 Score=100.69 Aligned_cols=72 Identities=25% Similarity=0.242 Sum_probs=66.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGRLGCYLEVL 698 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~-GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LL 698 (706)
-+++.|+.+|+|+|++|.+|.|+|++||.+||.++|++||+. ++|+...|.+|.|+|++|-..||.+|. .+|
T Consensus 354 d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa-~ml 426 (452)
T KOG0514|consen 354 DMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIA-VML 426 (452)
T ss_pred HHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHH-HHH
Confidence 457889999999999999999999999999999999999985 799999999999999999999999996 444
No 70
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.49 E-value=1.9e-07 Score=91.81 Aligned_cols=76 Identities=18% Similarity=0.092 Sum_probs=67.7
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
-+++.|+..|++++.+...|+||||-||.-...+++.+||.+|+|||+....-+||||.||...+......+|+..
T Consensus 111 div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~d 186 (228)
T KOG0512|consen 111 DIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHD 186 (228)
T ss_pred HHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhc
Confidence 4677788899999999999999999999999999999999999999999999999999999887766554666644
No 71
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.49 E-value=4.3e-07 Score=107.06 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=64.1
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC-CHHHHHHHHHHcCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY-EWAMRPIIATGVSPNFRDARGRTALHWASYFG-RLGCYLEVLIKFLI 703 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~-~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~G-h~eiVa~LLle~~~ 703 (706)
.+++.|++.|++++..+..|.||||+|+..+. ..++++|+..|+++|.+|..|+||||+|+..| +.+++ ++|++.++
T Consensus 389 ~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv-~lLl~~Ga 467 (682)
T PHA02876 389 VIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVI-EMLLDNGA 467 (682)
T ss_pred HHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHH-HHHHHCCC
Confidence 45667777888888888888888888877655 45678888999999999999999999999877 67887 88888876
Q ss_pred CC
Q 005246 704 YI 705 (706)
Q Consensus 704 ~i 705 (706)
.+
T Consensus 468 d~ 469 (682)
T PHA02876 468 DV 469 (682)
T ss_pred CC
Confidence 43
No 72
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.48 E-value=1.3e-07 Score=104.15 Aligned_cols=80 Identities=18% Similarity=0.163 Sum_probs=74.4
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 625 e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
--+++.|++.|+++|.......|||-.||.-|+.++|++|+++|+|++.+|+.|.|-||+||+.||.+|+ ++|++.++.
T Consensus 97 l~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~-qyLle~gAD 175 (615)
T KOG0508|consen 97 LEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIA-QYLLEQGAD 175 (615)
T ss_pred HHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHH-HHHHHhCCC
Confidence 3567888889999998888899999999999999999999999999999999999999999999999998 999998875
Q ss_pred C
Q 005246 705 I 705 (706)
Q Consensus 705 i 705 (706)
+
T Consensus 176 v 176 (615)
T KOG0508|consen 176 V 176 (615)
T ss_pred c
Confidence 4
No 73
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.45 E-value=3.3e-07 Score=106.37 Aligned_cols=77 Identities=27% Similarity=0.282 Sum_probs=67.5
Q ss_pred HHHHHh-CC-CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc---ccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 628 VWKIHE-GG-KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPN---FRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 628 v~kLle-~G-adiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN---~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
+++|++ .| ...|..|..|+||||+|+..||..++++|+..|+..+ .+|.+|.||||+|+.+|+..+| ++|+..+
T Consensus 322 v~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av-~~Li~~G 400 (929)
T KOG0510|consen 322 VERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAV-QKLISHG 400 (929)
T ss_pred HHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHH-HHHHHcC
Confidence 444554 33 4568889999999999999999999999999999987 5699999999999999999999 8888888
Q ss_pred CCC
Q 005246 703 IYI 705 (706)
Q Consensus 703 ~~i 705 (706)
+.|
T Consensus 401 a~I 403 (929)
T KOG0510|consen 401 ADI 403 (929)
T ss_pred Cce
Confidence 876
No 74
>PHA02917 ankyrin-like protein; Provisional
Probab=98.42 E-value=5.7e-07 Score=106.06 Aligned_cols=74 Identities=9% Similarity=0.046 Sum_probs=60.7
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH---HHHHHHc
Q 005246 628 VWKIHEGGKGPNVIDDGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCY---LEVLIKF 701 (706)
Q Consensus 628 v~kLle~GadiN~~D~~G~TpLHlAA~l---G~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiV---a~LLle~ 701 (706)
++.++..|..++..|..|+||||+||.. |+.++|++|+..|++++.+|..|+||||+|+..||.+++ ..+|++.
T Consensus 15 ~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~ 94 (661)
T PHA02917 15 LKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEA 94 (661)
T ss_pred HHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhc
Confidence 3445556788888899999999998666 779999999999999999999999999999999995543 1566543
No 75
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=98.40 E-value=1.8e-06 Score=75.65 Aligned_cols=79 Identities=20% Similarity=0.207 Sum_probs=66.9
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCCCCceeeEEEEeCCCccc
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLAC 518 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph~pG~Vpl~Vt~~n~~~c 518 (706)
+.|..++|.-|.. |++|+|.|+.|.+. .-.|+||+.+++...|++..|.|.+|.+.+|..++.|+..++..
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~~- 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGSA------PGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGAT- 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCCC------CcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCcc-
Confidence 4699999999987 88999999999642 35799999999999999999999999999999999999765543
Q ss_pred Cceeeeee
Q 005246 519 SEVREFEY 526 (706)
Q Consensus 519 SEvreFEY 526 (706)
|....|+|
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 55555654
No 76
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.39 E-value=1.1e-06 Score=98.59 Aligned_cols=94 Identities=28% Similarity=0.346 Sum_probs=80.6
Q ss_pred CCchHHHHHHHHHHhHHHHHHHHHHHhCCCCC--C--ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHH
Q 005246 607 CPNSRDKLIQNLLRNRLCEWLVWKIHEGGKGP--N--VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTAL 682 (706)
Q Consensus 607 ~~~~~d~LLe~llk~kl~e~Lv~kLle~Gadi--N--~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPL 682 (706)
......+|+.+.+.+.+...+ .|+.+|... | .-+.+|+|+||+||..|++.+.++|+..|+|+..+|.+|+|||
T Consensus 621 e~~lgqqLl~A~~~~Dl~t~~--lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l 698 (749)
T KOG0705|consen 621 EEPLGQQLLRAVAAEDLQTAI--LLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTAL 698 (749)
T ss_pred CCchHHHHHHHHHHHHHHHHH--HHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhh
Confidence 366788999999988887554 466666543 3 2366789999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHcCC
Q 005246 683 HWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 683 H~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.||-..|..+|+ .+|+.++|
T Consensus 699 ~yar~a~sqec~-d~llq~gc 718 (749)
T KOG0705|consen 699 FYARQAGSQECI-DVLLQYGC 718 (749)
T ss_pred hhHhhcccHHHH-HHHHHcCC
Confidence 999999999998 88888875
No 77
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.37 E-value=1.4e-06 Score=79.01 Aligned_cols=73 Identities=22% Similarity=0.462 Sum_probs=57.5
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe-eeeeEEeecCeeeeccCCCCC-------ceeeEEE
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNVIRCQAPSHAA-------GRVPFYI 510 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpae~~~~GvLrC~~Pph~p-------G~Vpl~V 510 (706)
++|++|.|.|+|..|||.|+|+|.+|.. .....+.++||+. .++..+.++..++|.+|+... +..++.+
T Consensus 1 P~I~~i~P~~g~~SGGt~itV~G~~Lds---~q~p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~~~~~~~~~~~~~~~~~ 77 (99)
T cd01181 1 PTITRIEPEWSFLSGGTPITVTGTNLNT---VQEPRIRVKYGGVEKTSCKVRNSTLMTCPAPSLALLNRSPEPGERPVEF 77 (99)
T ss_pred CEEEEeccCCCccCCCEEEEEEeeccCc---ccccEEEEEECCceeccceeCCCCEEEeCCCCCcccccccCCCCcCeEE
Confidence 3699999999999999999999999954 3456899999996 346667788899999998332 5566655
Q ss_pred EeCC
Q 005246 511 TGSN 514 (706)
Q Consensus 511 t~~n 514 (706)
..+.
