Query 005246
Match_columns 706
No_of_seqs 366 out of 1509
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 19:46:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005246.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005246hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cxk_A Camta1, calmodulin bind 99.9 1.9E-26 6.5E-31 205.1 9.4 88 438-531 6-93 (95)
2 1n0q_A 3ANK, 3 ankyrin repeats 99.5 1.6E-13 5.3E-18 117.4 10.7 77 626-703 16-92 (93)
3 4gpm_A Engineered protein OR26 99.4 2.1E-13 7.3E-18 131.3 10.1 79 626-705 84-162 (169)
4 4gpm_A Engineered protein OR26 99.4 1.4E-12 4.8E-17 125.6 12.1 79 626-705 51-129 (169)
5 3aaa_C Myotrophin, protein V-1 99.4 1.9E-12 6.5E-17 115.8 11.7 78 626-704 21-98 (123)
6 2jab_A H10-2-G3; HER2, darpin, 99.3 7.1E-12 2.4E-16 114.2 12.3 74 627-701 62-135 (136)
7 2zgd_A 3 repeat synthetic anky 99.3 1.3E-11 4.5E-16 109.1 11.9 84 612-698 26-109 (110)
8 1ycs_B 53BP2, P53BP2; ankyrin 99.3 7.3E-12 2.5E-16 125.3 11.1 79 626-705 51-129 (239)
9 3c5r_A BARD-1, BRCA1-associate 99.3 7.1E-12 2.4E-16 113.9 9.9 78 626-704 24-101 (137)
10 1d9s_A Cyclin-dependent kinase 99.3 6.2E-12 2.1E-16 114.6 8.8 75 628-703 60-135 (136)
11 1bi7_B P16INK4A, MTS1, multipl 99.3 7.3E-12 2.5E-16 116.8 9.0 77 627-704 59-136 (156)
12 4b93_B Ankyrin repeat domain-c 99.3 9.9E-12 3.4E-16 127.7 10.5 79 626-705 133-211 (269)
13 2l6b_A NR1C; ankyrin, consensu 99.3 5.6E-12 1.9E-16 111.2 7.2 78 626-704 23-100 (115)
14 3twr_A Tankyrase-2; ankyrin re 99.3 1.7E-11 6E-16 114.4 10.9 78 626-704 56-133 (165)
15 2jab_A H10-2-G3; HER2, darpin, 99.3 1.6E-11 5.5E-16 111.9 10.3 89 613-704 17-105 (136)
16 1bd8_A P19INK4D CDK4/6 inhibit 99.3 1.7E-11 5.9E-16 113.1 10.3 64 631-694 54-117 (156)
17 1d9s_A Cyclin-dependent kinase 99.3 4.9E-12 1.7E-16 115.3 6.3 77 626-704 26-103 (136)
18 1awc_B Protein (GA binding pro 99.3 2E-11 6.9E-16 113.0 10.5 74 628-702 50-123 (153)
19 3ehr_A Osteoclast-stimulating 99.2 2.1E-11 7.3E-16 119.7 11.0 79 626-705 87-166 (222)
20 1ihb_A P18-INK4C(INK6), cyclin 99.2 2.4E-11 8.1E-16 112.7 10.6 77 626-703 84-161 (162)
21 3f6q_A Integrin-linked protein 99.2 2.5E-11 8.7E-16 115.2 10.9 78 626-704 53-130 (179)
22 2vge_A RELA-associated inhibit 99.2 2.7E-11 9.2E-16 121.4 11.2 79 626-705 35-113 (229)
23 1dcq_A PYK2-associated protein 99.2 1.4E-11 4.7E-16 127.5 9.2 77 626-703 186-262 (278)
24 3deo_A Signal recognition part 99.2 2.1E-11 7.2E-16 116.8 9.7 76 627-704 59-135 (183)
25 1n0r_A 4ANK, 4 ankyrin repeats 99.2 4.2E-11 1.4E-15 105.4 10.5 76 627-703 50-125 (126)
26 3muj_A Transcription factor CO 99.2 3.3E-11 1.1E-15 112.2 9.7 84 439-529 6-91 (138)
27 3v30_A DNA-binding protein rfx 99.2 3.7E-11 1.3E-15 112.9 10.1 76 626-702 83-158 (172)
28 2y1l_E Darpin-8.4; hydrolase-i 99.2 9E-11 3.1E-15 110.6 12.5 89 614-704 50-138 (169)
29 1ihb_A P18-INK4C(INK6), cyclin 99.2 4.7E-11 1.6E-15 110.7 10.2 77 627-704 52-128 (162)
30 3ui2_A Signal recognition part 99.2 3E-11 1E-15 121.8 9.6 77 627-705 60-137 (244)
31 2y1l_E Darpin-8.4; hydrolase-i 99.2 6.3E-11 2.2E-15 111.6 10.8 76 626-702 94-169 (169)
32 3v31_A Ankyrin repeat family A 99.2 6.5E-11 2.2E-15 110.7 10.5 75 627-702 84-158 (167)
33 1oy3_D Transcription factor in 99.2 4.7E-11 1.6E-15 119.7 9.9 79 626-705 172-251 (282)
34 1n0r_A 4ANK, 4 ankyrin repeats 99.2 8.4E-11 2.9E-15 103.5 10.1 77 627-704 17-93 (126)
35 2rfm_A Putative ankyrin repeat 99.2 6.7E-11 2.3E-15 113.3 10.1 74 627-701 116-189 (192)
36 1bi7_B P16INK4A, MTS1, multipl 99.2 3.2E-11 1.1E-15 112.4 7.6 77 626-704 26-103 (156)
37 1s70_B 130 kDa myosin-binding 99.2 9E-11 3.1E-15 119.4 11.5 88 614-704 44-131 (299)
38 4g8k_A 2-5A-dependent ribonucl 99.2 7E-11 2.4E-15 123.1 10.1 73 630-703 224-297 (337)
39 3lvq_E ARF-GAP with SH3 domain 99.2 4.5E-11 1.6E-15 133.2 9.0 78 626-704 188-265 (497)
40 3v30_A DNA-binding protein rfx 99.1 6.2E-11 2.1E-15 111.4 8.3 79 626-705 50-128 (172)
41 1n0q_A 3ANK, 3 ankyrin repeats 99.1 8.1E-11 2.8E-15 100.4 8.2 61 644-705 1-61 (93)
42 3f6q_A Integrin-linked protein 99.1 2E-10 7E-15 109.0 11.6 89 614-705 9-98 (179)
43 2rfm_A Putative ankyrin repeat 99.1 1E-10 3.5E-15 112.0 9.6 78 626-704 82-159 (192)
44 4hbd_A KN motif and ankyrin re 99.1 1E-10 3.4E-15 120.0 10.0 76 626-702 197-273 (276)
45 3utm_A Tankyrase-1; tankyrase, 99.1 1.4E-10 5E-15 119.3 11.2 78 626-704 228-305 (351)
46 1yyh_A HN1;, notch 1, ankyrin 99.1 1.3E-10 4.5E-15 116.5 10.6 74 626-700 171-244 (253)
47 1awc_B Protein (GA binding pro 99.1 1.4E-10 4.9E-15 107.2 9.9 72 626-698 81-152 (153)
48 3v31_A Ankyrin repeat family A 99.1 1.4E-10 4.8E-15 108.5 9.8 89 614-704 39-127 (167)
49 1bd8_A P19INK4D CDK4/6 inhibit 99.1 1.4E-10 4.9E-15 106.9 9.6 74 626-701 82-155 (156)
50 2b0o_E UPLC1; arfgap, structur 99.1 7.1E-11 2.4E-15 123.7 8.3 76 626-702 207-282 (301)
51 3lvq_E ARF-GAP with SH3 domain 99.1 1.4E-10 4.9E-15 129.2 11.2 91 612-705 134-233 (497)
52 3twr_A Tankyrase-2; ankyrin re 99.1 2.5E-10 8.5E-15 106.5 11.1 78 627-705 23-101 (165)
53 2dzn_A Probable 26S proteasome 99.1 2E-10 6.9E-15 111.9 10.4 78 626-704 121-200 (228)
54 2f8y_A Notch homolog 1, transl 99.1 2.5E-10 8.5E-15 111.1 10.8 78 626-704 139-216 (223)
55 3c5r_A BARD-1, BRCA1-associate 99.1 1.9E-10 6.4E-15 104.5 9.0 68 635-704 1-68 (137)
56 2xai_A ASB-9, ankyrin repeat a 99.1 2.4E-10 8.3E-15 115.3 10.6 74 628-702 19-92 (261)
57 4hbd_A KN motif and ankyrin re 99.1 2E-10 6.9E-15 117.7 9.8 78 626-704 164-242 (276)
58 1wdy_A 2-5A-dependent ribonucl 99.1 3.3E-10 1.1E-14 112.9 11.1 79 626-705 200-279 (285)
59 1k1a_A B-cell lymphoma 3-encod 99.1 3.1E-10 1.1E-14 111.2 10.7 78 626-704 130-208 (241)
60 1dcq_A PYK2-associated protein 99.1 4.3E-10 1.5E-14 116.3 11.7 90 613-705 133-231 (278)
61 2f8y_A Notch homolog 1, transl 99.1 4E-10 1.4E-14 109.6 10.7 78 626-704 106-183 (223)
62 3t8k_A Uncharacterized protein 99.1 5.6E-11 1.9E-15 116.0 4.6 75 626-701 95-176 (186)
63 3aji_A 26S proteasome non-ATPa 99.1 4.1E-10 1.4E-14 110.2 10.8 75 628-703 122-196 (231)
64 3jxi_A Vanilloid receptor-rela 99.1 1.8E-10 6.2E-15 115.1 8.3 77 626-703 107-209 (260)
65 3utm_A Tankyrase-1; tankyrase, 99.1 3.9E-10 1.3E-14 116.1 11.0 90 613-704 60-149 (351)
66 3hra_A Ankyrin repeat family p 99.1 3E-10 1E-14 108.7 9.5 75 627-702 121-201 (201)
67 2b0o_E UPLC1; arfgap, structur 99.1 3.7E-10 1.3E-14 118.2 10.8 91 612-705 153-252 (301)
68 1ikn_D Protein (I-kappa-B-alph 99.1 1E-10 3.6E-15 115.4 6.2 77 627-704 132-209 (236)
69 2etb_A Transient receptor pote 99.1 2.4E-10 8.2E-15 114.2 8.4 77 626-703 104-205 (256)
70 3jue_A Arfgap with coiled-coil 99.0 4.6E-10 1.6E-14 121.5 10.7 88 613-702 237-324 (368)
71 2pnn_A Transient receptor pote 99.0 2.6E-10 8.9E-15 115.3 8.2 77 626-703 115-217 (273)
72 3b7b_A Euchromatic histone-lys 99.0 6E-10 2E-14 109.4 10.3 77 627-704 126-202 (237)
73 3d9h_A CDNA FLJ77766, highly s 99.0 5.9E-10 2E-14 114.5 10.5 77 627-704 74-150 (285)
74 2rfa_A Transient receptor pote 99.0 4.2E-10 1.4E-14 110.3 8.8 77 626-703 135-221 (232)
75 3hra_A Ankyrin repeat family p 99.0 9.7E-10 3.3E-14 105.2 11.0 76 626-702 53-129 (201)
76 3ljn_A Hypothetical protein; a 99.0 3.3E-10 1.1E-14 119.3 8.4 77 626-703 187-268 (364)
77 3jxi_A Vanilloid receptor-rela 99.0 1.7E-10 5.8E-15 115.4 6.0 76 626-702 154-248 (260)
78 2rfa_A Transient receptor pote 99.0 5.9E-10 2E-14 109.3 9.7 78 627-705 18-101 (232)
79 2pnn_A Transient receptor pote 99.0 2.2E-10 7.5E-15 115.8 6.7 77 626-703 162-257 (273)
80 2etb_A Transient receptor pote 99.0 2.3E-10 7.9E-15 114.4 6.6 76 626-702 150-244 (256)
81 2dzn_A Probable 26S proteasome 99.0 9E-10 3.1E-14 107.3 10.6 76 626-702 86-163 (228)
82 1n11_A Ankyrin; clathrin, BAND 99.0 5.5E-10 1.9E-14 120.3 9.8 77 627-704 293-369 (437)
83 3ljn_A Hypothetical protein; a 99.0 3.5E-10 1.2E-14 119.1 8.1 79 626-705 154-237 (364)
84 1yyh_A HN1;, notch 1, ankyrin 99.0 7E-10 2.4E-14 111.2 9.8 78 626-704 138-215 (253)
85 3t8k_A Uncharacterized protein 99.0 1.2E-10 4.2E-15 113.6 3.9 79 626-705 56-147 (186)
86 3aji_A 26S proteasome non-ATPa 99.0 1.1E-09 3.7E-14 107.1 10.7 78 626-704 87-164 (231)
87 1oy3_D Transcription factor in 99.0 3.2E-10 1.1E-14 113.5 7.1 76 627-703 24-102 (282)
88 2xai_A ASB-9, ankyrin repeat a 99.0 9.1E-10 3.1E-14 111.1 9.8 78 626-705 115-192 (261)
89 1sw6_A Regulatory protein SWI6 99.0 4E-10 1.4E-14 118.3 7.3 70 625-694 110-183 (327)
90 1ikn_D Protein (I-kappa-B-alph 99.0 1.1E-09 3.7E-14 108.1 10.0 78 627-705 93-177 (236)
91 3jue_A Arfgap with coiled-coil 99.0 7.8E-10 2.7E-14 119.7 9.7 78 627-705 215-294 (368)
92 1k1a_A B-cell lymphoma 3-encod 99.0 1.7E-09 5.8E-14 106.0 11.2 76 627-703 61-140 (241)
93 4b93_B Ankyrin repeat domain-c 99.0 7.9E-10 2.7E-14 113.5 9.1 79 626-705 100-178 (269)
94 2fo1_E LIN-12 protein; beta-ba 99.0 8.6E-10 2.9E-14 117.7 9.5 76 627-703 294-370 (373)
95 2zgd_A 3 repeat synthetic anky 99.0 6.9E-10 2.4E-14 98.0 7.2 66 639-705 18-83 (110)
96 1wdy_A 2-5A-dependent ribonucl 99.0 1.7E-09 5.8E-14 107.8 10.8 78 626-704 53-130 (285)
97 3kea_A K1L; tropism, ANK repea 99.0 8.9E-10 3E-14 113.3 8.8 77 627-704 77-154 (285)
98 3kea_A K1L; tropism, ANK repea 99.0 6.2E-10 2.1E-14 114.5 7.3 76 626-704 45-120 (285)
99 3aaa_C Myotrophin, protein V-1 99.0 4.8E-10 1.6E-14 100.1 5.7 66 626-691 54-119 (123)
100 1n11_A Ankyrin; clathrin, BAND 99.0 1.4E-09 4.6E-14 117.3 10.2 76 627-703 62-137 (437)
101 2vge_A RELA-associated inhibit 99.0 2.8E-10 9.5E-15 114.0 4.4 77 626-703 68-147 (229)
102 3deo_A Signal recognition part 99.0 1.1E-09 3.9E-14 104.7 8.3 63 626-688 90-153 (183)
103 3ehr_A Osteoclast-stimulating 98.9 3.5E-10 1.2E-14 111.0 4.5 77 626-703 120-197 (222)
104 2l6b_A NR1C; ankyrin, consensu 98.9 7.7E-10 2.6E-14 97.4 6.0 65 640-705 4-68 (115)
105 4g8k_A 2-5A-dependent ribonucl 98.9 2.3E-09 7.7E-14 111.7 10.2 72 628-705 255-327 (337)
106 3ui2_A Signal recognition part 98.9 1.6E-09 5.4E-14 109.1 8.7 75 626-701 91-182 (244)
107 3d9h_A CDNA FLJ77766, highly s 98.9 2.4E-09 8.2E-14 109.9 10.2 76 627-704 172-247 (285)
108 1ycs_B 53BP2, P53BP2; ankyrin 98.9 5.2E-10 1.8E-14 111.8 4.7 76 626-702 84-162 (239)
109 3b7b_A Euchromatic histone-lys 98.9 3.6E-09 1.2E-13 103.8 10.6 78 626-704 58-136 (237)
110 3eu9_A Huntingtin-interacting 98.9 2.6E-09 9E-14 103.9 9.4 76 627-703 158-234 (240)
111 1s70_B 130 kDa myosin-binding 98.9 5.9E-09 2E-13 105.9 11.3 71 634-705 188-258 (299)
112 3mlp_A Transcription factor CO 98.9 5.3E-09 1.8E-13 109.9 10.3 90 438-534 231-322 (402)
113 2fo1_E LIN-12 protein; beta-ba 98.9 4.9E-09 1.7E-13 111.9 10.3 68 631-699 152-219 (373)
114 3eu9_A Huntingtin-interacting 98.8 1.4E-08 4.6E-13 98.8 11.1 89 614-704 45-134 (240)
115 1sw6_A Regulatory protein SWI6 98.7 1.1E-08 3.8E-13 107.3 6.4 75 626-701 145-227 (327)
116 2aja_A Ankyrin repeat family p 98.4 2.5E-08 8.7E-13 108.1 -1.1 74 626-701 142-221 (376)
117 2aja_A Ankyrin repeat family p 98.3 1.9E-07 6.7E-12 101.2 1.9 77 626-704 106-188 (376)
118 1uad_C RSEC5, exocyst complex 98.2 4.1E-06 1.4E-10 74.6 9.0 84 438-529 7-95 (99)
119 3tc9_A Hypothetical hydrolase; 98.0 1.1E-05 3.7E-10 88.5 9.4 86 437-529 16-106 (430)
120 3hrp_A Uncharacterized protein 97.8 3.3E-05 1.1E-09 83.9 9.3 87 436-529 15-105 (409)
121 3kya_A Putative phosphatase; s 97.8 2.7E-05 9.3E-10 87.6 8.2 87 436-529 15-104 (496)
122 2uzx_B Hepatocyte growth facto 97.6 6.1E-05 2.1E-09 88.4 6.9 92 437-528 540-635 (727)
123 4hw6_A Hypothetical protein, I 97.5 0.00018 6.3E-09 78.9 9.6 88 436-529 17-108 (433)
124 2yrp_A Nuclear factor of activ 97.3 0.0008 2.7E-08 61.3 9.4 87 435-529 5-109 (114)
125 2uzx_B Hepatocyte growth facto 97.3 3E-05 1E-09 91.0 0.0 74 438-516 635-709 (727)
126 1ikn_C P50D, protein (NF-kappa 96.0 0.016 5.5E-07 53.2 7.5 85 440-530 5-107 (119)
127 1u36_A DNA-binding, nuclear fa 95.4 0.031 1.1E-06 50.3 7.1 83 440-528 5-105 (106)
128 1my7_A NF-kappab P65 (RELA) su 95.0 0.043 1.5E-06 50.0 6.5 88 440-529 5-101 (114)
129 1zk9_A Transcription factor RE 94.2 0.024 8.2E-07 51.3 3.0 88 439-528 13-109 (110)
130 1oy3_C Transcription factor P6 94.1 0.091 3.1E-06 49.1 6.7 88 440-529 5-101 (136)
131 3iag_C Recombining binding pro 93.3 0.17 5.9E-06 54.9 8.2 68 455-529 343-421 (422)
132 2v2t_A RELB, transcription fac 92.1 0.23 8E-06 51.9 7.0 84 439-528 191-287 (288)
133 1nfk_A Protein (nuclear factor 91.9 0.28 9.7E-06 52.1 7.5 85 439-529 210-312 (325)
134 1a3q_A Protein (nuclear factor 91.8 0.33 1.1E-05 50.7 7.7 82 440-527 187-284 (285)
135 1p7h_L Nuclear factor of activ 91.5 0.3 1E-05 51.1 7.0 82 437-528 184-285 (286)
136 1svc_P Protein (nuclear factor 91.4 0.31 1.1E-05 52.4 7.1 85 439-529 250-352 (365)
137 1ikn_A P65, protein (NF-kappa- 91.0 0.4 1.4E-05 50.1 7.3 85 439-529 176-273 (286)
138 2o61_A Transcription factor P6 90.3 0.4 1.4E-05 54.2 7.0 85 440-530 178-275 (540)
139 3orj_A Sugar-binding protein; 90.2 0.54 1.8E-05 51.4 7.7 79 437-529 112-197 (439)
140 1imh_C NF-AT5, tonebp, nuclear 89.5 0.85 2.9E-05 47.5 8.3 87 438-528 181-280 (281)
141 1gji_A C-REL protein, C-REL pr 88.9 0.58 2E-05 48.7 6.5 84 439-528 179-274 (275)
142 3brd_A LIN-12 and GLP-1 phenot 81.6 2.8 9.7E-05 46.3 7.8 82 439-528 376-474 (477)
143 3oky_A Plexin-A2; transmembran 61.9 24 0.00081 41.1 9.7 87 436-529 526-625 (681)
144 2d9z_A Protein kinase C, NU ty 52.3 8.4 0.00029 35.6 3.0 29 101-131 12-40 (129)
145 3orj_A Sugar-binding protein; 48.2 17 0.00057 39.9 5.0 69 450-528 34-111 (439)
146 2ayd_A WRKY transcription fact 30.5 15 0.00051 31.0 0.9 8 70-77 15-22 (76)
147 1wj2_A Probable WRKY transcrip 28.1 15 0.0005 31.2 0.4 10 69-78 17-26 (78)
148 1qho_A Alpha-amylase; glycosid 24.3 2.1E+02 0.0071 32.8 9.3 66 438-511 498-563 (686)
149 2coa_A Protein kinase C, D2 ty 20.8 84 0.0029 28.9 4.0 30 100-131 11-40 (125)
No 1
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=99.93 E-value=1.9e-26 Score=205.06 Aligned_cols=88 Identities=34% Similarity=0.717 Sum_probs=81.2
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCCCCceeeEEEEeCCCcc
Q 005246 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRLA 517 (706)
Q Consensus 438 lfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph~pG~Vpl~Vt~~n~~~ 517 (706)
+++|+||+|+|||..|||||+|+|.||.. ..+|.||||+++||++++++|+|||++|||.||+|+|+|+++++.
