Query 005248
Match_columns 706
No_of_seqs 385 out of 1257
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 19:50:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005248.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005248hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g9p_A 4-hydroxy-3-methylbut-2 100.0 4E-128 1E-132 1026.0 31.2 248 82-352 2-269 (406)
2 3noy_A 4-hydroxy-3-methylbut-2 100.0 3E-127 1E-131 1007.3 31.0 323 82-706 10-335 (366)
3 4g9p_A 4-hydroxy-3-methylbut-2 99.7 1.5E-17 5.3E-22 178.1 4.9 153 550-706 202-373 (406)
4 3noy_A 4-hydroxy-3-methylbut-2 99.6 1.2E-16 4E-21 169.3 4.8 68 550-620 183-250 (366)
5 1zco_A 2-dehydro-3-deoxyphosph 99.4 6E-12 2.1E-16 128.2 15.6 188 87-331 9-220 (262)
6 3nvt_A 3-deoxy-D-arabino-heptu 98.6 8.7E-07 3E-11 95.1 16.6 144 89-281 129-284 (385)
7 4g38_A SIR-HP, sirhp, sulfite 97.9 5.2E-06 1.8E-10 92.9 4.8 99 606-706 386-505 (570)
8 1tx2_A DHPS, dihydropteroate s 97.7 0.0029 9.8E-08 66.0 20.3 196 115-344 60-275 (297)
9 1aop_A Sirhp, sulfite reductas 97.6 2.5E-05 8.6E-10 85.5 4.4 101 603-705 310-431 (497)
10 4djd_C C/Fe-SP, corrinoid/iron 97.5 0.0014 4.6E-08 72.0 16.2 214 79-345 52-294 (446)
11 1eye_A DHPS 1, dihydropteroate 97.5 0.0064 2.2E-07 62.8 19.6 195 114-345 25-255 (280)
12 1zj8_A Probable ferredoxin-dep 97.5 0.0001 3.4E-09 82.3 6.0 87 609-697 383-491 (566)
13 2h9a_B CO dehydrogenase/acetyl 97.3 0.017 6E-07 60.5 20.1 224 87-362 13-306 (310)
14 2h9a_A Carbon monoxide dehydro 97.3 0.009 3.1E-07 65.5 18.6 202 86-344 59-292 (445)
15 2vp8_A Dihydropteroate synthas 97.3 0.012 4.2E-07 61.9 18.7 197 114-345 61-289 (318)
16 2yci_X 5-methyltetrahydrofolat 97.2 0.014 4.7E-07 59.9 18.3 211 94-344 1-237 (271)
17 3k13_A 5-methyltetrahydrofolat 97.1 0.012 4E-07 61.5 16.9 214 95-345 3-254 (300)
18 2y5s_A DHPS, dihydropteroate s 97.1 0.016 5.4E-07 60.4 17.0 193 115-345 43-272 (294)
19 1aj0_A DHPS, dihydropteroate s 97.0 0.02 6.7E-07 59.2 17.0 198 114-345 34-257 (282)
20 1q7z_A 5-methyltetrahydrofolat 97.0 0.017 5.9E-07 64.8 17.4 189 115-345 337-538 (566)
21 1f6y_A 5-methyltetrahydrofolat 96.9 0.044 1.5E-06 55.8 17.9 190 115-345 22-229 (262)
22 4h3d_A 3-dehydroquinate dehydr 96.8 0.076 2.6E-06 53.9 18.5 208 88-337 5-230 (258)
23 2dqw_A Dihydropteroate synthas 96.7 0.039 1.3E-06 57.5 16.3 193 115-345 49-270 (294)
24 1vs1_A 3-deoxy-7-phosphoheptul 96.5 0.052 1.8E-06 55.9 15.4 143 87-279 23-178 (276)
25 3tr9_A Dihydropteroate synthas 96.4 0.097 3.3E-06 55.2 17.3 195 114-345 45-274 (314)
26 3o1n_A 3-dehydroquinate dehydr 96.3 0.13 4.4E-06 52.9 17.0 197 89-328 26-239 (276)
27 4hb7_A Dihydropteroate synthas 96.2 0.2 6.8E-06 51.9 18.1 188 115-345 27-244 (270)
28 2yr1_A 3-dehydroquinate dehydr 96.2 0.3 1E-05 49.5 19.1 195 89-328 6-218 (257)
29 4djd_D C/Fe-SP, corrinoid/iron 96.2 0.064 2.2E-06 56.6 14.2 149 118-313 80-253 (323)
30 1vr6_A Phospho-2-dehydro-3-deo 96.0 0.13 4.5E-06 54.8 15.7 143 88-279 92-246 (350)
31 3cqj_A L-ribulose-5-phosphate 95.9 0.09 3.1E-06 51.7 13.1 151 101-281 16-195 (295)
32 1y0e_A Putative N-acetylmannos 95.9 0.26 9E-06 47.2 16.1 176 101-344 6-203 (223)
33 2vef_A Dihydropteroate synthas 95.4 0.23 7.7E-06 52.1 14.5 167 115-315 30-236 (314)
34 3dx5_A Uncharacterized protein 95.4 0.36 1.2E-05 47.0 15.0 152 104-285 3-175 (286)
35 1nvm_A HOA, 4-hydroxy-2-oxoval 95.1 0.42 1.4E-05 50.0 15.4 152 113-311 25-199 (345)
36 3mcm_A 2-amino-4-hydroxy-6-hyd 94.7 0.18 6.1E-06 55.4 11.9 197 115-344 209-439 (442)
37 1k77_A EC1530, hypothetical pr 94.6 0.23 7.9E-06 47.5 11.1 144 114-285 14-181 (260)
38 2wqp_A Polysialic acid capsule 94.3 0.6 2.1E-05 49.8 14.4 198 89-350 5-241 (349)
39 3qc0_A Sugar isomerase; TIM ba 94.2 0.33 1.1E-05 46.7 11.1 123 101-237 4-142 (275)
40 2rdx_A Mandelate racemase/muco 93.5 0.49 1.7E-05 49.6 11.9 107 98-238 186-295 (379)
41 1xla_A D-xylose isomerase; iso 93.5 0.25 8.6E-06 51.8 9.6 159 100-281 21-215 (394)
42 2ftp_A Hydroxymethylglutaryl-C 93.3 2.1 7.2E-05 43.8 16.0 161 114-298 26-199 (302)
43 1ydn_A Hydroxymethylglutaryl-C 93.2 1 3.6E-05 45.6 13.3 161 114-299 22-196 (295)
44 3kws_A Putative sugar isomeras 93.1 0.89 3.1E-05 44.4 12.4 131 102-274 26-160 (287)
45 3p3b_A Mandelate racemase/muco 93.1 0.17 5.9E-06 53.5 7.7 112 98-237 198-311 (392)
46 1yxy_A Putative N-acetylmannos 92.9 0.85 2.9E-05 44.1 11.8 110 99-240 15-140 (234)
47 2pgw_A Muconate cycloisomerase 92.9 0.45 1.5E-05 50.0 10.5 109 98-238 188-299 (384)
48 1i60_A IOLI protein; beta barr 92.9 0.5 1.7E-05 45.3 10.0 153 104-284 3-176 (278)
49 1wa3_A 2-keto-3-deoxy-6-phosph 92.8 0.4 1.4E-05 45.4 9.1 111 115-279 19-130 (205)
50 1vli_A Spore coat polysacchari 92.7 3.2 0.00011 44.9 16.9 199 89-350 14-253 (385)
51 3fs2_A 2-dehydro-3-deoxyphosph 92.5 1.4 4.7E-05 46.3 13.3 144 90-279 28-188 (298)
52 2qgy_A Enolase from the enviro 92.4 0.73 2.5E-05 48.6 11.4 111 98-239 191-304 (391)
53 2v82_A 2-dehydro-3-deoxy-6-pho 92.4 1.8 6.2E-05 41.2 13.2 90 115-238 16-108 (212)
54 3or1_A Sulfite reductase alpha 92.4 0.27 9.3E-06 53.9 8.3 60 641-701 173-243 (437)
55 2akj_A Ferredoxin--nitrite red 92.3 0.13 4.5E-06 58.2 5.8 58 640-698 482-546 (608)
56 3ble_A Citramalate synthase fr 92.2 2.3 7.8E-05 44.5 14.5 163 114-299 37-210 (337)
57 3igs_A N-acetylmannosamine-6-p 92.0 1.7 5.7E-05 43.3 12.7 122 104-279 22-155 (232)
58 2qkf_A 3-deoxy-D-manno-octulos 92.0 0.77 2.6E-05 47.3 10.6 146 90-281 2-164 (280)
59 1rvk_A Isomerase/lactonizing e 91.8 0.59 2E-05 48.8 9.6 112 98-241 197-312 (382)
60 3obe_A Sugar phosphate isomera 91.4 0.79 2.7E-05 46.2 9.8 118 99-238 18-168 (305)
61 3i4k_A Muconate lactonizing en 91.2 1.2 4.2E-05 46.9 11.4 114 98-242 191-307 (383)
62 3mqt_A Mandelate racemase/muco 91.2 0.55 1.9E-05 49.8 8.8 113 97-239 196-311 (394)
63 3mkc_A Racemase; metabolic pro 91.2 0.57 1.9E-05 49.8 8.8 113 97-239 201-316 (394)
64 1ps9_A 2,4-dienoyl-COA reducta 91.1 2.9 9.9E-05 46.8 14.8 207 90-312 8-248 (671)
65 3ngf_A AP endonuclease, family 91.0 0.89 3E-05 44.2 9.4 151 105-285 14-188 (269)
66 3qxb_A Putative xylose isomera 91.0 1.6 5.5E-05 43.6 11.4 162 102-283 20-214 (316)
67 2cw6_A Hydroxymethylglutaryl-C 90.7 2.8 9.6E-05 42.8 13.2 160 115-299 24-197 (298)
68 3q58_A N-acetylmannosamine-6-p 90.6 3.3 0.00011 41.1 13.3 122 104-279 22-155 (229)
69 2qw5_A Xylose isomerase-like T 90.5 1.7 5.8E-05 43.7 11.2 163 103-283 10-217 (335)
70 1vhc_A Putative KHG/KDPG aldol 90.4 1.6 5.5E-05 43.3 10.8 110 115-279 26-136 (224)
71 1mdl_A Mandelate racemase; iso 90.4 0.57 2E-05 48.5 7.8 109 98-237 186-297 (359)
72 1kcz_A Beta-methylaspartase; b 90.3 1.4 4.7E-05 47.0 10.9 100 116-237 250-358 (413)
73 2q02_A Putative cytoplasmic pr 90.2 1.4 4.8E-05 42.2 10.0 148 103-285 8-173 (272)
74 3b0g_A NII3, nitrite reductase 90.2 0.27 9.3E-06 55.4 5.6 56 641-697 465-527 (591)
75 1kko_A 3-methylaspartate ammon 90.2 1.1 3.8E-05 47.9 10.0 103 115-239 249-360 (413)
76 1muw_A Xylose isomerase; atomi 90.2 0.86 2.9E-05 47.6 9.0 144 121-281 36-215 (386)
77 1o60_A 2-dehydro-3-deoxyphosph 90.1 1.2 4E-05 46.3 9.9 147 89-281 4-167 (292)
78 2hzg_A Mandelate racemase/muco 89.9 0.99 3.4E-05 47.7 9.3 109 98-237 190-304 (401)
79 3ozy_A Putative mandelate race 89.8 0.91 3.1E-05 48.1 9.0 110 97-237 191-304 (389)
80 4e4u_A Mandalate racemase/muco 89.8 0.97 3.3E-05 48.4 9.2 109 98-237 198-309 (412)
81 3sjn_A Mandelate racemase/muco 89.7 0.85 2.9E-05 48.0 8.6 112 98-239 190-304 (374)
82 2ovl_A Putative racemase; stru 89.7 1.5 5.1E-05 45.8 10.4 109 98-237 188-299 (371)
83 3ivs_A Homocitrate synthase, m 89.4 10 0.00034 41.4 16.8 157 114-299 57-221 (423)
84 3mm5_A Sulfite reductase, diss 89.2 0.4 1.4E-05 52.2 5.7 58 641-699 172-240 (418)
85 3gd6_A Muconate cycloisomerase 89.2 6.2 0.00021 41.7 14.7 71 114-187 140-215 (391)
86 2nql_A AGR_PAT_674P, isomerase 89.0 0.7 2.4E-05 48.6 7.3 108 98-237 205-315 (388)
87 3vnd_A TSA, tryptophan synthas 88.8 2.2 7.4E-05 43.7 10.6 94 116-234 30-151 (267)
88 4e5t_A Mandelate racemase / mu 88.8 0.98 3.3E-05 48.1 8.3 109 98-237 205-316 (404)
89 3q45_A Mandelate racemase/muco 88.7 1.8 6.2E-05 45.4 10.2 113 97-240 180-295 (368)
90 3ewb_X 2-isopropylmalate synth 88.6 9.3 0.00032 39.2 15.2 158 115-299 24-191 (293)
91 3tva_A Xylose isomerase domain 88.6 3 0.0001 40.6 11.1 131 114-281 20-183 (290)
92 1nu5_A Chloromuconate cycloiso 88.6 1.3 4.5E-05 46.0 9.0 110 98-238 185-297 (370)
93 2zad_A Muconate cycloisomerase 88.6 2.6 9E-05 43.4 11.1 108 99-238 180-292 (345)
94 3go2_A Putative L-alanine-DL-g 88.5 0.96 3.3E-05 48.3 8.0 107 98-238 210-319 (409)
95 2gdq_A YITF; mandelate racemas 88.4 1.1 3.7E-05 47.2 8.2 109 98-237 181-293 (382)
96 2gl5_A Putative dehydratase pr 88.4 1.2 4.2E-05 47.0 8.7 109 98-237 215-326 (410)
97 2ps2_A Putative mandelate race 88.2 0.92 3.1E-05 47.3 7.5 111 98-242 187-301 (371)
98 2poz_A Putative dehydratase; o 88.1 1.4 4.7E-05 46.4 8.8 109 98-237 196-307 (392)
99 2qul_A D-tagatose 3-epimerase; 88.0 2.6 9.1E-05 40.7 10.2 158 103-285 3-188 (290)
100 3f4w_A Putative hexulose 6 pho 88.0 2.3 8E-05 40.2 9.6 122 112-280 7-134 (211)
101 3vni_A Xylose isomerase domain 87.9 3.4 0.00012 40.3 10.9 159 103-286 3-188 (294)
102 4dwd_A Mandelate racemase/muco 87.9 2.8 9.6E-05 44.6 11.1 111 98-239 188-300 (393)
103 3bjs_A Mandelate racemase/muco 87.9 1.7 5.9E-05 46.6 9.5 109 98-237 226-338 (428)
104 1chr_A Chloromuconate cycloiso 87.9 1.7 5.8E-05 45.5 9.3 114 97-241 184-300 (370)
105 3p6l_A Sugar phosphate isomera 87.8 1.8 6.3E-05 41.6 8.8 102 102-234 10-131 (262)
106 3v3w_A Starvation sensing prot 87.7 2.1 7.1E-05 46.0 10.1 110 98-238 223-335 (424)
107 1z41_A YQJM, probable NADH-dep 87.7 8.5 0.00029 39.9 14.3 207 90-312 8-249 (338)
108 3o07_A Pyridoxine biosynthesis 87.5 1 3.6E-05 47.1 7.2 154 121-299 80-251 (291)
109 2qde_A Mandelate racemase/muco 87.5 2.1 7.3E-05 45.1 9.8 112 98-240 186-300 (397)
110 1wbh_A KHG/KDPG aldolase; lyas 87.5 4.4 0.00015 39.8 11.4 92 114-238 24-116 (214)
111 1vzw_A Phosphoribosyl isomeras 87.5 1.5 5.2E-05 42.6 8.1 167 120-336 34-211 (244)
112 3jva_A Dipeptide epimerase; en 87.3 16 0.00056 37.9 16.2 71 113-186 136-210 (354)
113 1sjd_A N-acylamino acid racema 87.2 2.6 8.7E-05 43.8 10.1 112 98-241 180-294 (368)
114 3eeg_A 2-isopropylmalate synth 87.2 7.2 0.00025 40.7 13.5 140 117-285 27-174 (325)
115 1mxs_A KDPG aldolase; 2-keto-3 87.2 4.6 0.00016 40.1 11.4 90 116-238 36-126 (225)
116 2fym_A Enolase; RNA degradosom 86.9 4.2 0.00014 43.8 11.8 99 116-241 268-372 (431)
117 2hk0_A D-psicose 3-epimerase; 86.9 2.6 9.1E-05 41.7 9.7 155 103-285 22-206 (309)
118 2zvr_A Uncharacterized protein 86.9 6.3 0.00021 38.6 12.2 163 94-285 13-205 (290)
119 3eez_A Putative mandelate race 86.8 1 3.5E-05 47.5 7.0 111 98-242 186-299 (378)
120 2og9_A Mandelate racemase/muco 86.6 1.8 6.2E-05 45.6 8.7 107 98-235 204-313 (393)
121 3rcy_A Mandelate racemase/muco 86.5 1.2 4.2E-05 48.1 7.5 110 98-238 200-312 (433)
122 3tml_A 2-dehydro-3-deoxyphosph 86.4 4.7 0.00016 42.0 11.4 114 90-234 4-134 (288)
123 2o56_A Putative mandelate race 86.4 1.3 4.3E-05 46.8 7.3 109 98-237 212-323 (407)
124 1ydo_A HMG-COA lyase; TIM-barr 86.3 13 0.00043 38.5 14.6 159 115-299 25-198 (307)
125 3rr1_A GALD, putative D-galact 86.2 1.6 5.5E-05 46.7 8.1 110 98-238 175-287 (405)
126 1tkk_A Similar to chloromucona 85.9 1.9 6.4E-05 44.8 8.3 109 98-238 182-296 (366)
127 4dxk_A Mandelate racemase / mu 85.9 1.7 6E-05 46.1 8.2 111 98-239 207-320 (400)
128 4e38_A Keto-hydroxyglutarate-a 85.8 5.1 0.00018 40.4 11.1 111 114-279 42-153 (232)
129 3mwc_A Mandelate racemase/muco 85.7 2.2 7.5E-05 45.5 8.8 110 98-239 202-314 (400)
130 3r4e_A Mandelate racemase/muco 85.6 2.7 9.3E-05 45.0 9.5 111 98-239 217-330 (418)
131 3stp_A Galactonate dehydratase 85.6 1.6 5.6E-05 46.8 7.8 111 97-238 226-339 (412)
132 2bmb_A Folic acid synthesis pr 85.6 9.2 0.00032 43.1 14.0 201 116-345 247-525 (545)
133 3l23_A Sugar phosphate isomera 85.3 2.5 8.5E-05 42.4 8.6 110 101-233 12-159 (303)
134 2p8b_A Mandelate racemase/muco 85.3 1.1 3.7E-05 46.6 6.1 110 98-238 182-295 (369)
135 1tzz_A Hypothetical protein L1 85.2 3.2 0.00011 43.6 9.7 109 98-237 207-325 (392)
136 3vcn_A Mannonate dehydratase; 85.0 2 6.8E-05 46.2 8.1 109 98-237 224-335 (425)
137 3cny_A Inositol catabolism pro 85.0 2 6.7E-05 41.9 7.4 142 115-284 31-192 (301)
138 1bxb_A Xylose isomerase; xylos 84.9 4 0.00014 42.6 10.2 133 93-238 12-179 (387)
139 4fxs_A Inosine-5'-monophosphat 84.9 2.7 9.2E-05 46.2 9.3 99 120-234 232-337 (496)
140 2pp0_A L-talarate/galactarate 84.7 2.7 9.3E-05 44.4 8.9 107 98-235 217-326 (398)
141 3inp_A D-ribulose-phosphate 3- 84.7 4.3 0.00015 41.1 10.0 149 101-297 86-243 (246)
142 1xim_A D-xylose isomerase; iso 84.5 2.6 9E-05 44.1 8.6 150 113-281 31-215 (393)
143 3ktc_A Xylose isomerase; putat 84.5 0.6 2E-05 47.3 3.7 165 91-284 10-204 (333)
144 3jva_A Dipeptide epimerase; en 84.4 1.7 5.8E-05 45.3 7.1 112 98-240 180-294 (354)
145 3fcp_A L-Ala-D/L-Glu epimerase 84.3 3.4 0.00011 43.6 9.4 112 98-240 190-304 (381)
146 3mm5_B Sulfite reductase, diss 84.2 1.6 5.4E-05 46.3 6.9 56 641-697 130-195 (366)
147 3dip_A Enolase; structural gen 84.2 3.8 0.00013 43.8 9.9 111 98-239 210-324 (410)
148 3khj_A Inosine-5-monophosphate 83.6 8.7 0.0003 40.7 12.2 78 101-192 95-179 (361)
149 3ro6_B Putative chloromuconate 83.6 1.1 3.9E-05 46.6 5.4 112 98-240 181-296 (356)
150 2yw3_A 4-hydroxy-2-oxoglutarat 83.5 4.6 0.00016 39.3 9.3 88 116-238 23-111 (207)
151 1r0m_A N-acylamino acid racema 83.4 2.5 8.6E-05 44.0 7.9 93 121-241 205-300 (375)
152 2ztj_A Homocitrate synthase; ( 83.4 34 0.0012 36.3 16.7 154 114-298 21-184 (382)
153 3lmz_A Putative sugar isomeras 83.4 2.1 7.2E-05 41.3 6.8 103 103-235 19-130 (257)
154 2ox4_A Putative mandelate race 83.0 1.3 4.6E-05 46.5 5.7 109 98-237 206-317 (403)
155 1jpd_X L-Ala-D/L-Glu epimerase 82.8 6.1 0.00021 40.5 10.4 120 115-239 131-279 (324)
156 2qq6_A Mandelate racemase/muco 82.7 1.8 6.2E-05 45.8 6.6 109 98-237 207-318 (410)
157 3vav_A 3-methyl-2-oxobutanoate 82.7 17 0.00058 37.7 13.6 147 127-325 45-225 (275)
158 3or1_B Sulfite reductase beta; 82.6 1.5 5.2E-05 46.9 6.0 58 640-698 140-207 (386)
159 2qdd_A Mandelate racemase/muco 82.6 1.7 5.7E-05 45.5 6.2 68 144-238 225-295 (378)
160 3q58_A N-acetylmannosamine-6-p 82.4 4.8 0.00016 39.9 9.1 68 120-194 90-162 (229)
161 3tqp_A Enolase; energy metabol 82.4 5.7 0.0002 43.2 10.4 106 115-247 263-374 (428)
162 1rd5_A Tryptophan synthase alp 82.3 7.7 0.00026 38.4 10.6 106 112-243 26-155 (262)
163 3ddm_A Putative mandelate race 82.2 3.3 0.00011 44.0 8.3 108 98-236 196-307 (392)
164 3l5l_A Xenobiotic reductase A; 82.1 29 0.00099 36.4 15.4 214 90-312 7-266 (363)
165 3o1n_A 3-dehydroquinate dehydr 82.0 3.6 0.00012 42.2 8.3 53 114-166 172-226 (276)
166 1r30_A Biotin synthase; SAM ra 81.9 16 0.00055 37.7 13.2 141 114-314 98-245 (369)
167 3dgb_A Muconate cycloisomerase 81.8 3.7 0.00013 43.3 8.5 112 98-240 191-305 (382)
168 3i6e_A Muconate cycloisomerase 81.8 2.7 9.4E-05 44.4 7.5 96 117-240 205-303 (385)
169 3my9_A Muconate cycloisomerase 81.7 1.8 6E-05 45.6 6.0 110 98-238 188-300 (377)
170 4dye_A Isomerase; enolase fami 81.6 4.2 0.00015 43.3 9.0 93 116-238 224-319 (398)
171 4hpn_A Putative uncharacterize 81.2 4.8 0.00016 42.0 9.0 113 98-242 185-300 (378)
172 2rdx_A Mandelate racemase/muco 80.8 4.7 0.00016 42.1 8.8 68 115-185 144-215 (379)
173 3qtp_A Enolase 1; glycolysis, 80.7 3.7 0.00013 45.2 8.2 103 116-245 280-387 (441)
174 3igs_A N-acetylmannosamine-6-p 80.6 2.7 9.3E-05 41.8 6.6 68 120-194 90-162 (232)
175 3sz8_A 2-dehydro-3-deoxyphosph 80.5 14 0.00049 38.3 12.2 144 90-279 6-167 (285)
176 2zad_A Muconate cycloisomerase 80.4 55 0.0019 33.5 16.9 161 115-300 138-310 (345)
177 3tj4_A Mandelate racemase; eno 79.9 3.4 0.00012 43.3 7.5 108 98-236 194-304 (372)
178 3gd6_A Muconate cycloisomerase 79.9 4.2 0.00014 43.0 8.2 112 98-241 183-299 (391)
179 1sfl_A 3-dehydroquinate dehydr 79.8 3.9 0.00013 40.8 7.5 53 113-166 137-191 (238)
180 3r0u_A Enzyme of enolase super 79.7 7.3 0.00025 41.2 9.9 113 98-240 183-299 (379)
181 3nav_A Tryptophan synthase alp 79.7 11 0.00038 38.6 11.0 115 81-234 11-153 (271)
182 2oz8_A MLL7089 protein; struct 79.7 12 0.00042 39.3 11.6 106 98-237 187-296 (389)
183 2hxt_A L-fuconate dehydratase; 79.6 4 0.00014 43.7 8.0 106 98-234 239-348 (441)
184 1h5y_A HISF; histidine biosynt 79.4 1 3.6E-05 42.9 3.1 132 115-280 30-174 (253)
185 2x7v_A Probable endonuclease 4 79.3 18 0.0006 34.9 11.7 123 122-284 16-146 (287)
186 4e4f_A Mannonate dehydratase; 79.2 3.1 0.00011 44.8 7.0 106 98-234 225-333 (426)
187 1aop_A Sirhp, sulfite reductas 79.1 3.7 0.00013 44.9 7.7 56 641-697 81-167 (497)
188 2zds_A Putative DNA-binding pr 79.1 30 0.001 34.2 13.6 160 103-284 4-212 (340)
189 3uj2_A Enolase 1; enzyme funct 78.8 7.5 0.00026 42.6 9.9 104 116-246 290-399 (449)
190 1qop_A Tryptophan synthase alp 78.8 14 0.00046 37.1 11.1 101 108-234 22-150 (268)
191 1vyr_A Pentaerythritol tetrani 78.7 23 0.00079 37.3 13.3 210 90-312 8-271 (364)
192 3u9i_A Mandelate racemase/muco 78.6 18 0.0006 38.5 12.4 122 114-240 163-329 (393)
193 3dg3_A Muconate cycloisomerase 78.5 4.3 0.00015 42.5 7.7 112 98-241 182-296 (367)
194 2akj_A Ferredoxin--nitrite red 78.5 2.7 9.2E-05 47.6 6.5 70 627-697 206-295 (608)
195 3b0g_A NII3, nitrite reductase 78.4 2.3 8E-05 47.9 6.0 70 627-697 189-278 (591)
196 3u0h_A Xylose isomerase domain 78.3 4.3 0.00015 39.0 7.0 155 104-284 6-181 (281)
197 3tji_A Mandelate racemase/muco 78.1 4.1 0.00014 43.8 7.5 107 98-235 219-328 (422)
198 3tcs_A Racemase, putative; PSI 77.9 4.3 0.00015 43.1 7.6 115 98-243 196-313 (388)
199 4g38_A SIR-HP, sirhp, sulfite 77.6 2.9 0.0001 46.9 6.4 71 627-698 134-241 (570)
200 3lab_A Putative KDPG (2-keto-3 77.5 11 0.00038 37.8 9.9 110 115-279 22-138 (217)
201 1rvk_A Isomerase/lactonizing e 77.4 8.2 0.00028 40.2 9.4 69 114-185 147-226 (382)
202 3eez_A Putative mandelate race 77.4 6.6 0.00022 41.4 8.7 85 98-185 127-215 (378)
203 3usb_A Inosine-5'-monophosphat 77.3 11 0.00038 41.6 10.8 98 120-234 257-362 (511)
204 3ayv_A Putative uncharacterize 77.3 13 0.00044 35.5 10.0 127 122-281 14-161 (254)
205 3sbf_A Mandelate racemase / mu 77.2 3.2 0.00011 44.1 6.3 108 98-236 198-308 (401)
206 3t6c_A RSPA, putative MAND fam 77.1 5.1 0.00017 43.4 7.9 106 98-234 237-345 (440)
207 4fo4_A Inosine 5'-monophosphat 77.0 10 0.00036 40.3 10.2 67 120-192 109-183 (366)
208 3toy_A Mandelate racemase/muco 76.9 7.1 0.00024 41.3 8.8 107 98-235 210-319 (383)
209 4af0_A Inosine-5'-monophosphat 76.7 2.6 8.7E-05 47.7 5.5 67 119-187 331-412 (556)
210 2yr1_A 3-dehydroquinate dehydr 76.5 6.3 0.00022 39.9 7.9 52 114-166 152-205 (257)
211 3rcy_A Mandelate racemase/muco 76.5 8.2 0.00028 41.7 9.3 69 115-186 145-230 (433)
212 2nx9_A Oxaloacetate decarboxyl 76.2 73 0.0025 35.0 16.7 136 122-299 34-199 (464)
213 4avf_A Inosine-5'-monophosphat 76.2 7.6 0.00026 42.6 9.0 100 119-234 229-335 (490)
214 2oz8_A MLL7089 protein; struct 76.0 8.3 0.00028 40.6 9.0 67 115-184 144-215 (389)
215 3ik4_A Mandelate racemase/muco 75.7 12 0.00042 39.1 10.1 97 116-240 199-299 (365)
216 1qtw_A Endonuclease IV; DNA re 75.6 17 0.0006 34.8 10.5 136 121-283 15-180 (285)
217 2poz_A Putative dehydratase; o 75.3 12 0.0004 39.4 9.9 87 98-187 116-227 (392)
218 3ugv_A Enolase; enzyme functio 75.2 3.9 0.00013 43.4 6.3 106 98-234 216-324 (390)
219 1sfl_A 3-dehydroquinate dehydr 75.2 46 0.0016 33.1 13.7 174 116-326 15-202 (238)
220 2pgw_A Muconate cycloisomerase 75.0 10 0.00034 39.7 9.2 85 98-186 129-217 (384)
221 2pge_A MENC; OSBS, NYSGXRC, PS 74.9 51 0.0017 34.4 14.6 159 115-299 161-336 (377)
222 3rmj_A 2-isopropylmalate synth 74.9 51 0.0017 35.1 14.7 156 115-299 31-198 (370)
223 2zc8_A N-acylamino acid racema 74.8 3.5 0.00012 42.8 5.7 96 117-241 195-293 (369)
224 3v5c_A Mandelate racemase/muco 74.7 4.4 0.00015 43.1 6.5 97 118-239 215-313 (392)
225 4af0_A Inosine-5'-monophosphat 74.5 7.4 0.00025 44.0 8.5 95 118-234 280-387 (556)
226 2qgy_A Enolase from the enviro 74.5 11 0.00039 39.5 9.6 70 114-186 147-221 (391)
227 1thf_D HISF protein; thermophI 74.4 4 0.00014 39.6 5.6 154 120-309 32-198 (253)
228 2ptz_A Enolase; lyase, glycoly 74.3 11 0.00036 40.9 9.4 92 125-243 283-379 (432)
229 3aam_A Endonuclease IV, endoiv 74.0 14 0.00047 35.6 9.4 97 121-236 17-138 (270)
230 3ajx_A 3-hexulose-6-phosphate 73.9 8.5 0.00029 36.2 7.7 96 111-238 6-108 (207)
231 2ps2_A Putative mandelate race 73.8 6.8 0.00023 40.8 7.6 68 115-185 145-217 (371)
232 1geq_A Tryptophan synthase alp 73.7 27 0.00091 33.8 11.3 108 103-242 5-144 (248)
233 2qq6_A Mandelate racemase/muco 73.6 10 0.00034 40.2 8.9 68 116-186 149-237 (410)
234 4e8g_A Enolase, mandelate race 73.5 5.9 0.0002 42.1 7.2 62 159-242 256-320 (391)
235 1rpx_A Protein (ribulose-phosp 73.4 11 0.00039 36.2 8.6 108 105-243 13-130 (230)
236 3r4e_A Mandelate racemase/muco 73.3 7.2 0.00024 41.8 7.8 70 114-186 141-247 (418)
237 2v5j_A 2,4-dihydroxyhept-2-ENE 73.2 8.7 0.0003 39.5 8.1 141 123-301 103-276 (287)
238 4h3d_A 3-dehydroquinate dehydr 73.1 9.8 0.00033 38.5 8.3 55 112-166 150-206 (258)
239 1zj8_A Probable ferredoxin-dep 73.0 6.8 0.00023 43.8 7.8 54 641-697 178-241 (566)
240 2ekc_A AQ_1548, tryptophan syn 72.9 30 0.001 34.6 11.8 90 115-234 28-150 (262)
241 3rr1_A GALD, putative D-galact 72.8 10 0.00036 40.4 8.9 68 114-185 123-204 (405)
242 1xfc_A Alanine racemase; alpha 72.6 11 0.00039 39.2 9.0 139 126-312 56-211 (384)
243 2vd8_A Alanine racemase; pyrid 72.5 8.4 0.00029 40.4 7.9 139 126-312 57-209 (391)
244 2ocz_A 3-dehydroquinate dehydr 72.4 6.5 0.00022 39.2 6.7 49 118-166 128-178 (231)
245 3ijl_A Muconate cycloisomerase 72.4 5.6 0.00019 41.3 6.5 103 110-240 180-283 (338)
246 2akz_A Gamma enolase, neural; 72.3 15 0.0005 40.0 10.0 99 116-243 271-375 (439)
247 3qn3_A Enolase; structural gen 72.2 15 0.00051 39.8 10.0 105 116-247 262-372 (417)
248 2pp0_A L-talarate/galactarate 71.9 14 0.00048 39.0 9.5 85 98-186 155-247 (398)
249 2ovl_A Putative racemase; stru 71.8 14 0.00048 38.4 9.4 69 115-186 145-218 (371)
250 3stp_A Galactonate dehydratase 71.7 10 0.00035 40.6 8.5 69 115-186 178-257 (412)
251 3otr_A Enolase; structural gen 71.3 5.8 0.0002 43.8 6.6 106 116-247 282-392 (452)
252 3s5s_A Mandelate racemase/muco 71.2 16 0.00053 38.8 9.7 96 117-240 201-300 (389)
253 4h83_A Mandelate racemase/muco 71.0 11 0.00038 39.7 8.5 107 98-234 206-315 (388)
254 1w6t_A Enolase; bacterial infe 70.8 15 0.0005 39.8 9.5 100 115-241 279-384 (444)
255 3vcn_A Mannonate dehydratase; 70.8 7 0.00024 42.0 7.0 69 114-185 148-253 (425)
256 3v3w_A Starvation sensing prot 70.7 8.8 0.0003 41.2 7.8 69 114-185 147-252 (424)
257 1rqb_A Transcarboxylase 5S sub 70.6 1.2E+02 0.0042 34.0 17.1 137 121-299 50-216 (539)
258 2ox4_A Putative mandelate race 70.2 12 0.00043 39.2 8.7 70 115-187 145-237 (403)
259 2g0w_A LMO2234 protein; putati 70.1 25 0.00086 34.6 10.4 142 102-282 23-184 (296)
260 2qde_A Mandelate racemase/muco 70.1 9.9 0.00034 40.0 7.9 70 115-187 144-217 (397)
261 3fv9_G Mandelate racemase/muco 70.0 8.6 0.00029 40.7 7.4 71 145-242 232-305 (386)
262 1tkk_A Similar to chloromucona 70.0 13 0.00043 38.6 8.6 67 115-184 139-210 (366)
263 3dg3_A Muconate cycloisomerase 69.7 12 0.00041 39.1 8.3 68 115-185 138-211 (367)
264 3tj4_A Mandelate racemase; eno 69.6 1.1E+02 0.0038 31.9 16.0 69 115-186 150-224 (372)
265 2gdq_A YITF; mandelate racemas 69.6 17 0.00059 38.1 9.5 65 118-185 141-210 (382)
266 2pa6_A Enolase; glycolysis, ly 69.5 18 0.00063 38.6 9.9 96 116-240 268-369 (427)
267 3gr7_A NADPH dehydrogenase; fl 69.1 46 0.0016 34.7 12.6 207 89-311 7-248 (340)
268 2qdd_A Mandelate racemase/muco 68.9 15 0.0005 38.4 8.8 66 115-183 144-214 (378)
269 3na7_A HP0958; flagellar bioge 68.8 1.1 3.8E-05 45.0 0.3 17 639-655 219-235 (256)
270 2y88_A Phosphoribosyl isomeras 68.6 8.6 0.0003 37.0 6.5 125 120-281 33-170 (244)
271 1qo2_A Molecule: N-((5-phospho 68.5 5.3 0.00018 38.8 5.0 151 120-309 32-191 (241)
272 2o56_A Putative mandelate race 68.5 14 0.00048 38.8 8.6 69 116-187 152-243 (407)
273 2gl5_A Putative dehydratase pr 68.3 14 0.00049 38.8 8.6 69 116-187 150-246 (410)
274 4h2h_A Mandelate racemase/muco 68.0 16 0.00056 38.2 8.9 70 113-184 147-221 (376)
275 4a35_A Mitochondrial enolase s 67.9 18 0.0006 39.2 9.4 109 98-234 242-353 (441)
276 2p8b_A Mandelate racemase/muco 67.9 14 0.00047 38.3 8.3 69 116-187 141-214 (369)
277 3s5s_A Mandelate racemase/muco 67.8 82 0.0028 33.3 14.3 138 113-275 141-293 (389)
278 3i4k_A Muconate lactonizing en 67.7 13 0.00045 39.1 8.2 67 115-184 147-219 (383)
279 2og9_A Mandelate racemase/muco 67.5 23 0.00078 37.3 10.0 69 116-187 162-235 (393)
280 3p3b_A Mandelate racemase/muco 66.4 18 0.00062 38.1 9.0 67 118-187 150-229 (392)
281 3e02_A Uncharacterized protein 66.4 24 0.00082 37.0 9.7 225 116-365 30-289 (311)
282 3q45_A Mandelate racemase/muco 66.2 14 0.00047 38.7 8.0 68 115-185 139-210 (368)
283 1jcn_A Inosine monophosphate d 66.2 25 0.00087 38.3 10.3 62 120-187 256-323 (514)
284 3ozy_A Putative mandelate race 66.2 12 0.00042 39.5 7.6 69 114-185 149-221 (389)
285 3sbf_A Mandelate racemase / mu 66.2 11 0.00038 40.0 7.3 69 114-185 131-227 (401)
286 1nu5_A Chloromuconate cycloiso 66.1 13 0.00045 38.5 7.7 68 115-185 141-214 (370)
287 2r14_A Morphinone reductase; H 66.0 58 0.002 34.5 12.7 212 89-311 13-274 (377)
288 3tji_A Mandelate racemase/muco 66.0 12 0.00041 40.2 7.6 85 98-185 136-248 (422)
289 2al1_A Enolase 1, 2-phospho-D- 65.7 22 0.00076 38.6 9.6 99 116-243 274-378 (436)
290 1yx1_A Hypothetical protein PA 65.7 3.6 0.00012 39.9 3.2 96 122-242 27-135 (264)
291 2chr_A Chloromuconate cycloiso 65.5 10 0.00035 39.3 6.7 112 98-240 185-299 (370)
292 4hnl_A Mandelate racemase/muco 65.4 15 0.0005 39.2 8.1 85 98-185 135-247 (421)
293 3jr2_A Hexulose-6-phosphate sy 65.3 20 0.00068 34.6 8.4 94 112-234 13-112 (218)
294 3l9c_A 3-dehydroquinate dehydr 65.2 13 0.00044 38.0 7.2 48 119-166 160-209 (259)
295 1tzz_A Hypothetical protein L1 65.2 22 0.00074 37.4 9.2 69 115-186 164-237 (392)
296 3ffs_A Inosine-5-monophosphate 64.4 17 0.00057 39.3 8.3 62 121-188 146-212 (400)
297 3k2g_A Resiniferatoxin-binding 64.4 1.4E+02 0.0049 31.4 15.3 196 108-350 76-306 (364)
298 3aal_A Probable endonuclease 4 64.3 45 0.0015 32.9 10.9 123 122-284 22-151 (303)
299 1mdl_A Mandelate racemase; iso 64.0 16 0.00055 37.7 7.9 68 115-185 143-215 (359)
300 2zbt_A Pyridoxal biosynthesis 63.8 12 0.00042 37.6 6.8 62 121-188 90-152 (297)
301 1vfs_A Alanine racemase; TIM-b 63.5 18 0.00063 37.7 8.3 104 126-272 52-157 (386)
302 4e8g_A Enolase, mandelate race 63.5 18 0.00061 38.4 8.3 85 98-185 146-236 (391)
303 3gk0_A PNP synthase, pyridoxin 63.4 11 0.00038 39.3 6.4 80 144-241 140-220 (278)
304 3fv9_G Mandelate racemase/muco 63.4 15 0.0005 38.9 7.6 66 114-182 143-217 (386)
305 2pge_A MENC; OSBS, NYSGXRC, PS 62.9 13 0.00044 39.0 7.0 68 145-239 248-320 (377)
306 2o7s_A DHQ-SDH PR, bifunctiona 62.6 19 0.00066 39.4 8.6 48 114-166 130-179 (523)
307 4hnl_A Mandelate racemase/muco 62.6 12 0.00042 39.7 6.9 95 116-238 233-330 (421)
308 3t6c_A RSPA, putative MAND fam 62.4 19 0.00065 38.9 8.4 83 98-185 137-266 (440)
309 2qgq_A Protein TM_1862; alpha- 62.2 1.3E+02 0.0043 30.4 13.9 134 114-299 32-183 (304)
310 2nql_A AGR_PAT_674P, isomerase 62.0 22 0.00076 37.2 8.6 69 115-186 163-235 (388)
311 2zc8_A N-acylamino acid racema 61.9 1.5E+02 0.0051 30.6 14.8 65 116-185 141-207 (369)
312 3iix_A Biotin synthetase, puta 61.8 1.4E+02 0.0047 30.1 14.6 138 115-278 84-226 (348)
313 3can_A Pyruvate-formate lyase- 61.8 95 0.0033 28.3 12.1 89 221-355 22-113 (182)
314 3ugv_A Enolase; enzyme functio 61.4 33 0.0011 36.3 9.8 68 115-185 170-245 (390)
315 3toy_A Mandelate racemase/muco 61.1 32 0.0011 36.3 9.6 68 115-185 166-239 (383)
316 2qgh_A Diaminopimelate decarbo 60.9 78 0.0027 33.4 12.6 57 220-281 184-242 (425)
317 1izc_A Macrophomate synthase i 60.8 45 0.0015 35.2 10.6 59 216-299 232-290 (339)
318 3ro6_B Putative chloromuconate 59.9 17 0.00059 37.7 7.3 67 115-184 139-209 (356)
319 4e4u_A Mandalate racemase/muco 59.1 26 0.00089 37.4 8.6 68 115-185 143-227 (412)
320 3khj_A Inosine-5-monophosphate 58.9 16 0.00055 38.7 6.9 66 120-187 155-235 (361)
321 1vc4_A Indole-3-glycerol phosp 58.7 31 0.0011 34.6 8.7 91 119-238 66-161 (254)
322 4fo4_A Inosine 5'-monophosphat 58.5 16 0.00054 39.0 6.8 66 120-187 159-239 (366)
323 3i6e_A Muconate cycloisomerase 58.4 21 0.00072 37.6 7.7 66 115-184 147-217 (385)
324 3ovg_A Amidohydrolase; structu 58.3 76 0.0026 33.6 11.9 192 113-350 44-276 (363)
325 1o66_A 3-methyl-2-oxobutanoate 58.2 66 0.0022 33.4 11.1 143 125-309 31-199 (275)
326 1wv2_A Thiazole moeity, thiazo 58.2 38 0.0013 35.1 9.2 92 99-191 101-219 (265)
327 1y0e_A Putative N-acetylmannos 58.2 23 0.00077 33.7 7.2 62 121-187 129-203 (223)
328 1wa3_A 2-keto-3-deoxy-6-phosph 57.4 14 0.00049 34.7 5.7 62 121-192 73-135 (205)
329 2qjg_A Putative aldolase MJ040 57.0 35 0.0012 33.6 8.6 137 121-299 48-200 (273)
330 3hgj_A Chromate reductase; TIM 56.9 50 0.0017 34.4 10.1 93 98-196 216-326 (349)
331 4adt_A Pyridoxine biosynthetic 56.7 19 0.00064 37.5 6.8 62 121-188 90-152 (297)
332 1v77_A PH1877P, hypothetical p 56.4 8.3 0.00028 37.5 3.9 69 222-299 115-184 (212)
333 3c8f_A Pyruvate formate-lyase 56.4 43 0.0015 31.2 8.7 49 219-287 86-136 (245)
334 2vws_A YFAU, 2-keto-3-deoxy su 56.4 32 0.0011 34.7 8.3 141 122-300 81-254 (267)
335 3tdn_A FLR symmetric alpha-bet 56.3 15 0.00051 35.8 5.8 65 120-189 37-109 (247)
336 3bg3_A Pyruvate carboxylase, m 56.3 97 0.0033 36.0 13.2 153 115-299 122-302 (718)
337 4h1z_A Enolase Q92ZS5; dehydra 56.3 16 0.00055 38.9 6.4 113 98-242 229-344 (412)
338 2ftp_A Hydroxymethylglutaryl-C 56.1 36 0.0012 34.7 8.7 69 114-187 155-234 (302)
339 2htm_A Thiazole biosynthesis p 55.9 30 0.001 35.9 8.1 83 110-192 103-211 (268)
340 3dgb_A Muconate cycloisomerase 55.9 29 0.00098 36.6 8.2 67 115-184 147-219 (382)
341 3cyj_A Mandelate racemase/muco 55.6 45 0.0016 34.7 9.6 69 114-185 142-214 (372)
342 3qld_A Mandelate racemase/muco 55.6 48 0.0016 35.1 9.8 117 116-238 149-298 (388)
343 3ctl_A D-allulose-6-phosphate 55.6 20 0.00068 35.7 6.5 150 101-298 57-218 (231)
344 4dwd_A Mandelate racemase/muco 55.5 37 0.0013 36.0 9.0 68 115-185 138-217 (393)
345 1m3u_A 3-methyl-2-oxobutanoate 55.3 1.2E+02 0.004 31.3 12.3 150 127-324 33-212 (264)
346 2hzg_A Mandelate racemase/muco 55.1 18 0.00061 38.2 6.5 68 115-185 144-221 (401)
347 1ka9_F Imidazole glycerol phos 54.9 27 0.00093 33.7 7.3 153 118-309 31-199 (252)
348 1rpx_A Protein (ribulose-phosp 54.9 73 0.0025 30.5 10.3 75 102-190 69-152 (230)
349 1wuf_A Hypothetical protein LI 54.8 27 0.00094 36.7 7.8 57 159-237 250-309 (393)
350 2ozt_A TLR1174 protein; struct 54.6 44 0.0015 34.4 9.2 94 116-239 173-273 (332)
351 3my9_A Muconate cycloisomerase 54.3 19 0.00067 37.6 6.6 67 115-184 145-216 (377)
352 1a0c_A Xylose isomerase; ketol 54.1 1.6E+02 0.0053 32.0 13.7 131 125-283 87-234 (438)
353 3r0u_A Enzyme of enolase super 54.1 44 0.0015 35.3 9.3 68 114-184 140-211 (379)
354 1sjd_A N-acylamino acid racema 53.9 27 0.00092 36.1 7.5 68 115-186 140-209 (368)
355 1eep_A Inosine 5'-monophosphat 53.6 41 0.0014 35.5 8.9 62 120-187 154-221 (404)
356 1m5w_A Pyridoxal phosphate bio 53.4 16 0.00055 37.5 5.5 81 143-241 111-192 (243)
357 3mkc_A Racemase; metabolic pro 53.2 39 0.0013 35.8 8.7 65 119-186 160-233 (394)
358 3r2g_A Inosine 5'-monophosphat 52.6 42 0.0014 35.8 8.8 65 118-187 99-168 (361)
359 2nva_A Arginine decarboxylase, 52.2 45 0.0015 34.4 8.8 151 122-312 54-214 (372)
360 3dxi_A Putative aldolase; TIM 52.1 88 0.003 32.7 11.0 101 114-240 20-136 (320)
361 1dbt_A Orotidine 5'-phosphate 51.9 55 0.0019 32.2 9.0 137 112-281 10-163 (239)
362 3bjs_A Mandelate racemase/muco 51.8 35 0.0012 36.5 8.2 68 116-186 184-256 (428)
363 1icp_A OPR1, 12-oxophytodienoa 51.3 31 0.0011 36.5 7.6 210 90-311 19-275 (376)
364 3cyj_A Mandelate racemase/muco 51.3 51 0.0018 34.3 9.1 55 162-238 243-298 (372)
365 3ayv_A Putative uncharacterize 51.1 83 0.0029 29.8 9.9 91 135-243 3-100 (254)
366 4e38_A Keto-hydroxyglutarate-a 50.7 21 0.00073 35.9 5.9 63 120-192 95-158 (232)
367 2xhf_A Peroxiredoxin 5; oxidor 50.7 41 0.0014 31.9 7.6 54 110-169 55-111 (171)
368 3mqt_A Mandelate racemase/muco 50.4 36 0.0012 36.0 7.9 64 119-185 155-227 (394)
369 2yzr_A Pyridoxal biosynthesis 50.4 52 0.0018 35.1 9.0 160 121-299 86-293 (330)
370 3ik4_A Mandelate racemase/muco 50.1 52 0.0018 34.3 9.0 68 114-185 141-215 (365)
371 3ru6_A Orotidine 5'-phosphate 50.1 82 0.0028 32.9 10.4 136 112-280 31-178 (303)
372 1thf_D HISF protein; thermophI 49.8 33 0.0011 33.2 6.9 90 120-236 153-250 (253)
373 2qiw_A PEP phosphonomutase; st 49.8 96 0.0033 31.4 10.6 152 127-310 36-208 (255)
374 3kru_A NADH:flavin oxidoreduct 49.6 2.5E+02 0.0085 29.4 14.8 208 90-311 7-248 (343)
375 1tz9_A Mannonate dehydratase; 49.6 57 0.002 33.5 9.1 70 209-286 189-259 (367)
376 4e5t_A Mandelate racemase / mu 49.5 38 0.0013 35.9 8.0 69 114-185 149-234 (404)
377 2qf7_A Pyruvate carboxylase pr 49.2 2.8E+02 0.0095 33.8 16.1 159 117-311 572-757 (1165)
378 1oy0_A Ketopantoate hydroxymet 49.1 1.2E+02 0.0041 31.5 11.3 159 125-324 48-230 (281)
379 1h1y_A D-ribulose-5-phosphate 49.0 80 0.0027 30.5 9.6 111 101-243 5-125 (228)
380 2hxt_A L-fuconate dehydratase; 48.7 49 0.0017 35.4 8.7 68 115-185 197-268 (441)
381 3tr2_A Orotidine 5'-phosphate 48.6 61 0.0021 32.5 8.8 101 153-280 53-164 (239)
382 2e28_A Pyruvate kinase, PK; al 48.6 24 0.00081 40.1 6.5 210 118-363 173-393 (587)
383 1wue_A Mandelate racemase/muco 48.5 24 0.00081 37.1 6.1 57 159-237 250-309 (386)
384 1chr_A Chloromuconate cycloiso 48.2 51 0.0017 34.3 8.5 67 115-184 141-213 (370)
385 2q5c_A NTRC family transcripti 48.1 1.9E+02 0.0066 27.6 12.0 126 115-267 36-181 (196)
386 4h1z_A Enolase Q92ZS5; dehydra 47.7 76 0.0026 33.7 9.9 86 98-186 169-259 (412)
387 1yxy_A Putative N-acetylmannos 47.7 72 0.0024 30.6 8.9 67 120-191 90-168 (234)
388 1dxe_A 2-dehydro-3-deoxy-galac 47.3 56 0.0019 32.5 8.4 138 124-299 84-253 (256)
389 3sjn_A Mandelate racemase/muco 47.2 37 0.0013 35.6 7.3 67 116-185 146-220 (374)
390 3ijd_A Uncharacterized protein 46.8 30 0.001 36.3 6.5 114 120-246 167-287 (315)
391 1q6o_A Humps, 3-keto-L-gulonat 46.6 51 0.0017 31.6 7.6 97 108-234 6-109 (216)
392 1wv2_A Thiazole moeity, thiazo 46.5 2E+02 0.0068 29.9 12.3 146 109-297 77-236 (265)
393 1e0t_A Pyruvate kinase, PK; ph 46.3 25 0.00086 38.9 6.1 156 118-302 172-337 (470)
394 1r0m_A N-acylamino acid racema 45.8 35 0.0012 35.4 6.8 66 115-185 147-214 (375)
395 1zfj_A Inosine monophosphate d 45.4 1.2E+02 0.0043 32.4 11.3 101 118-234 232-339 (491)
396 3icg_A Endoglucanase D; cellul 45.1 2.7E+02 0.0094 30.1 14.0 51 120-172 47-110 (515)
397 1ypf_A GMP reductase; GUAC, pu 45.1 2.7E+02 0.0092 28.7 13.3 78 102-193 95-180 (336)
398 1toa_A Tromp-1, protein (perip 44.5 8.3 0.00028 39.9 1.9 140 98-252 55-215 (313)
399 1ep3_A Dihydroorotate dehydrog 44.5 57 0.002 32.4 7.9 78 101-187 98-195 (311)
400 3qja_A IGPS, indole-3-glycerol 44.2 1.8E+02 0.0061 29.5 11.6 86 121-234 75-165 (272)
401 4gfi_A Mandelate racemase/muco 44.2 41 0.0014 34.4 7.0 123 113-241 129-279 (329)
402 3v5c_A Mandelate racemase/muco 44.2 51 0.0017 35.0 7.9 67 116-185 148-227 (392)
403 3fcp_A L-Ala-D/L-Glu epimerase 44.1 41 0.0014 35.3 7.1 67 115-184 146-218 (381)
404 3b0p_A TRNA-dihydrouridine syn 44.0 81 0.0028 32.9 9.3 90 102-196 127-233 (350)
405 3ldv_A Orotidine 5'-phosphate 43.8 74 0.0025 32.3 8.7 138 113-280 35-182 (255)
406 1z41_A YQJM, probable NADH-dep 43.8 1.5E+02 0.005 30.6 11.1 144 173-343 148-305 (338)
407 2p3e_A Diaminopimelate decarbo 43.5 90 0.0031 32.6 9.6 22 125-149 74-95 (420)
408 1ydn_A Hydroxymethylglutaryl-C 43.4 77 0.0026 31.9 8.7 74 115-193 152-236 (295)
409 4avf_A Inosine-5'-monophosphat 43.3 37 0.0013 37.2 6.8 68 119-188 279-361 (490)
410 4h83_A Mandelate racemase/muco 42.9 40 0.0014 35.5 6.8 67 116-185 164-235 (388)
411 1xvl_A Mn transporter, MNTC pr 42.5 10 0.00035 39.4 2.2 139 97-252 61-222 (321)
412 1h5y_A HISF; histidine biosynt 42.4 44 0.0015 31.6 6.5 90 120-236 156-253 (253)
413 3e49_A Uncharacterized protein 42.3 1E+02 0.0035 32.3 9.7 205 116-345 30-265 (311)
414 3s1x_A Probable transaldolase; 42.3 75 0.0026 32.0 8.3 69 103-181 56-124 (223)
415 3qja_A IGPS, indole-3-glycerol 42.2 2.9E+02 0.0099 28.0 12.9 128 121-293 125-258 (272)
416 3go2_A Putative L-alanine-DL-g 42.2 1.1E+02 0.0038 32.4 10.1 69 114-185 141-239 (409)
417 2ozt_A TLR1174 protein; struct 42.2 40 0.0014 34.7 6.5 67 116-185 116-187 (332)
418 3lab_A Putative KDPG (2-keto-3 42.1 54 0.0019 32.8 7.2 63 120-192 74-143 (217)
419 4dye_A Isomerase; enolase fami 42.0 3.4E+02 0.012 28.7 17.8 155 116-299 168-336 (398)
420 1s2w_A Phosphoenolpyruvate pho 41.9 56 0.0019 33.8 7.6 59 102-166 152-214 (295)
421 4ecl_A Serine racemase, vantg; 41.8 30 0.001 36.4 5.7 47 125-180 51-97 (374)
422 2c6q_A GMP reductase 2; TIM ba 41.5 1.4E+02 0.0048 31.3 10.7 100 120-236 119-228 (351)
423 4a3q_A Alanine racemase 1; iso 41.5 65 0.0022 34.2 8.2 103 125-272 52-157 (382)
424 3va8_A Probable dehydratase; e 41.3 51 0.0017 35.8 7.5 69 144-239 272-343 (445)
425 1mzh_A Deoxyribose-phosphate a 41.2 57 0.0019 31.9 7.2 77 103-183 117-199 (225)
426 2nx9_A Oxaloacetate decarboxyl 41.1 54 0.0018 36.1 7.7 77 108-189 148-236 (464)
427 3vdg_A Probable glucarate dehy 41.0 54 0.0018 35.6 7.6 69 144-239 274-345 (445)
428 4e4f_A Mannonate dehydratase; 40.9 56 0.0019 35.1 7.6 84 98-186 131-255 (426)
429 3f4w_A Putative hexulose 6 pho 40.8 2.3E+02 0.0078 26.4 12.2 63 123-191 69-137 (211)
430 3bo9_A Putative nitroalkan dio 40.6 2.2E+02 0.0076 29.2 11.8 79 102-194 78-157 (326)
431 2tps_A Protein (thiamin phosph 40.4 77 0.0026 29.9 7.8 61 120-187 33-100 (227)
432 3ffs_A Inosine-5-monophosphate 40.3 44 0.0015 36.1 6.8 67 119-187 193-274 (400)
433 3o74_A Fructose transport syst 40.3 62 0.0021 30.3 7.1 142 116-279 43-211 (272)
434 2egz_A 3-dehydroquinate dehydr 40.2 55 0.0019 32.2 6.9 47 114-166 121-169 (219)
435 2dy3_A Alanine racemase; alpha 40.1 39 0.0013 34.7 6.1 70 231-312 116-197 (361)
436 3tsm_A IGPS, indole-3-glycerol 40.1 1.4E+02 0.0049 30.5 10.2 86 121-234 82-172 (272)
437 3kw3_A Alanine racemase; niaid 40.1 64 0.0022 34.2 7.9 105 124-271 63-170 (376)
438 3lot_A Uncharacterized protein 40.1 1.2E+02 0.0041 31.9 9.7 206 115-345 29-268 (314)
439 2w6r_A Imidazole glycerol phos 39.9 68 0.0023 31.2 7.5 68 120-192 32-107 (266)
440 3ddm_A Putative mandelate race 39.8 34 0.0012 36.3 5.7 66 117-185 156-225 (392)
441 3hgj_A Chromate reductase; TIM 39.3 70 0.0024 33.3 7.9 213 90-312 7-259 (349)
442 2p3z_A L-rhamnonate dehydratas 39.3 50 0.0017 35.4 7.0 67 145-236 262-330 (415)
443 4fxs_A Inosine-5'-monophosphat 39.2 40 0.0014 37.0 6.3 65 120-187 282-362 (496)
444 1twi_A Diaminopimelate decarbo 39.2 1.8E+02 0.0061 30.6 11.0 57 220-281 189-247 (434)
445 4h2h_A Mandelate racemase/muco 39.1 27 0.00091 36.6 4.7 62 159-242 242-306 (376)
446 3vni_A Xylose isomerase domain 39.0 2E+02 0.0069 27.6 10.7 103 177-306 25-147 (294)
447 2okt_A OSB synthetase, O-succi 38.6 44 0.0015 34.5 6.2 60 158-239 211-273 (342)
448 2opj_A O-succinylbenzoate-COA 37.7 47 0.0016 34.4 6.2 90 117-239 137-229 (327)
449 1vyr_A Pentaerythritol tetrani 37.4 87 0.003 32.9 8.3 76 116-196 249-331 (364)
450 3ekg_A Mandelate racemase/muco 37.4 1.3E+02 0.0045 32.3 9.8 95 116-236 222-319 (404)
451 2hjp_A Phosphonopyruvate hydro 37.4 70 0.0024 33.1 7.4 61 102-168 148-212 (290)
452 3vc5_A Mandelate racemase/muco 37.3 63 0.0021 35.0 7.4 68 145-239 270-340 (441)
453 1vrd_A Inosine-5'-monophosphat 37.3 1.8E+02 0.0063 31.2 11.0 65 119-188 237-306 (494)
454 2qjg_A Putative aldolase MJ040 37.3 1.4E+02 0.0047 29.3 9.3 137 120-299 101-259 (273)
455 4a35_A Mitochondrial enolase s 36.9 87 0.003 33.8 8.4 68 115-185 200-271 (441)
456 1vrd_A Inosine-5'-monophosphat 36.8 62 0.0021 34.9 7.3 66 120-187 288-368 (494)
457 1bd0_A Alanine racemase; isome 36.4 1.3E+02 0.0044 31.5 9.4 101 126-272 53-155 (388)
458 3o07_A Pyridoxine biosynthesis 36.3 1.3E+02 0.0046 31.5 9.3 112 119-243 123-277 (291)
459 2yyu_A Orotidine 5'-phosphate 36.1 2.5E+02 0.0086 27.6 11.0 142 108-281 7-164 (246)
460 1ka9_F Imidazole glycerol phos 35.7 80 0.0027 30.4 7.2 90 120-236 154-251 (252)
461 3tkf_A Transaldolase; structur 35.6 1.1E+02 0.0038 32.6 8.8 76 213-299 97-176 (345)
462 1l8d_A DNA double-strand break 35.5 18 0.00062 31.5 2.4 11 644-654 49-59 (112)
463 3fxg_A Rhamnonate dehydratase; 35.4 73 0.0025 35.0 7.5 91 118-236 230-324 (455)
464 1me8_A Inosine-5'-monophosphat 35.2 34 0.0012 37.4 5.0 66 120-185 294-378 (503)
465 3gwq_A D-serine deaminase; str 35.1 2.2E+02 0.0076 30.3 11.1 104 125-272 88-198 (426)
466 1f3t_A ODC, ornithine decarbox 35.0 1.3E+02 0.0045 31.8 9.3 109 122-274 75-189 (425)
467 3tr9_A Dihydropteroate synthas 34.9 4.2E+02 0.014 27.9 12.9 155 101-298 105-288 (314)
468 1r3s_A URO-D, uroporphyrinogen 34.9 1.7E+02 0.0058 30.3 10.0 141 118-299 197-363 (367)
469 2gjl_A Hypothetical protein PA 34.7 2.9E+02 0.0098 28.0 11.5 75 102-188 68-145 (328)
470 2w6r_A Imidazole glycerol phos 34.5 1.1E+02 0.0037 29.8 8.0 95 121-245 159-261 (266)
471 3qll_A Citrate lyase; beta bar 34.5 73 0.0025 33.1 7.1 152 116-294 112-269 (316)
472 3usb_A Inosine-5'-monophosphat 34.4 58 0.002 35.9 6.6 66 120-187 307-387 (511)
473 2jbm_A Nicotinate-nucleotide p 34.3 49 0.0017 34.2 5.7 62 121-185 207-269 (299)
474 3ovp_A Ribulose-phosphate 3-ep 34.2 1.4E+02 0.0048 29.4 8.8 147 100-298 63-218 (228)
475 1vqt_A Orotidine 5'-phosphate 34.0 11 0.00038 37.0 0.8 124 108-280 12-144 (213)
476 2a5h_A L-lysine 2,3-aminomutas 34.0 73 0.0025 34.0 7.2 22 219-240 180-203 (416)
477 4hpn_A Putative uncharacterize 33.9 1.2E+02 0.004 31.5 8.5 70 114-186 142-215 (378)
478 3t05_A Pyruvate kinase, PK; te 33.8 56 0.0019 37.3 6.5 158 118-303 193-358 (606)
479 3eoo_A Methylisocitrate lyase; 33.8 36 0.0012 35.5 4.6 59 103-168 155-214 (298)
480 3l5l_A Xenobiotic reductase A; 33.6 83 0.0028 33.0 7.4 93 98-195 222-332 (363)
481 2fn9_A Ribose ABC transporter, 33.5 2.1E+02 0.0071 27.1 9.6 137 116-279 43-220 (290)
482 1jcn_A Inosine monophosphate d 33.2 66 0.0023 35.0 6.8 71 119-194 305-393 (514)
483 1h7n_A 5-aminolaevulinic acid 33.1 22 0.00075 38.1 2.9 49 115-166 152-206 (342)
484 3ijl_A Muconate cycloisomerase 32.9 46 0.0016 34.4 5.3 103 115-244 133-238 (338)
485 3ujp_A Mn transporter subunit; 32.8 30 0.001 35.8 3.8 140 98-252 48-208 (307)
486 3gr7_A NADPH dehydrogenase; fl 32.8 89 0.003 32.6 7.4 77 115-196 226-315 (340)
487 3out_A Glutamate racemase; str 32.8 43 0.0015 33.9 4.9 43 118-166 56-99 (268)
488 1lt8_A Betaine-homocysteine me 32.8 1.1E+02 0.0037 33.1 8.3 47 120-171 141-188 (406)
489 1eix_A Orotidine 5'-monophosph 32.8 1.1E+02 0.0037 30.3 7.7 141 109-281 18-170 (245)
490 1q7z_A 5-methyltetrahydrofolat 32.6 3.1E+02 0.011 30.8 12.2 144 118-295 126-285 (566)
491 3va8_A Probable dehydratase; e 32.5 1.7E+02 0.0059 31.7 9.8 154 115-299 190-359 (445)
492 1xcc_A 1-Cys peroxiredoxin; un 32.4 1.1E+02 0.0037 29.5 7.5 65 101-168 31-103 (220)
493 4b3l_A Beta-glucosidase; hydro 32.3 78 0.0027 34.9 7.2 52 220-271 98-150 (479)
494 1xg4_A Probable methylisocitra 32.2 47 0.0016 34.5 5.1 60 102-168 150-210 (295)
495 2qul_A D-tagatose 3-epimerase; 32.2 2E+02 0.0068 27.5 9.3 56 219-281 48-109 (290)
496 3m47_A Orotidine 5'-phosphate 32.1 1.6E+02 0.0054 29.0 8.7 133 112-281 19-158 (228)
497 1tqj_A Ribulose-phosphate 3-ep 31.9 1.2E+02 0.0042 29.6 7.9 109 105-246 7-127 (230)
498 3vab_A Diaminopimelate decarbo 31.9 3.1E+02 0.01 29.4 11.6 51 219-275 199-252 (443)
499 3cqj_A L-ribulose-5-phosphate 31.8 1.4E+02 0.0047 29.0 8.2 81 219-306 67-162 (295)
500 1a3w_A Pyruvate kinase; allost 31.7 51 0.0017 36.8 5.6 160 118-309 193-363 (500)
No 1
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=100.00 E-value=4.2e-128 Score=1025.99 Aligned_cols=248 Identities=40% Similarity=0.633 Sum_probs=237.4
Q ss_pred ccCCCCceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcC
Q 005248 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYN 161 (706)
Q Consensus 82 ~~~Rr~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~ 161 (706)
++.||+||+|+||+|+|||+|||+|||||||+|.|+++|++||++|++|||||||||||++++|+||++|+++|++.|++
T Consensus 2 ~~~Rr~Tr~V~VG~v~IGG~~PI~VQSMtnT~T~Dv~aTv~QI~~L~~aG~eiVRvaVp~~~~A~al~~I~~~l~~~~~~ 81 (406)
T 4g9p_A 2 EGMRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVE 81 (406)
T ss_dssp CCCCCCCCCEEETTEEESTTSCCEEEEECCSCTTCHHHHHHHHHHHHHHTCSEEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCccCeeEEEcCEeeCCCCceeeeecCCCCcccHHHHHHHHHHHHHcCCCEEEEecCCHHHHHhHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeccCCCHHHHHHH----hhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 162 IPLVADIHFAPSVALRV----AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 162 iPLVADIHF~~~~Al~a----~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
+||||||||||++|+.| ++++|||||||||||+++++ +++|+++|++||++|+|||||
T Consensus 82 vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~~k~------------------~e~~~~vv~~ak~~~~pIRIG 143 (406)
T 4g9p_A 82 VPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGRHK------------------DEHFAEMIRIAMDLGKPVRIG 143 (406)
T ss_dssp CCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCSTHHH------------------HHHHHHHHHHHHHHTCCEEEE
T ss_pred CceEeeecccHHHHHHHHHHHHhHHhhcccCccccCccccH------------------HHHHHHHHHHHHHccCCceec
Confidence 99999999999999954 44699999999999987654 679999999999999999999
Q ss_pred cCCCCCchhHHHhhCC------C--------hHHHHHHHHHHHHHHHHCCC--CcEEEEEecCChhHHHHHHHHHHHhhh
Q 005248 238 TNHGSLSDRIMSYYGD------S--------PRGMVESAFEFARICRKLDF--HNFLFSMKASNPVVMVQAYRLLVAEMY 301 (706)
Q Consensus 238 vN~GSL~~~il~rygd------t--------~eamVeSAle~~~i~e~~~f--~~iviS~KaSnv~~~i~ayrlla~~~~ 301 (706)
||||||++++|++||| + +||||||||+|+++|+++|| +||+||||+|||++||+|||+|+++
T Consensus 144 VN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~~iviS~KaSdv~~~i~aYr~la~~-- 221 (406)
T 4g9p_A 144 ANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARR-- 221 (406)
T ss_dssp EEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEECSSHHHHHHHHHHHHHH--
T ss_pred cccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCChhheEEEeecCCHHHHHHHHHHHHHh--
Confidence 9999999999999975 2 38999999999999999888 7899999999999999999999999
Q ss_pred cCCCCCcccccccccCCCCCCchhhHHHHHHHhhcCCCceeEEecCCCCcc
Q 005248 302 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEK 352 (706)
Q Consensus 302 ~eg~~YPLHLGVTEAG~g~~G~IKSavGiG~LL~dGIGDTIRVSLT~dP~~ 352 (706)
+||||||||||||++.+|+||||+|||+||+||||||||||||+||++
T Consensus 222 ---~dyPLHLGvTEAG~~~~G~IKSaigiG~LL~~GIGDTIRVSLT~dP~e 269 (406)
T 4g9p_A 222 ---TQAPLHLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPSPKE 269 (406)
T ss_dssp ---CCSCBEECCTTCBSHHHHHHHHHHHHHHHHHTTCCSEEECCBCCCTTS
T ss_pred ---CCCCceeeeecCCCcccceechHHHHHHHHhccCchhEEeeccCCCCc
Confidence 899999999999999999999999999999999999999999998865
No 2
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=100.00 E-value=2.9e-127 Score=1007.29 Aligned_cols=323 Identities=41% Similarity=0.689 Sum_probs=310.2
Q ss_pred ccCCCCceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcC
Q 005248 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYN 161 (706)
Q Consensus 82 ~~~Rr~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~ 161 (706)
..+||+||+|+||+|+|||++||+|||||||+|.|+++|++||++|++|||||||+|||++++|+++++||++ ++
T Consensus 10 ~~~rr~tr~v~VG~v~IGG~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp~~~~a~al~~I~~~-----~~ 84 (366)
T 3noy_A 10 MIQKRKTRQIRVGNVKIGGDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPHKEDVEALEEIVKK-----SP 84 (366)
T ss_dssp CCCCCCCCCEEETTEEESTTSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHH-----CS
T ss_pred ceeeccceEEEECCEEEcCCCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHhc-----CC
Confidence 4679999999999999999999999999999999999999999999999999999999999999999999997 89
Q ss_pred cceeeccCCCHHHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 162 IPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 162 iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
+||||||||||++|++|+++ +||+||||||||+. ++|++||++||++|+||||||||
T Consensus 85 vPlvaDiHf~~~lal~a~e~G~dklRINPGNig~~----------------------~~~~~vv~~ak~~~~piRIGvN~ 142 (366)
T 3noy_A 85 MPVIADIHFAPSYAFLSMEKGVHGIRINPGNIGKE----------------------EIVREIVEEAKRRGVAVRIGVNS 142 (366)
T ss_dssp SCEEEECCSCHHHHHHHHHTTCSEEEECHHHHSCH----------------------HHHHHHHHHHHHHTCEEEEEEEG
T ss_pred CCEEEeCCCCHHHHHHHHHhCCCeEEECCcccCch----------------------hHHHHHHHHHHHcCCCEEEecCC
Confidence 99999999999999999998 99999999999973 37899999999999999999999
Q ss_pred CCCchhHHHhhC-CChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCcccccccccCCC
Q 005248 241 GSLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319 (706)
Q Consensus 241 GSL~~~il~ryg-dt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~g 319 (706)
|||++++++||| +||++||||||+++++||++||+||+||+|+|||++||+|||+|+++ +||||||||||||++
T Consensus 143 GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S~v~~~i~ayr~la~~-----~dyPLHlGvTEAG~~ 217 (366)
T 3noy_A 143 GSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKGSDVLQNVRANLIFAER-----TDVPLHIGITEAGMG 217 (366)
T ss_dssp GGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSHHHHHHHHHHHHHH-----CCCCEEECCSSCCSH