T Consensus 78 ~fd~ 81 (99)
T cd01181 78 GLDG 81 (99)
T ss_pred EEec
Confidence 5543
No 78
>PHA02795 ankyrin-like protein; Provisional
Probab=98.37 E-value=8.9e-07 Score=99.23 Aligned_cols=79 Identities=20% Similarity=-0.048 Sum_probs=65.6
Q ss_pred HHHHHHHhCCCCCCcc------CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005246 626 WLVWKIHEGGKGPNVI------DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLI 699 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~------D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLl 699 (706)
.+++.|+..|++.... +..|.+++|.|+..++.+++++|+..|+++|.+|..|+||||+|+..|+.++| ++|+
T Consensus 163 eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiV-elLL 241 (437)
T PHA02795 163 SVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLV-SWLL 241 (437)
T ss_pred HHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHH-HHHH
Confidence 3455666678743222 13478899999999999999999999999999999999999999999999998 8888
Q ss_pred HcCCCC
Q 005246 700 KFLIYI 705 (706)
Q Consensus 700 e~~~~i 705 (706)
+.++.+
T Consensus 242 ~~GAdI 247 (437)
T PHA02795 242 ENGANV 247 (437)
T ss_pred HCCCCC
Confidence 887754
No 79
>PHA02792 ankyrin-like protein; Provisional
Probab=98.35 E-value=9.3e-07 Score=102.66 Aligned_cols=75 Identities=17% Similarity=-0.050 Sum_probs=34.4
Q ss_pred HHHHHhCCCCCCccCCCC--CcHHHHHHHcCCHH---HHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 628 VWKIHEGGKGPNVIDDGG--QGVVHLAAALGYEW---AMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 628 v~kLle~GadiN~~D~~G--~TpLHlAA~lG~~~---~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
++.|+..|++++.+|..| .||||+|+...... ++++|+..|+++|.+|..|+||||+|+..++.+++ .+|++.+
T Consensus 355 VelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eiv-elLLs~G 433 (631)
T PHA02792 355 VEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLV-EWLIDNG 433 (631)
T ss_pred HHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHH-HHHHHCC
Confidence 344444455555444432 34444443333221 23444455555555555555555555555555554 4444444
Q ss_pred C
Q 005246 703 I 703 (706)
Q Consensus 703 ~ 703 (706)
+
T Consensus 434 A 434 (631)
T PHA02792 434 A 434 (631)
T ss_pred C
Confidence 3
No 80
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.35 E-value=1e-06 Score=85.59 Aligned_cols=75 Identities=28% Similarity=0.323 Sum_probs=67.7
Q ss_pred HHHHHHHhCCC---CCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 626 WLVWKIHEGGK---GPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 626 ~Lv~kLle~Ga---diN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
.+++.|++.|+ ..+.+|..|+||||+|+..|+..++++|+..|++++.++..|.|+|++|+..|+.+++ .+|++.
T Consensus 125 ~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~-~~l~~~ 202 (235)
T COG0666 125 EVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELV-KLLLDK 202 (235)
T ss_pred HHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHH-HHHHhc
Confidence 45777888899 5666699999999999999999999999999999999999999999999999999998 666653
No 81
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.35 E-value=6e-07 Score=93.92 Aligned_cols=66 Identities=26% Similarity=0.265 Sum_probs=59.7
Q ss_pred CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 635 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 635 GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
--+.|.-|..|-+||||||..|+..+|+.|+.+|+.+|..+...-||||+||..||-++|.+||.+
T Consensus 24 ehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~ 89 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSR 89 (448)
T ss_pred ccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHH
Confidence 346778899999999999999999999999999999999999999999999999999999555443
No 82
>PHA02792 ankyrin-like protein; Provisional
Probab=98.32 E-value=1.1e-06 Score=102.19 Aligned_cols=76 Identities=14% Similarity=0.098 Sum_probs=65.4
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH--c-CC-------HHHHHH
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY--F-GR-------LGCYLE 696 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~--~-Gh-------~eiVa~ 696 (706)
+++.++..|+++|.+|..|.||||+|+..++.+++++|+.+|+++|.+|..|.||||+|+. . +. .+++ +
T Consensus 392 IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il-~ 470 (631)
T PHA02792 392 ILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKIL-E 470 (631)
T ss_pred HHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHH-H
Confidence 5667788999999999999999999999999999999999999999999999999999986 2 22 4455 6
Q ss_pred HHHHcCC
Q 005246 697 VLIKFLI 703 (706)
Q Consensus 697 LLle~~~ 703 (706)
+|++.++
T Consensus 471 lLLs~~p 477 (631)
T PHA02792 471 IILSKLP 477 (631)
T ss_pred HHHhcCC
Confidence 6666554
No 83
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.31 E-value=1e-06 Score=89.42 Aligned_cols=71 Identities=21% Similarity=0.156 Sum_probs=65.1
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 634 GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 634 ~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
...-+|..|+.|-|||+|||+.|+..+|++||..|++++..-+...++|++|+..|..+|| .||+.....|
T Consensus 149 ~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV-~lLL~r~vdV 219 (296)
T KOG0502|consen 149 VNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIV-ELLLTREVDV 219 (296)
T ss_pred hhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHH-HHHHhcCCCc
Confidence 4456899999999999999999999999999999999999999999999999999999999 8888776543
No 84
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.31 E-value=4.3e-06 Score=73.94 Aligned_cols=72 Identities=33% Similarity=0.440 Sum_probs=46.9
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 628 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 628 v~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
++.+++.|.+.+.++..|.+|||.|+..+...+++.|+..|++++..+..|.||+|+|+..++.+++ ++|++
T Consensus 23 i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~-~~L~~ 94 (126)
T cd00204 23 VKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVV-KLLLK 94 (126)
T ss_pred HHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHH-HHHHH
Confidence 3444555666566666667777777776666666666666666666666666777777777776666 55544
No 85
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.24 E-value=4.4e-06 Score=99.66 Aligned_cols=97 Identities=19% Similarity=0.132 Sum_probs=72.4
Q ss_pred CchHHHHHHHHHH--hHHHHHHHHHHHhCCCC------CC----ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC
Q 005246 608 PNSRDKLIQNLLR--NRLCEWLVWKIHEGGKG------PN----VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD 675 (706)
Q Consensus 608 ~~~~d~LLe~llk--~kl~e~Lv~kLle~Gad------iN----~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD 675 (706)
....+.+|+.+.+ ....+.++..+...+.+ ++ .....|.||||+||..|+.++|++|+.+|++++.++
T Consensus 79 ~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~ 158 (743)
T TIGR00870 79 GAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARA 158 (743)
T ss_pred CCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCc
Confidence 3345667777766 23344555555544422 11 123569999999999999999999999999999764
Q ss_pred --------------CCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 676 --------------ARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 676 --------------~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
..|.||||+|+..|+.++| ++|++.++.+
T Consensus 159 ~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv-~lLl~~gadi 201 (743)
T TIGR00870 159 CGDFFVKSQGVDSFYHGESPLNAAACLGSPSIV-ALLSEDPADI 201 (743)
T ss_pred CCchhhcCCCCCcccccccHHHHHHHhCCHHHH-HHHhcCCcch
Confidence 3699999999999999999 8888887543
No 86
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.19 E-value=3.7e-06 Score=94.17 Aligned_cols=68 Identities=26% Similarity=0.270 Sum_probs=62.4
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 634 GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 634 ~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
.+..++.+|..|.||||+|+.+|+..+++.|+.+|+++..+++.||+|||-|+..|+.++|..+|.+.
T Consensus 44 ~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~ 111 (560)
T KOG0522|consen 44 VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHL 111 (560)
T ss_pred hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHHh
Confidence 34567889999999999999999999999999999999999999999999999999999997777654
No 87
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.14 E-value=1.9e-06 Score=69.68 Aligned_cols=40 Identities=28% Similarity=0.497 Sum_probs=22.7
Q ss_pred HHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 664 IIATG-VSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 664 LL~~G-advN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
||+.| +++|.+|..|.||||+||.+|+.++| ++|++.++.
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v-~~Ll~~g~d 41 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVV-RLLLQNGAD 41 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHH-HHHHHCT--
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHH-HHHHHCcCC
Confidence 56778 99999999999999999999999999 666677654
No 88
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.11 E-value=8.3e-06 Score=70.52 Aligned_cols=52 Identities=31% Similarity=0.403 Sum_probs=47.7
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 649 VHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 649 LHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
||+||..|+..+++.|+..+.+++. |.||||+|+..|+.+++ ++|++.++.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~-~~Ll~~g~~~ 52 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIV-KLLLENGADI 52 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHH-HHHHHTTTCT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHH-HHHHHhcccc
Confidence 7999999999999999999998887 99999999999999999 8888876643
No 89
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=98.10 E-value=2.1e-05 Score=68.91 Aligned_cols=79 Identities=22% Similarity=0.229 Sum_probs=66.5
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCCCCceeeEEEEeCCCcccC
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLACS 519 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph~pG~Vpl~Vt~~n~~~cS 519 (706)
.|..++|.-|. -|++|+|.|..|.+. .-.|+||+.+++...|++..|.|.+|.+.+|..++.|+..++.. |
T Consensus 2 ~I~~i~P~~g~--pG~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G~~-S 72 (81)
T cd00604 2 LIGSVGPVMGK--PGNTVTISGEGFGST------GGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDGVT-S 72 (81)
T ss_pred eEeeEcCCCCC--CCCEEEEEEECCCCC------ccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCCcc-c
Confidence 58899999887 688999999999652 24699999999999999999999999999999999999755543 6
Q ss_pred ceeeeeee
Q 005246 520 EVREFEYR 527 (706)
Q Consensus 520 EvreFEYr 527 (706)
....|+|.