T Consensus 6 ~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-----gs~~~~~fG~~~vpa~~~s~~vl~C~tPp~~~G~v~~~v~~d~~~- 79 (95)
T 2cxk_A 6 SGMVTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQI- 79 (95)
T ss_dssp CSCCCEEECSEECTTCCCEEEEESSCCCC-----SSCEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEE-
T ss_pred cEEEEEECCCcccCCCCEEEEEEeECCCC-----CccEEEEECCEEEeEEEeECCEEEEEecCCCCceEeEEEEECCee-
Confidence 56899999999999999999999999965 458999999999999999999999999999999999999999887
Q ss_pred cCceeeeeeecCCC
Q 005246 518 CSEVREFEYREKPS 531 (706)
Q Consensus 518 cSEvreFEYr~~~~ 531 (706)
+|++++||||+.+.
T Consensus 80 ~s~~~~FeY~~~Pt 93 (95)
T 2cxk_A 80 ISNSVVFEYKSGPS 93 (95)
T ss_dssp CSCCEEEEECCC--
T ss_pred cCCceEEEEeCCCC
Confidence 59999999998754
No 2
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.48 E-value=1.6e-13 Score=117.39 Aligned_cols=77 Identities=30% Similarity=0.369 Sum_probs=72.1
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++
T Consensus 16 ~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~-~~Ll~~ga 92 (93)
T 1n0q_A 16 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV-KLLLEAGA 92 (93)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTC
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH-HHHHHcCC
Confidence 356677888999999999999999999999999999999999999999999999999999999999999 88888775
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.44 E-value=2.1e-13 Score=131.34 Aligned_cols=79 Identities=27% Similarity=0.278 Sum_probs=71.4
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
.+++.|++.|+++|.+|..|+||||+||..|+.++|++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.|
T Consensus 84 ~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv-~~Ll~~GA~i 162 (169)
T 4gpm_A 84 EVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVV-KLLEKQGGWL 162 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHTC----
T ss_pred HHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH-HHHHHCCCCc
Confidence 356778889999999999999999999999999999999999999999999999999999999999998 9999988764
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.39 E-value=1.4e-12 Score=125.59 Aligned_cols=79 Identities=28% Similarity=0.310 Sum_probs=72.0
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
.+++.+++.|++++.+|..|+||||+||..|+.++|++|+.+|+++|.+|..|+||||+||..|+.++| ++|++.++.+
T Consensus 51 ~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v-~~Ll~~gad~ 129 (169)
T 4gpm_A 51 EVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV-KLLISKGADV 129 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTCCT
T ss_pred HHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHHcCCCc
Confidence 456678889999999999999999999999999999999999999999999999999999999999999 8888877643
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.39 E-value=1.9e-12 Score=115.82 Aligned_cols=78 Identities=24% Similarity=0.214 Sum_probs=72.2
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 21 ~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v-~~Ll~~ga~ 98 (123)
T 3aaa_C 21 DEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCV-KLLLSKGAD 98 (123)
T ss_dssp HHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHH-HHHHHcCCC
Confidence 346678889999999999999999999999999999999999999999999999999999999999999 888887664
No 6
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.34 E-value=7.1e-12 Score=114.22 Aligned_cols=74 Identities=27% Similarity=0.284 Sum_probs=49.9
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.
T Consensus 62 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~-~~Ll~~ 135 (136)
T 2jab_A 62 IVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLA-EILQKL 135 (136)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHC
T ss_pred HHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHH-HHHHHc
Confidence 45555666666666666777777777777777777777777777776677777777777777777766 555554
No 7
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.30 E-value=1.3e-11 Score=109.12 Aligned_cols=84 Identities=23% Similarity=0.218 Sum_probs=72.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 005246 612 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRL 691 (706)
Q Consensus 612 d~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~ 691 (706)
..|+.++..+.+ .+++.|++.|++++.+|..|.||||+||..|+..++++|+..|++++.+|..|+||||+|+..|+.
T Consensus 26 t~L~~A~~~g~~--~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 103 (110)
T 2zgd_A 26 KKLLEAARAGQD--DEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNE 103 (110)
T ss_dssp HHHHHHHHHTCH--HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred hHHHHHHHcCCH--HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCH
Confidence 334444444333 356778888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 005246 692 GCYLEVL 698 (706)
Q Consensus 692 eiVa~LL 698 (706)
+++ ++|
T Consensus 104 ~~~-~~L 109 (110)
T 2zgd_A 104 DLA-EIL 109 (110)
T ss_dssp HHH-HHH
T ss_pred HHH-HHh
Confidence 998 655
No 8
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.30 E-value=7.3e-12 Score=125.27 Aligned_cols=79 Identities=24% Similarity=0.262 Sum_probs=72.4
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
.+++.|++.|++++.+|..|+||||+||..|+.++|++|+..|+++|.+|..|+||||+|+..|+.++| ++|++.++.+
T Consensus 51 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v-~~Ll~~ga~~ 129 (239)
T 1ycs_B 51 DLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVC-KFLVESGAAV 129 (239)
T ss_dssp HHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHH-HHHHHTTCCT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH-HHHHHcCCCc
Confidence 457778889999999999999999999999999999999999999999999999999999999999998 8888877654
No 9
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.30 E-value=7.1e-12 Score=113.95 Aligned_cols=78 Identities=21% Similarity=0.187 Sum_probs=71.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 24 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~ga~ 101 (137)
T 3c5r_A 24 PSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIV-KLLLSYGAS 101 (137)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHH-HHHHHcCCC
Confidence 346677888999999999999999999999999999999999999999999999999999999999999 888887664
No 10
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.28 E-value=6.2e-12 Score=114.61 Aligned_cols=75 Identities=23% Similarity=0.125 Sum_probs=68.8
Q ss_pred HHHHHhCCCCCCccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 628 VWKIHEGGKGPNVIDDG-GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 628 v~kLle~GadiN~~D~~-G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
++.|++.|++++.+|.. |+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++
T Consensus 60 v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~-~~Ll~~Ga 135 (136)
T 1d9s_A 60 AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIA-RYLHAATG 135 (136)
T ss_dssp HHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHH-HHHHHHHC
T ss_pred HHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH-HHHHHcCC
Confidence 44455669999999999 99999999999999999999999999999999999999999999999999 88887654
No 11
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.28 E-value=7.3e-12 Score=116.80 Aligned_cols=77 Identities=23% Similarity=0.174 Sum_probs=70.2
Q ss_pred HHHHHHhCCCCCCccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQG-VVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~T-pLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.|++++.+|..|+| |||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 59 ~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v-~~Ll~~ga~ 136 (156)
T 1bi7_B 59 VAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVA-RYLRAAAGG 136 (156)
T ss_dssp HHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHH-HHHSSCC--
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHH-HHHHHcCCC
Confidence 355667789999999999999 99999999999999999999999999999999999999999999999 888887764
No 12
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.27 E-value=9.9e-12 Score=127.73 Aligned_cols=79 Identities=23% Similarity=0.179 Sum_probs=72.5
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
.+++.|++.|+++|.+|..|+||||+||..|+.++|++|+..|+++|.+|..|+||||+||..|+.++| ++|++.++.+
T Consensus 133 ~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v-~~Ll~~Gad~ 211 (269)
T 4b93_B 133 QVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVV-ELLLLHGASV 211 (269)
T ss_dssp HHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHH-HHHHHTTCCS
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHH-HHHHHCCCCC
Confidence 356677888999999999999999999999999999999999999999999999999999999999999 8888887643
No 13
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.26 E-value=5.6e-12 Score=111.20 Aligned_cols=78 Identities=26% Similarity=0.193 Sum_probs=72.7
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++.
T Consensus 23 ~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~-~~Ll~~ga~ 100 (115)
T 2l6b_A 23 EEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIV-KLLDAKGAD 100 (115)
T ss_dssp HHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHH-HHHHTTSSS
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHH-HHHHHcCCC
Confidence 356678889999999999999999999999999999999999999999999999999999999999998 888888764
No 14
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.26 E-value=1.7e-11 Score=114.40 Aligned_cols=78 Identities=22% Similarity=0.183 Sum_probs=69.5
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 56 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~ga~ 133 (165)
T 3twr_A 56 SVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEIC-KLLLQHGAD 133 (165)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHH-HHHHHcCCC
Confidence 356677788999999999999999999999999999999999999999999999999999999999998 777777654
No 15
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.26 E-value=1.6e-11 Score=111.87 Aligned_cols=89 Identities=29% Similarity=0.267 Sum_probs=77.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005246 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLG 692 (706)
Q Consensus 613 ~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~e 692 (706)
.|+.++..+.+ .+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+
T Consensus 17 ~l~~A~~~g~~--~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 94 (136)
T 2jab_A 17 KLLEAARAGQD--DEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLE 94 (136)
T ss_dssp HHHHHHHHTCH--HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHHhCCH--HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 33444444433 3567788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCC
Q 005246 693 CYLEVLIKFLIY 704 (706)
Q Consensus 693 iVa~LLle~~~~ 704 (706)
+| ++|++.++.
T Consensus 95 ~v-~~Ll~~g~~ 105 (136)
T 2jab_A 95 IA-EVLLKHGAD 105 (136)
T ss_dssp HH-HHHHHTTCC
T ss_pred HH-HHHHHcCCC
Confidence 99 888887654
No 16
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.26 E-value=1.7e-11 Score=113.14 Aligned_cols=64 Identities=28% Similarity=0.420 Sum_probs=32.6
Q ss_pred HHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHH
Q 005246 631 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCY 694 (706)
Q Consensus 631 Lle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiV 694 (706)
|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++|
T Consensus 54 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 117 (156)
T 1bd8_A 54 LLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVV 117 (156)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHH
Confidence 3344555555555555555555555555555555555555555555555555555555555554
No 17
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.25 E-value=4.9e-12 Score=115.30 Aligned_cols=77 Identities=22% Similarity=0.235 Sum_probs=71.3
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~-G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|+||||+|+. |+.+++++|+..|++++.+|.. |+||||+|+..|+.++| ++|++.++.
T Consensus 26 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~ga~ 103 (136)
T 1d9s_A 26 ETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTL-VVLHRAGAR 103 (136)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHH-HHHHHTCCC
T ss_pred HHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHH-HHHHHcCCC
Confidence 35667788899999999999999999999 9999999999999999999999 99999999999999999 888887654
No 18
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.25 E-value=2e-11 Score=113.01 Aligned_cols=74 Identities=24% Similarity=0.310 Sum_probs=39.8
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 628 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 628 v~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.+
T Consensus 50 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~g 123 (153)
T 1awc_B 50 TEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV-ELLIKYG 123 (153)
T ss_dssp HHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTT
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHHcC
Confidence 3344445555555555555555555555555555555555555555555555555555555555555 4444443
No 19
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.25 E-value=2.1e-11 Score=119.73 Aligned_cols=79 Identities=19% Similarity=0.174 Sum_probs=71.6
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~-GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|+||||+||..|+..+|++|+.. |++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 87 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v-~~Ll~~ga~ 165 (222)
T 3ehr_A 87 SWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIV-QLLLAKGAR 165 (222)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHH-HHHHHHTCC
T ss_pred HHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHH-HHHHHcCCC
Confidence 356678889999999999999999999999999999999998 999999999999999999999999998 888877664
Q ss_pred C
Q 005246 705 I 705 (706)
Q Consensus 705 i 705 (706)
+
T Consensus 166 ~ 166 (222)
T 3ehr_A 166 T 166 (222)
T ss_dssp S
T ss_pred C
Confidence 3
No 20
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.24 E-value=2.4e-11 Score=112.68 Aligned_cols=77 Identities=22% Similarity=0.188 Sum_probs=65.7
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS-PNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~Gad-vN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++ ++.+|..|+||||+|+..|+.+++ ++|++.++
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~-~~Ll~~GA 161 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVV-SLMQANGA 161 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTC-
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHH-HHHHHhCC
Confidence 456677788899998899999999999999999999999999887 588899999999999999999998 88887765
No 21
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.24 E-value=2.5e-11 Score=115.23 Aligned_cols=78 Identities=23% Similarity=0.278 Sum_probs=68.4
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 53 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v-~~Ll~~ga~ 130 (179)
T 3f6q_A 53 AVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVA-EDLVANGAL 130 (179)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH-HHHHHCCCC
Confidence 356677778999999999999999999999999999999999999999999999999999999999998 777777654
No 22
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.23 E-value=2.7e-11 Score=121.41 Aligned_cols=79 Identities=20% Similarity=0.146 Sum_probs=71.0
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
.+++.|++.|++++.+|..|+||||+||..|+.++|++|+..|+++|.+|..|+||||+|+..|+.++| ++|++.++.+
T Consensus 35 ~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v-~~Ll~~ga~~ 113 (229)
T 2vge_A 35 EVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVIC-MALVQHGAAI 113 (229)
T ss_dssp HHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH-HHHHTTTCCT
T ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHHcCCCc
Confidence 346677788999999999999999999999999999999999999999999999999999999999998 8888876653
No 23
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.23 E-value=1.4e-11 Score=127.51 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=71.6
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.+++.|++.|+++|.+|..|+||||+||..|+.++|++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++
T Consensus 186 ~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v-~~Ll~~ga 262 (278)
T 1dcq_A 186 HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCE-ELLTQALS 262 (278)
T ss_dssp HHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHHHT
T ss_pred HHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHH-HHHHHcCC
Confidence 456777888999999999999999999999999999999999999999999999999999999999999 78877654
No 24
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.23 E-value=2.1e-11 Score=116.84 Aligned_cols=76 Identities=25% Similarity=0.376 Sum_probs=68.4
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD-~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++ |++++.+|..|+||||+|+..|+.+++++|+..|+++|.+| ..|+||||+|+..|+.++| ++|++.++.
T Consensus 59 ~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v-~~Ll~~ga~ 135 (183)
T 3deo_A 59 ALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVV-EALVELGAD 135 (183)
T ss_dssp HHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHH-HHHHHHTCC
T ss_pred HHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHH-HHHHHcCCC
Confidence 4566777 89999999999999999999999999999999999999998 8999999999999999998 788777654
No 25
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.22 E-value=4.2e-11 Score=105.41 Aligned_cols=76 Identities=30% Similarity=0.393 Sum_probs=71.2
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++
T Consensus 50 ~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~-~~Ll~~Ga 125 (126)
T 1n0r_A 50 VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV-KLLLEAGA 125 (126)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHHTC
T ss_pred HHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHH-HHHHHcCC
Confidence 46667788999999999999999999999999999999999999999999999999999999999999 88888775
No 26
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=99.21 E-value=3.3e-11 Score=112.16 Aligned_cols=84 Identities=26% Similarity=0.404 Sum_probs=76.3
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCC-CCCceeeEEEEeCCCcc
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRLA 517 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-h~pG~Vpl~Vt~~n~~~ 517 (706)
+.|+.++|+.|+..||+.|+|+|.+|.+ ++.|+||+..+=.++|....|||++|| |.||.|.|.++..++.-
T Consensus 6 P~I~~i~P~eG~~~GG~~V~I~G~nF~~-------GlqV~FG~t~~w~e~itphairv~~PP~~~pG~V~VTl~~k~kqf 78 (138)
T 3muj_A 6 PCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQF 78 (138)
T ss_dssp CEEEEEESSEEETTCCCEEEEEEESCCT-------TCEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEEE
T ss_pred CceeEecCCCCCccCCeEEEEeCCCccc-------CCEEEECCeeeeeeeecccceEEECCCCCCCCceEEEEeecCccc
Confidence 4799999999999999999999998865 899999999999999999999999999 99999999999988887
Q ss_pred cCce-eeeeeecC
Q 005246 518 CSEV-REFEYREK 529 (706)
Q Consensus 518 cSEv-reFEYr~~ 529 (706)
|... ..|.|-.-
T Consensus 79 ~~g~p~~F~Y~~l 91 (138)
T 3muj_A 79 CKGAPGRFVYTAL 91 (138)
T ss_dssp CTTSCEEEEEECC
T ss_pred ccCCCceEEEecC
Confidence 7644 77998764
No 27
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.21 E-value=3.7e-11 Score=112.89 Aligned_cols=76 Identities=17% Similarity=0.118 Sum_probs=58.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++..
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~-~~L~~~~ 158 (172)
T 3v30_A 83 DIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQ-QVIENHI 158 (172)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHH-HHHHHHH
Confidence 346667777888888888888888888888888888888888888888888888888888888888887 6666543
No 28
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.20 E-value=9e-11 Score=110.58 Aligned_cols=89 Identities=28% Similarity=0.298 Sum_probs=73.1
Q ss_pred HHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 005246 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGC 693 (706)
Q Consensus 614 LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~ei 693 (706)
.|+.++...- ..+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++
T Consensus 50 ~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 128 (169)
T 2y1l_E 50 PLHLAAFNGH-LEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEI 128 (169)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCC-HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 3444443322 245677788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCC
Q 005246 694 YLEVLIKFLIY 704 (706)
Q Consensus 694 Va~LLle~~~~ 704 (706)
| ++|++.++.
T Consensus 129 v-~~Ll~~g~~ 138 (169)
T 2y1l_E 129 V-EVLLKNGAD 138 (169)
T ss_dssp H-HHHHHTTCC
T ss_pred H-HHHHHcCCC
Confidence 8 788777654
No 29
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.20 E-value=4.7e-11 Score=110.70 Aligned_cols=77 Identities=26% Similarity=0.383 Sum_probs=70.8
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 52 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~g~~ 128 (162)
T 1ihb_A 52 IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV-EFLVKHTAS 128 (162)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHHSCC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH-HHHHHccCC
Confidence 45566778999999999999999999999999999999999999999999999999999999999999 777776654
No 30
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.20 E-value=3e-11 Score=121.76 Aligned_cols=77 Identities=26% Similarity=0.389 Sum_probs=69.0
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD-~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
+++.|++ |+++|.+|..|+||||+||..|+..+|++|+..|+++|.+| ..|+||||+|+..|+.++| ++|++.++.+
T Consensus 60 ~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v-~~Ll~~ga~~ 137 (244)
T 3ui2_A 60 ALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVV-EALVELGADI 137 (244)
T ss_dssp HHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHH-HHHHHTTCCT
T ss_pred HHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHH-HHHHHCCCCC
Confidence 4666777 89999999999999999999999999999999999999998 8899999999999999998 8888876643
No 31
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.19 E-value=6.3e-11 Score=111.65 Aligned_cols=76 Identities=26% Similarity=0.262 Sum_probs=70.8
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.+++ ++|++.+
T Consensus 94 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~-~~L~~~G 169 (169)
T 2y1l_E 94 EIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLA-EILQKLN 169 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHTC-
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHH-HHHHHcC
Confidence 467778889999999999999999999999999999999999999999999999999999999999998 8887753
No 32
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.19 E-value=6.5e-11 Score=110.72 Aligned_cols=75 Identities=17% Similarity=0.207 Sum_probs=58.4
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++..
T Consensus 84 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~-~~L~~~~ 158 (167)
T 3v31_A 84 IVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQ-QVIESHL 158 (167)
T ss_dssp HHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHHH
T ss_pred HHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHH-HHHHHHH
Confidence 45566667888888888888888888888888888888888888888888888888888888888887 6665543
No 33
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.18 E-value=4.7e-11 Score=119.70 Aligned_cols=79 Identities=20% Similarity=0.130 Sum_probs=72.4
Q ss_pred HHHHHHHhCCCCCCccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDG-GQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~-G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.++.. |+||||+|+..|+.++|++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 172 ~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v-~~Ll~~ga~ 250 (282)
T 1oy3_D 172 EMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA-RLLRAHGAP 250 (282)
T ss_dssp HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHH-HHHHHcCCC
Confidence 4566777889999998854 99999999999999999999999999999999999999999999999999 888888775
Q ss_pred C
Q 005246 705 I 705 (706)
Q Consensus 705 i 705 (706)
+
T Consensus 251 ~ 251 (282)
T 1oy3_D 251 E 251 (282)
T ss_dssp C
T ss_pred c
Confidence 4
No 34
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.17 E-value=8.4e-11 Score=103.47 Aligned_cols=77 Identities=30% Similarity=0.376 Sum_probs=70.8
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++.
T Consensus 17 ~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~-~~Ll~~g~~ 93 (126)
T 1n0r_A 17 VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV-KLLLEAGAD 93 (126)
T ss_dssp HHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHH-HHHHHcCCC
Confidence 45666777999999999999999999999999999999999999999999999999999999999999 888877654
No 35
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.17 E-value=6.7e-11 Score=113.35 Aligned_cols=74 Identities=22% Similarity=0.279 Sum_probs=54.7
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.