T ss_pred cCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecCChHHHHHHHHHHHhc-----cCCCEEEccCCCCCC
Confidence 999999999999 89999999999999999999999999999999999999999999999 999999999999999
Q ss_pred CCCchhhHHHHHHHhhcCCCceeEEecCCCCcccchHHHHHHHhhhhhhhccCCcchhhhcccchhhhhhccCCCCcccc
Q 005248 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKE 399 (706)
Q Consensus 320 ~~G~IKSavGiG~LL~dGIGDTIRVSLT~dP~~EV~va~~l~~~~~r~~~~~~~~~~~~~~~~~~~~~~rr~t~~~~~~~ 399 (706)
++|+||||+|||+||.||||||||||||+||++||++
T Consensus 218 ~~G~ikSsigiG~LL~dGIGDTIRVSLt~~p~~Ev~v------------------------------------------- 254 (366)
T 3noy_A 218 TKGIIKSSVGIGILLYMGIGDTVRVSLTDDPVVEVET------------------------------------------- 254 (366)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSEECCCCSSCHHHHHHH-------------------------------------------
T ss_pred cceeeehHHHHHHHHHhcccceEEEeCCCCcHHHHHH-------------------------------------------
Confidence 9999999999999999999999999999877554322
Q ss_pred CCccccccccccCCeeeeecccccccchhhHhhhhhhhhhhCCCCCCcCCcceEecCCCCCCCchhHHHHHHHHhhcccc
Q 005248 400 GEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMG 479 (706)
Q Consensus 400 g~~~~~~~v~~~~~~V~~~~~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~lk~~~~~~~~ 479 (706)
T Consensus 255 -------------------------------------------------------------------------------- 254 (366)
T 3noy_A 255 -------------------------------------------------------------------------------- 254 (366)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCCccchhhhhhhhhhhhcccccCCCCceEEEeecCCCCHHHHHhhhcCCCeEEEecCCCCCCCCCcHHHH
Q 005248 480 VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAA 559 (706)
Q Consensus 480 ~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~lk~~~~vVv~l~~~~~S~k~s~v~~~ 559 (706)
T Consensus 255 -------------------------------------------------------------------------------- 254 (366)
T 3noy_A 255 -------------------------------------------------------------------------------- 254 (366)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcCCCCCeEEeecccCCCCcccchhhhHHHHHHHhhhcCCceEEEeCCCCChhhHhHHHHHHHHHhhcccCC
Q 005248 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGCRMRNTK 639 (706)
Q Consensus 560 r~~~~~l~~~~~~~Pli~hlgvTEaG~~~~~~IkSa~~iG~LL~dGIGDtIrvslt~~p~~ev~~~a~~ILqa~rlR~~k 639 (706)
||+|||++|+|.+|
T Consensus 255 ------------------------------------------------------------------a~~ILqslglR~~g 268 (366)
T 3noy_A 255 ------------------------------------------------------------------AYEILKSLGLRRRG 268 (366)
T ss_dssp ------------------------------------------------------------------HHHHHHHTTSCCSS
T ss_pred ------------------------------------------------------------------HHHHHHhcCCCcCC
Confidence 33399999999999
Q ss_pred ceEeccCCCCcccccHHHHHHHHHHHhCCCC-CCeEEEEcccccCccccccCceeeeccCCCceEeeC
Q 005248 640 TEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLLW 706 (706)
Q Consensus 640 te~ISCPsCGRTlfDLq~~~a~Ik~~t~hLk-glkIAIMGCIVNGPGEmadAD~GyvG~~~gki~LY~ 706 (706)
+|||||||||||+||||+++++|+++|.|+| ++|||||||||||||||+||||||+|| +|++.||+
T Consensus 269 ~~~ISCPtCGRt~~dl~~~~~~ie~~l~~~~~~lkVAVMGCvVNGPGEa~~ADiGiagg-~~~~~lf~ 335 (366)
T 3noy_A 269 VEIVACPTCGRIEVDLPKVVKEVQEKLSGVKTPLKVAVMGCVVNAIGEAREADIGLACG-RGFAWLFK 335 (366)
T ss_dssp CEEEECCCCTTCCSCHHHHHHHHHHHTTTCCSCCEEEEESSSHHHHHHTTTCSEEEEEC-SSEEEEEE
T ss_pred CEEEECCCCCCccccHHHHHHHHHHHHhCCCCCCEEEEEcccccCCchhhhCCEeEecC-CCceEEEE
Confidence 9999999999999999999999999999999 999999999999999999999999996 89999995
No 3
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=99.67 E-value=1.5e-17 Score=178.08 Aligned_cols=153 Identities=23% Similarity=0.445 Sum_probs=137.5
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCCCCeEEeecccCCCCcccchhhhHHHHHHHhhhcCCceEEEeCCCCChh----hHhHH
Q 005248 550 EDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD----FLRDT 625 (706)
Q Consensus 550 S~k~s~v~~~r~~~~~l~~~~~~~Pli~hlgvTEaG~~~~~~IkSa~~iG~LL~dGIGDtIrvslt~~p~~----ev~~~ 625 (706)
|.|+|++..++++|++|++ .+|||| |||+||||++.+|+||||+|+|+||.||||||||||||++|++ || .+
T Consensus 202 S~KaSdv~~~i~aYr~la~-~~dyPL--HLGvTEAG~~~~G~IKSaigiG~LL~~GIGDTIRVSLT~dP~e~~~~EV-~v 277 (406)
T 4g9p_A 202 SAKVSKARDLVWVYRELAR-RTQAPL--HLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPSPKEPRTKEV-EV 277 (406)
T ss_dssp EEECSSHHHHHHHHHHHHH-HCCSCB--EECCTTCBSHHHHHHHHHHHHHHHHHTTCCSEEECCBCCCTTSCTTHHH-HH
T ss_pred EeecCCHHHHHHHHHHHHH-hCCCCc--eeeeecCCCcccceechHHHHHHHHhccCchhEEeeccCCCCcccHHHH-HH
Confidence 5667999999999999998 899999 9999999999999999999999999999999999999999985 88 79
Q ss_pred HHHHHHHhhcccCCceEeccCCCCcccccHHH-HHHHH-----------HHHhCCCCCCeEEEEcccccCccccccCcee
Q 005248 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE-ISAEI-----------REKTSHLPGVSIAIMGCIVNGPGEMADADFG 693 (706)
Q Consensus 626 a~~ILqa~rlR~~kte~ISCPsCGRTlfDLq~-~~a~I-----------k~~t~hLkglkIAIMGCIVNGPGEmadAD~G 693 (706)
||+|||++|+|.+++++|||||||||.|||.. ++++| +.++.|++++|||||||||||||||+|||||
T Consensus 278 a~~ILqslglR~~~~~iiSCPtCGRt~~d~~~~la~~v~~~l~~~~~~~~~~~~~~~~l~VAVMGCvVNGPGEa~~ADiG 357 (406)
T 4g9p_A 278 AQEILQALGLRAFAPEVTSCPGCGRTTSTFFQELAEEVSRRLKERLPEWRARYPGVEELKVAVMGCVVNGPGESKHAHIG 357 (406)
T ss_dssp HHHHHHHTTSCCCSCEEEECCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGCEEEEESSTTTHHHHHHHSSEE
T ss_pred HHHHHHHhCCcccCCCcccCCCCCcCcchHHHHHHHHHHHHHhhhhhhhhhccCCCCCCEEEEECCcccCcchhhhcCcC
Confidence 99999999999999999999999999999643 43333 4445678899999999999999999999999
Q ss_pred eeccC---CCceEeeC
Q 005248 694 YVGGA---PGKIDLLW 706 (706)
Q Consensus 694 yvG~~---~gki~LY~ 706 (706)
|+|+| +++..||+
T Consensus 358 i~~~G~G~~~~~~lf~ 373 (406)
T 4g9p_A 358 ISLPGAGEEPKAPVYA 373 (406)
T ss_dssp EECCCTTSCSEEEEEE
T ss_pred cccCCCCCCCeeeEEE
Confidence 99743 44777874
No 4
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=99.62 E-value=1.2e-16 Score=169.26 Aligned_cols=68 Identities=21% Similarity=0.237 Sum_probs=63.8
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCCCCeEEeecccCCCCcccchhhhHHHHHHHhhhcCCceEEEeCCCCChh
Q 005248 550 EDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620 (706)
Q Consensus 550 S~k~s~v~~~r~~~~~l~~~~~~~Pli~hlgvTEaG~~~~~~IkSa~~iG~LL~dGIGDtIrvslt~~p~~ 620 (706)
|.|+|++..++++|++|++ .+|||| |+|+||||++.+|+||||+|+|+||+||||||||||++++|++
T Consensus 183 S~K~S~v~~~i~ayr~la~-~~dyPL--HlGvTEAG~~~~G~ikSsigiG~LL~dGIGDTIRVSLt~~p~~ 250 (366)
T 3noy_A 183 SIKGSDVLQNVRANLIFAE-RTDVPL--HIGITEAGMGTKGIIKSSVGIGILLYMGIGDTVRVSLTDDPVV 250 (366)
T ss_dssp EEECSSHHHHHHHHHHHHH-HCCCCE--EECCSSCCSHHHHHHHHHHHHHHHHHTTCCSEECCCCSSCHHH
T ss_pred eeecCChHHHHHHHHHHHh-ccCCCE--EEccCCCCCCcceeeehHHHHHHHHHhcccceEEEeCCCCcHH
Confidence 5667999999999999998 699999 9999999999999999999999999999999999999987653
No 5
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=99.37 E-value=6e-12 Score=128.19 Aligned_cols=188 Identities=15% Similarity=0.150 Sum_probs=145.8
Q ss_pred CceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC------------HHHHHHHHHHHHh
Q 005248 87 KTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG------------KREADACFEIKNS 154 (706)
Q Consensus 87 ~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~------------~~~A~al~~I~~~ 154 (706)
++++|.||++.||++ |++|+.+ ....|.+.+.+.+.+++++||++||..+.. .+..+.|.+++++
T Consensus 9 ~~~~i~i~~~~iG~~-~~vIAgp--c~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~ 85 (262)
T 1zco_A 9 EKTVVKINDVKFGEG-FTIIAGP--CSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADE 85 (262)
T ss_dssp SCCCEEETTEEETSS-CEEEEEC--SBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH
T ss_pred CCceEEECCEEECCC-cEEEEeC--CCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHH
Confidence 678899999999999 9999999 466789999999999999999999999866 6666677777664
Q ss_pred hccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 155 LVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 155 L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
..+|+++|+|....+. .+++.++.+.|+++|+.+ .++++.+-+.|+||
T Consensus 86 -----~Gl~~~te~~d~~~~~-~l~~~vd~~kIga~~~~n--------------------------~~ll~~~a~~~kPV 133 (262)
T 1zco_A 86 -----YGLVTVTEVMDTRHVE-LVAKYSDILQIGARNSQN--------------------------FELLKEVGKVENPV 133 (262)
T ss_dssp -----HTCEEEEECCCGGGHH-HHHHHCSEEEECGGGTTC--------------------------HHHHHHHTTSSSCE
T ss_pred -----cCCcEEEeeCCHHhHH-HHHhhCCEEEECcccccC--------------------------HHHHHHHHhcCCcE
Confidence 7799999999987744 445679999999999965 23666666699999
Q ss_pred EEecCCCCCchhHHHhhC-C-ChHHHHHHHHHHHHHHHHCCCCcEEEEE-------ecCChhHHHHHHHHHHHhhhcCCC
Q 005248 235 RIGTNHGSLSDRIMSYYG-D-SPRGMVESAFEFARICRKLDFHNFLFSM-------KASNPVVMVQAYRLLVAEMYVHGW 305 (706)
Q Consensus 235 RIGvN~GSL~~~il~ryg-d-t~eamVeSAle~~~i~e~~~f~~iviS~-------KaSnv~~~i~ayrlla~~~~~eg~ 305 (706)
.+ +.| . |++.|..++ +++...|-.++.+=- +.+...+.++++..|.++ +
T Consensus 134 ~l-------------k~G~~~t~~e~~~Av----~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~-----~ 191 (262)
T 1zco_A 134 LL-------------KRGMGNTIQELLYSA----EYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKEL-----S 191 (262)
T ss_dssp EE-------------ECCTTCCHHHHHHHH----HHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHH-----B
T ss_pred EE-------------ecCCCCCHHHHHHHH----HHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhh-----h
Confidence 88 335 3 666666655 667888888887743 333344456788888887 7
Q ss_pred CCcccccccccCCCCC---CchhhHHHHH
Q 005248 306 DYPLHLGVTEAGEGED---GRMKSAIGIG 331 (706)
Q Consensus 306 ~YPLHLGVTEAG~g~~---G~IKSavGiG 331 (706)
++|+|...|.++...+ ...+.|+++|
T Consensus 192 ~~pVi~d~sH~~g~~~~v~~~~~aAva~G 220 (262)
T 1zco_A 192 HLPIIVDPSHPAGRRSLVIPLAKAAYAIG 220 (262)
T ss_dssp SSCEEECSSTTTCSGGGHHHHHHHHHHTT
T ss_pred CCCEEEEcCCCCCccchHHHHHHHHHHcC
Confidence 9999999999976555 4444455443
No 6
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=98.58 E-value=8.7e-07 Score=95.08 Aligned_cols=144 Identities=13% Similarity=0.205 Sum_probs=115.2
Q ss_pred eeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEec------------CCHHHHHHHHHHHHhhc
Q 005248 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV------------QGKREADACFEIKNSLV 156 (706)
Q Consensus 89 r~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv------------~~~~~A~al~~I~~~L~ 156 (706)
..|.||++.||+++|+.|.-++... |.+.+.+.+.++.++||++||..+ .+.+.-+.|.+++++
T Consensus 129 t~i~i~~~~iG~~~~~~Iigpcsve--s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~-- 204 (385)
T 3nvt_A 129 TIVTVKGLPIGNGEPVFVFGPCSVE--SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDE-- 204 (385)
T ss_dssp CCEEETTEEETSSSCEEEEECSBCC--CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH--
T ss_pred cEEEECCEEECCCCeEEEEEeCCcC--CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHH--
Confidence 4699999999999999999998887 999999999999999999999987 557777777777775
Q ss_pred cCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 157 QKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 157 ~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
..+|+++|+|....+.+. ++.++-+.|..+|+-+ .++++.+.+.|+||-+
T Consensus 205 ---~Gl~~~te~~d~~~~~~l-~~~vd~lkIgs~~~~n--------------------------~~LL~~~a~~gkPVil 254 (385)
T 3nvt_A 205 ---YGLGVISEIVTPADIEVA-LDYVDVIQIGARNMQN--------------------------FELLKAAGRVDKPILL 254 (385)
T ss_dssp ---HTCEEEEECCSGGGHHHH-TTTCSEEEECGGGTTC--------------------------HHHHHHHHTSSSCEEE
T ss_pred ---cCCEEEEecCCHHHHHHH-HhhCCEEEECcccccC--------------------------HHHHHHHHccCCcEEE
Confidence 789999999998877766 4779999999999965 2589999999999977
Q ss_pred ecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 237 GTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 237 GvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~ 281 (706)
-..-. .|++.| +.| ++.+.+.|-.+|++==
T Consensus 255 k~G~~-----------~t~~e~-~~A---ve~i~~~Gn~~i~L~~ 284 (385)
T 3nvt_A 255 KRGLS-----------ATIEEF-IGA---AEYIMSQGNGKIILCE 284 (385)
T ss_dssp ECCTT-----------CCHHHH-HHH---HHHHHTTTCCCEEEEE
T ss_pred ecCCC-----------CCHHHH-HHH---HHHHHHcCCCeEEEEE
Confidence 66441 133333 233 3346677877776643
No 7
>4g38_A SIR-HP, sirhp, sulfite reductase [NADPH] hemoprotein beta-compon; snirr, oxidoreductase, sulfite reductase flavoprotein; HET: SRM; 1.56A {Escherichia coli} PDB: 4g39_A* 1aop_A* 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A*
Probab=97.93 E-value=5.2e-06 Score=92.86 Aligned_cols=99 Identities=19% Similarity=0.341 Sum_probs=76.4
Q ss_pred CCceEEEeCC------CCChhhHhHHHHHHHHHhhcccC----CceEeccC---CCCcccccHHH----HHHHHHHHhC-
Q 005248 606 LGDGLLLEAP------GQDFDFLRDTSFNLLQGCRMRNT----KTEYVSCP---SCGRTLFDLQE----ISAEIREKTS- 667 (706)
Q Consensus 606 IGDtIrvslt------~~p~~ev~~~a~~ILqa~rlR~~----kte~ISCP---sCGRTlfDLq~----~~a~Ik~~t~- 667 (706)
-|..||++.. +.+.+++ ...+.+|+.+|+... -+..+||| .|+....|-+. ++.++++.+.
T Consensus 386 ~gg~iRlT~~Qniil~gv~~e~l-~~i~~~L~~~Gl~~~~~~~~~~v~aC~G~~~C~~a~~dt~~~a~~L~~~le~~~~~ 464 (570)
T 4g38_A 386 HKGDFRITANQNLIIAGVPESEK-AKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAK 464 (570)
T ss_dssp CSSEEEECTTSCEEEEEEEGGGH-HHHHHHHHHTTTTCCCCHHHHTEEECCCTTTCTTCSSCSTTTHHHHHHHHHHHHHH
T ss_pred hCCeEEECCCCcEEEecCCHHHH-HHHHHHHHHcCCCCCCCCcccCeEECCCCCcccchhHhHHHHHHHHHHHHHHHHhh
Confidence 3678998733 4455555 345799999998622 23578996 79999999654 6777777664
Q ss_pred -CC-C-CCeEEEEcccccCccccccCceeeeccCCCceEeeC
Q 005248 668 -HL-P-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLLW 706 (706)
Q Consensus 668 -hL-k-glkIAIMGCIVNGPGEmadAD~GyvG~~~gki~LY~ 706 (706)
.+ + .+||+|.||. |+-|+..-||+|++|.+++..+||.
T Consensus 465 ~~l~p~~iki~vSGCp-n~C~~~~~aDIGlvG~~~g~y~l~l 505 (570)
T 4g38_A 465 HGVSDEHIVMRVTGCP-NGCGRAMLAEVGLVGKAPGRYNLHL 505 (570)
T ss_dssp TTCTTCCCCEEEESST-TCTTCGGGSSEEEEEEETTEEEEEE
T ss_pred cCCCCCceEEEEeCCC-chhhhccccceEEEEecccceEEEE
Confidence 35 4 7999999999 9999999999999998888888873
No 8
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=97.69 E-value=0.0029 Score=65.98 Aligned_cols=196 Identities=15% Similarity=0.222 Sum_probs=129.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC----------HHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG----------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~----------~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~ 183 (706)
.|.++.+++++++.++|++|+=|-..+ .++.+.+..+.+.|++ .+++||.-|- |++.+|.+|+++ .+
T Consensus 60 ~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~-~~~vpiSIDT-~~~~V~~aAl~aGa~ 137 (297)
T 1tx2_A 60 NEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSK-EVKLPISIDT-YKAEVAKQAIEAGAH 137 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHH-HSCSCEEEEC-SCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHh-cCCceEEEeC-CCHHHHHHHHHcCCC
Confidence 479999999999999999999998644 5555544443344443 2589999998 589999999987 33
Q ss_pred ceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHH
Q 005248 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263 (706)
Q Consensus 184 kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAl 263 (706)
= ||-=|-+... .++++.|+++|.|+=+--+.|- ++ |.|..+.+.+...
T Consensus 138 i--INdvsg~~~d------------------------~~m~~~aa~~g~~vVlmh~~G~-p~-----y~d~v~ev~~~l~ 185 (297)
T 1tx2_A 138 I--INDIWGAKAE------------------------PKIAEVAAHYDVPIILMHNRDN-MN-----YRNLMADMIADLY 185 (297)
T ss_dssp E--EEETTTTSSC------------------------THHHHHHHHHTCCEEEECCCSC-CC-----CSSHHHHHHHHHH
T ss_pred E--EEECCCCCCC------------------------HHHHHHHHHhCCcEEEEeCCCC-CC-----cchHHHHHHHHHH
Confidence 2 4544432211 2477889999999966666553 22 7777889999999
Q ss_pred HHHHHHHHCCCC--cEEEEEecCChhHHHHHHHHHHHhhhcCCCCCccccccccc-------CCCCCCchhhHHHHHHHh
Q 005248 264 EFARICRKLDFH--NFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEA-------GEGEDGRMKSAIGIGTLL 334 (706)
Q Consensus 264 e~~~i~e~~~f~--~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLHLGVTEA-------G~g~~G~IKSavGiG~LL 334 (706)
+.++.|++.|+. +|+|--=.--....-+.|.+|..--.=....||+=+|+.=- |....-++-.+++..++.
T Consensus 186 ~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~~ll~~l~~l~~lg~Pvl~G~Srksfig~~~g~~~~~r~~~t~a~~~~a 265 (297)
T 1tx2_A 186 DSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLG 265 (297)
T ss_dssp HHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEEECTTCHHHHHHHTCCGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhcEEEeCCCCcCCCHHHHHHHHHHHHHHHhCCCCEEEEeccchhhhhhcCCCHHHhHHHHHHHHHHH
Confidence 999999999997 89986421001112233333322111111589999999711 122345666666555444
Q ss_pred hcCCCceeEE
Q 005248 335 QDGLGDTIRV 344 (706)
Q Consensus 335 ~dGIGDTIRV 344 (706)
..-=.+=|||
T Consensus 266 ~~~ga~Ivrv 275 (297)
T 1tx2_A 266 IEKGCEFVRV 275 (297)
T ss_dssp HHTTCSEEEE
T ss_pred HHCCCcEEEe
Confidence 4333678888
No 9
>1aop_A Sirhp, sulfite reductase hemoprotein; oxidoreductase, siroheme, [4Fe-4S], snirr, six-electron REDU phosphate complex; HET: SRM; 1.60A {Escherichia coli} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A*
Probab=97.64 E-value=2.5e-05 Score=85.48 Aligned_cols=101 Identities=19% Similarity=0.309 Sum_probs=75.1
Q ss_pred hhcCCceEEEeCC------CCChhhHhHHHHHHHHHhhcccCC----ceEeccC---CCCcccccHHH----HHHHHHHH
Q 005248 603 VDGLGDGLLLEAP------GQDFDFLRDTSFNLLQGCRMRNTK----TEYVSCP---SCGRTLFDLQE----ISAEIREK 665 (706)
Q Consensus 603 ~dGIGDtIrvslt------~~p~~ev~~~a~~ILqa~rlR~~k----te~ISCP---sCGRTlfDLq~----~~a~Ik~~ 665 (706)
.+-.|..||++-. +.+.+++ ...+..|+.+|+.... ...++|| .|+.-..|-+. ++.+++++
T Consensus 310 a~~ygg~irlT~~qni~l~gv~~~~l-~~l~~~L~~~Gl~~~~~~~~r~i~aC~G~~~C~~a~~dt~~~a~~l~~~l~~~ 388 (497)
T 1aop_A 310 AKIHKGDFRITANQNLIIAGVPESEK-AKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNL 388 (497)
T ss_dssp HHHCSSEEEECTTSCEEEEEEEGGGH-HHHHHHHHHTTTTCCCCHHHHTEEECCCTTTCTTCSSCSTTTHHHHHHHHHHH
T ss_pred HHHhCCEEEEcCCCCEEEecCCHHHH-HHHHHHHHHCCCCCCCCCceeeeecccCcccCcchhhhHHHHHHHHHHHHHHH
Confidence 3334567888643 3444555 3457889999987422 3579995 79998988665 66777766
Q ss_pred hC--CC-C-CCeEEEEcccccCccccccCceeeeccCCCceEee
Q 005248 666 TS--HL-P-GVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLL 705 (706)
Q Consensus 666 t~--hL-k-glkIAIMGCIVNGPGEmadAD~GyvG~~~gki~LY 705 (706)
+. .+ + .+||+|.||. |+-|...-||+|++|..+|+.+||
T Consensus 389 ~~~~~l~p~~~~i~vSGCp-n~C~~~~~aDIGi~G~~~g~y~i~ 431 (497)
T 1aop_A 389 MAKHGVSDEHIVMRVTGCP-NGCGRAMLAEVGLVGKAPGRYNLH 431 (497)
T ss_dssp HHHTTCTTCCCCEEEESST-TCTTCGGGSSEEEEEEETTEEEEE
T ss_pred HhhcCCCCcceEEEEECCc-chhhhhccCCEEEEEecCCCEEEE
Confidence 54 24 4 7999999999 999999999999999988877777
No 10
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=97.55 E-value=0.0014 Score=71.99 Aligned_cols=214 Identities=13% Similarity=0.156 Sum_probs=140.7
Q ss_pred cccccCCCCceeEEEc----eeecCCC-----------CceEEEeccCCCCCC---HHHHHHHHHHHH------HcCCCE
Q 005248 79 SIHKTVRRKTRTVMVG----NVAIGSE-----------HPIRVQTMTTNDTKD---VAGTVEEVMRIA------DQGADL 134 (706)
Q Consensus 79 s~~~~~Rr~Tr~V~VG----~v~IGG~-----------~PI~VQSMt~t~T~D---v~atv~Qi~~L~------~aGcei 134 (706)
.+-.....+-|+|.+| .++|||+ ||=+| -|.=+|+.+ +++-++.+..+. ..|.|+
T Consensus 52 ~la~~lappI~~V~iG~G~~~v~iGGEtvL~rhE~tf~n~p~i-a~~V~D~~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ 130 (446)
T 4djd_C 52 ALDAAAAPPIAKVVLGAGPTAVEMGDETELFRHDKRFYHETAI-AIQVSDNLSSEELKAKVEAINGLNFDRVGQHYTIQA 130 (446)
T ss_dssp HHHHTTSCSSCEEEESSTTSCEEEECCCCSSGGGSCCCSCCEE-EEEEETTSCHHHHHHHHHHHTTCCEEETTEEECCCE
T ss_pred HHHhhccCCceeEEecCCcEEEEECCeeeEEeCCcCCCCCCeE-EEEEeCCCChHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 4555556677889998 5888986 33322 233344544 556666665543 348899
Q ss_pred EEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCcee--eCCCCCCcchhhccccccchHHHHHH
Q 005248 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIR--VNPGNFADRRAQFEQLEYTDDEYQKE 212 (706)
Q Consensus 135 VRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiR--INPGNig~~~k~F~~~~YtdeeY~~E 212 (706)
|-|-.-+.+.++ +..+.+.+.+ .+++||+=|- +|+.++.+|++.+...| ||.-+
T Consensus 131 ial~~~s~dpe~-~~~vVk~V~e-~~dvPL~IDS-~dpevleaALea~a~~~plI~sat--------------------- 186 (446)
T 4djd_C 131 IAIRHDADDPAA-FKAAVASVAA-ATQLNLVLMA-DDPDVLKEALAGVADRKPLLYAAT--------------------- 186 (446)
T ss_dssp EEEECCSSSTHH-HHHHHHHHHT-TCCSEEEEEC-SCHHHHHHHHGGGGGGCCEEEEEC---------------------
T ss_pred EEEEeCCCCHHH-HHHHHHHHHH-hCCCCEEEec-CCHHHHHHHHHhhcCcCCeeEecc---------------------
Confidence 877665443322 3333333332 5899999997 99999999999864433 55533
Q ss_pred HhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHH
Q 005248 213 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQA 292 (706)
Q Consensus 213 l~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~a 292 (706)
+++++.+.+.|++||.|+=.=.| +++.+.+.++++.++|++||++--=......+.+.
T Consensus 187 ----~dn~e~m~~lAa~y~~pVi~~~~------------------dl~~lkelv~~a~~~GI~~IvLDPG~~g~~~t~~~ 244 (446)
T 4djd_C 187 ----GANYEAMTALAKENNCPLAVYGN------------------GLEELAELVDKIVALGHKQLVLDPGARETSRAIAD 244 (446)
T ss_dssp ----TTTHHHHHHHHHHTTCCEEEECS------------------SHHHHHHHHHHHHHTTCCCEEEECCCCSHHHHHHH
T ss_pred ----hhhHHHHHHHHHHcCCcEEEEec------------------cHHHHHHHHHHHHHCCCCcEEECCCchhHHHHHHH
Confidence 23677899999999999933221 56788889999999999999997655444444443
Q ss_pred H---HHHHHhhhcCCCCCcccccccccCCCCCCchhhHHHHHHHhhcCCCceeEEe
Q 005248 293 Y---RLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVS 345 (706)
Q Consensus 293 y---rlla~~~~~eg~~YPLHLGVTEAG~g~~G~IKSavGiG~LL~dGIGDTIRVS 345 (706)
+ |.+|=+-.-....||+=+|+.. .+-+.-.+++ ..+++.| +|-+||+
T Consensus 245 ~~~iRr~AL~~~d~~LgyPvi~~~sr----~d~~~E~t~A-~~~i~kg-a~Iv~vh 294 (446)
T 4djd_C 245 FTQIRRLAIKKRFRSFGYPIIALTTA----ANPLDEVLQA-VNYVTKY-ASLVVLR 294 (446)
T ss_dssp HHHHHHHHHHSCCGGGCSCBEEECCC----SSHHHHHHHH-HHHHHTT-CSEEEES
T ss_pred HHHHHHHhhhccCcccCCCEEeccCC----ccHHHHHHHH-HHHHHcC-CeEEEEc
Confidence 3 4443221223356999999977 4566666666 5666666 8888886
No 11
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=97.50 E-value=0.0064 Score=62.79 Aligned_cols=195 Identities=16% Similarity=0.149 Sum_probs=128.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec----CC------HHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-c
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITV----QG------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-F 182 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv----~~------~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~ 182 (706)
..|.++.+++.+++.++|++|+=|-. |+ .++.+.+..+.+.|++. ++||.-|- |++.+|.+|+++ +
T Consensus 25 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT-~~~~va~aAl~aGa 101 (280)
T 1eye_A 25 YLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDT-MRADVARAALQNGA 101 (280)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEEC-SCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeC-CCHHHHHHHHHcCC
Confidence 35899999999999999999999987 44 55666655555666654 79999997 789999999987 3
Q ss_pred CceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHH---hhCCChHHHH
Q 005248 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS---YYGDSPRGMV 259 (706)
Q Consensus 183 ~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~---rygdt~eamV 259 (706)
+= ||=-|-+... ..+++.|+++|.|+=+--+.|- ++.+-. .|.|-.+.+.
T Consensus 102 ~i--INdvsg~~~d------------------------~~m~~~~a~~~~~vVlmh~~G~-p~tm~~~~~~y~dv~~~v~ 154 (280)
T 1eye_A 102 QM--VNDVSGGRAD------------------------PAMGPLLAEADVPWVLMHWRAV-SADTPHVPVRYGNVVAEVR 154 (280)
T ss_dssp CE--EEETTTTSSC------------------------TTHHHHHHHHTCCEEEECCCCS-CTTCTTSCCCCSSHHHHHH
T ss_pred CE--EEECCCCCCC------------------------HHHHHHHHHhCCeEEEEcCCCC-CcchhhcCcchhHHHHHHH
Confidence 22 4433322111 1367888999999966655553 333222 3555556778
Q ss_pred HHHHHHHHHHHHCCCC--cEEEEEec---CCh---hHHHHHHHHHHHhhhcCCCCCccccccccc-----------C--C
Q 005248 260 ESAFEFARICRKLDFH--NFLFSMKA---SNP---VVMVQAYRLLVAEMYVHGWDYPLHLGVTEA-----------G--E 318 (706)
Q Consensus 260 eSAle~~~i~e~~~f~--~iviS~Ka---Snv---~~~i~ayrlla~~~~~eg~~YPLHLGVTEA-----------G--~ 318 (706)
+...+.++.|++.|+. +|+|--=. .+. ..+++.++.|.+ ..||+=+|+.-= | .
T Consensus 155 ~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~~~~~------~g~Pvl~G~Srksfi~~~~~~~~g~~~ 228 (280)
T 1eye_A 155 ADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVA------TGIPVLVGASRKRFLGALLAGPDGVMR 228 (280)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHT------TSSCBEECCTTCHHHHHHTCCSSSCCC
T ss_pred HHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHHHHhhc------CCCCEEEEecchHHHHhhhccccCCCC
Confidence 8889999999999997 89986421 122 233444444432 589999998652 2 1
Q ss_pred CCCCchh-hHHHHHHHhhcCCCceeEEe
Q 005248 319 GEDGRMK-SAIGIGTLLQDGLGDTIRVS 345 (706)
Q Consensus 319 g~~G~IK-SavGiG~LL~dGIGDTIRVS 345 (706)
..+-|.- |++.....++.|. +-|||.
T Consensus 229 ~~~~R~~~t~a~~~~a~~~Ga-~Ivrvh 255 (280)
T 1eye_A 229 PTDGRDTATAVISALAALHGA-WGVRVH 255 (280)
T ss_dssp CGGGGHHHHHHHHHHHHHTTC-SEEEES
T ss_pred CcccchHHHHHHHHHHHHcCC-CEEEeC
Confidence 1222554 5666666777884 788864
No 12
>1zj8_A Probable ferredoxin-dependent nitrite reductase N; NIRA, sulfite, siroheme, Fe4-S4, Cys-Tyr bond, structural proteomics in europe; HET: SRM; 2.80A {Mycobacterium tuberculosis} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 1zj9_A*
Probab=97.46 E-value=0.0001 Score=82.29 Aligned_cols=87 Identities=18% Similarity=0.350 Sum_probs=67.6
Q ss_pred eEEEeCC------CCChhhHhHHHHHHHHHhhcccCC----ceEecc---CCCCcccccH----HHHHHHHHHHhCC---
Q 005248 609 GLLLEAP------GQDFDFLRDTSFNLLQGCRMRNTK----TEYVSC---PSCGRTLFDL----QEISAEIREKTSH--- 668 (706)
Q Consensus 609 tIrvslt------~~p~~ev~~~a~~ILqa~rlR~~k----te~ISC---PsCGRTlfDL----q~~~a~Ik~~t~h--- 668 (706)
.||++-. +.+.+++ ...+..|...|+.... ...++| |.|+.-++|- ..++.++++++..
T Consensus 383 ~irlT~~qniil~~v~~~~l-~~i~~~L~~~Gl~~~~s~~~r~~~aC~G~~~C~~a~~dt~~~a~~l~~~l~~~l~~~~~ 461 (566)
T 1zj8_A 383 RIRFTPYQKLVILDIPDALL-DDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSFAETRVRAQHLVPELERRLEDINS 461 (566)
T ss_dssp CEEECTTSCEEEEEECHHHH-HHHHHHHHHTTCBSSCCHHHHHEEECCBTTTCTTCSSBCHHHHHHHHHHHHHHTHHHHT
T ss_pred EEEECCCCcEEEecCCHHHH-HHHHHHHHHcCCCCCCCCcccccccCCCcccCccchhhHHHHHHHHHHHHHHHhhcccc
Confidence 4777632 3445566 4567888888887654 358999 7899999995 5566777777643
Q ss_pred -CC-CCeEEEEcccccCccccccCceeeecc
Q 005248 669 -LP-GVSIAIMGCIVNGPGEMADADFGYVGG 697 (706)
Q Consensus 669 -Lk-glkIAIMGCIVNGPGEmadAD~GyvG~ 697 (706)
++ .+||+|-||. |+-|...-||+|++|.
T Consensus 462 ~~~~~~ki~vSGCp-N~Ca~~~~aDIGivG~ 491 (566)
T 1zj8_A 462 QLDVPITVNINGCP-NSCARIQIADIGFKGQ 491 (566)
T ss_dssp TCCSCCCEEEESST-TCTTCGGGSSEEEEEE
T ss_pred ccCCCceEEEecCC-ccchhhhhcceeEEEE
Confidence 56 7999999999 9999999999999996
No 13
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=97.29 E-value=0.017 Score=60.46 Aligned_cols=224 Identities=16% Similarity=0.240 Sum_probs=142.0
Q ss_pred CceeEEEc----eeecCCCC--ce---------EEE-ec--cC-CC----------CCCH-HHHHHHHHHHHHcCCCEEE
Q 005248 87 KTRTVMVG----NVAIGSEH--PI---------RVQ-TM--TT-ND----------TKDV-AGTVEEVMRIADQGADLVR 136 (706)
Q Consensus 87 ~Tr~V~VG----~v~IGG~~--PI---------~VQ-SM--t~-t~----------T~Dv-~atv~Qi~~L~~aGceiVR 136 (706)
+-|+|.+| .++|||+. |. +-+ -| .| |+ ..|+ +..+++.+++.+.|+||+=
T Consensus 13 ~i~~v~iG~g~~~~~~GGe~~~~~~~~e~~~~~~p~i~m~I~n~tpdsf~d~i~~~~~~~~~~~~~~A~~~v~~GAdiID 92 (310)
T 2h9a_B 13 KVVEVTLGTGDKTVTLGGDSTLPFLTFEGEMPNPPRFALEVFDTPPTDWPDILVEPFKDVINDPVAWAKKCVEYGADIVA 92 (310)
T ss_dssp CCCEEEESCGGGCEEEECCSSSTTCTTSSCCCSCCEEEEEEESSCCSSCCHHHHGGGTTTTTCHHHHHHHHHHTTCSEEE
T ss_pred cceEEEECCCceEEEECCCccccceecCcCCCCCCeEEEEEeeCCCcccchhhhhhhccHHHHHHHHHHHHHHcCCcEEE
Confidence 45789998 68899987 41 111 22 22 21 1333 6778889999999999999
Q ss_pred Eec----CC------HHHHHHHHHHHHhhccCCcCcceee-cc---CCCHHHHHHHhhh-cC-ceeeCCCCCCcchhhcc
Q 005248 137 ITV----QG------KREADACFEIKNSLVQKNYNIPLVA-DI---HFAPSVALRVAEC-FD-KIRVNPGNFADRRAQFE 200 (706)
Q Consensus 137 vtv----~~------~~~A~al~~I~~~L~~~g~~iPLVA-DI---HF~~~~Al~a~~~-~~-kiRINPGNig~~~k~F~ 200 (706)
|-. |+ .++.+.++.|++. +++||+- |- -|++.++.+|+++ .+ |-=||.=+-.
T Consensus 93 Ig~~StrP~~~~vs~eee~~vV~~v~~~-----~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~------- 160 (310)
T 2h9a_B 93 LRLVSAHPDGQNRSGAELAEVCKAVADA-----IDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKD------- 160 (310)
T ss_dssp EECGGGCTTTTCCCHHHHHHHHHHHHHH-----CSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTT-------
T ss_pred EeCccCCCCCCCCCHHHHHHHHHHHHHh-----CCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCC-------
Confidence 876 43 3446667777764 7899998 87 5899999999998 43 2334532221
Q ss_pred ccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCC--CcEE
Q 005248 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDF--HNFL 278 (706)
Q Consensus 201 ~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f--~~iv 278 (706)
++..+.+.|+++|.|+=+-.+. | ++.+.+.++.|++.|+ ++|+
T Consensus 161 ------------------~~~~~~~~aa~~g~~vv~m~~~------------d-----v~~l~~~~~~a~~~Gi~~e~Ii 205 (310)
T 2h9a_B 161 ------------------NYKPIVATCMVHGHSVVASAPL------------D-----INLSKQLNIMIMEMNLAPNRII 205 (310)
T ss_dssp ------------------THHHHHHHHHHHTCEEEEECSS------------C-----HHHHHHHHHHHHTTTCCGGGEE
T ss_pred ------------------ccHHHHHHHHHhCCCEEEEChh------------H-----HHHHHHHHHHHHHCCCChhhEE
Confidence 2346888999999998443321 1 4778889999999999 7899
Q ss_pred EEEe----cCChhHHHHHHHHHHHh-hh-cCCCCCccccccc-c------cCCCC-------CCchh--hHHHHHHHhhc
Q 005248 279 FSMK----ASNPVVMVQAYRLLVAE-MY-VHGWDYPLHLGVT-E------AGEGE-------DGRMK--SAIGIGTLLQD 336 (706)
Q Consensus 279 iS~K----aSnv~~~i~ayrlla~~-~~-~eg~~YPLHLGVT-E------AG~g~-------~G~IK--SavGiG~LL~d 336 (706)
+--= +++....++.|.+|..- ++ -....||+=+|++ + +-.|. +-|.. +++.-..+++.
T Consensus 206 lDPg~g~~g~~~e~~~~~l~~ir~~al~~~~~lg~P~l~g~SrK~~~~~es~i~~~~~~g~~~~R~~~~~~a~a~~~~~~ 285 (310)
T 2h9a_B 206 MDPLIGALGYGIEYSYSIIERMRLGALTGDKILAMPVVCFIGQEAWKAKEAKDPEVAEWGDYALRAIHWETVTTVALIQA 285 (310)
T ss_dssp EECCCCCTTTTHHHHHHHHHHHHHHHHTTCGGGCSCBEECHHHHHTTSHHHHCSCCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCccccCchHhHHHHHHHHHHhhhhhhhcCCCCEEEEccCcccccccchhhhcccCCChHHcchhHHHHHHHHHHHc
Confidence 8643 22333454666666551 22 2235799999997 3 32221 11221 44444445566
Q ss_pred CCCceeEEecCCCCcccchHHHHHHH
Q 005248 337 GLGDTIRVSLTEPPEKEIDPCRRLAN 362 (706)
Q Consensus 337 GIGDTIRVSLT~dP~~EV~va~~l~~ 362 (706)
| .|-+||. -+.|..-+.++.+
T Consensus 286 G-a~ivrvH----dv~~~~~~~~~~~ 306 (310)
T 2h9a_B 286 G-GHLFVMR----HPKSLAEVKEHLK 306 (310)
T ss_dssp T-CCEEEEC----CHHHHHHHHHHHH
T ss_pred C-CCEEEEC----CHHHHHHHHHHHH
Confidence 6 7888984 2444555555444
No 14
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=97.28 E-value=0.009 Score=65.45 Aligned_cols=202 Identities=15% Similarity=0.159 Sum_probs=130.5
Q ss_pred CCceeEEEc----eeecCCCC-----------ceEEEeccCCCCCCHHHHHHHHHH-----HHHcC----CCEEEEecC-
Q 005248 86 RKTRTVMVG----NVAIGSEH-----------PIRVQTMTTNDTKDVAGTVEEVMR-----IADQG----ADLVRITVQ- 140 (706)
Q Consensus 86 r~Tr~V~VG----~v~IGG~~-----------PI~VQSMt~t~T~Dv~atv~Qi~~-----L~~aG----ceiVRvtv~- 140 (706)
.+.+.+.+| .+.+||.. |-+|=- .=.|+.+-+.-.+.+.. ..+.| +|+|-+-.-
T Consensus 59 p~ikeV~IG~Gek~vkiGge~vl~~~E~~~~np~~ia~-eI~D~~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~~~ 137 (445)
T 2h9a_A 59 PPVALIKVGKGEKVLEIGHETVLFRHDKRFEHPCGLAI-LVEDTLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSS 137 (445)
T ss_dssp CCSCCEEESCTTSCEEECCCCCSSGGGSCCCSCCEEEE-EEETTSCHHHHHHHHHHHHTCEEEETTEEEECCEEEEECTT
T ss_pred ccccccccCCCceeeEeCCcceEEecccccCCCCeEEE-EEecCCChHhHHHHHHHhhhHHHHhhcccccCcEEEEeCCC
Confidence 344667888 88899986 554422 22234444443333333 23356 999888753
Q ss_pred -CHHH-HHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcC--ceeeCCCCCCcchhhccccccchHHHHHHHhhH
Q 005248 141 -GKRE-ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFD--KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHI 216 (706)
Q Consensus 141 -~~~~-A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~--kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I 216 (706)
+.+. +..++.|++ -+++||+=| +||.++.+|++... +-=||.=+
T Consensus 138 ~dpe~~~~~Vk~V~e-----~~dvPlsID--~dp~vleaale~~~d~~pLIns~t------------------------- 185 (445)
T 2h9a_A 138 QDAATFAKAVATARE-----VTDLPFILI--GTPEQLAAALETEGANNPLLYAAT------------------------- 185 (445)
T ss_dssp CCHHHHHHHHHHHHH-----HCCSCEEEE--SCHHHHHHHHHHHGGGCCEEEEEC-------------------------
T ss_pred CCHHHHHHHHHHHHH-----hcCCCEEEE--CCHHHHHHHHHhcCCCCCEEEECC-------------------------
Confidence 2322 233444544 379999999 99999999999843 23344322
Q ss_pred HhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHH
Q 005248 217 EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLL 296 (706)
Q Consensus 217 ~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrll 296 (706)
.+++..+...|++++.++=+ .+. + ++.+.+.++.++++|+.||++.-=..+...+++.++++
T Consensus 186 ~en~~~~~~la~~y~~~vV~---~~~---~------------l~~l~~lv~~a~~~Gi~~IiLDP~~~~~~~sl~~~~~I 247 (445)
T 2h9a_A 186 ADNYEQMVELAKKYNVPLTV---SAK---G------------LDALAELVQKITALGYKNLILDPQPENISEGLFYQTQI 247 (445)
T ss_dssp TTTHHHHHHHHHHHTCCEEE---ECS---S------------HHHHHHHHHHHHHTTCCCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEE---EcC---C------------HHHHHHHHHHHHHCCCCcEEEcCCchhHHHHHHHHHHH
Confidence 12556789999999999844 221 1 67799999999999999999986666677788888777
Q ss_pred HHhh-hcCC--CCCcccccccccCCCCCCchhhHHHHHHHhhcCCCceeEE
Q 005248 297 VAEM-YVHG--WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRV 344 (706)
Q Consensus 297 a~~~-~~eg--~~YPLHLGVTEAG~g~~G~IKSavGiG~LL~dGIGDTIRV 344 (706)
-..- .+.. .-||+=.++||- +-++-.+.+. .++..| +|-+|+
T Consensus 248 R~~al~~~d~~lg~P~i~~vs~~----d~~~ea~lA~-~~~~~G-asIl~~ 292 (445)
T 2h9a_A 248 RRLAIKKLFRPFGYPTIAFALDE----NPYQAVMEAS-VYIAKY-AGIIVL 292 (445)
T ss_dssp HHHHHHSCCGGGCSCBEEECCCS----SHHHHHHHHH-HHHHTT-CSEEEE
T ss_pred HHhhhcCCCcccCCCeeecCCch----hHHHHHHHHH-HHHHcC-CeEEEe
Confidence 6652 1222 459999999998 3343333332 335555 567776
No 15
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=97.27 E-value=0.012 Score=61.92 Aligned_cols=197 Identities=17% Similarity=0.209 Sum_probs=114.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec----CC-----HHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cC
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITV----QG-----KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv----~~-----~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~ 183 (706)
..|.++.+++..++.++|++|+=|=. |+ .+|.+.+..+.+.|++.-.++||.-|- |++.+|.+|+++ .+
T Consensus 61 ~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT-~~~~VaeaAl~aGa~ 139 (318)
T 2vp8_A 61 TFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDT-WRAQVAKAACAAGAD 139 (318)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEEC-SCHHHHHHHHHHTCC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeC-CCHHHHHHHHHhCCC
Confidence 35789999999999999999999875 44 555555544444455432279999985 789999999987 44
Q ss_pred cee-eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHH--hhCCCh----H
Q 005248 184 KIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS--YYGDSP----R 256 (706)
Q Consensus 184 kiR-INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~--rygdt~----e 256 (706)
=|= |+-+| + ..+++.|+++|.|+=+=-+.|-.++.+-. .|.+++ +
T Consensus 140 iINDVsg~~--d--------------------------~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ 191 (318)
T 2vp8_A 140 LINDTWGGV--D--------------------------PAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVD 191 (318)
T ss_dssp EEEETTSSS--S--------------------------TTHHHHHHHHTCEEEEECC-------------CCSCHHHHHH
T ss_pred EEEECCCCC--c--------------------------hHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHH
Confidence 221 23332 1 13678899999998555444432332222 243222 4
Q ss_pred HHHHHHHHHHHHHHHCCCC--cEEEE-----EecCC-hhHHHHHHHHHHHhhhcCCCCCccccccccc-------CCCCC
Q 005248 257 GMVESAFEFARICRKLDFH--NFLFS-----MKASN-PVVMVQAYRLLVAEMYVHGWDYPLHLGVTEA-------GEGED 321 (706)
Q Consensus 257 amVeSAle~~~i~e~~~f~--~iviS-----~KaSn-v~~~i~ayrlla~~~~~eg~~YPLHLGVTEA-------G~g~~ 321 (706)
.+.+...+.++.|++.|+. +|+|- .|... -..+++.++.|.+ ..||+=+|+.-= |....
T Consensus 192 ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~~l~~------lg~PvL~G~SrKsfig~~~g~~~~ 265 (318)
T 2vp8_A 192 AVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVM------TGWPVLMALSNKDVVGETLGVDLT 265 (318)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHHHHHT------TSSCBEECCC--------------
T ss_pred HHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHHHHHh------CCCCEEEEeCcchhhhhhcCCChH
Confidence 4556666778899999996 89874 34321 1233444444432 589999999733 22344
Q ss_pred CchhhHHHHHHHhhcCCCceeEEe
Q 005248 322 GRMKSAIGIGTLLQDGLGDTIRVS 345 (706)
Q Consensus 322 G~IKSavGiG~LL~dGIGDTIRVS 345 (706)
-++-.++.+.++....=.+=|||.
T Consensus 266 ~r~~~t~a~~~~a~~~Ga~IvRvH 289 (318)
T 2vp8_A 266 ERLEGTLAATALAAAAGARMFRVH 289 (318)
T ss_dssp -CHHHHHHHHHHHHHTTCCEEEES
T ss_pred HhHHHHHHHHHHHHHCCCeEEEcC
Confidence 566666655544443336778874
No 16
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=97.23 E-value=0.014 Score=59.90 Aligned_cols=211 Identities=14% Similarity=0.098 Sum_probs=142.8
Q ss_pred ceeecCCCCceEEEeccCCCC---------CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCc
Q 005248 94 GNVAIGSEHPIRVQTMTTNDT---------KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNI 162 (706)
Q Consensus 94 G~v~IGG~~PI~VQSMt~t~T---------~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~i 162 (706)
|-++.|...|+.|===.|... .|.+..+++.+++.++|++|+=|-..+ .++.+.+..+.+.|++ .+++
T Consensus 1 ~~~~~~~~~~~iigEilN~Tpdsf~dg~~~~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~-~~~~ 79 (271)
T 2yci_X 1 GLVPRGSHMFIMIGERINGMFKDIREAILNKDPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQE-VVDL 79 (271)
T ss_dssp CCSCSCCCCCEEEEEEEETTSHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHH-HCCC
T ss_pred CCCCCCCCCCEEEEEecCCChhhHHHhhhhCCHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHH-hCCC
Confidence 346677777766654444333 378999999999999999999998755 3456666665555654 2589
Q ss_pred ceeeccCCCHHHHHHHhhhcCcee-eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC
Q 005248 163 PLVADIHFAPSVALRVAECFDKIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 163 PLVADIHF~~~~Al~a~~~~~kiR-INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
||.-|- |++.++.+|+++++..- ||--|-. ++++..++..|+++|.++=+=-+
T Consensus 80 pisIDT-~~~~v~~aal~a~~Ga~iINdvs~~-----------------------~d~~~~~~~~~a~~~~~vv~m~~-- 133 (271)
T 2yci_X 80 PCCLDS-TNPDAIEAGLKVHRGHAMINSTSAD-----------------------QWKMDIFFPMAKKYEAAIIGLTM-- 133 (271)
T ss_dssp CEEEEC-SCHHHHHHHHHHCCSCCEEEEECSC-----------------------HHHHHHHHHHHHHHTCEEEEESC--
T ss_pred eEEEeC-CCHHHHHHHHHhCCCCCEEEECCCC-----------------------ccccHHHHHHHHHcCCCEEEEec--
Confidence 999997 58999999999864322 5533332 12567789999999999833322
Q ss_pred CCchhHHHhhC--CChHHHHHHHHHHHHHHHHCCCC--cEEEEEe----cCCh---hHHHHHHHHHHHhhhcCC-CCCcc
Q 005248 242 SLSDRIMSYYG--DSPRGMVESAFEFARICRKLDFH--NFLFSMK----ASNP---VVMVQAYRLLVAEMYVHG-WDYPL 309 (706)
Q Consensus 242 SL~~~il~ryg--dt~eamVeSAle~~~i~e~~~f~--~iviS~K----aSnv---~~~i~ayrlla~~~~~eg-~~YPL 309 (706)
+++ | .|.+..++.+.+.++.|++.|+. +|++--= +.+. ..+++.++.|.+. + -.||+
T Consensus 134 --d~~-----G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~----~~p~~p~ 202 (271)
T 2yci_X 134 --NEK-----GVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLM----ANPAPRT 202 (271)
T ss_dssp --BTT-----BCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHHHHHTTS----SSSCCEE
T ss_pred --CCC-----CCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHHHHHHHh----CCCCCCE
Confidence 111 2 25688899999999999999996 6887532 2223 3567777777443 2 25999
Q ss_pred cccccccCCCC--CCchhhHHHHHHHhhcCCCceeEE
Q 005248 310 HLGVTEAGEGE--DGRMKSAIGIGTLLQDGLGDTIRV 344 (706)
Q Consensus 310 HLGVTEAG~g~--~G~IKSavGiG~LL~dGIGDTIRV 344 (706)
=+|+.=-..|. ..++ .+.-....++-|.|= .+|
T Consensus 203 l~G~Snksfg~~~r~~l-~~t~~~~a~~~g~~~-~iv 237 (271)
T 2yci_X 203 VLGLSNVSQKCPDRPLI-NRTYLVMAMTAGLDA-AIM 237 (271)
T ss_dssp EEEGGGGGTTCSSHHHH-HHHHHHHHHHHTCCE-EEE
T ss_pred EEeeCccccCCchHHHH-HHHHHHHHHHHhCCc-EEE
Confidence 99998666653 3344 333455666777753 334
No 17
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.012 Score=61.47 Aligned_cols=214 Identities=18% Similarity=0.211 Sum_probs=138.9
Q ss_pred eeecCCCCceEEEe-ccCCC----------CCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhcc--CC
Q 005248 95 NVAIGSEHPIRVQT-MTTND----------TKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQ--KN 159 (706)
Q Consensus 95 ~v~IGG~~PI~VQS-Mt~t~----------T~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~--~g 159 (706)
+++||.++|..+=- =+|.. ..|.+..+++.+++.++|++|+=|-... ..+.+.+.++...+.+ .-
T Consensus 3 ~~~~~~~~~~~iIGEriNvTg~~sf~~~~~~~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~ 82 (300)
T 3k13_A 3 ALEVKPEINFVNIGERCNVAGSRKFLRLVNEKKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEI 82 (300)
T ss_dssp ------CTTCEEEEEEEETTTCHHHHHHHHTTCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHH
T ss_pred ceeeCCCCCcEEEEEeccCCCCHHHHHHHhcCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhc
Confidence 45667766555444 23433 3589999999999999999999986432 2344455555544432 13
Q ss_pred cCcceeeccCCCHHHHHHHhhhc-CceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 160 YNIPLVADIHFAPSVALRVAECF-DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 160 ~~iPLVADIHF~~~~Al~a~~~~-~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.++||.-|- |++.++.+|++++ .+-=||-=|.... +++|..+.+.|+++|.|+=+-.
T Consensus 83 ~~vpisIDT-~~~~V~eaaL~~~~Ga~iINdIs~~~~---------------------d~~~~~~~~l~a~~ga~vV~mh 140 (300)
T 3k13_A 83 ARVPVMIDS-SKWEVIEAGLKCLQGKSIVNSISLKEG---------------------EEVFLEHARIIKQYGAATVVMA 140 (300)
T ss_dssp HTSCEEEEC-SCHHHHHHHHHHCSSCCEEEEECSTTC---------------------HHHHHHHHHHHHHHTCEEEEES
T ss_pred CCCeEEEeC-CCHHHHHHHHHhcCCCCEEEeCCcccC---------------------ChhHHHHHHHHHHhCCeEEEEe
Confidence 689999998 8999999999964 3323555444321 3467789999999999984443
Q ss_pred C--CCCCchhHHHhhCCChHHHHHHHHHHHHHH-HHCCC--CcEEEE-----EecCC------hhHHHHHHHHHHHhhhc
Q 005248 239 N--HGSLSDRIMSYYGDSPRGMVESAFEFARIC-RKLDF--HNFLFS-----MKASN------PVVMVQAYRLLVAEMYV 302 (706)
Q Consensus 239 N--~GSL~~~il~rygdt~eamVeSAle~~~i~-e~~~f--~~iviS-----~KaSn------v~~~i~ayrlla~~~~~ 302 (706)
+ .|- + .|.+.-++-|.+..+.| ++.|+ ++|+|- ...+. -..++++++.|.+.
T Consensus 141 ~d~~G~-p--------~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~--- 208 (300)
T 3k13_A 141 FDEKGQ-A--------DTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKN--- 208 (300)
T ss_dssp EETTEE-C--------CSHHHHHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHH---
T ss_pred eCCCCC-C--------CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHh---
Confidence 2 121 1 34556677787888887 99999 789873 22221 34689999999877
Q ss_pred CCC-CCcccccccccCCCCCC----c-hhhHHHHHHHhhcCCCceeEEe
Q 005248 303 HGW-DYPLHLGVTEAGEGEDG----R-MKSAIGIGTLLQDGLGDTIRVS 345 (706)
Q Consensus 303 eg~-~YPLHLGVTEAG~g~~G----~-IKSavGiG~LL~dGIGDTIRVS 345 (706)
+ .||+=+|+.==..|..| | +-.++=+....+.|+ |.-.|-
T Consensus 209 --lPg~pvl~G~SnkSfglp~~~~~R~~~n~~fl~~ai~~Gl-d~~Ivn 254 (300)
T 3k13_A 209 --LPGAHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAIQQGM-DMGIVN 254 (300)
T ss_dssp --STTCEECCBGGGGGGGGTTCHHHHHHHHHHHHHHHHHTTC-CEEEEC
T ss_pred --CCCCCEEEEECcccccCCCCcchhHHHHHHHHHHHHHcCC-CEEecC
Confidence 6 89999999987777775 1 223334444555666 444454
No 18
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=97.08 E-value=0.016 Score=60.40 Aligned_cols=193 Identities=20% Similarity=0.254 Sum_probs=130.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec----CC------HHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITV----QG------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv----~~------~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~ 183 (706)
.|.++.+++..++.++|++|+=|-. |+ .++.+.+..+.+.|++. ++||.-|- |++.+|.+|+++ .+
T Consensus 43 ~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSIDT-~~~~Va~aAl~aGa~ 119 (294)
T 2y5s_A 43 LARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDT-YKPAVMRAALAAGAD 119 (294)
T ss_dssp -CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEEEC-CCHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEEEC-CCHHHHHHHHHcCCC
Confidence 5889999999999999999999987 55 66666666666667664 89999985 789999999987 32
Q ss_pred cee-eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhH---HHhhCCChHHHH
Q 005248 184 KIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI---MSYYGDSPRGMV 259 (706)
Q Consensus 184 kiR-INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~i---l~rygdt~eamV 259 (706)
=|= |+-+| + ..+++.|+++|.|+=+--+.|- ++.+ ...|.|--+.++
T Consensus 120 iINdVsg~~--d--------------------------~~m~~~~a~~~~~vVlmh~~G~-p~tm~~~~~~y~dv~~ev~ 170 (294)
T 2y5s_A 120 LINDIWGFR--Q--------------------------PGAIDAVRDGNSGLCAMHMLGE-PQTMQVGEPDYGDVVTDVR 170 (294)
T ss_dssp EEEETTTTC--S--------------------------TTHHHHHSSSSCEEEEECCCEE-TTTTEECCCCCSSHHHHHH
T ss_pred EEEECCCCC--c--------------------------hHHHHHHHHhCCCEEEECCCCC-CccccccCCccccHHHHHH
Confidence 221 33333 2 1367889999999855544342 2221 124655447889
Q ss_pred HHHHHHHHHHHHCCCC--cEEEEE-----ecCChhHHHHHHHHHHHhhhcC------CCCCcccccccccCC-----CCC
Q 005248 260 ESAFEFARICRKLDFH--NFLFSM-----KASNPVVMVQAYRLLVAEMYVH------GWDYPLHLGVTEAGE-----GED 321 (706)
Q Consensus 260 eSAle~~~i~e~~~f~--~iviS~-----KaSnv~~~i~ayrlla~~~~~e------g~~YPLHLGVTEAG~-----g~~ 321 (706)
+...+.++.|++.|+. +|+|-- |... -+.+.+|. ++.+- ...||+=+|+.-=.. |.+
T Consensus 171 ~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~----~~n~~ll~-~l~~l~~~~~~~~g~Pvl~G~Srksfig~l~g~~ 245 (294)
T 2y5s_A 171 DFLAARAQALRDAGVAAERICVDPGFGFGKAVV----DDNYALLA-ALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGK 245 (294)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTT----HHHHHHHH-TGGGGSCBCTTSSBCCBEEECTTCHHHHTTTTSC
T ss_pred HHHHHHHHHHHHcCCChhhEEEeCCCcccccch----HHHHHHHH-HHHHHHhccccCCCCCEEEEecccHHhhhhcCCC
Confidence 9999999999999997 899853 4331 22222222 22221 357999999865211 222
Q ss_pred ---Cchh-hHHHHHHHhhcCCCceeEEe
Q 005248 322 ---GRMK-SAIGIGTLLQDGLGDTIRVS 345 (706)
Q Consensus 322 ---G~IK-SavGiG~LL~dGIGDTIRVS 345 (706)
.|.- +++-....++.| .+-|||.
T Consensus 246 ~~~~R~~~t~a~~~~a~~~G-a~IvrvH 272 (294)
T 2y5s_A 246 PPLERVAASVAAALCAVERG-AAIVRVH 272 (294)
T ss_dssp CGGGCHHHHHHHHHHHHHTT-CSEEEES
T ss_pred chhhhhHHHHHHHHHHHHcC-CcEEEcC
Confidence 4433 666667777888 7888875
No 19
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=97.02 E-value=0.02 Score=59.25 Aligned_cols=198 Identities=17% Similarity=0.258 Sum_probs=130.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec----CC------HHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-c
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITV----QG------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-F 182 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv----~~------~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~ 182 (706)
..|.++.++++.++.++|++|+=|-. |+ .+|.+.+..+.+.|++. +++||.-|- |++.+|.+|+++ +
T Consensus 34 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~-~~~piSIDT-~~~~va~aAl~aGa 111 (282)
T 1aj0_A 34 HNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQR-FEVWISVDT-SKPEVIRESAKVGA 111 (282)
T ss_dssp CTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHH-CCCEEEEEC-CCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhh-cCCeEEEeC-CCHHHHHHHHHcCC
Confidence 45799999999999999999999987 45 78887777777766653 489999997 679999999987 3
Q ss_pred CceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHH--HhhCCChHHHHH
Q 005248 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM--SYYGDSPRGMVE 260 (706)
Q Consensus 183 ~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il--~rygdt~eamVe 260 (706)
+ =||=-+-+. . ..+++.|+++|.|+=+=-+.|- ++..- ..|.|--+.+.+
T Consensus 112 ~--iINdvsg~~-d------------------------~~~~~~~a~~~~~vVlmh~~G~-p~tm~~~~~y~d~~~ev~~ 163 (282)
T 1aj0_A 112 H--IINDIRSLS-E------------------------PGALEAAAETGLPVCLMHMQGN-PKTMQEAPKYDDVFAEVNR 163 (282)
T ss_dssp C--EEEETTTTC-S------------------------TTHHHHHHHHTCCEEEECCSSC-TTCCSCCCCCSCHHHHHHH
T ss_pred C--EEEECCCCC-C------------------------HHHHHHHHHhCCeEEEEccCCC-CccccccCccchHHHHHHH
Confidence 2 245444321 1 2367888999999855554442 22111 125555577899
Q ss_pred HHHHHHHHHHHCCCC--cEEEEEe---cCChhHHHHHHHHHHHhhhc-CCCCCccccccc------cc-CCCCCCchhhH
Q 005248 261 SAFEFARICRKLDFH--NFLFSMK---ASNPVVMVQAYRLLVAEMYV-HGWDYPLHLGVT------EA-GEGEDGRMKSA 327 (706)
Q Consensus 261 SAle~~~i~e~~~f~--~iviS~K---aSnv~~~i~ayrlla~~~~~-eg~~YPLHLGVT------EA-G~g~~G~IKSa 327 (706)
...+.++.|++.|+. +|+|--= +.+.. +.+.+|..- .+ ....||+=+|+. +- |....-++-.+
T Consensus 164 ~l~~~i~~a~~~Gi~~~~IilDPg~gf~k~~~---~n~~ll~~l-~~~~~~g~P~l~G~Srksfig~~~g~~~~~rl~~t 239 (282)
T 1aj0_A 164 YFIEQIARCEQAGIAKEKLLLDPGFGFGKNLS---HNYSLLARL-AEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGS 239 (282)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECCTTSSCCHH---HHHHHHHTG-GGGGGGCSCBEECCTTCHHHHHHHTCCGGGCHHHH
T ss_pred HHHHHHHHHHHcCCChhhEEEeCCCCcccCHH---HHHHHHHHH-HHHhcCCCCEEEEECccHhHHhhcCCCHHHHHHHH
Confidence 999999999999997 8998631 22222 233333221 11 115899999997 21 22244566666
Q ss_pred HHHHHHhhcCCCceeEEe
Q 005248 328 IGIGTLLQDGLGDTIRVS 345 (706)
Q Consensus 328 vGiG~LL~dGIGDTIRVS 345 (706)
..+.++...-=.+-|||.