T Consensus 73 n~~~f~~l 80 (81)
T cd00604 73 NGYNFEVL 80 (81)
T ss_pred CcEeEEEc
Confidence 66668874
No 90
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.07 E-value=1.7e-05 Score=70.12 Aligned_cols=72 Identities=33% Similarity=0.400 Sum_probs=65.3
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVL 698 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LL 698 (706)
.+++.++..|++++..+..|.||+|+|+..++..++++|+..|.+++..|..|.|||++|...++.+++ ++|
T Consensus 54 ~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~L 125 (126)
T cd00204 54 EIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVV-KLL 125 (126)
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHH-HHh
Confidence 456667777888888999999999999999999999999999999999999999999999999999998 554
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.05 E-value=3.2e-06 Score=93.30 Aligned_cols=74 Identities=23% Similarity=0.246 Sum_probs=67.1
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 628 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 628 v~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~-GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
++++.-.|.+++.+|.+.+|+||.||+.|+..++++|+.. +++++.+|+.|+|||.-|..++|.+|+ +||.+..
T Consensus 522 lrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~-k~L~~~~ 596 (622)
T KOG0506|consen 522 LRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVV-KLLEEAQ 596 (622)
T ss_pred HHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHH-HHHHHHh
Confidence 4455566899999999999999999999999999999985 899999999999999999999999998 8887653
No 92
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.01 E-value=2.6e-05 Score=93.16 Aligned_cols=29 Identities=24% Similarity=0.189 Sum_probs=25.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 676 ARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 676 ~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
..|.||||+||..|+.++| ++|++.++.|
T Consensus 126 ~~G~TpLhlAa~~~~~eiV-klLL~~GAdv 154 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIV-KLLLERGASV 154 (743)
T ss_pred CCCCcHHHHHHHhCCHHHH-HHHHhCCCCC
Confidence 5699999999999999999 8888877654
No 93
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.01 E-value=8.4e-06 Score=58.77 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=30.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Q 005246 644 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA 676 (706)
Q Consensus 644 ~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~ 676 (706)
+|.||||+||..|+.+++++|+.+|++++.+|.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999998874
No 94
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.98 E-value=2.2e-05 Score=87.23 Aligned_cols=69 Identities=20% Similarity=0.288 Sum_probs=62.8
Q ss_pred HHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005246 630 KIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVL 698 (706)
Q Consensus 630 kLle~GadiN~~D-~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LL 698 (706)
+|+.-|+++|..+ +.|.||||+||..|..--+++|+-.|+|+++.|.+|.||+.+|-..||-+++.+|+
T Consensus 151 Rll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~ 220 (669)
T KOG0818|consen 151 RLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLV 220 (669)
T ss_pred HHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHH
Confidence 5778899999875 46999999999999999999999999999999999999999999999999974443
No 95
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.97 E-value=3.9e-06 Score=97.44 Aligned_cols=65 Identities=28% Similarity=0.443 Sum_probs=61.1
Q ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 638 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 638 iN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD-~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.|.+|..|+|+||+|+..|...+++.||.+|++++.+| ..||||||=|.++|+.+|+ .||++++.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca-~lLL~~g~ 110 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCA-SLLLSKGR 110 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHH-HHHHhcCC
Confidence 67899999999999999999999999999999999999 5899999999999999998 88888764
No 96
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=97.96 E-value=2.1e-05 Score=82.75 Aligned_cols=88 Identities=22% Similarity=0.226 Sum_probs=76.5
Q ss_pred chHHHHHHHHHHhHHHHHHHHHHHhCCCCCCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 005246 609 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVI-DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 687 (706)
Q Consensus 609 ~~~d~LLe~llk~kl~e~Lv~kLle~GadiN~~-D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~ 687 (706)
+....|.++..+.++ .+++++++.|+|+|.. +..+.||||.||.-|...+.++|+.+|+.+...+.-|+||-..||.
T Consensus 44 sGMs~LahAaykGnl--~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAF 121 (396)
T KOG1710|consen 44 SGMSVLAHAAYKGNL--TLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAF 121 (396)
T ss_pred CcccHHHHHHhcCcH--HHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHH
Confidence 334566777788776 4688899999999954 6779999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHH
Q 005246 688 FGRLGCYLEVLI 699 (706)
Q Consensus 688 ~Gh~eiVa~LLl 699 (706)
-||.+|| .++-
T Consensus 122 VG~H~CV-~iIN 132 (396)
T KOG1710|consen 122 VGHHECV-AIIN 132 (396)
T ss_pred hcchHHH-HHHh
Confidence 9999999 5543
No 97
>PF13606 Ank_3: Ankyrin repeat
Probab=97.91 E-value=1.3e-05 Score=57.13 Aligned_cols=29 Identities=28% Similarity=0.376 Sum_probs=22.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCc
Q 005246 644 GGQGVVHLAAALGYEWAMRPIIATGVSPN 672 (706)
Q Consensus 644 ~G~TpLHlAA~lG~~~~V~~LL~~GadvN 672 (706)
+|+||||+||..|+.++|++|+++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 47778888888787788887777777776
No 98
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=97.80 E-value=1.4e-05 Score=92.65 Aligned_cols=74 Identities=23% Similarity=0.236 Sum_probs=62.8
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
++++++..+..+|.....|.||||+||..||.+++.+|+.+|+++-.++..+.|+|..|+.+|+.++| ++|+..
T Consensus 97 ~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vv-q~ll~~ 170 (854)
T KOG0507|consen 97 IVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVV-QMLLQK 170 (854)
T ss_pred HHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHH-HHHhhh
Confidence 56667777788888888899999999999999999999999999988999999999999999999998 666554
No 99
>PF13606 Ank_3: Ankyrin repeat
Probab=97.72 E-value=3.9e-05 Score=54.65 Aligned_cols=28 Identities=25% Similarity=0.330 Sum_probs=24.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 677 RGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 677 ~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
+|+||||+||..|+.++| ++|++.++.|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v-~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIV-KYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHH-HHHHHcCCCC
Confidence 599999999999999999 8888887654
No 100
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=97.70 E-value=6.4e-05 Score=89.07 Aligned_cols=56 Identities=34% Similarity=0.410 Sum_probs=52.3
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 648 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 648 pLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.||.||..|+..+++.|+..|+++|.+|..|+||||+||..|+.++| ++|++.++.
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv-~~LL~~Gad 140 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVV-RVLLEFGAD 140 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHH-HHHHHCCCC
Confidence 48899999999999999999999999999999999999999999999 888887664
No 101
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=97.64 E-value=7.4e-05 Score=86.86 Aligned_cols=88 Identities=20% Similarity=0.095 Sum_probs=75.7
Q ss_pred HHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005246 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLG 692 (706)
Q Consensus 613 ~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~e 692 (706)
.|-+++++... -+++.|+++.+-++.+|..|.+|||+||..|+.++|+.|+.++..+|+....|.||||.||..||.+
T Consensus 52 alhha~Lng~~--~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~d 129 (854)
T KOG0507|consen 52 LLHHAVLNGQN--QISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLE 129 (854)
T ss_pred HHHHHHhcCch--HHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchH
Confidence 34455565443 4577788888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCC
Q 005246 693 CYLEVLIKFLI 703 (706)
Q Consensus 693 iVa~LLle~~~ 703 (706)
+| .+|+.+++
T Consensus 130 vv-~~Ll~~~a 139 (854)
T KOG0507|consen 130 VV-FYLLKKNA 139 (854)
T ss_pred HH-HHHHhcCC
Confidence 99 77776653
No 102
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=97.56 E-value=8.6e-05 Score=53.48 Aligned_cols=28 Identities=32% Similarity=0.403 Sum_probs=25.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 677 RGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 677 ~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
+|+||||+|+..|+.++| ++|++.++.|
T Consensus 1 dG~TpLh~A~~~~~~~~v-~~Ll~~ga~~ 28 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIV-KLLLKHGADI 28 (33)
T ss_dssp TSBBHHHHHHHTTCHHHH-HHHHHTTSCT
T ss_pred CcccHHHHHHHHHHHHHH-HHHHHCcCCC
Confidence 599999999999999999 8888887764
No 103
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=97.53 E-value=0.00012 Score=58.17 Aligned_cols=40 Identities=25% Similarity=0.249 Sum_probs=30.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPII 665 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL 665 (706)
.+++.|++.|.++|.+|.+|+||||+|+..|+..++++|+
T Consensus 15 ~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 15 EIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp HHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 3466677789999999999999999999999999999986
No 104
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.48 E-value=0.0002 Score=71.77 Aligned_cols=66 Identities=20% Similarity=0.080 Sum_probs=61.8
Q ss_pred CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 635 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 635 GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~G-advN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
+.++|.+|..|+|+|++||..|..++|.+|+.+| +.|..+|..|.+++.+|-..|+.++| .+|.+.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fv-h~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFV-HSLFEN 68 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHH-HHHHHH
Confidence 4689999999999999999999999999999999 89999999999999999999999998 777654
No 105
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.47 E-value=0.00026 Score=83.19 Aligned_cols=58 Identities=24% Similarity=0.323 Sum_probs=39.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 645 GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 645 G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
|..||-+||..+..+++++|+++|||++++|.+|+|.||..+..-..+|- .++++.++
T Consensus 240 GEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My-~~~L~~ga 297 (782)
T KOG3676|consen 240 GEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMY-DLALELGA 297 (782)
T ss_pred ccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHH-HHHHhcCC
Confidence 45677777777777777777777777777777777777777666555664 55555544
No 106
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.42 E-value=0.00029 Score=82.80 Aligned_cols=76 Identities=21% Similarity=0.301 Sum_probs=67.9
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS--PNFRDARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 625 e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~Gad--vN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
.-+++.|++.|+|++.+|..|.|.||+....-..++-..++..|++ ...++++|-|||.+||.-|+.+|-+.+|-+
T Consensus 253 ~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 253 PEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 4567788889999999999999999999999888888999999999 889999999999999999999998555443
No 107
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=97.38 E-value=0.00035 Score=62.87 Aligned_cols=59 Identities=12% Similarity=0.048 Sum_probs=52.2
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHW 684 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~ 684 (706)
.+++.|+..|++++.+|+.|.|||.-|...||..+|++||..|++-..+..+|.+.+..