T Consensus 116 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v-~~Ll~~ 189 (192)
T 2rfm_A 116 MSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVI-KIFTEV 189 (192)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHH-HHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHH-HHHHhc
Confidence 45566667777777777777777777777777777777777777777777777777777777777777 555543
No 36
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.17 E-value=3.2e-11 Score=112.40 Aligned_cols=77 Identities=23% Similarity=0.244 Sum_probs=70.8
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCc-HHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRT-ALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~T-PLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|+||||+|+ .|+.+++++|+..|++++.+|..|+| |||+|+..|+.++| ++|++.++.
T Consensus 26 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v-~~Ll~~ga~ 103 (156)
T 1bi7_B 26 EEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTL-VVLHRAGAR 103 (156)
T ss_dssp HHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHH-HHHHHHTCC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHH-HHHHHcCCC
Confidence 4567788899999999999999999986 99999999999999999999999999 99999999999999 888877654
No 37
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.17 E-value=9e-11 Score=119.37 Aligned_cols=88 Identities=22% Similarity=0.155 Sum_probs=75.9
Q ss_pred HHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 005246 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGC 693 (706)
Q Consensus 614 LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~ei 693 (706)
|+.++....+ .+++.|++.|+++|..|..|.||||+||..|+.++|++|+..|++++.+|..|+||||+|+..|+.++
T Consensus 44 l~~A~~~g~~--~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~ 121 (299)
T 1s70_B 44 FLAACSSGDT--EEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDI 121 (299)
T ss_dssp HHHHHHHTCH--HHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCH--HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHH
Confidence 3444444333 34667788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCC
Q 005246 694 YLEVLIKFLIY 704 (706)
Q Consensus 694 Va~LLle~~~~ 704 (706)
| ++|++.++.
T Consensus 122 v-~~Ll~~g~~ 131 (299)
T 1s70_B 122 A-EYLISQGAH 131 (299)
T ss_dssp H-HHHHHTTCC
T ss_pred H-HHHHhCCCC
Confidence 9 888877654
No 38
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.15 E-value=7e-11 Score=123.15 Aligned_cols=73 Identities=22% Similarity=0.141 Sum_probs=35.9
Q ss_pred HHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 630 KIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 630 kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~-GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.|++.|+++|.+|..|+||||+|+..|+..+++.|+.. |+++|.+|..|+||||+|+..|+.++| ++|++.++
T Consensus 224 lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv-~~Ll~~GA 297 (337)
T 4g8k_A 224 LLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA-ELLCKRGA 297 (337)
T ss_dssp HHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHH-HHHHTTSC
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHH-HHHHHCCC
Confidence 34444555555555555555555555555555544442 445555555555555555555555554 44444443
No 39
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.15 E-value=4.5e-11 Score=133.19 Aligned_cols=78 Identities=21% Similarity=0.116 Sum_probs=72.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|+++|.+|..|+||||+||..|+.++|++|+.+|+++|.+|..|+||||+|+..|+.+++ ++|++.++.
T Consensus 188 ~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~-~~Ll~~ga~ 265 (497)
T 3lvq_E 188 PLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECE-ELLEQAQAG 265 (497)
T ss_dssp HHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHH-HHHHHTCC-
T ss_pred HHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH-HHHHHhCCC
Confidence 467778888999999999999999999999999999999999999999999999999999999999998 888888764
No 40
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.14 E-value=6.2e-11 Score=111.40 Aligned_cols=79 Identities=23% Similarity=0.259 Sum_probs=72.1
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.+
T Consensus 50 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~ga~~ 128 (172)
T 3v30_A 50 ETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCV-EALLARGADL 128 (172)
T ss_dssp HHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTCCT
T ss_pred HHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHHcCCCc
Confidence 345667778999999999999999999999999999999999999999999999999999999999999 8888776543
No 41
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.14 E-value=8.1e-11 Score=100.38 Aligned_cols=61 Identities=30% Similarity=0.403 Sum_probs=55.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 644 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 644 ~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
+|+||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.++| ++|++.++.+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v-~~Ll~~ga~~ 61 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV-KLLLEAGADV 61 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTCCT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHH-HHHHHcCCCC
Confidence 489999999999999999999999999999999999999999999999999 8888877643
No 42
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.14 E-value=2e-10 Score=108.95 Aligned_cols=89 Identities=20% Similarity=0.191 Sum_probs=74.3
Q ss_pred HHHHHHHhHHHHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005246 614 LIQNLLRNRLCEWLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLG 692 (706)
Q Consensus 614 LLe~llk~kl~e~Lv~kLle~-GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~e 692 (706)
|+.++....+ .+++.|++. +.+++.+|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+
T Consensus 9 l~~A~~~g~~--~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 86 (179)
T 3f6q_A 9 IFTQCREGNA--VAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRD 86 (179)
T ss_dssp HHHHHHHTCH--HHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCH--HHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 3444444333 234555554 7789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCC
Q 005246 693 CYLEVLIKFLIYI 705 (706)
Q Consensus 693 iVa~LLle~~~~i 705 (706)
+| ++|++.++.+
T Consensus 87 ~v-~~Ll~~g~~~ 98 (179)
T 3f6q_A 87 IV-QKLLQYKADI 98 (179)
T ss_dssp HH-HHHHHTTCCT
T ss_pred HH-HHHHHcCCCC
Confidence 99 8888877643
No 43
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.14 E-value=1e-10 Score=112.04 Aligned_cols=78 Identities=23% Similarity=0.238 Sum_probs=71.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 82 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~ga~ 159 (192)
T 2rfm_A 82 GIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIV-KKLLELGAD 159 (192)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHHCCCC
Confidence 356667778999999999999999999999999999999999999999999999999999999999999 888877654
No 44
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.13 E-value=1e-10 Score=120.01 Aligned_cols=76 Identities=22% Similarity=0.157 Sum_probs=69.7
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~-~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
.+++.|++.|+++|.+|..|+||||+|+..|+.++|++|+. .|++++.+|..|+||||+|+..|+.++| ++|++..
T Consensus 197 ~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv-~~Ll~~~ 273 (276)
T 4hbd_A 197 DVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIA-SMLYSRM 273 (276)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHHC
T ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHH-HHHHhcc
Confidence 35677888999999999999999999999999999999999 8999999999999999999999999999 6666543
No 45
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.13 E-value=1.4e-10 Score=119.34 Aligned_cols=78 Identities=23% Similarity=0.193 Sum_probs=72.8
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|+++|.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 228 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v-~~Ll~~gad 305 (351)
T 3utm_A 228 QVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTC-RLLLSYGSD 305 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHH-HHHHHcCCC
Confidence 456677888999999999999999999999999999999999999999999999999999999999999 888888764
No 46
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.13 E-value=1.3e-10 Score=116.53 Aligned_cols=74 Identities=12% Similarity=0.013 Sum_probs=55.8
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.+|+ .+|..
T Consensus 171 ~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~-~~l~~ 244 (253)
T 1yyh_A 171 DAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV-RLLDL 244 (253)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH-HHHHC
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHH-HHHHH
Confidence 355666777777777777778888887777777777777777777777777788888888888887777 55543
No 47
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.13 E-value=1.4e-10 Score=107.22 Aligned_cols=72 Identities=18% Similarity=0.093 Sum_probs=67.8
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVL 698 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LL 698 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~-~~L 152 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLA-EIL 152 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH-HHh
Confidence 457778889999999999999999999999999999999999999999999999999999999999998 665
No 48
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.13 E-value=1.4e-10 Score=108.45 Aligned_cols=89 Identities=20% Similarity=0.244 Sum_probs=76.4
Q ss_pred HHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHH
Q 005246 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGC 693 (706)
Q Consensus 614 LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~ei 693 (706)
.|+.++...- ..+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++
T Consensus 39 ~L~~A~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 117 (167)
T 3v31_A 39 PLMWAAAHGQ-IAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKC 117 (167)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHCCC-HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 3444444322 345777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCC
Q 005246 694 YLEVLIKFLIY 704 (706)
Q Consensus 694 Va~LLle~~~~ 704 (706)
| ++|++.++.
T Consensus 118 v-~~Ll~~g~~ 127 (167)
T 3v31_A 118 V-KMLLESGAD 127 (167)
T ss_dssp H-HHHHHTTCC
T ss_pred H-HHHHHcCCC
Confidence 9 888877654
No 49
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.12 E-value=1.4e-10 Score=106.92 Aligned_cols=74 Identities=28% Similarity=0.218 Sum_probs=68.4
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHc
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKF 701 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~ 701 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+.. ++++.+|..|+||||+|+..|+.++| ++|++.
T Consensus 82 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v-~~Ll~~ 155 (156)
T 1bd8_A 82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLV-DILQGH 155 (156)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHH-HHHHTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHH-HHHHhh
Confidence 356778889999999999999999999999999999999999 99999999999999999999999999 777653
No 50
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.12 E-value=7.1e-11 Score=123.65 Aligned_cols=76 Identities=21% Similarity=0.140 Sum_probs=70.4
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
.+++.|++.|+++|.+|..|+||||+|+..|+.++|++|+..|++++.+|..|+||||+|+..|+.++| ++|++.+
T Consensus 207 ~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv-~~Ll~~g 282 (301)
T 2b0o_E 207 PLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECE-ELLEQAQ 282 (301)
T ss_dssp HHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHH-HHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH-HHHHHhc
Confidence 456677778999999999999999999999999999999999999999999999999999999999998 7777654
No 51
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.12 E-value=1.4e-10 Score=129.20 Aligned_cols=91 Identities=23% Similarity=0.287 Sum_probs=79.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCCCCcc------CCCCCcHHHHHHH---cCCHHHHHHHHHcCCCCcccCCCCCcHH
Q 005246 612 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVI------DDGGQGVVHLAAA---LGYEWAMRPIIATGVSPNFRDARGRTAL 682 (706)
Q Consensus 612 d~LLe~llk~kl~e~Lv~kLle~GadiN~~------D~~G~TpLHlAA~---lG~~~~V~~LL~~GadvN~rD~~G~TPL 682 (706)
..|+.++....+ ..++.|++.|+++|.. |..|+||||+|+. .|+.++|++|+..|+++|.+|..|+|||
T Consensus 134 ~~L~~A~~~g~~--~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 134 QRLWTAICNRDL--LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHTCH--HHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred HHHHHHHhccCH--HHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 456666666555 3467788999999987 8899999999966 8999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHcCCCC
Q 005246 683 HWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 683 H~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
|+||..|+.++| ++|++.++.+
T Consensus 212 h~A~~~g~~~~v-~~Ll~~ga~~ 233 (497)
T 3lvq_E 212 HYAALYNQPDCL-KLLLKGRALV 233 (497)
T ss_dssp HHHTTTTCHHHH-HHHHHTCCCC
T ss_pred HHHHHcCCHHHH-HHHHHcCCCC
Confidence 999999999999 8998887754
No 52
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.12 E-value=2.5e-10 Score=106.53 Aligned_cols=78 Identities=21% Similarity=0.232 Sum_probs=69.2
Q ss_pred HHHHHHh-CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 627 LVWKIHE-GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 627 Lv~kLle-~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
+++.|++ .+.+++..+..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.+
T Consensus 23 ~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~g~~~ 101 (165)
T 3twr_A 23 TVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVA-ELLVKHGAVV 101 (165)
T ss_dssp HHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTCCT
T ss_pred HHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHH-HHHHhCCCCC
Confidence 3455555 5677888899999999999999999999999999999999999999999999999999999 8888876643
No 53
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.11 E-value=2e-10 Score=111.89 Aligned_cols=78 Identities=23% Similarity=0.187 Sum_probs=71.0
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHH-HcCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGRLGCYLEVLI-KFLI 703 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~G-advN~rD~~G~TPLH~Aa~~Gh~eiVa~LLl-e~~~ 703 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..|+.++| ++|+ +.++
T Consensus 121 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v-~~Ll~~~ga 199 (228)
T 2dzn_A 121 EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAA-VLLVEKYGA 199 (228)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHH-HHHHHHHCC
T ss_pred hHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHH-HHHHHhcCC
Confidence 3566778889999999999999999999999999999999999 99999999999999999999999999 6666 6665
Q ss_pred C
Q 005246 704 Y 704 (706)
Q Consensus 704 ~ 704 (706)
.
T Consensus 200 ~ 200 (228)
T 2dzn_A 200 E 200 (228)
T ss_dssp C
T ss_pred C
Confidence 4
No 54
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.10 E-value=2.5e-10 Score=111.10 Aligned_cols=78 Identities=12% Similarity=0.042 Sum_probs=61.0
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.+++ ++|+++++.
T Consensus 139 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~-~~L~~~g~~ 216 (223)
T 2f8y_A 139 DAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV-RLLDEYNLV 216 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH-HHHHHTTCS
T ss_pred HHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHH-HHHHHcCCC
Confidence 345666777888888888888888888888888888888888888888888888888888888888887 777776653
No 55
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.10 E-value=1.9e-10 Score=104.49 Aligned_cols=68 Identities=28% Similarity=0.458 Sum_probs=61.4
Q ss_pred CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 635 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 635 GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
|+++ .+|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++.
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~-~~Ll~~g~~ 68 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV-ELLLQHKAL 68 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHH-HHHHHcCCc
Confidence 5677 6899999999999999999999999999999999999999999999999999999 888887664
No 56
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.10 E-value=2.4e-10 Score=115.32 Aligned_cols=74 Identities=20% Similarity=0.189 Sum_probs=39.6
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 628 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 628 v~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.+
T Consensus 19 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~g 92 (261)
T 2xai_A 19 LRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCV-NLLLQHG 92 (261)
T ss_dssp HHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHTT
T ss_pred HHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHHHCC
Confidence 3344444555555555555555555555555555555555555555555555555555555555555 4444443
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.09 E-value=2e-10 Score=117.74 Aligned_cols=78 Identities=22% Similarity=0.180 Sum_probs=70.5
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHH-cCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIK-FLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle-~~~~ 704 (706)
.+++.|++.|..++..|..|+||||+|+..|+.++|++|+..|+++|.+|..|+||||+|+..|+.++| ++|++ .++.
T Consensus 164 ~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv-~~Ll~~~gad 242 (276)
T 4hbd_A 164 ETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIA-GLLLAVPSCD 242 (276)
T ss_dssp HHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHTSTTCC
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHH-HHHHhcCCCC
Confidence 446667778888888999999999999999999999999999999999999999999999999999999 77777 5543
No 58
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.09 E-value=3.3e-10 Score=112.94 Aligned_cols=79 Identities=20% Similarity=0.113 Sum_probs=73.2
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIA-TGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~-~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 200 ~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~-~~Ll~~Ga~ 278 (285)
T 1wdy_A 200 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA-ELLCKRGAS 278 (285)
T ss_dssp HHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHHSSC
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHH-HHHHHcCCC
Confidence 45667778899999999999999999999999999999999 8999999999999999999999999998 889888775
Q ss_pred C
Q 005246 705 I 705 (706)
Q Consensus 705 i 705 (706)
+
T Consensus 279 ~ 279 (285)
T 1wdy_A 279 T 279 (285)
T ss_dssp S
T ss_pred C
Confidence 4
No 59
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.09 E-value=3.1e-10 Score=111.23 Aligned_cols=78 Identities=22% Similarity=0.148 Sum_probs=69.6
Q ss_pred HHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D-~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++..+ ..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 130 ~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~ga~ 208 (241)
T 1k1a_A 130 ETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLV-RTLVRSGAD 208 (241)
T ss_dssp HHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH-HHHHhcCCC
Confidence 45667788899999888 7899999999999999999999999999999999999999999999999998 888877664
No 60
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.08 E-value=4.3e-10 Score=116.31 Aligned_cols=90 Identities=14% Similarity=0.177 Sum_probs=73.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHhCCCCCC------ccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHH
Q 005246 613 KLIQNLLRNRLCEWLVWKIHEGGKGPN------VIDDGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTALH 683 (706)
Q Consensus 613 ~LLe~llk~kl~e~Lv~kLle~GadiN------~~D~~G~TpLHlAA~l---G~~~~V~~LL~~GadvN~rD~~G~TPLH 683 (706)
.|+.++....+. .+..++..|++++ ..|..|+||||+||.. |+..++++|+..|+++|.+|..|+||||
T Consensus 133 ~l~~a~~~~d~~--~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 133 SLCEAVKTRDIF--GLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHTTCHH--HHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhHhhhcccH--HHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 344444333332 3456778898854 4488999999999999 8999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHcCCCC
Q 005246 684 WASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 684 ~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
+|+..|+.++| ++|++.++.+
T Consensus 211 ~A~~~g~~~~v-~~Ll~~gad~ 231 (278)
T 1dcq_A 211 YCCLTDNAECL-KLLLRGKASI 231 (278)
T ss_dssp HHHHTTCHHHH-HHHHHTTCCT
T ss_pred HHHHcCCHHHH-HHHHHcCCCC
Confidence 99999999999 8888887653
No 61
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.07 E-value=4e-10 Score=109.61 Aligned_cols=78 Identities=22% Similarity=0.276 Sum_probs=72.5
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 106 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~ga~ 183 (223)
T 2f8y_A 106 GMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA-KVLLDHFAN 183 (223)
T ss_dssp HHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHH-HHHHHcCCC
Confidence 456778889999999999999999999999999999999999999999999999999999999999999 888887654
No 62
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.07 E-value=5.6e-11 Score=115.98 Aligned_cols=75 Identities=15% Similarity=0.055 Sum_probs=61.3
Q ss_pred HHHHHHHhCCCCCCccCCCCC-cHHHHHHHcCC-----HHHHHHHHH-cCCCCcccCCCCCcHHHHHHHcCCHHHHHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQ-GVVHLAAALGY-----EWAMRPIIA-TGVSPNFRDARGRTALHWASYFGRLGCYLEVL 698 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~-TpLHlAA~lG~-----~~~V~~LL~-~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LL 698 (706)
.+++.|++.|+++|.+|..|+ ||||+|+..++ ..++++|+. .|++++.+|..|+||||+|+..|+.++| ++|
T Consensus 95 ~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v-~~L 173 (186)
T 3t8k_A 95 ELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIAL-KMM 173 (186)
T ss_dssp HHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHH-HHH
T ss_pred HHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHH-HHH
Confidence 456777888889988888888 88998888554 457888888 8999999999999999999999998888 666
Q ss_pred HHc
Q 005246 699 IKF 701 (706)
Q Consensus 699 le~ 701 (706)
.++
T Consensus 174 ~~~ 176 (186)
T 3t8k_A 174 EDY 176 (186)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 63
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.07 E-value=4.1e-10 Score=110.17 Aligned_cols=75 Identities=27% Similarity=0.267 Sum_probs=42.7
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 628 VWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 628 v~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++
T Consensus 122 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~ga 196 (231)
T 3aji_A 122 AVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEA-KFLVTQGA 196 (231)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTC
T ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHH-HHHHHCCC
Confidence 3344445555555555555666665555555555555555555555555556666666555555555 55554443
No 64
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.07 E-value=1.8e-10 Score=115.15 Aligned_cols=77 Identities=19% Similarity=0.141 Sum_probs=69.5
Q ss_pred HHHHHHHhCCCCCCccC--------------CCCCcHHHHHHHcCCHHHHHHHHH---cCCCCcccCCCCCcHHHHHHHc
Q 005246 626 WLVWKIHEGGKGPNVID--------------DGGQGVVHLAAALGYEWAMRPIIA---TGVSPNFRDARGRTALHWASYF 688 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D--------------~~G~TpLHlAA~lG~~~~V~~LL~---~GadvN~rD~~G~TPLH~Aa~~ 688 (706)
.+++.|++.|++++.++ ..|+||||+|+..|+.++|++|+. .|++++.+|..|+||||+|+..
T Consensus 107 ~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 107 HYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAI 186 (260)
T ss_dssp HHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHh
Confidence 46778888999999998 689999999999999999999999 9999999999999999999998
Q ss_pred CC---------HHHHHHHHHHcCC
Q 005246 689 GR---------LGCYLEVLIKFLI 703 (706)
Q Consensus 689 Gh---------~eiVa~LLle~~~ 703 (706)
|+ .++| ++|++.++
T Consensus 187 ~~~~~~~~~~~~~~v-~~Ll~~ga 209 (260)
T 3jxi_A 187 ADNTRENTKFVTKMY-DLLLIKCA 209 (260)
T ss_dssp CCSSHHHHHHHHHHH-HHHHHHHH
T ss_pred ccCchhHHHHHHHHH-HHHHHhCc
Confidence 88 7888 77776643
No 65
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.07 E-value=3.9e-10 Score=116.11 Aligned_cols=90 Identities=19% Similarity=0.117 Sum_probs=75.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005246 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLG 692 (706)
Q Consensus 613 ~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~e 692 (706)
..|+.++...- ..+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+
T Consensus 60 t~L~~A~~~g~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 138 (351)
T 3utm_A 60 TPLHLAAGYNR-VRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVE 138 (351)
T ss_dssp CHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCC-HHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 34554444322 24577788889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCC
Q 005246 693 CYLEVLIKFLIY 704 (706)
Q Consensus 693 iVa~LLle~~~~ 704 (706)
+| ++|++.++.