T Consensus 240 ~a~~~~a~~~ga~Ivrvh 257 (282)
T 1aj0_A 240 LACAVIAAMQGAHIIRVH 257 (282)
T ss_dssp HHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHCCCeEEEeC
Confidence 555544443334667765
No 20
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=96.98 E-value=0.017 Score=64.75 Aligned_cols=189 Identities=17% Similarity=0.224 Sum_probs=134.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCcee-eCCC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIR-VNPG 190 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiR-INPG 190 (706)
.|.+..+++.+++.++|++|+=|- |+ ..+.+.+.++.+.+++ -+++||.-|- |++.++.+|+++++..- ||-=
T Consensus 337 ~~~~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~-~~~vpisIDT-~~~~v~eaal~~~~G~~iINdi 413 (566)
T 1q7z_A 337 GNEEIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPY-VSNVPLSLDI-QNVDLTERALRAYPGRSLFNSA 413 (566)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHH-HTCSCEEEEC-CCHHHHHHHHHHCSSCCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHh-hCCceEEEeC-CCHHHHHHHHHhcCCCCEEEEC
Confidence 488999999999999999999998 33 2333444444433322 2689999997 58999999999853221 5542
Q ss_pred CCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHH
Q 005248 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICR 270 (706)
Q Consensus 191 Nig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e 270 (706)
|-. +++|..+.+.|+++|.++=+-.+-|..+ .|.+..++.+.+.++.|+
T Consensus 414 s~~-----------------------~~~~~~~~~~~~~~g~~vV~m~~~~~~p--------~t~~~~~~~l~~~~~~a~ 462 (566)
T 1q7z_A 414 KVD-----------------------EEELEMKINLLKKYGGTLIVLLMGKDVP--------KSFEERKEYFEKALKILE 462 (566)
T ss_dssp ESC-----------------------HHHHHHHHHHHHHHCCEEEEESCSSSCC--------CSHHHHHHHHHHHHHHHH
T ss_pred Ccc-----------------------hhhHHHHHHHHHHhCCeEEEEeCCCCCc--------CCHHHHHHHHHHHHHHHH
Confidence 221 1367789999999999986555444221 234568999999999999
Q ss_pred HCCC-CcEEEEEecC------ChhHHHHHHHHHHHhhhcCCCCCcccccccccCCCCC--CchhhHHHHHHHhhcCCCce
Q 005248 271 KLDF-HNFLFSMKAS------NPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED--GRMKSAIGIGTLLQDGLGDT 341 (706)
Q Consensus 271 ~~~f-~~iviS~KaS------nv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~g~~--G~IKSavGiG~LL~dGIGDT 341 (706)
+.|+ +||+|--=.. .-..++++++.+.+. .||+=+|+.--..+.+ .++-++.. ...++.|. |-
T Consensus 463 ~~Gi~~~IilDPg~~~igfgk~~~~~l~~~~~~~~~------g~p~l~G~Snksf~~~~~~~l~~t~a-~~a~~~G~-~i 534 (566)
T 1q7z_A 463 RHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISSK------GFNTTVGLSNLSFGLPDRSYYNTAFL-VLGISKGL-SS 534 (566)
T ss_dssp HTTCGGGEEEECCCCCTTTTCCHHHHHHHHHHHHHT------TCEECCBGGGGSTTSTTHHHHHHHHH-HHHHHTTC-CE
T ss_pred HCCCCCcEEEeCCCCcccCcHHHHHHHHHHHHHHhC------CCCEEEEeCcccccCCHHHHHHHHHH-HHHHHcCC-CE
Confidence 9999 7999864431 336678888887653 8999999987766543 45666666 66667774 88
Q ss_pred eEEe
Q 005248 342 IRVS 345 (706)
Q Consensus 342 IRVS 345 (706)
+||.
T Consensus 535 ~rvh 538 (566)
T 1q7z_A 535 AIMN 538 (566)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8985
No 21
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=96.86 E-value=0.044 Score=55.80 Aligned_cols=190 Identities=13% Similarity=0.072 Sum_probs=130.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec--CCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCc-eeeCCCC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITV--QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDK-IRVNPGN 191 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv--~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~k-iRINPGN 191 (706)
.|.++.+++.+++.++|++|+=|-. +...+.+.+.++.+.+.+ -+++||.-|- |++.+|.+|+++++. -=||-=|
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~-~~~~pisIDT-~~~~v~~aAl~a~~Ga~iINdvs 99 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQE-VSNLTLCLDS-TNIKAIEAGLKKCKNRAMINSTN 99 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHT-TCCSEEEEEC-SCHHHHHHHHHHCSSCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHH-hCCCeEEEeC-CCHHHHHHHHhhCCCCCEEEECC
Confidence 5889999999999999999999985 223355556665555554 3689999996 589999999998633 2255433
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC--CCCCchhHHHhhCCChHHHHHHHHHHHHHH
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN--HGSLSDRIMSYYGDSPRGMVESAFEFARIC 269 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN--~GSL~~~il~rygdt~eamVeSAle~~~i~ 269 (706)
-+ ++.+..+++.|+++|.|+=+=-+ .| .+ .|.+..++.+.+.++.|
T Consensus 100 ~~-----------------------~d~~~~~~~~~a~~~~~vvlmh~~~~G-~p--------~t~~~~~~~~~~~~~~a 147 (262)
T 1f6y_A 100 AE-----------------------REKVEKLFPLAVEHGAALIGLTMNKTG-IP--------KDSDTRLAFAMELVAAA 147 (262)
T ss_dssp SC-----------------------HHHHHHHHHHHHHTTCEEEEESCCSSC-SC--------SSHHHHHHHHHHHHHHH
T ss_pred CC-----------------------cccHHHHHHHHHHhCCcEEEEcCCCCC-CC--------CCHHHHHHHHHHHHHHH
Confidence 32 12566789999999999844332 12 11 24567778889999999
Q ss_pred HHCCCC--cEEEEE----ecCCh---hHHHHHHHHHHHhhhcCCC--CCcccccccccCCCCC--CchhhHHHHHHHhhc
Q 005248 270 RKLDFH--NFLFSM----KASNP---VVMVQAYRLLVAEMYVHGW--DYPLHLGVTEAGEGED--GRMKSAIGIGTLLQD 336 (706)
Q Consensus 270 e~~~f~--~iviS~----KaSnv---~~~i~ayrlla~~~~~eg~--~YPLHLGVTEAG~g~~--G~IKSavGiG~LL~d 336 (706)
++.|+. +|++-- .+.+. ..+++.++.|.++ + .||+=+|+.=-..|.. -++-++.. ...+..
T Consensus 148 ~~~Gi~~~~IilDPg~g~~g~~~~~~~~~l~~l~~l~~~-----~~pg~pvl~G~Srksfg~~~~~~l~~t~~-~~a~~~ 221 (262)
T 1f6y_A 148 DEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKML-----ADPAPKTVLGLSNVSQNCQNRPLINRTFL-AMAMAC 221 (262)
T ss_dssp HHHTCCGGGEEEECCCCCTTTCTTHHHHHHHHHHHHHTC-----CSSCCEEEEEGGGGGTTCSSHHHHHHHHH-HHHHHT
T ss_pred HHCCCCcccEEEeCCCCcCCCChHHHHHHHHHHHHHHHH-----hCCCCCEEEeecCCcCCCCHHHHHHHHHH-HHHHHH
Confidence 999995 898864 23332 4677788877765 5 8999999987666532 34555443 555666
Q ss_pred CCCceeEEe
Q 005248 337 GLGDTIRVS 345 (706)
Q Consensus 337 GIGDTIRVS 345 (706)
|.| -.||-
T Consensus 222 g~~-~~iv~ 229 (262)
T 1f6y_A 222 GLM-SAIAD 229 (262)
T ss_dssp TCC-EEEEC
T ss_pred hCC-eEEEC
Confidence 764 45554
No 22
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=96.75 E-value=0.076 Score=53.91 Aligned_cols=208 Identities=20% Similarity=0.228 Sum_probs=121.8
Q ss_pred ceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcce
Q 005248 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPL 164 (706)
Q Consensus 88 Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPL 164 (706)
++.|+|+++.||.+.|-.+=+-+-+ +.+..++|+.++.++|||+|=+-+.= .++.+.+.+.-..|++.-.++|+
T Consensus 5 ~~~v~v~~~~ig~g~PkIcvpl~~~---t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPi 81 (258)
T 4h3d_A 5 KRKVQVKNITIGEGRPKICVPIIGK---NKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPL 81 (258)
T ss_dssp CCCEEETTEEETSSSCEEEEEECCS---SHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCE
T ss_pred cceEEEcCEEeCCCCCEEEEEeCCC---CHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCE
Confidence 4679999999999999777677643 56888999999999999999777542 22233333333333333346898
Q ss_pred eecc-------CCC--H--HHHH--HHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcC
Q 005248 165 VADI-------HFA--P--SVAL--RVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG 231 (706)
Q Consensus 165 VADI-------HF~--~--~~Al--~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~ 231 (706)
+.=+ +|. . ..++ .+++. |. .+ |.+.+ +..-++.+..+++.+++.|
T Consensus 82 I~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~--------~~-~d----~iDvE---------l~~~~~~~~~l~~~a~~~~ 139 (258)
T 4h3d_A 82 LFTFRSVVEGGEKLISRDYYTTLNKEISNT--------GL-VD----LIDVE---------LFMGDEVIDEVVNFAHKKE 139 (258)
T ss_dssp EEECCCGGGTCSCCCCHHHHHHHHHHHHHT--------TC-CS----EEEEE---------GGGCHHHHHHHHHHHHHTT
T ss_pred EEEEechhhCCCCCCCHHHHHHHHHHHHhc--------CC-ch----hhHHh---------hhccHHHHHHHHHHHHhCC
Confidence 8643 121 1 1111 11111 00 00 11111 1112345677999999999
Q ss_pred CeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCcccc
Q 005248 232 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311 (706)
Q Consensus 232 ~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLHL 311 (706)
+.| |.-+|= |..||.. +.-.+.++-+.+.|-+=++|-..+.+..+..+-.+... ++.+...+.|+ +
T Consensus 140 ~ki-I~S~Hd---------f~~TP~~--~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~~~~-~~~~~~~~~P~-I 205 (258)
T 4h3d_A 140 VKV-IISNHD---------FNKTPKK--EEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATN-EMFKIYADRPI-I 205 (258)
T ss_dssp CEE-EEEEEE---------SSCCCCH--HHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHH-HHHHHTCSSCB-E
T ss_pred CEE-EEEEec---------CCCCCCH--HHHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHHHHH-HHHHhcCCCCE-E
Confidence 877 666552 1235521 23345667778899888899999988877655443322 22222346776 2
Q ss_pred cccccCCCCCCchhhHHH--HHHHhhcC
Q 005248 312 GVTEAGEGEDGRMKSAIG--IGTLLQDG 337 (706)
Q Consensus 312 GVTEAG~g~~G~IKSavG--iG~LL~dG 337 (706)
+ =+||+.|.+--.+| +|+-+.-|
T Consensus 206 ~---~~MG~~G~~SRi~~~~fGS~lTf~ 230 (258)
T 4h3d_A 206 T---MSMSGMGVISRLCGEIFGSALTFG 230 (258)
T ss_dssp E---EECTGGGGGGGTCHHHHCBCEEEC
T ss_pred E---EeCCCCChHHHHHHHHhCCceEec
Confidence 2 36788887755444 44444443
No 23
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=96.70 E-value=0.039 Score=57.53 Aligned_cols=193 Identities=16% Similarity=0.184 Sum_probs=125.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC----------HHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG----------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~----------~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~ 183 (706)
.|.++.+++..++.++|++|+=|=..+ .+|.+.+..+.+.|++. ++||.-|- |++.+|.+|+++ .+
T Consensus 49 ~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSIDT-~~~~Va~aAl~aGa~ 125 (294)
T 2dqw_A 49 LDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSVDT-RKPEVAEEALKLGAH 125 (294)
T ss_dssp ----CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSCEEEEC-SCHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEEC-CCHHHHHHHHHhCCC
Confidence 478999999999999999999998733 45555555555566654 89999986 889999999987 43
Q ss_pred ceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC-CCCchhH--HHhhCCChHHHHH
Q 005248 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH-GSLSDRI--MSYYGDSPRGMVE 260 (706)
Q Consensus 184 kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~-GSL~~~i--l~rygdt~eamVe 260 (706)
=||==+-+ .. ..+++.|+++|.|+=+--+. | .++.+ ...|.|--+.+++
T Consensus 126 --iINdVsg~-~d------------------------~~m~~v~a~~~~~vVlmh~~eG-~p~tm~~~~~y~dv~~ev~~ 177 (294)
T 2dqw_A 126 --LLNDVTGL-RD------------------------ERMVALAARHGVAAVVMHMPVP-DPATMMAHARYRDVVAEVKA 177 (294)
T ss_dssp --EEECSSCS-CC------------------------HHHHHHHHHHTCEEEEECCSSS-CTTTGGGGCCCSSHHHHHHH
T ss_pred --EEEECCCC-CC------------------------hHHHHHHHHhCCCEEEEcCCCC-CCccccccCccccHHHHHHH
Confidence 24432211 11 24788899999998554443 3 22221 2235554578899
Q ss_pred HHHHHHHHHHHCCCCcEEEEE-----ecC-ChhHHHHHHHHHHHhhhcCCCCCccccccccc-------CCC-CCCch-h
Q 005248 261 SAFEFARICRKLDFHNFLFSM-----KAS-NPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEA-------GEG-EDGRM-K 325 (706)
Q Consensus 261 SAle~~~i~e~~~f~~iviS~-----KaS-nv~~~i~ayrlla~~~~~eg~~YPLHLGVTEA-------G~g-~~G~I-K 325 (706)
...+.++.|++.|+.+|+|-- |+- .-..+++.++.|.+ ..||+=+|+.-= |.. .+-|. -
T Consensus 178 ~l~~~i~~a~~~Gi~~IilDPG~Gf~kt~~~n~~ll~~l~~~~~------~g~Pvl~G~Srksfig~l~g~p~~~~R~~~ 251 (294)
T 2dqw_A 178 FLEAQARRALSAGVPQVVLDPGFGFGKLLEHNLALLRRLDEIVA------LGHPVLVGLSRKRTIGELSGVEDPAQRVHG 251 (294)
T ss_dssp HHHHHHHHHHHTTCSCEEEECCTTSSCCHHHHHHHHHTHHHHHT------TSSCBEECCTTCHHHHHHHTCCSGGGCHHH
T ss_pred HHHHHHHHHHHCCCCcEEEcCCCCcccCHHHHHHHHHHHHHHhc------CCCCEEEEeccchhhhhhcCCCchhhhHHH
Confidence 999999999999999999864 211 11223344444332 589999998764 221 12343 3
Q ss_pred hHHHHHHHhhcCCCceeEEe
Q 005248 326 SAIGIGTLLQDGLGDTIRVS 345 (706)
Q Consensus 326 SavGiG~LL~dGIGDTIRVS 345 (706)
|++-....++.|. +-|||.
T Consensus 252 t~a~~~~a~~~Ga-~IvRvH 270 (294)
T 2dqw_A 252 SVAAHLFAVMKGV-RLLRVH 270 (294)
T ss_dssp HHHHHHHHHHTTC-CEEEES
T ss_pred HHHHHHHHHHcCC-cEEEcC
Confidence 4455556677786 888875
No 24
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.49 E-value=0.052 Score=55.94 Aligned_cols=143 Identities=16% Similarity=0.230 Sum_probs=101.1
Q ss_pred CceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe------cC------CHHHHHHHHHHHHh
Q 005248 87 KTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT------VQ------GKREADACFEIKNS 154 (706)
Q Consensus 87 ~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvt------v~------~~~~A~al~~I~~~ 154 (706)
....|.+|++.||++.|+.|==.+ .-.|.+...+-+.++.++|++++|+- .+ +.+.-+.+.+.+++
T Consensus 23 ~~~~i~i~~~~iG~~~~~vIAgpc--~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~ 100 (276)
T 1vs1_A 23 RETVVEVEGVRIGGGSKAVIAGPC--SVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDE 100 (276)
T ss_dssp SCCCEEETTEEEBTTBCEEEEECS--BCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH
T ss_pred CCcEEEECCEEECCCCeEEEEecC--CCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHH
Confidence 355799999999999888888776 77899999999999999999999984 33 24444445555443
Q ss_pred hccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 155 LVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 155 L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
..+|++.++|-...+. ..++.++-+-|--+|+-+ .++++.+-+.|+||
T Consensus 101 -----~Gl~~~te~~d~~~~~-~l~~~vd~~kIgs~~~~n--------------------------~~ll~~~a~~~kPV 148 (276)
T 1vs1_A 101 -----AGLPVVTEVLDPRHVE-TVSRYADMLQIGARNMQN--------------------------FPLLREVGRSGKPV 148 (276)
T ss_dssp -----HTCCEEEECCCGGGHH-HHHHHCSEEEECGGGTTC--------------------------HHHHHHHHHHTCCE
T ss_pred -----cCCcEEEecCCHHHHH-HHHHhCCeEEECcccccC--------------------------HHHHHHHHccCCeE
Confidence 6799999998655544 345668888888888854 34777777899999
Q ss_pred EEecCCCCCchhHHHhhCC-ChHHHHHHHHHHHHHHHHCCCCcEEE
Q 005248 235 RIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLF 279 (706)
Q Consensus 235 RIGvN~GSL~~~il~rygd-t~eamVeSAle~~~i~e~~~f~~ivi 279 (706)
=+-. |- . |++. ++.|.+. +.+.|-.++++
T Consensus 149 ~lk~--G~----------~~t~~e-i~~Ave~---i~~~Gn~~i~L 178 (276)
T 1vs1_A 149 LLKR--GF----------GNTVEE-LLAAAEY---ILLEGNWQVVL 178 (276)
T ss_dssp EEEC--CT----------TCCHHH-HHHHHHH---HHHTTCCCEEE
T ss_pred EEcC--CC----------CCCHHH-HHHHHHH---HHHcCCCeEEE
Confidence 4333 21 2 3333 3444444 34566667666
No 25
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=96.44 E-value=0.097 Score=55.17 Aligned_cols=195 Identities=14% Similarity=0.186 Sum_probs=121.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec----CC----------HHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHh
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITV----QG----------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA 179 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv----~~----------~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~ 179 (706)
..|.++.+++.+++.++|++|+=|=. |+ .+|.+-+..+.+.|++ .+++||.-|- |++.+|.+|+
T Consensus 45 ~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~-~~~vpISIDT-~~~~Va~aAl 122 (314)
T 3tr9_A 45 HLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKK-RFPQLISVDT-SRPRVMREAV 122 (314)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHH-HCCSEEEEEC-SCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHh-hCCCeEEEeC-CCHHHHHHHH
Confidence 46899999999999999999999864 43 2333333333344444 2689999996 8899999999
Q ss_pred hh-cCcee-eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhH--HHhhCCCh
Q 005248 180 EC-FDKIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI--MSYYGDSP 255 (706)
Q Consensus 180 ~~-~~kiR-INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~i--l~rygdt~ 255 (706)
++ ++=|= |+-++. ..+.+.++++|.|+=+--+.|- ++.. ...| |-.
T Consensus 123 ~aGa~iINDVsg~~~----------------------------~~m~~v~a~~g~~vVlMh~~G~-P~tmq~~~~y-dvv 172 (314)
T 3tr9_A 123 NTGADMINDQRALQL----------------------------DDALTTVSALKTPVCLMHFPSE-TRKPGSTTHF-YFL 172 (314)
T ss_dssp HHTCCEEEETTTTCS----------------------------TTHHHHHHHHTCCEEEECCCCT-TCCTTSSCHH-HHH
T ss_pred HcCCCEEEECCCCCc----------------------------hHHHHHHHHhCCeEEEECCCCC-Cccccccccc-chH
Confidence 86 44221 333331 1377888999999966555553 2211 2235 555
Q ss_pred HHHHHHHHHHHHHHHHCCCC--cEEEEEe------cCChhHHHHHHHHHHHhhhc-CCCCCccccccc------cc-CCC
Q 005248 256 RGMVESAFEFARICRKLDFH--NFLFSMK------ASNPVVMVQAYRLLVAEMYV-HGWDYPLHLGVT------EA-GEG 319 (706)
Q Consensus 256 eamVeSAle~~~i~e~~~f~--~iviS~K------aSnv~~~i~ayrlla~~~~~-eg~~YPLHLGVT------EA-G~g 319 (706)
+.+.+...+.++.|++.|+. +|+|--= +.+. -+.|.+|... .+ ....||+=+|+. +- |..
T Consensus 173 ~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~---~~n~~lL~~l-~~l~~lg~PvL~G~SRKsfig~~~~~~ 248 (314)
T 3tr9_A 173 QSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNV---SENFYLLNKL-PEFVAMGLPVLSGWSRKSMIGDVLNQP 248 (314)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCH---HHHHHHHHTT-HHHHTTSSCBEECCTTCHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCH---HHHHHHHHHH-HHHhcCCCCEEEEechhhhhhhhcCCC
Confidence 77889999999999999996 8998531 1122 2233333221 10 125899999982 11 122
Q ss_pred CCCchhhHHHHH-HHhhcCCCceeEEe
Q 005248 320 EDGRMKSAIGIG-TLLQDGLGDTIRVS 345 (706)
Q Consensus 320 ~~G~IKSavGiG-~LL~dGIGDTIRVS 345 (706)
.+-|.--++++. ..++.| -|-|||-
T Consensus 249 ~~~R~~~t~a~~~~a~~~G-a~IvRvH 274 (314)
T 3tr9_A 249 PENRLFGSIAADVLAVYHG-ASIIRTH 274 (314)
T ss_dssp GGGCHHHHHHHHHHHHHTT-CSEEEES
T ss_pred hHHhHHHHHHHHHHHHHcC-CcEEEeC
Confidence 234554444444 444556 4778874
No 26
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=96.30 E-value=0.13 Score=52.90 Aligned_cols=197 Identities=15% Similarity=0.170 Sum_probs=122.1
Q ss_pred eeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH-------HHHHHHHHHHhhccCCcC
Q 005248 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR-------EADACFEIKNSLVQKNYN 161 (706)
Q Consensus 89 r~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~-------~A~al~~I~~~L~~~g~~ 161 (706)
++|.|+++.||++.|...=|-+-. |++...+|+.++.+.|||+|=+-+.-.+ -++.+..||+. -.+
T Consensus 26 ~~v~v~~~~~g~g~p~i~v~l~~~---~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~----~~~ 98 (276)
T 3o1n_A 26 KTVTVRDLVVGEGAPKIIVSLMGK---TITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREI----ITD 98 (276)
T ss_dssp CCEEETTEEETSSSCEEEEEECCS---SHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHH----CCS
T ss_pred eEEEECCEEeCCCCcEEEEEeCCC---CHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHh----cCC
Confidence 359999999999999888887654 4677788888888899999988765322 23444445543 236
Q ss_pred cceeeccC-------C--CHHHHHHHhhhcCceeeC-CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcC
Q 005248 162 IPLVADIH-------F--APSVALRVAECFDKIRVN-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG 231 (706)
Q Consensus 162 iPLVADIH-------F--~~~~Al~a~~~~~kiRIN-PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~ 231 (706)
+|++.=+- | +...-++-.+.+ +|.. | .|.| .|+ ..=++.+..+++.|++.+
T Consensus 99 ~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~--l~~g~~-dyID-------vEl---------~~~~~~~~~l~~~a~~~~ 159 (276)
T 3o1n_A 99 KPLLFTFRSAKEGGEQALTTGQYIDLNRAA--VDSGLV-DMID-------LEL---------FTGDDEVKATVGYAHQHN 159 (276)
T ss_dssp SCEEEECCBGGGTCSBCCCHHHHHHHHHHH--HHHTCC-SEEE-------EEG---------GGCHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEEhhhCCCCCCCHHHHHHHHHHH--HhcCCC-CEEE-------EEC---------cCCHHHHHHHHHHHHhCC
Confidence 89986332 2 222111111110 1221 1 2222 221 112346778999999999
Q ss_pred CeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCcccc
Q 005248 232 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311 (706)
Q Consensus 232 ~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLHL 311 (706)
+.| |+-+| -|..||. -+.-.+.++-+.++|-+=++|-..+.+..+.....+...+. .+...+.|+ +
T Consensus 160 ~kv-I~S~H---------df~~tP~--~~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~~-~~~~~~~Pl-I 225 (276)
T 3o1n_A 160 VAV-IMSNH---------DFHKTPA--AEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEM-QERYADRPI-I 225 (276)
T ss_dssp CEE-EEEEE---------ESSCCCC--HHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHH-HHHTCCSCC-E
T ss_pred CEE-EEEee---------cCCCCcC--HHHHHHHHHHHHHcCCCEEEEEecCCChHHHHHHHHHHHHH-HhcCCCCCE-E
Confidence 888 77666 1334664 35666778888999999999999999888766655544332 111234454 2
Q ss_pred cccccCCCCCCchhhHH
Q 005248 312 GVTEAGEGEDGRMKSAI 328 (706)
Q Consensus 312 GVTEAG~g~~G~IKSav 328 (706)
+ =.||+.|++--..
T Consensus 226 a---~~MG~~G~~SRi~ 239 (276)
T 3o1n_A 226 T---MSMSKTGVISRLA 239 (276)
T ss_dssp E---EECSGGGTHHHHC
T ss_pred E---EECCCchhhHHHH
Confidence 2 3578888765443
No 27
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=96.25 E-value=0.2 Score=51.87 Aligned_cols=188 Identities=16% Similarity=0.257 Sum_probs=121.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEe----------cCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRIT----------VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvt----------v~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~ 183 (706)
.|.++.++|+.++.+.|++|+=|= |+-.+|-+-+..+.+.|++ .++|+--|- |.+.+|.+|+++ ++
T Consensus 27 ~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iSIDT-~~~~Va~~al~aGa~ 103 (270)
T 4hb7_A 27 NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKISVDT-FRSEVAEACLKLGVD 103 (270)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEEEC-SCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc--CCCeEEEEC-CCHHHHHHHHHhccc
Confidence 478999999999999999999993 4445666666666666765 679999995 899999999997 54
Q ss_pred ceeeCC--CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHH
Q 005248 184 KIRVNP--GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261 (706)
Q Consensus 184 kiRINP--GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeS 261 (706)
= ||= |-..| ..+.+.|++++.|+=+==+.|. .+|.+--+.+...
T Consensus 104 i--INDVs~g~~d--------------------------~~m~~~va~~~~~~vlMH~~~~------p~~~~vv~ev~~~ 149 (270)
T 4hb7_A 104 M--INDQWAGLYD--------------------------HRMFQIVAKYDAEIILMHNGNG------NRDEPVVEEMLTS 149 (270)
T ss_dssp E--EEETTTTSSC--------------------------THHHHHHHHTTCEEEEECCCSS------CCSSCHHHHHHHH
T ss_pred e--eccccccccc--------------------------hhHHHHHHHcCCCeEEeccccC------CccccchhHHHHH
Confidence 3 452 21112 1367888999999965444443 1355545566666
Q ss_pred HHHHHHHHHHCCC--CcEEEE-----EecCChhHHHHHHHHHHHhhhcCCCCCcccccccc-------cC--CCCCCchh
Q 005248 262 AFEFARICRKLDF--HNFLFS-----MKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE-------AG--EGEDGRMK 325 (706)
Q Consensus 262 Ale~~~i~e~~~f--~~iviS-----~KaSnv~~~i~ayrlla~~~~~eg~~YPLHLGVTE-------AG--~g~~G~IK 325 (706)
-.+.++.|++.|. ++|+|- -|. .-+-|.+|..--.=....||+=+|+.= .| ....-|.-
T Consensus 150 l~~~i~~a~~aGI~~~~IilDPGiGFgKt-----~~~N~~ll~~l~~~~~lg~PvLvG~SRKsfig~~lg~~~~~~~R~~ 224 (270)
T 4hb7_A 150 LLAQAHQAKIAGIPSNKIWLDPGIGFAKT-----RNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDE 224 (270)
T ss_dssp HHHHHHHHHHTTCCGGGEEEECCTTSSCC-----HHHHHHHHTCHHHHHTTCSCBEECCTTSHHHHHHHCSCCCSGGGHH
T ss_pred HHHHHHHHHHcCCCCceEEEeCCCCcccc-----cccHHHHHhhHHHHhcCCCCEEEEecHHHHHHHHhCCCCChHHhhH
Confidence 7777889999999 688885 242 223344433210012368999999742 12 11223444
Q ss_pred hHHHHHH-HhhcCCCceeEEe
Q 005248 326 SAIGIGT-LLQDGLGDTIRVS 345 (706)
Q Consensus 326 SavGiG~-LL~dGIGDTIRVS 345 (706)
-+++..+ .++.| -+-|||-
T Consensus 225 gt~a~~~~a~~~G-a~ivRVH 244 (270)
T 4hb7_A 225 VTAATTAYGIMKG-VRAVRVH 244 (270)
T ss_dssp HHHHHHHHHHHHT-CCEEEES
T ss_pred HHHHHHHHHHHCC-CCEEEeC
Confidence 4444444 34555 5778864
No 28
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=96.23 E-value=0.3 Score=49.54 Aligned_cols=195 Identities=16% Similarity=0.189 Sum_probs=120.3
Q ss_pred eeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH-------HHHHHHHHHHHhhccCCcC
Q 005248 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK-------READACFEIKNSLVQKNYN 161 (706)
Q Consensus 89 r~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~-------~~A~al~~I~~~L~~~g~~ 161 (706)
+.|+|+++.||.+.|..+=|-+- .|.+..++|+.++.+.|||+|=+-+.-. .-++.+..+++.+ -+
T Consensus 6 ~~~~v~~~~~g~~~p~Icv~l~~---~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~----~~ 78 (257)
T 2yr1_A 6 KAIKVRNIWIGGTEPCICAPVVG---EDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIA----GE 78 (257)
T ss_dssp SCEEETTEEESSSSCEEEEEECC---SSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHS----SS
T ss_pred ceEEEeeeeeCCCCcEEEEEecC---CCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhc----cC
Confidence 35999999999999977777655 5778888999999999999997776322 2244555566532 16
Q ss_pred cceeecc-------CC---CHHHHHHHhhhcCceeeC-CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHc
Q 005248 162 IPLVADI-------HF---APSVALRVAECFDKIRVN-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY 230 (706)
Q Consensus 162 iPLVADI-------HF---~~~~Al~a~~~~~kiRIN-PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~ 230 (706)
+|++.-+ +| +...-++..+.+ +|.. | .|.| .| +..-+ .+..+++.+++.
T Consensus 79 ~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~--~~~g~~-d~iD-------vE---------l~~~~-~~~~l~~~~~~~ 138 (257)
T 2yr1_A 79 IPILFTIRSEREGGQPIPLNEAEVRRLIEAI--CRSGAI-DLVD-------YE---------LAYGE-RIADVRRMTEEC 138 (257)
T ss_dssp CCEEEECCCTTTTCCCCSSCHHHHHHHHHHH--HHHTCC-SEEE-------EE---------GGGTT-HHHHHHHHHHHT
T ss_pred CCEEEEEeecccCCCCCCCCHHHHHHHHHHH--HHcCCC-CEEE-------EE---------CCCCh-hHHHHHHHHHhC
Confidence 8998754 12 222111111110 1111 1 1222 11 11112 566789999998
Q ss_pred CCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCccc
Q 005248 231 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLH 310 (706)
Q Consensus 231 ~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLH 310 (706)
++.| |+-+|= |..||. .+..++.++-++++|.+=++|-..+.+..+.....+...+. +...+.|+
T Consensus 139 ~~kv-I~S~Hd---------f~~tP~--~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll~~~~~~--~~~~~~P~- 203 (257)
T 2yr1_A 139 SVWL-VVSRHY---------FDGTPR--KETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEA--RRELAIPL- 203 (257)
T ss_dssp TCEE-EEEEEE---------SSCCCC--HHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHH--HHHCSSCE-
T ss_pred CCEE-EEEecC---------CCCCcC--HHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHHHHHHHH--hccCCCCE-
Confidence 8876 666661 223553 34556677888999999999999999988776665554332 12234554
Q ss_pred ccccccCCCCCCchhhHH
Q 005248 311 LGVTEAGEGEDGRMKSAI 328 (706)
Q Consensus 311 LGVTEAG~g~~G~IKSav 328 (706)
++ =+||+.|++--..
T Consensus 204 I~---~~MG~~G~~SRi~ 218 (257)
T 2yr1_A 204 IT---MAMGGLGAITRLA 218 (257)
T ss_dssp EE---EECTTTTHHHHHH
T ss_pred EE---EECCCCcchHHHH
Confidence 22 3578888874433
No 29
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=96.16 E-value=0.064 Score=56.64 Aligned_cols=149 Identities=11% Similarity=0.090 Sum_probs=96.9
Q ss_pred HHHHHHHHHHH-HcCCCEEEEe----cCC------HHHHHHHHHHHHhhccCCcCcceeec----cCCCHHHHHHHhhhc
Q 005248 118 AGTVEEVMRIA-DQGADLVRIT----VQG------KREADACFEIKNSLVQKNYNIPLVAD----IHFAPSVALRVAECF 182 (706)
Q Consensus 118 ~atv~Qi~~L~-~aGceiVRvt----v~~------~~~A~al~~I~~~L~~~g~~iPLVAD----IHF~~~~Al~a~~~~ 182 (706)
+..++..+++. +.|+||+=|- =|+ .+.++.++.|++. +++||+-| -=+++.++.+|+++.
T Consensus 80 ~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~-----~~vPlsIDg~~~~T~~~eV~eaAleag 154 (323)
T 4djd_D 80 NEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQA-----VGVPLVVVGCGDVEKDHEVLEAVAEAA 154 (323)
T ss_dssp TCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHH-----CCSCEEEECCSCHHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhh-----CCceEEEECCCCCCCCHHHHHHHHHhc
Confidence 34677777887 9999999984 233 2556666666664 78999999 346789999999985
Q ss_pred Cce--eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHH
Q 005248 183 DKI--RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVE 260 (706)
Q Consensus 183 ~ki--RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVe 260 (706)
... =||.-|.. ++..+.+.|+++|.|+=+-.+. + ++
T Consensus 155 ag~~~lINsv~~~-------------------------~~~~m~~laa~~g~~vVlmh~~-----d------------~~ 192 (323)
T 4djd_D 155 AGENLLLGNAEQE-------------------------NYKSLTAACMVHKHNIIARSPL-----D------------IN 192 (323)
T ss_dssp TTSCCEEEEEBTT-------------------------BCHHHHHHHHHHTCEEEEECSS-----C------------HH
T ss_pred CCCCCeEEECCcc-------------------------cHHHHHHHHHHhCCeEEEEccc-----h------------HH
Confidence 433 36754431 3346889999999999443321 1 24
Q ss_pred HHHHHHHHHHHCCC--CcEEEEEec----CChhHHHHHHHHHHHh-h-hcCCCCCcccccc
Q 005248 261 SAFEFARICRKLDF--HNFLFSMKA----SNPVVMVQAYRLLVAE-M-YVHGWDYPLHLGV 313 (706)
Q Consensus 261 SAle~~~i~e~~~f--~~iviS~Ka----Snv~~~i~ayrlla~~-~-~~eg~~YPLHLGV 313 (706)
-+.+.++.|++.|+ +||++--=. .+....++..+.+-.- + ......||+=+|+
T Consensus 193 ~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~Gv 253 (323)
T 4djd_D 193 ICKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTV 253 (323)
T ss_dssp HHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEH
T ss_pred HHHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEec
Confidence 55566789999999 899985433 3434333333333220 1 1123689999997
No 30
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.00 E-value=0.13 Score=54.83 Aligned_cols=143 Identities=15% Similarity=0.188 Sum_probs=99.5
Q ss_pred ceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe------cC------CHHHHHHHHHHHHhh
Q 005248 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT------VQ------GKREADACFEIKNSL 155 (706)
Q Consensus 88 Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvt------v~------~~~~A~al~~I~~~L 155 (706)
...|.||++.||+++++.|==.+. -.|.+...+-+.++.++|++++|+- .| +.+.-+.|.+.+++
T Consensus 92 ~~~i~i~~~~iG~~~~~vIAgpcs--~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e- 168 (350)
T 1vr6_A 92 DTVIDLGDVKIGNGYFTIIAGPCS--VEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADK- 168 (350)
T ss_dssp CCCEECSSCEESTTEEEEEEECSB--CCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHH-
T ss_pred CCEEEECCEEECCCCeEEEEeCCC--cCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHH-
Confidence 456999999999998888877766 6799999999999999999999984 33 33444444444443
Q ss_pred ccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 156 VQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 156 ~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
..+|++.++|-...+ ...++.++-+-|--+|+-+ .++++.+-+.|+||=
T Consensus 169 ----~Gl~~~te~~d~~~~-~~l~~~vd~lkIgAr~~~n--------------------------~~LL~~va~~~kPVi 217 (350)
T 1vr6_A 169 ----YGMYVVTEALGEDDL-PKVAEYADIIQIGARNAQN--------------------------FRLLSKAGSYNKPVL 217 (350)
T ss_dssp ----HTCEEEEECSSGGGH-HHHHHHCSEEEECGGGTTC--------------------------HHHHHHHHTTCSCEE
T ss_pred ----cCCcEEEEeCCHHHH-HHHHHhCCEEEECcccccC--------------------------HHHHHHHHccCCcEE
Confidence 679999999865444 4445678889998888854 346677778999994
Q ss_pred EecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEE
Q 005248 236 IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF 279 (706)
Q Consensus 236 IGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~ivi 279 (706)
+-..-. .|++.| +.|.| .+...|-.++++
T Consensus 218 lk~G~~-----------~tl~ei-~~Ave---~i~~~GN~~viL 246 (350)
T 1vr6_A 218 LKRGFM-----------NTIEEF-LLSAE---YIANSGNTKIIL 246 (350)
T ss_dssp EECCTT-----------CCHHHH-HHHHH---HHHHTTCCCEEE
T ss_pred EcCCCC-----------CCHHHH-HHHHH---HHHHCCCCeEEE
Confidence 333211 133333 33333 345667778877
No 31
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=95.90 E-value=0.09 Score=51.74 Aligned_cols=151 Identities=11% Similarity=0.119 Sum_probs=96.0
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH--------HHHHHHHHHHhhccCCcCcceee-ccC--
Q 005248 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR--------EADACFEIKNSLVQKNYNIPLVA-DIH-- 169 (706)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~--------~A~al~~I~~~L~~~g~~iPLVA-DIH-- 169 (706)
.-++.+||.+-.+..+.+..++ .++++|.+-|-+..+... ..+.+.++++.|++.|+.+..+. ..|
T Consensus 16 ~~~~gi~~~~~~~~~~~~~~l~---~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~ 92 (295)
T 3cqj_A 16 QIPLGIYEKALPAGECWLERLQ---LAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRR 92 (295)
T ss_dssp CCCEEEEGGGSCCCSCHHHHHH---HHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGT
T ss_pred cccceeeeecCCCCCCHHHHHH---HHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccC
Confidence 3578899988766677776554 566789999999987642 35667888888888898876543 333
Q ss_pred --C---CHH----------HHHH-Hhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC
Q 005248 170 --F---APS----------VALR-VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232 (706)
Q Consensus 170 --F---~~~----------~Al~-a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~ 232 (706)
| ++. .+++ |.+. +..|++.++.... +....+.++++.+.+.++.+.|+++|+
T Consensus 93 ~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~-----------~~~~~~~~~~~~~~l~~l~~~a~~~Gv 161 (295)
T 3cqj_A 93 FPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYY-----------QEANNETRRRFRDGLKESVEMASRAQV 161 (295)
T ss_dssp SCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSS-----------SCCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCc-----------CcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 221 1222 2233 7888886543210 011234567788888999999999996
Q ss_pred eEEEec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 233 AVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 233 ~IRIGv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~ 281 (706)
. |++ |+.. .+..++ -+..+++++.|-.++-+-+
T Consensus 162 ~--l~lEn~~~-------~~~~~~-------~~~~~l~~~v~~~~vg~~~ 195 (295)
T 3cqj_A 162 T--LAMEIMDY-------PLMNSI-------SKALGYAHYLNNPWFQLYP 195 (295)
T ss_dssp E--EEEECCSS-------GGGCSH-------HHHHHHHHHHCCTTEEEEC
T ss_pred E--EEEeeCCC-------cccCCH-------HHHHHHHHhcCCCCeEEEe
Confidence 4 565 4532 122333 3456677777766766654
No 32
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.90 E-value=0.26 Score=47.19 Aligned_cols=176 Identities=13% Similarity=0.101 Sum_probs=110.5
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceee-------ccCC---
Q 005248 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA-------DIHF--- 170 (706)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVA-------DIHF--- 170 (706)
+==|++|=.+..+-.|-+.+.+.+.++.++|++.+++. + .+.++.|++. +++|+++ |.|+
T Consensus 6 ~~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~--~---~~~i~~i~~~-----~~~pv~~~~~~~~~~~~~~i~ 75 (223)
T 1y0e_A 6 GLIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN--T---KEDILAIKET-----VDLPVIGIVKRDYDHSDVFIT 75 (223)
T ss_dssp EEEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE--S---HHHHHHHHHH-----CCSCEEEECBCCCTTCCCCBS
T ss_pred CeEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC--C---HHHHHHHHHh-----cCCCEEeeeccCCCccccccC
Confidence 33478898888888999999999999999999999985 2 3568888875 6789875 5566
Q ss_pred C-HHHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHc--CCeEEEecCCCCCchh
Q 005248 171 A-PSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY--GRAVRIGTNHGSLSDR 246 (706)
Q Consensus 171 ~-~~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~--~~~IRIGvN~GSL~~~ 246 (706)
. ...+..+++. ++.|=+.-...-++. +.+.++++.++++ |.++ +++..
T Consensus 76 ~~~~~i~~~~~~Gad~v~l~~~~~~~p~---------------------~~~~~~i~~~~~~~~~~~v--~~~~~----- 127 (223)
T 1y0e_A 76 ATSKEVDELIESQCEVIALDATLQQRPK---------------------ETLDELVSYIRTHAPNVEI--MADIA----- 127 (223)
T ss_dssp CSHHHHHHHHHHTCSEEEEECSCSCCSS---------------------SCHHHHHHHHHHHCTTSEE--EEECS-----
T ss_pred CcHHHHHHHHhCCCCEEEEeeecccCcc---------------------cCHHHHHHHHHHhCCCceE--EecCC-----
Confidence 2 2334455554 777665543322110 1345688899988 8776 44322
Q ss_pred HHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE------e-cCC-hhHHHHHHHHHHHhhhcCCCCCcccccccccCC
Q 005248 247 IMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSM------K-ASN-PVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318 (706)
Q Consensus 247 il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~------K-aSn-v~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~ 318 (706)
|+ +.++.+++.|.+-|.++. + -.+ ....++.++.+.+. .+.|+
T Consensus 128 -------t~--------~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~-----~~ipv--------- 178 (223)
T 1y0e_A 128 -------TV--------EEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQS-----VDAKV--------- 178 (223)
T ss_dssp -------SH--------HHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHH-----CCSEE---------
T ss_pred -------CH--------HHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhh-----CCCCE---------
Confidence 22 233447788876554432 1 110 23345566666655 45665
Q ss_pred CCCCchhhHHHHHHHhhcCCCceeEE
Q 005248 319 GEDGRMKSAIGIGTLLQDGLGDTIRV 344 (706)
Q Consensus 319 g~~G~IKSavGiG~LL~dGIGDTIRV 344 (706)
--+|-|.|.--+-.++..| =|-+-|
T Consensus 179 ia~GGI~~~~~~~~~~~~G-ad~v~v 203 (223)
T 1y0e_A 179 IAEGNVITPDMYKRVMDLG-VHCSVV 203 (223)
T ss_dssp EEESSCCSHHHHHHHHHTT-CSEEEE
T ss_pred EEecCCCCHHHHHHHHHcC-CCEEEE
Confidence 2356676777777777777 344433
No 33
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=95.39 E-value=0.23 Score=52.11 Aligned_cols=167 Identities=14% Similarity=0.110 Sum_probs=107.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec----CCH------HHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITV----QGK------READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv----~~~------~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~ 183 (706)
.|.++.+++..++.++|++|+=|=. |+. +|.+.+..+.+.|++. +++||.-|- |++.+|.+|+++ ++
T Consensus 30 ~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~-~~vpiSIDT-~~~~Va~aAl~aGa~ 107 (314)
T 2vef_A 30 FALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKE-SDVLISIDT-WKSQVAEAALAAGAD 107 (314)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEC-SCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhh-CCceEEEeC-CCHHHHHHHHHcCCC
Confidence 4789999999999999999999987 442 5555555554455543 589999986 889999999987 43
Q ss_pred cee-eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCC-Cchh---------------
Q 005248 184 KIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS-LSDR--------------- 246 (706)
Q Consensus 184 kiR-INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GS-L~~~--------------- 246 (706)
=|= |+-++. + ..+.+.|+++|.|+=+=-+.|. .++.
T Consensus 108 iINDVsg~~~-d--------------------------~~m~~v~a~~~~~vvlmh~~~~g~p~~~~~~~~~~~~~g~~~ 160 (314)
T 2vef_A 108 LVNDITGLMG-D--------------------------EKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAF 160 (314)
T ss_dssp EEEETTTTCS-C--------------------------TTHHHHHHHHTCEEEEECCHHHHCTTSTTTTTSCCCCC--CC
T ss_pred EEEECCCCCC-C--------------------------hHHHHHHHHcCCCEEEEecCCCCCCCCccccccccccccccc
Confidence 321 223321 1 1366778999999855433320 0100
Q ss_pred ---HHHhhCCC-hHH-HHHHHHHHHHHHHHCCC--CcEEEEE-----ecCChhHHHHHHHHHHHhhhcCCCCCccccccc
Q 005248 247 ---IMSYYGDS-PRG-MVESAFEFARICRKLDF--HNFLFSM-----KASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314 (706)
Q Consensus 247 ---il~rygdt-~ea-mVeSAle~~~i~e~~~f--~~iviS~-----KaSnv~~~i~ayrlla~~~~~eg~~YPLHLGVT 314 (706)
-...|.|- .+. +.+...+.++.|++.|+ ++|+|-- |. ...-.+.+|.|.+.. ...||+=+|+.
T Consensus 161 ~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~kt--~~~nl~ll~~l~~l~---~~g~PvL~G~S 235 (314)
T 2vef_A 161 TEEELADFETLPIEELMEAFFERALARAAEAGIAPENILLDPGIGFGLT--KKENLLLLRDLDKLH---QKGYPIFLGVS 235 (314)
T ss_dssp CC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEEECCTTSSCC--HHHHHHHHHTHHHHH---TTSSCBEEECS
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcccc--hHHHHHHHHHHHHhh---cCCCCEEEEeC
Confidence 01123322 333 45667788999999999 7899975 44 333445555554331 25899999986
Q ss_pred c
Q 005248 315 E 315 (706)
Q Consensus 315 E 315 (706)
-
T Consensus 236 r 236 (314)
T 2vef_A 236 R 236 (314)
T ss_dssp S
T ss_pred c
Confidence 5
No 34
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=95.38 E-value=0.36 Score=47.02 Aligned_cols=152 Identities=14% Similarity=0.112 Sum_probs=96.0
Q ss_pred eEEEeccCCCC-CCHHHHHHHHHHHHHcCCCEEEEecCCH-----HHHHHHHHHHHhhccCCcCcceeeccCCC---H--
Q 005248 104 IRVQTMTTNDT-KDVAGTVEEVMRIADQGADLVRITVQGK-----READACFEIKNSLVQKNYNIPLVADIHFA---P-- 172 (706)
Q Consensus 104 I~VQSMt~t~T-~Dv~atv~Qi~~L~~aGceiVRvtv~~~-----~~A~al~~I~~~L~~~g~~iPLVADIHF~---~-- 172 (706)
+.++|++-.+. .+.+.. +..++++|++-|=+..+.. -..+.+.++++.|++.|+.+..++- |++ +
T Consensus 3 lg~~~~~~~~~~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-~~~~~~~~~ 78 (286)
T 3dx5_A 3 YSLCTISFRHQLISFTDI---VQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISD-YLDISLSAD 78 (286)
T ss_dssp EEEEGGGGTTSCCCHHHH---HHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEEC-CCCCSTTSC
T ss_pred EEEEeeeccCCCCCHHHH---HHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEec-CCCCCCchh
Confidence 55676665442 566655 4556678999888865321 1236788999999999999887752 331 1
Q ss_pred --------HHHHH-Hhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCC
Q 005248 173 --------SVALR-VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (706)
Q Consensus 173 --------~~Al~-a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GS 242 (706)
+.+++ |.+. +..|++.||...... . ..+.++++.+.+.++.+.|+++|+.+=|= ||..
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~-------~----~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE-~~~~ 146 (286)
T 3dx5_A 79 FEKTIEKCEQLAILANWFKTNKIRTFAGQKGSAD-------F----SQQERQEYVNRIRMICELFAQHNMYVLLE-THPN 146 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGG-------S----CHHHHHHHHHHHHHHHHHHHHTTCEEEEE-CCTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCccc-------C----cHHHHHHHHHHHHHHHHHHHHhCCEEEEe-cCCC
Confidence 11223 3333 899999999875421 1 12345788888999999999999866444 3311
Q ss_pred CchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCC
Q 005248 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (706)
Q Consensus 243 L~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSn 285 (706)
.+..++ -+..+++++.|-.++-+-+=..+
T Consensus 147 -------~~~~~~-------~~~~~l~~~~~~~~vg~~~D~~h 175 (286)
T 3dx5_A 147 -------TLTDTL-------PSTLELLGEVDHPNLKINLDFLH 175 (286)
T ss_dssp -------STTSSH-------HHHHHHHHHHCCTTEEEEEEHHH
T ss_pred -------cCcCCH-------HHHHHHHHhcCCCCeEEEecccc
Confidence 122333 34567777777777777664443
No 35
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=95.07 E-value=0.42 Score=49.96 Aligned_cols=152 Identities=9% Similarity=0.025 Sum_probs=98.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEe----cCC---------HHHHHHHHHHHHhhccCCcCcceeeccCC---CHHHHH
Q 005248 113 DTKDVAGTVEEVMRIADQGADLVRIT----VQG---------KREADACFEIKNSLVQKNYNIPLVADIHF---APSVAL 176 (706)
Q Consensus 113 ~T~Dv~atv~Qi~~L~~aGceiVRvt----v~~---------~~~A~al~~I~~~L~~~g~~iPLVADIHF---~~~~Al 176 (706)
...+++..++=+..|.++|.+++=+. .|. ..+.+.++.|++. .-++|+++=... +.+-..
T Consensus 25 ~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~----~~~~~i~~l~~p~~~~~~~i~ 100 (345)
T 1nvm_A 25 HQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGE----ISHAQIATLLLPGIGSVHDLK 100 (345)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTT----CSSSEEEEEECBTTBCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhh----CCCCEEEEEecCCcccHHHHH
Confidence 34688999999999999999999996 332 4466677777764 235676654211 355666
Q ss_pred HHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCCh
Q 005248 177 RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255 (706)
Q Consensus 177 ~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~ 255 (706)
.|+++ ++.+||. ..-. + -+.+.++++.||++|..++..+-..+ ..++
T Consensus 101 ~a~~aGvd~v~I~-----~~~s--------~----------~~~~~~~i~~ak~~G~~v~~~~~~a~---------~~~~ 148 (345)
T 1nvm_A 101 NAYQAGARVVRVA-----THCT--------E----------ADVSKQHIEYARNLGMDTVGFLMMSH---------MIPA 148 (345)
T ss_dssp HHHHHTCCEEEEE-----EETT--------C----------GGGGHHHHHHHHHHTCEEEEEEESTT---------SSCH
T ss_pred HHHhCCcCEEEEE-----Eecc--------H----------HHHHHHHHHHHHHCCCEEEEEEEeCC---------CCCH
Confidence 77776 9999993 1110 0 13577899999999999988862221 1233
Q ss_pred HHHHHHHHHHHHHHHHCCCCcEEEEEecCC----hhHHHHHHHHHHHhhhcCCC--CCcccc
Q 005248 256 RGMVESAFEFARICRKLDFHNFLFSMKASN----PVVMVQAYRLLVAEMYVHGW--DYPLHL 311 (706)
Q Consensus 256 eamVeSAle~~~i~e~~~f~~iviS~KaSn----v~~~i~ayrlla~~~~~eg~--~YPLHL 311 (706)
+-.++.++.+++.|-+ .||++-+. |..+-+-.+.|.+. . +-|+|+
T Consensus 149 ----e~~~~ia~~~~~~Ga~--~i~l~DT~G~~~P~~v~~lv~~l~~~-----~~~~~pi~~ 199 (345)
T 1nvm_A 149 ----EKLAEQGKLMESYGAT--CIYMADSGGAMSMNDIRDRMRAFKAV-----LKPETQVGM 199 (345)
T ss_dssp ----HHHHHHHHHHHHHTCS--EEEEECTTCCCCHHHHHHHHHHHHHH-----SCTTSEEEE
T ss_pred ----HHHHHHHHHHHHCCCC--EEEECCCcCccCHHHHHHHHHHHHHh-----cCCCceEEE
Confidence 3445566777777877 68888553 44433334444444 3 567766
No 36
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=94.73 E-value=0.18 Score=55.38 Aligned_cols=197 Identities=15% Similarity=0.101 Sum_probs=115.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec----CC------HHHHHHHHHHHHhhcc---CC-cCcceeeccCCCHHHHHHHhh
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITV----QG------KREADACFEIKNSLVQ---KN-YNIPLVADIHFAPSVALRVAE 180 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv----~~------~~~A~al~~I~~~L~~---~g-~~iPLVADIHF~~~~Al~a~~ 180 (706)
.|.++.++++.++.++|++|+=|=. |+ .+|.+.+..+.+.|++ .- +++||.-|- |++.+|.+|++
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT-~~~~VaeaAL~ 287 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDT-RKLEVMQKILA 287 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEEC-CCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeC-CCHHHHHHHHh
Confidence 5788999999999999999999874 33 3444544444555655 22 479999996 78999999998
Q ss_pred --h-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhH-HHhhCCChH
Q 005248 181 --C-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI-MSYYGDSPR 256 (706)
Q Consensus 181 --~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~i-l~rygdt~e 256 (706)
+ ++ +-||-=+- . +...+.+.|+++|.|+=+=-+.|- ++.+ ...|.|-.+
T Consensus 288 ~~aGa~-i~INDVsg---~----------------------~d~~m~~v~a~~g~~vVlMh~~G~-P~tmq~~~y~dvv~ 340 (442)
T 3mcm_A 288 KHHDII-WMINDVEC---N----------------------NIEQKAQLIAKYNKKYVIIHNLGI-TDRNQYLDKENAID 340 (442)
T ss_dssp HHGGGC-CEEEECCC---T----------------------THHHHHHHHHHHTCEEEEECC-----------------C
T ss_pred hCCCCC-EEEEcCCC---C----------------------CChHHHHHHHHhCCeEEEECCCCC-CccccccCcccHHH
Confidence 3 32 22442111 1 123578889999999966444453 2221 122767667
Q ss_pred HHHHHHHHHHHHHHHCCC--CcEEEEE-----ecC-ChhHHHHHHHHHHHhhhcCCCCCcccccccccCC--------CC
Q 005248 257 GMVESAFEFARICRKLDF--HNFLFSM-----KAS-NPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE--------GE 320 (706)
Q Consensus 257 amVeSAle~~~i~e~~~f--~~iviS~-----KaS-nv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~--------g~ 320 (706)
.+.+...+.++.|++.|+ ++|++-- |.. .-..+++..+.|.+. ..||+=+|+.==.. ..
T Consensus 341 ev~~~l~~~i~~a~~aGI~~~~IilDPGiGF~Kt~~~nl~lL~~l~~l~~~-----lg~PvLvG~SRKsfig~~~~~~~~ 415 (442)
T 3mcm_A 341 NVCDYIEQKKQILLKHGIAQQNIYFDIGFGFGKKSDTARYLLENIIEIKRR-----LELKALVGHSRKPSVLGLTKDSNL 415 (442)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGEEEECCCC------------CCHHHHHHH-----HTSEEEECCTTCTTTTTCCTTCCH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEeCCCCCCCCHHHHHHHHHHHHHHHhh-----CCCcEEEEechHHHHHHHcCCCCh
Confidence 788899999999999999 7888742 332 223455566666554 48999999864211 11
Q ss_pred CCchhhHHHHHHHhhcCCCceeEE
Q 005248 321 DGRMKSAIGIGTLLQDGLGDTIRV 344 (706)
Q Consensus 321 ~G~IKSavGiG~LL~dGIGDTIRV 344 (706)
+-|.-.+++..++....=-|-|||
T Consensus 416 ~~R~~gt~a~~~~a~~~Ga~ivRv 439 (442)
T 3mcm_A 416 ATLDRATRELSRKLEKLDIDIIRV 439 (442)
T ss_dssp HHHHHHHHHHHHHHTTTTCSEEEE
T ss_pred HHhhHHHHHHHHHHHHCCCCEEec
Confidence 234445555544433322456665
No 37
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=94.62 E-value=0.23 Score=47.55 Aligned_cols=144 Identities=15% Similarity=0.186 Sum_probs=87.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceee----cc-------CCCH----------
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA----DI-------HFAP---------- 172 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVA----DI-------HF~~---------- 172 (706)
..+.+..+ ..++++|.+-|=+..|.... +.++++.|++.|..+..+. |+ +-++
T Consensus 14 ~~~~~~~l---~~~~~~G~~~vEl~~~~~~~---~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 87 (260)
T 1k77_A 14 EVPFIERF---AAARKAGFDAVEFLFPYNYS---TLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADI 87 (260)
T ss_dssp TSCGGGHH---HHHHHHTCSEEECSCCTTSC---HHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHH
T ss_pred CCCHHHHH---HHHHHhCCCEEEecCCCCCC---HHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHH
Confidence 35666555 45566799999988876443 5667777778887766432 11 1122
Q ss_pred HHHHH-Hhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CCCCCchhHHH
Q 005248 173 SVALR-VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMS 249 (706)
Q Consensus 173 ~~Al~-a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~GSL~~~il~ 249 (706)
+.+++ |.+. +..|++.||..... + ...+.++++.+.+.++.+.|+++|+ ||++ ||...+
T Consensus 88 ~~~i~~a~~lG~~~v~~~~g~~~~~--------~---~~~~~~~~~~~~l~~l~~~a~~~gv--~l~~E~~~~~~----- 149 (260)
T 1k77_A 88 DLALEYALALNCEQVHVMAGVVPAG--------E---DAERYRAVFIDNIRYAADRFAPHGK--RILVEALSPGV----- 149 (260)
T ss_dssp HHHHHHHHHTTCSEEECCCCBCCTT--------S---CHHHHHHHHHHHHHHHHHHHGGGTC--EEEECCCCTTT-----
T ss_pred HHHHHHHHHcCCCEEEECcCCCCCC--------C---CHHHHHHHHHHHHHHHHHHHHHcCC--EEEEEeCCccC-----
Confidence 12223 3333 88899999875321 1 1345667888899999999999996 5576 553211
Q ss_pred hhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCC
Q 005248 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (706)
Q Consensus 250 rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSn 285 (706)
.|..++.+.-+..+++++.|-.++-+-+=..+
T Consensus 150 ----~~~~~~~~~~~~~~l~~~~~~~~~g~~~D~~h 181 (260)
T 1k77_A 150 ----KPHYLFSSQYQALAIVEEVARDNVFIQLDTFH 181 (260)
T ss_dssp ----STTBSCCSHHHHHHHHHHHCCTTEEEEEEHHH
T ss_pred ----CCcCccCCHHHHHHHHHHhCCCCEEEEeeHHH
Confidence 01112223334667778878777777664443
No 38
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.31 E-value=0.6 Score=49.81 Aligned_cols=198 Identities=16% Similarity=0.308 Sum_probs=126.1
Q ss_pred eeEEEceeecCCCC-ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe--------cC-------------------
Q 005248 89 RTVMVGNVAIGSEH-PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT--------VQ------------------- 140 (706)
Q Consensus 89 r~V~VG~v~IGG~~-PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvt--------v~------------------- 140 (706)
..|.||++.||+++ |..|==+....-.|.+-..+=|...++|||+.||+- .|
T Consensus 5 ~~i~i~~~~iG~~~~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~ 84 (349)
T 2wqp_A 5 NEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIME 84 (349)
T ss_dssp CEEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHH
T ss_pred CeEEECCEEECCCCceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHH
Confidence 34999999999997 666666777778899999999999999999999996 22
Q ss_pred ----CHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhh
Q 005248 141 ----GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQH 215 (706)
Q Consensus 141 ----~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~ 215 (706)
+.+.-+.|.+.+++ ..+|.++.. ||..-+....++ ++-+-|--+|+-+
T Consensus 85 ~~~l~~e~~~~L~~~~~~-----~Gi~~~st~-~d~~svd~l~~~~v~~~KI~S~~~~n--------------------- 137 (349)
T 2wqp_A 85 RCALNEEDEIKLKEYVES-----KGMIFISTL-FSRAAALRLQRMDIPAYKIGSGECNN--------------------- 137 (349)
T ss_dssp HHCCCHHHHHHHHHHHHH-----TTCEEEEEE-CSHHHHHHHHHHTCSCEEECGGGTTC---------------------
T ss_pred HhCCCHHHHHHHHHHHHH-----hCCeEEEee-CCHHHHHHHHhcCCCEEEECcccccC---------------------
Confidence 12333444444443 668888887 566666666677 9999999999965
Q ss_pred HHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEE-EEecCChh--H--HH
Q 005248 216 IEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF-SMKASNPV--V--MV 290 (706)
Q Consensus 216 I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~ivi-S~KaSnv~--~--~i 290 (706)
-+|++.+-+.|+||=+-+-- .|-+. ++.|.|++ .+.|- +|++ -|=++=+. . -+
T Consensus 138 -----~~LL~~va~~gkPviLstGm------------at~~E-i~~Ave~i---~~~G~-~iiLlhc~s~Yp~~~~~~nL 195 (349)
T 2wqp_A 138 -----YPLIKLVASFGKPIILSTGM------------NSIES-IKKSVEII---REAGV-PYALLHCTNIYPTPYEDVRL 195 (349)
T ss_dssp -----HHHHHHHHTTCSCEEEECTT------------CCHHH-HHHHHHHH---HHHTC-CEEEEECCCCSSCCGGGCCT
T ss_pred -----HHHHHHHHhcCCeEEEECCC------------CCHHH-HHHHHHHH---HHcCC-CEEEEeccCCCCCChhhcCH
Confidence 35889898999999654422 23322 34555554 44444 6655 23222110 1 13
Q ss_pred HHHHHHHHhhhcCCC-CCcccccccccCCCCCCchhhHHHHHHHhhcCCCceeEEecCCCC
Q 005248 291 QAYRLLVAEMYVHGW-DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPP 350 (706)
Q Consensus 291 ~ayrlla~~~~~eg~-~YPLHLGVTEAG~g~~G~IKSavGiG~LL~dGIGDTIRVSLT~dP 350 (706)
.+-..|.++ + ++| +|..-=..| -..-+-|+++|+ |-|-+-.|.|.
T Consensus 196 ~ai~~lk~~-----f~~lp--Vg~sdHt~G-~~~~~AAvAlGA-------~iIEkH~tld~ 241 (349)
T 2wqp_A 196 GGMNDLSEA-----FPDAI--IGLSDHTLD-NYACLGAVALGG-------SILERHFTDRM 241 (349)
T ss_dssp HHHHHHHHH-----CTTSE--EEEECCSSS-SHHHHHHHHHTC-------CEEEEEBCSCT
T ss_pred HHHHHHHHH-----CCCCC--EEeCCCCCc-HHHHHHHHHhCC-------CEEEeCCCccc
Confidence 444455555 4 444 365433333 333444555553 36777766654
No 39
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=94.16 E-value=0.33 Score=46.66 Aligned_cols=123 Identities=11% Similarity=0.052 Sum_probs=84.8
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceee---cc-CCCH----
Q 005248 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA---DI-HFAP---- 172 (706)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVA---DI-HF~~---- 172 (706)
..++.+|+.+--...+.+.++ ..++++|.+-|=+..+... ...++++++.|.+.|..+..+. ++ +-++
T Consensus 4 ~~~lg~~~~~~~~~~~~~~~l---~~~~~~G~~~vEl~~~~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~ 79 (275)
T 3qc0_A 4 VEGLSINLATIREQCGFAEAV---DICLKHGITAIAPWRDQVA-AIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGRE 79 (275)
T ss_dssp CTTEEEEGGGGTTTCCHHHHH---HHHHHTTCCEEECBHHHHH-HHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHH
T ss_pred cccceeeeeeccCCCCHHHHH---HHHHHcCCCEEEecccccc-ccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHH
Confidence 357889988875566777655 5567789999998876433 3567888999999999877654 21 1122
Q ss_pred ------HHHHH-Hhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 173 ------SVALR-VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 173 ------~~Al~-a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
+.+++ |.+. +..|++.||.+.... ..+.+.++++.+.+.++.+.|+++|+.+=|=
T Consensus 80 ~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~----------~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 80 KAIDDNRRAVDEAAELGADCLVLVAGGLPGGS----------KNIDAARRMVVEGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEECBCCCTTC----------CCHHHHHHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCC----------cCHHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 12223 3333 889999999764321 1245567888899999999999999866443
No 40
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=93.54 E-value=0.49 Score=49.58 Aligned_cols=107 Identities=8% Similarity=0.050 Sum_probs=81.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-||+|= .| ..-|.+.+++-+++|++.|. .+ .-|-. +.+.+++|+++ +++|+++|=.+ ++.-+.