T Consensus 48 ~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~ea 106 (117)
T KOG4214|consen 48 SILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEA 106 (117)
T ss_pred HHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhh
Confidence 35566667799999999999999999999999999999999999999999999776553
No 108
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.17 E-value=0.00019 Score=85.87 Aligned_cols=79 Identities=19% Similarity=0.068 Sum_probs=68.0
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 624 CEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF-RDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 624 ~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~-rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
++.++++|+..|+++..+|+.|-+||.+|+-.||..+|+.|+.+.+++.+ .|+.+.|+|.+||..|+.++| .||+..+
T Consensus 769 h~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vv-elLl~~g 847 (2131)
T KOG4369|consen 769 HREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVV-ELLLNAG 847 (2131)
T ss_pred cHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHH-HHHHHhh
Confidence 45567778888999999999999999999999999999999999999887 478999999999999999998 7777654
Q ss_pred C
Q 005246 703 I 703 (706)
Q Consensus 703 ~ 703 (706)
+
T Consensus 848 a 848 (2131)
T KOG4369|consen 848 A 848 (2131)
T ss_pred c
Confidence 3
No 109
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.11 E-value=0.00074 Score=73.50 Aligned_cols=57 Identities=25% Similarity=0.182 Sum_probs=41.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 646 QGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 646 ~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
..-|-.||+.|..+.|+.|++.|++||.+|+....||.+|+.+||+.+| +||++.++
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vv-klLLenGA 93 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVV-KLLLENGA 93 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHH-HHHHHcCC
Confidence 3446667777777777777777777777777777777777777777776 77776654
No 110
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=96.98 E-value=0.00086 Score=75.47 Aligned_cols=74 Identities=20% Similarity=0.105 Sum_probs=61.1
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHH--HcCCHHHHHHHHH
Q 005246 625 EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWAS--YFGRLGCYLEVLI 699 (706)
Q Consensus 625 e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD-~~G~TPLH~Aa--~~Gh~eiVa~LLl 699 (706)
--+++.|++.|+++|..|.+||||||+||......+++.|+..|+-|-+.. .++.||..-+- .-|..+|. ++|.
T Consensus 596 yeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~Cs-qyL~ 672 (752)
T KOG0515|consen 596 YEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCS-QYLY 672 (752)
T ss_pred hHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHH-HHHH
Confidence 357888999999999999999999999999999999999999999887654 57778866543 34777786 5554
No 111
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=96.78 E-value=0.0061 Score=55.76 Aligned_cols=82 Identities=21% Similarity=0.224 Sum_probs=67.4
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCC-------eeeeeEEe----ecCeeeeccCC-CC-----
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE-------IEVPAEVL----TDNVIRCQAPS-HA----- 502 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd-------~eVpae~~----~~GvLrC~~Pp-h~----- 502 (706)
.|.+++-.-++..||.+|.++|..+.- ....|.|++ .|+-|.+- ....|+|.+|| |.
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~k------~dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~ 75 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVNK------PDIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR 75 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCCC------CCCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence 488999999999999999999997632 268899999 67767663 66779999999 54
Q ss_pred CceeeEEEEeCCCcccCceeeeeee
Q 005246 503 AGRVPFYITGSNRLACSEVREFEYR 527 (706)
Q Consensus 503 pG~Vpl~Vt~~n~~~cSEvreFEYr 527 (706)
|=.|+|++.......+|+...|+|.
T Consensus 76 pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 76 PVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred cEEEEEEEEeCCCCeecCCcCeEEc
Confidence 4578888888877889999999995
No 112
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=96.59 E-value=0.0037 Score=70.82 Aligned_cols=92 Identities=21% Similarity=0.230 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCcHHHHHHH
Q 005246 610 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS--PNFRDARGRTALHWASY 687 (706)
Q Consensus 610 ~~d~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~Gad--vN~rD~~G~TPLH~Aa~ 687 (706)
..+.+|+.++...++.. .+ ....|.++-.++.+..+.||+|+..|..++|+++|.+|.. ++..|..|.|+||-||.
T Consensus 866 iseeil~av~~~D~~kl-qE-~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~ 943 (1004)
T KOG0782|consen 866 ISEEILRAVLSSDLMKL-QE-THLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAAC 943 (1004)
T ss_pred ccHHHHHHHHhccHHHH-HH-HHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH
Confidence 45667888888776532 22 2335666777899999999999999999999999999865 56778999999999998
Q ss_pred cCCHHHHHHHHHHcCCC
Q 005246 688 FGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 688 ~Gh~eiVa~LLle~~~~ 704 (706)
.++-.+. .||++.++-
T Consensus 944 ~~~r~vc-~~lvdagas 959 (1004)
T KOG0782|consen 944 QRNRAVC-QLLVDAGAS 959 (1004)
T ss_pred hcchHHH-HHHHhcchh
Confidence 8888776 888887653
No 113
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=96.42 E-value=0.0092 Score=72.21 Aligned_cols=73 Identities=22% Similarity=0.215 Sum_probs=38.1
Q ss_pred HHHHHHhCCCCCCcc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 627 LVWKIHEGGKGPNVI--DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 627 Lv~kLle~GadiN~~--D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD-~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
+++.|+..|+.||.+ .+.|..||++|+..||..+++.||..|-++|+.- .+-+|+|-+|+..|+.++| .||+.
T Consensus 872 iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv-~lLLa 947 (2131)
T KOG4369|consen 872 IIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVV-FLLLA 947 (2131)
T ss_pred HHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHH-HHHHH
Confidence 444555555555544 3345555555555555555555555555555532 3445555555555555555 44443
No 114
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=96.21 E-value=0.0059 Score=72.03 Aligned_cols=64 Identities=25% Similarity=0.359 Sum_probs=56.4
Q ss_pred HhHHHHHHHHHHHhCCCCCCccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Q 005246 620 RNRLCEWLVWKIHEGGKGPNVIDDG-GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 687 (706)
Q Consensus 620 k~kl~e~Lv~kLle~GadiN~~D~~-G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~ 687 (706)
++.+.+||+. +|++++++|+. |+||||-|...|+.+++-.||..|+....+|+.|..||.+-++
T Consensus 64 k~~~l~wLlq----hGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 64 KNSFLRWLLQ----HGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred hhHHHHHHHh----cCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHhh
Confidence 3444556655 59999999875 9999999999999999999999999999999999999998876
No 115
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=96.16 E-value=0.0036 Score=69.97 Aligned_cols=62 Identities=26% Similarity=0.151 Sum_probs=54.9
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 641 IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 641 ~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
++.++.-.+++||..|...+++.+.-.|.|++.+|.+.+|+||.||..||+++|+.||-.++
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~k 563 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACK 563 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHc
Confidence 45567888999999999999999999999999999999999999999999999955555544
No 116
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.14 E-value=0.0044 Score=74.60 Aligned_cols=68 Identities=24% Similarity=0.250 Sum_probs=61.7
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCY 694 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiV 694 (706)
+.+.|+..|+++|.+|..|++|||.+...|+...+..|+.+|++.++.|..|.+||++|....+.+++
T Consensus 671 ~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~ 738 (785)
T KOG0521|consen 671 AVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAANADIV 738 (785)
T ss_pred HHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhccccHH
Confidence 45667788999999999999999999999999999999999999999999999999999887887776
No 117
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=96.08 E-value=0.0027 Score=76.60 Aligned_cols=70 Identities=27% Similarity=0.293 Sum_probs=59.0
Q ss_pred HHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------CcccCCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 631 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS------PNFRDARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 631 Lle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~Gad------vN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
+...|..++.+|..||||||||+..|+..++..|++.|++ +......|.|+--.|...||..+. .+|.+.