T Consensus 139 ~v-~~Ll~~g~~ 149 (351)
T 3utm_A 139 VC-SLLLSHGAD 149 (351)
T ss_dssp HH-HHHHHTTCC
T ss_pred HH-HHHHHcCCC
Confidence 98 888877654
No 66
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.07 E-value=3e-10 Score=108.70 Aligned_cols=75 Identities=21% Similarity=0.280 Sum_probs=68.1
Q ss_pred HHHHHHhCC-CCCCccCCCCCcHHHHHHHcCC-----HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 627 LVWKIHEGG-KGPNVIDDGGQGVVHLAAALGY-----EWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 627 Lv~kLle~G-adiN~~D~~G~TpLHlAA~lG~-----~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
+++.|++.| ++++.+|..|+||||+|+..+. .+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++
T Consensus 121 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~-~~Ll~ 199 (201)
T 3hra_A 121 NVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEIS-KILAQ 199 (201)
T ss_dssp HHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHT
T ss_pred HHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHH-HHHHh
Confidence 456666667 8999999999999999999997 8999999999999999999999999999999999998 88887
Q ss_pred cC
Q 005246 701 FL 702 (706)
Q Consensus 701 ~~ 702 (706)
++
T Consensus 200 ~G 201 (201)
T 3hra_A 200 YN 201 (201)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 67
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.06 E-value=3.7e-10 Score=118.23 Aligned_cols=91 Identities=23% Similarity=0.303 Sum_probs=77.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCCCCc------cCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHH
Q 005246 612 DKLIQNLLRNRLCEWLVWKIHEGGKGPNV------IDDGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTAL 682 (706)
Q Consensus 612 d~LLe~llk~kl~e~Lv~kLle~GadiN~------~D~~G~TpLHlAA~l---G~~~~V~~LL~~GadvN~rD~~G~TPL 682 (706)
..|+.++....+. .+..+++.|++++. .+..|+||||+|+.. |+..++++|+..|+++|.+|..|+|||
T Consensus 153 ~~L~~A~~~g~~~--~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 153 QRLWTAICNRDLL--SVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp HHHHHHHHTTCHH--HHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred HHHhhhhhccCHH--HHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 4455555555443 35567789999997 689999999999997 899999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHcCCCC
Q 005246 683 HWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 683 H~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
|+|+..|+.++| ++|++.++.+
T Consensus 231 h~A~~~g~~~~v-~~Ll~~gad~ 252 (301)
T 2b0o_E 231 HYAALYNQPDCL-KLLLKGRALV 252 (301)
T ss_dssp HHHHHTTCHHHH-HHHHHTTCCC
T ss_pred HHHHHcCCHHHH-HHHHHcCCCC
Confidence 999999999999 8888887653
No 68
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.06 E-value=1e-10 Score=115.42 Aligned_cols=77 Identities=16% Similarity=0.091 Sum_probs=71.8
Q ss_pred HHHHHHhCCCCCCccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~-~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.|++++.++. .|.||||+|+..|+.++|++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++.
T Consensus 132 ~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~-~~Ll~~ga~ 209 (236)
T 1ikn_D 132 IVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQ-QQLGQLTLE 209 (236)
T ss_dssp HHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHH-HHHHTTSCG
T ss_pred HHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHH-HHHHHcchh
Confidence 56677778999999998 999999999999999999999999999999999999999999999999998 888888764
No 69
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.05 E-value=2.4e-10 Score=114.22 Aligned_cols=77 Identities=21% Similarity=0.121 Sum_probs=69.6
Q ss_pred HHHHHHHhCCCCCCccCCC-------------CCcHHHHHHHcCCHHHHHHHHH---cCCCCcccCCCCCcHHHHHHH--
Q 005246 626 WLVWKIHEGGKGPNVIDDG-------------GQGVVHLAAALGYEWAMRPIIA---TGVSPNFRDARGRTALHWASY-- 687 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~-------------G~TpLHlAA~lG~~~~V~~LL~---~GadvN~rD~~G~TPLH~Aa~-- 687 (706)
.+++.|++.|++++.+|.. |+||||+|+..|+.+++++|+. .|+++|.+|..|+||||+|+.
T Consensus 104 ~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~ 183 (256)
T 2etb_A 104 QCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIA 183 (256)
T ss_dssp HHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcc
Confidence 4577788899999999886 9999999999999999999999 999999999999999999999
Q ss_pred cCCHH-------HHHHHHHHcCC
Q 005246 688 FGRLG-------CYLEVLIKFLI 703 (706)
Q Consensus 688 ~Gh~e-------iVa~LLle~~~ 703 (706)
.++.+ +| ++|++.++
T Consensus 184 ~~~~~~~~~~~~iv-~~Ll~~ga 205 (256)
T 2etb_A 184 DNSPENSALVIHMY-DGLLQMGA 205 (256)
T ss_dssp CSCHHHHHHHHHHH-HHHHHHHH
T ss_pred cCCchhhHHHHHHH-HHHHHcCC
Confidence 78888 88 77776543
No 70
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.04 E-value=4.6e-10 Score=121.53 Aligned_cols=88 Identities=19% Similarity=0.142 Sum_probs=75.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005246 613 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLG 692 (706)
Q Consensus 613 ~LLe~llk~kl~e~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~e 692 (706)
..|+.++...- ..+++.|++.|+++|.+|..|+||||+|+..|+..+|++|+..|++++.+|..|+||||+|+..|+.+
T Consensus 237 TpLh~Aa~~g~-~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~ 315 (368)
T 3jue_A 237 TPLIQATAANS-LLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANAD 315 (368)
T ss_dssp CHHHHHHHTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHCCC-HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHH
Confidence 34444444332 24677888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 005246 693 CYLEVLIKFL 702 (706)
Q Consensus 693 iVa~LLle~~ 702 (706)
+| ++|++.+
T Consensus 316 iv-~lLl~~~ 324 (368)
T 3jue_A 316 IV-TLLRLAK 324 (368)
T ss_dssp HH-HHHHHHH
T ss_pred HH-HHHHHcC
Confidence 99 6766543
No 71
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.04 E-value=2.6e-10 Score=115.26 Aligned_cols=77 Identities=19% Similarity=0.147 Sum_probs=69.6
Q ss_pred HHHHHHHhCCCCCCccCC--------------CCCcHHHHHHHcCCHHHHHHHHH---cCCCCcccCCCCCcHHHHHHHc
Q 005246 626 WLVWKIHEGGKGPNVIDD--------------GGQGVVHLAAALGYEWAMRPIIA---TGVSPNFRDARGRTALHWASYF 688 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~--------------~G~TpLHlAA~lG~~~~V~~LL~---~GadvN~rD~~G~TPLH~Aa~~ 688 (706)
.+++.|++.|++++.++. .|.||||+|+..|+.++|++|+. .|++++.+|..|+||||+|+..
T Consensus 115 ~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 115 TLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp HHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHc
Confidence 457778889999999987 79999999999999999999999 9999999999999999999999
Q ss_pred CC---------HHHHHHHHHHcCC
Q 005246 689 GR---------LGCYLEVLIKFLI 703 (706)
Q Consensus 689 Gh---------~eiVa~LLle~~~ 703 (706)
|+ .++| ++|++.++
T Consensus 195 ~~~~~~~~~~~~~~v-~~Ll~~ga 217 (273)
T 2pnn_A 195 ADNTVDNTKFVTSMY-NEILILGA 217 (273)
T ss_dssp CCSCHHHHHHHHHHH-HHHHHHHH
T ss_pred cCcchhHHHHHHHHH-HHHHHhhh
Confidence 98 7888 77776543
No 72
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.04 E-value=6e-10 Score=109.41 Aligned_cols=77 Identities=21% Similarity=0.184 Sum_probs=57.1
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.++| ++|++.++.
T Consensus 126 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~gad 202 (237)
T 3b7b_A 126 LVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCV-VLFLSRDSD 202 (237)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHH-HHHHTTTCC
T ss_pred HHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHH-HHHHHcCCC
Confidence 45556667777777777777777777777777777777777777777777777777777777777777 666666543
No 73
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.03 E-value=5.9e-10 Score=114.48 Aligned_cols=77 Identities=19% Similarity=0.161 Sum_probs=58.3
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.|++++.+|..|+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 74 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~g~~ 150 (285)
T 3d9h_A 74 SLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCV-NLLLQHGAS 150 (285)
T ss_dssp HHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHH-HHHHHCCCC
Confidence 45556667777777777888888888888888888888888888888888888888888888888877 666665543
No 74
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.03 E-value=4.2e-10 Score=110.34 Aligned_cols=77 Identities=16% Similarity=0.122 Sum_probs=69.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHH----HHHHHcCCCC------cccCCCCCcHHHHHHHcCCHHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAM----RPIIATGVSP------NFRDARGRTALHWASYFGRLGCYL 695 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V----~~LL~~Gadv------N~rD~~G~TPLH~Aa~~Gh~eiVa 695 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++ ++|+..|+++ +.+|..|+||||+|+..|+.++|
T Consensus 135 ~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v- 213 (232)
T 2rfa_A 135 EIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMF- 213 (232)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHH-
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHH-
Confidence 457778889999999999999999999999999988 9999999998 68999999999999999999999
Q ss_pred HHHHHcCC
Q 005246 696 EVLIKFLI 703 (706)
Q Consensus 696 ~LLle~~~ 703 (706)
++|++.++
T Consensus 214 ~~Ll~~g~ 221 (232)
T 2rfa_A 214 QHLMQKRK 221 (232)
T ss_dssp HHHHHHHH
T ss_pred HHHHhcCc
Confidence 77776543
No 75
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.03 E-value=9.7e-10 Score=105.17 Aligned_cols=76 Identities=16% Similarity=0.070 Sum_probs=63.1
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPII-ATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL-~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+ ..+++++.+|..|+||||+|+..|+.++| ++|++.+
T Consensus 53 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~g 129 (201)
T 3hra_A 53 EIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNV-KLLLEDG 129 (201)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHH-HHHHHHC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHH-HHHHHcC
Confidence 4567777888888888888888888888888888888888 56778888888888888888888888888 6666655
No 76
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.03 E-value=3.3e-10 Score=119.34 Aligned_cols=77 Identities=12% Similarity=0.063 Sum_probs=61.5
Q ss_pred HHHHHHHhCCCC-----CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 626 WLVWKIHEGGKG-----PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 626 ~Lv~kLle~Gad-----iN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
.+++.|++.|++ ++..|..|.||||+||..|+.++|++|+.+|++++.+|..|+||||+|+..|+.++| ++|++
T Consensus 187 ~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v-~~Ll~ 265 (364)
T 3ljn_A 187 EALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLT-KELLQ 265 (364)
T ss_dssp HHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHH-HHHHH
T ss_pred HHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHH-HHHHH
Confidence 456667777777 888888888888888888888888888888888888888888888888888888887 66666
Q ss_pred cCC
Q 005246 701 FLI 703 (706)
Q Consensus 701 ~~~ 703 (706)
.++
T Consensus 266 ~~~ 268 (364)
T 3ljn_A 266 KTD 268 (364)
T ss_dssp HSC
T ss_pred cCC
Confidence 543
No 77
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.03 E-value=1.7e-10 Score=115.38 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=69.0
Q ss_pred HHHHHHHh---CCCCCCccCCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCC-------cccCCCCCcHHHHHH
Q 005246 626 WLVWKIHE---GGKGPNVIDDGGQGVVHLAAALGY---------EWAMRPIIATGVSP-------NFRDARGRTALHWAS 686 (706)
Q Consensus 626 ~Lv~kLle---~GadiN~~D~~G~TpLHlAA~lG~---------~~~V~~LL~~Gadv-------N~rD~~G~TPLH~Aa 686 (706)
.+++.|++ .|++++.+|..|+||||+||..|+ ..++++|+..|+++ +.+|..|+||||+|+
T Consensus 154 ~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~ 233 (260)
T 3jxi_A 154 HIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAA 233 (260)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHH
T ss_pred HHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHH
Confidence 46777888 899999999999999999999888 68999999999999 779999999999999
Q ss_pred HcCCHHHHHHHHHHcC
Q 005246 687 YFGRLGCYLEVLIKFL 702 (706)
Q Consensus 687 ~~Gh~eiVa~LLle~~ 702 (706)
..|+.++| ++|++.+
T Consensus 234 ~~g~~~~v-~~Ll~~g 248 (260)
T 3jxi_A 234 KTGKIGIF-QHIIRRE 248 (260)
T ss_dssp HTTCHHHH-HHHHHHH
T ss_pred HcCCHHHH-HHHHHhC
Confidence 99999999 7777654
No 78
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.02 E-value=5.9e-10 Score=109.29 Aligned_cols=78 Identities=18% Similarity=0.069 Sum_probs=70.1
Q ss_pred HHHHHHhC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-----cccCCCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 627 LVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSP-----NFRDARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 627 Lv~kLle~-GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~Gadv-----N~rD~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
+++.|++. |++++.+|..|+||||+||..|+.+++++|+..|+++ +.+|..|+||||+|+..|+.++| ++|++
T Consensus 18 ~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~ 96 (232)
T 2rfa_A 18 ALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLV-RALLA 96 (232)
T ss_dssp HHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHH-HHHHH
T ss_pred HHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHH-HHHHh
Confidence 45667776 9999999999999999999999999999999999987 77888999999999999999999 88887
Q ss_pred cCCCC
Q 005246 701 FLIYI 705 (706)
Q Consensus 701 ~~~~i 705 (706)
.++.+
T Consensus 97 ~g~~~ 101 (232)
T 2rfa_A 97 RGASV 101 (232)
T ss_dssp TTCCT
T ss_pred CCCCC
Confidence 76543
No 79
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.02 E-value=2.2e-10 Score=115.81 Aligned_cols=77 Identities=18% Similarity=0.219 Sum_probs=70.3
Q ss_pred HHHHHHHh---CCCCCCccCCCCCcHHHHHHHcCC---------HHHHHHHHHcCCCCc-------ccCCCCCcHHHHHH
Q 005246 626 WLVWKIHE---GGKGPNVIDDGGQGVVHLAAALGY---------EWAMRPIIATGVSPN-------FRDARGRTALHWAS 686 (706)
Q Consensus 626 ~Lv~kLle---~GadiN~~D~~G~TpLHlAA~lG~---------~~~V~~LL~~GadvN-------~rD~~G~TPLH~Aa 686 (706)
.+++.|++ .|++++.+|..|+||||+|+..|+ ..++++|+..|+++| .+|..|+||||+|+
T Consensus 162 ~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~ 241 (273)
T 2pnn_A 162 AIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAA 241 (273)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHH
T ss_pred HHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHH
Confidence 45777888 899999999999999999999998 789999999999997 49999999999999
Q ss_pred HcCCHHHHHHHHHHcCC
Q 005246 687 YFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 687 ~~Gh~eiVa~LLle~~~ 703 (706)
..|+.++| ++|++.++
T Consensus 242 ~~g~~~iv-~~Ll~~ga 257 (273)
T 2pnn_A 242 SSGKIGVL-AYILQREI 257 (273)
T ss_dssp HTTCHHHH-HHHHHHHT
T ss_pred HhChHHHH-HHHHHCCC
Confidence 99999999 88887665
No 80
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.02 E-value=2.3e-10 Score=114.35 Aligned_cols=76 Identities=16% Similarity=0.149 Sum_probs=69.6
Q ss_pred HHHHHHHh---CCCCCCccCCCCCcHHHHHHH--cCCHH-------HHHHHHHcCCCC-------cccCCCCCcHHHHHH
Q 005246 626 WLVWKIHE---GGKGPNVIDDGGQGVVHLAAA--LGYEW-------AMRPIIATGVSP-------NFRDARGRTALHWAS 686 (706)
Q Consensus 626 ~Lv~kLle---~GadiN~~D~~G~TpLHlAA~--lG~~~-------~V~~LL~~Gadv-------N~rD~~G~TPLH~Aa 686 (706)
.+++.|++ .|+++|.+|..|+||||+|+. .++.+ ++++|+..|+++ +.+|..|+||||+|+
T Consensus 150 ~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~ 229 (256)
T 2etb_A 150 DVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAA 229 (256)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHH
T ss_pred HHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHH
Confidence 45777888 899999999999999999999 77887 999999999999 999999999999999
Q ss_pred HcCCHHHHHHHHHHcC
Q 005246 687 YFGRLGCYLEVLIKFL 702 (706)
Q Consensus 687 ~~Gh~eiVa~LLle~~ 702 (706)
..|+.++| ++|++.+
T Consensus 230 ~~g~~~~v-~~Ll~~g 244 (256)
T 2etb_A 230 KEGKIEIF-RHILQRE 244 (256)
T ss_dssp HTTCHHHH-HHHHHHH
T ss_pred HhCCHHHH-HHHHhCC
Confidence 99999999 7777654
No 81
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.02 E-value=9e-10 Score=107.28 Aligned_cols=76 Identities=24% Similarity=0.237 Sum_probs=70.7
Q ss_pred HHHHHHHhCC--CCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 626 WLVWKIHEGG--KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~G--adiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
.+++.|++.| ++++..|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.+
T Consensus 86 ~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~g 163 (228)
T 2dzn_A 86 EVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLI-ELLCGLG 163 (228)
T ss_dssp HHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH-HHHHTTT
T ss_pred HHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHH-HHHHhcC
Confidence 3567788888 88999999999999999999999999999999999999999999999999999999999 8888776
No 82
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.01 E-value=5.5e-10 Score=120.33 Aligned_cols=77 Identities=17% Similarity=0.125 Sum_probs=51.9
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.|++++.+|..|+||||+|+..|+.++|++|+..|+++|.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 293 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv-~~Ll~~ga~ 369 (437)
T 1n11_A 293 VADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIV-TLLLKNGAS 369 (437)
T ss_dssp HHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTCC
T ss_pred HHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHH-HHHHHCcCC
Confidence 34455556667776677777777777777777777777777777777777777777777777777776 666665543
No 83
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.01 E-value=3.5e-10 Score=119.11 Aligned_cols=79 Identities=16% Similarity=0.225 Sum_probs=72.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCCcHHHHHHHcCCHHHHHHHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS-----PNFRDARGRTALHWASYFGRLGCYLEVLIK 700 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~Gad-----vN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle 700 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.++|++|+..|++ +|.+|..|+||||+|+..|+.++| ++|++
T Consensus 154 ~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v-~~Ll~ 232 (364)
T 3ljn_A 154 EMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVA-MRFVE 232 (364)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHH-HHHHT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHH-HHHHH
Confidence 456677778999999999999999999999999999999999999 999999999999999999999999 88888
Q ss_pred cCCCC
Q 005246 701 FLIYI 705 (706)
Q Consensus 701 ~~~~i 705 (706)
.++.+
T Consensus 233 ~gad~ 237 (364)
T 3ljn_A 233 MGIDV 237 (364)
T ss_dssp TTCCT
T ss_pred cCCCC
Confidence 87653
No 84
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.01 E-value=7e-10 Score=111.24 Aligned_cols=78 Identities=22% Similarity=0.276 Sum_probs=72.5
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 138 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v-~~Ll~~ga~ 215 (253)
T 1yyh_A 138 GMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA-KVLLDHFAN 215 (253)
T ss_dssp SHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHH-HHHHHcCCC
Confidence 356677788999999999999999999999999999999999999999999999999999999999999 888887764
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.01 E-value=1.2e-10 Score=113.57 Aligned_cols=79 Identities=6% Similarity=-0.016 Sum_probs=67.6
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHH------cCCHHHHHHHHHcCCCCcccCCCCC-cHHHHHHHcCC-----HHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAA------LGYEWAMRPIIATGVSPNFRDARGR-TALHWASYFGR-----LGC 693 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~------lG~~~~V~~LL~~GadvN~rD~~G~-TPLH~Aa~~Gh-----~ei 693 (706)
.+++.|++.|+++|.+|..|+||||+|+. .+..+++++|+.+|+++|.+|..|+ ||||+|+..|. .++
T Consensus 56 ~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~i 135 (186)
T 3t8k_A 56 KISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPL 135 (186)
T ss_dssp HHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHH
Confidence 35667788999999999999999999874 6667899999999999999999999 99999999554 567
Q ss_pred HHHHHHH-cCCCC
Q 005246 694 YLEVLIK-FLIYI 705 (706)
Q Consensus 694 Va~LLle-~~~~i 705 (706)
+ ++|++ .++.+
T Consensus 136 v-~~Ll~~~gad~ 147 (186)
T 3t8k_A 136 Y-KLIFSQSGLQL 147 (186)
T ss_dssp H-HHHHTSTTCCT
T ss_pred H-HHHHHhcCCCC
Confidence 7 88887 66543
No 86
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.00 E-value=1.1e-09 Score=107.10 Aligned_cols=78 Identities=22% Similarity=0.259 Sum_probs=65.4
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++.