T Consensus 186 ~g~d~~l~vD--an-~~~~~~~a~~~~~~l~~~~i-~i--E~P~~-~~~~~~~l~~~-----~~iPI~~de~i~~~~~~~ 253 (379)
T 2rdx_A 186 LEPGEKAMAD--AN-QGWRVDNAIRLARATRDLDY-IL--EQPCR-SYEECQQVRRV-----ADQPMKLDECVTGLHMAQ 253 (379)
T ss_dssp SCTTCEEEEE--CT-TCSCHHHHHHHHHHTTTSCC-EE--ECCSS-SHHHHHHHHTT-----CCSCEEECTTCCSHHHHH
T ss_pred cCCCCEEEEE--CC-CCCCHHHHHHHHHHHHhCCe-EE--eCCcC-CHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 6778888773 12 23467778888888888887 65 43333 67777888874 78999999654 677777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.+++ .+|-|.|.|+.+|.-. .+.++++.|+++|+++=+|-
T Consensus 254 ~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 254 RIVADRGAEICCLKISNLGGLS----------------------KARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp HHHHHTCCSEEEEETTTTTSHH----------------------HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHcCCCCEEEEeccccCCHH----------------------HHHHHHHHHHHcCCeEEEee
Confidence 7765 4999999999998843 56789999999999998874
No 41
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=93.48 E-value=0.25 Score=51.83 Aligned_cols=159 Identities=17% Similarity=0.167 Sum_probs=97.0
Q ss_pred CCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH-------HH-HHHHHHHHHhhccCCcCcceeeccC--
Q 005248 100 SEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK-------RE-ADACFEIKNSLVQKNYNIPLVADIH-- 169 (706)
Q Consensus 100 G~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~-------~~-A~al~~I~~~L~~~g~~iPLVADIH-- 169 (706)
|..|+.+.+. .-.+. .+.+..++++|++-|=+...+. .+ .+.+.++++.|.+.|+.+..++=.+
T Consensus 21 ~~~~~g~~t~---~~~~l---~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~ 94 (394)
T 1xla_A 21 GADPFGVATR---KNLDP---VEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFS 94 (394)
T ss_dssp CCBTTBCCSS---CCCCH---HHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCEEECCCSS
T ss_pred CCCCCccccC---CccCH---HHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEEEecCccC
Confidence 4456654432 22344 4456667788999998886322 11 4678889999999999988775322
Q ss_pred --------C---CHH----------HHH-HHhhh-cCceeeCCCCCCcchhhccccccc-hHHHHHHHhhHHhhHHHHHH
Q 005248 170 --------F---APS----------VAL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYT-DDEYQKELQHIEEVFSPLVE 225 (706)
Q Consensus 170 --------F---~~~----------~Al-~a~~~-~~kiRINPGNig~~~k~F~~~~Yt-deeY~~El~~I~~~f~~vv~ 225 (706)
| ++. .++ .|.+. ++.|++.||..|.. |. +..+.+.++++.+.+.++.+
T Consensus 95 ~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~G~~g~~--------~~~~~~~~~~~~~~~e~L~~l~~ 166 (394)
T 1xla_A 95 HPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSE--------YDGSKDLAAALDRMREGVDTAAG 166 (394)
T ss_dssp SGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTCEES--------SGGGCCHHHHHHHHHHHHHHHHH
T ss_pred CccccCCccCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCccc--------cccccCHHHHHHHHHHHHHHHHH
Confidence 2 221 111 22233 88899999965321 11 12356778999999999999
Q ss_pred HHHHcCCeEEEec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCc-EEEEE
Q 005248 226 KCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHN-FLFSM 281 (706)
Q Consensus 226 ~ake~~~~IRIGv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~-iviS~ 281 (706)
.|+++|..|||++ |+..- . ++ ..++.+.-+.++++++.|-.| +-+-+
T Consensus 167 ~A~~~G~~v~l~lE~~~~e-~----~~----~~~~~t~~~~~~li~~v~~pn~vgl~l 215 (394)
T 1xla_A 167 YIKDKGYNLRIALEPKPNE-P----RG----DIFLPTVGHGLAFIEQLEHGDIVGLNP 215 (394)
T ss_dssp HHHHHTCCCEEEECCCSSS-S----SS----EESSCSHHHHHHHHTTCTTGGGEEECC
T ss_pred HHHhcCCCeEEEEecCCCC-C----Cc----cccCCCHHHHHHHHHHhCCCCceEEEE
Confidence 9999997678887 33210 0 00 112223334556777777665 65544
No 42
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.35 E-value=2.1 Score=43.85 Aligned_cols=161 Identities=14% Similarity=0.110 Sum_probs=95.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec-------CCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCce
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITV-------QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKI 185 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv-------~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~ki 185 (706)
..+++.-++=+..|.++|.+.+=+.. |-+.+++ ++.+.+.+. -++|+.+=. -|.+-...|+++ ++.|
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~---~~~~~~~~~-~~~~~~~l~-~~~~~i~~a~~aG~~~v 100 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSA---EVFAGIRQR-PGVTYAALA-PNLKGFEAALESGVKEV 100 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHH---HHHHHSCCC-TTSEEEEEC-CSHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHH---HHHHHhhhc-CCCEEEEEe-CCHHHHHHHHhCCcCEE
Confidence 35678888888999999999999984 2223332 223344432 457776544 377777788887 9999
Q ss_pred ee-CCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC-CCCchhHHHhhCC-ChHHHHHHH
Q 005248 186 RV-NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH-GSLSDRIMSYYGD-SPRGMVESA 262 (706)
Q Consensus 186 RI-NPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~-GSL~~~il~rygd-t~eamVeSA 262 (706)
+| .+-+=...++.+ ...++..-++++++|+.||++|+.++..+-. ++-++. +. +| +-+
T Consensus 101 ~i~~~~s~~~~~~~~----------~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~-----~~~~~----~~~ 161 (302)
T 2ftp_A 101 AVFAAASEAFSQRNI----------NCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYD-----GDVDP----RQV 161 (302)
T ss_dssp EEEEESCHHHHHHHH----------SSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTT-----BCCCH----HHH
T ss_pred EEEEecCHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC-----CCCCH----HHH
Confidence 97 443211111111 1112334456677999999999999843322 232321 22 33 467
Q ss_pred HHHHHHHHHCCCCcEEEE--EecCChhHHHHHHHHHHH
Q 005248 263 FEFARICRKLDFHNFLFS--MKASNPVVMVQAYRLLVA 298 (706)
Q Consensus 263 le~~~i~e~~~f~~iviS--~KaSnv~~~i~ayrlla~ 298 (706)
+++++.+.+.|-+.|.|. .=..+|..+.+-.+.+.+
T Consensus 162 ~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~ 199 (302)
T 2ftp_A 162 AWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVAS 199 (302)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHH
Confidence 788899999999966655 112345544444444443
No 43
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.15 E-value=1 Score=45.64 Aligned_cols=161 Identities=14% Similarity=0.110 Sum_probs=96.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCH--------HHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCc
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQGK--------READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDK 184 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~~--------~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~k 184 (706)
+.+++.-++=+.+|.++|.+.+=++.|.. .+.+.++.|+ +. -++|+.+=. -|.+-...|+++ ++.
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~----~~-~~~~v~~l~-~n~~~i~~a~~~G~~~ 95 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIR----RA-DGVRYSVLV-PNMKGYEAAAAAHADE 95 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSC----CC-SSSEEEEEC-SSHHHHHHHHHTTCSE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHH----hC-CCCEEEEEe-CCHHHHHHHHHCCCCE
Confidence 46778888889999999999999987422 2334444443 32 356665544 567777788887 999
Q ss_pred eeeC-CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE--EecCCCCCchhHHHhhCCChHHHHHH
Q 005248 185 IRVN-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR--IGTNHGSLSDRIMSYYGDSPRGMVES 261 (706)
Q Consensus 185 iRIN-PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR--IGvN~GSL~~~il~rygdt~eamVeS 261 (706)
|+|- +++=. |.... .....+..-++++++|+.||++|+.++ |+.-.| -++. .+ .+| +.
T Consensus 96 V~i~~~~S~~-----h~~~~-----~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~-~e~~--~~--~~~----~~ 156 (295)
T 1ydn_A 96 IAVFISASEG-----FSKAN-----INCTIAESIERLSPVIGAAINDGLAIRGYVSCVVE-CPYD--GP--VTP----QA 156 (295)
T ss_dssp EEEEEESCHH-----HHHHH-----TSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSE-ETTT--EE--CCH----HH
T ss_pred EEEEEecCHH-----HHHHH-----cCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEec-CCcC--CC--CCH----HH
Confidence 9973 22200 11000 000112233466779999999999999 554332 2221 01 233 56
Q ss_pred HHHHHHHHHHCCCCcEEEE--EecCChhHHHHHHHHHHHh
Q 005248 262 AFEFARICRKLDFHNFLFS--MKASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 262 Ale~~~i~e~~~f~~iviS--~KaSnv~~~i~ayrlla~~ 299 (706)
++++++.+++.|-+.|.|. .=..+|..+.+-.+.+.++
T Consensus 157 ~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 157 VASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHh
Confidence 6788888889999876665 1123455544444444443
No 44
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=93.14 E-value=0.89 Score=44.44 Aligned_cols=131 Identities=11% Similarity=0.071 Sum_probs=80.7
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh
Q 005248 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 181 (706)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~ 181 (706)
-++.+|+.+-.+ .+.+. .+..++++|.+-|=+..... ...+.++++.|++.|+.++.+ |+.
T Consensus 26 mklg~~~~~~~~-~~~~~---~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~l~~~gl~v~~~---~~~---------- 86 (287)
T 3kws_A 26 LKLSFQEGIAPG-ESLNE---KLDFMEKLGVVGFEPGGGGL--AGRVNEIKQALNGRNIKVSAI---CAG---------- 86 (287)
T ss_dssp CEEEEETTSSCC-SSHHH---HHHHHHHTTCCEEECBSTTC--GGGHHHHHHHHTTSSCEECEE---ECC----------
T ss_pred eeEEEEecccCC-CCHHH---HHHHHHHcCCCEEEecCCch--HHHHHHHHHHHHHcCCeEEEE---ecC----------
Confidence 346677776544 45554 45566778999999998853 245788888888888887654 331
Q ss_pred cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCe-EEEecCCCCCchhHHHhhCCC---hHH
Q 005248 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRA-VRIGTNHGSLSDRIMSYYGDS---PRG 257 (706)
Q Consensus 182 ~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~-IRIGvN~GSL~~~il~rygdt---~ea 257 (706)
.|+|+++.+. +..++..+.++..++.|++.|.+ |++...+|..+... -++ -+.
T Consensus 87 ------~~~~l~~~d~-------------~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~----p~~~~~~~~ 143 (287)
T 3kws_A 87 ------FKGFILSTDP-------------AIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPAL----PHTMETRDF 143 (287)
T ss_dssp ------CCSCTTBSSH-------------HHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBC----CSSHHHHHH
T ss_pred ------CCCcCCCCCH-------------HHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCC----CCHHHHHHH
Confidence 2567654331 12234455777899999999997 55554444432100 011 134
Q ss_pred HHHHHHHHHHHHHHCCC
Q 005248 258 MVESAFEFARICRKLDF 274 (706)
Q Consensus 258 mVeSAle~~~i~e~~~f 274 (706)
++++--+.++++++.|.
T Consensus 144 ~~~~l~~l~~~a~~~Gv 160 (287)
T 3kws_A 144 LCEQFNEMGTFAAQHGT 160 (287)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 55555566667777764
No 45
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=93.07 E-value=0.17 Score=53.45 Aligned_cols=112 Identities=14% Similarity=0.078 Sum_probs=83.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR 177 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~ 177 (706)
+|.+-+|.|=- | ..-+.+.+++-+++|++.|.+.+==-++ .+.+.+.+|+++|++.|+++|+++|=-+++.-+..
T Consensus 198 ~g~d~~l~vDa--n-~~~~~~~ai~~~~~l~~~~i~~iE~P~~--~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~ 272 (392)
T 3p3b_A 198 AGPAGKIMIDA--N-NAYNLNLTKEVLAALSDVNLYWLEEAFH--EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIE 272 (392)
T ss_dssp HCTTCCEEEEC--T-TCCCHHHHHHHHHHTTTSCEEEEECSSS--CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEecCCc--ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHH
Confidence 57788888721 2 2346777788888888888766543344 56778888888877778999999998556666776
Q ss_pred Hhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 178 VAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 178 a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
+++ .+|-|.|.|..+ .-. ...++++.|+++|+++=+|
T Consensus 273 ~i~~~~~d~v~ik~~~~-Git----------------------~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 273 WATRGRVDVLQYDIIWP-GFT----------------------HWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp HHHTTSCCEECCBTTTB-CHH----------------------HHHHHHHHHHHTTCEECCB
T ss_pred HHHcCCCCEEEeCcccc-CHH----------------------HHHHHHHHHHHcCCEEEec
Confidence 665 499999999988 422 4577999999999998776
No 46
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=92.94 E-value=0.85 Score=44.15 Aligned_cols=110 Identities=9% Similarity=0.038 Sum_probs=73.8
Q ss_pred CCCCceEEEeccCCCCCCHH--HHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceee-------ccC
Q 005248 99 GSEHPIRVQTMTTNDTKDVA--GTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA-------DIH 169 (706)
Q Consensus 99 GG~~PI~VQSMt~t~T~Dv~--atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVA-------DIH 169 (706)
-++-++++|.-.+.+....+ ...+.+.++.++|+..+.+. + .+.++.|++. +++|+++ |.|
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~--~---~~~i~~i~~~-----~~~p~i~~~~~~~~~~~ 84 (234)
T 1yxy_A 15 KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN--S---VRDIKEIQAI-----TDLPIIGIIKKDYPPQE 84 (234)
T ss_dssp TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE--S---HHHHHHHHTT-----CCSCEEEECBCCCTTSC
T ss_pred hCCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC--C---HHHHHHHHHh-----CCCCEEeeEcCCCCccc
Confidence 46778888988877777667 67888899999999999986 2 2457777774 6789864 667
Q ss_pred C----CHHHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHc--CCeEEEecCC
Q 005248 170 F----APSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY--GRAVRIGTNH 240 (706)
Q Consensus 170 F----~~~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~--~~~IRIGvN~ 240 (706)
+ ....+..++++ ++.|=+.-....+.. .+.+.++++.+++. +.+ |+++.
T Consensus 85 ~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~--------------------~~~~~~~i~~i~~~~~~~~--v~~~~ 140 (234)
T 1yxy_A 85 PFITATMTEVDQLAALNIAVIAMDCTKRDRHD--------------------GLDIASFIRQVKEKYPNQL--LMADI 140 (234)
T ss_dssp CCBSCSHHHHHHHHTTTCSEEEEECCSSCCTT--------------------CCCHHHHHHHHHHHCTTCE--EEEEC
T ss_pred cccCChHHHHHHHHHcCCCEEEEcccccCCCC--------------------CccHHHHHHHHHHhCCCCe--EEEeC
Confidence 6 23556666665 887755443332210 01345688888887 655 45543
No 47
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=92.93 E-value=0.45 Score=49.95 Aligned_cols=109 Identities=14% Similarity=0.224 Sum_probs=83.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+| +-||+|= .| ..-|.+.+++-+++|++.|.+.+==-++ ..+.+.+++|+++ +++|+++|=.+ ++.-+.
T Consensus 188 ~g-d~~l~vD--~n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~~~~~~~~l~~~-----~~iPI~~de~i~~~~~~~ 257 (384)
T 2pgw_A 188 IG-DARLRLD--AN-EGWSVHDAINMCRKLEKYDIEFIEQPTV-SWSIPAMAHVREK-----VGIPIVADQAAFTLYDVY 257 (384)
T ss_dssp ST-TCEEEEE--CT-TCCCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHH-----CSSCEEESTTCCSHHHHH
T ss_pred cC-CcEEEEe--cC-CCCCHHHHHHHHHHHHhcCCCEEeCCCC-hhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 56 7888872 12 2346777888888999999988643332 3457778888886 68999999654 677887
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.+++ .+|-|.|.|+.+|.-. .+.++++.|+++|+++=+|.
T Consensus 258 ~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 258 EICRQRAADMICIGPREIGGIQ----------------------PMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp HHHHTTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHTTCCEEECC
T ss_pred HHHHcCCCCEEEEcchhhCCHH----------------------HHHHHHHHHHHCCCeEeecc
Confidence 7776 4999999999998844 56789999999999987773
No 48
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=92.90 E-value=0.5 Score=45.30 Aligned_cols=153 Identities=11% Similarity=0.097 Sum_probs=92.6
Q ss_pred eEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe-cCCHH---HHHHHHHHHHhhccCCcCccee-eccCCC---H---
Q 005248 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT-VQGKR---EADACFEIKNSLVQKNYNIPLV-ADIHFA---P--- 172 (706)
Q Consensus 104 I~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvt-v~~~~---~A~al~~I~~~L~~~g~~iPLV-ADIHF~---~--- 172 (706)
+.+++.+-....+.+..++ .++++|.+-|-+. ..... ....+.++++.|++.|..+..+ +...|. +
T Consensus 3 lg~~~~~~~~~~~~~~~l~---~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 79 (278)
T 1i60_A 3 LCFNEATTLENSNLKLDLE---LCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGH 79 (278)
T ss_dssp EEEEGGGGTTTCCHHHHHH---HHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHH
T ss_pred eEechhhcccCCCHHHHHH---HHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHH
Confidence 4566665333456665554 4567899999999 65432 1245677888888888876632 222232 2
Q ss_pred -------HHHH-HHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CCCC
Q 005248 173 -------SVAL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGS 242 (706)
Q Consensus 173 -------~~Al-~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~GS 242 (706)
+.++ .|.+. +..|++.||.... .++ +.+.++++.+.+.++.+.|+++|+ +|++ ||+.
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~--------~~~---~~~~~~~~~~~l~~l~~~a~~~gv--~l~lEn~~~ 146 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAVPLVTEQ--------KIV---KEEIKKSSVDVLTELSDIAEPYGV--KIALEFVGH 146 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECCBCSS--------CCC---HHHHHHHHHHHHHHHHHHHGGGTC--EEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCCCC--------CCC---HHHHHHHHHHHHHHHHHHHHhcCC--EEEEEecCC
Confidence 1122 23333 8889998886422 111 345567888899999999999997 5566 4432
Q ss_pred CchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecC
Q 005248 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKAS 284 (706)
Q Consensus 243 L~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaS 284 (706)
-.. +..+ .-+..+++++.|-.++-+-+=..
T Consensus 147 ~~~-----~~~~-------~~~~~~l~~~~~~~~~g~~~D~~ 176 (278)
T 1i60_A 147 PQC-----TVNT-------FEQAYEIVNTVNRDNVGLVLDSF 176 (278)
T ss_dssp TTB-----SSCS-------HHHHHHHHHHHCCTTEEEEEEHH
T ss_pred ccc-----hhcC-------HHHHHHHHHHhCCCCeeEEEEeE
Confidence 210 2233 34456777777777777766443
No 49
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=92.85 E-value=0.4 Score=45.41 Aligned_cols=111 Identities=17% Similarity=0.122 Sum_probs=81.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFA 193 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig 193 (706)
.|.+...+.+..+.++|++++-++.......+.++.+|+.+- -++++-++...++.-+..|.+. +|-| +.|+--
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~~- 93 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVEQCRKAVESGAEFI-VSPHLD- 93 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHHHHHHHHHHTCSEE-ECSSCC-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHHHHHHHHHcCCCEE-EcCCCC-
Confidence 467778888999999999999998777666667888887531 2467777665688888888886 9999 988721
Q ss_pred cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCC
Q 005248 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 273 (706)
Q Consensus 194 ~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~ 273 (706)
.++++.|+++|+|+=.|+ .|++ .++.+.+.|
T Consensus 94 ---------------------------~~~~~~~~~~g~~vi~g~--------------~t~~--------e~~~a~~~G 124 (205)
T 1wa3_A 94 ---------------------------EEISQFCKEKGVFYMPGV--------------MTPT--------ELVKAMKLG 124 (205)
T ss_dssp ---------------------------HHHHHHHHHHTCEEECEE--------------CSHH--------HHHHHHHTT
T ss_pred ---------------------------HHHHHHHHHcCCcEECCc--------------CCHH--------HHHHHHHcC
Confidence 237899999999986554 2332 244567889
Q ss_pred CCcEEE
Q 005248 274 FHNFLF 279 (706)
Q Consensus 274 f~~ivi 279 (706)
.+-|++
T Consensus 125 ad~vk~ 130 (205)
T 1wa3_A 125 HTILKL 130 (205)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 886543
No 50
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=92.72 E-value=3.2 Score=44.88 Aligned_cols=199 Identities=13% Similarity=0.166 Sum_probs=126.7
Q ss_pred eeEEEceeecCCCC-ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEec--------CC------------------
Q 005248 89 RTVMVGNVAIGSEH-PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV--------QG------------------ 141 (706)
Q Consensus 89 r~V~VG~v~IGG~~-PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv--------~~------------------ 141 (706)
-..+||+..||+++ |..|==+-...--|.+-..+=|...++|||+.||+-+ |+
T Consensus 14 ~~~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~ 93 (385)
T 1vli_A 14 AAFQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLV 93 (385)
T ss_dssp CEEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHG
T ss_pred hheeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHH
Confidence 35789999999985 5666667777788999999999999999999999842 21
Q ss_pred ------HHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHh
Q 005248 142 ------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQ 214 (706)
Q Consensus 142 ------~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~ 214 (706)
.+.-+.|.+.++. ..+|.++.. ||..-+....+. ++-+-|--+|+-+
T Consensus 94 ~~~~l~~e~~~~L~~~~~~-----~Gi~~~stp-fD~~svd~l~~~~vd~~KIgS~~~~N-------------------- 147 (385)
T 1vli_A 94 QSMEMPAEWILPLLDYCRE-----KQVIFLSTV-CDEGSADLLQSTSPSAFKIASYEINH-------------------- 147 (385)
T ss_dssp GGBSSCGGGHHHHHHHHHH-----TTCEEECBC-CSHHHHHHHHTTCCSCEEECGGGTTC--------------------
T ss_pred HhcCCCHHHHHHHHHHHHH-----cCCcEEEcc-CCHHHHHHHHhcCCCEEEECcccccC--------------------
Confidence 1333444444443 568888877 666666666677 9999999999965
Q ss_pred hHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEE-EecCChhH-----
Q 005248 215 HIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFS-MKASNPVV----- 288 (706)
Q Consensus 215 ~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS-~KaSnv~~----- 288 (706)
-+|++.+-+.|+||=+-+-- -|-+. ++.|+ +.+.+.|-.+|++= |= |.-+.
T Consensus 148 ------~pLL~~va~~gKPViLStGm------------aTl~E-i~~Av---e~i~~~Gn~~iiLlhc~-s~YPtp~~~~ 204 (385)
T 1vli_A 148 ------LPLLKYVARLNRPMIFSTAG------------AEISD-VHEAW---RTIRAEGNNQIAIMHCV-AKYPAPPEYS 204 (385)
T ss_dssp ------HHHHHHHHTTCSCEEEECTT------------CCHHH-HHHHH---HHHHTTTCCCEEEEEEC-SSSSCCGGGC
T ss_pred ------HHHHHHHHhcCCeEEEECCC------------CCHHH-HHHHH---HHHHHCCCCcEEEEecc-CCCCCChhhc
Confidence 35899999999999555422 22222 33444 45677888787772 32 22111
Q ss_pred HHHHHHHHHHhhhcCCC-CCcccccccccCCCCCCchhhHHHHHHHhhcCCCceeEEecCCCC
Q 005248 289 MVQAYRLLVAEMYVHGW-DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPP 350 (706)
Q Consensus 289 ~i~ayrlla~~~~~eg~-~YPLHLGVTEAG~g~~G~IKSavGiG~LL~dGIGDTIRVSLT~dP 350 (706)
-+.+-..|.++ + ++|. |..-=..|.-..-.-|+++|+ |-|-+-.|.|.
T Consensus 205 nL~aI~~Lk~~-----f~~lpV--G~SdHt~G~~~~~~AAvAlGA-------~iIEkHftldr 253 (385)
T 1vli_A 205 NLSVIPMLAAA-----FPEAVI--GFSDHSEHPTEAPCAAVRLGA-------KLIEKHFTIDK 253 (385)
T ss_dssp CTTHHHHHHHH-----STTSEE--EEEECCSSSSHHHHHHHHTTC-------SEEEEEBCSCT
T ss_pred CHHHHHHHHHH-----cCCCCE--EeCCCCCCchHHHHHHHHcCC-------CEEEeCCCccc
Confidence 13344445555 4 4443 664333333223334444443 46777766654
No 51
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=92.52 E-value=1.4 Score=46.29 Aligned_cols=144 Identities=22% Similarity=0.235 Sum_probs=90.7
Q ss_pred eEEEceeecCCCCc-eEEEeccCCCCCCHHHHHHHHHHHHHc----CCCEEEEe------------cCCHHHHHHHHHHH
Q 005248 90 TVMVGNVAIGSEHP-IRVQTMTTNDTKDVAGTVEEVMRIADQ----GADLVRIT------------VQGKREADACFEIK 152 (706)
Q Consensus 90 ~V~VG~v~IGG~~P-I~VQSMt~t~T~Dv~atv~Qi~~L~~a----GceiVRvt------------v~~~~~A~al~~I~ 152 (706)
.|.||++.+|++.| ++|==.+... |.+...+-.++|.++ |..+|+-. .++..-.+.|+.++
T Consensus 28 ~v~~~~i~~G~~~~l~vIaGPCsie--s~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~ 105 (298)
T 3fs2_A 28 TVKVGNVTFSNSAPLALIAGPCQME--TRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFS 105 (298)
T ss_dssp SEEETTEEECTTSCCEEEEECSBCC--CHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCHHHHHHHHH
T ss_pred eEEECCEEECCCCceEEEEeCCcCC--CHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHH
Confidence 69999999999965 5665555544 566666666666655 46656543 22222345555555
Q ss_pred HhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC
Q 005248 153 NSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232 (706)
Q Consensus 153 ~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~ 232 (706)
+..+ ...+|++.++|- +.-+...++.+|-+-|--+|+-+ .++++.+...++
T Consensus 106 ~~~~--e~GLpv~Tev~D-~~~v~~l~~~vd~lkIgA~~~~n--------------------------~~LLr~va~~gk 156 (298)
T 3fs2_A 106 DLKK--EYGFPVLTDIHT-EEQCAAVAPVVDVLQIPAFLCRQ--------------------------TDLLIAAARTGR 156 (298)
T ss_dssp HHHH--HHCCCEEEECCS-HHHHHHHTTTCSEEEECGGGTTC--------------------------HHHHHHHHHTTS
T ss_pred HHHH--hcCCeEEEEeCC-HHHHHHHHhhCCEEEECccccCC--------------------------HHHHHHHHccCC
Confidence 5433 367999999965 55555556779999998888843 236677778999
Q ss_pred eEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEE
Q 005248 233 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF 279 (706)
Q Consensus 233 ~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~ivi 279 (706)
|| ++--|- .-|++.|. .-++.+.+.|-++|++
T Consensus 157 PV--ilK~Gm---------s~t~~ei~----~ave~i~~~Gn~~iiL 188 (298)
T 3fs2_A 157 VV--NVKKGQ---------FLAPWDMK----NVLAKITESGNPNVLA 188 (298)
T ss_dssp EE--EEECCT---------TCCGGGHH----HHHHHHHTTTCCCEEE
T ss_pred cE--EEeCCC---------CCCHHHHH----HHHHHHHHcCCCeEEE
Confidence 98 443332 02555552 3344566777777776
No 52
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=92.45 E-value=0.73 Score=48.62 Aligned_cols=111 Identities=13% Similarity=0.118 Sum_probs=84.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-||.|=- | ..-|.+.+++-+++|++.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 191 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 261 (391)
T 2qgy_A 191 VGDELPLMLDL--A-VPEDLDQTKSFLKEVSSFNPYWIEEPVD-GENISLLTEIKNT-----FNMKVVTGEKQSGLVHFR 261 (391)
T ss_dssp HCSSSCEEEEC--C-CCSCHHHHHHHHHHHGGGCCSEEECSSC-TTCHHHHHHHHHH-----CSSCEEECTTCCSHHHHH
T ss_pred hCCCCEEEEEc--C-CCCCHHHHHHHHHHHHhcCCCeEeCCCC-hhhHHHHHHHHhh-----CCCCEEEcCCcCCHHHHH
Confidence 57778888721 2 2346788888899999999998753333 2457778888885 68999999654 577777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
.+++ .+|-|.|.|..+|.-. .+.++++.|+++|+++=+|..
T Consensus 262 ~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 262 ELISRNAADIFNPDISGMGGLI----------------------DIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHTTCCSEECCBTTTSSCHH----------------------HHHHHHHHHHHTTCEECCBCC
T ss_pred HHHHcCCCCEEEECcchhCCHH----------------------HHHHHHHHHHHCCCEEeccCC
Confidence 7775 4999999999998843 567899999999999877754
No 53
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=92.45 E-value=1.8 Score=41.18 Aligned_cols=90 Identities=18% Similarity=0.202 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceee--ccCCCHHHHHHHhhh-cCceeeCCCC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA--DIHFAPSVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVA--DIHF~~~~Al~a~~~-~~kiRINPGN 191 (706)
.|.+..+++++++.++|++.|=++..+....+.++++++. +++|++- ..-.++..+..|+++ ++.|-
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~-----~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~----- 85 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDA-----YGDKALIGAGTVLKPEQVDALARMGCQLIV----- 85 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHH-----HTTTSEEEEECCCSHHHHHHHHHTTCCEEE-----
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHh-----CCCCeEEEeccccCHHHHHHHHHcCCCEEE-----
Confidence 4667788889999999999999998888777888888774 5566543 223345556666665 77775
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
++... .++++.++++|.++-+|+
T Consensus 86 ~~~~~------------------------~~~~~~~~~~g~~~~~g~ 108 (212)
T 2v82_A 86 TPNIH------------------------SEVIRRAVGYGMTVCPGC 108 (212)
T ss_dssp CSSCC------------------------HHHHHHHHHTTCEEECEE
T ss_pred eCCCC------------------------HHHHHHHHHcCCCEEeec
Confidence 22211 236789999999887774
No 54
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=92.43 E-value=0.27 Score=53.89 Aligned_cols=60 Identities=23% Similarity=0.392 Sum_probs=49.9
Q ss_pred eEeccC---CCCcccccHHHHHHHHHHHh------CCCC-CCeEEEEcccccCcccc-ccCceeeeccCCCc
Q 005248 641 EYVSCP---SCGRTLFDLQEISAEIREKT------SHLP-GVSIAIMGCIVNGPGEM-ADADFGYVGGAPGK 701 (706)
Q Consensus 641 e~ISCP---sCGRTlfDLq~~~a~Ik~~t------~hLk-glkIAIMGCIVNGPGEm-adAD~GyvG~~~gk 701 (706)
..++|| .|.--.+|-+.++.+|.+++ ..|+ -+||+|=||. |+=|.. .-+|+|++|.-+..
T Consensus 173 nivaC~G~~~C~~a~~DT~~la~~L~~~l~~~~~~~~LP~KfKI~iSGCp-N~C~~~v~~aDIGiiG~~r~~ 243 (437)
T 3or1_A 173 TPESCLGISRCEFACYDTQLMCYQLTQDYQDELHRPAFPYKFKFKFDGCP-NGCVASMARSDFAVIGTWKDD 243 (437)
T ss_dssp CCEECCGGGSCSSCCSCHHHHHHHHHHHTHHHHHSCCSSSCBCEEEESST-TCTTCHHHHCSEEEEEEESSC
T ss_pred eeeccccccccCccccccchhhhhhHhhhhhccccccCCceeeEeecccc-ccccchhhhccccccccccCC
Confidence 588998 58888999999999998876 3566 7999999997 888886 78999999985443
No 55
>2akj_A Ferredoxin--nitrite reductase, chloroplast; X-RAY crystallography, heme, electron transport, oxidoreductase; HET: SRM; 2.80A {Spinacia oleracea} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1
Probab=92.26 E-value=0.13 Score=58.16 Aligned_cols=58 Identities=24% Similarity=0.559 Sum_probs=46.4
Q ss_pred ceEecc---CCCCcccccHHHHHHHHHHHhC---CCC-CCeEEEEcccccCccccccCceeeeccC
Q 005248 640 TEYVSC---PSCGRTLFDLQEISAEIREKTS---HLP-GVSIAIMGCIVNGPGEMADADFGYVGGA 698 (706)
Q Consensus 640 te~ISC---PsCGRTlfDLq~~~a~Ik~~t~---hLk-glkIAIMGCIVNGPGEmadAD~GyvG~~ 698 (706)
...++| |.|...++|-+..+..|.+++. +++ .+||+|=||. |+=|...-||+|++|..
T Consensus 482 r~i~aC~G~~~C~~a~~Dt~~~a~~l~~~l~~~~~lp~k~kI~vSGCp-n~Ca~~~iaDIGlvG~~ 546 (608)
T 2akj_A 482 KGLVACTGSQFCGQAIIETKARALKVTEEVQRLVSVTRPVRMHWTGCP-NSCGQVQVADIGFMGCM 546 (608)
T ss_dssp TEEEECCGGGTCTTCSSCCHHHHHHHHHHHHHHEECSSCCEEEEESST-TCTTCGGGSSEEEEEEE
T ss_pred cceeeCCCCCCCCchhhhHHHHHHHHHHHHHHhcCCCcceEEEEeCCC-CccccccccceEEEEEe
Confidence 478999 5899999997665555544432 466 8999999997 99999999999999973
No 56
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=92.16 E-value=2.3 Score=44.50 Aligned_cols=163 Identities=12% Similarity=0.083 Sum_probs=98.2
Q ss_pred CCCHHHHHHHHH-HHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccC-Cc-CcceeeccCCCHHHHHHHhhh-cCceee
Q 005248 114 TKDVAGTVEEVM-RIADQGADLVRITVQG--KREADACFEIKNSLVQK-NY-NIPLVADIHFAPSVALRVAEC-FDKIRV 187 (706)
Q Consensus 114 T~Dv~atv~Qi~-~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~-g~-~iPLVADIHF~~~~Al~a~~~-~~kiRI 187 (706)
+..++.-++=+. +|.++|.+.+=+..|. +++-+.++.|++..... +. ++++.+...-. +-...|+++ ++.|||
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~-~~i~~a~~~g~~~v~i 115 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGN-KTVDWIKDSGAKVLNL 115 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTT-HHHHHHHHHTCCEEEE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccch-hhHHHHHHCCCCEEEE
Confidence 456788888888 9999999999998764 56778888888731100 12 35666665543 344455665 888887
Q ss_pred C-CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHH
Q 005248 188 N-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFA 266 (706)
Q Consensus 188 N-PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~ 266 (706)
- +-+=....+.|. ...+..-+++.++++.||++|..++++. ++ .-. ....=.+-.++.+
T Consensus 116 ~~~~s~~~~~~~~~----------~s~~e~l~~~~~~v~~ak~~G~~v~~~~-----~~-~~~----~~~~~~~~~~~~~ 175 (337)
T 3ble_A 116 LTKGSLHHLEKQLG----------KTPKEFFTDVSFVIEYAIKSGLKINVYL-----ED-WSN----GFRNSPDYVKSLV 175 (337)
T ss_dssp EEECSHHHHHHHTC----------CCHHHHHHHHHHHHHHHHHTTCEEEEEE-----ET-HHH----HHHHCHHHHHHHH
T ss_pred EEecCHHHHHHHhC----------CCHHHHHHHHHHHHHHHHHCCCEEEEEE-----EE-CCC----CCcCCHHHHHHHH
Confidence 2 111000000011 1122334567779999999999999764 22 000 0111134556788
Q ss_pred HHHHHCCCCcEEEEEecC----ChhHHHHHHHHHHHh
Q 005248 267 RICRKLDFHNFLFSMKAS----NPVVMVQAYRLLVAE 299 (706)
Q Consensus 267 ~i~e~~~f~~iviS~KaS----nv~~~i~ayrlla~~ 299 (706)
+.+++.|-+. |+++-+ .|..+-+-.+.|.++
T Consensus 176 ~~~~~~Ga~~--i~l~DT~G~~~P~~v~~lv~~l~~~ 210 (337)
T 3ble_A 176 EHLSKEHIER--IFLPDTLGVLSPEETFQGVDSLIQK 210 (337)
T ss_dssp HHHHTSCCSE--EEEECTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCE--EEEecCCCCcCHHHHHHHHHHHHHh
Confidence 8899999874 566644 455555555555555
No 57
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.00 E-value=1.7 Score=43.28 Aligned_cols=122 Identities=13% Similarity=0.134 Sum_probs=86.2
Q ss_pred eEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeec---------cCCCH--
Q 005248 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVAD---------IHFAP-- 172 (706)
Q Consensus 104 I~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVAD---------IHF~~-- 172 (706)
|++|.-...+-++.+--++......++|+.-+|+. + -+.+++||+. +++|+++. +.-++
T Consensus 22 vscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~--~---~~~i~~ir~~-----v~~Pvig~~k~d~~~~~~~I~~~~ 91 (232)
T 3igs_A 22 VSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE--G---IDNLRMTRSL-----VSVPIIGIIKRDLDESPVRITPFL 91 (232)
T ss_dssp EECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE--S---HHHHHHHHTT-----CCSCEEEECBCCCSSCCCCBSCSH
T ss_pred EEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC--C---HHHHHHHHHh-----cCCCEEEEEeecCCCcceEeCccH
Confidence 56688888888899999999999999999999984 3 4578888874 88999862 33333
Q ss_pred HHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhh
Q 005248 173 SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251 (706)
Q Consensus 173 ~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~ry 251 (706)
.-+.++.+. +|.|=++=....+++ .+.++++.++++|+.+=..+.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~p~----------------------~l~~~i~~~~~~g~~v~~~v~------------ 137 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTARQRPV----------------------AVEALLARIHHHHLLTMADCS------------ 137 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSS----------------------CHHHHHHHHHHTTCEEEEECC------------
T ss_pred HHHHHHHHcCCCEEEECccccCCHH----------------------HHHHHHHHHHHCCCEEEEeCC------------
Confidence 235566665 888765544332221 456799999999887743332
Q ss_pred CCChHHHHHHHHHHHHHHHHCCCCcEEE
Q 005248 252 GDSPRGMVESAFEFARICRKLDFHNFLF 279 (706)
Q Consensus 252 gdt~eamVeSAle~~~i~e~~~f~~ivi 279 (706)
..++++.+++.|++-|.+
T Consensus 138 ----------t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 138 ----------SVDDGLACQRLGADIIGT 155 (232)
T ss_dssp ----------SHHHHHHHHHTTCSEEEC
T ss_pred ----------CHHHHHHHHhCCCCEEEE
Confidence 135667788889886643
No 58
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=91.96 E-value=0.77 Score=47.29 Aligned_cols=146 Identities=16% Similarity=0.209 Sum_probs=90.6
Q ss_pred eEEEceeecCCCCce-EEEeccCCCCCCHHHHHHHHHHHHHcC----CC-EEEE-------ecCC-HH---HHHHHHHHH
Q 005248 90 TVMVGNVAIGSEHPI-RVQTMTTNDTKDVAGTVEEVMRIADQG----AD-LVRI-------TVQG-KR---EADACFEIK 152 (706)
Q Consensus 90 ~V~VG~v~IGG~~PI-~VQSMt~t~T~Dv~atv~Qi~~L~~aG----ce-iVRv-------tv~~-~~---~A~al~~I~ 152 (706)
.|.+|++.+|+++|+ +|=. ...-.|.+...+-+++|.++| .. +.|. |.+. .+ --+.++.++
T Consensus 2 ~i~i~~~~iG~~~~~~vIAG--pc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~~~~g~~l~~gl~~l~ 79 (280)
T 2qkf_A 2 DIKINDITLGNNSPFVLFGG--INVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFE 79 (280)
T ss_dssp CEEETTEEESTTSCCEEEEE--EEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHH
T ss_pred ceEeCCEEECCCCceEEEEe--cCCCCCHHHHHHHHHHHHHhhhhcceeEEEeeeeecCCCCChHHhhccchHHHHHHHH
Confidence 478999999999854 5553 335568999999999998876 44 3331 2221 11 133344444
Q ss_pred HhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC
Q 005248 153 NSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232 (706)
Q Consensus 153 ~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~ 232 (706)
+..+ ...+|++.++|-...+. ..++.++-+-|--+|+-+ .++++.+...|+
T Consensus 80 ~~~~--~~Gl~~~te~~d~~~~~-~l~~~~d~~kIga~~~~n--------------------------~~ll~~~a~~~k 130 (280)
T 2qkf_A 80 KVKA--EFGIPVITDVHEPHQCQ-PVAEVCDVIQLPAFLARQ--------------------------TDLVVAMAKTGN 130 (280)
T ss_dssp HHHH--HHCCCEEEECCSGGGHH-HHHHHCSEEEECGGGTTB--------------------------HHHHHHHHHTCC
T ss_pred HHHH--HcCCcEEEecCCHHHHH-HHHhhCCEEEECcccccC--------------------------HHHHHHHHcCCC
Confidence 4222 36799999998654443 445668888888777743 237777778999
Q ss_pred eEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 233 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 233 ~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~ 281 (706)
||=+=..-. -+++.|..+ +++++..|=.++++=.
T Consensus 131 PV~lk~G~~-----------~t~~e~~~A----~~~i~~~Gn~~i~L~~ 164 (280)
T 2qkf_A 131 VVNIKKPQF-----------LSPSQMKNI----VEKFHEAGNGKLILCE 164 (280)
T ss_dssp EEEEECCTT-----------SCGGGHHHH----HHHHHHTTCCCEEEEE
T ss_pred cEEEECCCC-----------CCHHHHHHH----HHHHHHcCCCeEEEEE
Confidence 994433221 134444333 4567777877776644
No 59
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=91.77 E-value=0.59 Score=48.80 Aligned_cols=112 Identities=8% Similarity=0.104 Sum_probs=82.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-C-HHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-A-PSVA 175 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~-~~~A 175 (706)
+|.+-||.|=- | ..-|.+.+++-+++|++.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ + +.-+
T Consensus 197 ~g~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 267 (382)
T 1rvk_A 197 VGPDIRLMIDA--F-HWYSRTDALALGRGLEKLGFDWIEEPMD-EQSLSSYKWLSDN-----LDIPVVGPESAAGKHWHR 267 (382)
T ss_dssp HCTTSEEEEEC--C-TTCCHHHHHHHHHHHHTTTCSEEECCSC-TTCHHHHHHHHHH-----CSSCEEECSSCSSHHHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEeCCCC-hhhHHHHHHHHhh-----CCCCEEEeCCccCcHHHH
Confidence 56677777621 2 2335677777888888888887643333 2456777888875 68999999765 4 5667
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
..+++ .+|-|.|.|+.+|.-. .+.++++.|+++|+++=+| +.+
T Consensus 268 ~~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~-~~~ 312 (382)
T 1rvk_A 268 AEWIKAGACDILRTGVNDVGGIT----------------------PALKTMHLAEAFGMECEVH-GNT 312 (382)
T ss_dssp HHHHHTTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHTTCCEEEC-CCS
T ss_pred HHHHHcCCCCEEeeCchhcCCHH----------------------HHHHHHHHHHHcCCeEeec-CCC
Confidence 77765 4999999999998743 5678999999999999888 443
No 60
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=91.43 E-value=0.79 Score=46.15 Aligned_cols=118 Identities=19% Similarity=0.204 Sum_probs=74.0
Q ss_pred CCCCceEEEeccCCCC--CCHHHHHHHHHHHHHcCCCEEEEecCC----------HH--HHHHHHHHHHhhccCCcCcce
Q 005248 99 GSEHPIRVQTMTTNDT--KDVAGTVEEVMRIADQGADLVRITVQG----------KR--EADACFEIKNSLVQKNYNIPL 164 (706)
Q Consensus 99 GG~~PI~VQSMt~t~T--~Dv~atv~Qi~~L~~aGceiVRvtv~~----------~~--~A~al~~I~~~L~~~g~~iPL 164 (706)
+...||-||+.|-.+. .|.+ +.+.+++++|++-|=+...+ .+ ..+.+.++++.|++.|..+..
T Consensus 18 ~~~~~~g~~~~s~~~~~~~~l~---~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~ 94 (305)
T 3obe_A 18 TAGKKMGLQTYSLGQELLQDMP---NGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISS 94 (305)
T ss_dssp CCCCCCEEEGGGGTHHHHTTHH---HHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEE
T ss_pred ccCCceEEEEEEchhhhhcCHH---HHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEE
Confidence 3456788888877653 3444 45566778899999888641 11 011456777778888887654
Q ss_pred eeccCCCH-----------------HHHHHHh-hh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHH
Q 005248 165 VADIHFAP-----------------SVALRVA-EC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVE 225 (706)
Q Consensus 165 VADIHF~~-----------------~~Al~a~-~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~ 225 (706)
+ |+.+ +.+++.+ +. +..|++ ||.- .. .+ .++++++.+.+.++.+
T Consensus 95 ~---~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~-~~~~---~~------~~----~~~~~~~~~~l~~l~~ 157 (305)
T 3obe_A 95 S---HLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQ-PSLP---RI------EN----EDDAKVVSEIFNRAGE 157 (305)
T ss_dssp E---BCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEE-CCCC---CC------SS----HHHHHHHHHHHHHHHH
T ss_pred e---eccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEe-CCCC---CC------CC----HHHHHHHHHHHHHHHH
Confidence 4 4332 1122223 33 888998 6531 10 12 2456788889999999
Q ss_pred HHHHcCCeEEEec
Q 005248 226 KCKKYGRAVRIGT 238 (706)
Q Consensus 226 ~ake~~~~IRIGv 238 (706)
.|+++|+ +|++
T Consensus 158 ~a~~~Gv--~l~l 168 (305)
T 3obe_A 158 ITKKAGI--LWGY 168 (305)
T ss_dssp HHHTTTC--EEEE
T ss_pred HHHHcCC--EEEE
Confidence 9999997 4565
No 61
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=91.25 E-value=1.2 Score=46.92 Aligned_cols=114 Identities=18% Similarity=0.228 Sum_probs=82.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.+++|=- |. .-|.+.+++-+++|++.|.+.+==-++. .+.+.+.+++++ +++|+++|=. +++.-+.
T Consensus 191 ~g~~~~l~vDa--n~-~~~~~~A~~~~~~l~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 261 (383)
T 3i4k_A 191 VGDRVSLRIDI--NA-RWDRRTALHYLPILAEAGVELFEQPTPA-DDLETLREITRR-----TNVSVMADESVWTPAEAL 261 (383)
T ss_dssp TTTTSEEEEEC--TT-CSCHHHHHHHHHHHHHTTCCEEESCSCT-TCHHHHHHHHHH-----HCCEEEESTTCSSHHHHH
T ss_pred cCCCCEEEEEC--CC-CCCHHHHHHHHHHHHhcCCCEEECCCCh-hhHHHHHHHHhh-----CCCCEEecCccCCHHHHH
Confidence 56677787742 22 2356777777888888898877533332 346677788875 6899999965 4566666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GS 242 (706)
.+++ .+|-|.|.|+..|.-. ....+...|+++|+++=+|-+++|
T Consensus 262 ~~i~~~~~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~~~~~es 307 (383)
T 3i4k_A 262 AVVKAQAADVIALKTTKHGGLL----------------------ESKKIAAIAEAGGLACHGATSLEG 307 (383)
T ss_dssp HHHHHTCCSEEEECTTTTTSHH----------------------HHHHHHHHHHHTTCEEEECCSCCC
T ss_pred HHHHcCCCCEEEEcccccCCHH----------------------HHHHHHHHHHHcCCeEEeCCCCcc
Confidence 6665 4999999999998843 567899999999999977765433
No 62
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=91.21 E-value=0.55 Score=49.83 Aligned_cols=113 Identities=10% Similarity=0.033 Sum_probs=85.4
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHH
Q 005248 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVA 175 (706)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~A 175 (706)
.+|.+.||+|= .|..-.|.+.+++-+++|++.|.+.+==-++ .++.+.+.+|+++ +++|+++|=.+. +.-+
T Consensus 196 a~G~d~~l~vD--an~~~~~~~~A~~~~~~L~~~~i~~iEeP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 267 (394)
T 3mqt_A 196 VIGWDMDMMVD--CLYRWTDWQKARWTFRQLEDIDLYFIEACLQ-HDDLIGHQKLAAA-----INTRLCGAEMSTTRFEA 267 (394)
T ss_dssp HHCSSSEEEEE--CTTCCSCHHHHHHHHHHTGGGCCSEEESCSC-TTCHHHHHHHHHH-----SSSEEEECTTCCHHHHH
T ss_pred HhCCCCeEEEE--CCCCCCCHHHHHHHHHHHhhcCCeEEECCCC-cccHHHHHHHHhh-----CCCCEEeCCCcCCHHHH
Confidence 35778888883 3433337888889999999999988864444 2346677888885 789999996654 6666
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
..+++ ++|-|.|.|+..|.-. ....+...|+++|+++=+|..
T Consensus 268 ~~~l~~~~~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 268 QEWLEKTGISVVQSDYNRCGGVT----------------------ELLRIMDICEHHNAQLMPHNW 311 (394)
T ss_dssp HHHHHHHCCSEECCCTTTSSCHH----------------------HHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHcCCCCeEecCccccCCHH----------------------HHHHHHHHHHHcCCEEeccCC
Confidence 66665 4999999999998843 567899999999999866553
No 63
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=91.16 E-value=0.57 Score=49.80 Aligned_cols=113 Identities=9% Similarity=-0.016 Sum_probs=85.3
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHH
Q 005248 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (706)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (706)
.+|.+.||+|= .|..-.|.+.+++-+++|++.|.+.+==-++ .++.+.+.+|+++ +++|+++|=.+ ++.-+
T Consensus 201 a~G~d~~l~vD--aN~~~~~~~~A~~~~~~L~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 272 (394)
T 3mkc_A 201 ILGHDTDMMVD--YLYRFTDWYEVARLLNSIEDLELYFAEATLQ-HDDLSGHAKLVEN-----TRSRICGAEMSTTRFEA 272 (394)
T ss_dssp HHCSSSEEEEE--CTTCCCCHHHHHHHHHHTGGGCCSEEESCSC-TTCHHHHHHHHHH-----CSSCBEECTTCCHHHHH
T ss_pred HhCCCCeEEEe--CCCCCCCHHHHHHHHHHhhhcCCeEEECCCC-chhHHHHHHHHhh-----CCCCEEeCCCCCCHHHH
Confidence 35778888873 2433337888899999999999988764444 2356778888885 78999999664 46666
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
..+++ ++|-|.|.|+..|.-. ....+...|+++|+++=+|..
T Consensus 273 ~~~l~~~~~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h~~ 316 (394)
T 3mkc_A 273 EEWITKGKVHLLQSDYNRCGGLT----------------------ELRRITEMATANNVQVMPHNW 316 (394)
T ss_dssp HHHHHTTCCSEECCCTTTTTHHH----------------------HHHHHHHHHHHTTCEECCCCC
T ss_pred HHHHHcCCCCeEecCccccCCHH----------------------HHHHHHHHHHHcCCEEeecCC
Confidence 67765 4999999999998733 567899999999999866543
No 64
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=91.06 E-value=2.9 Score=46.78 Aligned_cols=207 Identities=14% Similarity=0.193 Sum_probs=126.7
Q ss_pred eEEEceeecCCCCceEEEeccCCCCCC---HHHHHHHHHHHHHcCCCEEEEe---c-------C------CHHHHHHHHH
Q 005248 90 TVMVGNVAIGSEHPIRVQTMTTNDTKD---VAGTVEEVMRIADQGADLVRIT---V-------Q------GKREADACFE 150 (706)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~D---v~atv~Qi~~L~~aGceiVRvt---v-------~------~~~~A~al~~ 150 (706)
.+++|++.+ .|+|+.-.|+...+.+ .+..++--.+.++-|+-++=.- + | +.+..+.+++
T Consensus 8 p~~ig~~~l--~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 85 (671)
T 1ps9_A 8 PLDLGFTTL--KNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRT 85 (671)
T ss_dssp CEECSSCEE--SSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHH
T ss_pred CeeECCEEE--cCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHH
Confidence 477888877 6999999998733321 4556677777888788776221 1 1 3466788888
Q ss_pred HHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHc
Q 005248 151 IKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY 230 (706)
Q Consensus 151 I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~ 230 (706)
+.+...+.|. |+++=++-..+.+.. .--+-|-.+-.....+...++|.+ |++.+-+.|..-.+.|++.
T Consensus 86 ~~~~vh~~g~--~i~~Ql~h~Gr~~~~------~~~~~ps~~~~~~~~~~p~~~t~~----ei~~~i~~~~~aA~~a~~a 153 (671)
T 1ps9_A 86 ITEAVHQEGG--KIALQILHTGRYSYQ------PHLVAPSALQAPINRFVPHELSHE----EILQLIDNFARCAQLAREA 153 (671)
T ss_dssp HHHHHHHTTC--CEEEEECCCGGGSBS------TTCEESSSCCCTTCSSCCEECCHH----HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCC--EEEEEeccCCcccCC------CCCcCCCCcccccCCCCCccCCHH----HHHHHHHHHHHHHHHHHHc
Confidence 8887777775 666666555444310 001223333221112344556654 5777888888888888888
Q ss_pred C-CeEEEecCCCCCchhHH--------HhhCCChHHHHHHHHHHHHHHHH-CCCCcEEEEEecC--Ch---hHHHHHHHH
Q 005248 231 G-RAVRIGTNHGSLSDRIM--------SYYGDSPRGMVESAFEFARICRK-LDFHNFLFSMKAS--NP---VVMVQAYRL 295 (706)
Q Consensus 231 ~-~~IRIGvN~GSL~~~il--------~rygdt~eamVeSAle~~~i~e~-~~f~~iviS~KaS--nv---~~~i~ayrl 295 (706)
| -.|.|=.-||-|=+.++ .+||.+.+.=..-++|-++-.++ .| .++.|++|-| +. -...+-+..
T Consensus 154 Gfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG-~~~~v~vrls~~~~~~~g~~~~~~~~ 232 (671)
T 1ps9_A 154 GYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVG-NDFIIIYRLSMLDLVEDGGTFAETVE 232 (671)
T ss_dssp TCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC-SSSEEEEEEEEECCSTTCCCHHHHHH
T ss_pred CCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcC-CCceEEEEECccccCCCCCCHHHHHH
Confidence 7 46777666887655444 34776555555556666665444 33 3556777766 11 112334556
Q ss_pred HHHhhhcCCCCCccccc
Q 005248 296 LVAEMYVHGWDYPLHLG 312 (706)
Q Consensus 296 la~~~~~eg~~YPLHLG 312 (706)
+++++++.|.|| ||++
T Consensus 233 ~a~~l~~~g~d~-i~v~ 248 (671)
T 1ps9_A 233 LAQAIEAAGATI-INTG 248 (671)
T ss_dssp HHHHHHHHTCSE-EEEE
T ss_pred HHHHHHhcCCCE-EEcC
Confidence 677777788998 6764
No 65
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=90.97 E-value=0.89 Score=44.24 Aligned_cols=151 Identities=15% Similarity=0.116 Sum_probs=90.8
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceee----ccC-------CCH-
Q 005248 105 RVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA----DIH-------FAP- 172 (706)
Q Consensus 105 ~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVA----DIH-------F~~- 172 (706)
.++||+-.+ .|++. .+..++++|.+-|=+..|...+ ++++++.|++.|..+..+. |+. .++
T Consensus 14 ~~~~~~f~~-~~~~~---~l~~~~~~G~~~vEl~~~~~~~---~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
T 3ngf_A 14 ANLSTMFNE-VPFLE---RFRLAAEAGFGGVEFLFPYDFD---ADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISG 86 (269)
T ss_dssp EETTTSCTT-SCHHH---HHHHHHHTTCSEEECSCCTTSC---HHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTT
T ss_pred eechhhhcc-CCHHH---HHHHHHHcCCCEEEecCCccCC---HHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCcc
Confidence 345555543 46655 4556777899999998887554 5677777778888776543 221 122
Q ss_pred ---------HHHHHHh-hh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CC
Q 005248 173 ---------SVALRVA-EC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NH 240 (706)
Q Consensus 173 ---------~~Al~a~-~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~ 240 (706)
+.+++.+ +. +..|++.|| .... ..+.+.++++.+.+.++.+.|+++|+.+=|=. |+
T Consensus 87 ~r~~~~~~~~~~i~~A~~lGa~~v~~~~g-~~~~-----------~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~ 154 (269)
T 3ngf_A 87 REQEFRDNVDIALHYALALDCRTLHAMSG-ITEG-----------LDRKACEETFIENFRYAADKLAPHGITVLVEPLNT 154 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEECCBC-BCTT-----------SCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEccC-CCCC-----------CCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCc
Confidence 1122333 33 888999999 3221 12455677888899999999999997553332 42
Q ss_pred CCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCC
Q 005248 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (706)
Q Consensus 241 GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSn 285 (706)
-. .|..++.+.-+..+++++.|-.++.+-+=..+
T Consensus 155 ~~-----------~~~~~~~~~~~~~~l~~~v~~~~vg~~~D~~h 188 (269)
T 3ngf_A 155 RN-----------MPGYFIVHQLEAVGLVKRVNRPNVAVQLDLYH 188 (269)
T ss_dssp TT-----------STTBSCCCHHHHHHHHHHHCCTTEEEEEEHHH
T ss_pred cc-----------CccchhcCHHHHHHHHHHhCCCCCCeEEEhhh
Confidence 10 00011222334556777777777777665444
No 66
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=90.97 E-value=1.6 Score=43.56 Aligned_cols=162 Identities=8% Similarity=-0.016 Sum_probs=93.0
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH-------HHHHHHHHHHhhccCCcCcceee----cc--
Q 005248 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR-------EADACFEIKNSLVQKNYNIPLVA----DI-- 168 (706)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~-------~A~al~~I~~~L~~~g~~iPLVA----DI-- 168 (706)
..+.+++.+-+....- ..-..+..++++|++-|=+...... ..+.++++++.|.+.|+.++.+. +.
T Consensus 20 ~~lgi~~~~~~~~~~~-~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~~ 98 (316)
T 3qxb_A 20 MKLGVNLCFAVKRWLE-PDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTY 98 (316)
T ss_dssp CCEEEEGGGGTTTSCS-HHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTS
T ss_pred ccceecchHHHhccCC-HHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEeecccccccc
Confidence 3466777654443221 1122334557999999999875432 23467888888999998877542 21
Q ss_pred ----CCCHH----------HHHHHh-hh-cCceeeCCCCCCcchhhccccccch-HHHHHHHhhHHhhHHHHHHHHHHcC
Q 005248 169 ----HFAPS----------VALRVA-EC-FDKIRVNPGNFADRRAQFEQLEYTD-DEYQKELQHIEEVFSPLVEKCKKYG 231 (706)
Q Consensus 169 ----HF~~~----------~Al~a~-~~-~~kiRINPGNig~~~k~F~~~~Ytd-eeY~~El~~I~~~f~~vv~~ake~~ 231 (706)
+-++. .+++.+ +. +..|.+.+|.+..+. |++ ...++.++++.+.+.++.+.|+++|
T Consensus 99 ~~l~~~d~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~-------~~~~~~~~~~~~~~~~~l~~l~~~a~~~G 171 (316)
T 3qxb_A 99 NHFLAPTLELQSLGYQHLKRAIDMTAAMEVPATGMPFGSYSAAD-------ALNPARREEIYAIARDMWIELAAYAKRQG 171 (316)
T ss_dssp CBTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHH-------HTCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCcCccc-------cCCcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 22332 122222 33 777877777543211 222 2356778899999999999999999
Q ss_pred CeEEEec-C--CCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEec
Q 005248 232 RAVRIGT-N--HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKA 283 (706)
Q Consensus 232 ~~IRIGv-N--~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~Ka 283 (706)
+. .|++ | ++. .++.|++. +.+.++.+++.|-.++-+-+=.
T Consensus 172 v~-~l~lE~~~~~~-------~~~~t~~~----~~~l~~~v~~~~~~~vg~~lD~ 214 (316)
T 3qxb_A 172 LS-MLYVEPVPLAT-------EFPSSAAD----AARLMADLDGRTEIPVRLLVDW 214 (316)
T ss_dssp CC-EEEECCCSCTT-------BSSCSHHH----HHHHHHHHTTTSSSCEEEEEEH
T ss_pred Ce-EEEEEecCCcc-------ccCCCHHH----HHHHHHHHhccCCCCEEEEEEc
Confidence 75 1454 2 221 23455433 3334444433265666665543
No 67
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=90.74 E-value=2.8 Score=42.75 Aligned_cols=160 Identities=10% Similarity=0.090 Sum_probs=95.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec-------CCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCcee
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITV-------QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIR 186 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv-------~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiR 186 (706)
..++.-++=+.+|.++|.+.+=++. |-+.+.+ ++.+.+.+. -++++.+.. -|.+-+..|+++ ++.||
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~---~~~~~~~~~-~~~~~~~l~-~~~~~i~~a~~ag~~~v~ 98 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHT---EVLKGIQKF-PGINYPVLT-PNLKGFEAAVAAGAKEVV 98 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHH---HHHHHSCCC-TTCBCCEEC-CSHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHH---HHHHHHhhC-CCCEEEEEc-CCHHhHHHHHHCCCCEEE
Confidence 5678888889999999999999985 4333333 233444432 245555555 466667777776 99999
Q ss_pred eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC-CCCchhHHHhhCC-ChHHHHHHHHH
Q 005248 187 VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH-GSLSDRIMSYYGD-SPRGMVESAFE 264 (706)
Q Consensus 187 INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~-GSL~~~il~rygd-t~eamVeSAle 264 (706)
|- ......|.. .-+..-.+..-+++.+.++.||++|..+++.+-- -|-++ -|. ++ +-.++
T Consensus 99 i~----~~~sd~~~~-----~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~-----~~~~~~----~~~~~ 160 (298)
T 2cw6_A 99 IF----GAASELFTK-----KNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPY-----EGKISP----AKVAE 160 (298)
T ss_dssp EE----EESCHHHHH-----HHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTT-----TBSCCH----HHHHH
T ss_pred EE----ecCCHHHHH-----HHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCc-----CCCCCH----HHHHH
Confidence 72 111100100 0011123344456777999999999999976531 11111 022 33 45667
Q ss_pred HHHHHHHCCCCcEEEEEe----cCChhHHHHHHHHHHHh
Q 005248 265 FARICRKLDFHNFLFSMK----ASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 265 ~~~i~e~~~f~~iviS~K----aSnv~~~i~ayrlla~~ 299 (706)
.++.+++.|-+.| +++ ..+|..+-+-.+.|.++
T Consensus 161 ~~~~~~~~Ga~~i--~l~DT~G~~~P~~~~~lv~~l~~~ 197 (298)
T 2cw6_A 161 VTKKFYSMGCYEI--SLGDTIGVGTPGIMKDMLSAVMQE 197 (298)
T ss_dssp HHHHHHHTTCSEE--EEEETTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEE--EecCCCCCcCHHHHHHHHHHHHHh
Confidence 7888899999854 555 34555555555555554
No 68
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=90.62 E-value=3.3 Score=41.09 Aligned_cols=122 Identities=14% Similarity=0.149 Sum_probs=85.5
Q ss_pred eEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeecc---------CCCH--
Q 005248 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI---------HFAP-- 172 (706)
Q Consensus 104 I~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADI---------HF~~-- 172 (706)
|++|.-...+-++.+--++......++|+.-+|+. + -+.+++||+. +++|+++.. .-++
T Consensus 22 vscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~--~---~~~i~~ir~~-----v~~Pvig~~k~~~~~~~~~I~~~~ 91 (229)
T 3q58_A 22 VSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIE--G---IENLRTVRPH-----LSVPIIGIIKRDLTGSPVRITPYL 91 (229)
T ss_dssp EECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEE--S---HHHHHHHGGG-----CCSCEEEECBCCCSSCCCCBSCSH
T ss_pred EEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEEC--C---HHHHHHHHHh-----cCCCEEEEEeecCCCCceEeCccH
Confidence 56688888888999999999999999999999984 3 4568888875 889988532 2233
Q ss_pred HHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhh
Q 005248 173 SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251 (706)
Q Consensus 173 ~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~ry 251 (706)
+-+.++.+. +|.|=++=....+++ .+.++++.++++|..+=..+.
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~~p~----------------------~l~~~i~~~~~~g~~v~~~v~------------ 137 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRSRPV----------------------DIDSLLTRIRLHGLLAMADCS------------ 137 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSS----------------------CHHHHHHHHHHTTCEEEEECS------------
T ss_pred HHHHHHHHcCCCEEEECccccCChH----------------------HHHHHHHHHHHCCCEEEEecC------------
Confidence 235556665 887755444322211 456799999999887743331
Q ss_pred CCChHHHHHHHHHHHHHHHHCCCCcEEE
Q 005248 252 GDSPRGMVESAFEFARICRKLDFHNFLF 279 (706)
Q Consensus 252 gdt~eamVeSAle~~~i~e~~~f~~ivi 279 (706)
..+.++.+++.|++-|.+
T Consensus 138 ----------t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 138 ----------TVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp ----------SHHHHHHHHHTTCSEEEC
T ss_pred ----------CHHHHHHHHhCCCCEEEe
Confidence 245667788899886653
No 69
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=90.47 E-value=1.7 Score=43.75 Aligned_cols=163 Identities=7% Similarity=0.081 Sum_probs=92.8
Q ss_pred ceEEEeccCCC---CCCHH---HHHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHhhccCCcC---cceeec
Q 005248 103 PIRVQTMTTND---TKDVA---GTVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYN---IPLVAD 167 (706)
Q Consensus 103 PI~VQSMt~t~---T~Dv~---atv~Qi~~L~~aGceiVRvtv~~~~------~A~al~~I~~~L~~~g~~---iPLVAD 167 (706)
.|-+++++-++ ..+.+ ..++.+..++++|.+-|=+...+.. ....+.++++.|.+.|.. +.-+
T Consensus 10 klg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~-- 87 (335)
T 2qw5_A 10 DIYISFFMFTTNLQPDNLDYRRIVVAHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTN-- 87 (335)
T ss_dssp CEEEEGGGTCSCCCTTCHHHHHHHHHHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEE--
T ss_pred ceeEEEeeecCCCChhhhhccchHHHHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEE--
Confidence 35666665332 12333 3346677888999999999876431 126678888888888888 6654
Q ss_pred cCC---------CHH----------HHHHHh-hh-cCceeeCCCCCCcchhhcccc-----ccch---HHHHHHHhhHHh
Q 005248 168 IHF---------APS----------VALRVA-EC-FDKIRVNPGNFADRRAQFEQL-----EYTD---DEYQKELQHIEE 218 (706)
Q Consensus 168 IHF---------~~~----------~Al~a~-~~-~~kiRINPGNig~~~k~F~~~-----~Ytd---eeY~~El~~I~~ 218 (706)
.|| ++. .+++.+ +. +..| +.|+.-+.+. |... .+++ .-..+.++++.+
T Consensus 88 ~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (335)
T 2qw5_A 88 VGATRTFDPSSNYPEQRQEALEYLKSRVDITAALGGEIM-MGPIVIPYGV--FPTTDFNEPIWSDELQEHLKVRYANAQP 164 (335)
T ss_dssp CCCCSSSCTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEE-EECCSSCTTC--CCBCTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred eccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE-eccccCcccc--ccCCcccccccccchhhhHHHHHHHHHH
Confidence 233 221 111222 22 6666 6665311111 1000 0010 015677788899
Q ss_pred hHHHHHHHHHHcCCeEEEec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEec
Q 005248 219 VFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKA 283 (706)
Q Consensus 219 ~f~~vv~~ake~~~~IRIGv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~Ka 283 (706)
.+.++.+.|+++|+ ++++ |++..+. .++.+.-+..+++++.|-.++-+-+=.
T Consensus 165 ~l~~l~~~a~~~Gv--~l~lE~~~~~~~-----------~~~~t~~~~~~ll~~v~~~~vgl~~D~ 217 (335)
T 2qw5_A 165 ILDKLGEYAEIKKV--KLAIEPITHWET-----------PGPNKLSQLIEFLKGVKSKQVGVVIDS 217 (335)
T ss_dssp HHHHHHHHHHHHTC--EEEECCCCTTTC-----------SSCCSHHHHHHHHTTCCCTTEEEEEEH
T ss_pred HHHHHHHHHHHcCC--EEEEeeCCcccc-----------cccCCHHHHHHHHHhcCCCCeeEEEec
Confidence 99999999999995 5677 4332110 122333455677777776666665533
No 70
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=90.42 E-value=1.6 Score=43.33 Aligned_cols=110 Identities=17% Similarity=0.283 Sum_probs=82.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFA 193 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig 193 (706)
.|.+..++.++++.++|.++|=++..+....+.++++++++. ++-+-|+.=++..-+..|+++ +|-| +-|+.
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~----~l~vgaGtvl~~d~~~~A~~aGAd~v-~~p~~-- 98 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRP----DFLIAAGTVLTAEQVVLAKSSGADFV-VTPGL-- 98 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT----TCEEEEESCCSHHHHHHHHHHTCSEE-ECSSC--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCc----CcEEeeCcEeeHHHHHHHHHCCCCEE-EECCC--
Confidence 455667888999999999999999999888899998998742 355667776677888888776 7777 44531
Q ss_pred cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCC
Q 005248 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 273 (706)
Q Consensus 194 ~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~ 273 (706)
+ .++++.|+++|.++=+|++ ||+ .+..+.+.|
T Consensus 99 d--------------------------~~v~~~ar~~g~~~i~Gv~--------------t~~--------e~~~A~~~G 130 (224)
T 1vhc_A 99 N--------------------------PKIVKLCQDLNFPITPGVN--------------NPM--------AIEIALEMG 130 (224)
T ss_dssp C--------------------------HHHHHHHHHTTCCEECEEC--------------SHH--------HHHHHHHTT
T ss_pred C--------------------------HHHHHHHHHhCCCEEeccC--------------CHH--------HHHHHHHCC
Confidence 1 3588999999999989863 232 233356778
Q ss_pred CCcEEE
Q 005248 274 FHNFLF 279 (706)
Q Consensus 274 f~~ivi 279 (706)
.+-+.+
T Consensus 131 ad~vk~ 136 (224)
T 1vhc_A 131 ISAVKF 136 (224)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 887777
No 71
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=90.38 E-value=0.57 Score=48.52 Aligned_cols=109 Identities=10% Similarity=0.217 Sum_probs=80.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-||+|=- | ..-|.+.+++-+++|++.|.+.+==-++ ..+.+.+.+++++ +++|+++|=.+ ++.-+.