T Consensus 627 ~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia-~~lse~ 702 (975)
T KOG0520|consen 627 ISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIA-GYLSEK 702 (975)
T ss_pred EeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchH-HHHhhh
Confidence 3346778899999999999999999999999999988865 444557899999999999999996 666543
No 118
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=95.86 E-value=0.035 Score=50.73 Aligned_cols=82 Identities=21% Similarity=0.287 Sum_probs=60.1
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe--------eeeeEE----eecCeeeeccCC-CC--
Q 005246 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--------EVPAEV----LTDNVIRCQAPS-HA-- 502 (706)
Q Consensus 438 lfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~--------eVpae~----~~~GvLrC~~Pp-h~-- 502 (706)
++.|.+.|-.-+++.||-||+++|..+.- .-.|.|-+. |+-|++ +....|+|.+|| |.
T Consensus 1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~k-------DikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~ 73 (101)
T cd01178 1 LPEIEKKSLNSCSVNGGEELFLTGKNFLK-------DSKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKH 73 (101)
T ss_pred CCeeEEeccCceeecCCCEEEEEehhcCC-------CCEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCC
Confidence 45799999999999999999999996632 235666531 333433 566789999999 44
Q ss_pred ---CceeeEEEEeCCCcccCceeeeeee
Q 005246 503 ---AGRVPFYITGSNRLACSEVREFEYR 527 (706)
Q Consensus 503 ---pG~Vpl~Vt~~n~~~cSEvreFEYr 527 (706)
|=.|-|++.... ..+|+...|+|.
T Consensus 74 I~~pV~V~~~l~~~~-~~~S~~~~FtY~ 100 (101)
T cd01178 74 VAAPVQVQFYVVNGK-RKRSQPQTFTYT 100 (101)
T ss_pred cCCceEEEEEEEcCC-CCcCCCCCcEec
Confidence 556667776543 457999999995
No 119
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=95.83 E-value=0.022 Score=69.79 Aligned_cols=94 Identities=21% Similarity=0.195 Sum_probs=77.3
Q ss_pred ccccCceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe-eeeeEEeecCe-eeeccCC-CCCceeeEE
Q 005246 433 LSQEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNV-IRCQAPS-HAAGRVPFY 509 (706)
Q Consensus 433 ~~q~qlfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpae~~~~Gv-LrC~~Pp-h~pG~Vpl~ 509 (706)
..--|.+.|..+.|.||+..|||.|+++|+.+.. .+.-.|++|+. .-+....+++. |+|.+++ -.++.-|+.
T Consensus 137 ~~s~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~-----gs~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~~~~~ 211 (1025)
T KOG3610|consen 137 GSSLQGPCFLSAEPVNGPASGGTQVHCTGSPLDT-----GSCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSEAPVL 211 (1025)
T ss_pred ceeecceeEEeeccCcCCCCCCcceEEecccccc-----CCCceEEecCCccceeEeecCceEEEEecCCCCCCCccceE
Confidence 3345778999999999999999999999998854 36799999999 77777888887 9999999 456889999
Q ss_pred EEeCCCcccCceeeeeeecCCC
Q 005246 510 ITGSNRLACSEVREFEYREKPS 531 (706)
Q Consensus 510 Vt~~n~~~cSEvreFEYr~~~~ 531 (706)
|..+....-...-.|+|...+.
T Consensus 212 v~f~~~~~~~~~~~f~y~~dps 233 (1025)
T KOG3610|consen 212 VSFDRTPQKLTPLAFNYTADPS 233 (1025)
T ss_pred EEecccccccCCCCcccccCCc
Confidence 9998876544467788886654
No 120
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=95.64 E-value=0.043 Score=48.99 Aligned_cols=66 Identities=15% Similarity=0.299 Sum_probs=53.3
Q ss_pred eEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCC-----------CCceeeEEEEeCCCcccCceee
Q 005246 455 TKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-----------AAGRVPFYITGSNRLACSEVRE 523 (706)
Q Consensus 455 tKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph-----------~pG~Vpl~Vt~~n~~~cSEvre 523 (706)
.-+-++|.+|.. ++.|.|||+++-+.+-..-.|.|.+|+- .|..||+.+.-..+..-+.-..
T Consensus 20 amlEl~GenF~p-------nLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENFTP-------NLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcCCC-------CceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 567788998854 8999999999999999999999999982 5677888877777666566667
Q ss_pred eeee
Q 005246 524 FEYR 527 (706)
Q Consensus 524 FEYr 527 (706)
|+|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 7774
No 121
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=95.27 E-value=0.029 Score=63.27 Aligned_cols=66 Identities=23% Similarity=0.237 Sum_probs=56.8
Q ss_pred CccCCCCCcH------HHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 639 NVIDDGGQGV------VHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 639 N~~D~~G~Tp------LHlAA~lG~~~~V~~LL~~GadvN~rD-~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
..+|.+|.+. ||..+..|+.+..-.||..|+++|+-+ ..|.||||.||+.|..--| .||+-+++.+
T Consensus 121 ~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~-ElL~vYGAD~ 193 (669)
T KOG0818|consen 121 PCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQA-ELLAVYGADP 193 (669)
T ss_pred CCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhh-hHHhhccCCC
Confidence 3466676655 888999999999888999999999977 6899999999999999997 9999888765
No 122
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=94.92 E-value=0.015 Score=70.19 Aligned_cols=60 Identities=28% Similarity=0.317 Sum_probs=55.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 643 DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 643 ~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
..|.|+||.|+..|-..++++|+..|+++|.+|..|.||||.+...|+...+ .+|++.++
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~-~~ll~~~a 713 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIA-CLLLKRGA 713 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchh-hhhccccc
Confidence 4579999999999999999999999999999999999999999999999997 77776543
No 123
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=94.90 E-value=0.085 Score=48.31 Aligned_cols=82 Identities=17% Similarity=0.132 Sum_probs=59.2
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe-------eee-----eEEeecCeeeeccCC-CCC---
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-------EVP-----AEVLTDNVIRCQAPS-HAA--- 503 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-------eVp-----ae~~~~GvLrC~~Pp-h~p--- 503 (706)
.|.+++=.-|++.||.||.+++....- -...|.|-+. |.- +.+...-.|++.+|| |.+
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~K------~dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~ 75 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQK------EDIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT 75 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccCC------CCCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence 699999999999999999999986531 1355666542 333 333445668999999 654
Q ss_pred --ceeeEEEEeCCCcccCceeeeeee
Q 005246 504 --GRVPFYITGSNRLACSEVREFEYR 527 (706)
Q Consensus 504 --G~Vpl~Vt~~n~~~cSEvreFEYr 527 (706)
=.|-+++.-.....+|+...|+|.
T Consensus 76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 76 EPVKVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred CceEEEEEEEeCCCCCccCCcceEEc
Confidence 455566666556668999999995
No 124
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.20 E-value=0.083 Score=33.77 Aligned_cols=27 Identities=26% Similarity=0.359 Sum_probs=13.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC
Q 005246 645 GQGVVHLAAALGYEWAMRPIIATGVSP 671 (706)
Q Consensus 645 G~TpLHlAA~lG~~~~V~~LL~~Gadv 671 (706)
|.|+||+|+..+...+++.|+..|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 445555555555555555555554443
No 125
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.00 E-value=0.091 Score=33.57 Aligned_cols=26 Identities=35% Similarity=0.406 Sum_probs=22.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 677 RGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 677 ~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.|+||||+|+..|+.+++ .+|++.+.
T Consensus 1 ~~~~~l~~~~~~~~~~~~-~~ll~~~~ 26 (30)
T smart00248 1 DGRTPLHLAAENGNLEVV-KLLLDKGA 26 (30)
T ss_pred CCCCHHHHHHHcCCHHHH-HHHHHcCC
Confidence 488999999999999999 66666654
No 126
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=93.89 E-value=0.099 Score=59.77 Aligned_cols=85 Identities=20% Similarity=0.201 Sum_probs=67.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHhCCCC--CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC
Q 005246 613 KLIQNLLRNRLCEWLVWKIHEGGKG--PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 690 (706)
Q Consensus 613 ~LLe~llk~kl~e~Lv~kLle~Gad--iN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh 690 (706)
.||+.+.+..-. .+++-++++|.. +++.|+.|.|+||-||..+...++.+|+.+|+.+...|..|.||-.-|-..|.
T Consensus 901 sllh~a~~tg~~-eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d 979 (1004)
T KOG0782|consen 901 SLLHYAAKTGNG-EIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGD 979 (1004)
T ss_pred hHHHHHHhcCCh-HHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCC
Confidence 345555543322 245556666643 45678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 005246 691 LGCYLEVLI 699 (706)
Q Consensus 691 ~eiVa~LLl 699 (706)
.+.+ ..|.