T Consensus 87 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v-~~Ll~~g~~ 164 (231)
T 3aji_A 87 EIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV-HILLFYKAS 164 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH-HHHHhcCCC
Confidence 356677778888888888888888888888888888888888888888888888999998888888888 777776654
No 87
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.00 E-value=3.2e-10 Score=113.54 Aligned_cols=76 Identities=28% Similarity=0.286 Sum_probs=68.3
Q ss_pred HHHHHHhCCCC---CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 627 LVWKIHEGGKG---PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 627 Lv~kLle~Gad---iN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
+++.|++.|++ ++.+|..|+||||+||..|+.+++++|+.+|++++.+|..|+||||+|+..|+.++| ++|++.++
T Consensus 24 ~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v-~~Ll~~~~ 102 (282)
T 1oy3_D 24 FLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCA-CVLLQPRP 102 (282)
T ss_dssp HHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHH-HHHSSSCC
T ss_pred HHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchh-HhhhccCC
Confidence 45566666777 788999999999999999999999999999999999999999999999999999999 77776543
No 88
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=98.99 E-value=9.1e-10 Score=111.09 Aligned_cols=78 Identities=13% Similarity=-0.020 Sum_probs=69.2
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|+++|. |..|+||||+|+..|+.++| ++|++.++.+
T Consensus 115 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v-~~Ll~~gad~ 192 (261)
T 2xai_A 115 ECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELA-CLLMDFGADT 192 (261)
T ss_dssp HHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHH-HHHHHTTCCT
T ss_pred HHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHH-HHHHHcCCCC
Confidence 356777888999999999999999999999999999999999999995 88999999999999999998 8888877643
No 89
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=98.99 E-value=4e-10 Score=118.31 Aligned_cols=70 Identities=14% Similarity=0.172 Sum_probs=64.6
Q ss_pred HHHHHHHHhCCCCCCc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCC---HHHH
Q 005246 625 EWLVWKIHEGGKGPNV-IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR---LGCY 694 (706)
Q Consensus 625 e~Lv~kLle~GadiN~-~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh---~eiV 694 (706)
..+++.|++.|+++|. +|..|+||||+||..|+.++|++|+..|++++.+|..|+||||+|+..|+ .+++
T Consensus 110 ~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~ 183 (327)
T 1sw6_A 110 QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTF 183 (327)
T ss_dssp HHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCH
T ss_pred HHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHH
Confidence 3566778889999999 89999999999999999999999999999999999999999999999998 5665
No 90
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.99 E-value=1.1e-09 Score=108.11 Aligned_cols=78 Identities=23% Similarity=0.280 Sum_probs=69.1
Q ss_pred HHHHHHhCCCC------CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcCCHHHHHHHHH
Q 005246 627 LVWKIHEGGKG------PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA-RGRTALHWASYFGRLGCYLEVLI 699 (706)
Q Consensus 627 Lv~kLle~Gad------iN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~-~G~TPLH~Aa~~Gh~eiVa~LLl 699 (706)
+++.|++.|++ ++..+..|.||||+|+..|+.+++++|+..|++++.+|. .|+||||+|+..|+.++| ++|+
T Consensus 93 ~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v-~~Ll 171 (236)
T 1ikn_D 93 SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLV-SLLL 171 (236)
T ss_dssp HHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHH-HHHH
T ss_pred HHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHH-HHHH
Confidence 45667777765 466788999999999999999999999999999999997 999999999999999999 8888
Q ss_pred HcCCCC
Q 005246 700 KFLIYI 705 (706)
Q Consensus 700 e~~~~i 705 (706)
+.++.+
T Consensus 172 ~~ga~~ 177 (236)
T 1ikn_D 172 KCGADV 177 (236)
T ss_dssp TTTCCS
T ss_pred HcCCCC
Confidence 877643
No 91
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.99 E-value=7.8e-10 Score=119.73 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=72.0
Q ss_pred HHHHHHhCCCCCCccC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVID--DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D--~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.|+++|..+ ..|.||||+||..|+..+|++|+..|+++|.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 215 ~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v-~~LL~~Gad 293 (368)
T 3jue_A 215 TMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLA-CLFLKRGAD 293 (368)
T ss_dssp HHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHH-HHHHHCcCC
Confidence 4566778899999988 8999999999999999999999999999999999999999999999999999 888888765
Q ss_pred C
Q 005246 705 I 705 (706)
Q Consensus 705 i 705 (706)
+
T Consensus 294 ~ 294 (368)
T 3jue_A 294 L 294 (368)
T ss_dssp T
T ss_pred C
Confidence 3
No 92
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.99 E-value=1.7e-09 Score=105.99 Aligned_cols=76 Identities=24% Similarity=0.267 Sum_probs=45.2
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGV----SPNFRDARGRTALHWASYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~Ga----dvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~ 702 (706)
+++.|++.|++++.+|..|.||||+|+..|+.++++.|+..|+ +++.+|..|+||||+|+..|+.+++ ++|++.+
T Consensus 61 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~-~~Ll~~g 139 (241)
T 1k1a_A 61 VVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV-QLLLERG 139 (241)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHH-HHHHHTT
T ss_pred HHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHH-HHHHHcC
Confidence 3445555566666666666666666666666666666666654 5556666666666666666666665 5555544
Q ss_pred C
Q 005246 703 I 703 (706)
Q Consensus 703 ~ 703 (706)
+
T Consensus 140 ~ 140 (241)
T 1k1a_A 140 A 140 (241)
T ss_dssp C
T ss_pred C
Confidence 3
No 93
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=98.98 E-value=7.9e-10 Score=113.51 Aligned_cols=79 Identities=20% Similarity=0.211 Sum_probs=68.2
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
.+++.|++.|++++.++..|.||+|+|+..++..++++|+..|+++|.+|..|+||||+||..|+.++| ++|++.++.|
T Consensus 100 ~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v-~~Ll~~gadv 178 (269)
T 4b93_B 100 DLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELV-ALLLQHGASI 178 (269)
T ss_dssp THHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGH-HHHHHTTCCT
T ss_pred HHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH-HHHHHCCCCC
Confidence 356677788888888888889999999988999999999999999999999999999999999999998 8888877643
No 94
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.98 E-value=8.6e-10 Score=117.74 Aligned_cols=76 Identities=21% Similarity=0.162 Sum_probs=68.7
Q ss_pred HHHHHHh-CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 627 LVWKIHE-GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 627 Lv~kLle-~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
+++.|++ .|++++.+|..|+||||+|+..|+.++|++|+..|++++.+|..|+||||+|+..|+.++| ++|+++++
T Consensus 294 ~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv-~~Ll~~~a 370 (373)
T 2fo1_E 294 IVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIV-DIFDRCRP 370 (373)
T ss_dssp HHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHH-HHHHTTC-
T ss_pred HHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHH-HHHHhcCc
Confidence 3445554 4599999999999999999999999999999999999999999999999999999999999 88888765
No 95
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.97 E-value=6.9e-10 Score=97.98 Aligned_cols=66 Identities=23% Similarity=0.247 Sum_probs=58.4
Q ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 639 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 639 N~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
...|.+|.|+||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v-~~Ll~~ga~~ 83 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVV-KLLLEAGADV 83 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH-HHHHHTTCCT
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH-HHHHHcCCCc
Confidence 44688999999999999999999999999999999999999999999999999999 8888876643
No 96
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.97 E-value=1.7e-09 Score=107.77 Aligned_cols=78 Identities=23% Similarity=0.199 Sum_probs=71.5
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++.
T Consensus 53 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~-~~Ll~~g~~ 130 (285)
T 1wdy_A 53 DIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL-KFLYKRGAN 130 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHH-HHHHHhCCC
Confidence 356677788999999999999999999999999999999999999999999999999999999999999 777776553
No 97
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.97 E-value=8.9e-10 Score=113.32 Aligned_cols=77 Identities=14% Similarity=0.153 Sum_probs=66.8
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC-CcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARG-RTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G-~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..| .||||+|+..|+.++| ++|++.++.
T Consensus 77 ~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v-~~Ll~~g~~ 154 (285)
T 3kea_A 77 IVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIV-SYFLSEIPS 154 (285)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHH-HHHHTTSCT
T ss_pred HHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHH-HHHHhCCCc
Confidence 4566777899999999999999999999999999999999999999999999 6999999999999998 777776653
No 98
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.96 E-value=6.2e-10 Score=114.51 Aligned_cols=76 Identities=22% Similarity=0.270 Sum_probs=68.7
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++..| |+||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++.
T Consensus 45 ~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v-~~Ll~~ga~ 120 (285)
T 3kea_A 45 RLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTV-KLFVKKNWR 120 (285)
T ss_dssp HHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHHCGG
T ss_pred HHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHH-HHHHhcCCC
Confidence 35677788899998774 99999999999999999999999999999999999999999999999999 888776653
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.96 E-value=4.8e-10 Score=100.07 Aligned_cols=66 Identities=14% Similarity=0.039 Sum_probs=59.5
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRL 691 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~ 691 (706)
.+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..+..
T Consensus 54 ~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 119 (123)
T 3aaa_C 54 EILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIK 119 (123)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHH
T ss_pred HHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHH
Confidence 356778889999999999999999999999999999999999999999999999999999543333
No 100
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=98.96 E-value=1.4e-09 Score=117.26 Aligned_cols=76 Identities=20% Similarity=0.236 Sum_probs=56.3
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
+++.|++.|++++.+|..|+||||+||..|+.++|++|+..|++++.+|..|+||||+|+..|+.++| ++|++.++
T Consensus 62 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v-~~Ll~~~~ 137 (437)
T 1n11_A 62 VAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETV-LALLEKEA 137 (437)
T ss_dssp HHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHH-HHHHHTTC
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHH-HHHHhCCC
Confidence 45566666777777777777777777777777777777777777777777777777777777777777 55555443
No 101
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.96 E-value=2.8e-10 Score=114.04 Aligned_cols=77 Identities=19% Similarity=0.119 Sum_probs=70.1
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHH--HHcCCHHHHHHHHHHcC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWA--SYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD-~~G~TPLH~A--a~~Gh~eiVa~LLle~~ 702 (706)
.+++.|++.|++++.+|..|+||||+||..|+.+++++|+..|++++.+| ..|+||||+| +..|+.+++ ++|++.+
T Consensus 68 ~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v-~~Ll~~g 146 (229)
T 2vge_A 68 SIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCA-TYLADVE 146 (229)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHH-HHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHH-HHHHHcC
Confidence 35667788899999999999999999999999999999999999999997 6999999999 999999999 7777754
Q ss_pred C
Q 005246 703 I 703 (706)
Q Consensus 703 ~ 703 (706)
+
T Consensus 147 a 147 (229)
T 2vge_A 147 Q 147 (229)
T ss_dssp H
T ss_pred C
Confidence 3
No 102
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.95 E-value=1.1e-09 Score=104.70 Aligned_cols=63 Identities=27% Similarity=0.316 Sum_probs=58.6
Q ss_pred HHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Q 005246 626 WLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 688 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D-~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~ 688 (706)
.+++.|++.|++++.+| ..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..
T Consensus 90 ~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 90 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 35677888999999998 8999999999999999999999999999999999999999999876
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=98.94 E-value=3.5e-10 Score=111.04 Aligned_cols=77 Identities=17% Similarity=0.112 Sum_probs=65.9
Q ss_pred HHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 626 WLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 626 ~Lv~kLle~-GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
.+++.|++. |++++.+|..|+||||+|+..|+.++|++|+.+|++++.+|..|+||||+|+..|+.+++ ++|++.++
T Consensus 120 ~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l-~~l~~~~~ 197 (222)
T 3ehr_A 120 DIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLL-KKKQGTDA 197 (222)
T ss_dssp HHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHH-C-------
T ss_pred HHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHH-HHHhccch
Confidence 356677777 999999999999999999999999999999999999999999999999999999999998 66665443
No 104
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=98.94 E-value=7.7e-10 Score=97.36 Aligned_cols=65 Identities=23% Similarity=0.248 Sum_probs=60.5
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 640 VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 640 ~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
.+|..|+||||+||..|..++++.|+..|++++.+|..|+||||+|+..|+.+++ ++|++.++.+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~-~~Ll~~g~~~ 68 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV-KLLLAKGADV 68 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHH-HHHTTTTCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHH-HHHHHcCCCC
Confidence 4789999999999999999999999999999999999999999999999999998 8888776643
No 105
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.93 E-value=2.3e-09 Score=111.69 Aligned_cols=72 Identities=18% Similarity=0.063 Sum_probs=64.5
Q ss_pred HHHHHh-CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 628 VWKIHE-GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 628 v~kLle-~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
++.|+. .|+++|.+|..|+||||+|+..|+.++|++|+.+|+++|.+ ||||+|+..|+.++| ++|++.++.+
T Consensus 255 v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv-~~Ll~~GA~~ 327 (337)
T 4g8k_A 255 VQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYDHSLV-KVLLSHGAKE 327 (337)
T ss_dssp HHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHH-HHHHHTTCCC
T ss_pred HHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHH-HHHHHCcCCC
Confidence 445555 58999999999999999999999999999999999999864 599999999999999 9999988753
No 106
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.93 E-value=1.6e-09 Score=109.08 Aligned_cols=75 Identities=27% Similarity=0.278 Sum_probs=67.6
Q ss_pred HHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHH----------------Hc
Q 005246 626 WLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWAS----------------YF 688 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D-~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa----------------~~ 688 (706)
.+++.|++.|++++.+| ..|+||||+||..|+.++|++|+.+|++++.+|..|+||||+|+ ..
T Consensus 91 ~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~ 170 (244)
T 3ui2_A 91 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI 170 (244)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHc
Confidence 45778888999999998 88999999999999999999999999999999999999999998 66
Q ss_pred CCHHHHHHHHHHc
Q 005246 689 GRLGCYLEVLIKF 701 (706)
Q Consensus 689 Gh~eiVa~LLle~ 701 (706)
|+.+++ ++|++.
T Consensus 171 g~~~iv-~~L~~~ 182 (244)
T 3ui2_A 171 GLEKVI-NVLEGQ 182 (244)
T ss_dssp HHHHHH-HHHHHH
T ss_pred ChHHHH-HHHHHh
Confidence 889998 776653
No 107
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=98.93 E-value=2.4e-09 Score=109.92 Aligned_cols=76 Identities=13% Similarity=-0.009 Sum_probs=65.6
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 627 LVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
+++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++. |..|+||||+|+..|+.++| ++|++.++.
T Consensus 172 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v-~~Ll~~gad 247 (285)
T 3d9h_A 172 CVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELA-CLLMDFGAD 247 (285)
T ss_dssp HHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHH-HHHHHCCCC
Confidence 56677788899998999999999999999999999999999999984 88899999999999999998 777777654
No 108
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.92 E-value=5.2e-10 Score=111.77 Aligned_cols=76 Identities=18% Similarity=0.083 Sum_probs=68.7
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-cHHHHH--HHcCCHHHHHHHHHHcC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGR-TALHWA--SYFGRLGCYLEVLIKFL 702 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~-TPLH~A--a~~Gh~eiVa~LLle~~ 702 (706)
.+++.|++.|+++|.+|..|+||||+||..|+.+++++|+.+|++++.+|..|. ||||+| +..|+.+|| ++|++.+
T Consensus 84 ~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~-~~Ll~~~ 162 (239)
T 1ycs_B 84 EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCS-QFLYGVQ 162 (239)
T ss_dssp HHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHH-HHHHHHH
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHH-HHHHHhh
Confidence 356677778999999999999999999999999999999999999999998887 999999 788999999 7777654
No 109
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=98.92 E-value=3.6e-09 Score=103.81 Aligned_cols=78 Identities=22% Similarity=0.263 Sum_probs=57.8
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCC
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIY 704 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~G-advN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~ 704 (706)
.+++.|++.|++++.++..|.||||+|+..|+.+++++|+..| ++++.+|..|+||||+|+..|+.+++ ++|++.++.
T Consensus 58 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~-~~Ll~~g~~ 136 (237)
T 3b7b_A 58 EAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLV-KLLLSKGSD 136 (237)
T ss_dssp HHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHH-HHHHHTTCC
T ss_pred HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHH-HHHHHCCCC
Confidence 3456667777777777777777777777777777777777777 77777777777777777777777777 666665543
No 110
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.91 E-value=2.6e-09 Score=103.86 Aligned_cols=76 Identities=14% Similarity=0.091 Sum_probs=68.8
Q ss_pred HHHHHHhCCCCCCccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCC
Q 005246 627 LVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLI 703 (706)
Q Consensus 627 Lv~kLle~GadiN~~D~-~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~ 703 (706)
+++.|++.|++++..+. .|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.++| ++|++.+.
T Consensus 158 ~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v-~~L~~~~~ 234 (240)
T 3eu9_A 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMI-NHLQEARQ 234 (240)
T ss_dssp THHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHH-HHHHHHC-
T ss_pred HHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHH-HHHHHhhh
Confidence 45566778999999887 899999999999999999999999999999999999999999999999999 88877654
No 111
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=98.89 E-value=5.9e-09 Score=105.92 Aligned_cols=71 Identities=27% Similarity=0.373 Sum_probs=61.4
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHHHcCCCC
Q 005246 634 GGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLIKFLIYI 705 (706)
Q Consensus 634 ~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLle~~~~i 705 (706)
........+..|.||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.++| ++|++.++.+
T Consensus 188 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v-~~Ll~~gad~ 258 (299)
T 1s70_B 188 GHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEAC-RILVENLCDM 258 (299)
T ss_dssp TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHH-HHHHHTTCCT
T ss_pred cCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHH-HHHHHcCCCC
Confidence 3444445678899999999999999999999999999999999999999999999999998 8888877643
No 112
>3mlp_A Transcription factor COE1; transcription factor, pseudo-IG-fold, TIG-domain, IPT-domain loop-helix; HET: DNA CIT; 2.80A {Mus musculus} PDB: 3n50_A
Probab=98.87 E-value=5.3e-09 Score=109.92 Aligned_cols=90 Identities=24% Similarity=0.350 Sum_probs=77.3
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCC-CCCceeeEEEEeCCCc
Q 005246 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAAGRVPFYITGSNRL 516 (706)
Q Consensus 438 lfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-h~pG~Vpl~Vt~~n~~ 516 (706)
.+.|+.++|+.|+.+||+.|+|.|..|.+ ++.|+||...|-.++|....|||++|| |.||.|.|.+...+..
T Consensus 231 tP~IkaIsPnEG~~tGG~tV~IiGenFf~-------GLQVvFGtt~vWselITphAIRV~tPPr~~PGvVdVTLs~ksKq 303 (402)
T 3mlp_A 231 TPCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVIFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ 303 (402)
T ss_dssp CCEEEECSSCEECTTCCCEEEEEEECCCT-------TCEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEE
T ss_pred CcceEEecCCCCCccCCeEEEEeCCCccc-------CCEEEEccEeeeeEEecccceEEECCCCCCCCceEEEEEecCcc
Confidence 35899999999999999999999998865 899999999999999999999999999 9999999999998887
Q ss_pred ccC-ceeeeeeecCCCCCC
Q 005246 517 ACS-EVREFEYREKPSKAG 534 (706)
Q Consensus 517 ~cS-EvreFEYr~~~~~~~ 534 (706)
-|- ....|.|-.-..+.+
T Consensus 304 f~kg~pgrF~YtALnePtI 322 (402)
T 3mlp_A 304 FCKGTPGRFIYTALNEPTI 322 (402)
T ss_dssp ESTTSCEEEEEC---CCTT
T ss_pred cccCCCCceeeecCCCCcc
Confidence 774 346799886544443
No 113
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.87 E-value=4.9e-09 Score=111.87 Aligned_cols=68 Identities=19% Similarity=0.236 Sum_probs=38.4
Q ss_pred HHhCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005246 631 IHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLGCYLEVLI 699 (706)
Q Consensus 631 Lle~GadiN~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~eiVa~LLl 699 (706)
+++.|+++|.+|..|.||||+|+..|+.++|++|+..|++++.+|..|+||||+|+..|+.++| ++|+
T Consensus 152 ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v-~~Ll 219 (373)
T 2fo1_E 152 CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMM-VYML 219 (373)
T ss_dssp HHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHH-HHHT
T ss_pred HHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHH-HHHH
Confidence 3445555555555555555555555555555555555555555555555555555555555555 4443
No 114
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.83 E-value=1.4e-08 Score=98.81 Aligned_cols=89 Identities=21% Similarity=0.165 Sum_probs=69.3
Q ss_pred HHHHHHHhHHHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCCHH
Q 005246 614 LIQNLLRNRLCEWLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRLG 692 (706)
Q Consensus 614 LLe~llk~kl~e~Lv~kLle~GadiN~~D-~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~rD~~G~TPLH~Aa~~Gh~e 692 (706)
.|+.++...- ..+++.|++.|++++..+ ..|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+
T Consensus 45 ~L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 123 (240)
T 3eu9_A 45 LLHWAAINNR-IDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTS 123 (240)
T ss_dssp HHHHHHHTTC-HHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHhCC-HHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHH
Confidence 3444443322 245667778888887554 45899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCC
Q 005246 693 CYLEVLIKFLIY 704 (706)
Q Consensus 693 iVa~LLle~~~~ 704 (706)
++ ++|++.++.