T Consensus 186 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~iPI~~de~~~~~~~~~ 256 (359)
T 1mdl_A 186 VGDDFGIMVDY--N-QSLDVPAAIKRSQALQQEGVTWIEEPTL-QHDYEGHQRIQSK-----LNVPVQMGENWLGPEEMF 256 (359)
T ss_dssp HCSSSEEEEEC--T-TCSCHHHHHHHHHHHHHHTCSCEECCSC-TTCHHHHHHHHHT-----CSSCEEECTTCCSHHHHH
T ss_pred hCCCCEEEEEC--C-CCCCHHHHHHHHHHHHHhCCCeEECCCC-hhhHHHHHHHHHh-----CCCCEEeCCCCCCHHHHH
Confidence 56677777631 2 2336777788888899999887643333 2456777888874 78999999665 567777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ .+|-|.|.|+.+|.-. .+.++++.|+++|+++=+|
T Consensus 257 ~~i~~~~~d~v~ik~~~~GGi~----------------------~~~~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 257 KALSIGACRLAMPDAMKIGGVT----------------------GWIRASALAQQFGIPMSSH 297 (359)
T ss_dssp HHHHTTCCSEECCBTTTTTHHH----------------------HHHHHHHHHHHTTCCBCCB
T ss_pred HHHHcCCCCEEeecchhhCCHH----------------------HHHHHHHHHHHcCCeEeec
Confidence 7765 3999999999998743 5678999999999998666
No 72
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=90.33 E-value=1.4 Score=46.98 Aligned_cols=100 Identities=14% Similarity=0.205 Sum_probs=76.9
Q ss_pred CHHHHHHHHHHHHHcCCCEE-EEecCC-----HHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHHHHhh--hcCcee
Q 005248 116 DVAGTVEEVMRIADQGADLV-RITVQG-----KREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAE--CFDKIR 186 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiV-Rvtv~~-----~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al~a~~--~~~kiR 186 (706)
|.+..++-+++|++.|-.|+ -|-=|= .++-+.+.+++++|+++|+++||++|=. +++.-....++ +++-|.
T Consensus 250 ~~~~a~~~~~~L~~~~~~i~~~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ 329 (413)
T 1kcz_A 250 DIKAMADYIQTLAEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQ 329 (413)
T ss_dssp CHHHHHHHHHHHHHHHTTSCEEEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEE
T ss_pred CHHHHHHHHHHHHhhcCCcceEEecCCCCCCCcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEE
Confidence 66777788888888732233 455442 5678889999998888899999999955 55666666664 499999
Q ss_pred eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 187 VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 187 INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
|.|..+|.-. ...++++.|+++|+++=+|
T Consensus 330 ik~~~~GGit----------------------~a~~i~~~A~~~gi~~~~~ 358 (413)
T 1kcz_A 330 IKTPDLGGVN----------------------NIADAIMYCKANGMGAYCG 358 (413)
T ss_dssp ECTGGGSSTH----------------------HHHHHHHHHHHTTCEEEEC
T ss_pred eCccccCCHH----------------------HHHHHHHHHHHcCCEEEec
Confidence 9999998733 4577999999999999776
No 73
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=90.25 E-value=1.4 Score=42.24 Aligned_cols=148 Identities=10% Similarity=0.018 Sum_probs=91.2
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH----HHHHHHHHHHHhhccCCcCcceee-ccCCC---H--
Q 005248 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK----READACFEIKNSLVQKNYNIPLVA-DIHFA---P-- 172 (706)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~----~~A~al~~I~~~L~~~g~~iPLVA-DIHF~---~-- 172 (706)
.+.+++.+ ....+.+.. +..++++|.+-|=+..... .....+.++++.|++.|..+.-+. ...|+ .
T Consensus 8 ~lg~~~~~-~~~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~ 83 (272)
T 2q02_A 8 RFCINRKI-APGLSIEAF---FRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEV 83 (272)
T ss_dssp GEEEEGGG-CTTSCHHHH---HHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHH
T ss_pred hhhhcccc-cCCCCHHHH---HHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHH
Confidence 56777777 334566544 4556678999988874221 123456677888888888775442 22232 1
Q ss_pred ----HHHHH-Hhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhH-HhhHHHHHHHHHHcCCeEEEec-CCCCCc
Q 005248 173 ----SVALR-VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHI-EEVFSPLVEKCKKYGRAVRIGT-NHGSLS 244 (706)
Q Consensus 173 ----~~Al~-a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I-~~~f~~vv~~ake~~~~IRIGv-N~GSL~ 244 (706)
+.+++ |.+. +..|++.||+.+. +..+++ .+.+.++.+.|+++|+ +|++ ||+ -+
T Consensus 84 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~----------------~~~~~~~~~~l~~l~~~a~~~gv--~l~~E~~~-~~ 144 (272)
T 2q02_A 84 VKKTEGLLRDAQGVGARALVLCPLNDGT----------------IVPPEVTVEAIKRLSDLFARYDI--QGLVEPLG-FR 144 (272)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSB----------------CCCHHHHHHHHHHHHHHHHTTTC--EEEECCCC-ST
T ss_pred HHHHHHHHHHHHHhCCCEEEEccCCCch----------------hHHHHHHHHHHHHHHHHHHHcCC--EEEEEecC-CC
Confidence 12223 3333 8889999997643 124566 7888999999999996 5677 564 11
Q ss_pred hhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCC
Q 005248 245 DRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (706)
Q Consensus 245 ~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSn 285 (706)
. .+..++ -+.++++++.| .++-+-+=..+
T Consensus 145 ~----~~~~~~-------~~~~~l~~~v~-~~~g~~~D~~h 173 (272)
T 2q02_A 145 V----SSLRSA-------VWAQQLIREAG-SPFKVLLDTFH 173 (272)
T ss_dssp T----CSCCCH-------HHHHHHHHHHT-CCCEEEEEHHH
T ss_pred c----ccccCH-------HHHHHHHHHhC-cCeEEEEEchH
Confidence 0 122333 34456777778 78888774444
No 74
>3b0g_A NII3, nitrite reductase; siroheme, Fe4S4 binding protein, oxidoreductase; HET: SRM; 1.25A {Nicotiana tabacum} PDB: 3vkp_A* 3vkq_A* 3vkr_A* 3vks_A* 3vkt_A* 3b0n_A* 3b0m_A* 3b0j_A* 3b0l_A* 3b0h_A*
Probab=90.21 E-value=0.27 Score=55.38 Aligned_cols=56 Identities=29% Similarity=0.562 Sum_probs=44.8
Q ss_pred eEecc---CCCCcccccHHHHHHHHHHHhC---CCC-CCeEEEEcccccCccccccCceeeecc
Q 005248 641 EYVSC---PSCGRTLFDLQEISAEIREKTS---HLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697 (706)
Q Consensus 641 e~ISC---PsCGRTlfDLq~~~a~Ik~~t~---hLk-glkIAIMGCIVNGPGEmadAD~GyvG~ 697 (706)
..++| |.|..-++|-+..+..|-+++. +++ .+||+|=||. |+=|...-||+|++|.
T Consensus 465 ~i~aC~G~~~C~~a~~dt~~~a~~l~~~l~~~~~lp~k~kI~iSGCp-n~C~~~~~aDIG~vG~ 527 (591)
T 3b0g_A 465 GLVACTGNQFCGQAIIETKARSLKITEEVQRQVSLTKPVRMHWTGCP-NTCAQVQVADIGFMGC 527 (591)
T ss_dssp TCEECCGGGTCTTCSSCCHHHHHHHHHHHHHHEECCSCCCEEEESST-TCTTCGGGSSEEEEEE
T ss_pred ceecCCCcccCcchhhhHHHHHHHHHHHHHHhcCCCcceEEEEeCCC-CcccCcccccEEEEEE
Confidence 46799 5899999997666555544432 466 8999999997 9999999999999997
No 75
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=90.18 E-value=1.1 Score=47.92 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=79.6
Q ss_pred CCHHHHHHHHHHHHHcCCCE-EEEecCC-----HHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHHHHhh--hcCce
Q 005248 115 KDVAGTVEEVMRIADQGADL-VRITVQG-----KREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAE--CFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGcei-VRvtv~~-----~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al~a~~--~~~ki 185 (706)
-|.+..++-+++|++.|..+ +-|-=|= .++-+.+.+++++|.++|+++||++|=+ +++.-....++ +++-|
T Consensus 249 ~~~~~A~~~~~~L~~~~~~~~l~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i 328 (413)
T 1kko_A 249 MDPVRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMV 328 (413)
T ss_dssp TCHHHHHHHHHHTGGGGTTSCEEEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCHHHHHHHHHHHHhccCCcceEEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEE
Confidence 36777788888888877552 2666553 5688899999998888889999999964 45665556554 59999
Q ss_pred eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 186 RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
.|.|..+|.-. ...++++.|+++|+++=+|-.
T Consensus 329 ~ik~~~~GGit----------------------ea~~i~~~A~~~gi~~~~~~~ 360 (413)
T 1kko_A 329 QIKTPDLGGIH----------------------NIVDAVLYCNKHGMEAYQGGT 360 (413)
T ss_dssp EECGGGGSSTH----------------------HHHHHHHHHHHHTCEEEECCC
T ss_pred EeCccccCCHH----------------------HHHHHHHHHHHcCCeEEecCC
Confidence 99999998733 457799999999999977654
No 76
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=90.17 E-value=0.86 Score=47.58 Aligned_cols=144 Identities=16% Similarity=0.156 Sum_probs=88.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCH-------H-HHHHHHHHHHhhccCCcCcceeeccC----------C---CHH------
Q 005248 121 VEEVMRIADQGADLVRITVQGK-------R-EADACFEIKNSLVQKNYNIPLVADIH----------F---APS------ 173 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~-------~-~A~al~~I~~~L~~~g~~iPLVADIH----------F---~~~------ 173 (706)
.+.+..++++|++-|=+...+. . ..+.+.++++.|.+.|+.+..+.=.. | ++.
T Consensus 36 ~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i 115 (386)
T 1muw_A 36 VETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYAL 115 (386)
T ss_dssp HHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEEEecccccccccccCCCCCCCHHHHHHHH
Confidence 3445666677999998876321 1 14678888999999999988775311 2 221
Q ss_pred -HHH---H-Hhhh-cCceeeCCCCCCcchhhccccccc-hHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CCCCCch
Q 005248 174 -VAL---R-VAEC-FDKIRVNPGNFADRRAQFEQLEYT-DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSD 245 (706)
Q Consensus 174 -~Al---~-a~~~-~~kiRINPGNig~~~k~F~~~~Yt-deeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~GSL~~ 245 (706)
... + |.+. +..|++.||..+. .|. +..+.+.++++.+.+.++.+.|+++|..|||++ |+..-+
T Consensus 116 ~~~~~~i~~A~~LGa~~vvv~~g~~~~--------~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~- 186 (386)
T 1muw_A 116 RKTIRNIDLAVELGAKTYVAWGGREGA--------ESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEP- 186 (386)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTTCEE--------SSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSS-
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCcc--------cccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeCCCCC-
Confidence 111 2 2233 8889999986532 011 123567789999999999999999997778888 442110
Q ss_pred hHHHhhCCChHHHHHHHHHHHHHHHHCCCCc-EEEEE
Q 005248 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHN-FLFSM 281 (706)
Q Consensus 246 ~il~rygdt~eamVeSAle~~~i~e~~~f~~-iviS~ 281 (706)
+ -..+..| .-+.++++++.|-.+ +-+-+
T Consensus 187 ~-~~~~~~t-------~~~~~~li~~v~~pn~vgl~l 215 (386)
T 1muw_A 187 R-GDILLPT-------VGHALAFIERLERPELYGVNP 215 (386)
T ss_dssp S-SEESSCS-------HHHHHHHHTTSSSGGGEEECC
T ss_pred c-ccccCCC-------HHHHHHHHHHhCCccceEEEe
Confidence 0 0012223 334456667776654 55543
No 77
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=90.15 E-value=1.2 Score=46.32 Aligned_cols=147 Identities=14% Similarity=0.142 Sum_probs=93.4
Q ss_pred eeEEEceeecCCCCce-EEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE------------ecC-CHH---HHHHHHHH
Q 005248 89 RTVMVGNVAIGSEHPI-RVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI------------TVQ-GKR---EADACFEI 151 (706)
Q Consensus 89 r~V~VG~v~IGG~~PI-~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRv------------tv~-~~~---~A~al~~I 151 (706)
..|.||++.||+++|+ .|=. ...-.|.+...+-+.+|.++|+++++. |.+ +.+ --+.++.+
T Consensus 4 ~~i~i~~~~iG~~~~~~vIAG--pc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~sf~g~~l~~gl~~l 81 (292)
T 1o60_A 4 KIVKIGNIDVANDKPFVLFGG--MNVLESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGMEEGLKIF 81 (292)
T ss_dssp CCEEETTEEECTTSCCEEEEE--EEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHH
T ss_pred cEEEECCEEECCCCceEEEEe--cCCccCHHHHHHHHHHHHHHhhhhCEeEEEhhhcccCCCCChHHhhhhhHHHHHHHH
Confidence 4589999999999854 4543 345678999999999999987554322 222 111 13344444
Q ss_pred HHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcC
Q 005248 152 KNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG 231 (706)
Q Consensus 152 ~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~ 231 (706)
++..+ ...+|++.++|-...+. ..++.++-+-|--+|+-+ .++++.+-..+
T Consensus 82 ~~~~~--~~Glp~~te~~d~~~~~-~l~~~vd~~kIgA~~~~n--------------------------~~Ll~~~a~~~ 132 (292)
T 1o60_A 82 QELKD--TFGVKIITDVHEIYQCQ-PVADVVDIIQLPAFLARQ--------------------------TDLVEAMAKTG 132 (292)
T ss_dssp HHHHH--HHCCEEEEECCSGGGHH-HHHTTCSEEEECGGGTTC--------------------------HHHHHHHHHTT
T ss_pred HHHHH--HcCCcEEEecCCHHHHH-HHHhcCCEEEECcccccC--------------------------HHHHHHHHcCC
Confidence 44322 36799999998654444 444678889998888743 23677777899
Q ss_pred CeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 232 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 232 ~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~ 281 (706)
+||=+=..-. -+++.|..+ +++++..|=.++++=.
T Consensus 133 kPV~lk~G~~-----------~t~~ei~~A----v~~i~~~Gn~~i~L~~ 167 (292)
T 1o60_A 133 AVINVKKPQF-----------LSPSQMGNI----VEKIEECGNDKIILCD 167 (292)
T ss_dssp CEEEEECCTT-----------SCGGGHHHH----HHHHHHTTCCCEEEEE
T ss_pred CcEEEeCCCC-----------CCHHHHHHH----HHHHHHcCCCeEEEEE
Confidence 9994433221 134444333 4567788877777654
No 78
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=89.87 E-value=0.99 Score=47.70 Aligned_cols=109 Identities=9% Similarity=0.093 Sum_probs=80.1
Q ss_pred cCCCCceEEEeccCCCCC--CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHH-hhccCCcCcceeeccCC-CHH
Q 005248 98 IGSEHPIRVQTMTTNDTK--DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKN-SLVQKNYNIPLVADIHF-APS 173 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~--Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~-~L~~~g~~iPLVADIHF-~~~ 173 (706)
+|.+-||.|= .|. .- |.+.+++-+++|++.|.+.+==-++ ..+.+.++++++ + +++|+++|=.+ ++.
T Consensus 190 ~G~d~~l~vD--an~-~~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~~-----~~iPI~~dE~~~~~~ 260 (401)
T 2hzg_A 190 LGPDGDLMVD--VGQ-IFGEDVEAAAARLPTLDAAGVLWLEEPFD-AGALAAHAALAGRG-----ARVRIAGGEAAHNFH 260 (401)
T ss_dssp HCSSSEEEEE--CTT-TTTTCHHHHHTTHHHHHHTTCSEEECCSC-TTCHHHHHHHHTTC-----CSSEEEECTTCSSHH
T ss_pred hCCCCeEEEE--CCC-CCCCCHHHHHHHHHHHHhcCCCEEECCCC-ccCHHHHHHHHhhC-----CCCCEEecCCcCCHH
Confidence 4666777762 122 23 6777888888899999888743333 245666777776 4 68999999665 567
Q ss_pred HHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 174 VALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 174 ~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
-+..+++ .+|-|.|.|+.+|.-. .+.++++.|+++|+++=+|
T Consensus 261 ~~~~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 261 MAQHLMDYGRIGFIQIDCGRIGGLG----------------------PAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHSCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHCCCCCEEEeCcchhCCHH----------------------HHHHHHHHHHHcCCEEecC
Confidence 7777775 4999999999998743 5678999999999998777
No 79
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=89.84 E-value=0.91 Score=48.08 Aligned_cols=110 Identities=5% Similarity=0.042 Sum_probs=80.9
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHH-HhhccCCcCcceeeccCC-CHHH
Q 005248 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIK-NSLVQKNYNIPLVADIHF-APSV 174 (706)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~-~~L~~~g~~iPLVADIHF-~~~~ 174 (706)
.+|.+.||+|= .| ..-|.+.+++-+++|++.|.+.+==-++. .+.+.+.+++ + .+++|+++|=.. ++.-
T Consensus 191 a~g~d~~l~vD--an-~~~~~~~A~~~~~~l~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~~iPIa~dE~i~~~~~ 261 (389)
T 3ozy_A 191 RVGADVEILVD--AN-QSLGRHDALAMLRILDEAGCYWFEEPLSI-DDIEGHRILRAQ-----GTPVRIATGENLYTRNA 261 (389)
T ss_dssp HHCTTSEEEEE--CT-TCCCHHHHHHHHHHHHHTTCSEEESCSCT-TCHHHHHHHHTT-----CCSSEEEECTTCCHHHH
T ss_pred HcCCCceEEEE--CC-CCcCHHHHHHHHHHHHhcCCCEEECCCCc-ccHHHHHHHHhc-----CCCCCEEeCCCCCCHHH
Confidence 35777888774 22 23357777777889999999888544442 3456677777 5 488999999664 4566
Q ss_pred HHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 175 ALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 175 Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
+..+++ .+|-|.|.|+..|.-. ...+++..|+++|+++=+|
T Consensus 262 ~~~~i~~~~~d~v~ik~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 262 FNDYIRNDAIDVLQADASRAGGIT----------------------EALAISASAASAHLAWNPH 304 (389)
T ss_dssp HHHHHHTTCCSEECCCTTTSSCHH----------------------HHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCEEEec
Confidence 666665 4999999999998743 5678999999999998776
No 80
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=89.81 E-value=0.97 Score=48.42 Aligned_cols=109 Identities=8% Similarity=0.051 Sum_probs=79.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (706)
+|.+.||+|= .| ..-|.+.+++-+++|++.|.+.+==-++- .+.+.+.+|+++ +++|+.+|=.+. +.-+.
T Consensus 198 ~G~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 268 (412)
T 4e4u_A 198 VGSKADLLFG--TH-GQMVPSSAIRLAKRLEKYDPLWFEEPVPP-GQEEAIAQVAKH-----TSIPIATGERLTTKYEFH 268 (412)
T ss_dssp HTTSSEEEEC--CC-SCBCHHHHHHHHHHHGGGCCSEEECCSCS-SCHHHHHHHHHT-----CSSCEEECTTCCHHHHHH
T ss_pred hCCCCeEEEE--CC-CCCCHHHHHHHHHHhhhcCCcEEECCCCh-hhHHHHHHHHhh-----CCCCEEecCccCCHHHHH
Confidence 4666777762 22 23457777777888999998887644442 245677888874 789999996654 55566
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ ++|-|.+.|+..|.-. ....+...|+++|+++=++
T Consensus 269 ~~i~~~a~d~v~~d~~~~GGit----------------------~~~kia~~A~~~gi~v~~h 309 (412)
T 4e4u_A 269 KLLQAGGASILQLNVARVGGLL----------------------EAKKIATLAEVHYAQIAPH 309 (412)
T ss_dssp HHHHTTCCSEECCCTTTTTSHH----------------------HHHHHHHHHHHTTCEECCC
T ss_pred HHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCEEEec
Confidence 6655 4999999999998733 5678999999999998554
No 81
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=89.75 E-value=0.85 Score=47.95 Aligned_cols=112 Identities=5% Similarity=0.013 Sum_probs=84.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (706)
+|.+.|++|= .|..-.|.+.+++-+++|++.|.+.+==-++ ..+.+.+.+|+++ +++|+++|=... +.-+.
T Consensus 190 ~g~~~~l~vD--an~~~~d~~~A~~~~~~l~~~~i~~iEqP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 261 (374)
T 3sjn_A 190 AGPEMEVQID--LASKWHTCGHSAMMAKRLEEFNLNWIEEPVL-ADSLISYEKLSRQ-----VSQKIAGGESLTTRYEFQ 261 (374)
T ss_dssp HCSSSEEEEE--CTTTTCSHHHHHHHHHHSGGGCCSEEECSSC-TTCHHHHHHHHHH-----CSSEEEECTTCCHHHHHH
T ss_pred hCCCCeEEEE--CCCCCCCHHHHHHHHHHhhhcCceEEECCCC-cccHHHHHHHHhh-----CCCCEEeCCCcCCHHHHH
Confidence 5778888884 3443345888888889999999888764444 2356778888885 789999996654 55666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
.+++ .+|-|.|.|+..|.-. ....+...|+++|+++=+|..
T Consensus 262 ~~l~~~~~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 262 EFITKSNADIVQPDITRCGGIT----------------------EMKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHCCSEECCBTTTSSHHH----------------------HHHHHHHHHHHHTCEECCBCC
T ss_pred HHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCEEEecCC
Confidence 6665 4999999999998733 567799999999999866654
No 82
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=89.70 E-value=1.5 Score=45.75 Aligned_cols=109 Identities=8% Similarity=0.060 Sum_probs=82.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.||+|=- | ..-|.+.+++-+++|++.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 188 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPI~~dE~~~~~~~~~ 258 (371)
T 2ovl_A 188 LGDSFPLMVDA--N-MKWTVDGAIRAARALAPFDLHWIEEPTI-PDDLVGNARIVRE-----SGHTIAGGENLHTLYDFH 258 (371)
T ss_dssp HCTTSCEEEEC--T-TCSCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHH-----HCSCEEECTTCCSHHHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEECCCC-cccHHHHHHHHhh-----CCCCEEeCCCCCCHHHHH
Confidence 57778887632 2 2346777888888899999988753333 2456778888885 67999999664 567777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ .+|-|.|.|+.+|.-. .+.++++.|+++|+++=+|
T Consensus 259 ~~i~~~~~d~v~ik~~~~GGi~----------------------~~~~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 259 NAVRAGSLTLPEPDVSNIGGYT----------------------TFRKVAALAEANNMLLTSH 299 (371)
T ss_dssp HHHHHTCCSEECCCTTTTTSHH----------------------HHHHHHHHHHHTTCCEEEC
T ss_pred HHHHcCCCCEEeeCccccCCHH----------------------HHHHHHHHHHHcCCeEccc
Confidence 7765 4999999999998844 5678999999999998775
No 83
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=89.39 E-value=10 Score=41.42 Aligned_cols=157 Identities=13% Similarity=0.182 Sum_probs=95.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeC-C
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVN-P 189 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRIN-P 189 (706)
...++.-++=+++|.++|.+.+=+..| ++++.+.++.|.+. +.+..+.+=.--+.+=+..|+++ ++.|+|- |
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~----~~~~~v~~~~r~~~~di~~A~~aG~~~V~i~~s 132 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKL----GLKCKILTHIRCHMDDARVAVETGVDGVDVVIG 132 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTS----CCSSEEEEEEESCHHHHHHHHHTTCSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHHhc----CCCCEEEEeeccChhhHHHHHHcCCCEEEEEee
Confidence 346688888889999999999999877 46777888888763 34444443222233334455565 8878762 3
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHH
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARIC 269 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~ 269 (706)
-.=. |. ...+...++.+-+++.+.|+.||++|..+|.+.--+ |..+++- +++.++.+
T Consensus 133 ~Sd~-----~~-----~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda---------~r~d~~~----~~~v~~~~ 189 (423)
T 3ivs_A 133 TSQY-----LR-----KYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDS---------FRSDLVD----LLSLYKAV 189 (423)
T ss_dssp C-----------------------CHHHHHHHHHHHHHHTTTCEEEEEEESG---------GGSCHHH----HHHHHHHH
T ss_pred ccHH-----HH-----HHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccC---------cCCCHHH----HHHHHHHH
Confidence 2110 11 011334556677788899999999999998875211 2234544 36677778
Q ss_pred HHCCCCcEEEEEecC----ChhHHHHHHHHHHHh
Q 005248 270 RKLDFHNFLFSMKAS----NPVVMVQAYRLLVAE 299 (706)
Q Consensus 270 e~~~f~~iviS~KaS----nv~~~i~ayrlla~~ 299 (706)
.+.|-+. |+++.+ .|..+-+-.+.|.++
T Consensus 190 ~~~Ga~~--i~l~DTvG~~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 190 DKIGVNR--VGIADTVGCATPRQVYDLIRTLRGV 221 (423)
T ss_dssp HHHCCSE--EEEEETTSCCCHHHHHHHHHHHHHH
T ss_pred HHhCCCc--cccCCccCcCCHHHHHHHHHHHHhh
Confidence 8889874 677765 344444444444444
No 84
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=89.20 E-value=0.4 Score=52.21 Aligned_cols=58 Identities=22% Similarity=0.364 Sum_probs=46.6
Q ss_pred eEeccCC---CCcccccHHHHHHHHHHHhC------CCC-CCeEEEEcccccCcccc-ccCceeeeccCC
Q 005248 641 EYVSCPS---CGRTLFDLQEISAEIREKTS------HLP-GVSIAIMGCIVNGPGEM-ADADFGYVGGAP 699 (706)
Q Consensus 641 e~ISCPs---CGRTlfDLq~~~a~Ik~~t~------hLk-glkIAIMGCIVNGPGEm-adAD~GyvG~~~ 699 (706)
..++||+ |.--.+|-+.++.+|.+++. .|+ .+||+|=||. |+=+.. .-+|+|++|.-.
T Consensus 172 ni~aC~G~~~C~~a~~Dt~~la~~L~~~l~~~~~~~~LP~KfKI~iSGCp-N~C~~~~~~~DIGiiG~~r 240 (418)
T 3mm5_A 172 TPSACMGPALCEFACYDTLELCYDLTMTYQDELHRPMWPYKFKIKCAGCP-NDCVASKARSDFAIIGTWK 240 (418)
T ss_dssp CCEECCGGGTCTTCSSCHHHHHHHHHHHTHHHHHSCCSSSCBCEEEESST-TCTTCHHHHCSEEEEEEES
T ss_pred ceEecCCcccccchhhhHHHHHHHHHHHHHHhhhhccCCcceEEeeeccc-cchhhHHHhcccccccccc
Confidence 4789976 66677898999988877652 566 7999999997 777886 789999999633
No 85
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=89.17 E-value=6.2 Score=41.74 Aligned_cols=71 Identities=17% Similarity=0.249 Sum_probs=55.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCccee-eccC--CCHHHHHHHhhhcCceee
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLV-ADIH--FAPSVALRVAECFDKIRV 187 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLV-ADIH--F~~~~Al~a~~~~~kiRI 187 (706)
..+.+..++++.++.+.|...+.+-+-. .++.+.++.||+.+ |-+++|. .|.| |++.-|+..++.+++..|
T Consensus 140 ~~~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~---g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~i 215 (391)
T 3gd6_A 140 SEEVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEF---GSRVRIKSYDFSHLLNWKDAHRAIKRLTKYDL 215 (391)
T ss_dssp TTHHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH---GGGCEEEEEECTTCSCHHHHHHHHHHHTTCCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHc---CCCCcEEEecCCCCcCHHHHHHHHHHHHhcCC
Confidence 4567899999999999999999998743 57778888888753 5679999 9988 566666666777777654
No 86
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=88.96 E-value=0.7 Score=48.60 Aligned_cols=108 Identities=9% Similarity=0.069 Sum_probs=80.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-||.|= .| ..-|.+.+++-+++|++.|.+.+==-++ ..+.+.+.+|+++ +++|+++|=.+ ++.-+.
T Consensus 205 ~g~d~~l~vD--an-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPI~~dE~~~~~~~~~ 275 (388)
T 2nql_A 205 LGPQAKIAAD--MH-WNQTPERALELIAEMQPFDPWFAEAPVW-TEDIAGLEKVSKN-----TDVPIAVGEEWRTHWDMR 275 (388)
T ss_dssp HCTTSEEEEE--CC-SCSCHHHHHHHHHHHGGGCCSCEECCSC-TTCHHHHHHHHTS-----CCSCEEECTTCCSHHHHH
T ss_pred hCCCCEEEEE--CC-CCCCHHHHHHHHHHHhhcCCCEEECCCC-hhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 6778888873 12 2346788888889999999887642232 2456777888874 78999999664 677788
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ .+|-|.|.|.. |.-. .+.++++.|+++|+++=+|
T Consensus 276 ~~i~~~~~d~v~ik~~~-GGit----------------------~~~~i~~~A~~~g~~~~~h 315 (388)
T 2nql_A 276 ARIERCRIAIVQPEMGH-KGIT----------------------NFIRIGALAAEHGIDVIPH 315 (388)
T ss_dssp HHHTTSCCSEECCCHHH-HCHH----------------------HHHHHHHHHHHHTCEECCC
T ss_pred HHHHcCCCCEEEecCCC-CCHH----------------------HHHHHHHHHHHcCCeEEee
Confidence 7776 39999999988 8743 5678999999999987554
No 87
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=88.82 E-value=2.2 Score=43.68 Aligned_cols=94 Identities=16% Similarity=0.230 Sum_probs=68.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---------HHHHH-----------HHHHHHHhhccCCcCcceeeccCCCH---
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQG---------KREAD-----------ACFEIKNSLVQKNYNIPLVADIHFAP--- 172 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~---------~~~A~-----------al~~I~~~L~~~g~~iPLVADIHF~~--- 172 (706)
|.+.|++.++.|.++|+|++=+-+|= .+.|. .+-++.+++|+.+.++|+|-=..+||
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~ 109 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFA 109 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 77999999999999999999999765 34333 33445555666568899998888886
Q ss_pred ----HHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 173 ----SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 173 ----~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
+.+..|+++ ++.+=|.--- ++ ...++++.|+++|+..
T Consensus 110 ~g~e~f~~~~~~aGvdgvii~Dlp-------~e------------------e~~~~~~~~~~~gl~~ 151 (267)
T 3vnd_A 110 NGIDEFYTKAQAAGVDSVLIADVP-------VE------------------ESAPFSKAAKAHGIAP 151 (267)
T ss_dssp HCHHHHHHHHHHHTCCEEEETTSC-------GG------------------GCHHHHHHHHHTTCEE
T ss_pred hhHHHHHHHHHHcCCCEEEeCCCC-------Hh------------------hHHHHHHHHHHcCCeE
Confidence 345577776 8887774111 11 2467899999999875
No 88
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=88.79 E-value=0.98 Score=48.14 Aligned_cols=109 Identities=12% Similarity=0.115 Sum_probs=78.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (706)
+|.+.||+|= .| ..-+.+.+++-+++|++.|.+.+==-++ ..+.+.+.+|+++ +++|+.+|=.+. +.-+.
T Consensus 205 ~G~d~~l~vD--an-~~~~~~~A~~~~~~l~~~~i~~iEeP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 275 (404)
T 4e5t_A 205 VGTKADLLFG--TH-GQFTVSGAKRLARRLEAYDPLWFEEPIP-PEKPEDMAEVARY-----TSIPVATGERLCTKYEFS 275 (404)
T ss_dssp HGGGSEEEEC--CC-SCBCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCHHHHHH
T ss_pred cCCCCeEEEe--CC-CCcCHHHHHHHHHHHhhcCCcEEECCCC-cccHHHHHHHHhh-----CCCCEEeCCCcCCHHHHH
Confidence 3555666662 12 2235777777788899999888764444 1245677888885 789999996654 55666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ ++|-|.+.|+..|.-. ....+...|+++|+++=++
T Consensus 276 ~~i~~~a~d~v~~d~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h 316 (404)
T 4e5t_A 276 RVLETGAASILQMNLGRVGGLL----------------------EAKKIAAMAECHSAQIAPH 316 (404)
T ss_dssp HHHHHTCCSEECCCTTTSSCHH----------------------HHHHHHHHHHHTTCEECCC
T ss_pred HHHHhCCCCEEecCccccCCHH----------------------HHHHHHHHHHHcCCEEeec
Confidence 6655 4999999999998743 5678999999999998544
No 89
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=88.73 E-value=1.8 Score=45.37 Aligned_cols=113 Identities=16% Similarity=0.173 Sum_probs=82.1
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHH
Q 005248 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (706)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (706)
.+|.+.+++|= .|. .-|.+.+++-+++|++.|.+.+==-++ ..+.+.+.+++++ +++|+.+|=. +++.-+
T Consensus 180 ~~g~~~~l~vD--aN~-~~~~~~A~~~~~~l~~~~i~~iEqP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 250 (368)
T 3q45_A 180 AAGDSITLRID--ANQ-GWSVETAIETLTLLEPYNIQHCEEPVS-RNLYTALPKIRQA-----CRIPIMADESCCNSFDA 250 (368)
T ss_dssp HHCSSSEEEEE--CTT-CBCHHHHHHHHHHHGGGCCSCEECCBC-GGGGGGHHHHHHT-----CSSCEEESTTCCSHHHH
T ss_pred HhCCCCeEEEE--CCC-CCChHHHHHHHHHHhhcCCCEEECCCC-hhHHHHHHHHHhh-----CCCCEEEcCCcCCHHHH
Confidence 35777788774 222 235677777788888888877753333 2345667777774 7899999954 566666
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
..+++ .++-|.|.|...|.-. ...++.+.|+++|+++=+|.+.
T Consensus 251 ~~~~~~~~~d~v~~k~~~~GGit----------------------~~~~i~~~A~~~gi~~~~~~~~ 295 (368)
T 3q45_A 251 ERLIQIQACDSFNLKLSKSAGIT----------------------NALNIIRLAEQAHMPVQVGGFL 295 (368)
T ss_dssp HHHHHTTCCSEEEECTTTTTSHH----------------------HHHHHHHHHHHTTCCEEECCSS
T ss_pred HHHHHcCCCCeEEechhhcCCHH----------------------HHHHHHHHHHHcCCcEEecCcc
Confidence 66665 4999999999998843 5678999999999999886543
No 90
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=88.61 E-value=9.3 Score=39.23 Aligned_cols=158 Identities=10% Similarity=0.083 Sum_probs=92.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHHHHhhh--cCceeeC-
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAEC--FDKIRVN- 188 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al~a~~~--~~kiRIN- 188 (706)
..++.-++=+++|.++|.+.+=+..| ++.+.+.++.|++.+. +..+...+.-. -+-..|++|+.. ++.|+|-
T Consensus 24 ~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~--~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~~ 101 (293)
T 3ewb_X 24 FDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIK--HCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCC--SSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcC--CCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 45677888889999999999999977 4678888999988642 33332222211 112455555442 4445531
Q ss_pred CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHH
Q 005248 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARI 268 (706)
Q Consensus 189 PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i 268 (706)
|-+=...++.+ ..-.+..-+.+.++|+.||++|..++.+. ++. +-.+| +-.++.++.
T Consensus 102 ~~Sd~~~~~nl----------~~s~~e~l~~~~~~v~~a~~~g~~v~~~~-----~d~----~~~~~----~~~~~~~~~ 158 (293)
T 3ewb_X 102 ATSDVHMEYKL----------KMSRAEVLASIKHHISYARQKFDVVQFSP-----EDA----TRSDR----AFLIEAVQT 158 (293)
T ss_dssp ECSHHHHHHTT----------CCCHHHHHHHHHHHHHHHHTTCSCEEEEE-----ETG----GGSCH----HHHHHHHHH
T ss_pred cCcHHHHHHHh----------CCCHHHHHHHHHHHHHHHHhCCCEEEEEe-----ccC----CCCCH----HHHHHHHHH
Confidence 11100000000 11123444567789999999999998765 211 01233 455677788
Q ss_pred HHHCCCCcEEEEEecC----ChhHHHHHHHHHHHh
Q 005248 269 CRKLDFHNFLFSMKAS----NPVVMVQAYRLLVAE 299 (706)
Q Consensus 269 ~e~~~f~~iviS~KaS----nv~~~i~ayrlla~~ 299 (706)
+.+.|-+ .|+++-+ .|..+-+-.+.+.++
T Consensus 159 ~~~~G~~--~i~l~DT~G~~~P~~v~~lv~~l~~~ 191 (293)
T 3ewb_X 159 AIDAGAT--VINIPDTVGYTNPTEFGQLFQDLRRE 191 (293)
T ss_dssp HHHTTCC--EEEEECSSSCCCHHHHHHHHHHHHHH
T ss_pred HHHcCCC--EEEecCCCCCCCHHHHHHHHHHHHHh
Confidence 8899987 4677765 344444444444444
No 91
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=88.61 E-value=3 Score=40.62 Aligned_cols=131 Identities=10% Similarity=0.084 Sum_probs=84.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHH--HHHHHHHHHHhhccCCcCcceeeccCC------------------CH-
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQGKR--EADACFEIKNSLVQKNYNIPLVADIHF------------------AP- 172 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~--~A~al~~I~~~L~~~g~~iPLVADIHF------------------~~- 172 (706)
..+++. .+..++++|.+-|=+...+.. +.+.+.++++.|++.|+.+..++ .|| ++
T Consensus 20 ~~~l~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~ 95 (290)
T 3tva_A 20 DAGLGV---HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIF-GGFDGESYADIPTTARTVGLVPLE 95 (290)
T ss_dssp SSSSSB---CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEE-CCCTTCCCSSHHHHHHHSSSCSTT
T ss_pred CCCHHH---HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEe-eccCCcccccccccccccCCCCHH
Confidence 445554 456677789999999986643 25568888889999999877663 121 21
Q ss_pred ---------HHHHH-Hhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CC
Q 005248 173 ---------SVALR-VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NH 240 (706)
Q Consensus 173 ---------~~Al~-a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~ 240 (706)
+.+++ |.+. +..|++.||..... +.+.++++.+.+.++.+.|+++|+.+ ++ ||
T Consensus 96 ~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~-------------~~~~~~~~~~~l~~l~~~a~~~Gv~l--~lE~~ 160 (290)
T 3tva_A 96 TRASRVAEMKEISDFASWVGCPAIGLHIGFVPES-------------SSPDYSELVRVTQDLLTHAANHGQAV--HLETG 160 (290)
T ss_dssp THHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCT-------------TSHHHHHHHHHHHHHHHHHHTTTCEE--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCccc-------------chHHHHHHHHHHHHHHHHHHHcCCEE--EEecC
Confidence 12222 3333 88999999965321 23456778888999999999999755 54 22
Q ss_pred CCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 241 GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~ 281 (706)
. . +.-+..+++++.|-.++-+-+
T Consensus 161 ~-----------~-------~~~~~~~l~~~~~~~~~g~~~ 183 (290)
T 3tva_A 161 Q-----------E-------SADHLLEFIEDVNRPNLGINF 183 (290)
T ss_dssp S-----------S-------CHHHHHHHHHHHCCTTEEEEE
T ss_pred C-----------C-------CHHHHHHHHHhcCCCCEEEEe
Confidence 1 1 233455666666666666554
No 92
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=88.60 E-value=1.3 Score=45.99 Aligned_cols=110 Identities=18% Similarity=0.216 Sum_probs=79.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-+++|=- | .--|.+.+++-+++|++.|.+.+==-++ ..+.+.+.+++++ +++|+++|=.+ ++.-+.
T Consensus 185 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~~~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 255 (370)
T 1nu5_A 185 VGDRASVRVDV--N-QGWDEQTASIWIPRLEEAGVELVEQPVP-RANFGALRRLTEQ-----NGVAILADESLSSLSSAF 255 (370)
T ss_dssp HGGGCEEEEEC--T-TCCCHHHHHHHHHHHHHHTCCEEECCSC-TTCHHHHHHHHHH-----CSSEEEESTTCCSHHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhcCcceEeCCCC-cccHHHHHHHHHh-----CCCCEEeCCCCCCHHHHH
Confidence 45566666642 2 1235677777788888888887532222 2456777888875 68999999654 677777
Q ss_pred HHhhh--cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 177 ~a~~~--~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.+++. +|-|.|.|..+|.-. ...++++.|+++|+++=+|.
T Consensus 256 ~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1nu5_A 256 ELARDHAVDAFSLKLCNMGGIA----------------------NTLKVAAVAEAAGISSYGGT 297 (370)
T ss_dssp HHHHTTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHHTCEEEECC
T ss_pred HHHHhCCCCEEEEchhhcCCHH----------------------HHHHHHHHHHHcCCcEEecC
Confidence 77764 999999999998743 56789999999999986664
No 93
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=88.57 E-value=2.6 Score=43.40 Aligned_cols=108 Identities=15% Similarity=0.134 Sum_probs=78.9
Q ss_pred CCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCC--EEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHH
Q 005248 99 GSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD--LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (706)
Q Consensus 99 GG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGce--iVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (706)
|.+.+++| .. | ..-+.+.+++-+++|.+.|.+ .+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+
T Consensus 180 g~~~~l~v-Da-n-~~~~~~~a~~~~~~l~~~~i~~~~iE~P~~-~~~~~~~~~l~~~-----~~ipia~dE~~~~~~~~ 250 (345)
T 2zad_A 180 TRGAKYIV-DA-N-MGYTQKEAVEFARAVYQKGIDIAVYEQPVR-REDIEGLKFVRFH-----SPFPVAADESARTKFDV 250 (345)
T ss_dssp STTCEEEE-EC-T-TCSCHHHHHHHHHHHHHTTCCCSEEECCSC-TTCHHHHHHHHHH-----SSSCEEESTTCCSHHHH
T ss_pred CCCCeEEE-EC-C-CCCCHHHHHHHHHHHHhcCCCeeeeeCCCC-cccHHHHHHHHHh-----CCCCEEEeCCcCCHHHH
Confidence 56677776 22 2 233677778888888998888 6543233 2457778888875 68999999664 67777
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
..+++ .+|-|.|.|+. |.-. ....+++.|+++|+++=+|.
T Consensus 251 ~~~i~~~~~d~v~ik~~~-GGit----------------------~~~~i~~~A~~~g~~~~~~~ 292 (345)
T 2zad_A 251 MRLVKEEAVDYVNIKLMK-SGIS----------------------DALAIVEIAESSGLKLMIGC 292 (345)
T ss_dssp HHHHHHTCCSEEEECHHH-HHHH----------------------HHHHHHHHHHTTTCEEEECC
T ss_pred HHHHHhCCCCEEEEeccc-ccHH----------------------HHHHHHHHHHHcCCeEEEec
Confidence 77665 49999999998 7733 45779999999999997774
No 94
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=88.45 E-value=0.96 Score=48.29 Aligned_cols=107 Identities=11% Similarity=-0.015 Sum_probs=80.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (706)
+|.+.||+|= .|. .-+.+.+++-+++|++.|.+.+=.-. .+.+.+.+|+++ +++|+++|=.+. +.-+.
T Consensus 210 vG~d~~l~vD--aN~-~~~~~~A~~~~~~L~~~~i~~iE~P~---~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 278 (409)
T 3go2_A 210 AGPDVEILLD--LNF-NAKPEGYLKILRELADFDLFWVEIDS---YSPQGLAYVRNH-----SPHPISSCETLFGIREFK 278 (409)
T ss_dssp HCTTSEEEEE--CTT-CSCHHHHHHHHHHTTTSCCSEEECCC---SCHHHHHHHHHT-----CSSCEEECTTCCHHHHHH
T ss_pred hCCCCEEEEE--CCC-CCCHHHHHHHHHHHhhcCCeEEEeCc---CCHHHHHHHHhh-----CCCCEEeCCCcCCHHHHH
Confidence 5778888884 232 34677888888999999999887443 356667888874 789999996654 56666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.+++ ++|-|.|.|.. |.-. ....+...|+++|+++=++.
T Consensus 279 ~~i~~~~~d~v~~k~~~-GGit----------------------~~~~ia~~A~~~gi~~~~h~ 319 (409)
T 3go2_A 279 PFFDANAVDVAIVDTIW-NGVW----------------------QSMKIAAFADAHDINVAPHN 319 (409)
T ss_dssp HHHHTTCCSEEEECHHH-HCHH----------------------HHHHHHHHHHHTTCEEEECC
T ss_pred HHHHhCCCCEEEeCCCC-CCHH----------------------HHHHHHHHHHHcCCEEeecC
Confidence 6665 49999999987 6632 56789999999999997653
No 95
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=88.44 E-value=1.1 Score=47.20 Aligned_cols=109 Identities=10% Similarity=0.190 Sum_probs=79.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHc-CCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQ-GADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~a-GceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (706)
+|.+.||+|=- | ..-+.+.+++-+++|++. |.+.+==-++ ..+.+.+.+++++ +++|+++|=.+ ++.-+
T Consensus 181 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 251 (382)
T 2gdq_A 181 AGSSITMILDA--N-QSYDAAAAFKWERYFSEWTNIGWLEEPLP-FDQPQDYAMLRSR-----LSVPVAGGENMKGPAQY 251 (382)
T ss_dssp HCTTSEEEEEC--T-TCCCHHHHHTTHHHHTTCSCEEEEECCSC-SSCHHHHHHHHTT-----CSSCEEECTTCCSHHHH
T ss_pred hCCCCEEEEEC--C-CCCCHHHHHHHHHHHhhccCCeEEECCCC-cccHHHHHHHHhh-----CCCCEEecCCcCCHHHH
Confidence 57777888721 2 233567777778888888 7666532233 2356677778774 78999999654 56667
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
..+++ .+|-|.|.|..+|.-. ...++++.|+++|+++=+|
T Consensus 252 ~~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 252 VPLLSQRCLDIIQPDVMHVNGID----------------------EFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp HHHHHTTCCSEECCCTTTTTHHH----------------------HHHHHHHHHHHHTCEECCC
T ss_pred HHHHHcCCCCEEecCccccCCHH----------------------HHHHHHHHHHHcCCEEeec
Confidence 77765 4999999999998743 5678999999999998877
No 96
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=88.36 E-value=1.2 Score=46.96 Aligned_cols=109 Identities=11% Similarity=0.086 Sum_probs=79.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-+|.|= + | ..-+.+.+++-+++|++.|.+.+==-++ .++.+.+++|+++ +++|+++|=.+ ++.-+.
T Consensus 215 ~G~d~~l~vD-a-n-~~~~~~~ai~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 285 (410)
T 2gl5_A 215 MGDDADIIVE-I-H-SLLGTNSAIQFAKAIEKYRIFLYEEPIH-PLNSDNMQKVSRS-----TTIPIATGERSYTRWGYR 285 (410)
T ss_dssp HCSSSEEEEE-C-T-TCSCHHHHHHHHHHHGGGCEEEEECSSC-SSCHHHHHHHHHH-----CSSCEEECTTCCTTHHHH
T ss_pred cCCCCEEEEE-C-C-CCCCHHHHHHHHHHHHhcCCCeEECCCC-hhhHHHHHHHHhh-----CCCCEEecCCcCCHHHHH
Confidence 4666777762 1 2 2336777788888888888766432232 2457778888886 68999999665 567777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ .+|-|.|.|..+|.-. ...++++.|+++|+++=+|
T Consensus 286 ~~i~~~~~d~v~ik~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h 326 (410)
T 2gl5_A 286 ELLEKQSIAVAQPDLCLCGGIT----------------------EGKKICDYANIYDTTVQVH 326 (410)
T ss_dssp HHHHTTCCSEECCCTTTTTHHH----------------------HHHHHHHHHHTTTCEECCC
T ss_pred HHHHcCCCCEEecCccccCCHH----------------------HHHHHHHHHHHcCCeEeec
Confidence 7775 4999999999998743 5678999999999997554
No 97
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=88.20 E-value=0.92 Score=47.28 Aligned_cols=111 Identities=11% Similarity=0.129 Sum_probs=78.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHH-HHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRI-ADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L-~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (706)
+|.+-||+|=- | ..-|.+.+++-+++| ++.|. .+= -|-. +.+.+.+|+++ +++|+++|=. +++.-+
T Consensus 187 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~~i-~iE--~P~~-~~~~~~~l~~~-----~~iPI~~dE~~~~~~~~ 254 (371)
T 2ps2_A 187 QQPDEFFIVDA--N-GKLSVETALRLLRLLPHGLDF-ALE--APCA-TWRECISLRRK-----TDIPIIYDELATNEMSI 254 (371)
T ss_dssp CCTTCEEEEEC--T-TBCCHHHHHHHHHHSCTTCCC-EEE--CCBS-SHHHHHHHHTT-----CCSCEEESTTCCSHHHH
T ss_pred cCCCCEEEEEC--C-CCcCHHHHHHHHHHHHhhcCC-cCc--CCcC-CHHHHHHHHhh-----CCCCEEeCCCcCCHHHH
Confidence 56666676521 1 233567777777777 77776 543 2322 56667777764 7899999965 467777
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCC
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GS 242 (706)
..+++ .+|-|.|.|+.+|.-. ...++++.|+++|+++=+|..++|
T Consensus 255 ~~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~~~~es 301 (371)
T 2ps2_A 255 VKILADDAAEGIDLKISKAGGLT----------------------RGRRQRDICLAAGYSVSVQETCGS 301 (371)
T ss_dssp HHHHHHTCCSEEEEEHHHHTSHH----------------------HHHHHHHHHHHHTCEEEEECSSCC
T ss_pred HHHHHhCCCCEEEechhhcCCHH----------------------HHHHHHHHHHHcCCeEEecCCCcC
Confidence 77766 4999999999998743 567899999999999988765543
No 98
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=88.11 E-value=1.4 Score=46.40 Aligned_cols=109 Identities=13% Similarity=0.081 Sum_probs=76.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (706)
+|.+-+|.|=- | ..-+.+.+++-+++|++.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+. +.-+.
T Consensus 196 ~G~d~~l~vD~--n-~~~~~~~a~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 266 (392)
T 2poz_A 196 AGPEIELMVDL--S-GGLTTDETIRFCRKIGELDICFVEEPCD-PFDNGALKVISEQ-----IPLPIAVGERVYTRFGFR 266 (392)
T ss_dssp HCTTSEEEEEC--T-TCSCHHHHHHHHHHHGGGCEEEEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCHHHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEECCCC-cccHHHHHHHHhh-----CCCCEEecCCcCCHHHHH
Confidence 45666666621 1 2335677777777788877665432222 2456777788875 689999997764 56666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ .+|-|.|.|..+|.-. ...++++.|+++|+++=+|
T Consensus 267 ~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~h 307 (392)
T 2poz_A 267 KIFELQACGIIQPDIGTAGGLM----------------------ETKKICAMAEAYNMRVAPH 307 (392)
T ss_dssp HHHTTTCCSEECCCTTTSSCHH----------------------HHHHHHHHHHTTTCEECCC
T ss_pred HHHHcCCCCEEecCccccCCHH----------------------HHHHHHHHHHHcCCeEecC
Confidence 6665 4999999999998843 5677999999999988664
No 99
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=88.03 E-value=2.6 Score=40.73 Aligned_cols=158 Identities=13% Similarity=0.058 Sum_probs=91.5
Q ss_pred ceEEEeccCCC--CCCHHHHHHHHHHHHHcCCCEEEEecCCHHH--HHHHHHHHHhhccCCcCcceee----ccCCC---
Q 005248 103 PIRVQTMTTND--TKDVAGTVEEVMRIADQGADLVRITVQGKRE--ADACFEIKNSLVQKNYNIPLVA----DIHFA--- 171 (706)
Q Consensus 103 PI~VQSMt~t~--T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~--A~al~~I~~~L~~~g~~iPLVA----DIHF~--- 171 (706)
.|.+|+.+-++ +.|.+..+ ..++++|.+-|=+...+... ...+.++++.|.+.|+.+..++ ++.+.
T Consensus 3 kig~~~~~~~~~~~~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d 79 (290)
T 2qul_A 3 KVGMFYTYWSTEWMVDFPATA---KRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPD 79 (290)
T ss_dssp CEEEETTSSCSSSCCCHHHHH---HHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSC
T ss_pred ceeEEeeeecCcccccHHHHH---HHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCC
Confidence 36677766444 25665554 45567899999998876433 1567788888888888877664 33332
Q ss_pred HH----------HHHHHh-hh-cCceeeCC----CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 172 PS----------VALRVA-EC-FDKIRVNP----GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 172 ~~----------~Al~a~-~~-~~kiRINP----GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
+. .+++.+ +. +..|++.+ |. . .|. .+....+.++++.+.+.++.+.|+++|+ +
T Consensus 80 ~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~---~--~~~----~~~~~~~~~~~~~~~l~~l~~~a~~~gv--~ 148 (290)
T 2qul_A 80 KSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQ---S--PPL----DMKDKRPYVDRAIESVRRVIKVAEDYGI--I 148 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSC---C--CCT----TCCCCHHHHHHHHHHHHTTHHHHHHHTC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccCCc---c--cCC----CcccHHHHHHHHHHHHHHHHHHHHHcCC--E
Confidence 21 112222 22 66666422 22 0 010 0111234557788888889999999997 4
Q ss_pred Eec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCC
Q 005248 236 IGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (706)
Q Consensus 236 IGv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSn 285 (706)
|++ ||...+. .+..++ -+..+++++.|-.++-+-+=..+
T Consensus 149 l~lEn~~~~~~----~~~~~~-------~~~~~l~~~~~~~~~g~~~D~~h 188 (290)
T 2qul_A 149 YALEVVNRFEQ----WLCNDA-------KEAIAFADAVDSPACKVQLDTFH 188 (290)
T ss_dssp EEEECCCTTTC----SSCCSH-------HHHHHHHHHHCCTTEEEEEEHHH
T ss_pred EEEEeCccccc----cccCCH-------HHHHHHHHHcCCCCEEEEEEchh
Confidence 566 5543210 112233 34556677777777777764444
No 100
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=88.02 E-value=2.3 Score=40.22 Aligned_cols=122 Identities=12% Similarity=0.105 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccCCC--HHH-HHHHhhh-cCce
Q 005248 112 NDTKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIHFA--PSV-ALRVAEC-FDKI 185 (706)
Q Consensus 112 t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~-Al~a~~~-~~ki 185 (706)
-|..|.+.+++.++++. .|.+++=+..|. ..-.+.++.||+. ..++|+.+|.++. ++. +..|+++ ++-|
T Consensus 7 ~D~~~~~~~~~~~~~~~-~~~diie~G~p~~~~~g~~~i~~ir~~----~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v 81 (211)
T 3f4w_A 7 LDELTLPEAMVFMDKVV-DDVDIIEVGTPFLIREGVNAIKAIKEK----YPHKEVLADAKIMDGGHFESQLLFDAGADYV 81 (211)
T ss_dssp ECSCCHHHHHHHHHHHG-GGCSEEEECHHHHHHHTTHHHHHHHHH----CTTSEEEEEEEECSCHHHHHHHHHHTTCSEE
T ss_pred eCCCCHHHHHHHHHHhh-cCccEEEeCcHHHHhccHHHHHHHHHh----CCCCEEEEEEEeccchHHHHHHHHhcCCCEE
Confidence 46778999999999996 799999998865 2334556666653 3478999997665 454 7777776 8888
Q ss_pred eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHH
Q 005248 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265 (706)
Q Consensus 186 RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~ 265 (706)
=+ |+.-+ ++.+.++++.|+++|..+=+.+.+- .| ..+.
T Consensus 82 ~v-~~~~~-----------------------~~~~~~~~~~~~~~g~~~~v~~~~~-----------~t-------~~~~ 119 (211)
T 3f4w_A 82 TV-LGVTD-----------------------VLTIQSCIRAAKEAGKQVVVDMICV-----------DD-------LPAR 119 (211)
T ss_dssp EE-ETTSC-----------------------HHHHHHHHHHHHHHTCEEEEECTTC-----------SS-------HHHH
T ss_pred EE-eCCCC-----------------------hhHHHHHHHHHHHcCCeEEEEecCC-----------CC-------HHHH
Confidence 77 32211 1256779999999997654332110 12 2455
Q ss_pred HHHHHHCCCCcEEEE
Q 005248 266 ARICRKLDFHNFLFS 280 (706)
Q Consensus 266 ~~i~e~~~f~~iviS 280 (706)
++.+.+.|.+-|.+.
T Consensus 120 ~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 120 VRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHTCCEEEEE
T ss_pred HHHHHHcCCCEEEEc
Confidence 666677777755443
No 101
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=87.88 E-value=3.4 Score=40.26 Aligned_cols=159 Identities=11% Similarity=0.104 Sum_probs=92.2
Q ss_pred ceEEEeccCCCC--CCHHHHHHHHHHHHHcCCCEEEEecCCHH--HHHHHHHHHHhhccCCcCcceee----ccCC---C
Q 005248 103 PIRVQTMTTNDT--KDVAGTVEEVMRIADQGADLVRITVQGKR--EADACFEIKNSLVQKNYNIPLVA----DIHF---A 171 (706)
Q Consensus 103 PI~VQSMt~t~T--~Dv~atv~Qi~~L~~aGceiVRvtv~~~~--~A~al~~I~~~L~~~g~~iPLVA----DIHF---~ 171 (706)
.|-+++++-.+. .|.+.. +..++++|.+-|=+...... ..+.++++++.|++.|+.+..+- ++.| +
T Consensus 3 kigi~~~~~~~~~~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d 79 (294)
T 3vni_A 3 KHGIYYAYWEQEWEADYKYY---IEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPD 79 (294)
T ss_dssp CEEEEGGGGCSSSCCCHHHH---HHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSC
T ss_pred eEEEehhhhcCCcCcCHHHH---HHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCC
Confidence 356777765553 355554 45567789999998854321 34567778888888888766521 2222 3
Q ss_pred HHH----------HHHHh-hh-cCcee--eCCCCCCcchhhccccccc-hHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 172 PSV----------ALRVA-EC-FDKIR--VNPGNFADRRAQFEQLEYT-DDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 172 ~~~----------Al~a~-~~-~~kiR--INPGNig~~~k~F~~~~Yt-deeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
+.. +++.+ +. +..|+ +.||. +. .|+ +..+.+.++++.+.+.++.+.|+++|+.+
T Consensus 80 ~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l-- 148 (294)
T 3vni_A 80 PDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYW-PI--------DYTKTIDKKGDWERSVESVREVAKVAEACGVDF-- 148 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEESTTSCS-SC--------CTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEE--
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeeccccCCC-CC--------cCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEE--
Confidence 321 22333 33 77777 34432 10 011 12355677888899999999999999754
Q ss_pred ec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCCh
Q 005248 237 GT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286 (706)
Q Consensus 237 Gv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv 286 (706)
++ ||+.-+ ..+..++ -+..+++++.|-.++-+-+=..+.
T Consensus 149 ~lEn~~~~~----~~~~~~~-------~~~~~l~~~v~~~~vg~~~D~~h~ 188 (294)
T 3vni_A 149 CLEVLNRFE----NYLINTA-------QEGVDFVKQVDHNNVKVMLDTFHM 188 (294)
T ss_dssp EEECCCTTT----CSSCCSH-------HHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred EEEecCccc----CcccCCH-------HHHHHHHHHcCCCCEEEEEEhhhh
Confidence 54 343211 1112333 344567777777777776655443
No 102
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=87.87 E-value=2.8 Score=44.61 Aligned_cols=111 Identities=13% Similarity=0.080 Sum_probs=79.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.|++|= .|. .-|.+.+++-+++|++.|.+.+==-++- .+.+.+..++++ +++|+.+|=.+ ++.-+.
T Consensus 188 ~g~~~~l~vD--aN~-~~~~~~A~~~~~~L~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 258 (393)
T 4dwd_A 188 LGPDAVIGFD--ANN-GYSVGGAIRVGRALEDLGYSWFEEPVQH-YHVGAMGEVAQR-----LDITVSAGEQTYTLQALK 258 (393)
T ss_dssp HCTTCCEEEE--CTT-CCCHHHHHHHHHHHHHTTCSEEECCSCT-TCHHHHHHHHHH-----CSSEEEBCTTCCSHHHHH
T ss_pred hCCCCeEEEE--CCC-CCCHHHHHHHHHHHHhhCCCEEECCCCc-ccHHHHHHHHhh-----CCCCEEecCCcCCHHHHH
Confidence 5677788773 221 2346667777888888888887543431 346677788875 78999999554 455555
Q ss_pred HHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 177 RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 177 ~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
.+++. +|-|.|.|+..|.-. ....+...|+++|+++=+|..
T Consensus 259 ~~i~~~~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 259 DLILSGVRMVQPDIVKMGGIT----------------------GMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HHHHHTCCEECCCTTTTTHHH----------------------HHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHcCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCEEeecCC
Confidence 55433 999999999998733 567899999999999876655
No 103
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=87.87 E-value=1.7 Score=46.60 Aligned_cols=109 Identities=9% Similarity=0.053 Sum_probs=78.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcC-cceeeccCC-CHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYN-IPLVADIHF-APSVA 175 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~-iPLVADIHF-~~~~A 175 (706)
+|.+.+|+|=- | ..-|.+.+++-+++|++.|.+.+==-++ ..+.+.+++|+++ ++ +|+++|=.+ ++.-+
T Consensus 226 vG~d~~l~vDa--n-~~~~~~eai~~~~~L~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~~iPIa~dE~~~~~~~~ 296 (428)
T 3bjs_A 226 LGDEVDILTDA--N-TAYTMADARRVLPVLAEIQAGWLEEPFA-CNDFASYREVAKI-----TPLVPIAAGENHYTRFEF 296 (428)
T ss_dssp HCTTSEEEEEC--T-TCCCHHHHHHHHHHHHHTTCSCEECCSC-TTCHHHHHHHTTT-----CSSSCEEECTTCCSHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEECCCC-ccCHHHHHHHHHh-----CCCCcEEcCCCcCCHHHH
Confidence 57777777621 2 2346777777788888888877542232 2346666777764 67 999999665 56777
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
..+++ .+|-|.|.|..+|.-. ...++++.|+++|+++=+|
T Consensus 297 ~~~i~~~~~d~v~ik~~~~GGit----------------------ea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 297 GQMLDAGAVQVWQPDLSKCGGIT----------------------EGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp HHHHTTCCEEEECCBTTTSSCHH----------------------HHHHHHHHHHHTTCCBCCB
T ss_pred HHHHHhCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCeEEec
Confidence 77775 4999999999998843 4577999999999998777
No 104
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=87.86 E-value=1.7 Score=45.46 Aligned_cols=114 Identities=17% Similarity=0.188 Sum_probs=80.7
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHH
Q 005248 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (706)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (706)
.+|.+.+++|= .|. .-|.+.+++-+++|.+.|.+.+==-++. .+.+.+.+++++ +++|+.+|=. +++.-+
T Consensus 184 ~~g~~~~l~vD--an~-~~~~~~a~~~~~~l~~~~i~~iEqP~~~-~~~~~~~~l~~~-----~~iPia~dE~~~~~~~~ 254 (370)
T 1chr_A 184 SLGSKAYLRVD--VNQ-AWDEQVASVYIPELEALGVELIEQPVGR-ENTQALRRLSDN-----NRVAIMADESLSTLASA 254 (370)
T ss_dssp HSSTTCCEEEE--CTT-CCCTTHHHHHTHHHHTTTEEEEECCSCT-TCHHHHHHHHHH-----SCSEEEESSSCCSHHHH
T ss_pred hcCCCCEEEEE--CCC-CCCHHHHHHHHHHHHhcCCCEEECCCCc-ccHHHHHHHHhh-----CCCCEEeCCCcCCHHHH
Confidence 35777888884 222 1234556666778888886665422332 346678888885 7899999965 456666
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
..+++ ++|-|.+.|+..|.-. ...++...|+++|+++=+|.+++
T Consensus 255 ~~~~~~~~~d~v~~k~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~~~~e 300 (370)
T 1chr_A 255 FDLARDRSVDVFSLKLCNMGGVS----------------------ATQKIAAVAEASGIASYGGTMLD 300 (370)
T ss_dssp HHHHTTTSCSEEEECTTTSCSHH----------------------HHHHHHHHHHHHTCEEEECCSCC
T ss_pred HHHHHcCCCCEEEECccccCCHH----------------------HHHHHHHHHHHcCCeEEecCCCc
Confidence 66665 4999999999999733 56789999999999998776543
No 105
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=87.78 E-value=1.8 Score=41.65 Aligned_cols=102 Identities=15% Similarity=0.139 Sum_probs=67.9
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC-------------HHHHHHHHHHHHhhccCCcCcceeecc
Q 005248 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG-------------KREADACFEIKNSLVQKNYNIPLVADI 168 (706)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~-------------~~~A~al~~I~~~L~~~g~~iPLVADI 168 (706)
-+|.+||++-.+. +.+. .+..++++|.+-|=+.... .-..+.++++++.|++.|+.+..++=.
T Consensus 10 mklg~~~~~~~~~-~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~ 85 (262)
T 3p6l_A 10 WRLGMQSYSFHLF-PLTE---ALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY 85 (262)
T ss_dssp EEEEEEGGGGTTS-CHHH---HHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEEEecccCCC-CHHH---HHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc
Confidence 3577888886653 5554 4556677899999887642 123556788888888899887665321
Q ss_pred CCC-----HHHHHHHhh-h-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 169 HFA-----PSVALRVAE-C-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 169 HF~-----~~~Al~a~~-~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
++ .+.+++.++ . +..|++.||. +.++++.+.|+++|+.+
T Consensus 86 -~~~~~~~~~~~i~~A~~lGa~~v~~~~~~--------------------------~~~~~l~~~a~~~gv~l 131 (262)
T 3p6l_A 86 -VAEKSSDWEKMFKFAKAMDLEFITCEPAL--------------------------SDWDLVEKLSKQYNIKI 131 (262)
T ss_dssp -CCSSTTHHHHHHHHHHHTTCSEEEECCCG--------------------------GGHHHHHHHHHHHTCEE
T ss_pred -CCccHHHHHHHHHHHHHcCCCEEEecCCH--------------------------HHHHHHHHHHHHhCCEE
Confidence 11 233344333 3 8899999971 14567899999999754
No 106
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=87.70 E-value=2.1 Score=46.02 Aligned_cols=110 Identities=8% Similarity=0.017 Sum_probs=81.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.||+|= .| .--+.+.+++-+++|++.|.+.+==-++. .+.+.+.+|+++ +++|+++|=.+ ++.-+.
T Consensus 223 vG~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 293 (424)
T 3v3w_A 223 FGPDIHLLHD--VH-HRLTPIEAARLGKALEPYHLFWMEDAVPA-ENQESFKLIRQH-----TTTPLAVGEVFNSIHDCR 293 (424)
T ss_dssp HCSSSEEEEE--CT-TCCCHHHHHHHHHHHGGGCCSEEECCSCC-SSTTHHHHHHHH-----CCSCEEECTTCCSGGGTH
T ss_pred cCCCCcEEEe--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCCh-HhHHHHHHHHhh-----CCCCEEEccCcCCHHHHH
Confidence 5778888883 22 23467778888899999999888644442 345667888885 78999999543 466666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.+++ ++|-|.|.|+..|.-. ...++...|+++|+++=++.
T Consensus 294 ~~i~~ga~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h~ 335 (424)
T 3v3w_A 294 ELIQNQWIDYIRTTIVHAGGIS----------------------QMRRIADFASLFHVRTGFHG 335 (424)
T ss_dssp HHHHTTCCSEECCCTTTTTHHH----------------------HHHHHHHHHHTTTCEEEECC
T ss_pred HHHHcCCCCeEeecchhcCCHH----------------------HHHHHHHHHHHcCCEEEecC
Confidence 6664 4999999999998733 56789999999999986654
No 107
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=87.67 E-value=8.5 Score=39.91 Aligned_cols=207 Identities=14% Similarity=0.153 Sum_probs=122.9
Q ss_pred eEEEceeecCCCCceEEEeccCCCC--CC---HHHHHHHHHHHHHcCCCEEEEe---c-------------CCHHHHHHH
Q 005248 90 TVMVGNVAIGSEHPIRVQTMTTNDT--KD---VAGTVEEVMRIADQGADLVRIT---V-------------QGKREADAC 148 (706)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T--~D---v~atv~Qi~~L~~aGceiVRvt---v-------------~~~~~A~al 148 (706)
.+++|++.+ .|+|+.-.|+.... .| .+..++--.+.++-|+-+|=.- | -+.+..+.+
T Consensus 8 p~~ig~~~l--~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~ 85 (338)
T 1z41_A 8 PITIKDMTL--KNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGF 85 (338)
T ss_dssp CEEETTEEE--SSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHH
T ss_pred CeeECCEEE--cCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHH
Confidence 477888888 78999999986543 23 5777788888888788776221 1 134556778
Q ss_pred HHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHH
Q 005248 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228 (706)
Q Consensus 149 ~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ak 228 (706)
+++.+...+.|. |+++=++-..+.+... .--+-|-.+-.........+.|.+ |++.+-+.|..-.+.|+
T Consensus 86 ~~~~~~vh~~g~--~i~~QL~h~Gr~~~~~-----~~~~~pS~~~~~~~~~~p~~mt~~----eI~~~i~~~~~aA~~a~ 154 (338)
T 1z41_A 86 AKLTEQVKEQGS--KIGIQLAHAGRKAELE-----GDIFAPSAIAFDEQSATPVEMSAE----KVKETVQEFKQAAARAK 154 (338)
T ss_dssp HHHHHHHHHTTC--EEEEEEECCGGGCCCS-----SCCEESSSCCSSTTSCCCEECCHH----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC--EEEEEecCCCcccCCC-----CCCcCCCCCCCCCCCCCCccCCHH----HHHHHHHHHHHHHHHHH
Confidence 888877777775 6666655444432110 011223333221111123445554 57778888888888888
Q ss_pred HcCC-eEEEecCCCCCchhHH--------HhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCCh-----hHHHHHHH
Q 005248 229 KYGR-AVRIGTNHGSLSDRIM--------SYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP-----VVMVQAYR 294 (706)
Q Consensus 229 e~~~-~IRIGvN~GSL~~~il--------~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv-----~~~i~ayr 294 (706)
+.|. .|-|=..||-|=..++ .+||.+.+.=..-++|-++-.++.= ++.|++|-|-. -...+-+.