T Consensus 980 ~dla-ayle 987 (1004)
T KOG0782|consen 980 PDLA-AYLE 987 (1004)
T ss_pred chHH-HHHh
Confidence 9997 5554
No 127
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=93.87 E-value=0.07 Score=60.39 Aligned_cols=61 Identities=23% Similarity=0.241 Sum_probs=50.3
Q ss_pred HHHHHHHhCCCCCCc------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH
Q 005246 626 WLVWKIHEGGKGPNV------IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWAS 686 (706)
Q Consensus 626 ~Lv~kLle~GadiN~------~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa 686 (706)
..++.|.+++.+.|. .+..-.|+||+||..|...+|..||..|+|+..+|..|.||..+++
T Consensus 405 ~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 405 DSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 344555556665553 2455789999999999999999999999999999999999999887
No 128
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=93.77 E-value=0.14 Score=56.42 Aligned_cols=84 Identities=17% Similarity=0.167 Sum_probs=59.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 005246 612 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRL 691 (706)
Q Consensus 612 d~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~ 691 (706)
..|++++-...+ --++.|++.|.++|..|.....||.+|+..||..+|++||.+||-...-.-.| .--|+++...
T Consensus 38 ~elceacR~GD~--d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G-~RC~YgaLnd-- 112 (516)
T KOG0511|consen 38 GELCEACRAGDV--DRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDG-DRCHYGALND-- 112 (516)
T ss_pred HHHHHHhhcccH--HHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCc-chhhhhhhhH--
Confidence 344454444333 23567778999999999999999999999999999999999999665333444 3446666543
Q ss_pred HHHHHHHHHc
Q 005246 692 GCYLEVLIKF 701 (706)
Q Consensus 692 eiVa~LLle~ 701 (706)
.|+..|+.+
T Consensus 113 -~IR~mllsy 121 (516)
T KOG0511|consen 113 -RIRRMLLSY 121 (516)
T ss_pred -HHHHHHHHH
Confidence 334445443
No 129
>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function.
Probab=91.65 E-value=0.39 Score=56.51 Aligned_cols=103 Identities=22% Similarity=0.415 Sum_probs=67.3
Q ss_pred CChHHHHHHHHccccc-----ccccCCCCCCCCCceEe-ee--hhhhhhhhccCcceeecCCCcchhhhhhhhccCCEee
Q 005246 27 LRPTEICEILRNYQKF-----HLTPDPPVRPPAGSLFL-FD--RKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSIDV 98 (706)
Q Consensus 27 l~~~ei~~il~~~~~~-----~~~~~~~~~p~~gs~~l-~~--r~~~~~frkdg~~w~kkk~g~~~~e~h~~lkv~~~~~ 98 (706)
|..++|+++|..--+. .+.-.=..+|+-||||| |- -++.-.|-.|||.|.- -|.--+..|+|..+
T Consensus 30 l~~~~~~~~Ll~ap~i~r~~~P~~WtylD~P~DGtv~L~wqp~~~lg~~fasDGy~wad-------~E~~y~~~~~G~~l 102 (669)
T PF08549_consen 30 LPPETVVEYLLKAPQIARDTAPFFWTYLDKPPDGTVLLTWQPLNRLGTNFASDGYVWAD-------PEQAYTHEVNGYTL 102 (669)
T ss_pred CCHHHHHHHHHhchhhhccCCCeEeecccCCCCCcEEEEecCchhcCCcCCCCcceecC-------hhheeeecCCCeEE
Confidence 5566777777554322 11111246799999987 42 2445779999999964 24444555666553
Q ss_pred EEE------EeecccCCCcccceeeeeccCCC---------cceEEEeeecccc
Q 005246 99 LHC------YYAHGEDNENFQRRSYWMLDGQL---------EHIVLVHYREVKE 137 (706)
Q Consensus 99 ~~~------~y~h~~~~~~f~rr~yw~l~~~~---------~~ivlvhy~~~~~ 137 (706)
-. |+-=+|.....-||.|-|+-... +..+||||-.-..
T Consensus 103 -Ei~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY~~a~~ 155 (669)
T PF08549_consen 103 -EIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHYGPAPP 155 (669)
T ss_pred -EEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEecCCCc
Confidence 22 33326788899999999996543 5689999987665
No 130
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=91.57 E-value=0.18 Score=60.39 Aligned_cols=69 Identities=17% Similarity=0.052 Sum_probs=45.5
Q ss_pred CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC--------------------------CCC----------cccCCCCC
Q 005246 636 KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG--------------------------VSP----------NFRDARGR 679 (706)
Q Consensus 636 adiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~G--------------------------adv----------N~rD~~G~ 679 (706)
.++|.+|.-|+++||+|...-+.+++++|+..+ ... ...-..+.
T Consensus 53 lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~di 132 (822)
T KOG3609|consen 53 LNINCRDPLGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDI 132 (822)
T ss_pred cchhccChHhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCc
Confidence 355666666666666666666655555555542 111 12234567
Q ss_pred cHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 680 TALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 680 TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
|||++||..++.+|+ ++|++.++.|
T Consensus 133 tPliLAAh~NnyEil-~~Ll~kg~~i 157 (822)
T KOG3609|consen 133 TPLMLAAHLNNFEIL-QCLLTRGHCI 157 (822)
T ss_pred cHHHHHHHhcchHHH-HHHHHcCCCC
Confidence 999999999999999 8888776654
No 131
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=90.55 E-value=0.29 Score=56.03 Aligned_cols=57 Identities=21% Similarity=0.258 Sum_probs=43.2
Q ss_pred cHHHHHHHcCCHHHHHH-HH-HcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 647 GVVHLAAALGYEWAMRP-II-ATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 647 TpLHlAA~lG~~~~V~~-LL-~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
-|||++.......-... |. ..+..++.+|..|.||||+|+.-||..++ ++|+..++.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a-~~Ll~a~Ad 80 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAA-RILLSAGAD 80 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHH-HHHHhcCCC
Confidence 45899887665544433 33 34567889999999999999999999998 777766653
No 132
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=82.73 E-value=1.7 Score=50.35 Aligned_cols=58 Identities=28% Similarity=0.279 Sum_probs=41.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 645 GQGVVHLAAALGYEWAMRPIIATGVS----PNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 645 G~TpLHlAA~lG~~~~V~~LL~~Gad----vN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
|+-.| -|........+-+||++|.. -..-+.+|+||||+||..|++.+. +||+=+++.
T Consensus 625 gqqLl-~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~-QLLiWyg~d 686 (749)
T KOG0705|consen 625 GQQLL-RAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLA-QLLIWYGVD 686 (749)
T ss_pred HHHHH-HHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHH-HHHHHhCcc
Confidence 44333 34444455666788888843 334678889999999999999996 999866553
No 133
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=82.36 E-value=0.32 Score=56.50 Aligned_cols=80 Identities=16% Similarity=0.206 Sum_probs=62.0
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCC-CCCceeeEEEEeCCCc--
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRL-- 516 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-h~pG~Vpl~Vt~~n~~-- 516 (706)
+|.|+.|-.+...++++|+.+|..+++ ....+.+|..+...-++|| ..+|.|-|.|+...-.
T Consensus 244 vprd~~~~Q~~i~~~~~v~~~g~n~~~---------------~als~~~~~~s~~~~~l~~~d~~~~v~~~i~~~~~~~~ 308 (605)
T KOG3836|consen 244 VPRDMRRFQVLINGGVEVTLLGANFKD---------------IALSTQCSEESTMVNYLPPSDNPGSVSVSITDPSETSD 308 (605)
T ss_pred Cccccccccccccccceecccccchhh---------------hhhcccccccccceeeccccccCCCceeeecccccccc
Confidence 689999999999999999999998854 3345667888999999988 9999999999853222
Q ss_pred ----------ccCceeeeeeecCCCCCC
Q 005246 517 ----------ACSEVREFEYREKPSKAG 534 (706)
Q Consensus 517 ----------~cSEvreFEYr~~~~~~~ 534 (706)
+-+....|.|.+..++.+
T Consensus 309 ~~~~~~~~~~~~~~~~i~~yvp~t~~q~ 336 (605)
T KOG3836|consen 309 SNNSNSSPPTSSSTKAIFTYVPSTDRQL 336 (605)
T ss_pred ccccccCCccCCCcccceeeecCCCcee
Confidence 112235788888777654
No 134
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=74.38 E-value=3.1 Score=51.78 Aligned_cols=76 Identities=20% Similarity=0.145 Sum_probs=54.8
Q ss_pred cCceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe-eeeeEEeecCeeeeccCCCC--CceeeEEEE
Q 005246 436 EQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNVIRCQAPSHA--AGRVPFYIT 511 (706)
Q Consensus 436 ~qlfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpae~~~~GvLrC~~Pph~--pG~Vpl~Vt 511 (706)
-+.|+|++|+|.-++..|||.|+|.|.++...-+...++..|-=.-. .++.+..-...+.|..-++. ||.|.+.|-
T Consensus 47 c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~dv~~~v~Va~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v~ 125 (1025)
T KOG3610|consen 47 CPLPSITALSPLNGPIEGGTNISIVGTNLGNSLNDVSDGVKVAGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAVG 125 (1025)
T ss_pred cCCCcccceeeccccccCCceeeeeeeehhhhhhhccCCceEeeeecCCCccccccccceeeccCCCCCCCCceeEEec
Confidence 55778999999999999999999999988653222222222221111 44557777788999888877 799988887
No 135
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=46.78 E-value=70 Score=31.32 Aligned_cols=70 Identities=20% Similarity=0.168 Sum_probs=52.6
Q ss_pred ecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe-----eeeeEEeecCeeeeccCCC---CCceeeEEEEeCCC
Q 005246 444 FSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-----EVPAEVLTDNVIRCQAPSH---AAGRVPFYITGSNR 515 (706)
Q Consensus 444 ~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-----eVpae~~~~GvLrC~~Pph---~pG~Vpl~Vt~~n~ 515 (706)
+.|..-.++.. ||.|+-.--.. ......|.|-.. .+++..|-+-|++..+|.. -+|.|.+.|.|++.