T Consensus 124 ~~-~~Ll~~~~~ 134 (240)
T 3eu9_A 124 IV-AYLIAKGQD 134 (240)
T ss_dssp HH-HHHHHTTCC
T ss_pred HH-HHHHhcCCC
Confidence 98 777776553
No 115
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=98.70 E-value=1.1e-08 Score=107.34 Aligned_cols=75 Identities=16% Similarity=0.079 Sum_probs=66.7
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC---HHHHHHHHHcC-CCCcccCCCCCcHHHHHHH----cCCHHHHHHH
Q 005246 626 WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY---EWAMRPIIATG-VSPNFRDARGRTALHWASY----FGRLGCYLEV 697 (706)
Q Consensus 626 ~Lv~kLle~GadiN~~D~~G~TpLHlAA~lG~---~~~V~~LL~~G-advN~rD~~G~TPLH~Aa~----~Gh~eiVa~L 697 (706)
.+++.|++.|++++.+|..|+||||+|+..|+ ..++..|+..+ ++++.+|..|+||||+|+. .|+.++| ++
T Consensus 145 ~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v-~~ 223 (327)
T 1sw6_A 145 ELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAA-KY 223 (327)
T ss_dssp HHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHH-HH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHH-HH
Confidence 45777888999999999999999999999998 67788888876 7899999999999999999 9999999 66
Q ss_pred HHHc
Q 005246 698 LIKF 701 (706)
Q Consensus 698 Lle~ 701 (706)
|++.
T Consensus 224 Ll~~ 227 (327)
T 1sw6_A 224 YLDI 227 (327)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 116
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.40 E-value=2.5e-08 Score=108.13 Aligned_cols=74 Identities=15% Similarity=0.150 Sum_probs=56.9
Q ss_pred HHHHHHHhCCCCC---CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcc--cCCCCCcHHHHHH-HcCCHHHHHHHHH
Q 005246 626 WLVWKIHEGGKGP---NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF--RDARGRTALHWAS-YFGRLGCYLEVLI 699 (706)
Q Consensus 626 ~Lv~kLle~Gadi---N~~D~~G~TpLHlAA~lG~~~~V~~LL~~GadvN~--rD~~G~TPLH~Aa-~~Gh~eiVa~LLl 699 (706)
-+++.|++.|+++ +..+.. .||||+||..|+.++|++|+..|++++. +|..|+||||+|| ..||.+|| ++|+
T Consensus 142 eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv-~~Ll 219 (376)
T 2aja_A 142 HVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVI-NFLL 219 (376)
T ss_dssp HHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHH-HHHT
T ss_pred HHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHH-HHHH
Confidence 4566777788652 222223 8899999999999999988888888887 8888889999998 88998888 6666
Q ss_pred Hc
Q 005246 700 KF 701 (706)
Q Consensus 700 e~ 701 (706)
+.
T Consensus 220 ~~ 221 (376)
T 2aja_A 220 DC 221 (376)
T ss_dssp TS
T ss_pred hC
Confidence 53
No 117
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.26 E-value=1.9e-07 Score=101.16 Aligned_cols=77 Identities=14% Similarity=0.035 Sum_probs=58.7
Q ss_pred HHHHHHHhCCCCC---CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCcHHHHHHHcCCHHHHHHHHH
Q 005246 626 WLVWKIHEGGKGP---NVIDDGGQGVVHLAAALGYEWAMRPIIATGVS---PNFRDARGRTALHWASYFGRLGCYLEVLI 699 (706)
Q Consensus 626 ~Lv~kLle~Gadi---N~~D~~G~TpLHlAA~lG~~~~V~~LL~~Gad---vN~rD~~G~TPLH~Aa~~Gh~eiVa~LLl 699 (706)
.+++.|++.|+.. +..+..|.||||+||..|+.++|++|+..|++ ++..+.+ +||||+||..||.++| ++|+
T Consensus 106 e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv-~~Ll 183 (376)
T 2aja_A 106 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVL-NRLC 183 (376)
T ss_dssp HHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHH-HHHH
T ss_pred HHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHH-HHHH
Confidence 3567777777732 23456788999999999999999999999976 2333333 9999999999999999 8888
Q ss_pred HcCCC
Q 005246 700 KFLIY 704 (706)
Q Consensus 700 e~~~~ 704 (706)
+.++.
T Consensus 184 ~~ga~ 188 (376)
T 2aja_A 184 ELAPT 188 (376)
T ss_dssp HSCGG
T ss_pred HcCCc
Confidence 87654
No 118
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=98.21 E-value=4.1e-06 Score=74.63 Aligned_cols=84 Identities=24% Similarity=0.220 Sum_probs=61.1
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCc-eEEeeCCeee-e-eEEeecCeeeeccCCCC--CceeeEEEEe
Q 005246 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTK-WGCMFGEIEV-P-AEVLTDNVIRCQAPSHA--AGRVPFYITG 512 (706)
Q Consensus 438 lfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~-~~cmFGd~eV-p-ae~~~~GvLrC~~Pph~--pG~Vpl~Vt~ 512 (706)
.+.|++|+|..|+. ||+|+|.|++|... ... ..|.+|+++. + ++..+...|+|.++|+. .|.|.|+|..
T Consensus 7 ~P~It~i~P~~Gp~--GT~vTI~G~nlg~~----~sdv~~V~vgg~~C~~~~~~~s~~~IvC~~~~~~~~~g~V~V~v~~ 80 (99)
T 1uad_C 7 PPLVTGISPNEGIP--WTKVTIRGENLGTG----PTDLIGLTICGHNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKS 80 (99)
T ss_dssp CCEEEEEESSEEST--TCEEEEEEECSCSS----GGGEEEEEETTEECGGGCEEEETTEEEEECCCCSSSSCCEEEEETT
T ss_pred CCEEEEEECCCcCC--CCEEEEEEEeCCCC----cccceEEEECCEEceEeeceeecCEEEEEeCCCCCcceeEEEEECC
Confidence 46899999999988 69999999999652 112 4799999844 3 36788999999998865 4555555532
Q ss_pred CCCcccCceeeeeeecC
Q 005246 513 SNRLACSEVREFEYREK 529 (706)
Q Consensus 513 ~n~~~cSEvreFEYr~~ 529 (706)
+..+-|.. .|+|.++
T Consensus 81 -~~~~~s~~-~F~y~~P 95 (99)
T 1uad_C 81 -GGRGTSTV-SFKLLKP 95 (99)
T ss_dssp -TEECEESS-CCEECCC
T ss_pred -CCcEEecc-eEEEeCc
Confidence 22333443 7999865
No 119
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.02 E-value=1.1e-05 Score=88.53 Aligned_cols=86 Identities=21% Similarity=0.317 Sum_probs=71.5
Q ss_pred CceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCCCC-ceeeEEEEeCCC
Q 005246 437 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA-GRVPFYITGSNR 515 (706)
Q Consensus 437 qlfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph~p-G~Vpl~Vt~~n~ 515 (706)
|...|++|+|..|. .||+|+|.|++|... .....|+||+.+.....+.+..|.|.+|.+.+ |.++|.|...+.
T Consensus 16 ~p~~i~~~~P~~g~--~~~~~~i~G~nfg~~----~~~~~v~~~~~~~~v~~~~~~~i~~~vp~~~~~g~~~v~~~~~~~ 89 (430)
T 3tc9_A 16 KPVVISEFSPKEGG--LGTRMLLYGENFGSD----ISKIKVTIGGQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILNDEG 89 (430)
T ss_dssp SCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEEECTTS
T ss_pred CCCEEEEEcCCCCC--CCCEEEEEEEcCCCC----ccceEEEECCEEEEEEEECCCEEEEEeCCCCCCccEEEEEecCCc
Confidence 45589999999999 799999999999752 35789999999888888999999999999998 999999988774
Q ss_pred c----ccCceeeeeeecC
Q 005246 516 L----ACSEVREFEYREK 529 (706)
Q Consensus 516 ~----~cSEvreFEYr~~ 529 (706)
. +.+ ...|+|...
T Consensus 90 ~~~~~~~~-~~~F~y~~~ 106 (430)
T 3tc9_A 90 EEIANTEA-NEKFVYQKK 106 (430)
T ss_dssp CEEEEEEC-SSCCEECCC
T ss_pred ceeeEEEE-eeEEEEEEE
Confidence 2 222 356888754
No 120
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.85 E-value=3.3e-05 Score=83.87 Aligned_cols=87 Identities=20% Similarity=0.315 Sum_probs=71.2
Q ss_pred cCceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCC----eeeeeEEeecCeeeeccCCCCCceeeEEEE
Q 005246 436 EQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE----IEVPAEVLTDNVIRCQAPSHAAGRVPFYIT 511 (706)
Q Consensus 436 ~qlfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd----~eVpae~~~~GvLrC~~Pph~pG~Vpl~Vt 511 (706)
.|...|++|+|..|. .||||+|.|++|... .+...|+||+ .+....-+....|.|++|.+.+|.+++.|.
T Consensus 15 ~~~~~~~~~~p~~g~--~~~~~~i~g~nfg~~----~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~vp~~~~g~~~i~v~ 88 (409)
T 3hrp_A 15 NQPVTVESFMPVEGK--LREKVIVKGSNFGTD----KSKVKVYFVDEAAERLSTVIGIDNNTLYCLAPRQLPGGNRIKVI 88 (409)
T ss_dssp TSCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEEECSSCEEEEEEEEEETTEEEEECCSCCSEEEEEEEE
T ss_pred CCCcEEEEEcCCCCC--CCcEEEEEeEcCCCC----ccceEEEECCcccceEEEEEEECCCEEEEEECCCCCCcEEEEEE
Confidence 345589999999988 799999999999762 3678999999 777777799999999999999999999999
Q ss_pred eCCCcccCceeeeeeecC
Q 005246 512 GSNRLACSEVREFEYREK 529 (706)
Q Consensus 512 ~~n~~~cSEvreFEYr~~ 529 (706)
-.+..+.++ ..|.|...
T Consensus 89 ~~~~~~~~~-~~F~y~~~ 105 (409)
T 3hrp_A 89 VDGKEVTTD-GTFKYEQA 105 (409)
T ss_dssp ETTEEEECS-SCEEECCC
T ss_pred ECCeeEEEe-eeEEEecc
Confidence 877644332 45777654
No 121
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.81 E-value=2.7e-05 Score=87.60 Aligned_cols=87 Identities=23% Similarity=0.347 Sum_probs=70.3
Q ss_pred cCceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCCCC-ceeeEEEEeCC
Q 005246 436 EQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA-GRVPFYITGSN 514 (706)
Q Consensus 436 ~qlfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph~p-G~Vpl~Vt~~n 514 (706)
.|...|++|+|..|.. ||+|+|.|+.|... .+...|+||++++...-+.+..|.|.+|.|.. |.++|.|..+.
T Consensus 15 ~~p~~i~~~~P~~G~~--~t~~~I~G~nFg~d----~~~i~V~~~~~~a~v~~~~~~~i~~~vp~~~~~G~~~v~v~~~~ 88 (496)
T 3kya_A 15 SKPVAISDFTPKEGGA--YQKLLIYGENFGTD----VSKVKVKIGGKDAIVINVKSTYVYCFVPSGAFSGEIEITVGEGE 88 (496)
T ss_dssp TSCCEEEEEECSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEESCGG
T ss_pred CCCcEEEEEcCCCCCC--CCEEEEEeecCCCC----cceeEEEECCEEEEEEEECCCEEEEEECCCCCCCcEEEEEEecC
Confidence 3455899999999998 79999999999763 36899999998877767889999999999888 99999997665
Q ss_pred C--cccCceeeeeeecC
Q 005246 515 R--LACSEVREFEYREK 529 (706)
Q Consensus 515 ~--~~cSEvreFEYr~~ 529 (706)
. .+.++ ..|+|...
T Consensus 89 ~~~~~~~~-~~F~Y~~~ 104 (496)
T 3kya_A 89 NAVTTTAS-TTFSYEKK 104 (496)
T ss_dssp GCEEEECS-SCCEECCC
T ss_pred CceEEEec-ceEEEEEE
Confidence 3 22232 67888643
No 122
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.59 E-value=6.1e-05 Score=88.44 Aligned_cols=92 Identities=20% Similarity=0.193 Sum_probs=60.9
Q ss_pred CceEEEeecCCCccCCCceEEEEEccCCCCCCC--CCCCceEEeeCCeeeee--EEeecCeeeeccCCCCCceeeEEEEe
Q 005246 437 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKL--SSDTKWGCMFGEIEVPA--EVLTDNVIRCQAPSHAAGRVPFYITG 512 (706)
Q Consensus 437 qlfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~--~~~~~~~cmFGd~eVpa--e~~~~GvLrC~~Pph~pG~Vpl~Vt~ 512 (706)
..+.|+.|+|..|+..|||.|+|.|.+|..... .......|.||+++... +.+.+..|.|.+||..+|.+++.|+-
T Consensus 540 ~~P~ItsI~P~~Gp~~GGT~vTI~G~nf~~~~~~~~~~~~~~V~igg~~C~~~~~~~s~t~I~C~tp~~~~~~~~v~V~v 619 (727)
T 2uzx_B 540 CLPAIYKVFPNSAPLEGGTRLTICGWDFGFRRNNKFDLKKTRVLLGNESCTLTLSESTMNTLKCTVGPAMNKHFNMSIII 619 (727)
T ss_dssp CCCEEEEEESSBCCSSCCCEEEEEEECCCEEETTEEESTTCEEEETTEECEECGGGCCSSEEEEECCC-----CCCEEEE
T ss_pred eCCEEeccCCCcccCCCCEEEEEEEecCCCCcccccCCcccEEEECCCccceeeeeccCCEEEEEeCCCCCCCccEEEEE
Confidence 357999999999999999999999999864200 00235789999984433 24677889999999765544444443
Q ss_pred CCCcccCceeeeeeec
Q 005246 513 SNRLACSEVREFEYRE 528 (706)
Q Consensus 513 ~n~~~cSEvreFEYr~ 528 (706)
.+....+....|+|.+
T Consensus 620 ~~~~~~~~~~~FtY~~ 635 (727)
T 2uzx_B 620 SNGHGTTQYSTFSYVD 635 (727)
T ss_dssp ECSSCEEEEECCBCCC
T ss_pred eCCcceeccccccccc
Confidence 3333223456799974
No 123
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.55 E-value=0.00018 Score=78.91 Aligned_cols=88 Identities=19% Similarity=0.325 Sum_probs=69.1
Q ss_pred cCceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCCCC-ceeeEEEEeCC
Q 005246 436 EQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA-GRVPFYITGSN 514 (706)
Q Consensus 436 ~qlfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph~p-G~Vpl~Vt~~n 514 (706)
.|...|++|+|.+|.. ||||+|.|.+|... .....|+||+.++...-+++..|.|.+|+... |.|.|.|..++
T Consensus 17 ~~p~~i~~~~P~~g~~--~~~~~i~G~nfg~~----~~~~~v~~~~~~a~v~~~~~~~i~~~vp~~~~~g~~~v~v~~~~ 90 (433)
T 4hw6_A 17 KEEIVVEKFLPTEGRK--GTRVVVYGRNFGND----VSKVKVTIGGYPAKVINVKGESLLCICPSKAYEGDVKVSVVGDD 90 (433)
T ss_dssp TSCCEEEEEESSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEEEEEEECSSEEEEECCTTCTTCCEEEEEECTT
T ss_pred CCCCEEEEECCCCCCC--CCEEEEEeECCCCC----cceeEEEECCEEEEEEEeCCCEEEEEeCCCCCCCCEEEEEecCC
Confidence 3455899999999987 99999999999762 45899999999888777899999999999665 99999988776
Q ss_pred Cc---ccCceeeeeeecC
Q 005246 515 RL---ACSEVREFEYREK 529 (706)
Q Consensus 515 ~~---~cSEvreFEYr~~ 529 (706)
.. .-.--..|+|...
T Consensus 91 ~~~~~~~~~~~~F~y~~~ 108 (433)
T 4hw6_A 91 EAELKSGVCEAKFDYQYN 108 (433)
T ss_dssp SCEEEEEECSSCCEECCC
T ss_pred cceeeEEEeeeEEEEEee
Confidence 42 0111255777643
No 124
>2yrp_A Nuclear factor of activated T-cells, cytoplasmic 4; beta-sandwich, immunoglobulin-like fold, TIG domain, IPT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.34 E-value=0.0008 Score=61.30 Aligned_cols=87 Identities=16% Similarity=0.203 Sum_probs=64.2
Q ss_pred ccCceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe--------eee----eEEeecCeeeeccCC-C
Q 005246 435 QEQLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--------EVP----AEVLTDNVIRCQAPS-H 501 (706)
Q Consensus 435 q~qlfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~--------eVp----ae~~~~GvLrC~~Pp-h 501 (706)
...++.|.+.|-.-+++.||-||+|+|..|.. .-.|+|=+. |.- .++.....|+|.+|| |
T Consensus 5 a~~~P~I~k~s~~s~~v~GG~Ev~Ll~~k~~k-------d~kV~F~E~~~dG~~~WE~~a~f~~d~~~q~aivf~tPpY~ 77 (114)
T 2yrp_A 5 SSGLPQVEAYSPSACSVRGGEELVLTGSNFLP-------DSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYS 77 (114)
T ss_dssp CCSCCEEEEEESSCEETTCCSEEEEEEESCCT-------TCEEEEECBCTTSCBCCCCBCCBCTTTCBTTEEEEECCCCS
T ss_pred CCCCCEEEEecCcccccCCCCEEEEEecccCC-------CCEEEEEEECCCCCcceEEeeEEChHHcccccEEEecCCCC
Confidence 34578999999999999999999999997632 134555221 222 345677889999999 4
Q ss_pred -----CCceeeEEEEeCCCcccCceeeeeeecC
Q 005246 502 -----AAGRVPFYITGSNRLACSEVREFEYREK 529 (706)
Q Consensus 502 -----~pG~Vpl~Vt~~n~~~cSEvreFEYr~~ 529 (706)
.|=.|.||+ +.+...+||...|+|...
T Consensus 78 ~~~I~~pV~V~~~l-~~~~rk~Se~~~FtY~P~ 109 (114)
T 2yrp_A 78 NKRVSRPVQVYFYV-SNGRRKRSPTQSFRFLPV 109 (114)
T ss_dssp CCSCSSCEEEEEEE-ECSSSCBCCCEEEEEECC
T ss_pred CCccCCCeEEEEEE-CCCCCcccCCcCcEEech
Confidence 455677788 455456899999999863
No 125
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.34 E-value=3e-05 Score=91.00 Aligned_cols=74 Identities=12% Similarity=0.212 Sum_probs=1.2
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCC-CCceeeEEEEeCCCc
Q 005246 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRL 516 (706)
Q Consensus 438 lfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph-~pG~Vpl~Vt~~n~~ 516 (706)
.++|+.|+|.+|+..|||.|+|+|.+|... ....|.||+.+.....+++..|+|.+|++ .+|.|+|.|+.++..
T Consensus 635 ~P~I~sisP~~G~~sGGt~ITI~G~nf~~~-----~~~~V~ig~~~C~i~~~s~t~I~C~tP~~~~~g~~~V~V~idg~~ 709 (727)
T 2uzx_B 635 DPVITSISPKYGPMAGGTLLTLTGNYLNSG-----NSRHISIGGKTCTLKSVSNSILECYTPAQTISTEFAVKLKIDLAN 709 (727)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cceeEEECCCccccCCCEEEEEEEECCCCC-----CceEEEECCEEeeEEeecCCEEEEEcCCCCCCceEEEEEEECCEE
Confidence 568999999999999999999999999652 35789999987766779999999999994 589999999987755
No 126
>1ikn_C P50D, protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1
Probab=95.97 E-value=0.016 Score=53.17 Aligned_cols=85 Identities=16% Similarity=0.177 Sum_probs=60.3
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCC------e-ee-----eeEEeecCeeeeccCC-CC----
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE------I-EV-----PAEVLTDNVIRCQAPS-HA---- 502 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd------~-eV-----pae~~~~GvLrC~~Pp-h~---- 502 (706)
.|.+.|=.-|++.||.||.++|..+.- -...|.|=+ + |. ++.+.....|+|.+|| |.
T Consensus 5 ~I~r~s~~s~~v~GG~Ev~Llc~kv~K------~dikV~F~e~~~~g~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I~ 78 (119)
T 1ikn_C 5 KIVRMDRTAGCVTGGEEIYLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNIT 78 (119)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCT------TSEEEEEEEECTTSCEEEEECCCCGGGEETTTEEEEECCCCSCTTCS
T ss_pred EEEEeeCCccccCCCCEEEEEeccccC------CCCEEEEEEeCCCCCceEEeEEeChhhccccceEEEECCCCCCCCcC
Confidence 699999999999999999999996631 124444432 1 22 3445567889999999 43
Q ss_pred -CceeeEEEEeCCCcccCceeeeeeecCC
Q 005246 503 -AGRVPFYITGSNRLACSEVREFEYREKP 530 (706)
Q Consensus 503 -pG~Vpl~Vt~~n~~~cSEvreFEYr~~~ 530 (706)
|=.|.|++.......+|+...|+|....
T Consensus 79 ~pV~V~i~L~r~sd~~~Sep~~FtY~P~~ 107 (119)
T 1ikn_C 79 KPASVFVQLRRKSDLETSEPKPFLYYPEI 107 (119)
T ss_dssp SCEEEEEEEEETTTCCBCCCEEEEEECCS
T ss_pred CCEEEEEEEEcCCCCCccCCcccEeecCc
Confidence 3345556655444568999999998743
No 127
>1u36_A DNA-binding, nuclear factor NF-kappa-B P105 subunit; transcription factor, NF-KB, dimerization domain, intertwined folding; 1.89A {Mus musculus} SCOP: b.1.18.1 PDB: 1u3z_A 1u3y_A 3jv4_B 1bfs_A 1u3j_A 1u42_A 1u41_A 1nfi_B
Probab=95.45 E-value=0.031 Score=50.32 Aligned_cols=83 Identities=16% Similarity=0.114 Sum_probs=58.2
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe-------eee-----eEEeecCeeeeccCC-CC----
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-------EVP-----AEVLTDNVIRCQAPS-HA---- 502 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-------eVp-----ae~~~~GvLrC~~Pp-h~---- 502 (706)
.|.+.|=.-|++.||.||.++|..+.- -.-.|.|=+. |.- +.+.....|+|.+|| |.