T Consensus 155 ~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v--~~pv~vris~~~~~~~g~~~~~~~ 232 (338)
T 1z41_A 155 EAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW--DGPLFVRVSASDYTDKGLDIADHI 232 (338)
T ss_dssp HTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSCEEEEEECCCCSTTSCCHHHHH
T ss_pred HcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc--CCcEEEEecCcccCCCCCCHHHHH
Confidence 8774 5667667776644444 3466555444444555555443321 56788886531 01233455
Q ss_pred HHHHhhhcCCCCCccccc
Q 005248 295 LLVAEMYVHGWDYPLHLG 312 (706)
Q Consensus 295 lla~~~~~eg~~YPLHLG 312 (706)
.+++++++.|.|| ||+.
T Consensus 233 ~~a~~l~~~Gvd~-i~v~ 249 (338)
T 1z41_A 233 GFAKWMKEQGVDL-IDCS 249 (338)
T ss_dssp HHHHHHHHTTCCE-EEEE
T ss_pred HHHHHHHHcCCCE-EEEe
Confidence 5677777778887 6664
No 108
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=87.49 E-value=1 Score=47.12 Aligned_cols=154 Identities=18% Similarity=0.181 Sum_probs=91.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhh-hcCceeeC----CCCCCcc
Q 005248 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVN----PGNFADR 195 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~-~~~kiRIN----PGNig~~ 195 (706)
..+...|+++|+|+|=-| +...+......+++..+++|+|+|++= ..=|+.+++ .++=||-- -||+..-
T Consensus 80 ~~EAqilea~GaD~IDes-----evltpad~~~~I~k~~f~vpfv~~~~~-l~EAlrri~eGA~mIrTtge~gtg~v~~a 153 (291)
T 3o07_A 80 FVEAQIIEALEVDYIDES-----EVLTPADWTHHIEKDKFKVPFVCGAKD-LGEALRRINEGAAMIRTKGEAGTGDVSEA 153 (291)
T ss_dssp HHHHHHHHHTTCSEEEEE-----TTSCCSCSSCCCCGGGCSSCEEEEESS-HHHHHHHHHHTCSEEEECCCTTSCCTHHH
T ss_pred HHHHHHHHHcCCCEEecc-----cCCCHHHHHHHhhhhcCCCcEEeeCCC-HHHHHHHHHCCCCEEEecCcCCCccHHHH
Confidence 788889999999999322 211222233334444688999999985 445555555 49999974 6777543
Q ss_pred hhhcc--------cccc-chHH-HHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHH
Q 005248 196 RAQFE--------QLEY-TDDE-YQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265 (706)
Q Consensus 196 ~k~F~--------~~~Y-tdee-Y~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~ 265 (706)
-+-.. ..-| |++| |.. -..+..-+.-+-+..+.-.+|+=+=.|.|=- ||+ .
T Consensus 154 v~h~r~~~~~i~~l~g~~t~~el~~~-a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~----------Tpe--------d 214 (291)
T 3o07_A 154 VKHIRRITEEIKACQQLKSEDDIAKV-AEEMRVPVSLLKDVLEKGKLPVVNFAAGGVA----------TPA--------D 214 (291)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHH-HHHHTSCHHHHHHHHHHTSCSSCEEBCSSCC----------SHH--------H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhhc-ccccCCCHHHHHHHHHccCCCEEEecCCCCC----------CHH--------H
Confidence 22111 1136 8776 322 1222333433334444445665111244422 332 2
Q ss_pred HHHHHHCCCCcEEEE---EecCChhHHHHHHHHHHHh
Q 005248 266 ARICRKLDFHNFLFS---MKASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 266 ~~i~e~~~f~~iviS---~KaSnv~~~i~ayrlla~~ 299 (706)
+..+-+.|.+-+.|- +|+.||..+.++|+.....
T Consensus 215 A~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~Av~~ 251 (291)
T 3o07_A 215 AALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEATTH 251 (291)
T ss_dssp HHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHHHHh
Confidence 333336899888885 8999999999999988877
No 109
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=87.47 E-value=2.1 Score=45.07 Aligned_cols=112 Identities=8% Similarity=0.077 Sum_probs=80.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-||+|=- | ..-|.+.+++-+++|.+.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 186 ~g~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 256 (397)
T 2qde_A 186 VGDDVDLFIDI--N-GAWTYDQALTTIRALEKYNLSKIEQPLP-AWDLDGMARLRGK-----VATPIYADESAQELHDLL 256 (397)
T ss_dssp HCTTSCEEEEC--T-TCCCHHHHHHHHHHHGGGCCSCEECCSC-TTCHHHHHHHHTT-----CSSCEEESTTCCSHHHHH
T ss_pred hCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhCCCCEEECCCC-hhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 57777776642 2 2336677777788888888887643232 2356677777764 78999999665 566666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
.+++ .+|-|.|.|..+|.-. ...++++.|+++|+++=+|.+.
T Consensus 257 ~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~~~~ 300 (397)
T 2qde_A 257 AIINKGAADGLMIKTQKAGGLL----------------------KAQRWLTLARLANLPVICGCMV 300 (397)
T ss_dssp HHHHHTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHHTCCEEECCCS
T ss_pred HHHHcCCCCEEEEeccccCCHH----------------------HHHHHHHHHHHcCCeEEEecCc
Confidence 6665 4999999999998743 4577999999999999887544
No 110
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=87.47 E-value=4.4 Score=39.84 Aligned_cols=92 Identities=17% Similarity=0.224 Sum_probs=70.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNi 192 (706)
..|.+..++.++++.+.|..+|=++..+....+.++.+++++. ++-+-|+.=++..-+..|+++ +|-| +-|+.
T Consensus 24 ~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~----~~~vgagtvi~~d~~~~A~~aGAd~v-~~p~~- 97 (214)
T 1wbh_A 24 VKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVP----EAIVGAGTVLNPQQLAEVTEAGAQFA-ISPGL- 97 (214)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCT----TSEEEEESCCSHHHHHHHHHHTCSCE-EESSC-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCc----CCEEeeCEEEEHHHHHHHHHcCCCEE-EcCCC-
Confidence 3566777889999999999999999999888889998988742 355667765666777777776 7766 33431
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
+ .++++.|+++|+++=+|+
T Consensus 98 -d--------------------------~~v~~~~~~~g~~~i~G~ 116 (214)
T 1wbh_A 98 -T--------------------------EPLLKAATEGTIPLIPGI 116 (214)
T ss_dssp -C--------------------------HHHHHHHHHSSSCEEEEE
T ss_pred -C--------------------------HHHHHHHHHhCCCEEEec
Confidence 1 368999999999998886
No 111
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=87.45 E-value=1.5 Score=42.56 Aligned_cols=167 Identities=10% Similarity=0.129 Sum_probs=94.2
Q ss_pred HHHHHHHHHHcCCCEEEEec------CCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh-cCceeeCCCC
Q 005248 120 TVEEVMRIADQGADLVRITV------QGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv------~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-~~kiRINPGN 191 (706)
.++.++++.++|++.+=+.. +.... +.++.|++. +++|+++.--. ++.-+..++++ ++.|=+.-..
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~-----~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~ 107 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQA-----MDIKVELSGGIRDDDTLAAALATGCTRVNLGTAA 107 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHH-----CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHh-----cCCcEEEECCcCCHHHHHHHHHcCCCEEEECchH
Confidence 45566888999999988764 33334 667888875 78999875333 46667777776 8877654333
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHH
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK 271 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~ 271 (706)
+.++ ..+.+..+++|..+-+|++.-- .. ...+|-.... .+.+|+++.+++
T Consensus 108 l~~p-------------------------~~~~~~~~~~g~~~~~~l~~~~--g~-v~~~g~~~~~--~~~~e~~~~~~~ 157 (244)
T 1vzw_A 108 LETP-------------------------EWVAKVIAEHGDKIAVGLDVRG--TT-LRGRGWTRDG--GDLYETLDRLNK 157 (244)
T ss_dssp HHCH-------------------------HHHHHHHHHHGGGEEEEEEEET--TE-ECCSSSCCCC--CBHHHHHHHHHH
T ss_pred hhCH-------------------------HHHHHHHHHcCCcEEEEEEccC--CE-EEEcCcccCC--CCHHHHHHHHHh
Confidence 3221 1244455566666777776420 01 1233411000 034667788888
Q ss_pred CCCCcEEEEE-ecCCh--hHHHHHHHHHHHhhhcCCCCCcccccccccCCCCCCchhhHHHHHHHhhc
Q 005248 272 LDFHNFLFSM-KASNP--VVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQD 336 (706)
Q Consensus 272 ~~f~~iviS~-KaSnv--~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~g~~G~IKSavGiG~LL~d 336 (706)
.|++-|.+.- +.-.. ....+.++.+++. .+.|+- -+|=|++.--+-.++..
T Consensus 158 ~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~-----~~ipvi---------a~GGI~~~~d~~~~~~~ 211 (244)
T 1vzw_A 158 EGCARYVVTDIAKDGTLQGPNLELLKNVCAA-----TDRPVV---------ASGGVSSLDDLRAIAGL 211 (244)
T ss_dssp TTCCCEEEEEC-------CCCHHHHHHHHHT-----CSSCEE---------EESCCCSHHHHHHHHTT
T ss_pred CCCCEEEEeccCcccccCCCCHHHHHHHHHh-----cCCCEE---------EECCCCCHHHHHHHHhh
Confidence 9999887752 21100 0124566666665 567753 23445554555555544
No 112
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=87.25 E-value=16 Score=37.89 Aligned_cols=71 Identities=14% Similarity=0.279 Sum_probs=54.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCcee
Q 005248 113 DTKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (706)
Q Consensus 113 ~T~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiR 186 (706)
.-.|.+..++++.++.+.|...+.+-+- ..++.+.++.||+.+ |-++||..|.| |++.-|+..++.+++..
T Consensus 136 ~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~~~~d~~~v~avR~a~---g~~~~l~vDan~~~~~~~a~~~~~~L~~~~ 210 (354)
T 3jva_A 136 GIDEPNVMAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREAV---GFDIKLRLDANQAWTPKDAVKAIQALADYQ 210 (354)
T ss_dssp CSCCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH---CTTSEEEEECTTCSCHHHHHHHHHHTTTSC
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHHHHHc---CCCCeEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 3457899999999999999999999873 357788888888753 56799999987 55666666666666643
No 113
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=87.23 E-value=2.6 Score=43.81 Aligned_cols=112 Identities=13% Similarity=0.233 Sum_probs=78.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+++|= . | ..-+.+. ++-+++|.+.|.+.+==-++ ..+.+.+.+++++ +++|+++|=.+ ++.-+.
T Consensus 180 ~g~~~~l~vD-a-n-~~~~~~~-~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 249 (368)
T 1sjd_A 180 FGDDVLLQVD-A-N-TAYTLGD-APQLARLDPFGLLLIEQPLE-EEDVLGHAELARR-----IQTPICLDESIVSARAAA 249 (368)
T ss_dssp HCTTSEEEEE-C-T-TCCCGGG-HHHHHTTGGGCCSEEECCSC-TTCHHHHHHHHTT-----CSSCEEESTTCCSHHHHH
T ss_pred cCCCceEEEe-c-c-CCCCHHH-HHHHHHHHhcCCCeEeCCCC-hhhHHHHHHHHHh-----CCCCEEECCCcCCHHHHH
Confidence 5677777762 1 1 1224455 66677788888887642232 2456777777774 78999999654 577777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
.+++ .+|-|.|.|..+|.-. ...++++.|+++|+++=+|-+++
T Consensus 250 ~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~~~~e 294 (368)
T 1sjd_A 250 DAIKLGAVQIVNIKPGRVGGYL----------------------EARRVHDVCAAHGIPVWCGGMIE 294 (368)
T ss_dssp HHHHTTCCSEEEECTTTTTSHH----------------------HHHHHHHHHHHTTCCEEECCCCC
T ss_pred HHHHcCCCCEEEecccccCCHH----------------------HHHHHHHHHHHcCCcEEeCCccc
Confidence 7775 4999999999998733 56779999999999975655443
No 114
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=87.20 E-value=7.2 Score=40.68 Aligned_cols=140 Identities=9% Similarity=0.087 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccCCCH---HHHHHHhhh--cCceeeC-
Q 005248 117 VAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHFAP---SVALRVAEC--FDKIRVN- 188 (706)
Q Consensus 117 v~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~---~~Al~a~~~--~~kiRIN- 188 (706)
++.-++=+++|.++|.+.+=+..| ++++.+.++.|++.+. ++.+.|=.--+. +.|++|++. ++.|+|-
T Consensus 27 ~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~----~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~ 102 (325)
T 3eeg_A 27 TEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAVT----RPTICALTRAKEADINIAGEALRFAKRSRIHTGI 102 (325)
T ss_dssp TTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCC----SSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCC----CCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEe
Confidence 455566677899999999999988 4778889999988642 233433322222 455555442 4555541
Q ss_pred CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHH
Q 005248 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARI 268 (706)
Q Consensus 189 PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i 268 (706)
|-+=. |.. ..+..-++..-+++.++|+.||++|..+.+|.-.++ + .+| +-.++.++.
T Consensus 103 s~Sd~-----~~~-----~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~-------~--~~~----~~~~~~~~~ 159 (325)
T 3eeg_A 103 GSSDI-----HIE-----HKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAG-------R--ADQ----AFLARMVEA 159 (325)
T ss_dssp ECSHH-----HHC---------CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGG-------G--SCH----HHHHHHHHH
T ss_pred cccHH-----HHH-----HHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccc-------c--chH----HHHHHHHHH
Confidence 11100 000 001112344456788899999999999887643221 1 233 445567777
Q ss_pred HHHCCCCcEEEEEecCC
Q 005248 269 CRKLDFHNFLFSMKASN 285 (706)
Q Consensus 269 ~e~~~f~~iviS~KaSn 285 (706)
+.+.|-+ .|++|-+.
T Consensus 160 ~~~~G~~--~i~l~DT~ 174 (325)
T 3eeg_A 160 VIEAGAD--VVNIPDTT 174 (325)
T ss_dssp HHHHTCS--EEECCBSS
T ss_pred HHhcCCC--EEEecCcc
Confidence 8888887 57888764
No 115
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=87.16 E-value=4.6 Score=40.13 Aligned_cols=90 Identities=13% Similarity=0.118 Sum_probs=70.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCc
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig~ 194 (706)
|.+..++.++++.+.|..+|=++..+....+.++.+++++. ++-+-|+.=++..-+..|+++ ++-| .-|+. +
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~----~~~igagtvl~~d~~~~A~~aGAd~v-~~p~~--d 108 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRP----ELCVGAGTVLDRSMFAAVEAAGAQFV-VTPGI--T 108 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCT----TSEEEEECCCSHHHHHHHHHHTCSSE-ECSSC--C
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCc----ccEEeeCeEeeHHHHHHHHHCCCCEE-EeCCC--C
Confidence 56677889999999999999999999888888998888742 355666666777778777776 6666 33431 1
Q ss_pred chhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 195 ~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.++++.|+++|+++=+|+
T Consensus 109 --------------------------~~v~~~~~~~g~~~i~G~ 126 (225)
T 1mxs_A 109 --------------------------EDILEAGVDSEIPLLPGI 126 (225)
T ss_dssp --------------------------HHHHHHHHHCSSCEECEE
T ss_pred --------------------------HHHHHHHHHhCCCEEEee
Confidence 358999999999988886
No 116
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=86.94 E-value=4.2 Score=43.75 Aligned_cols=99 Identities=14% Similarity=0.073 Sum_probs=77.6
Q ss_pred CHHHHHHHHHHHHH-cCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeecc--CCCHHHHHHHhh--hcCceeeCC
Q 005248 116 DVAGTVEEVMRIAD-QGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADI--HFAPSVALRVAE--CFDKIRVNP 189 (706)
Q Consensus 116 Dv~atv~Qi~~L~~-aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADI--HF~~~~Al~a~~--~~~kiRINP 189 (706)
|.+..++-+++|.+ .+ |.=|-=| ..++-+.+.++++++ |.++||++|= .+++.-....++ +++-|.|.|
T Consensus 268 t~~~ai~~~~~L~~~~~--i~~iEePl~~~d~~~~~~l~~~~---~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik~ 342 (431)
T 2fym_A 268 TSEEFTHFLEELTKQYP--IVSIEDGLDESDWDGFAYQTKVL---GDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKF 342 (431)
T ss_dssp CHHHHHHHHHHHHHHSC--EEEEESCSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECG
T ss_pred CHHHHHHHHHHHHHhCC--ceEEECCCCcccHHHHHHHHHHh---CCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEECc
Confidence 66777888888887 54 7777655 335678899999864 3489999995 467777777775 499999999
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
..+|.-. ...++++.|+++|+++=+|-++|
T Consensus 343 ~~~GGit----------------------e~~~i~~~A~~~g~~~~~~h~~g 372 (431)
T 2fym_A 343 NQIGSLT----------------------ETLAAIKMAKDAGYTAVISHRSG 372 (431)
T ss_dssp GGTCSHH----------------------HHHHHHHHHHHTTCEEEEECCSS
T ss_pred cccCCHH----------------------HHHHHHHHHHHCCCeEEEeCCCC
Confidence 9999843 45779999999999998887775
No 117
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=86.93 E-value=2.6 Score=41.74 Aligned_cols=155 Identities=10% Similarity=0.054 Sum_probs=91.2
Q ss_pred ceEEEeccCCC---CCCHHHHHHHHHHHHHcCCCEEEEecCCHHH--HHHHHHHHHhhccCCcCcceee----ccCCC--
Q 005248 103 PIRVQTMTTND---TKDVAGTVEEVMRIADQGADLVRITVQGKRE--ADACFEIKNSLVQKNYNIPLVA----DIHFA-- 171 (706)
Q Consensus 103 PI~VQSMt~t~---T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~--A~al~~I~~~L~~~g~~iPLVA----DIHF~-- 171 (706)
.+.+++++-.+ ..+.+. +..++++|.+-|=+...+... ...+.++++.|.+.|+.+...+ ++.|.
T Consensus 22 klg~~~~~~~~~~~~~~l~~----l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~ 97 (309)
T 2hk0_A 22 KHGIYYSYWEHEWSAKFGPY----IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSE 97 (309)
T ss_dssp EEEEEGGGGCSCTTSCSHHH----HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCS
T ss_pred eeEEehhhcccccccccHHH----HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCC
Confidence 45666655433 234443 666778899999888653211 1567788888888888776654 33342
Q ss_pred -HH----------HHHH-Hhhh-cCceeeCC----CCCCcchhhccccccchH-HHHHHHhhHHhhHHHHHHHHHHcCCe
Q 005248 172 -PS----------VALR-VAEC-FDKIRVNP----GNFADRRAQFEQLEYTDD-EYQKELQHIEEVFSPLVEKCKKYGRA 233 (706)
Q Consensus 172 -~~----------~Al~-a~~~-~~kiRINP----GNig~~~k~F~~~~Ytde-eY~~El~~I~~~f~~vv~~ake~~~~ 233 (706)
+. .+++ |.+. +..|++.+ |.+- .+. .+.+.++++.+.+.++.+.|+++|+.
T Consensus 98 d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~-----------~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~ 166 (309)
T 2hk0_A 98 DAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDY-----------SQPVDKAGDYARGVEGINGIADFANDLGIN 166 (309)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCT-----------TSCCCHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccccccC-----------CCcCChHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 21 1222 2233 67777654 3220 011 24556788889999999999999974
Q ss_pred EEEec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCC
Q 005248 234 VRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (706)
Q Consensus 234 IRIGv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSn 285 (706)
|++ |++... . .++.+.-+..+++++.|-.++-+-+=..+
T Consensus 167 --l~lEn~~~~~----~-------~~~~~~~~~~~l~~~v~~~~vg~~~D~~H 206 (309)
T 2hk0_A 167 --LCIEVLNRFE----N-------HVLNTAAEGVAFVKDVGKNNVKVMLDTFH 206 (309)
T ss_dssp --EEEECCCTTT----C-------SSCCSHHHHHHHHHHHTCTTEEEEEEHHH
T ss_pred --EEEeeccccc----c-------cccCCHHHHHHHHHHcCCCCeEEEEehhh
Confidence 565 554321 1 12223345566777777777777664443
No 118
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=86.92 E-value=6.3 Score=38.58 Aligned_cols=163 Identities=15% Similarity=0.085 Sum_probs=84.7
Q ss_pred ceeecCCCCceEEEe----ccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCccee-e--
Q 005248 94 GNVAIGSEHPIRVQT----MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLV-A-- 166 (706)
Q Consensus 94 G~v~IGG~~PI~VQS----Mt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLV-A-- 166 (706)
|-|+....-.+.+|+ ++-.....-..-.+.+..++++|.+-|=+...+... ..+.++++.|++.|..+.-+ +
T Consensus 13 ~~~~~~~~mklg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~-~~~~~~~~~l~~~gl~~~~~~~~~ 91 (290)
T 2zvr_A 13 GLVPRGSHMKLSLVISTSDAAFDALAFKGDLRKGMELAKRVGYQAVEIAVRDPSI-VDWNEVKILSEELNLPICAIGTGQ 91 (290)
T ss_dssp --------CEEEEEECCCC-------CHHHHHHHHHHHHHHTCSEEEEECSCGGG-SCHHHHHHHHHHHTCCEEEEECTH
T ss_pred CcCcCCCCceeEEecccchhhccccccccCHHHHHHHHHHhCCCEEEEcCCCcch-hhHHHHHHHHHHcCCeEEEEeccC
Confidence 334444445667777 322111111222344566778899999998876432 44667788888888887443 3
Q ss_pred -----ccCC---CHH----------HHHHHhh-h-cCceeeCC--CCCCcchhhccccccchHHHHHHHhhHHhhHHHHH
Q 005248 167 -----DIHF---APS----------VALRVAE-C-FDKIRVNP--GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLV 224 (706)
Q Consensus 167 -----DIHF---~~~----------~Al~a~~-~-~~kiRINP--GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv 224 (706)
++.| ++. .+++.++ . +..|+ -| |... +..+.+.++++.+.+.++.
T Consensus 92 p~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~-~~~~g~~~------------~~~~~~~~~~~~~~l~~l~ 158 (290)
T 2zvr_A 92 AYLADGLSLTHPNDEIRKKAIERVVKHTEVAGMFGALVII-GLVRGRRE------------GRSYEETEELFIESMKRLL 158 (290)
T ss_dssp HHHTTCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEE-SGGGCCCT------------TSCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE-ecCCCCCC------------CcCHHHHHHHHHHHHHHHH
Confidence 3333 221 1112222 2 55555 33 3211 1123455677888888888
Q ss_pred HHHHHcCCeEEEec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCC
Q 005248 225 EKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (706)
Q Consensus 225 ~~ake~~~~IRIGv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSn 285 (706)
+.|++ |+|++ |+..-+ -.++.+.-+..+++++.|-.++-+-+=..+
T Consensus 159 ~~a~~----v~l~lEn~~~~~-----------~~~~~~~~~~~~l~~~~~~~~vgl~~D~~h 205 (290)
T 2zvr_A 159 ELTEH----AKFVIEPLNRYE-----------TDFINTIDDALRILRKINSNRVGILADTFH 205 (290)
T ss_dssp HHCSS----CCEEECCCCTTT-----------CSSCCSHHHHHHHHHHHCCTTEEEEEEHHH
T ss_pred HHhcc----CEEEEEeCCCcC-----------ccccCCHHHHHHHHHHcCCCCEEEEEehhH
Confidence 88877 78888 443110 011223345667777777777777765443
No 119
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=86.82 E-value=1 Score=47.47 Aligned_cols=111 Identities=11% Similarity=0.026 Sum_probs=75.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.|++|= .| ..-|.+.+++-+++|++.|. .+==-++ +-+.+..+++ .+++|+++|=. +++.-+.
T Consensus 186 ~g~~~~l~vD--an-~~~~~~~a~~~~~~l~~~~i-~iEqP~~---~~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~ 253 (378)
T 3eez_A 186 REPGEIVLYD--VN-RGWTRQQALRVMRATEDLHV-MFEQPGE---TLDDIAAIRP-----LHSAPVSVDECLVTLQDAA 253 (378)
T ss_dssp CCTTCEEEEE--CT-TCCCHHHHHHHHHHTGGGTC-CEECCSS---SHHHHHHTGG-----GCCCCEEECTTCCSHHHHH
T ss_pred cCCCceEEEE--CC-CCCCHHHHHHHHHHhccCCe-EEecCCC---CHHHHHHHHh-----hCCCCEEECCCCCCHHHHH
Confidence 5666677663 12 12245556666677777775 4422223 3445555555 37899999955 4566666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GS 242 (706)
.+++ .+|-|.|.|+..|.-. .+.++...|+++|+++=+|-+++|
T Consensus 254 ~~l~~~~~d~v~ik~~~~GGit----------------------~~~~ia~~A~~~g~~~~~~~~~es 299 (378)
T 3eez_A 254 RVARDGLAEVFGIKLNRVGGLT----------------------RAARMRDIALTHGIDMFVMATGGS 299 (378)
T ss_dssp HHHHTTCCSEEEEEHHHHTSHH----------------------HHHHHHHHHHHTTCEEEEECSSCS
T ss_pred HHHHcCCCCEEEeCchhcCCHH----------------------HHHHHHHHHHHcCCEEEcCCCCCC
Confidence 6665 4999999999998743 567899999999999999887764
No 120
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=86.56 E-value=1.8 Score=45.61 Aligned_cols=107 Identities=7% Similarity=0.098 Sum_probs=80.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-||+|= .| ..-+.+.+++-+++|++.|.+.+==-++ ..+.+.+.+|+++ +++|+++|=.+ ++.-+.
T Consensus 204 vg~d~~l~vD--an-~~~~~~~a~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 274 (393)
T 2og9_A 204 LGDAVPLMVD--AN-QQWDRPTAQRMCRIFEPFNLVWIEEPLD-AYDHEGHAALALQ-----FDTPIATGEMLTSAAEHG 274 (393)
T ss_dssp HCTTSCEEEE--CT-TCCCHHHHHHHHHHHGGGCCSCEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCSHHHHH
T ss_pred cCCCCEEEEE--CC-CCCCHHHHHHHHHHHHhhCCCEEECCCC-cccHHHHHHHHHh-----CCCCEEeCCCcCCHHHHH
Confidence 5778888883 22 2346788888888899999887643233 2456777888875 68999999654 677777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
.+++ .+|-|.|.|..+|.-. ...++++.|+++|+++=
T Consensus 275 ~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~gi~~~ 313 (393)
T 2og9_A 275 DLIRHRAADYLMPDAPRVGGIT----------------------PFLKIASLAEHAGLMLA 313 (393)
T ss_dssp HHHHTTCCSEECCCHHHHTSHH----------------------HHHHHHHHHHHTTCEEC
T ss_pred HHHHCCCCCEEeeCccccCCHH----------------------HHHHHHHHHHHcCCEEe
Confidence 7765 3999999999998733 56789999999999874
No 121
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=86.54 E-value=1.2 Score=48.06 Aligned_cols=110 Identities=11% Similarity=0.081 Sum_probs=79.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+|.|= .| .--+.+.+++=+++|++.|.+.+==-++- ++.+.+..|+++ +++|+++|=.+ ++.-+.
T Consensus 200 vG~d~~L~vD--an-~~~t~~~A~~~~~~Le~~~i~~iEeP~~~-~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 270 (433)
T 3rcy_A 200 VGDKADLLFG--TH-GQFTTAGAIRLGQAIEPYSPLWYEEPVPP-DNVGAMAQVARA-----VRIPVATGERLTTKAEFA 270 (433)
T ss_dssp HTTSSEEEEC--CC-SCBCHHHHHHHHHHHGGGCCSEEECCSCT-TCHHHHHHHHHH-----SSSCEEECTTCCSHHHHH
T ss_pred hCCCCeEEEe--CC-CCCCHHHHHHHHHHhhhcCCCEEECCCCh-hhHHHHHHHHhc-----cCCCEEecCCCCCHHHHH
Confidence 4666677662 12 12356667777788888888887644442 356778888885 78999999654 466666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.+++ .+|-|++.|+..|.-. ....+...|+.+|+++=++.
T Consensus 271 ~~l~~g~~D~v~~d~~~~GGit----------------------~~~kia~lA~~~gv~~~~h~ 312 (433)
T 3rcy_A 271 PVLREGAAAILQPALGRAGGIW----------------------EMKKVAAMAEVYNAQMAPHL 312 (433)
T ss_dssp HHHHTTCCSEECCCHHHHTHHH----------------------HHHHHHHHHHTTTCEECCCC
T ss_pred HHHHcCCCCEEEeCchhcCCHH----------------------HHHHHHHHHHHcCCEEEecC
Confidence 7765 4999999999998733 56789999999999986553
No 122
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=86.42 E-value=4.7 Score=42.04 Aligned_cols=114 Identities=13% Similarity=0.277 Sum_probs=75.7
Q ss_pred eEEEceeecCCCCc-eEEEeccCCCCCCHHHHHHHHHHHHHc----CCCEEEEe------------cCCHHHHHHHHHHH
Q 005248 90 TVMVGNVAIGSEHP-IRVQTMTTNDTKDVAGTVEEVMRIADQ----GADLVRIT------------VQGKREADACFEIK 152 (706)
Q Consensus 90 ~V~VG~v~IGG~~P-I~VQSMt~t~T~Dv~atv~Qi~~L~~a----GceiVRvt------------v~~~~~A~al~~I~ 152 (706)
.|+||++.+|+++| +.|==.+... |-+...+-.++|.++ |..+|+=+ .++..-.+.|+.++
T Consensus 4 ~~~~~~i~iG~~~~~~vIaGPCsie--~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~ 81 (288)
T 3tml_A 4 SMKLCDFEVGLDQPFFLIAGTCVVE--SEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILS 81 (288)
T ss_dssp CEEETTEEESTTSCCEEEEECSBCC--CHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHH
T ss_pred eEEECCEEECCCCceEEEEeCCcCC--CHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHH
Confidence 58999999999985 5554444433 566776666777665 88877642 22222345555555
Q ss_pred HhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC
Q 005248 153 NSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232 (706)
Q Consensus 153 ~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~ 232 (706)
+..++ ..+|++.++|-...+.. .++.++-+-|--+|+-+ .++++.+-..|+
T Consensus 82 ~~~~e--~Glp~~tev~d~~~v~~-l~~~vd~lkIgA~~~~n--------------------------~~LLr~~a~~gk 132 (288)
T 3tml_A 82 EVKRQ--LGLPVLTDVHSIDEIEQ-VASVVDVLQTPAFLCRQ--------------------------TDFIHACARSGK 132 (288)
T ss_dssp HHHHH--HCCCEEEECCSGGGHHH-HHHHCSEEEECGGGTTC--------------------------HHHHHHHHTSSS
T ss_pred HHHHh--cCCeEEEEeCCHHHHHH-HHHhCCEEEECcccccC--------------------------HHHHHHHHccCC
Confidence 54333 67999999976555544 45679999998888843 236777778999
Q ss_pred eE
Q 005248 233 AV 234 (706)
Q Consensus 233 ~I 234 (706)
||
T Consensus 133 PV 134 (288)
T 3tml_A 133 PV 134 (288)
T ss_dssp CE
T ss_pred cE
Confidence 98
No 123
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=86.38 E-value=1.3 Score=46.84 Aligned_cols=109 Identities=15% Similarity=0.131 Sum_probs=73.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-+|.|=- | ..-|.+.+++-+++|++.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 212 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 282 (407)
T 2o56_A 212 VGPDVDIIAEM--H-AFTDTTSAIQFGRMIEELGIFYYEEPVM-PLNPAQMKQVADK-----VNIPLAAGERIYWRWGYR 282 (407)
T ss_dssp HCTTSEEEEEC--T-TCSCHHHHHHHHHHHGGGCCSCEECSSC-SSSHHHHHHHHHH-----CCSCEEECTTCCHHHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEeCCCC-hhhHHHHHHHHHh-----CCCCEEeCCCcCCHHHHH
Confidence 34555555531 1 2235566666666777777665432222 1345667777775 68999999765 466666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ .+|-|.|.|..+|.-. ...++++.|+++|+++=+|
T Consensus 283 ~~i~~~~~d~v~ik~~~~GGit----------------------e~~~i~~~A~~~g~~~~~h 323 (407)
T 2o56_A 283 PFLENGSLSVIQPDICTCGGIT----------------------EVKKICDMAHVYDKTVQIH 323 (407)
T ss_dssp HHHHTTCCSEECCCTTTTTHHH----------------------HHHHHHHHHHTTTCEECCC
T ss_pred HHHHcCCCCEEecCccccCCHH----------------------HHHHHHHHHHHcCCeEeec
Confidence 7765 4999999999998843 5677999999999997554
No 124
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=86.30 E-value=13 Score=38.49 Aligned_cols=159 Identities=12% Similarity=0.126 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec-------CCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCcee
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITV-------QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIR 186 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv-------~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiR 186 (706)
..++.-++=+.+|.++|.+.+=+.. |-+.+++. +.+.+.+. -++++.+=. -|.+-...|+++ ++.||
T Consensus 25 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~---~~~~~~~~-~~~~~~~l~-~~~~~i~~a~~~g~~~v~ 99 (307)
T 1ydo_A 25 IATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAID---VAKGIDRE-KGVTYAALV-PNQRGLENALEGGINEAC 99 (307)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHH---HHHHSCCC-TTCEEEEEC-CSHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHH---HHHHhhhc-CCCeEEEEe-CCHHhHHHHHhCCcCEEE
Confidence 4678888888999999999999983 43344432 23344332 244554433 255555667776 89898
Q ss_pred eC-CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC-CCCchhHHHhhCC-ChHHHHHHHH
Q 005248 187 VN-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH-GSLSDRIMSYYGD-SPRGMVESAF 263 (706)
Q Consensus 187 IN-PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~-GSL~~~il~rygd-t~eamVeSAl 263 (706)
|- +-|=....+.+. .-.+..-+++.++|+.||++|..+|..+-. -|.++. |. ++ +-.+
T Consensus 100 i~~~~sd~~~~~~l~----------~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~-----~~~~~----~~~~ 160 (307)
T 1ydo_A 100 VFMSASETHNRKNIN----------KSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYE-----KDVPI----EQVI 160 (307)
T ss_dssp EEEESSHHHHHTTTC----------SCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTT-----BCCCH----HHHH
T ss_pred EEeecCHHHHHHHhC----------CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcC-----CCCCH----HHHH
Confidence 63 111000000000 112334456777999999999999855422 111110 22 34 4556
Q ss_pred HHHHHHHHCCCCcEEEEEec----CChhHHHHHHHHHHHh
Q 005248 264 EFARICRKLDFHNFLFSMKA----SNPVVMVQAYRLLVAE 299 (706)
Q Consensus 264 e~~~i~e~~~f~~iviS~Ka----Snv~~~i~ayrlla~~ 299 (706)
+.++.+.+.|-+. |+++- .+|..+-+-.+.|.++
T Consensus 161 ~~~~~~~~~Ga~~--i~l~DT~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 161 RLSEALFEFGISE--LSLGDTIGAANPAQVETVLEALLAR 198 (307)
T ss_dssp HHHHHHHHHTCSC--EEEECSSCCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCE--EEEcCCCCCcCHHHHHHHHHHHHHh
Confidence 6778888889885 45553 4455444444444433
No 125
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=86.21 E-value=1.6 Score=46.68 Aligned_cols=110 Identities=10% Similarity=0.083 Sum_probs=78.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.||+|= .| .--+.+.+++=+++|++.|.+.+==-++. ++.+.+.+|+++ +++|+++|=. +++.-+.
T Consensus 175 vG~d~~L~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~-~d~~~~~~l~~~-----~~iPIa~dE~i~~~~~~~ 245 (405)
T 3rr1_A 175 FGNTVEFGLD--FH-GRVSAPMAKVLIKELEPYRPLFIEEPVLA-EQAETYARLAAH-----THLPIAAGERMFSRFDFK 245 (405)
T ss_dssp TGGGSEEEEE--CC-SCBCHHHHHHHHHHHGGGCCSCEECSSCC-SSTHHHHHHHTT-----CSSCEEECTTCCSHHHHH
T ss_pred hCCCceEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCCc-ccHHHHHHHHhc-----CCCCEEecCCcCCHHHHH
Confidence 4556666663 12 22356667777788888887776543432 245667777764 7899999954 4566777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.+++ ++|-|.|.|+..|.-. ....+...|+++|+++=+|.
T Consensus 246 ~~l~~~a~d~v~~d~~~~GGit----------------------ea~kia~lA~~~gi~v~~h~ 287 (405)
T 3rr1_A 246 RVLEAGGVSILQPDLSHAGGIT----------------------ECVKIAAMAEAYDVALAPHC 287 (405)
T ss_dssp HHHHHCCCSEECCBTTTTTHHH----------------------HHHHHHHHHHTTTCEECCBC
T ss_pred HHHHHhCCCeEEEChhhcCCHH----------------------HHHHHHHHHHHcCCEEEeCC
Confidence 7765 4999999999998733 56789999999999987763
No 126
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=85.95 E-value=1.9 Score=44.77 Aligned_cols=109 Identities=17% Similarity=0.265 Sum_probs=78.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHH--cCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeeccCC-CHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD--QGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHF-APS 173 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~--aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~ 173 (706)
+|.+.+++|=- | ..-|.+.+++-+++|.+ .|.+.+ -=| ...+.+.+.+++++ +++|+++|=.+ ++.
T Consensus 182 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~~~i~~i--EqP~~~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~ 251 (366)
T 1tkk_A 182 VGSAVKLRLDA--N-QGWRPKEAVTAIRKMEDAGLGIELV--EQPVHKDDLAGLKKVTDA-----TDTPIMADESVFTPR 251 (366)
T ss_dssp HCSSSEEEEEC--T-TCSCHHHHHHHHHHHHHTTCCEEEE--ECCSCTTCHHHHHHHHHH-----CSSCEEECTTCCSHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHhhcCCCceEE--ECCCCcccHHHHHHHHhh-----CCCCEEEcCCCCCHH
Confidence 56677776642 2 23367777888888888 554444 422 12456778888875 68999999664 566
Q ss_pred HHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 174 VALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 174 ~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
-+..+++ +++-|.|.|..+|.-. ...++++.|+++|+++=+|.
T Consensus 252 ~~~~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~~ 296 (366)
T 1tkk_A 252 QAFEVLQTRSADLINIKLMKAGGIS----------------------GAEKINAMAEACGVECMVGS 296 (366)
T ss_dssp HHHHHHHHTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHhCCCCEEEeehhhhcCHH----------------------HHHHHHHHHHHcCCcEEecC
Confidence 6777665 4999999999998743 56789999999999997764
No 127
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=85.87 E-value=1.7 Score=46.14 Aligned_cols=111 Identities=6% Similarity=-0.041 Sum_probs=79.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+++|= .| .--+.+.+++-+++|++.|.+.+=--++- ++.+.+.+|+++ +++|+.+|=++ ++.-+.
T Consensus 207 ~g~~~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~-~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 277 (400)
T 4dxk_A 207 VGDKMDIMVE--FH-SMWQLLPAMQIAKALTPYQTFWHEDPIKM-DSLSSLTRYAAV-----SPAPISASETLGSRWAFR 277 (400)
T ss_dssp HGGGSEEEEE--CT-TCBCHHHHHHHHHHTGGGCCSEEECCBCT-TSGGGHHHHHHH-----CSSCEEECTTCCHHHHHH
T ss_pred cCCCceEEEE--CC-CCCCHHHHHHHHHHHhhcCCCEEEcCCCc-ccHHHHHHHHHh-----CCCCEEecCCcCCHHHHH
Confidence 4666677773 22 23467777777888888898887654442 234556777775 78999999655 455666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
.+++ ++|-|.+.|+..|.-. ....+...|+.+|+++=++..
T Consensus 278 ~~l~~~a~d~v~~d~~~~GGit----------------------~~~kia~~A~~~gi~~~~h~~ 320 (400)
T 4dxk_A 278 DLLETGAAGVVMLDISWCGGLS----------------------EARKIASMAEAWHLPVAPHXC 320 (400)
T ss_dssp HHHHTTCCCEEEECTTTTTHHH----------------------HHHHHHHHHHHTTCCEEEC-C
T ss_pred HHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCEEEecCC
Confidence 6655 4999999999998733 567799999999999977643
No 128
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=85.78 E-value=5.1 Score=40.36 Aligned_cols=111 Identities=17% Similarity=0.262 Sum_probs=83.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNi 192 (706)
..|.+..++-+++|.+.|...++||..+..+.+.++.|++++. .+-+-|.-=++..-|..|+++ ++=| +-||-
T Consensus 42 ~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~----~~~iGaGTVlt~~~a~~Ai~AGA~fI-vsP~~- 115 (232)
T 4e38_A 42 IDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQP----EMLIGAGTILNGEQALAAKEAGATFV-VSPGF- 115 (232)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT----TCEEEEECCCSHHHHHHHHHHTCSEE-ECSSC-
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCC----CCEEeECCcCCHHHHHHHHHcCCCEE-EeCCC-
Confidence 3577788899999999999999999999999999999999742 122334556788888888887 5444 66762
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHC
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~ 272 (706)
+ .++++.|+++|+++=.|+. ||. .+..+.+.
T Consensus 116 -~--------------------------~~vi~~~~~~gi~~ipGv~--------------Tpt--------Ei~~A~~~ 146 (232)
T 4e38_A 116 -N--------------------------PNTVRACQEIGIDIVPGVN--------------NPS--------TVEAALEM 146 (232)
T ss_dssp -C--------------------------HHHHHHHHHHTCEEECEEC--------------SHH--------HHHHHHHT
T ss_pred -C--------------------------HHHHHHHHHcCCCEEcCCC--------------CHH--------HHHHHHHc
Confidence 1 3589999999999877773 342 33344688
Q ss_pred CCCcEEE
Q 005248 273 DFHNFLF 279 (706)
Q Consensus 273 ~f~~ivi 279 (706)
|++-+++
T Consensus 147 Gad~vK~ 153 (232)
T 4e38_A 147 GLTTLKF 153 (232)
T ss_dssp TCCEEEE
T ss_pred CCCEEEE
Confidence 9988765
No 129
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=85.68 E-value=2.2 Score=45.46 Aligned_cols=110 Identities=12% Similarity=0.084 Sum_probs=78.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+++|= .|.. -|.+. ++-+++|++.|.+.+===++ .++.+.+..++++ +++|+.+|=.+ ++.-+.
T Consensus 202 ~G~~~~L~vD--aN~~-w~~~~-~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 271 (400)
T 3mwc_A 202 VGDHFPLWTD--ANSS-FELDQ-WETFKAMDAAKCLFHEQPLH-YEALLDLKELGER-----IETPICLDESLISSRVAE 271 (400)
T ss_dssp HCTTSCEEEE--CTTC-CCGGG-HHHHHHHGGGCCSCEESCSC-TTCHHHHHHHHHH-----SSSCEEESTTCCSHHHHH
T ss_pred cCCCCEEEEe--CCCC-CCHHH-HHHHHHHHhcCCCEEeCCCC-hhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 5777888884 2222 23344 67778888999887642233 2346777888885 78999999554 466566
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
.+++ ++|-|.|.|+..|.-. ...++...|+++|+++=+|.+
T Consensus 272 ~~~~~~~~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~~~~ 314 (400)
T 3mwc_A 272 FVAKLGISNIWNIKIQRVGGLL----------------------EAIKIYKIATDNGIKLWGGTM 314 (400)
T ss_dssp HHHHTTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHTTCEEEECCS
T ss_pred HHHhcCCCCEEEEcchhhCCHH----------------------HHHHHHHHHHHcCCEEEecCC
Confidence 6664 4999999999998743 567899999999999866543
No 130
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=85.58 E-value=2.7 Score=44.99 Aligned_cols=111 Identities=10% Similarity=0.001 Sum_probs=81.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.||+|= .| .--+.+.+++=+++|++.|.+.+==-++. .+.+.+.+|+++ +++|+++|=.+ ++.-+.
T Consensus 217 ~G~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 287 (418)
T 3r4e_A 217 YGFDHHLLHD--GH-HRYTPQEAANLGKMLEPYQLFWLEDCTPA-ENQEAFRLVRQH-----TVTPLAVGEIFNTIWDAK 287 (418)
T ss_dssp HCSSSEEEEE--CT-TCSCHHHHHHHHHHHGGGCCSEEESCSCC-SSGGGGHHHHHH-----CCSCEEECTTCCSGGGTH
T ss_pred cCCCCeEEEe--CC-CCCCHHHHHHHHHHHHhhCCCEEECCCCc-cCHHHHHHHHhc-----CCCCEEEcCCcCCHHHHH
Confidence 5777888873 22 23457777888899999998887543432 245567778875 78999999543 466666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
.+++ ++|-|.|.|+..|.-. ...++...|+++|+++=++..
T Consensus 288 ~~l~~~a~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h~~ 330 (418)
T 3r4e_A 288 DLIQNQLIDYIRATVVGAGGLT----------------------HLRRIADLASLYQVRTGCHGP 330 (418)
T ss_dssp HHHHTTCCSEECCCTTTTTHHH----------------------HHHHHHHHHHHTTCEEEECCC
T ss_pred HHHHcCCCCeEecCccccCCHH----------------------HHHHHHHHHHHcCCEEeecCC
Confidence 6665 4999999999998733 567899999999999866653
No 131
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=85.58 E-value=1.6 Score=46.77 Aligned_cols=111 Identities=7% Similarity=0.034 Sum_probs=83.3
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHH
Q 005248 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (706)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (706)
.+|.+.||+|= .| ..-|.+.+++-+++|++.|.+.+==-++ .++.+.+.+|+++ +++|+.+|=+. ++.-+
T Consensus 226 avG~d~~L~vD--aN-~~~~~~~Ai~~~~~Le~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 296 (412)
T 3stp_A 226 VIGYDNDLMLE--CY-MGWNLDYAKRMLPKLAPYEPRWLEEPVI-ADDVAGYAELNAM-----NIVPISGGEHEFSVIGC 296 (412)
T ss_dssp HHCSSSEEEEE--CT-TCSCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHT-----CSSCEEECTTCCSHHHH
T ss_pred HcCCCCeEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCC-cccHHHHHHHHhC-----CCCCEEeCCCCCCHHHH
Confidence 35778888884 22 2346788888889999999988865554 2356778888884 88999999664 46666
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
..+++ ++|-|.|.|+..|.-. ...++...|+++|+++=+|.
T Consensus 297 ~~li~~~a~D~v~ik~~~~GGit----------------------~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 297 AELINRKAVSVLQYDTNRVGGIT----------------------AAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHHHTTCCSEECCCHHHHTHHH----------------------HHHHHHHHHHHHTCCBCCSS
T ss_pred HHHHHcCCCCEEecChhhcCCHH----------------------HHHHHHHHHHHcCCEEEecc
Confidence 66665 4999999999998733 56789999999999875543
No 132
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=85.55 E-value=9.2 Score=43.12 Aligned_cols=201 Identities=13% Similarity=0.142 Sum_probs=121.2
Q ss_pred CHHHHHHHHHHHHHcC-----CCEEEEec----CC------HHHHHHHHHHHHhhcc----CCcCcceeeccCCCHHHHH
Q 005248 116 DVAGTVEEVMRIADQG-----ADLVRITV----QG------KREADACFEIKNSLVQ----KNYNIPLVADIHFAPSVAL 176 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aG-----ceiVRvtv----~~------~~~A~al~~I~~~L~~----~g~~iPLVADIHF~~~~Al 176 (706)
|.++.+++++++.++| ++|+=|=. |+ .+|.+.+-.+.+.+++ .-.++||.-|- |++.+|.
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT-~~a~Vae 325 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDT-YRSNVAK 325 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEEC-CCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeC-CcHHHHH
Confidence 8999999999999999 99999985 33 5666555555555654 22478999996 7899999
Q ss_pred HHhhh-cCcee-eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHc-CCeEEEecCCCCCchhHHH--hh
Q 005248 177 RVAEC-FDKIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY-GRAVRIGTNHGSLSDRIMS--YY 251 (706)
Q Consensus 177 ~a~~~-~~kiR-INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~-~~~IRIGvN~GSL~~~il~--ry 251 (706)
+|+++ ++=|= |+=|+. +. .+.+.|+++ |+|+=+--+.|- ++.+-+ .|
T Consensus 326 aAl~aGadIINDVsg~~~-d~--------------------------~m~~vva~~~~~~vVlmH~rG~-p~tm~~~~~y 377 (545)
T 2bmb_A 326 EAIKVGVDIINDISGGLF-DS--------------------------NMFAVIAENPEICYILSHTRGD-ISTMNRLAHY 377 (545)
T ss_dssp HHHHTTCCEEEETTTTSS-CT--------------------------THHHHHHTCTTSEEEEECCCSC-TTTGGGCCCC
T ss_pred HHHHcCCCEEEeCCCCcC-Ch--------------------------HHHHHHHHhCCCeEEEECCCCC-CCCccccccc
Confidence 99987 44332 223332 21 367888999 999976655553 222111 24
Q ss_pred CCC----------------------------hHHHHHHHHHHHHHHHHCCCC--cEEEEEe---cCChh---HHHHHHHH
Q 005248 252 GDS----------------------------PRGMVESAFEFARICRKLDFH--NFLFSMK---ASNPV---VMVQAYRL 295 (706)
Q Consensus 252 gdt----------------------------~eamVeSAle~~~i~e~~~f~--~iviS~K---aSnv~---~~i~ayrl 295 (706)
.+. -+.+.+...+.++.|++.|+. +|+|--= +.+.. .+++..+.
T Consensus 378 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vv~~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~Kt~~~nl~lL~~l~~ 457 (545)
T 2bmb_A 378 ENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPI 457 (545)
T ss_dssp SSCTTTTTEEEEEETTEEGGGSTTHHHHCHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHH
T ss_pred cccccccccchhccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCcccChHHHHHHHHHHHH
Confidence 321 144555666778899999995 7887531 11222 33444444
Q ss_pred HHHh---hhcC-------CCCCcccccccccCC-----C---CCCchhhHHHHHHHhhcCCCceeEEe
Q 005248 296 LVAE---MYVH-------GWDYPLHLGVTEAGE-----G---EDGRMKSAIGIGTLLQDGLGDTIRVS 345 (706)
Q Consensus 296 la~~---~~~e-------g~~YPLHLGVTEAG~-----g---~~G~IKSavGiG~LL~dGIGDTIRVS 345 (706)
|.+. +..+ -..||+=+|+.==.. | .+-|+-.+++..++....=-|-|||-
T Consensus 458 l~~~~~~~~~~~~~~~~~~~g~PvLvG~SRKsFig~l~g~~~~~~R~~~T~a~~~~a~~~Ga~IvRVH 525 (545)
T 2bmb_A 458 LKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKKFIGHITKDVDAKQRDFATGAVVASCIGFGSDMVRVH 525 (545)
T ss_dssp HTTEEEEEEETTEEEEEECTTCCBEECCTTCHHHHHHHTCCSGGGGHHHHHHHHHHHHHTTCSEEEES
T ss_pred HHhhhccccccccccccccCCCCEEEEeccHHHHHHhcCCCChHHhhHHHHHHHHHHHHCCCcEEEcC
Confidence 4331 0000 136999999754111 2 23455555544444333325777764
No 133
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=85.34 E-value=2.5 Score=42.39 Aligned_cols=110 Identities=17% Similarity=0.188 Sum_probs=70.8
Q ss_pred CCceEEEeccCCCC--C-CHHHHHHHHHHHHHcCCCEEEEec-----CCHHHHHHHHHHHHhhccCCcCcceeeccCCCH
Q 005248 101 EHPIRVQTMTTNDT--K-DVAGTVEEVMRIADQGADLVRITV-----QGKREADACFEIKNSLVQKNYNIPLVADIHFAP 172 (706)
Q Consensus 101 ~~PI~VQSMt~t~T--~-Dv~atv~Qi~~L~~aGceiVRvtv-----~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~ 172 (706)
..+|.||+.|-.+. . |.+. .+..++++|.+-|=+.. +...+ ..++++.|++.|..++.+ |+.+
T Consensus 12 ~~~~g~~~~s~~~~~~~~~~~~---~l~~~a~~G~~~VEl~~~~~~~~~~~~---~~~~~~~l~~~GL~v~~~---~~~~ 82 (303)
T 3l23_A 12 GKEIGLQIYSLSQELYKGDVAA---NLRKVKDMGYSKLELAGYGKGAIGGVP---MMDFKKMAEDAGLKIISS---HVNP 82 (303)
T ss_dssp CCCCEEEGGGGGGGGGSSCHHH---HHHHHHHTTCCEEEECCEETTEETTEE---HHHHHHHHHHTTCEEEEE---ECCC
T ss_pred CCceEEEEEEchhhhccCCHHH---HHHHHHHcCCCEEEeccccCcccCCCC---HHHHHHHHHHcCCeEEEE---eccc
Confidence 46789998877664 2 5554 45567788999998876 23223 466777777888877654 3211
Q ss_pred ---------------------H-------HHHHHh-hh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHH
Q 005248 173 ---------------------S-------VALRVA-EC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSP 222 (706)
Q Consensus 173 ---------------------~-------~Al~a~-~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~ 222 (706)
. .+++.+ +. +..|++. +. . .. .+ .+.+++..+.+.+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~-~~--~-~~------~~----~~~~~~~~~~l~~ 148 (303)
T 3l23_A 83 VDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQP-MM--P-TI------TT----HDEAKLVCDIFNQ 148 (303)
T ss_dssp BCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEEC-SC--C-CC------CS----HHHHHHHHHHHHH
T ss_pred ccccccCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEEC-CC--C-CC------CC----HHHHHHHHHHHHH
Confidence 1 122333 33 8888884 31 1 10 12 2456788889999
Q ss_pred HHHHHHHcCCe
Q 005248 223 LVEKCKKYGRA 233 (706)
Q Consensus 223 vv~~ake~~~~ 233 (706)
+.+.|+++|+.
T Consensus 149 l~~~a~~~Gv~ 159 (303)
T 3l23_A 149 ASDVIKAEGIA 159 (303)
T ss_dssp HHHHHHHTTCT
T ss_pred HHHHHHHCCCc
Confidence 99999999986
No 134
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=85.30 E-value=1.1 Score=46.61 Aligned_cols=110 Identities=15% Similarity=0.251 Sum_probs=75.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHH-HHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTV-EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv-~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (706)
+|.+.||+|=- | ..-|.+.++ +-+++|++.|.+.+==-++ ..+.+.+.+++++ +++|+++|=.+ ++.-+
T Consensus 182 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPI~~dE~~~~~~~~ 252 (369)
T 2p8b_A 182 VGNDIAIRVDV--N-QGWKNSANTLTALRSLGHLNIDWIEQPVI-ADDIDAMAHIRSK-----TDLPLMIDEGLKSSREM 252 (369)
T ss_dssp HCTTSEEEEEC--T-TTTBSHHHHHHHHHTSTTSCCSCEECCBC-TTCHHHHHHHHHT-----CCSCEEESTTCCSHHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHHhCCCcEEECCCC-cccHHHHHHHHHh-----CCCCEEeCCCCCCHHHH
Confidence 46666666532 1 122345555 6666777777776532122 2345667777774 68999999664 67777
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
..+++ .+|-|.|.|+.+|.-. .+.++++.|+++|+++=+|.
T Consensus 253 ~~~i~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~g~~~~~~~ 295 (369)
T 2p8b_A 253 RQIIKLEAADKVNIKLMKCGGIY----------------------PAVKLAHQAEMAGIECQVGS 295 (369)
T ss_dssp HHHHHHTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHhCCCCEEEeecchhCCHH----------------------HHHHHHHHHHHcCCcEEecC
Confidence 77776 4999999999998743 56789999999999986653
No 135
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=85.17 E-value=3.2 Score=43.64 Aligned_cols=109 Identities=10% Similarity=0.011 Sum_probs=79.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+|+|=- | ..-|.+.+++-+++|++.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 207 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 277 (392)
T 1tzz_A 207 IGKDAQLAVDA--N-GRFNLETGIAYAKMLRDYPLFWYEEVGD-PLDYALQAALAEF-----YPGPMATGENLFSHQDAR 277 (392)
T ss_dssp HTTTCEEEEEC--T-TCCCHHHHHHHHHHHTTSCCSEEECCSC-TTCHHHHHHHTTT-----CCSCEEECTTCCSHHHHH
T ss_pred cCCCCeEEEEC--C-CCCCHHHHHHHHHHHHHcCCCeecCCCC-hhhHHHHHHHHhh-----CCCCEEECCCCCCHHHHH
Confidence 67777888722 2 2336777788888888888887532222 2456667777764 78999999665 567666
Q ss_pred HHhh------hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCe---EEEe
Q 005248 177 RVAE------CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRA---VRIG 237 (706)
Q Consensus 177 ~a~~------~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~---IRIG 237 (706)
.+++ .++-|.|.|..+|.-. ...++++.|+++|++ +=+|
T Consensus 278 ~~i~~~~~~~~~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 278 NLLRYGGMRPDRDWLQFDCALSYGLC----------------------EYQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHSCCCTTTCEECCCTTTTTCHH----------------------HHHHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHcCCCccCCcEEEECccccCCHH----------------------HHHHHHHHHHHCCCCCceEeec
Confidence 6665 7899999999998843 567799999999998 6555
No 136
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=84.96 E-value=2 Score=46.21 Aligned_cols=109 Identities=9% Similarity=-0.028 Sum_probs=80.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.||+|= .| .--+.+.+++-+++|++.|.+.+==-++- .+.+.+.+|+++ +++|+++|=.+ ++.-+.
T Consensus 224 ~G~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 294 (425)
T 3vcn_A 224 LGWDVHLLHD--VH-HRLTPIEAARLGKDLEPYRLFWLEDSVPA-ENQAGFRLIRQH-----TTTPLAVGEIFAHVWDAK 294 (425)
T ss_dssp HCSSSEEEEE--CT-TCCCHHHHHHHHHHHGGGCCSEEECCSCC-SSTTHHHHHHHH-----CCSCEEECTTCCSGGGTH
T ss_pred cCCCCEEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCCh-hhHHHHHHHHhc-----CCCCEEeCCCcCCHHHHH
Confidence 5777888873 22 23467778888899999999888644442 345667888885 78999999554 466666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ ++|-|.|.|+..|.-. ....+...|+++|+++=++
T Consensus 295 ~~i~~~a~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h 335 (425)
T 3vcn_A 295 QLIEEQLIDYLRATVLHAGGIT----------------------NLKKIAAFADLHHVKTGCH 335 (425)
T ss_dssp HHHHTTCCSEECCCTTTTTHHH----------------------HHHHHHHHHGGGTCEECCC
T ss_pred HHHHcCCCCeEecChhhcCCHH----------------------HHHHHHHHHHHcCCEEeec
Confidence 6665 4999999999998733 5678999999999987433
No 137
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=84.95 E-value=2 Score=41.89 Aligned_cols=142 Identities=13% Similarity=0.032 Sum_probs=82.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC----H----------HHHHH-Hh
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA----P----------SVALR-VA 179 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~----~----------~~Al~-a~ 179 (706)
.+.+..++ .++++|.+-|=+..+.. .+.++++.|++.|+.+..+ ||. + +.+++ |.
T Consensus 31 ~~~~~~l~---~~~~~G~~~vEl~~~~~----~~~~~~~~l~~~gl~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~a~ 100 (301)
T 3cny_A 31 NNLQQLLS---DIVVAGFQGTEVGGFFP----GPEKLNYELKLRNLEIAGQ---WFSSYIIRDGIEKASEAFEKHCQYLK 100 (301)
T ss_dssp CCHHHHHH---HHHHHTCCEECCCTTCC----CHHHHHHHHHHTTCEECEE---EEEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHH---HHHHhCCCEEEecCCCC----CHHHHHHHHHHCCCeEEEE---eccCCCChhhHHHHHHHHHHHHHHHH
Confidence 45665555 45567988887764432 4667888888888887766 553 1 12223 33
Q ss_pred hh-cCceeeCCCCC---CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CCCCCchhHHHhhCCC
Q 005248 180 EC-FDKIRVNPGNF---ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDS 254 (706)
Q Consensus 180 ~~-~~kiRINPGNi---g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~GSL~~~il~rygdt 254 (706)
+. +..|++.|+.+ |.....|...... ...+.++++.+.+.++.+.|+++|+ +|++ ||.. .+..+
T Consensus 101 ~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~a~~~gv--~l~lE~~~~-------~~~~~ 169 (301)
T 3cny_A 101 AINAPVAVVSEQTYTIQRSDTANIFKDKPY--FTDKEWDEVCKGLNHYGEIAAKYGL--KVAYHHHMG-------TGIQT 169 (301)
T ss_dssp HTTCCEEEEEECTTCCTTCSSCCTTTCCCC--CCHHHHHHHHHHHHHHHHHHHHTTC--EEEEECCTT-------SSSCS
T ss_pred HcCCCEEEecCCCccccCcccCCccccccc--CcHHHHHHHHHHHHHHHHHHHHcCC--EEEEecCCC-------cccCC
Confidence 33 88899988432 2110001100000 0234567788889999999999996 5566 4421 12233
Q ss_pred hHHHHHHHHHHHHHHHHCCCCcEEEEEecC
Q 005248 255 PRGMVESAFEFARICRKLDFHNFLFSMKAS 284 (706)
Q Consensus 255 ~eamVeSAle~~~i~e~~~f~~iviS~KaS 284 (706)
+ -+..+++++.|-.++-+-+=..
T Consensus 170 ~-------~~~~~l~~~~~~~~vg~~~D~~ 192 (301)
T 3cny_A 170 K-------EETDRLMANTDPKLVGLLYDTG 192 (301)
T ss_dssp H-------HHHHHHHHTSCTTTCEEEEEHH
T ss_pred H-------HHHHHHHHhCCccceeEEechH
Confidence 3 3566778888776677765433
No 138
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=84.93 E-value=4 Score=42.64 Aligned_cols=133 Identities=18% Similarity=0.227 Sum_probs=80.5
Q ss_pred EceeecC--CCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe----cCCHHH----HHHHHHHHHhhccCCcCc
Q 005248 93 VGNVAIG--SEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT----VQGKRE----ADACFEIKNSLVQKNYNI 162 (706)
Q Consensus 93 VG~v~IG--G~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvt----v~~~~~----A~al~~I~~~L~~~g~~i 162 (706)
++.-.+| |..|..+-+ .+..|.+..++. ++++|++-|=+. .|.... .+.+.++++.|.+.|+.+
T Consensus 12 ~~~w~~~~~~~~~f~~~~---~p~~~~~e~l~~---aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i 85 (387)
T 1bxb_A 12 FGLWTVGNVGRDPFGDAV---RERLDPVYVVHK---LAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKV 85 (387)
T ss_dssp EEHHHHTCCCCBTTBCCC---SCCCCHHHHHHH---HHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBC
T ss_pred eeeccccCCCCCCCCCCC---CCCCCHHHHHHH---HHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEE
Confidence 4444555 334443222 234566665554 556699999998 664321 467788888888989887
Q ss_pred ceee----------c---cCCCHH----------HHHH-Hhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHH
Q 005248 163 PLVA----------D---IHFAPS----------VALR-VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217 (706)
Q Consensus 163 PLVA----------D---IHF~~~----------~Al~-a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~ 217 (706)
+-+. | .|-++. .+++ |.+. +..|.+.||.-|.. + .....+.+.++++.
T Consensus 86 ~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~---~----~~~~~~~~~~~~~~ 158 (387)
T 1bxb_A 86 PMVTANLFSDPAFKDGAFTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAE---V----EATGKARKVWDWVR 158 (387)
T ss_dssp CEEECCCSSSGGGGGCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEES---C----GGGCGGGTHHHHHH
T ss_pred EEEecCCCCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCcc---C----CccCCHHHHHHHHH
Confidence 7443 1 122231 1222 2233 78899999854320 0 00123456778899
Q ss_pred hhHHHHHHHHHHcCCeEEEec
Q 005248 218 EVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 218 ~~f~~vv~~ake~~~~IRIGv 238 (706)
+.+.++.+.|+++|--|||++
T Consensus 159 e~L~~l~~~a~~~g~gv~l~l 179 (387)
T 1bxb_A 159 EALNFMAAYAEDQGYGYRFAL 179 (387)
T ss_dssp HHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEE
Confidence 999999999999944457777
No 139
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=84.87 E-value=2.7 Score=46.23 Aligned_cols=99 Identities=16% Similarity=0.249 Sum_probs=66.7
Q ss_pred HHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHhhccCCc-CcceeeccCCCHHHHHHHhhh-cCceee--CCCCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAEC-FDKIRV--NPGNF 192 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~---~~A~al~~I~~~L~~~g~-~iPLVADIHF~~~~Al~a~~~-~~kiRI--NPGNi 192 (706)
+.+.+.+|.++|+++|=|.+-.. ...+.+++|++. + ++|+++---.++..|..++++ +|.|.+ -||..
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~-----~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~ 306 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA-----YPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSI 306 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH-----CTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTT
T ss_pred hHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH-----CCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcC
Confidence 47788999999999998876443 445777778775 4 689988544567888888887 999997 47776
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
...+. +...- ..--+.+.++++.|++.++||
T Consensus 307 ~~tr~-~~g~g----------~p~~~~i~~v~~~~~~~~iPV 337 (496)
T 4fxs_A 307 CTTRI-VTGVG----------VPQITAIADAAGVANEYGIPV 337 (496)
T ss_dssp BCHHH-HHCCC----------CCHHHHHHHHHHHHGGGTCCE
T ss_pred ccccc-ccCCC----------ccHHHHHHHHHHHhccCCCeE
Confidence 43211 00000 000124566778888889998
No 140
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=84.70 E-value=2.7 Score=44.44 Aligned_cols=107 Identities=10% Similarity=0.169 Sum_probs=79.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-||+|=- | ..-+.+.+++-+++|++.|.+.+==-++ ..+.+.+.+|+++ +++|+++|=.+ ++.-+.
T Consensus 217 vG~d~~l~vDa--n-~~~~~~~ai~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 287 (398)
T 2pp0_A 217 LGDEFPLMVDA--N-QQWDRETAIRMGRKMEQFNLIWIEEPLD-AYDIEGHAQLAAA-----LDTPIATGEMLTSFREHE 287 (398)
T ss_dssp HCSSSCEEEEC--T-TCSCHHHHHHHHHHHGGGTCSCEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCSHHHHH
T ss_pred cCCCCeEEEEC--C-CCCCHHHHHHHHHHHHHcCCceeeCCCC-hhhHHHHHHHHhh-----CCCCEEecCCcCCHHHHH
Confidence 57778887731 2 2346777888888899999887643333 2456777888886 68999999654 677777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
.+++ .+|-|.|.|..+|.-. ...++++.|+++|+++=
T Consensus 288 ~~i~~~~~d~v~ik~~~~GGit----------------------e~~~i~~~A~~~gi~~~ 326 (398)
T 2pp0_A 288 QLILGNASDFVQPDAPRVGGIS----------------------PFLKIMDLAAKHGRKLA 326 (398)
T ss_dssp HHHHTTCCSEECCCHHHHTSHH----------------------HHHHHHHHHHHTTCEEC
T ss_pred HHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCeEe
Confidence 7765 3999999999998733 56789999999999874
No 141
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=84.68 E-value=4.3 Score=41.12 Aligned_cols=149 Identities=14% Similarity=0.145 Sum_probs=85.3
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH-HHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHH
Q 005248 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALR 177 (706)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~-~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~ 177 (706)
+.|+-+.=|.+.. +. -+..++++||++|=|-.-.. .-.+.+..||+ .|..+=+ .++ .....+..