T Consensus 3 V~P~rI~cg~~-~vfIiL~~~l~----~~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g~ 77 (142)
T PF14545_consen 3 VQPSRIRCGQP-EVFIILRDPLD----EEDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDGV 77 (142)
T ss_pred ecCceeecCCC-EEEEEEeCCCC----CCCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECCE
Confidence 45777778888 88887553211 123577777432 4788889999999999998 99999999999997
Q ss_pred ccc
Q 005246 516 LAC 518 (706)
Q Consensus 516 ~~c 518 (706)
..|
T Consensus 78 ~~~ 80 (142)
T PF14545_consen 78 SLG 80 (142)
T ss_pred EEE
Confidence 654
No 136
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=43.12 E-value=79 Score=28.05 Aligned_cols=64 Identities=27% Similarity=0.236 Sum_probs=39.7
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe-eeeeEE-eecCeeee--ccCC-CCCceeeEEEE
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEV-LTDNVIRC--QAPS-HAAGRVPFYIT 511 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpae~-~~~GvLrC--~~Pp-h~pG~Vpl~Vt 511 (706)
+.|.-++|.---.+++++|+|.|+.|.. .++||.= +|..-. .+++-++- .+.. ..||.+++.+.
T Consensus 2 p~i~aV~P~~lkaG~~t~vti~Gt~L~~---------~v~l~~Gv~v~~v~~~s~~~v~v~V~~aa~a~~G~~~v~vg 70 (81)
T PF09099_consen 2 PTILAVSPAGLKAGEETTVTIVGTGLAG---------TVDLGPGVEVLKVVSASPDEVVVRVKAAADAAPGIRTVRVG 70 (81)
T ss_dssp SEEEEEESSEEETTCEEEEEEEEES-TT----------EE--TTEEEEEEEEE-STCEEEEEEEECTSSSEEEEEEET
T ss_pred CeEEEECchhccCCCeEEEEEEecCccc---------ceecCCCeEEEEEEEeCCCEEEEEEEEcCCCCCccEEEEec
Confidence 3689999999999999999999999943 2667654 443322 33343333 4444 55677776553
No 137
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=42.41 E-value=38 Score=34.61 Aligned_cols=46 Identities=17% Similarity=0.118 Sum_probs=39.5
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 648 VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 648 pLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
-|.+||..|....+--.++.|-+++. ++|..|+.++|.+++ ..+++
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL-~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKIL-DYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHH-HHhhc
Confidence 46789999999999999999988874 899999999999998 55543
No 138
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=40.97 E-value=43 Score=38.88 Aligned_cols=45 Identities=22% Similarity=0.225 Sum_probs=34.6
Q ss_pred HHHHHHHHHcCCCCccc------CCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 658 EWAMRPIIATGVSPNFR------DARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 658 ~~~V~~LL~~GadvN~r------D~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
...|++|...+++.|++ |..--|+||+|+..|..+|| ..|++.+|
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v-~~~Leeg~ 454 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCV-KYFLEEGC 454 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHH-HHHHHhcC
Confidence 56788999999888764 33457999999999999999 44444433
No 139
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=39.67 E-value=22 Score=43.31 Aligned_cols=55 Identities=27% Similarity=0.164 Sum_probs=46.2
Q ss_pred HHHHHHcCCHHHHHHHHHc-C---CCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 649 VHLAAALGYEWAMRPIIAT-G---VSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 649 LHlAA~lG~~~~V~~LL~~-G---advN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
...||..|....|+..+.. + .++|.+|.-|+++|+.|....+.+++ .||++...+
T Consensus 29 fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~-eLLl~~~~~ 87 (822)
T KOG3609|consen 29 FLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQ-ELLLDTSSE 87 (822)
T ss_pred HHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHH-HHHhcCccc
Confidence 4578899998888876653 2 57899999999999999999999998 999987643
No 140
>KOG3743 consensus Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5) [Transcription]
Probab=39.51 E-value=21 Score=41.41 Aligned_cols=45 Identities=18% Similarity=0.337 Sum_probs=37.2
Q ss_pred CCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCCCC
Q 005246 452 GAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA 503 (706)
Q Consensus 452 ~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph~p 503 (706)
..-+-+.+.|.+|.. ++.+.||++|++|.+-..-+|.|.+|+-.+
T Consensus 505 gd~amlel~g~nf~p-------~l~vwfg~~e~et~~r~~~sl~c~Vp~vs~ 549 (622)
T KOG3743|consen 505 GDVAMLELHGQNFVP-------NLQVWFGDVEAETYYRSGESLQCVVPDVSA 549 (622)
T ss_pred cceeEEEecCCCCCC-------CceeeccccCchhhhcccceEEEEeCChhh
Confidence 344667788998865 799999999999999888899999998443
No 141
>TIGR03437 Soli_cterm Solibacter uncharacterized C-terminal domain. This model describes a protein domain found in 90 proteins of Solibacter usitatus Ellin6076, nearly always as the C-terminal domain of a much larger protein. No homologs to this domain are detected outside of S. usitatus, a member of the Acidobacteria.
Probab=39.28 E-value=1.2e+02 Score=31.58 Aligned_cols=64 Identities=19% Similarity=0.162 Sum_probs=49.6
Q ss_pred CceEEEEEccCCCCCC--------CCCCCceEEeeCCeeeeeEEeecCeeeeccCC-CCCceeeEEEEeCCCc
Q 005246 453 AETKVLIIGMFLGTKK--------LSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRL 516 (706)
Q Consensus 453 ggtKVlI~G~f~~~~~--------~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-h~pG~Vpl~Vt~~n~~ 516 (706)
-|.=|+|-|++|.... ...-.+-+|.|+++.+|-.+++++-+.|.+|. -.+|.+.+.|+..+..
T Consensus 4 PG~~vsIfG~~L~~~t~~~~~~plpt~l~Gv~V~vnG~~APl~yvSp~QIN~qvP~~~~~g~~~v~V~~~g~~ 76 (215)
T TIGR03437 4 PGSIVSIFGTNLAPATLTAAGGPLPTSLGGVSVTVNGVAAPLLYVSPGQINAQVPYEVAPGAATVTVTYNGGA 76 (215)
T ss_pred CCcEEEEEeccCCCccccccCCCCccccCCeEEEECCEEEEEEEeCcceEEEEeCCCcCCCcEEEEEEeCCcc
Confidence 4566888888876421 11124678999999999999999999999998 5689999999876553
No 142
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=37.16 E-value=58 Score=34.47 Aligned_cols=46 Identities=22% Similarity=0.166 Sum_probs=38.4
Q ss_pred CHHHHHHHHHcC-CCCcc---cCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 657 YEWAMRPIIATG-VSPNF---RDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 657 ~~~~V~~LL~~G-advN~---rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
...+++.++.+| ++||. +-..|-|-|.-|..++..+++ .+|+++++
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi-~~Llk~GA 278 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMI-AFLLKYGA 278 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHH-HHHHHcCc
Confidence 456778888888 67775 457899999999999999998 88888876
No 143
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif. The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
Probab=34.73 E-value=18 Score=30.19 Aligned_cols=9 Identities=67% Similarity=1.269 Sum_probs=5.8
Q ss_pred ccCcceeec
Q 005246 70 KDGHRWRKK 78 (706)
Q Consensus 70 kdg~~w~kk 78 (706)
.|||.|||=
T Consensus 2 ~Dgy~WRKY 10 (60)
T PF03106_consen 2 DDGYRWRKY 10 (60)
T ss_dssp -SSS-EEEE
T ss_pred CCCCchhhc
Confidence 499999873
No 144
>PF05587 Anth_Ig: Anthrax receptor extracellular domain; InterPro: IPR008400 Anthrax is an acute disease in humans and animals caused by the bacterium Bacillus anthracis, which can be lethal. There are effective vaccines against anthrax, and some forms of the disease respond well to antibiotic treatment. The anthrax bacillus is one of only a few that can form long-lived spores. The anthrax toxin consists of the proteins protective antigen (PA) lethal factor (LF) and oedema factor (EF). The first step of toxin entry into host cells is the recognition by PA of a receptor on the surface of the target cell. The subsequent cleavage of receptor-bound PA enables EF and LF to bind and form a heptameric PA63 pre-pore, which triggers endocytosis. PA has been shown to bind to two cellular receptors: anthrax toxin receptor/tumour endothelial marker 8 and capillary morphogenesis protein 2 (CMG2), which are closely related host cell receptors. Both bind to PA with high affinity and are capable of mediating toxicity [, ], and both are type 1 membrane proteins that include an approximately 200-aa extracellular von Willebrand factor A (VWA) domain with a metal ion-dependent adhesion site (MIDAS) motif []. This region is found in the putatively extracellular N-terminal half of the anthrax receptor. It is probably part of the Ig superfamily and most closely related to IPR002909 from INTERPRO.; GO: 0004872 receptor activity, 0016021 integral to membrane; PDB: 3N2N_E 1SHT_X 1TZN_o 1SHU_X.