T Consensus 5 ~I~r~s~~s~~v~GG~Ev~Llc~kv~K------~dikV~F~E~~~~g~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I~ 78 (106)
T 1u36_A 5 KIVRMDRTAGCVTGGEEIWLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAICFKTPKYKDVNIT 78 (106)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCT------TSCEEEEEECC----CEEEECBCCGGGEETTTEEEEECCCCSCTTCS
T ss_pred EEEEeeCCccccCCCCEEEEEeccccC------CCCEEEEEEeCCCCCceEEeeecCHHHcccceEEEEECCCCCCCccC
Confidence 699999999999999999999996531 1234544321 332 344566889999999 43
Q ss_pred -CceeeEEEEeCCCcccCceeeeeeec
Q 005246 503 -AGRVPFYITGSNRLACSEVREFEYRE 528 (706)
Q Consensus 503 -pG~Vpl~Vt~~n~~~cSEvreFEYr~ 528 (706)
|=.|.|++.......+|+...|+|..
T Consensus 79 ~pV~V~~~l~r~sd~~~Sep~~FtY~P 105 (106)
T 1u36_A 79 KPASVFVQLRRKSDLETSEPKPFLYYP 105 (106)
T ss_dssp SCEEEEEEEECTTTCCBCCCEEEEEEC
T ss_pred CCEEEEEEEEcCCCCCccCCcCcEEcC
Confidence 33455555554455689999999963
No 128
>1my7_A NF-kappab P65 (RELA) subunit; immunoglobulin, IG, beta-sandwich, beta-sheet, homodimerdna- binding, transcription regulation, activator; 1.49A {Mus musculus} SCOP: b.1.18.1 PDB: 1my5_A 1bft_A
Probab=94.95 E-value=0.043 Score=49.98 Aligned_cols=88 Identities=16% Similarity=0.221 Sum_probs=59.7
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCC-C--CCCceEEeeCCeeeeeEEeecCeeeeccCC-CC-----CceeeEEE
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKL-S--SDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AGRVPFYI 510 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~-~--~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-h~-----pG~Vpl~V 510 (706)
.|.+.|=.-|++.||.||.++|..+.-... + ..-.|. +||++. |+++.....|+|.+|| |. |=.|.+++
T Consensus 5 ~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~VrF~e~~WE-~~g~f~-~~Dvh~Q~aIvfktPpY~~~~I~~pV~V~i~L 82 (114)
T 1my7_A 5 KICRVNRRSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWE-ARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQL 82 (114)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEETTEE-EECBCC-GGGBCTTSEEEEECCCCSCTTCCSCEEEEEEE
T ss_pred EEEEecCCceecCCCcEEEEEecccccCCCEEEEEccCeE-EecccC-hhhcccceeEEEECCCCCCCccCCCEEEEEEE
Confidence 699999999999999999999996532000 0 001232 333332 2566777889999999 43 33455566
Q ss_pred EeCCCcccCceeeeeeecC
Q 005246 511 TGSNRLACSEVREFEYREK 529 (706)
Q Consensus 511 t~~n~~~cSEvreFEYr~~ 529 (706)
.-.....+||...|+|...
T Consensus 83 ~r~sd~~~Sep~~FtY~P~ 101 (114)
T 1my7_A 83 RRPSDRELSEPMEFQYLPD 101 (114)
T ss_dssp EETTTTEECCCEEEEEECC
T ss_pred EeCCCCCcCCCcccEEecC
Confidence 5544556799999999874
No 129
>1zk9_A Transcription factor RELB; NF-KB, transcription factors, intertwined dimer; 2.18A {Mus musculus} PDB: 1zka_A 3jv6_A 3jv4_A 3jss_A 3juz_A 3jv0_A
Probab=94.21 E-value=0.024 Score=51.32 Aligned_cols=88 Identities=15% Similarity=0.202 Sum_probs=58.6
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCC-CCCC--CCCceEEeeCCeeeeeEEeecCeeeeccCC-CCC---ceee--EE
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGT-KKLS--SDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HAA---GRVP--FY 509 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~-~~~~--~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-h~p---G~Vp--l~ 509 (706)
..|.+.|=.-|++.||.||.++|..+.- .-.+ ..-.|.. ||++ .++++.....|+|.+|| |.+ -.|. ++
T Consensus 13 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~V~F~e~~WE~-~~~f-~~~Dvh~Q~aIvf~tPpY~~~~I~~pV~V~i~ 90 (110)
T 1zk9_A 13 LRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSTASWEG-RADF-SQADVHRQIAIVFKTPPYEDLEISEPVTVNVF 90 (110)
T ss_dssp SCEEEESCSCCCTTCCCCCCEEESCCCTTSCCCEEEETTEEE-ECCC-CGGGCCCCCCCCCCCCCCSCTTCSSCEEEEEC
T ss_pred CEEEEecCCccccCCCCEEEEEecccccCCcEEEEechheee-cccc-CcccccccceEEEECCCCCCcccCCCeEEEEE
Confidence 3799999999999999999999995532 1000 0003432 4443 13566777889999999 443 3344 44
Q ss_pred EEeCCCcccCceeeeeeec
Q 005246 510 ITGSNRLACSEVREFEYRE 528 (706)
Q Consensus 510 Vt~~n~~~cSEvreFEYr~ 528 (706)
+.......+||...|+|..
T Consensus 91 L~r~sd~~~Sep~~FtY~P 109 (110)
T 1zk9_A 91 LQRLTDGVCSEPLPFTYLP 109 (110)
T ss_dssp CBCTTTCCBCCCEEEEECC
T ss_pred EEeCCCCCccCCcCcEEcC
Confidence 4433455689999999963
No 130
>1oy3_C Transcription factor P65; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: b.1.18.1 PDB: 1k3z_A
Probab=94.06 E-value=0.091 Score=49.13 Aligned_cols=88 Identities=16% Similarity=0.231 Sum_probs=60.1
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCC-C--CCCceEEeeCCeeeeeEEeecCeeeeccCC-CC-----CceeeEEE
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKL-S--SDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-HA-----AGRVPFYI 510 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~-~--~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-h~-----pG~Vpl~V 510 (706)
.|.++|=.-|++.||.||.++|..+.-... + ..-.|. .||++. |+++.....|+|.+|| |. |=.|-+++
T Consensus 5 ~I~r~s~~sg~v~GG~Ev~LLceKv~K~Di~VrF~e~~WE-~~g~f~-~~dVh~Q~AIvfkTPpY~~~~I~~pV~V~iqL 82 (136)
T 1oy3_C 5 KICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWE-ARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQL 82 (136)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEETTEE-EECBCC-GGGBCTTSEEEEECCCCSCTTCCSCEEEEEEE
T ss_pred EEEEecCCccccCCCcEEEEEccccccCCCEEEEEccCeE-EecccC-hhheecceEEEEECCCCCCccCCCCeEEEEEE
Confidence 699999999999999999999996531000 0 001232 233331 2566777789999999 54 44566666
Q ss_pred EeCCCcccCceeeeeeecC
Q 005246 511 TGSNRLACSEVREFEYREK 529 (706)
Q Consensus 511 t~~n~~~cSEvreFEYr~~ 529 (706)
.-.....+||...|+|...
T Consensus 83 ~rpsd~~~Sep~~F~Y~P~ 101 (136)
T 1oy3_C 83 RRPSDRELSEPMEFQYLPD 101 (136)
T ss_dssp EETTTTEECCCEEEEEECC
T ss_pred EeCCCCCccCCcceEEecC
Confidence 6545557899999999864
No 131
>3iag_C Recombining binding protein suppressor of hairless; protein-DNA complex, signaling, transcription, notch, activator, alternative splicing; HET: XYL; 2.00A {Mus musculus} PDB: 3brg_C* 3nbn_A 2f8x_C 3v79_C*
Probab=93.34 E-value=0.17 Score=54.87 Aligned_cols=68 Identities=16% Similarity=0.317 Sum_probs=57.1
Q ss_pred eEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCC-----------CCCceeeEEEEeCCCcccCceee
Q 005246 455 TKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-----------HAAGRVPFYITGSNRLACSEVRE 523 (706)
Q Consensus 455 tKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-----------h~pG~Vpl~Vt~~n~~~cSEvre 523 (706)
.-|-|.|.+|.. ++.|.|||+++.|.+-.+-.|.|..|+ ..|..||+.+.-.++..-+--..
T Consensus 343 amlEl~G~nF~~-------~L~VWFG~v~aeT~yR~~e~l~c~vP~~~~~~~~w~~~~~~~~Vpi~LVR~DGviy~t~~t 415 (422)
T 3iag_C 343 AMLELTGQNFTP-------NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLT 415 (422)
T ss_dssp CEEEEEEESCCT-------TEEEEETTEECCEEEEETTEEEEECCCGGGTSTTCSSCCSCEEEEEEEEETTSEEEEEEEE
T ss_pred eEEEEEccCCCC-------CceEEECCCCceeEEeccceEEEeCCCHHHhccCccccCCceEEEEEEEecCCEEeeCCcc
Confidence 668899998854 899999999999999999999999998 13567999888888886666678
Q ss_pred eeeecC
Q 005246 524 FEYREK 529 (706)
Q Consensus 524 FEYr~~ 529 (706)
|+|...
T Consensus 416 fty~pe 421 (422)
T 3iag_C 416 FTYTPE 421 (422)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 888653
No 132
>2v2t_A RELB, transcription factor RELB; 4-diphosphocytidyl-2C-methyl-D-erythritol, aquifex aeolicus, nucleotide-binding, isoprene biosynthesis; 3.05A {Mus musculus} PDB: 3do7_A
Probab=92.09 E-value=0.23 Score=51.94 Aligned_cols=84 Identities=15% Similarity=0.195 Sum_probs=61.5
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe--eee-----eEEeecCeeeeccCC-CC-----Cce
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--EVP-----AEVLTDNVIRCQAPS-HA-----AGR 505 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~--eVp-----ae~~~~GvLrC~~Pp-h~-----pG~ 505 (706)
..|.++|=.-|++.||.||.++|..+.- -...|.|=+. |.- +.+.....|+|.+|| +. |=.
T Consensus 191 L~I~r~s~~sgsv~GG~Ev~LLc~kv~K------~dikV~F~e~~WE~~~~f~~~Dvh~Q~aIvf~tPpY~~~~I~~pV~ 264 (288)
T 2v2t_A 191 LRICRINKESGPCTGGEELYLLCDKVQK------EDISVVFSTASWEGRADFSQADVHRQIAIVFKTPPYEDLEISEPVT 264 (288)
T ss_dssp CCBCCCSCSCCCSSCCCEEEEEBSSCCT------TSEEEEEECSSCEEECCCCGGGEETTTEEEEECCCCTTCCCSSCCB
T ss_pred CeEEEeeCCccccCCCCEEEEEeccccc------CCCEEEEEecceEEeeEeChhhccceeEEEEECCCCCCCCcCCCeE
Confidence 4799999999999999999999996631 1355555443 333 344566679999999 43 456
Q ss_pred eeEEEEeCCCcccCceeeeeeec
Q 005246 506 VPFYITGSNRLACSEVREFEYRE 528 (706)
Q Consensus 506 Vpl~Vt~~n~~~cSEvreFEYr~ 528 (706)
|-|++.-.....|||...|+|..
T Consensus 265 V~iqL~r~sd~~~Sep~~FtY~P 287 (288)
T 2v2t_A 265 VNVFLQRLTDGVCSEPLPFTYLP 287 (288)
T ss_dssp CCEEEEETTTCCBCCCBCCBCCC
T ss_pred EEEEEEeCCCCCcCCCcCcEEcC
Confidence 66777765555789999999963
No 133
>1nfk_A Protein (nuclear factor kappa-B (NF-KB)); NF-KB P50, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 2v2t_B 1ooa_A 1lei_B* 1le9_B 1le5_B* 2i9t_B 1vkx_B* 3gut_B 2o61_B
Probab=91.92 E-value=0.28 Score=52.07 Aligned_cols=85 Identities=16% Similarity=0.176 Sum_probs=60.8
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCC-------eee-----eeEEeecCeeeeccCC-CC---
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE-------IEV-----PAEVLTDNVIRCQAPS-HA--- 502 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd-------~eV-----pae~~~~GvLrC~~Pp-h~--- 502 (706)
..|.+++-.-|++.||.||.++|..+.- -...|.|=+ -|. ++.+.....|+|.+|| +.
T Consensus 210 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K------~Di~VrF~E~~~~g~~WE~~g~f~~~Dvh~Q~AIvfkTPpY~~~~I 283 (325)
T 1nfk_A 210 LKIVRMDRTAGCVTGGEEIYLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNI 283 (325)
T ss_dssp CCEEEESCSCEESSCCCEEEEEESCCCT------TTEEEEEEECCCSSCCEEEECBCCGGGBCTTSEEEEECCCTTSSCC
T ss_pred CeEEEecCCccccCCCCEEEEEeccccc------CCCEEEEEEeCCCCCeeEEeeeeCHHHccceeEEEEECCCCCCCCc
Confidence 3799999999999999999999996531 134454422 122 3444556779999999 43
Q ss_pred --CceeeEEEEeCCCcccCceeeeeeecC
Q 005246 503 --AGRVPFYITGSNRLACSEVREFEYREK 529 (706)
Q Consensus 503 --pG~Vpl~Vt~~n~~~cSEvreFEYr~~ 529 (706)
|=.|-|++.-.....|||...|+|...
T Consensus 284 ~~pV~V~iqL~r~sd~~~Sep~~FtY~P~ 312 (325)
T 1nfk_A 284 TKPASVFVQLRRKSDLETSEPKPFLYYPE 312 (325)
T ss_dssp CSSEEEEEEEEETTTCCBCCCEEEEEECC
T ss_pred CCCeEEEEEEEcCCCCCccCCccceeecC
Confidence 445666666555557899999999874
No 134
>1a3q_A Protein (nuclear factor kappa-B P52); transcription factor, immune response, DNA-protein complex, transcription/DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 3do7_B 3jv6_B 3jv5_A
Probab=91.79 E-value=0.33 Score=50.75 Aligned_cols=82 Identities=15% Similarity=0.146 Sum_probs=59.1
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCC-----eeee-----eEEeecCeeeeccCC-CC-----C
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE-----IEVP-----AEVLTDNVIRCQAPS-HA-----A 503 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd-----~eVp-----ae~~~~GvLrC~~Pp-h~-----p 503 (706)
.|.+++=.-|++.||.||.++|..+.- -...|.|=+ -|.- +.+.....|+|.+|| +. |
T Consensus 187 ~I~r~s~~sg~v~GG~Ev~Llc~kv~K------~Di~V~F~E~~~~gWE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I~~p 260 (285)
T 1a3q_A 187 KISRMDKTAGSVRGGDEVYLLCDKVQK------DDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIERP 260 (285)
T ss_dssp CEEEESCSEEETTCCCEEEEEESSCCT------TTEEEEEEECSSSCEEEECBCCGGGEETTTEEEEECCCCSCTTCSSC
T ss_pred eEEEecCCccccCCCCEEEEEeccccC------CCCEEEEEecCCCCCEEeeEeCHHHccceeeEEEECCCCCCCCCCCC
Confidence 699999999999999999999996532 124444433 2333 344556779999999 43 4
Q ss_pred ceeeEEEEeCCCcccCceeeeeee
Q 005246 504 GRVPFYITGSNRLACSEVREFEYR 527 (706)
Q Consensus 504 G~Vpl~Vt~~n~~~cSEvreFEYr 527 (706)
=.|-|++.-.....+||...|+|.
T Consensus 261 V~V~iqL~r~sd~~~Sep~~FtY~ 284 (285)
T 1a3q_A 261 VTVFLQLKRKRGGDVSDSKQFTYY 284 (285)
T ss_dssp EEEEEEEEETTTCCBCCCEEEEEE
T ss_pred eEEEEEEEeCCCCCccCCCCceeC
Confidence 456666665455668999999995
No 135
>1p7h_L Nuclear factor of activated T-cells, cytoplasmic 2; DNA binding protein, transcription regulation, activator, transcription/DNA complex; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 2o93_L 1a02_N* 1pzu_B 1owr_M 2as5_N 1s9k_C 3qrf_N 1nfa_A 1a66_A*
Probab=91.54 E-value=0.3 Score=51.09 Aligned_cols=82 Identities=15% Similarity=0.293 Sum_probs=60.5
Q ss_pred CceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEee--------------CCeeeeeEEeecCeeeeccCC-C
Q 005246 437 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMF--------------GEIEVPAEVLTDNVIRCQAPS-H 501 (706)
Q Consensus 437 qlfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmF--------------Gd~eVpae~~~~GvLrC~~Pp-h 501 (706)
.+..|.+++-.-|++.||.||.++|..+.. .-.|.| |++. .++.....|+|.+|| +
T Consensus 184 ~~l~I~r~s~~sg~v~GG~Ei~Llc~kv~K-------DikVrF~E~~~dg~~~We~~g~f~--~dvh~Q~AIvfkTPpY~ 254 (286)
T 1p7h_L 184 ELPMVERQDTDSCLVYGGQQMILTGQNFTS-------ESKVVFTEKTTDGQQIWEMEATVD--KDKSQPNMLFVEIPEYR 254 (286)
T ss_dssp CCCEEEEESCSEEETTCCCEEEEEEESCCS-------SCEEEEEEECSSSCEEEEEEECBC--TTTCBTTEEEEECCCCS
T ss_pred CCCeEEEeccccccccCCcEEEEEecccCC-------CcEEEEEEECCCCCcceEEeEEeC--ccccccceEEEECCCCc
Confidence 356899999999999999999999997631 233433 4332 245667779999999 4
Q ss_pred C-----CceeeEEEEeCCCcccCceeeeeeec
Q 005246 502 A-----AGRVPFYITGSNRLACSEVREFEYRE 528 (706)
Q Consensus 502 ~-----pG~Vpl~Vt~~n~~~cSEvreFEYr~ 528 (706)
. |=.|-|++... ...+||...|+|..
T Consensus 255 ~~~I~~pV~V~~~l~r~-d~~~Sep~~FtY~P 285 (286)
T 1p7h_L 255 NKHIRTPVKVNFYVING-KRKRSQPQHFTYHP 285 (286)
T ss_dssp CTTCSSCEEEEEEEEET-TTEECCCEEEEEEC
T ss_pred cCccCCCeEEEEEEeCC-CCCcCCCcCceEec
Confidence 3 55666777666 44689999999964
No 136
>1svc_P Protein (nuclear factor kappa-B (NF-KB)); DNA-binding, transcription regulation, activator, nuclear protein, phosphorylation, repeat, DNA; HET: DNA; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=91.38 E-value=0.31 Score=52.44 Aligned_cols=85 Identities=16% Similarity=0.172 Sum_probs=61.1
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe-------ee-----eeEEeecCeeeeccCC-CC---
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI-------EV-----PAEVLTDNVIRCQAPS-HA--- 502 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-------eV-----pae~~~~GvLrC~~Pp-h~--- 502 (706)
..|.+++-.-|++.||.||.++|..+.- -...|.|=+. |. ++.+.....|+|.+|| +.
T Consensus 250 L~I~R~s~~sgsv~GG~Ev~LLc~Kv~K------~DikVrF~E~~~~g~~WE~~g~f~~~DVH~Q~AIvfkTPpY~~~~I 323 (365)
T 1svc_P 250 LKIVRMDRTAGCVTGGEEIYLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDINI 323 (365)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESSCCG------GGCEEEEEEEETTTEEEEEECBCCGGGEETTTEEEEECCCCSCSCC
T ss_pred CeEEEecCCccccCCCCEEEEEeccccc------CCCEEEEEEeCCCCCeeEEeeeeChHHhcceeeEEEECCCCCCCCc
Confidence 3799999999999999999999996531 1344555432 22 3455566789999999 43
Q ss_pred --CceeeEEEEeCCCcccCceeeeeeecC
Q 005246 503 --AGRVPFYITGSNRLACSEVREFEYREK 529 (706)
Q Consensus 503 --pG~Vpl~Vt~~n~~~cSEvreFEYr~~ 529 (706)
|=.|-|++.-.....|||...|+|...
T Consensus 324 ~~pV~V~iqL~R~sd~~~Sep~~FtY~P~ 352 (365)
T 1svc_P 324 TKPASVFVQLRRKSDLETSEPKPFLYYPE 352 (365)
T ss_dssp SSCEEEEEEEECTTTCCBCCCEEEEEECC
T ss_pred CCCeEEEEEEEcCCCCCccCCccceeecC
Confidence 445556665544457899999999874
No 137
>1ikn_A P65, protein (NF-kappa-B P65 subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 1nfi_A 2ram_A* 1ram_A* 2i9t_A 1lei_A* 1le9_A 1le5_A* 1vkx_A* 3gut_A
Probab=90.96 E-value=0.4 Score=50.13 Aligned_cols=85 Identities=16% Similarity=0.174 Sum_probs=59.1
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe--eee-----eEEeecCeeeeccCC-CC-----Cce
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--EVP-----AEVLTDNVIRCQAPS-HA-----AGR 505 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~--eVp-----ae~~~~GvLrC~~Pp-h~-----pG~ 505 (706)
..|.+++=.-|++.||.||.++|..+.- -...|.|=+. |.- +.+.....|+|.+|| |. |=.