T Consensus 86 ~~~ldvHLmv~~p----~~---~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~----~G~k~Gv--alnp~Tp~e~l~~ 152 (246)
T 3inp_A 86 TAGMDVHLMVKPV----DA---LIESFAKAGATSIVFHPEASEHIDRSLQLIKS----FGIQAGL--ALNPATGIDCLKY 152 (246)
T ss_dssp CSCEEEEEECSSC----HH---HHHHHHHHTCSEEEECGGGCSCHHHHHHHHHT----TTSEEEE--EECTTCCSGGGTT
T ss_pred CCeEEEEEeeCCH----HH---HHHHHHHcCCCEEEEccccchhHHHHHHHHHH----cCCeEEE--EecCCCCHHHHHH
Confidence 4688888886554 33 46778899999987753321 22355666655 4664332 243 22233223
Q ss_pred HhhhcCce---eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCC
Q 005248 178 VAECFDKI---RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254 (706)
Q Consensus 178 a~~~~~ki---RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt 254 (706)
-++.+|-| -+||| +|..+ |.... ++ +++++-+.+.++|..++|-|-.| ++.+
T Consensus 153 ~l~~vD~VlvMsV~PG-fgGQ~--fi~~~---------l~----KI~~lr~~~~~~~~~~~I~VDGG-I~~~-------- 207 (246)
T 3inp_A 153 VESNIDRVLIMSVNPG-FGGQK--FIPAM---------LD----KAKEISKWISSTDRDILLEIDGG-VNPY-------- 207 (246)
T ss_dssp TGGGCSEEEEECSCTT-C--CC--CCTTH---------HH----HHHHHHHHHHHHTSCCEEEEESS-CCTT--------
T ss_pred HHhcCCEEEEeeecCC-CCCcc--cchHH---------HH----HHHHHHHHHHhcCCCeeEEEECC-cCHH--------
Confidence 33345655 57999 55422 54222 33 44456667777787778877444 3322
Q ss_pred hHHHHHHHHHHHHHHHHCCCCcEEEE---EecCChhHHHHHHHHHH
Q 005248 255 PRGMVESAFEFARICRKLDFHNFLFS---MKASNPVVMVQAYRLLV 297 (706)
Q Consensus 255 ~eamVeSAle~~~i~e~~~f~~iviS---~KaSnv~~~i~ayrlla 297 (706)
.++.|.+.|-+-+|+- .|+.|+...++..|...
T Consensus 208 ----------ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i 243 (246)
T 3inp_A 208 ----------NIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDEL 243 (246)
T ss_dssp ----------THHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred ----------HHHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHHH
Confidence 4556667776655552 47778877776666543
No 142
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=84.51 E-value=2.6 Score=44.11 Aligned_cols=150 Identities=15% Similarity=0.153 Sum_probs=89.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEe----cCCHH----HHHHHHHHHHhhccCCcCcceeecc----------CC---C
Q 005248 113 DTKDVAGTVEEVMRIADQGADLVRIT----VQGKR----EADACFEIKNSLVQKNYNIPLVADI----------HF---A 171 (706)
Q Consensus 113 ~T~Dv~atv~Qi~~L~~aGceiVRvt----v~~~~----~A~al~~I~~~L~~~g~~iPLVADI----------HF---~ 171 (706)
+..|.+..++. ++++|.+-|=+. .|... ..+.+.+|++.|.+.|+.++-+.=- .| +
T Consensus 31 ~~~~~~e~l~~---aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~spd 107 (393)
T 1xim_A 31 TALDPVEAVHK---LAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPMVTTNLFTHPVFKDGGFTSND 107 (393)
T ss_dssp CCCCHHHHHHH---HHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSS
T ss_pred CCCCHHHHHHH---HHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEEEEecCCcCCcccccCCCCCCC
Confidence 34566665544 556699999998 66432 2567888888899999988755321 22 2
Q ss_pred HH----------HHHH-Hhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-
Q 005248 172 PS----------VALR-VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT- 238 (706)
Q Consensus 172 ~~----------~Al~-a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv- 238 (706)
+. .+++ |.+. +..|.+.||..|.. + +....+.+.++++.+.+.++.+.|+++|--|||++
T Consensus 108 ~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~---~----~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~l~lE 180 (393)
T 1xim_A 108 RSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAE---Y----DSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIE 180 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEES---S----GGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCCc---C----CccCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 21 1112 2233 88899999864321 0 01223567789999999999999999844456676
Q ss_pred CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCc-EEEEE
Q 005248 239 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHN-FLFSM 281 (706)
Q Consensus 239 N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~-iviS~ 281 (706)
|+..-+. +-.++.+.-+.++++++.|-.+ +.+-+
T Consensus 181 ~~~~~~~---------~~~~~~t~~~~~~ll~~v~~~~~vgl~l 215 (393)
T 1xim_A 181 PKPNEPR---------GDILLPTAGHAIAFVQELERPELFGINP 215 (393)
T ss_dssp CCSSSSS---------SEESSCSHHHHHHHHTTSSSGGGEEECC
T ss_pred cCCCCCC---------CCCcCCCHHHHHHHHHHhCCccceEEEE
Confidence 3421110 0012223334455667777666 65544
No 143
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=84.50 E-value=0.6 Score=47.33 Aligned_cols=165 Identities=10% Similarity=0.036 Sum_probs=94.4
Q ss_pred EEEceeecCCCCceEEEeccCC---CCCCHHHHHHHHHHHHHc-CCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceee
Q 005248 91 VMVGNVAIGSEHPIRVQTMTTN---DTKDVAGTVEEVMRIADQ-GADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA 166 (706)
Q Consensus 91 V~VG~v~IGG~~PI~VQSMt~t---~T~Dv~atv~Qi~~L~~a-GceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVA 166 (706)
..+|...+|. ++.|+... +..|++.+ +.+++++ |.+-|=+..|... .+.+.++++.|.+.|..+..+.
T Consensus 10 ~~~~~w~~~~----~~~~f~~~g~~~~~~~~e~---l~~aa~~~G~~~VEl~~~~~~-~~~~~~l~~~l~~~Gl~i~~~~ 81 (333)
T 3ktc_A 10 FGAGLWHFAN----YIDRYAVDGYGPALSTIDQ---INAAKEVGELSYVDLPYPFTP-GVTLSEVKDALKDAGLKAIGIT 81 (333)
T ss_dssp EEEEGGGGSC----CCCSSSTTCSSCCCCHHHH---HHHHHHHSSEEEEEEEESCST-TCCHHHHHHHHHHHTCEEEEEE
T ss_pred ceeeeeeeec----ccccccCCCCCCCCCHHHH---HHHHHHhCCCCEEEecCCCcc-hhHHHHHHHHHHHcCCeEEEEe
Confidence 4667777765 45565543 24566554 5556667 8888888877643 3456677777778888877554
Q ss_pred ccCC------------CHH----------HHHHHh-hh-cCceeeCCCCCCcchhhccccccc-hHHHHHHHhhHHhhHH
Q 005248 167 DIHF------------APS----------VALRVA-EC-FDKIRVNPGNFADRRAQFEQLEYT-DDEYQKELQHIEEVFS 221 (706)
Q Consensus 167 DIHF------------~~~----------~Al~a~-~~-~~kiRINPGNig~~~k~F~~~~Yt-deeY~~El~~I~~~f~ 221 (706)
=-+| |+. .+++.+ +. +..|.+.||--|. .|. +..+.+.++++.+.+.
T Consensus 82 ~~~~~~~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~g~~g~--------~~~~~~~~~~~~~~~~~~l~ 153 (333)
T 3ktc_A 82 PEIYLQKWSRGAFTNPDPAARAAAFELMHESAGIVRELGANYVKVWPGQDGW--------DYPFQVSHKNLWKLAVDGMR 153 (333)
T ss_dssp ECTTSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEE--------SSTTSSCHHHHHHHHHHHHH
T ss_pred cCcCcccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCc--------CCCCcCCHHHHHHHHHHHHH
Confidence 3222 221 122222 33 8889999983221 111 2235677888999999
Q ss_pred HHHHHHHHcCCeEEEec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecC
Q 005248 222 PLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKAS 284 (706)
Q Consensus 222 ~vv~~ake~~~~IRIGv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaS 284 (706)
++.+.|++ +-|.|.. |++. +. ..++.+.-+.++++++.|-.++.+-+=..
T Consensus 154 ~l~~~a~~--~~i~lE~~p~~~--------~~---~~~~~~~~~~~~ll~~v~~~~vgl~lD~~ 204 (333)
T 3ktc_A 154 DLAGANPD--VKFAIEYKPREP--------RV---KMTWDSAARTLLGIEDIGLDNVGVLLDFG 204 (333)
T ss_dssp HHHHTCTT--SEEEEECCSCSS--------SS---EESSCSHHHHHHHHHHHTCTTEEEEEEHH
T ss_pred HHHHHhhc--CCEEEEEecCCC--------Cc---cccCCCHHHHHHHHHHcCCcceEEEEecC
Confidence 99999975 4444452 1110 00 01122333445666677766776665433
No 144
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=84.38 E-value=1.7 Score=45.27 Aligned_cols=112 Identities=19% Similarity=0.275 Sum_probs=80.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.+++|= .|. .-|.+.+++=+++|++.|.+.+==-++ ..+.+.+.+++++ +++|+++|=. +++.-+.
T Consensus 180 ~g~~~~l~vD--an~-~~~~~~a~~~~~~L~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 250 (354)
T 3jva_A 180 VGFDIKLRLD--ANQ-AWTPKDAVKAIQALADYQIELVEQPVK-RRDLEGLKYVTSQ-----VNTTIMADESCFDAQDAL 250 (354)
T ss_dssp HCTTSEEEEE--CTT-CSCHHHHHHHHHHTTTSCEEEEECCSC-TTCHHHHHHHHHH-----CSSEEEESTTCCSHHHHH
T ss_pred cCCCCeEEEE--CCC-CCCHHHHHHHHHHHHhcCCCEEECCCC-hhhHHHHHHHHHh-----CCCCEEEcCCcCCHHHHH
Confidence 6777788873 121 235677777778888877666642233 1245677788875 7899999955 4566666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
.+++ .++-|.|.|+..|.-. ...++++.|+++|+++=+|...
T Consensus 251 ~~l~~~~~d~v~~k~~~~GGit----------------------~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 251 ELVKKGTVDVINIKLMKCGGIH----------------------EALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHHTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHcCCCCEEEECchhcCCHH----------------------HHHHHHHHHHHcCCeEEecCCC
Confidence 6665 4999999999998743 5678999999999999887765
No 145
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=84.29 E-value=3.4 Score=43.56 Aligned_cols=112 Identities=17% Similarity=0.207 Sum_probs=74.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+++|=- |. .-|.+..++-+++|.+.|.+.+===++ .++-+.+.+++++ +++||.+|=.+ +..-+.
T Consensus 190 ~g~~~~l~vDa--N~-~~~~~~A~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 260 (381)
T 3fcp_A 190 LGDRASIRVDV--NQ-AWDAATGAKGCRELAAMGVDLIEQPVS-AHDNAALVRLSQQ-----IETAILADEAVATAYDGY 260 (381)
T ss_dssp TCTTCEEEEEC--TT-CBCHHHHHHHHHHHHHTTCSEEECCBC-TTCHHHHHHHHHH-----SSSEEEESTTCCSHHHHH
T ss_pred cCCCCeEEEEC--CC-CCCHHHHHHHHHHHhhcCccceeCCCC-cccHHHHHHHHHh-----CCCCEEECCCcCCHHHHH
Confidence 45555666531 11 123555566677777777766642222 1345667777775 78999999654 455555
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
.+++ +++-|.|.|...|.-. ...++.+.|+++|+++=+|.++
T Consensus 261 ~~~~~~a~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~~~~~ 304 (381)
T 3fcp_A 261 QLAQQGFTGAYALKIAKAGGPN----------------------SVLALARVAQAAGIGLYGGTML 304 (381)
T ss_dssp HHHHTTCCSEEEECHHHHTSTT----------------------HHHHHHHHHHHHTCEEEECCSC
T ss_pred HHHHcCCCCEEEecccccCCHH----------------------HHHHHHHHHHHcCCceecCCCC
Confidence 5654 5999999999998743 5678999999999999766544
No 146
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=84.25 E-value=1.6 Score=46.27 Aligned_cols=56 Identities=23% Similarity=0.366 Sum_probs=44.1
Q ss_pred eEeccCC---CCcccccHHHHHHHHHHHhC------CCC-CCeEEEEcccccCccccccCceeeecc
Q 005248 641 EYVSCPS---CGRTLFDLQEISAEIREKTS------HLP-GVSIAIMGCIVNGPGEMADADFGYVGG 697 (706)
Q Consensus 641 e~ISCPs---CGRTlfDLq~~~a~Ik~~t~------hLk-glkIAIMGCIVNGPGEmadAD~GyvG~ 697 (706)
..++||+ |.--.+|-+.++.+|.+.+. .|+ .+||++=||. |+=|...-+|+|++|.
T Consensus 130 ni~aC~g~~~C~~a~~Dt~~~a~~l~~~l~~~~~~~~LP~k~kI~vsgC~-~~C~~~~~~Dig~~g~ 195 (366)
T 3mm5_B 130 NIVHTQGWIHCHTPAIDASGIVKAVMDELYEYFTDHKLPAMCRISLACCA-NMCGAVHASDIAIVGI 195 (366)
T ss_dssp CCBCCCHHHHCSSCSSCSHHHHHHHHHHTHHHHHSCCBSSCCCEEEESST-TCSSSGGGSSEEEEEE
T ss_pred eeecCCCccccchHHHHHHHHHHHHHHHHHHhhccccccccceeccccCc-cccccccccccccccc
Confidence 4789975 88888998888887665553 366 7999999996 5666677799999987
No 147
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=84.19 E-value=3.8 Score=43.75 Aligned_cols=111 Identities=9% Similarity=0.024 Sum_probs=81.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe-cCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT-VQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvt-v~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (706)
+|.+.+++|= .| ..-+.+.+++-+++|++.|.+.+=-- ++ ..+.+.+.+|+++ +++|+.+|=. +++.-+
T Consensus 210 ~g~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 280 (410)
T 3dip_A 210 VGQRIEIMCE--LH-SLWGTHAAARICNALADYGVLWVEDPIAK-MDNIPAVADLRRQ-----TRAPICGGENLAGTRRF 280 (410)
T ss_dssp HTTSSEEEEE--CT-TCBCHHHHHHHHHHGGGGTCSEEECCBSC-TTCHHHHHHHHHH-----HCCCEEECTTCCSHHHH
T ss_pred cCCCceEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCCC-cccHHHHHHHHhh-----CCCCEEecCCcCCHHHH
Confidence 4667777773 22 23467777777888999998887643 33 2356677888885 7899999954 456677
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
..+++ ++|-|.|.|+..|.-. ....+...|+++|+++=++..
T Consensus 281 ~~~l~~~~~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 281 HEMLCADAIDFVMLDLTWCGGLS----------------------EGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp HHHHHTTCCSEEEECTTTSSCHH----------------------HHHHHHHHHHHTTCCEEECSS
T ss_pred HHHHHcCCCCeEeecccccCCHH----------------------HHHHHHHHHHHcCCEEeeeCc
Confidence 76665 4999999999998733 567799999999999866543
No 148
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=83.63 E-value=8.7 Score=40.71 Aligned_cols=78 Identities=18% Similarity=0.294 Sum_probs=55.8
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceee-ccCCCHHHHH
Q 005248 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVA-DIHFAPSVAL 176 (706)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVA-DIHF~~~~Al 176 (706)
.-|+-+.-.+++ .+++..+.++|+++|=|.+.. ..-.+.+++|++. +++|+++ .+ .++..|.
T Consensus 95 ~~pvga~ig~~~--------~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~-----~~~~Vivg~v-~t~e~A~ 160 (361)
T 3khj_A 95 GLRVGAAIGVNE--------IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-----MNIDVIVGNV-VTEEATK 160 (361)
T ss_dssp CCCCEEEECTTC--------HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH-----CCCEEEEEEE-CSHHHHH
T ss_pred CceEEEEeCCCH--------HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh-----cCCcEEEccC-CCHHHHH
Confidence 345555555443 788999999999999874332 2335677777775 5799986 66 4688888
Q ss_pred HHhhh-cCceee--CCCCC
Q 005248 177 RVAEC-FDKIRV--NPGNF 192 (706)
Q Consensus 177 ~a~~~-~~kiRI--NPGNi 192 (706)
.++++ +|-|-+ .||.+
T Consensus 161 ~l~~aGaD~I~VG~~~Gs~ 179 (361)
T 3khj_A 161 ELIENGADGIKVGIGPGSI 179 (361)
T ss_dssp HHHHTTCSEEEECSSCCTT
T ss_pred HHHHcCcCEEEEecCCCcC
Confidence 88887 998887 46654
No 149
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=83.55 E-value=1.1 Score=46.62 Aligned_cols=112 Identities=12% Similarity=0.142 Sum_probs=75.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.+++|= .|. .-|.+.+++=+++|++.|.+.+==-++ ..+.+.+.+++++ +++|+++|=. +++.-+.
T Consensus 181 ~g~~~~l~vD--an~-~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 251 (356)
T 3ro6_B 181 LAGRAVVRVD--PNQ-SYDRDGLLRLDRLVQELGIEFIEQPFP-AGRTDWLRALPKA-----IRRRIAADESLLGPADAF 251 (356)
T ss_dssp HTTSSEEEEE--CTT-CCCHHHHHHHHHHHHHTTCCCEECCSC-TTCHHHHHTSCHH-----HHHTEEESTTCCSHHHHH
T ss_pred hCCCCEEEEe--CCC-CCCHHHHHHHHHHHHhcCCCEEECCCC-CCcHHHHHHHHhc-----CCCCEEeCCcCCCHHHHH
Confidence 4666667663 111 124555566667777777766642232 1234555555553 6799999965 4466666
Q ss_pred HHhh---hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 177 RVAE---CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 177 ~a~~---~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
.+++ .++-|.|.|+..|.-. ...++++.|+++|+++=+|.+.
T Consensus 252 ~~~~~~~~~d~v~~k~~~~GGit----------------------~~~~i~~~a~~~gi~~~~~~~~ 296 (356)
T 3ro6_B 252 ALAAPPAACGIFNIKLMKCGGLA----------------------PARRIATIAETAGIDLMWGCMD 296 (356)
T ss_dssp HHHSSSCSCSEEEECHHHHCSHH----------------------HHHHHHHHHHHHTCEEEECCCS
T ss_pred HHHhcCCcCCEEEEcccccCCHH----------------------HHHHHHHHHHHcCCEEEecCCc
Confidence 6666 7999999999998733 5678999999999999887543
No 150
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=83.52 E-value=4.6 Score=39.29 Aligned_cols=88 Identities=16% Similarity=0.157 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCc
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig~ 194 (706)
|.+..++.++++.+.|+.+|=++..+....+.++.+++ -++.+-++.-++..-+..|++. ++-+ ..|+. +
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~------~~~~~gag~vl~~d~~~~A~~~GAd~v-~~~~~--d 93 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRK------SGLLLGAGTVRSPKEAEAALEAGAAFL-VSPGL--L 93 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTT------SSCEEEEESCCSHHHHHHHHHHTCSEE-EESSC--C
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhC------CCCEEEeCeEeeHHHHHHHHHcCCCEE-EcCCC--C
Confidence 33445777888999999999999888877777777665 3567788887788888888876 6666 55542 1
Q ss_pred chhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 195 ~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.++++.|+++|+++=+|+
T Consensus 94 --------------------------~~v~~~~~~~g~~~i~G~ 111 (207)
T 2yw3_A 94 --------------------------EEVAALAQARGVPYLPGV 111 (207)
T ss_dssp --------------------------HHHHHHHHHHTCCEEEEE
T ss_pred --------------------------HHHHHHHHHhCCCEEecC
Confidence 358899999999988886
No 151
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=83.43 E-value=2.5 Score=44.04 Aligned_cols=93 Identities=11% Similarity=0.102 Sum_probs=65.6
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCcchh
Q 005248 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRA 197 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNig~~~k 197 (706)
++-+++|.+.|.+.+===++ ..+.+.+.+++++ +++|+++|=.+ ++.-+..+++ +++-|.|.|..+|.-.
T Consensus 205 ~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit- 277 (375)
T 1r0m_A 205 AGRLRQLDEYDLTYIEQPLA-WDDLVDHAELARR-----IRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHA- 277 (375)
T ss_dssp HHHHHTTGGGCCSCEECCSC-TTCSHHHHHHHHH-----CSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHH-
T ss_pred HHHHHHHHhCCCcEEECCCC-cccHHHHHHHHHh-----CCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHH-
Confidence 55555666667666543232 2345667777775 78999999664 5666666665 4999999999998833
Q ss_pred hccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC
Q 005248 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 198 ~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
...++++.|+++|+++=+|-+++
T Consensus 278 ---------------------~~~~i~~~A~~~g~~~~~~~~~e 300 (375)
T 1r0m_A 278 ---------------------ESRRVHDVAQSFGAPVWCGGMLE 300 (375)
T ss_dssp ---------------------HHHHHHHHHHHTTCCEEECCCCC
T ss_pred ---------------------HHHHHHHHHHHcCCcEEecCccc
Confidence 45779999999999975555443
No 152
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=83.41 E-value=34 Score=36.28 Aligned_cols=154 Identities=10% Similarity=0.097 Sum_probs=91.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceee-CC
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRV-NP 189 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRI-NP 189 (706)
...++.-++=+..|.++|.+.+=+..| +..+++++..|++. +.+.++.+=.=-+.+-...|+++ ++-||| .+
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~----~~~~~v~~~~r~~~~di~~a~~~g~~~v~i~~~ 96 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASL----GLKAKVVTHIQCRLDAAKVAVETGVQGIDLLFG 96 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTS----CCSSEEEEEEESCHHHHHHHHHTTCSEEEEEEC
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhc----CCCcEEEEEcccChhhHHHHHHcCCCEEEEEec
Confidence 455677788888999999999999877 56778888888764 55566665321123334556665 888885 23
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcC--CeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHH
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG--RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFAR 267 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~--~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~ 267 (706)
-|--..+ .|. ...+.+-+++.+.|+.||++| ..+++..--++ -.++ +-+++.++
T Consensus 97 ~s~~~~~-~~~----------~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~---------~~~~----~~~~~~~~ 152 (382)
T 2ztj_A 97 TSKYLRA-PHG----------RDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTF---------RSEE----QDLLAVYE 152 (382)
T ss_dssp C---------C----------CCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTT---------TSCH----HHHHHHHH
T ss_pred cCHHHHH-HhC----------CCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCC---------CCCH----HHHHHHHH
Confidence 3211111 111 112334456788999999999 88888764332 1233 34555666
Q ss_pred HHHHCCCCcEEEEEecC----ChhHHHHHHHHHHH
Q 005248 268 ICRKLDFHNFLFSMKAS----NPVVMVQAYRLLVA 298 (706)
Q Consensus 268 i~e~~~f~~iviS~KaS----nv~~~i~ayrlla~ 298 (706)
.+.+. -+ .|+++-+ .|..+-+-.+.|.+
T Consensus 153 ~~~~~-a~--~i~l~DT~G~~~P~~~~~lv~~l~~ 184 (382)
T 2ztj_A 153 AVAPY-VD--RVGLADTVGVATPRQVYALVREVRR 184 (382)
T ss_dssp HHGGG-CS--EEEEEETTSCCCHHHHHHHHHHHHH
T ss_pred HHHHh-cC--EEEecCCCCCCCHHHHHHHHHHHHH
Confidence 66666 44 5666654 44444444444443
No 153
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=83.36 E-value=2.1 Score=41.31 Aligned_cols=103 Identities=13% Similarity=0.058 Sum_probs=66.4
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCC----CHHHH
Q 005248 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHF----APSVA 175 (706)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF----~~~~A 175 (706)
++.+|+.+-.+ .|.+. .+..++++|.+-|=+.... .-..+.+.++++.|++.|+.+..+.-.-+ ..+.+
T Consensus 19 klg~~~~~~~~-~~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~ 94 (257)
T 3lmz_A 19 HLGMAGYTFVN-FDLDT---TLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRA 94 (257)
T ss_dssp EEEECGGGGTT-SCHHH---HHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHH
T ss_pred EEEEEEEeecC-CCHHH---HHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHH
Confidence 45577776654 36654 4556677899999888642 22355677888888888887665532111 12233
Q ss_pred HHHh-hh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 176 LRVA-EC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 176 l~a~-~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
++.+ +. +..|++.|| . +.+.++.+.|+++|+.+=
T Consensus 95 i~~A~~lGa~~v~~~p~-----~---------------------~~l~~l~~~a~~~gv~l~ 130 (257)
T 3lmz_A 95 FDYAKRVGVKLIVGVPN-----Y---------------------ELLPYVDKKVKEYDFHYA 130 (257)
T ss_dssp HHHHHHHTCSEEEEEEC-----G---------------------GGHHHHHHHHHHHTCEEE
T ss_pred HHHHHHhCCCEEEecCC-----H---------------------HHHHHHHHHHHHcCCEEE
Confidence 3333 33 888999886 1 256779999999998553
No 154
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=82.96 E-value=1.3 Score=46.54 Aligned_cols=109 Identities=16% Similarity=0.164 Sum_probs=73.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (706)
+|.+-+|.|=- | ..-+.+.+++-+++|++.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+. +.-+.
T Consensus 206 vG~d~~l~vDa--n-~~~~~~~ai~~~~~l~~~~i~~iE~P~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 276 (403)
T 2ox4_A 206 VGPDVDIIVEN--H-GHTDLVSAIQFAKAIEEFNIFFYEEINT-PLNPRLLKEAKKK-----IDIPLASGERIYSRWGFL 276 (403)
T ss_dssp HCTTSEEEEEC--T-TCSCHHHHHHHHHHHGGGCEEEEECCSC-TTSTHHHHHHHHT-----CCSCEEECTTCCHHHHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhhCCCEEeCCCC-hhhHHHHHHHHHh-----CCCCEEecCCcCCHHHHH
Confidence 45556666521 1 2235666666677777776555422122 2345667777774 689999997764 56666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ .++-|.|.|..+|.-. ...++++.|+++|+++=+|
T Consensus 277 ~~i~~~~~d~v~ik~~~~GGit----------------------e~~~i~~~A~~~g~~~~~h 317 (403)
T 2ox4_A 277 PFLEDRSIDVIQPDLGTCGGFT----------------------EFKKIADMAHIFEVTVQAH 317 (403)
T ss_dssp HHHHTTCCSEECCCHHHHTHHH----------------------HHHHHHHHHHHTTCEECCC
T ss_pred HHHHcCCCCEEecCccccCCHH----------------------HHHHHHHHHHHcCCEEeec
Confidence 6665 4999999999998733 5678999999999998554
No 155
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=82.81 E-value=6.1 Score=40.53 Aligned_cols=120 Identities=12% Similarity=0.143 Sum_probs=79.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCceee-----
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIRV----- 187 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiRI----- 187 (706)
.|.+..++++.++.+.|..-+.+-+-..++.+.+..|++.+ -++.|..|.| |++.-|+..++.+++++|
T Consensus 131 ~~~e~~~~~a~~~~~~G~~~~KiKvg~~~d~~~v~avr~~~----~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEq 206 (324)
T 1jpd_X 131 GTPDQMANSASTLWQAGAKLLKVKLDNHLISERMVAIRTAV----PDATLIVDANESWRAEGLAARCQLLADLGVAMLEQ 206 (324)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHC----TTSEEEEECTTCCCSTTHHHHHHHHHHTTCCEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCchHHHHHHHHHHhC----CCCEEEEECcCCCCHHHHHHHHHHHHhCCCCEEEC
Confidence 36788999999999999999999887767788888898864 2688999988 555556555555666555
Q ss_pred --CCCCCCcchhhcc--------ccccchHHHHHHHhhHH------------hhHHHHHHHHHHcCCeEEEecC
Q 005248 188 --NPGNFADRRAQFE--------QLEYTDDEYQKELQHIE------------EVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 188 --NPGNig~~~k~F~--------~~~YtdeeY~~El~~I~------------~~f~~vv~~ake~~~~IRIGvN 239 (706)
.|.|+..-. .+. +..+|-+++.+-++..+ ....++++.|+++|+++=+|..
T Consensus 207 P~~~~d~~~~~-~l~~~ipIa~dE~~~~~~~~~~~~~~~~~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~ 279 (324)
T 1jpd_X 207 PLPAQDDAALE-NFIHPLPICADESCHTRSNLKALKGRYEMVNIKLDKTGGLTEALALATEARAQGFSLMLGCM 279 (324)
T ss_dssp CSCTTSCGGGG-SSCCSSCEEESTTCSSGGGHHHHBTTBSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCCCHHHHH-hccCCCCEEEcCCCCCHHHHHHHHhhCCEEEEcchhhCcHHHHHHHHHHHHHcCCcEEEeCc
Confidence 566653211 111 12233344444333211 1235778889999999877653
No 156
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=82.74 E-value=1.8 Score=45.84 Aligned_cols=109 Identities=10% Similarity=0.059 Sum_probs=78.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+-+|+|=- | ..-|.+.+++-+++|++.|.+.+==-++ .++.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 207 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 277 (410)
T 2qq6_A 207 VGPEVEVAIDM--H-GRFDIPSSIRFARAMEPFGLLWLEEPTP-PENLDALAEVRRS-----TSTPICAGENVYTRFDFR 277 (410)
T ss_dssp HCSSSEEEEEC--T-TCCCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHTT-----CSSCEEECTTCCSHHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHhhcCCCeEECCCC-hhhHHHHHHHHhh-----CCCCEEeCCCcCCHHHHH
Confidence 46667776621 2 2336777777788888888887643333 2456777888874 78999999654 667777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
.+++ .++-|.|.|..+|.-. ...++++.|+++|+++=++
T Consensus 278 ~~i~~~~~d~v~ik~~~~GGit----------------------e~~~ia~~A~~~g~~~~~h 318 (410)
T 2qq6_A 278 ELFAKRAVDYVMPDVAKCGGLA----------------------EAKRIANLAELDYIPFAPH 318 (410)
T ss_dssp HHHHTTCCSEECCBHHHHTHHH----------------------HHHHHHHHHHTTTCCBCCB
T ss_pred HHHHcCCCCEEecCccccCCHH----------------------HHHHHHHHHHHcCCeEeec
Confidence 7775 4999999999998733 5677999999999987554
No 157
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=82.68 E-value=17 Score=37.69 Aligned_cols=147 Identities=14% Similarity=0.164 Sum_probs=94.5
Q ss_pred HHHcCCCEEEEecCCH----------------HHHHHHHHHHHhhccCCcC-cceeeccCC-CH---HHHHHHh----h-
Q 005248 127 IADQGADLVRITVQGK----------------READACFEIKNSLVQKNYN-IPLVADIHF-AP---SVALRVA----E- 180 (706)
Q Consensus 127 L~~aGceiVRvtv~~~----------------~~A~al~~I~~~L~~~g~~-iPLVADIHF-~~---~~Al~a~----~- 180 (706)
+.++|+|++ ++-.+. +-....+.|++ +.+ .|+|+|+-| .| .-|+..+ +
T Consensus 45 ~e~aG~d~i-lvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r-----~~~~~~vvaD~pfgsY~s~~~a~~~a~rl~ka 118 (275)
T 3vav_A 45 LDRANVDVQ-LIGDSLGNVLQGQTTTLPVTLDDIAYHTACVAR-----AQPRALIVADLPFGTYGTPADAFASAVKLMRA 118 (275)
T ss_dssp HHHTTCSEE-EECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHH-----TCCSSEEEEECCTTSCSSHHHHHHHHHHHHHT
T ss_pred HHHcCCCEE-EECcHHHHHHcCCCCCCccCHHHHHHHHHHHHh-----cCCCCCEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 678999999 553232 22344566665 674 999999999 34 3333222 1
Q ss_pred hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE--EecCCCCCchhHHHhh------C
Q 005248 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR--IGTNHGSLSDRIMSYY------G 252 (706)
Q Consensus 181 ~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR--IGvN~GSL~~~il~ry------g 252 (706)
.++.|-|-=| . ...+.|+...+.|+|+= ||.+ ++.. ... |
T Consensus 119 Ga~aVklEdg-----~----------------------~~~~~i~~l~~~GIpv~gHlglt----Pq~~-~~~gg~~vqg 166 (275)
T 3vav_A 119 GAQMVKFEGG-----E----------------------WLAETVRFLVERAVPVCAHVGLT----PQSV-HAFGGFKVQG 166 (275)
T ss_dssp TCSEEEEECC-----G----------------------GGHHHHHHHHHTTCCEEEEEESC----GGGH-HHHC---CCC
T ss_pred CCCEEEECCc-----h----------------------hHHHHHHHHHHCCCCEEEecCCC----ceEE-eccCCeEEEc
Confidence 1444444332 1 23567777788999973 4543 3332 223 3
Q ss_pred CChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCcccccccccCCCCCCchh
Q 005248 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325 (706)
Q Consensus 253 dt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~g~~G~IK 325 (706)
.| ++-.+.+++-++.+++-|-+-|++-+=.+. ..+.++++ .+-|+ +|+ =||.+-||-|-
T Consensus 167 rt-~~~a~~~i~rA~a~~eAGA~~ivlE~vp~~------~a~~It~~-----l~iP~-igI-GaG~~cdgQvL 225 (275)
T 3vav_A 167 KT-EAGAAQLLRDARAVEEAGAQLIVLEAVPTL------VAAEVTRE-----LSIPT-IGI-GAGAECSGQVL 225 (275)
T ss_dssp CS-HHHHHHHHHHHHHHHHHTCSEEEEESCCHH------HHHHHHHH-----CSSCE-EEE-SSCSCSSEEEE
T ss_pred CC-HHHHHHHHHHHHHHHHcCCCEEEecCCCHH------HHHHHHHh-----CCCCE-EEE-ccCCCCCceee
Confidence 33 345699999999999999999999874331 35566777 68887 787 68888888763
No 158
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=82.64 E-value=1.5 Score=46.89 Aligned_cols=58 Identities=24% Similarity=0.374 Sum_probs=43.4
Q ss_pred ceEeccCC---CCcccccHHHHHHHHHH----HhC--CCC-CCeEEEEcccccCccccccCceeeeccC
Q 005248 640 TEYVSCPS---CGRTLFDLQEISAEIRE----KTS--HLP-GVSIAIMGCIVNGPGEMADADFGYVGGA 698 (706)
Q Consensus 640 te~ISCPs---CGRTlfDLq~~~a~Ik~----~t~--hLk-glkIAIMGCIVNGPGEmadAD~GyvG~~ 698 (706)
...++||+ |..-.+|-+.++.+|.+ .+. .|+ .+||+|=||. |+=|...-+|+|++|.-
T Consensus 140 Rni~aC~G~~~C~~a~~Dt~~~a~~l~~~l~~~~~~~~LP~K~kI~vsGCp-n~C~~~~~~Dig~vg~~ 207 (386)
T 3or1_B 140 SNIVHTQGWVYCHTPATDASGPVKAVMDELFEEFTSMRLPAIVRVSLACCI-NMCGAVHCSDIGLVGIH 207 (386)
T ss_dssp CCCBCCCGGGTCSSCSSCSHHHHHHHHHHTHHHHSCCCSSSCCCEEEESST-TCCSSGGGSSEEEEEEC
T ss_pred cceEecCCccccchhHHHHHHHHHHHHHHHHHhhhccccceeeEEeeccCc-ccccccccccccccccc
Confidence 35789986 66677888777776644 333 456 7899999995 55667788999999973
No 159
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=82.59 E-value=1.7 Score=45.52 Aligned_cols=68 Identities=13% Similarity=0.192 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhH
Q 005248 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVF 220 (706)
Q Consensus 144 ~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f 220 (706)
+.+.++++++ .+++|+++|=.+ ++.-+..+++ .+|-|.|.|+.+|.-. .+
T Consensus 225 d~~~~~~l~~-----~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~----------------------~~ 277 (378)
T 2qdd_A 225 TLDQCAHVAR-----RVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLT----------------------RA 277 (378)
T ss_dssp SHHHHHHHHT-----TCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHH----------------------HH
T ss_pred CHHHHHHHHH-----hCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHH----------------------HH
Confidence 3455556665 378999999655 5677777765 4999999999998844 56
Q ss_pred HHHHHHHHHcCCeEEEec
Q 005248 221 SPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 221 ~~vv~~ake~~~~IRIGv 238 (706)
.++++.|+++|+++=+|-
T Consensus 278 ~~i~~~A~~~g~~~~~~~ 295 (378)
T 2qdd_A 278 RQIRDFGVSVGWQMHIED 295 (378)
T ss_dssp HHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHcCCeEEecC
Confidence 789999999999998873
No 160
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=82.42 E-value=4.8 Score=39.94 Aligned_cols=68 Identities=13% Similarity=0.184 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCEEEEecC---CH-HHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCc
Q 005248 120 TVEEVMRIADQGADLVRITVQ---GK-READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~---~~-~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig~ 194 (706)
+.+|+.++.++|+|+|=+-+. +. .-.+-++.+++ ..+++++|+| +...|..|.+. +|-|-+|.-++..
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~------~g~~v~~~v~-t~eea~~a~~~Gad~Ig~~~~g~t~ 162 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRL------HGLLAMADCS-TVNEGISCHQKGIEFIGTTLSGYTG 162 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH------TTCEEEEECS-SHHHHHHHHHTTCSEEECTTTTSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHH------CCCEEEEecC-CHHHHHHHHhCCCCEEEecCccCCC
Confidence 578999999999999855432 22 33445555554 3689999999 57778888776 9989887666643
No 161
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=82.35 E-value=5.7 Score=43.18 Aligned_cols=106 Identities=14% Similarity=0.127 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHH-HHHcCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhh--hcCceeeC
Q 005248 115 KDVAGTVEEVMR-IADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAE--CFDKIRVN 188 (706)
Q Consensus 115 ~Dv~atv~Qi~~-L~~aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~--~~~kiRIN 188 (706)
-+.+..++-+++ |.+.+ |+=|-=| ..++-+.+..+++++ +.++|+|+|=.| +++-+..+++ +++-|.|.
T Consensus 263 ~t~~eai~~~~~ll~~y~--i~~IEdPl~~dD~eg~~~L~~~~---~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iK 337 (428)
T 3tqp_A 263 LTSEEMIDRLTEWTKKYP--VISIEDGLSENDWAGWKLLTERL---ENKVQLVGDDIFVTNPDILEKGIKKNIANAILVK 337 (428)
T ss_dssp BCHHHHHHHHHHHHHHSC--EEEEECCSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred cCHHHHHHHHHHHHhhcc--cceEeCCCCcccHHHHHHHHHhc---CCCcceeccccccCCHHHHHHHHHhCCCCEEEec
Confidence 356667777777 66665 7767655 345678899998864 467899999655 8988887776 49999999
Q ss_pred CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhH
Q 005248 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247 (706)
Q Consensus 189 PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~i 247 (706)
+..+|.-. ...++++.|+++|+++=+|-.+|.-++..
T Consensus 338 v~~iGGiT----------------------ealkia~lA~~~G~~~~v~H~sGEted~~ 374 (428)
T 3tqp_A 338 LNQIGTLT----------------------ETLATVGLAKSNKYGVIISHRSGETEDTT 374 (428)
T ss_dssp HHHHCCHH----------------------HHHHHHHHHHHTTCEEEEECCSBCCSCCH
T ss_pred ccccCCHH----------------------HHHHHHHHHHHcCCeEEEeCCCCCchHHH
Confidence 99998733 45679999999999988888888765543
No 162
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=82.32 E-value=7.7 Score=38.37 Aligned_cols=106 Identities=18% Similarity=0.215 Sum_probs=65.0
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH--------------------HHHHHHHHHHhhccCCcCcceeeccCCC
Q 005248 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGKR--------------------EADACFEIKNSLVQKNYNIPLVADIHFA 171 (706)
Q Consensus 112 t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~--------------------~A~al~~I~~~L~~~g~~iPLVADIHF~ 171 (706)
+..-|.+.+++.+++|.++|+|++=+-+|-.+ ..+.+.++.+++++. +++|++.-..+|
T Consensus 26 ~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~ 104 (262)
T 1rd5_A 26 AGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYK 104 (262)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCc
Confidence 33345689999999999999999988754210 011122333334443 789988754555
Q ss_pred HHH---HHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCC
Q 005248 172 PSV---ALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (706)
Q Consensus 172 ~~~---Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL 243 (706)
+-. ...|+++ ++.|=+....+ +...++++.||++|+..=++++.-+.
T Consensus 105 ~~~~~~~~~a~~aGadgv~v~d~~~-------------------------~~~~~~~~~~~~~g~~~i~~~a~~t~ 155 (262)
T 1rd5_A 105 PIMFRSLAKMKEAGVHGLIVPDLPY-------------------------VAAHSLWSEAKNNNLELVLLTTPAIP 155 (262)
T ss_dssp HHHSCCTHHHHHTTCCEEECTTCBT-------------------------TTHHHHHHHHHHTTCEECEEECTTSC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCh-------------------------hhHHHHHHHHHHcCCceEEEECCCCC
Confidence 422 0124454 77666632111 13566888999999987777765444
No 163
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=82.19 E-value=3.3 Score=44.02 Aligned_cols=108 Identities=10% Similarity=0.131 Sum_probs=79.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHH-HHHHHHHHHhhccCCcCcceeeccC-CCHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE-ADACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~-A~al~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (706)
+|.+.+++|=- |. .-|.+.+++=+++|++.|.+.+==-++. ++ .+.+.+|+++ +++|+.+|=. +++.-+
T Consensus 196 ~g~~~~l~vDa--N~-~~~~~~A~~~~~~L~~~~i~~iEeP~~~-~d~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 266 (392)
T 3ddm_A 196 LGAATPLMADA--NQ-GWDLPRARQMAQRLGPAQLDWLEEPLRA-DRPAAEWAELAQA-----APMPLAGGENIAGVAAF 266 (392)
T ss_dssp HCSSSCEEEEC--TT-CCCHHHHHHHHHHHGGGCCSEEECCSCT-TSCHHHHHHHHHH-----CSSCEEECTTCCSHHHH
T ss_pred cCCCceEEEeC--CC-CCCHHHHHHHHHHHHHhCCCEEECCCCc-cchHHHHHHHHHh-----cCCCEEeCCCCCCHHHH
Confidence 57778888742 22 2356777777888999998887643442 23 6778888885 7899999955 456666
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
..+++ .+|-|.|.|+..|.-. ....+...|+++|+++=.
T Consensus 267 ~~~i~~~a~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~ 307 (392)
T 3ddm_A 267 ETALAARSLRVMQPDLAKWGGFS----------------------GCLPVARAVVAAGLRYCP 307 (392)
T ss_dssp HHHHHHTCEEEECCCTTTTTHHH----------------------HHHHHHHHHHHTTCEECC
T ss_pred HHHHHcCCCCEEEeCcchhCCHH----------------------HHHHHHHHHHHcCCEEEe
Confidence 66655 4999999999998733 567899999999999833
No 164
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=82.08 E-value=29 Score=36.43 Aligned_cols=214 Identities=15% Similarity=0.136 Sum_probs=133.7
Q ss_pred eEEEceeecCCCCceEEEeccCCCCCC---HHHHHHHHHHHHHcCCCEEEEe----------------cCCHHHHHHHHH
Q 005248 90 TVMVGNVAIGSEHPIRVQTMTTNDTKD---VAGTVEEVMRIADQGADLVRIT----------------VQGKREADACFE 150 (706)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~D---v~atv~Qi~~L~~aGceiVRvt----------------v~~~~~A~al~~ 150 (706)
.+++|++.+ -|-|+.-.||.....| .+..++--.+.++-|+-+|=.- .-+.+..+.+++
T Consensus 7 P~~ig~~~l--~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~ 84 (363)
T 3l5l_A 7 PYTLKDVTL--RNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVP 84 (363)
T ss_dssp CEEETTEEE--SSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHHHH
T ss_pred CeeECCEEe--eCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHHHH
Confidence 478888887 6899999998754434 4556666677788777766321 225678899999
Q ss_pred HHHhhccCCcCcceeeccCCCHHHHHHHhhh-----c-----Cc-eeeCCCCCCcchh-hccccccchHHHHHHHhhHHh
Q 005248 151 IKNSLVQKNYNIPLVADIHFAPSVALRVAEC-----F-----DK-IRVNPGNFADRRA-QFEQLEYTDDEYQKELQHIEE 218 (706)
Q Consensus 151 I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-----~-----~k-iRINPGNig~~~k-~F~~~~YtdeeY~~El~~I~~ 218 (706)
|.+...+.|..+ ++=++--.+.+.....+ + .. --+-|-.+..... .-...+.| .+|++.|-+
T Consensus 85 ~~~~vh~~G~~i--~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt----~~eI~~ii~ 158 (363)
T 3l5l_A 85 VVQAIKAAGSVP--GIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMT----LDDIARVKQ 158 (363)
T ss_dssp HHHHHHHTTCEE--EEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECC----HHHHHHHHH
T ss_pred HHHHHHhcCCEE--EEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCC----HHHHHHHHH
Confidence 999999988754 44444434433200000 0 00 0123333322111 01123444 357788889
Q ss_pred hHHHHHHHHHHcCC-eEEEecCCCCCchhHHH--------hhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCCh---
Q 005248 219 VFSPLVEKCKKYGR-AVRIGTNHGSLSDRIMS--------YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP--- 286 (706)
Q Consensus 219 ~f~~vv~~ake~~~-~IRIGvN~GSL~~~il~--------rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv--- 286 (706)
.|..-.+.|++.|- .|-|=.-||-|-..+++ +||.+.+.=..-++|-++-.++.==.++.|++|-|-.
T Consensus 159 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~ 238 (363)
T 3l5l_A 159 DFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYD 238 (363)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcC
Confidence 99999999999885 46666678888555554 5776666656666677766655411456777887721
Q ss_pred --h-HHHHHHHHHHHhhhcCCCCCccccc
Q 005248 287 --V-VMVQAYRLLVAEMYVHGWDYPLHLG 312 (706)
Q Consensus 287 --~-~~i~ayrlla~~~~~eg~~YPLHLG 312 (706)
- ...+-+..+++++++.|.|| ||+-
T Consensus 239 ~~G~~~~~~~~~la~~L~~~Gvd~-i~vs 266 (363)
T 3l5l_A 239 GRDEQTLEESIELARRFKAGGLDL-LSVS 266 (363)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCCE-EEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCE-EEEe
Confidence 1 45677778899999999997 6654
No 165
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=82.05 E-value=3.6 Score=42.19 Aligned_cols=53 Identities=19% Similarity=0.345 Sum_probs=40.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec--CCHHHHHHHHHHHHhhccCCcCcceee
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITV--QGKREADACFEIKNSLVQKNYNIPLVA 166 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv--~~~~~A~al~~I~~~L~~~g~~iPLVA 166 (706)
|-+.+..++...++.+.|||||+|++ .+.++.-.|-+...++++...+.|+||
T Consensus 172 tP~~~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa 226 (276)
T 3o1n_A 172 TPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIIT 226 (276)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEEecCCChHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 34568888889999999999999986 556677777777766655445688876
No 166
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=81.86 E-value=16 Score=37.72 Aligned_cols=141 Identities=8% Similarity=0.050 Sum_probs=87.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec----CCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCC
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITV----QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv----~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINP 189 (706)
..+.+.-++++.++.+.|+.-|-++. |.....+.+.++-+.+++.|. ++-+||
T Consensus 98 ~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~-----------------------~i~~t~ 154 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGL-----------------------EACMTL 154 (369)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTS-----------------------EEEEEC
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCC-----------------------eEEEec
Confidence 45678888888888899998888864 554455556666555554332 123688
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHH
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARIC 269 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~ 269 (706)
|-+ +. +.++..++.|+- ||.++-.| +++++.+.+.+ .-.+..++.++.+
T Consensus 155 G~l-~~--------------------------e~l~~L~~aGvd-~v~i~les-~~e~~~~i~~~--~~~~~~l~~i~~a 203 (369)
T 1r30_A 155 GTL-SE--------------------------SQAQRLANAGLD-YYNHNLDT-SPEFYGNIITT--RTYQERLDTLEKV 203 (369)
T ss_dssp SSC-CH--------------------------HHHHHHHHHCCC-EEECCCBS-CHHHHHHHCCS--SCHHHHHHHHHHH
T ss_pred CCC-CH--------------------------HHHHHHHHCCCC-EEeecCcC-CHHHHHHhCCC--CCHHHHHHHHHHH
Confidence 865 21 133444556642 67777788 89999988642 1235566677777
Q ss_pred HHCCC---CcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCccccccc
Q 005248 270 RKLDF---HNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314 (706)
Q Consensus 270 e~~~f---~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLHLGVT 314 (706)
.+.|| -++++.+ --+..++.+..+.+.+. + ++|-|+++.
T Consensus 204 ~~~Gi~v~~~~I~Gl-~et~ed~~~~l~~l~~l----~-~~~~~i~~~ 245 (369)
T 1r30_A 204 RDAGIKVCSGGIVGL-GETVKDRAGLLLQLANL----P-TPPESVPIN 245 (369)
T ss_dssp HHHHCEEECCEEECS-SCCHHHHHHHHHHHHSS----S-SCCSEEEEE
T ss_pred HHcCCeeeeeeEeeC-CCCHHHHHHHHHHHHhh----c-CCCCEEEee
Confidence 77788 2345555 44566666666666532 1 345555543
No 167
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=81.85 E-value=3.7 Score=43.32 Aligned_cols=112 Identities=16% Similarity=0.203 Sum_probs=75.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+++|= .|. .-|.+.+++-+++|.+.|.+.+===++ .++-+.+.+++++ +++|+.+|=.+ ++.-+.
T Consensus 191 ~g~~~~l~vD--aN~-~~~~~~A~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 261 (382)
T 3dgb_A 191 LGDSASVRVD--VNQ-AWDEAVALRACRILGGNGIDLIEQPIS-RNNRAGMVRLNAS-----SPAPIMADESIECVEDAF 261 (382)
T ss_dssp HGGGSEEEEE--CTT-CBCHHHHHHHHHHHHTTTCCCEECCBC-TTCHHHHHHHHHH-----CSSCEEESTTCSSHHHHH
T ss_pred cCCCCeEEEe--CCC-CCCHHHHHHHHHHHhhcCcCeeeCCCC-ccCHHHHHHHHHh-----CCCCEEeCCCcCCHHHHH
Confidence 4555666663 221 224555666677778877766642222 1346677777775 78999999654 455555
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
.+++ +++-|.|.|...|.-. ...++...|+++|+++=+|..+
T Consensus 262 ~~~~~~~~d~v~~k~~~~GGit----------------------~~~~i~~~A~~~gi~~~~~~~~ 305 (382)
T 3dgb_A 262 NLAREGAASVFALKIAKNGGPR----------------------ATLRTAAIAEAAGIGLYGGTML 305 (382)
T ss_dssp HHHHHTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHHTCEEEECCSC
T ss_pred HHHHcCCCCEEEecccccCCHH----------------------HHHHHHHHHHHcCCeEeecCCC
Confidence 5554 4999999999998733 5678999999999999666544
No 168
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=81.83 E-value=2.7 Score=44.35 Aligned_cols=96 Identities=16% Similarity=0.222 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHHHHhh--hcCceeeCCCCCC
Q 005248 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAE--CFDKIRVNPGNFA 193 (706)
Q Consensus 117 v~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al~a~~--~~~kiRINPGNig 193 (706)
.+.+++-+++|++.|.+.+===++. ++.+.+.++++ .+++|+.+|=. +++.-+..+++ +++-|.|.|+..|
T Consensus 205 ~~~A~~~~~~L~~~~i~~iEqP~~~-~d~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~G 278 (385)
T 3i6e_A 205 IDEAVPRVLDVAQFQPDFIEQPVRA-HHFELMARLRG-----LTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSG 278 (385)
T ss_dssp GGGHHHHHHHHHTTCCSCEECCSCT-TCHHHHHHHHT-----TCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHT
T ss_pred HHHHHHHHHHHHhcCCCEEECCCCc-ccHHHHHHHHH-----hCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccC
Confidence 4445556667777776665322221 23556666666 37899999955 44555656664 4999999999998
Q ss_pred cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 194 ~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
.-. ...++++.|+++|+++=+|-++
T Consensus 279 Git----------------------~~~~i~~~A~~~gi~~~~~~~~ 303 (385)
T 3i6e_A 279 GLT----------------------RAQTVARIAAAHGLMAYGGDMF 303 (385)
T ss_dssp SHH----------------------HHHHHHHHHHHTTCEEEECCCS
T ss_pred CHH----------------------HHHHHHHHHHHcCCEEEeCCCC
Confidence 733 5677999999999999665433
No 169
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=81.70 E-value=1.8 Score=45.57 Aligned_cols=110 Identities=17% Similarity=0.186 Sum_probs=76.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.+++|=- |. .-|.+.+++-+++|.+.|.+.+==-++. .+.+.+.+++++ +++|+.+|=. +++.-+.
T Consensus 188 ~g~~~~l~vDa--n~-~~~~~~A~~~~~~l~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 258 (377)
T 3my9_A 188 FGERIDLRLDF--NQ-ALTPFGAMKILRDVDAFRPTFIEQPVPR-RHLDAMAGFAAA-----LDTPILADESCFDAVDLM 258 (377)
T ss_dssp HGGGSEEEEEC--TT-CCCTTTHHHHHHHHHTTCCSCEECCSCT-TCHHHHHHHHHH-----CSSCEEESTTCSSHHHHH
T ss_pred hCCCCeEEEeC--CC-CcCHHHHHHHHHHHhhcCCCEEECCCCc-cCHHHHHHHHHh-----CCCCEEECCccCCHHHHH
Confidence 56677777742 21 1234455666778888888876533332 346777888875 7899999955 4565666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
.+++ .+|-|.|.|+..|.-. ...+++..|+++|+++=+|-
T Consensus 259 ~~i~~~~~d~v~~k~~~~GGit----------------------~~~~i~~~a~~~gi~~~~~~ 300 (377)
T 3my9_A 259 EVVRRQAADAISVKIMKCGGLM----------------------KAQSLMAIADTAGLPGYGGT 300 (377)
T ss_dssp HHHHHTCCSEEECCHHHHTSHH----------------------HHHHHHHHHHHHTCCEECCE
T ss_pred HHHHcCCCCEEEecccccCCHH----------------------HHHHHHHHHHHcCCeEecCC
Confidence 6664 4999999999998733 56779999999999985544
No 170
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=81.60 E-value=4.2 Score=43.35 Aligned_cols=93 Identities=12% Similarity=0.210 Sum_probs=69.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNF 192 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNi 192 (706)
|.+..++-+++|++.|.+.+===++ +-+.+.+++++ +++|+.+|=.+ ++.-+..+++ +++-|.|.|...
T Consensus 224 ~~~~A~~~~~~l~~~~i~~iEqP~~---d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~ 295 (398)
T 4dye_A 224 SVPDSVRAGIALEELDLEYLEDPCV---GIEGMAQVKAK-----VRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKW 295 (398)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSS---HHHHHHHHHHH-----CCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEcCCCC---CHHHHHHHHhh-----CCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCcccc
Confidence 4566666677788888777654444 67778888875 78999999654 4555555554 599999999999
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
|.-. ...++...|+++|+++=+|.
T Consensus 296 GGit----------------------~~~~ia~~A~~~gi~~~~h~ 319 (398)
T 4dye_A 296 GGIA----------------------ATKALAAHCETFGLGMNLHS 319 (398)
T ss_dssp TSHH----------------------HHHHHHHHHHHHTCEEEECC
T ss_pred CCHH----------------------HHHHHHHHHHHcCCeEEEcC
Confidence 8733 56779999999999998875
No 171
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=81.24 E-value=4.8 Score=42.01 Aligned_cols=113 Identities=13% Similarity=0.154 Sum_probs=72.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (706)
+|.+.+++|=- |. .-|.+..++-+++|++.|-+.+===++ .++-+.+.+++++ +++|+.+|=+.. ..-+.
T Consensus 185 ~g~~~~l~vDa--N~-~~~~~~A~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 255 (378)
T 4hpn_A 185 IGPDMRLMIDA--NH-GYTVTEAITLGDRAAGFGIDWFEEPVV-PEQLDAYARVRAG-----QPIPVAGGETWHGRYGMW 255 (378)
T ss_dssp HTTTSEEEEEC--TT-CCCHHHHHHHHHHHGGGCCSCEECCSC-TTCHHHHHHHHHH-----SSSCEEECTTCCHHHHHH
T ss_pred cCCcEEEEEec--Cc-ccCHHHHHHHHhhhhhcccchhhcCCC-ccchhhhHHHHhh-----CCceeeCCcCccchHhHH
Confidence 45565665532 11 124556666666677666555432222 1345667777775 889999997654 33444
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GS 242 (706)
.+++ ++|-+.+.|+..|.-. ....+...|+++|+++ ++-++||
T Consensus 256 ~~i~~~a~d~i~~d~~~~GGit----------------------~~~~ia~~A~~~gi~v-~~h~~~~ 300 (378)
T 4hpn_A 256 QALSAGAVDILQPDLCGCGGFS----------------------EIQKIATLATLHGVRI-VPHVWGT 300 (378)
T ss_dssp HHHHTTCCSEECCBTTTTTHHH----------------------HHHHHHHHHHHHTCEE-CCBCCSS
T ss_pred HHHHcCCCCEEeeCCeeCCChh----------------------HHHHHHHHHHHcCCeE-EeCCCCc
Confidence 5544 4999999999998733 5677999999999997 4444444
No 172
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=80.81 E-value=4.7 Score=42.14 Aligned_cols=68 Identities=19% Similarity=0.166 Sum_probs=52.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
.|.+..++++.++.++|.+.|.+-+-. ..+.+.++.||+. -|-++||..|.| |+..-|++.++.+++.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a---~g~d~~l~vDan~~~~~~~a~~~~~~l~~~ 215 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGADWQSDIDRIRACLPL---LEPGEKAMADANQGWRVDNAIRLARATRDL 215 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHGGG---SCTTCEEEEECTTCSCHHHHHHHHHHTTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHh---cCCCCEEEEECCCCCCHHHHHHHHHHHHhC
Confidence 577899999999999999999998752 3455667777664 356799999988 5666666666667765
No 173
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=80.68 E-value=3.7 Score=45.21 Aligned_cols=103 Identities=14% Similarity=0.178 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhh--hcCceeeCCC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAE--CFDKIRVNPG 190 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~--~~~kiRINPG 190 (706)
+.+..++-..+|.+. ..|+-|-=| +.++-+.+.++++++ + ++|||+|=.| |++.+..+++ +++.|.|-+.
T Consensus 280 t~~elid~y~~lle~-ypI~~IEDPl~~dD~eg~a~Lt~~l---g-~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvn 354 (441)
T 3qtp_A 280 DVDGLIAEYVDYGKH-YPIASIEDPFAEDDWAAWNKFTVEH---G-NFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVN 354 (441)
T ss_dssp CHHHHHHHHHHHHHH-SCEEEEESCSCTTCHHHHHHHHHHT---T-TSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGG
T ss_pred CHHHHHHHHHHHhhh-cceeeecCCCChHHHHHHHHHHHhc---C-CceEEeccccccCHHHHHHHHHcCCCCEEEeccc
Confidence 456677776775442 348888655 456788999999974 3 6999999654 8999888886 4999999999
Q ss_pred CCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCch
Q 005248 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245 (706)
Q Consensus 191 Nig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~ 245 (706)
++|.-. ...++++.|+.+|+.+=+|-.+|--++
T Consensus 355 qiGGIT----------------------Ealkaa~lA~~~G~~vmvsHrsgETeD 387 (441)
T 3qtp_A 355 QIGTLT----------------------ETFKTIKMAQEKGWGVMASHRSGETED 387 (441)
T ss_dssp GTCCHH----------------------HHHHHHHHHHHTTCEEEEECCSSCCSC
T ss_pred ccccHH----------------------HHHHHHHHHHHcCCeEEEeCCCCCccH
Confidence 999843 456789999999999878776665444
No 174
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=80.58 E-value=2.7 Score=41.76 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=48.5
Q ss_pred HHHHHHHHHHcCCCEEEEecC---CH-HHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCc
Q 005248 120 TVEEVMRIADQGADLVRITVQ---GK-READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~---~~-~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig~ 194 (706)
+.+|+.++.++|+|+|=+-+. +. .-.+.++.+++ ..+++++|+| +...|..|.+. +|-|-+|.-++..
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~------~g~~v~~~v~-t~eea~~a~~~Gad~Ig~~~~g~t~ 162 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHH------HHLLTMADCS-SVDDGLACQRLGADIIGTTMSGYTT 162 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH------TTCEEEEECC-SHHHHHHHHHTTCSEEECTTTTSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHH------CCCEEEEeCC-CHHHHHHHHhCCCCEEEEcCccCCC
Confidence 578999999999999855432 22 33444555554 3689999999 57777888776 9989887766643
No 175
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=80.50 E-value=14 Score=38.35 Aligned_cols=144 Identities=18% Similarity=0.245 Sum_probs=90.3
Q ss_pred eEEEc-eeecCCCCc-eEEEeccCCCCCCHHHHHHHHHHHHHc----CCCEEEEe------------cCCHHHHHHHHHH
Q 005248 90 TVMVG-NVAIGSEHP-IRVQTMTTNDTKDVAGTVEEVMRIADQ----GADLVRIT------------VQGKREADACFEI 151 (706)
Q Consensus 90 ~V~VG-~v~IGG~~P-I~VQSMt~t~T~Dv~atv~Qi~~L~~a----GceiVRvt------------v~~~~~A~al~~I 151 (706)
.|.|. ++.+|+++| ++|-=.+... |.+...+-.++|.++ |-.+|.-. .++..-.+.|+.+
T Consensus 6 ~~~~~~~~~~G~~~~~~viaGPCsie--~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L 83 (285)
T 3sz8_A 6 NVAISPGVTAGNSLPFVLFGGINVLE--SLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIF 83 (285)
T ss_dssp EEEEETTEEEETTSCCEEEEEEEECC--CHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHH
T ss_pred eeccCCCceECCCCceEEEEeCCcCC--CHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHH
Confidence 35665 899999865 5555455443 566666666666665 46766543 3333334555555
Q ss_pred HHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcC
Q 005248 152 KNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG 231 (706)
Q Consensus 152 ~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~ 231 (706)
++..+ ...+|++.++|-...+.. .++.++-+-|--+|+-+ .++++++...+
T Consensus 84 ~~~~~--e~Glp~~Tev~d~~~v~~-l~~~vd~lqIgA~~~~n--------------------------~~LLr~va~~g 134 (285)
T 3sz8_A 84 AEVKA--RFGVPVITDVHEAEQAAP-VAEIADVLQVPAFLARQ--------------------------TDLVVAIAKAG 134 (285)
T ss_dssp HHHHH--HHCCCEEEECCSGGGHHH-HHTTCSEEEECGGGTTC--------------------------HHHHHHHHHTS
T ss_pred HHHHH--hcCCeEEEEeCCHHHHHH-HHHhCCEEEECccccCC--------------------------HHHHHHHHccC
Confidence 54433 367999999987665554 45679999998888843 23777777899
Q ss_pred CeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEE
Q 005248 232 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF 279 (706)
Q Consensus 232 ~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~ivi 279 (706)
+|| ++-.|-- -|++.|. .-++.+.+.|-++|++
T Consensus 135 kPV--ilK~G~~---------~t~~ei~----~ave~i~~~Gn~~i~L 167 (285)
T 3sz8_A 135 KPV--NVKKPQF---------MSPTQLK----HVVSKCGEVGNDRVML 167 (285)
T ss_dssp SCE--EEECCTT---------SCGGGTH----HHHHHHHHTTCCCEEE
T ss_pred CcE--EEeCCCC---------CCHHHHH----HHHHHHHHcCCCcEEE
Confidence 998 4433310 2455552 3445566778778776
No 176
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=80.42 E-value=55 Score=33.53 Aligned_cols=161 Identities=15% Similarity=0.167 Sum_probs=95.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC-C-HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCceeeCCC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQ-G-KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIRVNPG 190 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~-~-~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiRINPG 190 (706)
.|.+..++++.++.++|.+.+.+-+- + .++.+.++.||+. |-++||..|.| |++.-|+..++.+++.+|-+|
T Consensus 138 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v~avr~~----g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~ 213 (345)
T 2zad_A 138 DTVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKV----TRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIA 213 (345)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHH----STTCEEEEECTTCSCHHHHHHHHHHHHHTTCCCS
T ss_pred CCHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHHHHHHhh----CCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCee
Confidence 36788899999999999999999874 2 3345666666663 77899999988 555666666666777655533
Q ss_pred CCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCch--hHHHhhC-C-----ChHHHHHHH
Q 005248 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD--RIMSYYG-D-----SPRGMVESA 262 (706)
Q Consensus 191 Nig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~--~il~ryg-d-----t~eamVeSA 262 (706)
-| |+-.- .+.+..+-+..++.++||=.|=+.-+..+ ++++.-. | -..|=+..+
T Consensus 214 ~i-------E~P~~------------~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~GGit~~ 274 (345)
T 2zad_A 214 VY-------EQPVR------------REDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMKSGISDA 274 (345)
T ss_dssp EE-------ECCSC------------TTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHHHHHH
T ss_pred ee-------eCCCC------------cccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEecccccHHHH
Confidence 32 11110 01222333344455777744433222221 2232211 2 123678888
Q ss_pred HHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhh
Q 005248 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300 (706)
Q Consensus 263 le~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~ 300 (706)
++-+++|+++|.. +.++.= .....-..+.-.|+..+
T Consensus 275 ~~i~~~A~~~g~~-~~~~~~-~es~i~~aa~~hlaa~~ 310 (345)
T 2zad_A 275 LAIVEIAESSGLK-LMIGCM-GESSLGINQSVHFALGT 310 (345)
T ss_dssp HHHHHHHHTTTCE-EEECCS-SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCe-EEEecC-cccHHHHHHHHHHHHcC
Confidence 9999999999984 555532 23345556665665543
No 177
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=79.93 E-value=3.4 Score=43.35 Aligned_cols=108 Identities=6% Similarity=0.035 Sum_probs=76.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.+++|=- |. .-|.+.+++-+++|++.|.+.+==-++ .++-+.+..++++ +++|+.+|=. +++.-+.
T Consensus 194 ~g~~~~l~vDa--n~-~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 264 (372)
T 3tj4_A 194 VDSAVRIAIDG--NG-KWDLPTCQRFCAAAKDLDIYWFEEPLW-YDDVTSHARLARN-----TSIPIALGEQLYTVDAFR 264 (372)
T ss_dssp SCTTCEEEEEC--TT-CCCHHHHHHHHHHTTTSCEEEEESCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCSHHHHH
T ss_pred cCCCCcEEeeC--CC-CCCHHHHHHHHHHHhhcCCCEEECCCC-chhHHHHHHHHhh-----cCCCEEeCCCccCHHHHH
Confidence 67777887742 22 234666777777888877666543233 2346777788875 7899999954 4566666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
.+++ .++-|.|.|+..|.-. ...++...|+++|+++=+
T Consensus 265 ~~i~~~~~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~ 304 (372)
T 3tj4_A 265 SFIDAGAVAYVQPDVTRLGGIT----------------------EYIQVADLALAHRLPVVP 304 (372)
T ss_dssp HHHHTTCCSEECCCTTTTTHHH----------------------HHHHHHHHHHHTTCCBCC
T ss_pred HHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCEEEe
Confidence 6665 4999999999998733 567899999999998733
No 178
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=79.89 E-value=4.2 Score=43.04 Aligned_cols=112 Identities=10% Similarity=0.198 Sum_probs=81.0
Q ss_pred cCCCCceE-EEeccCCCCCCHHHHHHHHHHHHHcCC--CEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHH
Q 005248 98 IGSEHPIR-VQTMTTNDTKDVAGTVEEVMRIADQGA--DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSV 174 (706)
Q Consensus 98 IGG~~PI~-VQSMt~t~T~Dv~atv~Qi~~L~~aGc--eiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~ 174 (706)
+|.+.+|+ |=- | ..-|.+.+++-+++|++.|. +.+==-++ ..+.+.+.+|+++ +++|+ .---+++.-
T Consensus 183 ~g~~~~l~~vDa--n-~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~-~~d~~~~~~l~~~-----~~iPI-dE~~~~~~~ 252 (391)
T 3gd6_A 183 FGSRVRIKSYDF--S-HLLNWKDAHRAIKRLTKYDLGLEMIESPAP-RNDFDGLYQLRLK-----TDYPI-SEHVWSFKQ 252 (391)
T ss_dssp HGGGCEEEEEEC--T-TCSCHHHHHHHHHHHTTCCSSCCEEECCSC-TTCHHHHHHHHHH-----CSSCE-EEECCCHHH
T ss_pred cCCCCcEEEecC--C-CCcCHHHHHHHHHHHHhcCCCcceecCCCC-hhhHHHHHHHHHH-----cCCCc-CCCCCCHHH
Confidence 46677777 632 2 22367777777888999998 66643232 2346777888885 78998 445577777
Q ss_pred HHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC
Q 005248 175 ALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 175 Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
+..+++ +++-|.|.|+..|.-. ...++...|+++|+++=+|.+++
T Consensus 253 ~~~~~~~~~~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~~~~~~~e 299 (391)
T 3gd6_A 253 QQEMIKKDAIDIFNISPVFIGGLT----------------------SAKKAAYAAEVASKDVVLGTTQE 299 (391)
T ss_dssp HHHHHHHTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHTTCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECchhcCCHH----------------------HHHHHHHHHHHcCCEEEecCCCc
Confidence 777775 4999999999998743 56789999999999998876543
No 179
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=79.81 E-value=3.9 Score=40.79 Aligned_cols=53 Identities=9% Similarity=0.171 Sum_probs=38.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceee
Q 005248 113 DTKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVA 166 (706)
Q Consensus 113 ~T~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVA 166 (706)
.|-+.+.-.+.+.++.+.|||||+|++. +.++.-.|-+...+. +.+.+.|+||
T Consensus 137 ~tp~~~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~~-~~~~~~P~I~ 191 (238)
T 1sfl_A 137 STPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTF-SDTMDCKVVG 191 (238)
T ss_dssp CCCCHHHHHHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHHHHH-HHHCSSEEEE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHH-hhcCCCCEEE
Confidence 3445777888889999999999999975 566666666665554 2345788876
No 180
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=79.75 E-value=7.3 Score=41.24 Aligned_cols=113 Identities=19% Similarity=0.179 Sum_probs=77.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH-HHHHHHHHHHHhhccCCcCcceeeccC-CCHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK-READACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~-~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (706)
+|.+.+++|= .|. .-|.+.+++=+++|++.|..+.=|-=|-. ++-+.+.+++++ +++|+.+|=+ +++.-+
T Consensus 183 ~g~~~~L~vD--aN~-~w~~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 254 (379)
T 3r0u_A 183 FSKNIKFRFD--ANQ-GWNLAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEITKF-----SNIPVVADESVFDAKDA 254 (379)
T ss_dssp CCTTSEEEEE--CTT-CCCHHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHHHH-----CSSCEEESTTCSSHHHH
T ss_pred cCCCCeEEEe--CCC-CcCHHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHHhc-----CCCCEEeCCccCCHHHH
Confidence 5666777774 222 23466666667788884444444443322 346777788875 7899999955 455556
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
..+++ +++-|.|.|...|.-. ....+...|+++|+++=+|.+.