Probab=27.67 E-value=20 Score=33.30 Aligned_cols=74 Identities=20% Similarity=0.327 Sum_probs=0.0
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEee--CCe----eeeeEEeecCeeeeccCC-CCCcee-eEEEE
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF--GEI----EVPAEVLTDNVIRCQAPS-HAAGRV-PFYIT 511 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmF--Gd~----eVpae~~~~GvLrC~~Pp-h~pG~V-pl~Vt 511 (706)
.|..+-|+---+++.-.|.|.|.+|....... .-.|-| .+. +=|+ .++++.|.|-+|- +.||.+ .|+|+
T Consensus 7 Eil~~ePSsvC~ge~f~Vvv~G~GF~~~~~~d--~ViC~F~~n~t~~~~~KP~-~v~dt~llCPaP~l~~~G~~~~v~VS 83 (105)
T PF05587_consen 7 EILSVEPSSVCVGESFQVVVRGNGFNNARNVD--QVICRFKFNDTKTVDEKPV-SVEDTYLLCPAPVLEEPGQTIFVEVS 83 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEcCCceECCCceEEEEECccccccCCCC--eEEEEEEECCeeEEEeCCc-EEcCCEEECCCccccCCCCEEEEEEE
Confidence 47777888888999999999999775543322 344555 443 2255 7899999999988 999974 55677
Q ss_pred eCCCc
Q 005246 512 GSNRL 516 (706)
Q Consensus 512 ~~n~~ 516 (706)
..|+.
T Consensus 84 lNnG~ 88 (105)
T PF05587_consen 84 LNNGK 88 (105)
T ss_dssp -----
T ss_pred EcCCE
Confidence 66655
No 145
>smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Probab=26.28 E-value=25 Score=29.38 Aligned_cols=9 Identities=56% Similarity=1.151 Sum_probs=7.2
Q ss_pred ccCcceeec
Q 005246 70 KDGHRWRKK 78 (706)
Q Consensus 70 kdg~~w~kk 78 (706)
.|||.|||=
T Consensus 2 ~DGy~WRKY 10 (59)
T smart00774 2 DDGYQWRKY 10 (59)
T ss_pred CCccccccc
Confidence 599999863
No 146
>PF12728 HTH_17: Helix-turn-helix domain
Probab=25.10 E-value=56 Score=25.37 Aligned_cols=42 Identities=14% Similarity=0.136 Sum_probs=25.4
Q ss_pred hCChHHHHHHHHccc-cc--ccccCCCCCCCCCceEeeehhhhhh
Q 005246 26 WLRPTEICEILRNYQ-KF--HLTPDPPVRPPAGSLFLFDRKALRY 67 (706)
Q Consensus 26 wl~~~ei~~il~~~~-~~--~~~~~~~~~p~~gs~~l~~r~~~~~ 67 (706)
||+++|+|++|.--. .+ .+.....+....|..++|++..+.-
T Consensus 1 ~lt~~e~a~~l~is~~tv~~~~~~g~i~~~~~g~~~~~~~~~l~~ 45 (51)
T PF12728_consen 1 YLTVKEAAELLGISRSTVYRWIRQGKIPPFKIGRKWRIPKSDLDR 45 (51)
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHcCCCCeEEeCCEEEEeHHHHHH
Confidence 789999999994332 11 2333222222367778888887743
No 147
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=23.52 E-value=85 Score=37.29 Aligned_cols=64 Identities=20% Similarity=0.211 Sum_probs=48.7
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe------eeee-----EEeecCeeeeccCC-CCCcee
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI------EVPA-----EVLTDNVIRCQAPS-HAAGRV 506 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~------eVpa-----e~~~~GvLrC~~Pp-h~pG~V 506 (706)
.-|..|+|+-+..-+|+.|.|+|-.+.. ++.|.||++ -+|. +.+++-.++-+.|+ |.. .|
T Consensus 323 ~~i~~yvp~t~~q~~~~al~ivg~n~~~-------~l~~a~~~~~~s~~~~~~~~~~n~~~~s~~aI~~~~~~~~~s-~~ 394 (605)
T KOG3836|consen 323 KAIFTYVPSTDRQLIEYALQIVGLNMNG-------KLEDARNIANSSLSPTSPMMNNNSEQLSPYAIMSQKPTNNLS-TV 394 (605)
T ss_pred ccceeeecCCCceeeeeEEEEecccccC-------chhhhcCCccccCCCCCcceeccccccCccceeeecCCCCCC-cc
Confidence 5799999999999999999999997754 799999986 2222 22444456666676 777 77
Q ss_pred eEEE
Q 005246 507 PFYI 510 (706)
Q Consensus 507 pl~V 510 (706)
.|.+
T Consensus 395 ~lSl 398 (605)
T KOG3836|consen 395 NLSL 398 (605)
T ss_pred ceee
Confidence 7766
No 148
>PF01913 FTR: Formylmethanofuran-tetrahydromethanopterin formyltransferase; InterPro: IPR022667 Formylmethanofuran:tetrahyromethanopterin formyltransferase (Ftr) is involved in C1 metabolism in methanogenic archaea, sulphate-reducing archaea and methylotrophic bacteria. It catalyses the following reversible reaction: N-formylmethanofuran + 5,6,7,8-tetrahydromethanopterin = methanofuran + 5-formyl-5,6,7,8-tetrahydromethanopterin Ftr from the thermophilic methanogen Methanopyrus kandleri (optimum growth temperature 98 degrees C) is a hyperthermophilic enzyme that is absolutely dependent on the presence of lyotropic salts for activity and thermostability. The crystal structure of Ftr, determined to a reveals a homotetramer composed essentially of two dimers. Each subunit is subdivided into two tightly associated lobes both consisting of a predominantly antiparallel beta sheet flanked by alpha helices forming an alpha/beta sandwich structure. The approximate location of the active site was detected in a region close to the dimer interface []. Ftr from the mesophilic methanogen Methanosarcina barkeri and the sulphate-reducing archaeon Archaeoglobus fulgidus have a similar structure []. In the methylotrophic bacterium Methylobacterium extorquens, Ftr interacts with three other polypeptides to form an Ftr/cyclohydrolase complex which catalyses the hydrolysis of formyl-tetrahydromethanopterin to formate during growth on C1 substrates [].; GO: 0016740 transferase activity, 0006730 one-carbon metabolic process; PDB: 1M5H_E 1M5S_C 1FTR_C 2FHJ_B 2FHK_D.
Probab=20.25 E-value=50 Score=32.37 Aligned_cols=20 Identities=40% Similarity=0.710 Sum_probs=14.3
Q ss_pred hhhhhhhccCcceeecCCCcc
Q 005246 63 KALRYFRKDGHRWRKKKDGKT 83 (706)
Q Consensus 63 ~~~~~frkdg~~w~kkk~g~~ 83 (706)
+.|||| =|||.|.|+-+||.
T Consensus 119 ~~lr~F-GDG~q~sk~~~grr 138 (144)
T PF01913_consen 119 KKLRFF-GDGYQISKEIGGRR 138 (144)
T ss_dssp HHHHGG-GTT--EEEEETTEE
T ss_pred ccccCc-cCCceEEEEECCEE
Confidence 457886 69999999999864
No 149
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=20.23 E-value=2.1e+02 Score=29.64 Aligned_cols=42 Identities=14% Similarity=0.091 Sum_probs=35.3
Q ss_pred HHHHhCC-CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 005246 629 WKIHEGG-KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS 670 (706)
Q Consensus 629 ~kLle~G-adiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~Gad 670 (706)
.-|+..| +.+.+.|..|.+++.+|-..|+..+|..|.+.-.+
T Consensus 29 syllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 29 SYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred HHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 3345567 88999999999999999999999999999886433
Done!