T Consensus 176 L~I~r~s~~sg~v~GG~Ev~Llc~kv~K------~di~V~F~e~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I~~pV~ 249 (286)
T 1ikn_A 176 LKICRVNRNSGSCLGGDEIFLLCDKVQK------EDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVR 249 (286)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCT------TSCEEEEEETTEEEECBCCGGGBCTTSEEEEECCCCSCTTCSSCEE
T ss_pred CeEEEecCCccccCCCCEEEEEeccccc------CCCEEEEeccceEEeeecCHHHhccceeEEEECCCCCCCCcCCCEE
Confidence 3799999999999999999999996631 0233333221 333 334456779999999 43 335
Q ss_pred eeEEEEeCCCcccCceeeeeeecC
Q 005246 506 VPFYITGSNRLACSEVREFEYREK 529 (706)
Q Consensus 506 Vpl~Vt~~n~~~cSEvreFEYr~~ 529 (706)
|-|++.-.....+||...|+|...
T Consensus 250 V~i~L~r~sd~~~Sep~~FtY~P~ 273 (286)
T 1ikn_A 250 VSMQLRRPSDRELSEPMEFQYLPD 273 (286)
T ss_dssp EEEEEECTTTCCBCCCEEEEEECC
T ss_pred EEEEEEeCCCCCcCCCcCcEEecC
Confidence 555665544566899999999874
No 138
>2o61_A Transcription factor P65/interferon regulatory FA 7/interferon regulatory factor...; protein-DNA complex, transcription-DNA complex; 2.80A {Homo sapiens}
Probab=90.26 E-value=0.4 Score=54.17 Aligned_cols=85 Identities=18% Similarity=0.173 Sum_probs=59.9
Q ss_pred EEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe--ee-----eeEEeecCeeeeccCC-C-----CCcee
Q 005246 440 SIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--EV-----PAEVLTDNVIRCQAPS-H-----AAGRV 506 (706)
Q Consensus 440 sI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~--eV-----pae~~~~GvLrC~~Pp-h-----~pG~V 506 (706)
.|.++|-.-|++.||.||.|+|..+.- -...|.|=+. |. ++++.....|+|.+|| + .|=.|
T Consensus 178 ~I~r~s~~sgsv~GG~Ev~LLc~kv~K------~DikVrF~e~~WE~~a~f~~~Dvh~Q~AIvfkTPpY~~~~I~~pV~V 251 (540)
T 2o61_A 178 KICRVNRNSGSCLGGDEIFLLCDKVQK------EDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRV 251 (540)
T ss_dssp CEEEESCSEEETTCCCEEEEEESSCBT------TBCEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSSCCSSCEEE
T ss_pred eEEEecCCccccCCCCeEEEEeccccc------CCcEEEEecccceeccccChhhhcceeeEEEeCCCCCCCCCCCCeEE
Confidence 699999999999999999999996532 1234444322 22 3456667889999999 4 33355
Q ss_pred eEEEEeCCCcccCceeeeeeecCC
Q 005246 507 PFYITGSNRLACSEVREFEYREKP 530 (706)
Q Consensus 507 pl~Vt~~n~~~cSEvreFEYr~~~ 530 (706)
-|+|.-.....+||...|+|....
T Consensus 252 ~iqL~r~sd~~~Sep~~FtY~P~~ 275 (540)
T 2o61_A 252 SMQLRRPSDRELSEPMEFQYLPDG 275 (540)
T ss_dssp EEEEECGGGCCBCCCEEEEEECC-
T ss_pred EEEEEeCCCCCcCCCcCcEEecCC
Confidence 556654345568999999998643
No 139
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=90.22 E-value=0.54 Score=51.43 Aligned_cols=79 Identities=19% Similarity=0.174 Sum_probs=56.8
Q ss_pred CceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCC-eeee-eEEe--ecCeeeeccCC-CC--CceeeEE
Q 005246 437 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE-IEVP-AEVL--TDNVIRCQAPS-HA--AGRVPFY 509 (706)
Q Consensus 437 qlfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd-~eVp-ae~~--~~GvLrC~~Pp-h~--pG~Vpl~ 509 (706)
..++|+.++|+.+ ..|..|+|.|.+|.. .-.|.||. +++. ...+ ++..|+-.+|. .. +|.|.
T Consensus 112 PaPtITSISpe~~--~aGd~VTItGsNF~~-------iskV~FgG~veaT~~~svs~S~T~ItVtVPaGA~~~sG~It-- 180 (439)
T 3orj_A 112 AAPSITKISNCMP--NVGEPIIVYGSGLTE-------IAKVVFPGNVVVTEGIISDLDGEYFMVDMPAGVSEEGGSIF-- 180 (439)
T ss_dssp SCCEEEEESCSSC--CTTCEEEEEEECCTT-------CCEEEETTTEEECSSCEECTTSSEEEEECCTTCCTTCBCCE--
T ss_pred CCCEEEEeCCCCC--CCCCEEEEEccCCCc-------eeEEEECCCeeEEEEEEecCCCCEEEEEecCCCcCCCceEE--
Confidence 3568999999876 578999999999965 37899985 6665 2334 67889999999 45 57776
Q ss_pred EEeCCCcccCceeeeeeecC
Q 005246 510 ITGSNRLACSEVREFEYREK 529 (706)
Q Consensus 510 Vt~~n~~~cSEvreFEYr~~ 529 (706)
|...++.+.+ .|.|+++
T Consensus 181 VvT~~GtA~S---~~~f~dk 197 (439)
T 3orj_A 181 VEGSNGGAYS---PAYFNYK 197 (439)
T ss_dssp EEETTEEEEC---CSCBTCG
T ss_pred EEeCCCcEee---eEEEccC
Confidence 4455555433 3555554
No 140
>1imh_C NF-AT5, tonebp, nuclear factor of activated T cells 5; beta barrel, protein-DNA complex, double helix, DNA encirclement, transcription/DNA complex; 2.86A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=89.52 E-value=0.85 Score=47.54 Aligned_cols=87 Identities=22% Similarity=0.298 Sum_probs=59.1
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCCCC-------CCCCCceEEeeCCeeeeeEEeecCeeeeccCC-C-----CCc
Q 005246 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKK-------LSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-H-----AAG 504 (706)
Q Consensus 438 lfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~-------~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp-h-----~pG 504 (706)
...|.++|-.-|++.||.||.++|..+...- ......|.- ||++. ++. +....|+|.+|| + .|=
T Consensus 181 ~l~I~r~s~~sg~v~GG~Ev~Llc~kv~KdikVrF~E~~~d~~~WE~-~~~f~-~~d-vhQ~aIvf~tPpY~~~~I~~pV 257 (281)
T 1imh_C 181 VPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKS-EAEID-MEL-FHQNHLIVKVPPYHDQHITLPV 257 (281)
T ss_dssp CCEEEEESCCEEETTCCCEEEEEEECCCTTCEEEEESSSCTTCSCEE-EECBC-GGG-CCSSEEEEECCCCSCTTCSSCE
T ss_pred CCeEEEEecCccccCCCcEEEEEeeccCCCcEEEEEEeCCCCCceEE-eEEeC-hhh-cccceEEEECCCCccCccCCCe
Confidence 5689999999999999999999998553100 001124432 44443 222 346789999999 4 344
Q ss_pred eeeEEEEeCCCcccCceeeeeeec
Q 005246 505 RVPFYITGSNRLACSEVREFEYRE 528 (706)
Q Consensus 505 ~Vpl~Vt~~n~~~cSEvreFEYr~ 528 (706)
.|-|++.- +...+|+...|+|..
T Consensus 258 ~V~iqL~r-sd~~~S~p~~FtY~P 280 (281)
T 1imh_C 258 SVGIYVVT-NAGRSHDVQPFTYTP 280 (281)
T ss_dssp EEEEEEEE-TTEECCSCEEEEEEC
T ss_pred EEEEEEEe-CCCCccCCcCceecC
Confidence 56667665 445679999999964
No 141
>1gji_A C-REL protein, C-REL proto-oncogene protein; NF-KB/DNA complex, transcription factor, C-REL homodimer, transcription/DNA complex; 2.85A {Gallus gallus} SCOP: b.1.18.1 b.2.5.3
Probab=88.89 E-value=0.58 Score=48.68 Aligned_cols=84 Identities=15% Similarity=0.141 Sum_probs=58.7
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCe--ee-----eeEEeecCeeeeccCC-C----CCcee
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEI--EV-----PAEVLTDNVIRCQAPS-H----AAGRV 506 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~--eV-----pae~~~~GvLrC~~Pp-h----~pG~V 506 (706)
..|.+++=.-|++.||.||.++|..+.- -...|.|=+. |. ++.+.....|+|.+|| + .|=.|
T Consensus 179 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K------~di~VrF~e~~We~~~~f~~~Dvh~Q~AIvf~TPpY~~~I~~pV~V 252 (275)
T 1gji_A 179 LRICRVNKNCGSVKGGDEIFILCDKVQK------DDIEVRFVLDNWEAKGSFSQADVHRQVAIVFRTPPFLRDITEPITV 252 (275)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCG------GGCEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSCCSSCEEE
T ss_pred CEEEEeeCCccccCCCCEEEEEeccccc------CCCEEEEEccceeeccccChhhhcceeeEEEeCCCCCcCCCCCEEE
Confidence 4699999999999999999999996531 1234444331 22 3455677789999999 4 23345
Q ss_pred eEEEEeCCCcccCceeeeeeec
Q 005246 507 PFYITGSNRLACSEVREFEYRE 528 (706)
Q Consensus 507 pl~Vt~~n~~~cSEvreFEYr~ 528 (706)
-+++.-.....+||...|+|..
T Consensus 253 ~iqL~r~sd~~~Sep~~FtY~P 274 (275)
T 1gji_A 253 KMQLRRPSDQEVSEPMDFRYLP 274 (275)
T ss_dssp EEEEEEGGGTEECCCEEEEEEC
T ss_pred EEEEEcCCCCCccCCcCcEEcC
Confidence 5555544445589999999964
No 142
>3brd_A LIN-12 and GLP-1 phenotype protein 1, isoform A; protein-DNA complex, signaling, transcription, notch; HET: DNA; 2.21A {Caenorhabditis elegans} SCOP: b.1.18.1 b.2.5.8 b.42.7.1 PDB: 2fo1_A 1ttu_A* 3brf_A*
Probab=81.64 E-value=2.8 Score=46.28 Aligned_cols=82 Identities=16% Similarity=0.262 Sum_probs=59.5
Q ss_pred eEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCC----CC------------
Q 005246 439 FSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS----HA------------ 502 (706)
Q Consensus 439 fsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pp----h~------------ 502 (706)
|-|.+..|.-|- ++-.-+-|.|.+|.. ++.|.||++++-+.+-.+-.|.|..|+ +.
T Consensus 376 vP~V~~~~~~g~-g~~~mlel~G~nF~~-------~l~VWfG~~~aeT~~r~~e~l~c~vP~~s~~~~~~~~w~~~~~~~ 447 (477)
T 3brd_A 376 CPVVGSLEVDGH-GEASRVELHGRDFKP-------NLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTT 447 (477)
T ss_dssp CCEEEEEEEECS-GGGCEEEEEEECCCT-------TEEEEETTEEECEEEEETTEEEEECCCHHHHSCTTTHHHHBCTTT
T ss_pred CCeeeEEeecCC-CceeEEEEEcccCCC-------CCeEEECCccceeeEEccceeeccCCCHHHhCccccccccccccC
Confidence 335555554331 113567788998854 899999999998888889999999998 44
Q ss_pred -CceeeEEEEeCCCcccCceeeeeeec
Q 005246 503 -AGRVPFYITGSNRLACSEVREFEYRE 528 (706)
Q Consensus 503 -pG~Vpl~Vt~~n~~~cSEvreFEYr~ 528 (706)
|-.|||-+.-.++..-.--..|+|..
T Consensus 448 ~~~~vPl~LVr~dGviy~t~~tf~y~p 474 (477)
T 3brd_A 448 GDVEVPISLVRDDGVVYSSGLTFSYKS 474 (477)
T ss_dssp CCBEEEEEEEETTSEEEEEEEEEETTC
T ss_pred CceEeeEEEEecCCEEEecCceEEecc
Confidence 44499988877777655566777754
No 143
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=61.86 E-value=24 Score=41.09 Aligned_cols=87 Identities=16% Similarity=0.251 Sum_probs=55.9
Q ss_pred cCceEEEeecCCCccCC-CceEEEEEccCCCCCCCCCCCceEEeeCCe-eeeeEEeecCeeeeccCC------CCCc---
Q 005246 436 EQLFSIRDFSPDWAYSG-AETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNVIRCQAPS------HAAG--- 504 (706)
Q Consensus 436 ~qlfsI~d~sP~wg~~~-ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~-eVpae~~~~GvLrC~~Pp------h~pG--- 504 (706)
.|=..|+ +.|.--..+ ..+.|++...++.. +. .+|.|.||+. +.+|.+ ..+.+.|..|+ -.+|
T Consensus 526 ~qC~~i~-~~P~~~s~~~~~~~v~l~v~~lP~---l~-~~~~C~fg~~~~~~a~~-~~~~v~C~sP~~~~~p~~p~g~d~ 599 (681)
T 3oky_A 526 SQCMSLE-VHPNSISVSDHSRLLSLVVNDAPN---LS-EGIACAFGNLTEVEGQV-SGSQVICISPGPKDVPVIPLDQDW 599 (681)
T ss_dssp GGCCEEE-EESSEEETTSCSCEEEEEEETCCC---CT-TCEEEEETTTEEEECEE-ETTEEEEECCCTTTSCCCC--CCE
T ss_pred Cccceee-ecCccccccccccEEEEeccCCCC---CC-CCCEEEcCCccccccee-cCCeeEeCCCCHHhCCCCCCCceE
Confidence 4566785 888877664 46788887777743 22 3599999996 777754 77788998776 2345
Q ss_pred -eeeEEEEeCC-CcccCceeeeeeecC
Q 005246 505 -RVPFYITGSN-RLACSEVREFEYREK 529 (706)
Q Consensus 505 -~Vpl~Vt~~n-~~~cSEvreFEYr~~ 529 (706)
.|+|++.... +.. --..+|.|-+=
T Consensus 600 ~~v~l~l~~~~~~~~-~~s~~f~FYdC 625 (681)
T 3oky_A 600 FGLELQLRSKETGKI-FVSTEFKFYNC 625 (681)
T ss_dssp EEEEEEEEETTTCCE-EEEEEEEEECC
T ss_pred EEEEEEEEeccCCCc-eeEEeeEEEcC
Confidence 3677777642 221 12356777653
No 144
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.31 E-value=8.4 Score=35.65 Aligned_cols=29 Identities=28% Similarity=0.685 Sum_probs=21.0
Q ss_pred EEeecccCCCcccceeeeeccCCCcceEEEe
Q 005246 101 CYYAHGEDNENFQRRSYWMLDGQLEHIVLVH 131 (706)
Q Consensus 101 ~~y~h~~~~~~f~rr~yw~l~~~~~~ivlvh 131 (706)
.|-+|--..-+-+||-||.||.. .|.|.+
T Consensus 12 GWmVH~t~~d~~rKRHYWrLD~K--~Itlf~ 40 (129)
T 2d9z_A 12 GWMVHYTSRDNLRKRHYWRLDSK--CLTLFQ 40 (129)
T ss_dssp EEEEEEESSCCCCEEEEEEEESS--CEEEES
T ss_pred ceEEEEccCCccccceeeEecCC--eEEEEe
Confidence 56667555555699999999964 577754
No 145
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=48.20 E-value=17 Score=39.91 Aligned_cols=69 Identities=10% Similarity=0.069 Sum_probs=51.0
Q ss_pred cCCCceEEEEEccCCCCCCCCCCCceEEeeCCeee--eeEEeecCeeeeccCC-CCCc------eeeEEEEeCCCcccCc
Q 005246 450 YSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEV--PAEVLTDNVIRCQAPS-HAAG------RVPFYITGSNRLACSE 520 (706)
Q Consensus 450 ~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eV--pae~~~~GvLrC~~Pp-h~pG------~Vpl~Vt~~n~~~cSE 520 (706)
...-|..|+|.|..|.+ .-.|.||+++| ...++.+..|+-.+|. -.+| ...++|.-+++. -
T Consensus 34 ~a~pGd~ItItGsNL~~-------vtkV~FNdvea~fnstyiTdtsI~VtIPs~aP~G~vd~~VtnkI~VvTdgGt---~ 103 (439)
T 3orj_A 34 FARLGQLIRIEGEGFNG-------LKKVYINGYNCYFNPVFVSNKSFLVSVNSKVPTTEADENVRNTIRLVKDGGE---Y 103 (439)
T ss_dssp EEETTCEEEEEEECCTT-------CCEEEETTEECCBCGGGCCSSEEEEECCTTCCSTTSCTTTTTEEEEEETTEE---E
T ss_pred cccCCCEEEEEeeCCCC-------eeEEEECCEEeeeccccccCCEEEEEcCCCCCCccccccccceEEEEECCCE---E
Confidence 45578999999999965 46899999988 4567899999999998 4445 446777765553 2
Q ss_pred eeeeeeec
Q 005246 521 VREFEYRE 528 (706)
Q Consensus 521 vreFEYr~ 528 (706)
...|++..
T Consensus 104 ty~FtVla 111 (439)
T 3orj_A 104 VYDFQIRA 111 (439)
T ss_dssp EEECEEEC
T ss_pred eeeeEEec
Confidence 23566554
No 146
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}
Probab=30.48 E-value=15 Score=31.00 Aligned_cols=8 Identities=75% Similarity=1.527 Sum_probs=7.3
Q ss_pred ccCcceee
Q 005246 70 KDGHRWRK 77 (706)
Q Consensus 70 kdg~~w~k 77 (706)
.|||.|||
T Consensus 15 ~DGy~WRK 22 (76)
T 2ayd_A 15 NDGYRWRK 22 (76)
T ss_dssp CCSSCEEE
T ss_pred CCCchhhh
Confidence 59999998
No 147
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*
Probab=28.09 E-value=15 Score=31.22 Aligned_cols=10 Identities=60% Similarity=1.069 Sum_probs=8.0
Q ss_pred hccCcceeec
Q 005246 69 RKDGHRWRKK 78 (706)
Q Consensus 69 rkdg~~w~kk 78 (706)
-.|||.|||=
T Consensus 17 ~dDGy~WRKY 26 (78)
T 1wj2_A 17 LDDGYRWRKY 26 (78)
T ss_dssp CCSSSCBCCC
T ss_pred CCCCchhhhC
Confidence 3699999874
No 148
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=24.28 E-value=2.1e+02 Score=32.80 Aligned_cols=66 Identities=26% Similarity=0.278 Sum_probs=50.5
Q ss_pred ceEEEeecCCCccCCCceEEEEEccCCCCCCCCCCCceEEeeCCeeeeeEEeecCeeeeccCCCCCceeeEEEE
Q 005246 438 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYIT 511 (706)
Q Consensus 438 lfsI~d~sP~wg~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd~eVpae~~~~GvLrC~~Pph~pG~Vpl~Vt 511 (706)
.+.|..+-|.-| ..|..|+|.|..+.+. .-.+.||..+....-|++|.+.-.+|...+|.+.+.|+
T Consensus 498 ~p~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~v~ 563 (686)
T 1qho_A 498 APQIGSVAPNMG--IPGNVVTIDGKGFGTT------QGTVTFGGVTATVKSWTSNRIEVYVPNMAAGLTDVKVT 563 (686)
T ss_dssp SCEEEEEESSEE--CTTCEEEEEEECCCSS------CCEEEETTEECCEEEECSSEEEEECCSCCCEEEEEEEE
T ss_pred CCcccccccccc--CCCCEEEEEeecCCCc------ceEEEEecceeeEEEcCCCcEEEecCCCCCCceEEEEe
Confidence 445777766442 2356689999877542 12499999988888899999998999889999999998
No 149
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=20.81 E-value=84 Score=28.86 Aligned_cols=30 Identities=27% Similarity=0.635 Sum_probs=22.7
Q ss_pred EEEeecccCCCcccceeeeeccCCCcceEEEe
Q 005246 100 HCYYAHGEDNENFQRRSYWMLDGQLEHIVLVH 131 (706)
Q Consensus 100 ~~~y~h~~~~~~f~rr~yw~l~~~~~~ivlvh 131 (706)
-.|-+|--..-.=+||-||.||.. -|.|-+
T Consensus 11 eGW~VH~t~~d~~rKRHYWrLD~K--~Itlf~ 40 (125)
T 2coa_A 11 EGWVVHYSNKDTLRKRHYWRLDCK--CITLFQ 40 (125)
T ss_dssp EEEEEECCSSSCCCEEEEEEECSS--EEEEES
T ss_pred cceEEEEccCCccccceeeEecCC--eEEEEe
Confidence 367788776667789999999964 577654
Done!