T Consensus 255 ~~~i~~~a~d~v~~k~~~~GGi~----------------------~~~~ia~~A~~~gi~~~~~~~~ 299 (379)
T 3r0u_A 255 ERVIDEQACNMINIKLAKTGGIL----------------------EAQKIKKLADSAGISCMVGCMM 299 (379)
T ss_dssp HHHHHTTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHTTCEEEECCCS
T ss_pred HHHHHcCCCCEEEECccccCCHH----------------------HHHHHHHHHHHcCCEEEEeCCC
Confidence 66665 4899999999998733 4677999999999999887653
No 181
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=79.74 E-value=11 Score=38.57 Aligned_cols=115 Identities=18% Similarity=0.281 Sum_probs=76.7
Q ss_pred cccCCCCceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC---------HHHHH-----
Q 005248 81 HKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG---------KREAD----- 146 (706)
Q Consensus 81 ~~~~Rr~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~---------~~~A~----- 146 (706)
|..-|.+.|..-|+=+..|- -|.+.|++-++.|.++|+|+|=+-+|= .+.|.
T Consensus 11 f~~~~~~~~~ali~yi~aGd--------------P~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~ 76 (271)
T 3nav_A 11 FQRLSAAQQGAFVPFVTIGD--------------PNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALA 76 (271)
T ss_dssp HHHHHHTTBCEEEEEEETTS--------------SCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHH
T ss_pred HHHHHhcCCCeEEEEEeCCC--------------CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
Confidence 33333444556666654443 277999999999999999999999887 44322
Q ss_pred ------HHHHHHHhhccCCcCcceeeccCCCH-------HHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHH
Q 005248 147 ------ACFEIKNSLVQKNYNIPLVADIHFAP-------SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKE 212 (706)
Q Consensus 147 ------al~~I~~~L~~~g~~iPLVADIHF~~-------~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~E 212 (706)
.+-++.+++|+.+.++|+|.=..+|| +.+..|+++ ++.+=|. |- .++
T Consensus 77 ~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip-----Dl--p~e------------ 137 (271)
T 3nav_A 77 AKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIA-----DV--PTN------------ 137 (271)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEET-----TS--CGG------------
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC-----CC--CHH------------
Confidence 12234444665568899998767774 345577776 8887663 21 111
Q ss_pred HhhHHhhHHHHHHHHHHcCCeE
Q 005248 213 LQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 213 l~~I~~~f~~vv~~ake~~~~I 234 (706)
...++++.|+++|+..
T Consensus 138 ------e~~~~~~~~~~~gl~~ 153 (271)
T 3nav_A 138 ------ESQPFVAAAEKFGIQP 153 (271)
T ss_dssp ------GCHHHHHHHHHTTCEE
T ss_pred ------HHHHHHHHHHHcCCeE
Confidence 2467899999999873
No 182
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=79.70 E-value=12 Score=39.27 Aligned_cols=106 Identities=10% Similarity=0.136 Sum_probs=73.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC-HHHHHHHHHHHHhhccCCc-CcceeeccCCCHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG-KREADACFEIKNSLVQKNY-NIPLVADIHFAPSVA 175 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~-~~~A~al~~I~~~L~~~g~-~iPLVADIHF~~~~A 175 (706)
+|.+-+|+|=- | ..-|.+.+++-+++|.++|.++.=+--|- ..+.+.+.+|+++ + ++|+++|=.+++.-+
T Consensus 187 ~G~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~g~~i~~iEqP~~~~~~~~~~~l~~~-----~~~iPIa~dE~~~~~~~ 258 (389)
T 2oz8_A 187 VPAGSKVMIDP--N-EAWTSKEALTKLVAIREAGHDLLWVEDPILRHDHDGLRTLRHA-----VTWTQINSGEYLDLQGK 258 (389)
T ss_dssp SCTTCEEEEEC--T-TCBCHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHHHHHHHHH-----CCSSEEEECTTCCHHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhcCCCceEEeCCCCCcCHHHHHHHHhh-----CCCCCEEeCCCCCHHHH
Confidence 57778888721 2 23467888888889999444333333331 2356778888885 6 799999977777777
Q ss_pred HHHhhh--cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEe
Q 005248 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (706)
Q Consensus 176 l~a~~~--~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIG 237 (706)
..+++. +|-|.|. |.-. ....+++.|+++|+++=+|
T Consensus 259 ~~~i~~~~~d~v~ik----GGit----------------------~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 259 RLLLEAHAADILNVH----GQVT----------------------DVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHTTCCSEEEEC----SCHH----------------------HHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHcCCCCEEEEC----cCHH----------------------HHHHHHHHHHHcCCeEeec
Confidence 777653 7777666 4322 4567999999999998777
No 183
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=79.57 E-value=4 Score=43.73 Aligned_cols=106 Identities=14% Similarity=0.220 Sum_probs=77.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCc-CcceeeccCC-CHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNY-NIPLVADIHF-APSVA 175 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~-~iPLVADIHF-~~~~A 175 (706)
+|.+-||+|=- | ..-+.+.+++-+++|++.|.+.+==-++ ..+.+.+..|+++ + ++|+++|=.. ++.-+
T Consensus 239 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~~iPIa~dE~~~~~~~~ 309 (441)
T 2hxt_A 239 IGPDIAMAVDA--N-QRWDVGPAIDWMRQLAEFDIAWIEEPTS-PDDVLGHAAIRQG-----ITPVPVSTGEHTQNRVVF 309 (441)
T ss_dssp HCSSSEEEEEC--T-TCCCHHHHHHHHHTTGGGCCSCEECCSC-TTCHHHHHHHHHH-----HTTSCEEECTTCCSHHHH
T ss_pred cCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhcCCCeeeCCCC-HHHHHHHHHHHhh-----CCCCCEEEeCCcCCHHHH
Confidence 67777777632 2 2346677777788888888887643333 2456777788875 4 6999999664 56777
Q ss_pred HHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 176 l~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
...++ .+|-|.|.|...|.-. ....+...|+++|+++
T Consensus 310 ~~~i~~~~~d~v~ik~~~~GGit----------------------e~~~ia~~A~~~g~~~ 348 (441)
T 2hxt_A 310 KQLLQAGAVDLIQIDAARVGGVN----------------------ENLAILLLAAKFGVRV 348 (441)
T ss_dssp HHHHHHTCCSEECCCTTTSSHHH----------------------HHHHHHHHHHHTTCEE
T ss_pred HHHHHcCCCCEEEeCcceeCCHH----------------------HHHHHHHHHHHcCCeE
Confidence 76665 4999999999998733 5677999999999997
No 184
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=79.44 E-value=1 Score=42.91 Aligned_cols=132 Identities=17% Similarity=0.213 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCH------HHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHHHHhhh-cCcee
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGK------READACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAEC-FDKIR 186 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~------~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al~a~~~-~~kiR 186 (706)
.+.+.+++.++.+.++|++.+=++..+. ...+.+++|++. +++|+++.-- .++.-+.++++. ++.|-
T Consensus 30 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~-----~~ipvi~~g~i~~~~~~~~~~~~Gad~V~ 104 (253)
T 1h5y_A 30 REVGDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEA-----VSIPVLVGGGVRSLEDATTLFRAGADKVS 104 (253)
T ss_dssp HEEECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHH-----CSSCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred eecccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHh-----cCCCEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 3445678889999999999877774332 345566677764 6899987543 346666677766 99999
Q ss_pred eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC-eEEEecCC----CCCchhHHHhhCCChHHHHHH
Q 005248 187 VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR-AVRIGTNH----GSLSDRIMSYYGDSPRGMVES 261 (706)
Q Consensus 187 INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~-~IRIGvN~----GSL~~~il~rygdt~eamVeS 261 (706)
|+-..+.+ -..+.+.++++|. .|.+|++. |.+. +..+-+... --.+
T Consensus 105 i~~~~~~~-------------------------~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~--v~~~~~~~~--~~~~ 155 (253)
T 1h5y_A 105 VNTAAVRN-------------------------PQLVALLAREFGSQSTVVAIDAKWNGEYYE--VYVKGGREA--TGLD 155 (253)
T ss_dssp ESHHHHHC-------------------------THHHHHHHHHHCGGGEEEEEEEEECSSSEE--EEETTTTEE--EEEE
T ss_pred EChHHhhC-------------------------cHHHHHHHHHcCCCcEEEEEEeecCCCcEE--EEEeCCeec--CCCC
Confidence 88332211 1124456666774 47777754 3111 011111000 0013
Q ss_pred HHHHHHHHHHCCCCcEEEE
Q 005248 262 AFEFARICRKLDFHNFLFS 280 (706)
Q Consensus 262 Ale~~~i~e~~~f~~iviS 280 (706)
..|.++.+++.|.+-|.+.
T Consensus 156 ~~e~~~~~~~~G~d~i~~~ 174 (253)
T 1h5y_A 156 AVKWAKEVEELGAGEILLT 174 (253)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEe
Confidence 4566777888898887664
No 185
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=79.28 E-value=18 Score=34.87 Aligned_cols=123 Identities=13% Similarity=0.140 Sum_probs=68.7
Q ss_pred HHHHHHHHcCCCEEEEecCCH-------HHHHHHHHHHHhhccCCcCcc-eeeccCCCHHHHHHHhhhcCceeeCCCCCC
Q 005248 122 EEVMRIADQGADLVRITVQGK-------READACFEIKNSLVQKNYNIP-LVADIHFAPSVALRVAECFDKIRVNPGNFA 193 (706)
Q Consensus 122 ~Qi~~L~~aGceiVRvtv~~~-------~~A~al~~I~~~L~~~g~~iP-LVADIHF~~~~Al~a~~~~~kiRINPGNig 193 (706)
+.+..++++|++-|-+...+. -..+.+.++++.|++.|..+. +.. |-.+ .+|++.-
T Consensus 16 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~--h~~~-------------~~~~~~~- 79 (287)
T 2x7v_A 16 RVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFC--HSGY-------------LINLASP- 79 (287)
T ss_dssp GHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEE--ECCT-------------TCCTTCS-
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEE--eccc-------------ccccCCC-
Confidence 445667788999999975221 123567777888888787752 222 4321 1344331
Q ss_pred cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCC
Q 005248 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 273 (706)
Q Consensus 194 ~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~ 273 (706)
+. +..++..+.++..++.|++.|.+. |-+..|+.. +.+.+...+...+.++-+-+.-
T Consensus 80 --~~-------------~~r~~~~~~~~~~i~~A~~lG~~~-v~~~~g~~~-------~~~~~~~~~~~~~~l~~l~~~~ 136 (287)
T 2x7v_A 80 --KD-------------DIWQKSVELLKKEVEICRKLGIRY-LNIHPGSHL-------GTGEEEGIDRIVRGLNEVLNNT 136 (287)
T ss_dssp --SH-------------HHHHHHHHHHHHHHHHHHHHTCCE-EEECCEECT-------TSCHHHHHHHHHHHHHHHHTTC
T ss_pred --CH-------------HHHHHHHHHHHHHHHHHHHcCCCE-EEEecCCCC-------CCCHHHHHHHHHHHHHHHHccc
Confidence 11 112334456778999999999874 555556542 1233444444555554333322
Q ss_pred CCcEEEEEecC
Q 005248 274 FHNFLFSMKAS 284 (706)
Q Consensus 274 f~~iviS~KaS 284 (706)
+.+.|.+-.-
T Consensus 137 -~gv~l~lEn~ 146 (287)
T 2x7v_A 137 -EGVVILLENV 146 (287)
T ss_dssp -CSCEEEEECC
T ss_pred -CCCEEEEeCC
Confidence 5667766543
No 186
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=79.23 E-value=3.1 Score=44.77 Aligned_cols=106 Identities=9% Similarity=0.007 Sum_probs=77.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.||.|= .| .--+.+.+++-+++|++.|.+.+==-++. .+.+.+.+|+++ +++|+.+|=.+ ++.-+.
T Consensus 225 ~G~d~~L~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 295 (426)
T 4e4f_A 225 FGFNEHLLHD--MH-HRLTPIEAARFGKSVEDYRLFWMEDPTPA-ENQACFRLIRQH-----TVTPIAVGEVFNSIWDCK 295 (426)
T ss_dssp HTTSSEEEEE--CT-TCSCHHHHHHHHHHTGGGCCSEEECCSCC-SSGGGGHHHHTT-----CCSCEEECTTCCSGGGTH
T ss_pred hCCCCEEEEE--CC-CCCCHHHHHHHHHHHhhcCCCEEECCCCh-HHHHHHHHHHhc-----CCCCEEeCCCcCCHHHHH
Confidence 4677788773 23 23467777777889999998887644442 345667778774 88999999543 465566
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
.+++ ++|-|.|.|+..|.-. ....+...|+++|+++
T Consensus 296 ~~i~~ga~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~v 333 (426)
T 4e4f_A 296 QLIEEQLIDYIRTTITHAGGIT----------------------GMRRIADFASLYQVRT 333 (426)
T ss_dssp HHHHTTCCSEECCCTTTTTHHH----------------------HHHHHHHHHHTTTCEE
T ss_pred HHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCEE
Confidence 6664 4999999999998743 5678999999999986
No 187
>1aop_A Sirhp, sulfite reductase hemoprotein; oxidoreductase, siroheme, [4Fe-4S], snirr, six-electron REDU phosphate complex; HET: SRM; 1.60A {Escherichia coli} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A*
Probab=79.15 E-value=3.7 Score=44.92 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=43.1
Q ss_pred eEeccCCCCcc--cccHHHHHHHHHHHhC----------------------------CCC-CCeEEEEcccccCcccccc
Q 005248 641 EYVSCPSCGRT--LFDLQEISAEIREKTS----------------------------HLP-GVSIAIMGCIVNGPGEMAD 689 (706)
Q Consensus 641 e~ISCPsCGRT--lfDLq~~~a~Ik~~t~----------------------------hLk-glkIAIMGCIVNGPGEmad 689 (706)
++++||.-+++ .+|.++++.+|.+.+. .|| -.||||=||--|- ....-
T Consensus 81 ni~~~p~~~~~~~~~d~~~~a~~l~~~l~~~~~~~~e~wl~~~~~~~~~~~p~~~~~~LP~Kfkiavsg~~~~~-~~~~~ 159 (497)
T 1aop_A 81 NVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQND-IDLHA 159 (497)
T ss_dssp CCEECSSCSSTTHHHHHHHHHHHHHHHTCC--------------------------CCCSSCBCEEEECTTBCT-TCGGG
T ss_pred CcccCCcccCChhHHHHHHHHHHHHHHhhhccchhhhhhccccccccccCCcccccCCCCCcEEEEEecCCccc-cCccc
Confidence 57899964454 4899999999987764 277 6899999998554 44568
Q ss_pred Cceeeecc
Q 005248 690 ADFGYVGG 697 (706)
Q Consensus 690 AD~GyvG~ 697 (706)
+|+|++|.
T Consensus 160 ~Dig~i~~ 167 (497)
T 1aop_A 160 NDMNFVAI 167 (497)
T ss_dssp SSEEEEEE
T ss_pred CCeEEEEE
Confidence 99999886
No 188
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=79.11 E-value=30 Score=34.20 Aligned_cols=160 Identities=12% Similarity=0.058 Sum_probs=93.2
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC----CHH----HHHHHHHHHHhhccCCcCcceee-cc-----
Q 005248 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ----GKR----EADACFEIKNSLVQKNYNIPLVA-DI----- 168 (706)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~----~~~----~A~al~~I~~~L~~~g~~iPLVA-DI----- 168 (706)
.+.++|.+-. ..+.+.. +..++++|.+-|=+... +.. ..+.+.++++.|++.|..+.-+. ..
T Consensus 4 klg~~~~~~~-~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~ 79 (340)
T 2zds_A 4 NFTLFTGQWA-DLPLEEV---CRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAV 79 (340)
T ss_dssp CEEEESGGGT-TSCHHHH---HHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHH
T ss_pred ceEEeecccC-CCCHHHH---HHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEeecccccccc
Confidence 3556665544 3455544 45566789999998862 221 12457788888888888775432 11
Q ss_pred -C--C----------------CHH-----------HHH-HHhhh-cCceeeCCCCCCcch-hhccccccchHHHHHHHhh
Q 005248 169 -H--F----------------APS-----------VAL-RVAEC-FDKIRVNPGNFADRR-AQFEQLEYTDDEYQKELQH 215 (706)
Q Consensus 169 -H--F----------------~~~-----------~Al-~a~~~-~~kiRINPGNig~~~-k~F~~~~YtdeeY~~El~~ 215 (706)
| + ++. .++ .|.+. +..|++.||....+. ..|... .++.+.+.+++
T Consensus 80 ~~p~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~ 157 (340)
T 2zds_A 80 CDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPA--PESMIERGYQD 157 (340)
T ss_dssp HCSCCSHHHHHHSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCC--CHHHHHHHHHH
T ss_pred ccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCC--cccchHHHHHH
Confidence 0 1 220 112 23333 888999999763211 001100 12336677889
Q ss_pred HHhhHHHHHHHHHHcCCeEEEec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCC-CCcEEEEEecC
Q 005248 216 IEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD-FHNFLFSMKAS 284 (706)
Q Consensus 216 I~~~f~~vv~~ake~~~~IRIGv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~-f~~iviS~KaS 284 (706)
+.+.+.++.+.|+++|+ +|++ ||..- +..+++ +..+++++.| -.++-+-+=..
T Consensus 158 ~~~~l~~l~~~a~~~Gv--~l~lEn~~~~-------~~~~~~-------~~~~ll~~v~~~~~vg~~~D~~ 212 (340)
T 2zds_A 158 FADRWNPILDVFDAEGV--RFAHEVHPSE-------IAYDYW-------TTHRALEAVGHRPAFGLNFDPS 212 (340)
T ss_dssp HHHHHHHHHHHHHHHTC--EEEEECCTTS-------SCCSHH-------HHHHHHHHTTTCTTEEEEECCH
T ss_pred HHHHHHHHHHHHHHcCC--EEEEEcCCCc-------ccCCHH-------HHHHHHHhcCCCCCeeEEEchh
Confidence 99999999999999997 5566 44321 112332 3466777777 56666655433
No 189
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=78.82 E-value=7.5 Score=42.57 Aligned_cols=104 Identities=14% Similarity=0.126 Sum_probs=78.3
Q ss_pred CHHHHHHHHHH-HHHcCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhh--hcCceeeCC
Q 005248 116 DVAGTVEEVMR-IADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAE--CFDKIRVNP 189 (706)
Q Consensus 116 Dv~atv~Qi~~-L~~aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~--~~~kiRINP 189 (706)
+.+..++-+++ |.+.+ |+=|-=| ..++-+.+.++++++ +.++||++|=.| |++-...+++ +++-|.|.+
T Consensus 290 t~~eai~~~~~lle~y~--i~~IEdPl~~dD~eg~~~L~~~~---~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv 364 (449)
T 3uj2_A 290 ASEELVAHWKSLCERYP--IVSIEDGLDEEDWEGWQYMTREL---GDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKL 364 (449)
T ss_dssp EHHHHHHHHHHHHHHSC--EEEEESCSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH
T ss_pred CHHHHHHHHHHHHHhcC--ceEEECCCCcchHHHHHHHHHHh---CCCceEECCcceeCCHHHHHHHHHcCCCCEEEECc
Confidence 44555655655 66655 7777644 245678899998864 458999999776 7888887776 499999999
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchh
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~ 246 (706)
..+|.-. ...++++.|+++|+++=++-++|.-++.
T Consensus 365 ~~iGGiT----------------------ea~kia~lA~~~Gi~~~v~H~sgET~d~ 399 (449)
T 3uj2_A 365 NQIGTVS----------------------ETLEAIKMAHKAGYTAVVSHRSGETEDT 399 (449)
T ss_dssp HHHCSHH----------------------HHHHHHHHHHHTTCEEEEECCSBCCSCC
T ss_pred cccCCHH----------------------HHHHHHHHHHHcCCeEEEeCCCCCchHH
Confidence 9998733 4577999999999998888888866543
No 190
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=78.81 E-value=14 Score=37.14 Aligned_cols=101 Identities=20% Similarity=0.240 Sum_probs=63.6
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH------H-------H-------HHHHHHHHhhccCCcCcceeec
Q 005248 108 TMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR------E-------A-------DACFEIKNSLVQKNYNIPLVAD 167 (706)
Q Consensus 108 SMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~------~-------A-------~al~~I~~~L~~~g~~iPLVAD 167 (706)
+.++.| -|.+.+++.++.|.++|+|++=+-+|-.+ . | +...++.+++++.+.++|++.=
T Consensus 22 ~i~~gd-p~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm 100 (268)
T 1qop_A 22 FVTLGD-PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLL 100 (268)
T ss_dssp EEETTS-SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred EeeCCC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEE
Confidence 444444 46688999999999999999999986521 0 1 1122334444444578998773
Q ss_pred cCCCH-------HHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 168 IHFAP-------SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 168 IHF~~-------~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
.-+|| +.+..++++ ++.+=+..--+ +...++++.||++|+..
T Consensus 101 ~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~-------------------------e~~~~~~~~~~~~g~~~ 150 (268)
T 1qop_A 101 MYANLVFNNGIDAFYARCEQVGVDSVLVADVPV-------------------------EESAPFRQAALRHNIAP 150 (268)
T ss_dssp ECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCG-------------------------GGCHHHHHHHHHTTCEE
T ss_pred EcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCH-------------------------HHHHHHHHHHHHcCCcE
Confidence 34454 445566665 77665531110 23567889999999864
No 191
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=78.75 E-value=23 Score=37.30 Aligned_cols=210 Identities=16% Similarity=0.182 Sum_probs=122.3
Q ss_pred eEEEceeecCCCCceEEEeccCCCC--CC---HHHHHHHHHHHHHcCCCEE-----EEec-----------CCHHHHHHH
Q 005248 90 TVMVGNVAIGSEHPIRVQTMTTNDT--KD---VAGTVEEVMRIADQGADLV-----RITV-----------QGKREADAC 148 (706)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T--~D---v~atv~Qi~~L~~aGceiV-----Rvtv-----------~~~~~A~al 148 (706)
.++||++.+ .|.|+.-.||.... .| ++..++...+.+ |+-+| -|.- -+.+..+.+
T Consensus 8 P~~ig~~~l--~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA--g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~ 83 (364)
T 1vyr_A 8 PLKVGAVTA--PNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRA--SAGLIISEATQISAQAKGYAGAPGLHSPEQIAAW 83 (364)
T ss_dssp CEEETTEEE--SSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTT--TSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHH
T ss_pred CeeECCEEE--CCccEECCCCCCcccCCCCCCCHHHHHHHHHHh--cCCEEEEccccccccccCCCCCcccCCHHHHHHH
Confidence 478888888 68999999997643 23 466666666655 55454 2221 145566789
Q ss_pred HHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcch-------------hhc-cccccchHHHHHHHh
Q 005248 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRR-------------AQF-EQLEYTDDEYQKELQ 214 (706)
Q Consensus 149 ~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~-------------k~F-~~~~YtdeeY~~El~ 214 (706)
+.+.+...+.|. ++++=++--.+.+......-..--+-|-.+-... ..| ...+.|.+ |++
T Consensus 84 ~~l~~~vh~~g~--~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~----eI~ 157 (364)
T 1vyr_A 84 KKITAGVHAEDG--RIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELD----EIP 157 (364)
T ss_dssp HHHHHHHHHTTC--CEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGG----GHH
T ss_pred HHHHHHHHhcCC--eEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHH----HHH
Confidence 999887777775 5555554333332111000000011222221100 001 23445554 667
Q ss_pred hHHhhHHHHHHHHHHcCC-eEEEecCCCCCchhHH--------HhhCCChHHHHHHHHHHHHHHH-HCCCCcEEEEEecC
Q 005248 215 HIEEVFSPLVEKCKKYGR-AVRIGTNHGSLSDRIM--------SYYGDSPRGMVESAFEFARICR-KLDFHNFLFSMKAS 284 (706)
Q Consensus 215 ~I~~~f~~vv~~ake~~~-~IRIGvN~GSL~~~il--------~rygdt~eamVeSAle~~~i~e-~~~f~~iviS~KaS 284 (706)
.+-+.|..-.+.|++.|. .|-|=.-||-|=..++ .+||.+.+.=..-++|-++-++ ..|-+ .|++|-|
T Consensus 158 ~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~--~v~vrls 235 (364)
T 1vyr_A 158 GIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD--RIGIRVS 235 (364)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG--GEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC--cEEEEEc
Confidence 777888888888899885 7888666887754444 4577655554455555555443 34433 5677766
Q ss_pred Ch---------hHHHHHHHHHHHhhhcCCCCCccccc
Q 005248 285 NP---------VVMVQAYRLLVAEMYVHGWDYPLHLG 312 (706)
Q Consensus 285 nv---------~~~i~ayrlla~~~~~eg~~YPLHLG 312 (706)
-- ....+-+..|++++++.|.|| ||+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~-i~v~ 271 (364)
T 1vyr_A 236 PIGTFQNVDNGPNEEADALYLIEELAKRGIAY-LHMS 271 (364)
T ss_dssp CSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSE-EEEE
T ss_pred cccccccccCCCCCHHHHHHHHHHHHHhCCCE-EEEe
Confidence 32 125566777888888889887 6654
No 192
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=78.60 E-value=18 Score=38.51 Aligned_cols=122 Identities=13% Similarity=0.173 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCH-----------HHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhh
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQGK-----------READACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAE 180 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~~-----------~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~ 180 (706)
..+.+..++|+.++.+.|...+.+-+-.. ++.+.++.||+.+ + +++|..|-|- ++.-|+..++
T Consensus 163 ~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~---~-d~~L~vDaN~~w~~~~A~~~~~ 238 (393)
T 3u9i_A 163 TGSVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVA---P-TARLILDGNCGYTAPDALRLLD 238 (393)
T ss_dssp ---CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHS---T-TSEEEEECCSCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHC---C-CCeEEEEccCCCCHHHHHHHHH
Confidence 35678999999999999999999987544 5778888888874 2 4799999875 4555666666
Q ss_pred hc--Cceee-------CCCCCCcchhhcc----------ccccchHHHHHHHhh--HH-----------hhHHHHHHHHH
Q 005248 181 CF--DKIRV-------NPGNFADRRAQFE----------QLEYTDDEYQKELQH--IE-----------EVFSPLVEKCK 228 (706)
Q Consensus 181 ~~--~kiRI-------NPGNig~~~k~F~----------~~~YtdeeY~~El~~--I~-----------~~f~~vv~~ak 228 (706)
.+ +.++| .|.|+..-+ .+. +..||-.+|.+-++. ++ ....++.+.|+
T Consensus 239 ~L~~~~~~i~~iEeP~~~~d~~~~~-~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~GGit~~~~ia~~A~ 317 (393)
T 3u9i_A 239 MLGVHGIVPALFEQPVAKDDEEGLR-RLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMKCGIVEALDIAAIAR 317 (393)
T ss_dssp TTTTTTCCCSEEECCSCTTCTTHHH-HHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHCHHHHHHHHHHHH
T ss_pred HHhhCCCCeEEEECCCCCCcHHHHH-HHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccccCHHHHHHHHHHHH
Confidence 67 66664 566764422 121 234555555553332 10 33566888899
Q ss_pred HcCCeEEEecCC
Q 005248 229 KYGRAVRIGTNH 240 (706)
Q Consensus 229 e~~~~IRIGvN~ 240 (706)
++|+++=+|...
T Consensus 318 ~~gi~~~~~~~~ 329 (393)
T 3u9i_A 318 TAGLHLMIGGMV 329 (393)
T ss_dssp HHTCEEEECCSS
T ss_pred HcCCeEEecCCc
Confidence 999998776543
No 193
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=78.54 E-value=4.3 Score=42.45 Aligned_cols=112 Identities=12% Similarity=0.124 Sum_probs=77.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+++|= .| ..-|.+.+++-+++|++.|.+.+==-++ ..+.+.+..++++ +++|+.+|=.+ ++.-+.
T Consensus 182 ~g~~~~l~vD--an-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 252 (367)
T 3dg3_A 182 FGDAIELYVD--GN-RGWSAAESLRAMREMADLDLLFAEELCP-ADDVLSRRRLVGQ-----LDMPFIADESVPTPADVT 252 (367)
T ss_dssp HGGGSEEEEE--CT-TCSCHHHHHHHHHHTTTSCCSCEESCSC-TTSHHHHHHHHHH-----CSSCEEECTTCSSHHHHH
T ss_pred hCCCCEEEEE--CC-CCCCHHHHHHHHHHHHHhCCCEEECCCC-cccHHHHHHHHHh-----CCCCEEecCCcCCHHHHH
Confidence 4666677663 12 2235666777778888888777642222 1346677788875 78999999654 466666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
.+++ .+|-|.|.|... .-. ...++...|+++|+++=+|-+++
T Consensus 253 ~~i~~~~~d~v~~k~~~~-Git----------------------~~~~ia~~A~~~gi~~~~~~~~e 296 (367)
T 3dg3_A 253 REVLGGSATAISIKTART-GFT----------------------GSTRVHHLAEGLGLDMVMGNQID 296 (367)
T ss_dssp HHHHHTSCSEEEECHHHH-TTH----------------------HHHHHHHHHHHHTCEEEECCSSC
T ss_pred HHHHcCCCCEEEeehhhh-hHH----------------------HHHHHHHHHHHcCCeEEECCcCC
Confidence 6655 499999999887 312 45679999999999998775443
No 194
>2akj_A Ferredoxin--nitrite reductase, chloroplast; X-RAY crystallography, heme, electron transport, oxidoreductase; HET: SRM; 2.80A {Spinacia oleracea} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1
Probab=78.46 E-value=2.7 Score=47.64 Aligned_cols=70 Identities=16% Similarity=0.221 Sum_probs=50.4
Q ss_pred HHHHHHhhcccCC------ceEeccCCCC---cccccHHHHHHHHHHHhC----------CCC-CCeEEEEcccccCccc
Q 005248 627 FNLLQGCRMRNTK------TEYVSCPSCG---RTLFDLQEISAEIREKTS----------HLP-GVSIAIMGCIVNGPGE 686 (706)
Q Consensus 627 ~~ILqa~rlR~~k------te~ISCPsCG---RTlfDLq~~~a~Ik~~t~----------hLk-glkIAIMGCIVNGPGE 686 (706)
+.-|.+.|+-... -++.+||..| .-.+|...++.+|.+.+. .|| -.||||=||--| -..
T Consensus 206 ~~~L~~~Gl~~~~~~gd~~Rnv~~~p~~g~c~~~~~D~~~~a~~l~~~l~~~~~~~~~~~~LPrKfKiavsgc~~~-c~~ 284 (608)
T 2akj_A 206 IKGLESVGLTSLQSGMDNVRNPVGNPLAGIDPHEIVDTRPFTNLISQFVTANSRGNLSITNLPRKWNPCVIGSHDL-YEH 284 (608)
T ss_dssp HHHHHTTTCCCTTCSSSSBCCCBCCTTTTTCTTCSSCCHHHHHHHHHHHTTTTTCCGGGSCCSSCBCEEECCCTTC-TTC
T ss_pred HHHHHHcCCCCCCCcCCCCCCeEeCCCcccCcchhhhHHHHHHHHHHHHhhcccCCccccccCcceEEEeccCccc-ccc
Confidence 4445555554321 1578999854 557899999999998774 366 689999999844 456
Q ss_pred cccCceeeecc
Q 005248 687 MADADFGYVGG 697 (706)
Q Consensus 687 madAD~GyvG~ 697 (706)
..-+|+|+++.
T Consensus 285 ~~~~Dig~i~~ 295 (608)
T 2akj_A 285 PHINDLAYMPA 295 (608)
T ss_dssp GGGSSEEEEEE
T ss_pred cccceEEEEEE
Confidence 67789999986
No 195
>3b0g_A NII3, nitrite reductase; siroheme, Fe4S4 binding protein, oxidoreductase; HET: SRM; 1.25A {Nicotiana tabacum} PDB: 3vkp_A* 3vkq_A* 3vkr_A* 3vks_A* 3vkt_A* 3b0n_A* 3b0m_A* 3b0j_A* 3b0l_A* 3b0h_A*
Probab=78.43 E-value=2.3 Score=47.89 Aligned_cols=70 Identities=14% Similarity=0.176 Sum_probs=50.4
Q ss_pred HHHHHHhhcccCC------ceEeccCCCCc---ccccHHHHHHHHHHHhC----------CCC-CCeEEEEcccccCccc
Q 005248 627 FNLLQGCRMRNTK------TEYVSCPSCGR---TLFDLQEISAEIREKTS----------HLP-GVSIAIMGCIVNGPGE 686 (706)
Q Consensus 627 ~~ILqa~rlR~~k------te~ISCPsCGR---TlfDLq~~~a~Ik~~t~----------hLk-glkIAIMGCIVNGPGE 686 (706)
+.-|.+.|+=... -++.+||..|+ -.+|.+.++.+|.+.+. .|| -.||||=||--| -..
T Consensus 189 ~~~L~~~gl~~~~~~gd~~Rnv~~~p~~g~c~~~~~D~~~~a~~l~~~l~~~~~~~~~~~~LPrKfKiavsgc~~~-c~~ 267 (591)
T 3b0g_A 189 LKGLAEVGLTSLQSGMDNVRNPVGNPLAGIDPEEIVDTRPYTNLLSQFITGNSRGNPAVSNLPRKWNPCVVGSHDL-YEH 267 (591)
T ss_dssp HHHHHHTTCBCTTCSSSSBCCCBCCTTTTTCTTCSSCCHHHHHHHHHHHHTTTTCCGGGSCCSSCBCEEECCCTTC-TTC
T ss_pred HHHHHHcCCCCCcCccCCCCCeEeCCCcccCcchhhhHHHHHHHHHHHHhhcccCCccccccCcceEEEEccCccc-ccc
Confidence 4455555554321 16789998554 57899999999988763 377 689999999844 455
Q ss_pred cccCceeeecc
Q 005248 687 MADADFGYVGG 697 (706)
Q Consensus 687 madAD~GyvG~ 697 (706)
..-+|+|+++.
T Consensus 268 ~~~~Dig~i~~ 278 (591)
T 3b0g_A 268 PHINDLAYMPA 278 (591)
T ss_dssp GGGSSEEEEEE
T ss_pred cccceEEEEEE
Confidence 67789999875
No 196
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=78.34 E-value=4.3 Score=38.99 Aligned_cols=155 Identities=10% Similarity=0.059 Sum_probs=88.0
Q ss_pred eEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH---HHHHHHHHHHhhccCCcCcceee-ccCCC-H------
Q 005248 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR---EADACFEIKNSLVQKNYNIPLVA-DIHFA-P------ 172 (706)
Q Consensus 104 I~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~---~A~al~~I~~~L~~~g~~iPLVA-DIHF~-~------ 172 (706)
+.+.|++- ...+.+. .+..++++|.+-|=+...... ....+.++++.|++.|..+..+. .+.|. +
T Consensus 6 ~~~~~~~~-~~~~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (281)
T 3u0h_A 6 PCLHPTLV-DETSLVL---YLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLR 81 (281)
T ss_dssp EEECGGGT-TCCCHHH---HHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHH
T ss_pred hhhcchhc-cCCCHHH---HHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEEecccccccCCCHHHHH
Confidence 44555433 3345554 455677789999988877542 34457888999999998876443 22222 1
Q ss_pred -----HHHHHHhh-h-cCcee--eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CCCC
Q 005248 173 -----SVALRVAE-C-FDKIR--VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGS 242 (706)
Q Consensus 173 -----~~Al~a~~-~-~~kiR--INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~GS 242 (706)
+.+++.++ . +..|+ +-||+-. ...+.++++.+.+.++.+.|+++|+.+ ++ ||+.
T Consensus 82 ~~~~~~~~i~~A~~lG~~~v~~~~~p~~~~--------------~~~~~~~~~~~~l~~l~~~a~~~Gv~l--~lE~~~~ 145 (281)
T 3u0h_A 82 ELSLLPDRARLCARLGARSVTAFLWPSMDE--------------EPVRYISQLARRIRQVAVELLPLGMRV--GLEYVGP 145 (281)
T ss_dssp HHHTHHHHHHHHHHTTCCEEEEECCSEESS--------------CHHHHHHHHHHHHHHHHHHHGGGTCEE--EEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeecCCCCC--------------cchhhHHHHHHHHHHHHHHHHHcCCEE--EEEeccc
Confidence 11223333 2 67777 3343210 012466788888999999999999755 54 4432
Q ss_pred CchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecC
Q 005248 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKAS 284 (706)
Q Consensus 243 L~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaS 284 (706)
-..+ ++ +-.++.+.-+..+++++.|-.++-+-+=..
T Consensus 146 ~~~~----~~--~~~~~~~~~~~~~l~~~v~~~~vg~~~D~~ 181 (281)
T 3u0h_A 146 HHLR----HR--RYPFVQSLADLKTFWEAIGAPNVGALVDSY 181 (281)
T ss_dssp GGGC----CS--SEECCCSHHHHHHHHHHHCCTTEEEEEEHH
T ss_pred cccc----cc--cccccCCHHHHHHHHHHcCCCCeeEEeehh
Confidence 1000 00 001122233455677777777777665433
No 197
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=78.14 E-value=4.1 Score=43.82 Aligned_cols=107 Identities=12% Similarity=0.120 Sum_probs=74.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+|+|=- | .--|.+.+++-+++|++.|.+.+==-++ ..+.+.+.+|+++ +++|+.+|=.+ ++.-+.
T Consensus 219 vG~d~~L~vDa--N-~~~~~~~A~~~~~~Le~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 289 (422)
T 3tji_A 219 YGWKLHILHDV--H-ERLFPQQAVQLAKQLEPFQPYFIEDILP-PQQSAWLEQVRQQ-----SCVPLALGELFNNPAEWH 289 (422)
T ss_dssp HCSSSEEEEEC--T-TCSCHHHHHHHHHHHGGGCCSEEECCSC-GGGGGGHHHHHHH-----CCCCEEECTTCCSGGGTH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhhCCCeEECCCC-hhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 45666666631 2 2235666677777888888877754343 2345667778775 78999999554 455555
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
.+++ .+|-|.|.|+..|.-. ....+...|+++|+++=
T Consensus 290 ~ll~~ga~d~v~~k~~~~GGit----------------------~~~kia~lA~a~gv~v~ 328 (422)
T 3tji_A 290 DLIVNRRIDFIRCHVSQIGGIT----------------------PALKLAHLCQAFGVRLA 328 (422)
T ss_dssp HHHHTTCCSEECCCGGGGTSHH----------------------HHHHHHHHHHHTTCEEC
T ss_pred HHHhcCCCCEEecCccccCCHH----------------------HHHHHHHHHHHcCCEEE
Confidence 5554 4999999999998733 56789999999999873
No 198
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=77.93 E-value=4.3 Score=43.13 Aligned_cols=115 Identities=12% Similarity=0.087 Sum_probs=77.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.+++|=- |. .-+.+.+++-+++|++.|.+.+==-++ .++-+.+.+++++ +++|+.+|=+ ++..-+.
T Consensus 196 vG~d~~l~vDa--N~-~~~~~~A~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 266 (388)
T 3tcs_A 196 LGDDVDLLIDA--NS-CYTPDRAIEVGHMLQDHGFCHFEEPCP-YWELAQTKQVTDA-----LDIDVTGGEQDCDLPTWQ 266 (388)
T ss_dssp HCSSSEEEEEC--TT-CCCHHHHHHHHHHHHHTTCCEEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCCHHHHH
T ss_pred hCCCCeEEEeC--CC-CcCHHHHHHHHHHHhhcCCeEEECCCC-ccCHHHHHHHHHh-----cCCCEEcCCccCCHHHHH
Confidence 45666666631 11 124566666677888888776643333 2345667778775 7899999965 4555555
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL 243 (706)
.+++ +++-|.+.|+..|.-. ....+...|+++|+++=++...+|+
T Consensus 267 ~~i~~~a~d~v~~d~~~~GGit----------------------~a~kia~~A~~~gv~~~~h~~~~~~ 313 (388)
T 3tcs_A 267 RMIDMRAVDIVQPDILYLGGIC----------------------RTLRVVEMARAAGLPVTPHCANWSL 313 (388)
T ss_dssp HHHHHTCCSEECCCHHHHTSHH----------------------HHHHHHHHHHHTTCCBCCCCCSTTT
T ss_pred HHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCEEEecCCCcHH
Confidence 5554 4999999999988733 5678999999999998665544443
No 199
>4g38_A SIR-HP, sirhp, sulfite reductase [NADPH] hemoprotein beta-compon; snirr, oxidoreductase, sulfite reductase flavoprotein; HET: SRM; 1.56A {Escherichia coli} PDB: 4g39_A* 1aop_A* 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A*
Probab=77.61 E-value=2.9 Score=46.91 Aligned_cols=71 Identities=14% Similarity=0.160 Sum_probs=48.4
Q ss_pred HHHHHHhhcccCC------ceEeccCC--CCcccccHHHHHHHHHHHh----------------------------CCCC
Q 005248 627 FNLLQGCRMRNTK------TEYVSCPS--CGRTLFDLQEISAEIREKT----------------------------SHLP 670 (706)
Q Consensus 627 ~~ILqa~rlR~~k------te~ISCPs--CGRTlfDLq~~~a~Ik~~t----------------------------~hLk 670 (706)
+.-|++.||-... -++++||. ||....|..+++.+|.+.+ ..||
T Consensus 134 ~~~L~~~gl~~~~a~Gd~vRNV~~~p~p~~g~~~~d~~~~a~~i~~~l~~~~~~~~e~~l~~~~~~~~~~~p~~g~~~LP 213 (570)
T 4g38_A 134 HQMLHSVGLDALATAWDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLP 213 (570)
T ss_dssp HHHHHTTTCEECCTTTCCBCCCEECSSCSSGGGHHHHHHHHHHHHHHTCC------------------------------
T ss_pred HHHHHHcCCCCccccCCCccceEecCCcccCccHHHHHHHHHHHHHhhcccchhHHHHHhccchhcccccCccccccCCC
Confidence 4556666664322 24667764 8988889999998886553 2477
Q ss_pred -CCeEEEEcccccCccccccCceeeeccC
Q 005248 671 -GVSIAIMGCIVNGPGEMADADFGYVGGA 698 (706)
Q Consensus 671 -glkIAIMGCIVNGPGEmadAD~GyvG~~ 698 (706)
-.||||=||--| -...--.|+|+++..
T Consensus 214 rKFKiavsg~~~~-~~~~~~~Dig~~a~~ 241 (570)
T 4g38_A 214 RKFKTTVVIPPQN-DIDLHANDMNFVAIA 241 (570)
T ss_dssp -CBCEEEECTTBC-TTCGGGSSEEEEEEE
T ss_pred CceEEEEECCCcc-cccCccCcEEEEEEE
Confidence 689999999754 456777899998853
No 200
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=77.47 E-value=11 Score=37.79 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=84.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcc-eeeccCCCHHHHHHHhhhcCceeeCCCCCC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIP-LVADIHFAPSVALRVAECFDKIRVNPGNFA 193 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iP-LVADIHF~~~~Al~a~~~~~kiRINPGNig 193 (706)
.|.+..+.-.+.|.+.|...++||..+....++++.|+++ ++-+ +-|.-=.++.-|..|+++=.++=+-||-
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~-----~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~~-- 94 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKA-----VPEAIVGAGTVCTADDFQKAIDAGAQFIVSPGL-- 94 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHH-----CTTSEEEEECCCSHHHHHHHHHHTCSEEEESSC--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHH-----CCCCeEeeccccCHHHHHHHHHcCCCEEEeCCC--
Confidence 5778888899999999999999999999999999999997 4434 4466677899999998874444567872
Q ss_pred cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC------eEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHH
Q 005248 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR------AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFAR 267 (706)
Q Consensus 194 ~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~------~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~ 267 (706)
+ .++++.|+++|+ |+==|+ .||.. +.
T Consensus 95 ~--------------------------~evi~~~~~~~v~~~~~~~~~PG~--------------~TptE--------~~ 126 (217)
T 3lab_A 95 T--------------------------PELIEKAKQVKLDGQWQGVFLPGV--------------ATASE--------VM 126 (217)
T ss_dssp C--------------------------HHHHHHHHHHHHHCSCCCEEEEEE--------------CSHHH--------HH
T ss_pred c--------------------------HHHHHHHHHcCCCccCCCeEeCCC--------------CCHHH--------HH
Confidence 1 358999999999 876666 34533 33
Q ss_pred HHHHCCCCcEEE
Q 005248 268 ICRKLDFHNFLF 279 (706)
Q Consensus 268 i~e~~~f~~ivi 279 (706)
.+.+.|++-+++
T Consensus 127 ~A~~~Gad~vK~ 138 (217)
T 3lab_A 127 IAAQAGITQLKC 138 (217)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHcCCCEEEE
Confidence 357899998866
No 201
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=77.44 E-value=8.2 Score=40.21 Aligned_cols=69 Identities=14% Similarity=0.245 Sum_probs=53.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC---------HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhc
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQG---------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECF 182 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~---------~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~ 182 (706)
..+.+..++++.++.++|.+.|.+-+-. ..+.+.++.||+.+ |-++||..|.| |++.-|+..++.+
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~---g~d~~l~vDan~~~~~~~a~~~~~~l 223 (382)
T 1rvk_A 147 LATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV---GPDIRLMIDAFHWYSRTDALALGRGL 223 (382)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH---CTTSEEEEECCTTCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHH
Confidence 3578999999999999999999998764 45677888888753 56899999998 5555565555555
Q ss_pred Cce
Q 005248 183 DKI 185 (706)
Q Consensus 183 ~ki 185 (706)
++.
T Consensus 224 ~~~ 226 (382)
T 1rvk_A 224 EKL 226 (382)
T ss_dssp HTT
T ss_pred Hhc
Confidence 554
No 202
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=77.41 E-value=6.6 Score=41.38 Aligned_cols=85 Identities=15% Similarity=0.243 Sum_probs=58.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccC--CCHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPS 173 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~ 173 (706)
+||..+=.|..-.+....|.+..++++.++.+.|...+.+-+-. .++.+.++.||+. -|-++||..|.| |++.
T Consensus 127 lGg~~r~~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~~~~~d~~~v~avR~a---~g~~~~l~vDan~~~~~~ 203 (378)
T 3eez_A 127 MGGGSRTPRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGGDVERDIARIRDVEDI---REPGEIVLYDVNRGWTRQ 203 (378)
T ss_dssp TTCCCCSCEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHTTS---CCTTCEEEEECTTCCCHH
T ss_pred hCCCCCCeEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHH---cCCCceEEEECCCCCCHH
Confidence 35543333333334445678999999999999999999998753 2556666666653 356899999998 5666
Q ss_pred HHHHHhhhcCce
Q 005248 174 VALRVAECFDKI 185 (706)
Q Consensus 174 ~Al~a~~~~~ki 185 (706)
-|+..++.++.+
T Consensus 204 ~a~~~~~~l~~~ 215 (378)
T 3eez_A 204 QALRVMRATEDL 215 (378)
T ss_dssp HHHHHHHHTGGG
T ss_pred HHHHHHHHhccC
Confidence 666666666654
No 203
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=77.29 E-value=11 Score=41.59 Aligned_cols=98 Identities=13% Similarity=0.259 Sum_probs=63.5
Q ss_pred HHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHhhccCCc-Ccceee-ccCCCHHHHHHHhhh-cCceee--CCCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNY-NIPLVA-DIHFAPSVALRVAEC-FDKIRV--NPGN 191 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~---~~A~al~~I~~~L~~~g~-~iPLVA-DIHF~~~~Al~a~~~-~~kiRI--NPGN 191 (706)
+.+.+..|.++|+++|=|..... ...+.+++|++. + ++|+|+ ++. ++..|..++++ +|.|.+ -||.
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~-----~~~~~vi~g~v~-t~e~a~~~~~aGad~i~vg~g~gs 330 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAK-----YPSLNIIAGNVA-TAEATKALIEAGANVVKVGIGPGS 330 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH-----CTTSEEEEEEEC-SHHHHHHHHHHTCSEEEECSSCST
T ss_pred hHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHh-----CCCceEEeeeec-cHHHHHHHHHhCCCEEEECCCCcc
Confidence 57888999999999999976543 344566777764 4 389887 655 78889988887 898886 4444
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
+...+. +...- ..--+.+.++.+.|+++++||
T Consensus 331 i~~~~~-~~g~g----------~p~~~~l~~v~~~~~~~~iPV 362 (511)
T 3usb_A 331 ICTTRV-VAGVG----------VPQLTAVYDCATEARKHGIPV 362 (511)
T ss_dssp TCCHHH-HHCCC----------CCHHHHHHHHHHHHHTTTCCE
T ss_pred cccccc-ccCCC----------CCcHHHHHHHHHHHHhCCCcE
Confidence 322110 00000 000123455777888889998
No 204
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=77.29 E-value=13 Score=35.52 Aligned_cols=127 Identities=15% Similarity=0.245 Sum_probs=74.5
Q ss_pred HHHHHHHHcCCCEEEEecCCH--HHHHHHHHHHHhhccCCcCcceeec---cCC---CHH----------HHH-HHhhh-
Q 005248 122 EEVMRIADQGADLVRITVQGK--READACFEIKNSLVQKNYNIPLVAD---IHF---APS----------VAL-RVAEC- 181 (706)
Q Consensus 122 ~Qi~~L~~aGceiVRvtv~~~--~~A~al~~I~~~L~~~g~~iPLVAD---IHF---~~~----------~Al-~a~~~- 181 (706)
+.+..++++|.+ |=+..... .....++++++.+. | .+.+.+. +.+ ++. .++ .|.+.
T Consensus 14 ~~l~~~~~~G~~-vEl~~~~~~~~~~~~~~~~~~~~~--~-~~~~h~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~~lG 89 (254)
T 3ayv_A 14 EALPRLQALGLG-AEVYLDPALLEEDALFQSLRRRFS--G-KLSVHLPFWNLDLLSPDPEVRGLTLRRLLFGLDRAAELG 89 (254)
T ss_dssp HHHHHHHHHTCE-EEEECCGGGTTCHHHHHHHHHHCC--S-CEEEECCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCC-EEEeccccccCcHHHHHHHHHHhC--C-CeEEecCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 345556677998 77754432 21226778887765 4 3333332 222 221 122 23333
Q ss_pred cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CCCCCchhHHHhhCCChHHHHH
Q 005248 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVE 260 (706)
Q Consensus 182 ~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~GSL~~~il~rygdt~eamVe 260 (706)
+..|++.||...... ...+.+.++++.+.+.++.+.|+++|+. |++ |++. .+++
T Consensus 90 a~~v~~~~g~~~~~~---------~~~~~~~~~~~~~~l~~l~~~a~~~gv~--l~lEn~~~----------~~~~---- 144 (254)
T 3ayv_A 90 ADRAVFHSGIPHGRT---------PEEALERALPLAEALGLVVRRARTLGVR--LLLENSHE----------PHPE---- 144 (254)
T ss_dssp CSEEEEECCCCTTCC---------HHHHHHTHHHHHHHTHHHHHHHHHHTCE--EEEECSSC----------SSGG----
T ss_pred CCEEEECCCCCcccc---------cccHHHHHHHHHHHHHHHHHHHhhcCCE--EEEcCCCC----------CCHH----
Confidence 888999999764321 1135566788899999999999999975 455 5532 1332
Q ss_pred HHHHHHHHHHHCCCCcEEEEE
Q 005248 261 SAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 261 SAle~~~i~e~~~f~~iviS~ 281 (706)
+..+++++.| .++-+-+
T Consensus 145 ---~~~~l~~~v~-~~vg~~~ 161 (254)
T 3ayv_A 145 ---ALRPVLEAHA-GELGFCF 161 (254)
T ss_dssp ---GTHHHHHHHT-TSSEEEE
T ss_pred ---HHHHHHHhcC-cCEEEEE
Confidence 3446666666 6666655
No 205
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=77.24 E-value=3.2 Score=44.08 Aligned_cols=108 Identities=10% Similarity=0.080 Sum_probs=74.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.||+|= .| .--|.+.+++=+++|++.|.+.+==-++. .+.+.+.+|++ .+++|+.+|=. +++.-+.
T Consensus 198 ~G~d~~l~vD--an-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~-~~~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~ 268 (401)
T 3sbf_A 198 YGNQFHILHD--VH-ERLFPNQAIQFAKEVEQYKPYFIEDILPP-NQTEWLDNIRS-----QSSVSLGLGELFNNPEEWK 268 (401)
T ss_dssp HTTSSEEEEE--CT-TCSCHHHHHHHHHHHGGGCCSCEECSSCT-TCGGGHHHHHT-----TCCCCEEECTTCCSHHHHH
T ss_pred cCCCCEEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCCh-hHHHHHHHHHh-----hCCCCEEeCCccCCHHHHH
Confidence 4556666663 12 12356666666777888887776533431 23455666766 37899999955 4567777
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
.+++ ++|-|.|.|+..|.-. ....+...|+++|+++=+
T Consensus 269 ~~i~~~~~d~v~~k~~~~GGit----------------------~~~kia~~A~~~gi~~~~ 308 (401)
T 3sbf_A 269 SLIANRRIDFIRCHVSQIGGIT----------------------PALKLGHLCQNFGVRIAW 308 (401)
T ss_dssp HHHHTTCCSEECCCGGGGTSHH----------------------HHHHHHHHHHHHTCEECC
T ss_pred HHHhcCCCCEEecCccccCCHH----------------------HHHHHHHHHHHcCCEEEe
Confidence 7765 4999999999998733 567899999999998733
No 206
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=77.11 E-value=5.1 Score=43.37 Aligned_cols=106 Identities=7% Similarity=0.011 Sum_probs=73.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.+|+|= .| ..-|.+.+++=+++|++.|.+.+==-++ .++.+.+.+|+++ +++|+.+|=. +++.-+.
T Consensus 237 ~G~d~~L~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 307 (440)
T 3t6c_A 237 LGFSVELLHD--AH-ERITPINAIHMAKALEPYQLFFLEDPVA-PENTEWLKMLRQQ-----SSTPIAMGELFVNVNEWK 307 (440)
T ss_dssp HCSSSEEEEE--CT-TCSCHHHHHHHHHHTGGGCCSEEECSSC-GGGGGGHHHHHHH-----CCSCEEECTTCCSHHHHH
T ss_pred cCCCCeEEEE--CC-CCCCHHHHHHHHHHhhhcCCCEEECCCC-hhhHHHHHHHHhh-----cCCCEEeCcccCCHHHHH
Confidence 4555566553 11 1224566666667777778777653343 2345567777775 7899999954 4566666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
.+++ +++-|.|.|+..|.-. ....+...|+++|+++
T Consensus 308 ~~i~~~a~d~v~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~ 345 (440)
T 3t6c_A 308 PLIDNKLIDYIRCHISSIGGIT----------------------PAKKIAIYSELNGVRT 345 (440)
T ss_dssp HHHHTTCCSEECCCGGGGTSHH----------------------HHHHHHHHHHHTTCEE
T ss_pred HHHHcCCccceeechhhhCCHH----------------------HHHHHHHHHHHcCCEE
Confidence 6665 4999999999998733 5678999999999987
No 207
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=77.03 E-value=10 Score=40.34 Aligned_cols=67 Identities=18% Similarity=0.377 Sum_probs=50.3
Q ss_pred HHHHHHHHHHcCCCEEEEec---CCHHHHHHHHHHHHhhccCCc-Ccceee-ccCCCHHHHHHHhhh-cCceee--CCCC
Q 005248 120 TVEEVMRIADQGADLVRITV---QGKREADACFEIKNSLVQKNY-NIPLVA-DIHFAPSVALRVAEC-FDKIRV--NPGN 191 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv---~~~~~A~al~~I~~~L~~~g~-~iPLVA-DIHF~~~~Al~a~~~-~~kiRI--NPGN 191 (706)
+.+++..|.++|+++|=|.+ ++....+.+++|++. + ++|+++ .+ .++..|..+.++ +|-|.+ -||-
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~-----~p~v~Vi~G~v-~t~e~A~~a~~aGAD~I~vG~gpGs 182 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA-----YPHLEIIGGNV-ATAEGARALIEAGVSAVKVGIGPGS 182 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH-----CTTCEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCST
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHh-----cCCCceEeeee-CCHHHHHHHHHcCCCEEEEecCCCC
Confidence 56788899999999998854 344556677888875 4 688876 44 478889988887 999988 3664
Q ss_pred C
Q 005248 192 F 192 (706)
Q Consensus 192 i 192 (706)
+
T Consensus 183 ~ 183 (366)
T 4fo4_A 183 I 183 (366)
T ss_dssp T
T ss_pred C
Confidence 4
No 208
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=76.90 E-value=7.1 Score=41.33 Aligned_cols=107 Identities=12% Similarity=0.144 Sum_probs=76.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (706)
+|.+.+++|=- | ..-+.+.+++-+++|++.|.+.+==-++- ++-+.+.+++++ +++|+.+|=... +.-+.
T Consensus 210 ~G~~~~l~vDa--N-~~~~~~~A~~~~~~l~~~~i~~iEeP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 280 (383)
T 3toy_A 210 LGPDIALMLDF--N-QSLDPAEATRRIARLADYDLTWIEEPVPQ-ENLSGHAAVRER-----SEIPIQAGENWWFPRGFA 280 (383)
T ss_dssp HCTTSEEEEEC--T-TCSCHHHHHHHHHHHGGGCCSEEECCSCT-TCHHHHHHHHHH-----CSSCEEECTTCCHHHHHH
T ss_pred hCCCCeEEEeC--C-CCCCHHHHHHHHHHHHhhCCCEEECCCCc-chHHHHHHHHhh-----cCCCEEeCCCcCCHHHHH
Confidence 57777777742 2 12346777777888888888776533331 245667788875 789999996654 55555
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
.+++ +++-|.|.|...|.-. ....+...|+++|+++=
T Consensus 281 ~~i~~~a~d~v~ik~~~~GGit----------------------~~~~ia~~A~~~gi~~~ 319 (383)
T 3toy_A 281 EAIAAGASDFIMPDLMKVGGIT----------------------GWLNVAGQADAASIPMS 319 (383)
T ss_dssp HHHHHTCCSEECCCTTTTTHHH----------------------HHHHHHHHHHHHTCCBC
T ss_pred HHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCEEe
Confidence 6654 4999999999998733 56789999999999973
No 209
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=76.69 E-value=2.6 Score=47.69 Aligned_cols=67 Identities=24% Similarity=0.334 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHcCCCEEEEecC-------------CHHHHHHHHHHHHhhccCCcCcceeec--cCCCHHHHHHHhhhcC
Q 005248 119 GTVEEVMRIADQGADLVRITVQ-------------GKREADACFEIKNSLVQKNYNIPLVAD--IHFAPSVALRVAECFD 183 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRvtv~-------------~~~~A~al~~I~~~L~~~g~~iPLVAD--IHF~~~~Al~a~~~~~ 183 (706)
+|.++.+.|.++|+|.|+|-+- +.-.+-++.++.+..+ ++.+|+||| |+|...+|.+=+-.++
T Consensus 331 aT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~--~~~vpvIADGGI~~sGDi~KAlaaGAd 408 (556)
T 4af0_A 331 VTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFAS--RFGIPCIADGGIGNIGHIAKALALGAS 408 (556)
T ss_dssp CSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHG--GGTCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHH--HcCCCEEecCCcCcchHHHHHhhcCCC
Confidence 4567778899999999998521 1223455555554332 477999999 9999999875544577
Q ss_pred ceee
Q 005248 184 KIRV 187 (706)
Q Consensus 184 kiRI 187 (706)
.|=|
T Consensus 409 ~VMl 412 (556)
T 4af0_A 409 AVMM 412 (556)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7766
No 210
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=76.50 E-value=6.3 Score=39.87 Aligned_cols=52 Identities=15% Similarity=0.326 Sum_probs=37.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceee
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVA 166 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVA 166 (706)
|-+.+.-.+.+.++.+.|||||+|++. +.++.-.|-+...+. +...+.|+||
T Consensus 152 tP~~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll~~~~~~-~~~~~~P~I~ 205 (257)
T 2yr1_A 152 TPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEA-RRELAIPLIT 205 (257)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHH-HHHCSSCEEE
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHHHHHHHH-hccCCCCEEE
Confidence 444677888889999999999999975 556666666555554 2344688876
No 211
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=76.45 E-value=8.2 Score=41.67 Aligned_cols=69 Identities=16% Similarity=0.296 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---------------HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHH
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---------------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALR 177 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---------------~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~ 177 (706)
.+.+..+++++++.+.|...+++-+-. .++.+.++.||+.+ |-++||..|.| |++.-|+.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~av---G~d~~L~vDan~~~t~~~A~~ 221 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAV---GDKADLLFGTHGQFTTAGAIR 221 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHH---TTSSEEEECCCSCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHh---CCCCeEEEeCCCCCCHHHHHH
Confidence 678999999999999999999997531 23566677777653 67899999998 45555666
Q ss_pred HhhhcCcee
Q 005248 178 VAECFDKIR 186 (706)
Q Consensus 178 a~~~~~kiR 186 (706)
.++.+++..
T Consensus 222 ~~~~Le~~~ 230 (433)
T 3rcy_A 222 LGQAIEPYS 230 (433)
T ss_dssp HHHHHGGGC
T ss_pred HHHHhhhcC
Confidence 566666553
No 212
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=76.23 E-value=73 Score=35.05 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=84.3
Q ss_pred HHHHHHHHcCCCEEEEecC----------CHHHHHHHHHHHHhhccCCcCcceeecc---------CCCHH----HHHHH
Q 005248 122 EEVMRIADQGADLVRITVQ----------GKREADACFEIKNSLVQKNYNIPLVADI---------HFAPS----VALRV 178 (706)
Q Consensus 122 ~Qi~~L~~aGceiVRvtv~----------~~~~A~al~~I~~~L~~~g~~iPLVADI---------HF~~~----~Al~a 178 (706)
+=+..|.++|.+.+=+.-| +.++.+.+..|++.+. ++++.+=+ |+.-+ -...|
T Consensus 34 ~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~----~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a 109 (464)
T 2nx9_A 34 PIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMP----NTPLQMLLRGQNLLGYRHYADDVVDTFVERA 109 (464)
T ss_dssp GGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCS----SSCEEEEECGGGTTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCC----CCeEEEEeccccccCcccccchhhHHHHHHH
Confidence 3346788999999999864 4577888999988532 23333222 33221 12345
Q ss_pred hhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec--CCCCCchhHHHhhCCCh
Q 005248 179 AEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT--NHGSLSDRIMSYYGDSP 255 (706)
Q Consensus 179 ~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv--N~GSL~~~il~rygdt~ 255 (706)
+++ ++-|||- .-.-+ + +++.+.|+.||++|..++.-+ -.|+ +| ++
T Consensus 110 ~~~Gvd~i~if-~~~sd----~------------------~ni~~~i~~ak~~G~~v~~~i~~~~~~-------~~--~~ 157 (464)
T 2nx9_A 110 VKNGMDVFRVF-DAMND----V------------------RNMQQALQAVKKMGAHAQGTLCYTTSP-------VH--NL 157 (464)
T ss_dssp HHTTCCEEEEC-CTTCC----T------------------HHHHHHHHHHHHTTCEEEEEEECCCCT-------TC--CH
T ss_pred HhCCcCEEEEE-EecCH----H------------------HHHHHHHHHHHHCCCEEEEEEEeeeCC-------CC--CH
Confidence 555 8999973 11100 0 256789999999999998655 2232 22 33
Q ss_pred HHHHHHHHHHHHHHHHCCCCcEEEEEecC----ChhHHHHHHHHHHHh
Q 005248 256 RGMVESAFEFARICRKLDFHNFLFSMKAS----NPVVMVQAYRLLVAE 299 (706)
Q Consensus 256 eamVeSAle~~~i~e~~~f~~iviS~KaS----nv~~~i~ayrlla~~ 299 (706)
+-+++.++.+++.|-+ .|++|-+ .|..+-+-.+.|.++
T Consensus 158 ----e~~~~~a~~l~~~Gad--~I~l~DT~G~~~P~~v~~lv~~l~~~ 199 (464)
T 2nx9_A 158 ----QTWVDVAQQLAELGVD--SIALKDMAGILTPYAAEELVSTLKKQ 199 (464)
T ss_dssp ----HHHHHHHHHHHHTTCS--EEEEEETTSCCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHCCCC--EEEEcCCCCCcCHHHHHHHHHHHHHh
Confidence 4566777888899987 5677744 455444444445444
No 213
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=76.16 E-value=7.6 Score=42.60 Aligned_cols=100 Identities=17% Similarity=0.276 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecC---CHHHHHHHHHHHHhhccCCc-CcceeeccCCCHHHHHHHhhh-cCceee--CCCC
Q 005248 119 GTVEEVMRIADQGADLVRITVQ---GKREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAEC-FDKIRV--NPGN 191 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRvtv~---~~~~A~al~~I~~~L~~~g~-~iPLVADIHF~~~~Al~a~~~-~~kiRI--NPGN 191 (706)
.+.+++.+|.++|+++|=|.+. +....+.+++|++. + ++|+++=--.++..|..++++ +|.|.+ -||.
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~-----~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs 303 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT-----FPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGS 303 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH-----CTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCST
T ss_pred chHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH-----CCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCc
Confidence 4578899999999999987543 23556778888875 4 689887544567888888887 999997 3555
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
+...+. +...-.. . -+.+.++.+.|++.++||
T Consensus 304 ~~~t~~-~~g~g~p------~----~~~l~~v~~~~~~~~iPV 335 (490)
T 4avf_A 304 ICTTRI-VAGVGVP------Q----ISAIANVAAALEGTGVPL 335 (490)
T ss_dssp TCHHHH-HTCBCCC------H----HHHHHHHHHHHTTTTCCE
T ss_pred CCCccc-cCCCCcc------H----HHHHHHHHHHhccCCCcE
Confidence 422110 0000000 0 124456777777888988
No 214
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=76.05 E-value=8.3 Score=40.56 Aligned_cols=67 Identities=16% Similarity=0.099 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCc
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~k 184 (706)
.|.+..++++.++.++|.+.+.+-+-. ..+.+.+..||+. -|-++||..|.| |+..-|+..++.+++
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---~G~~~~l~vDan~~~~~~~a~~~~~~l~~ 215 (389)
T 2oz8_A 144 LDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTC---VPAGSKVMIDPNEAWTSKEALTKLVAIRE 215 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTT---SCTTCEEEEECTTCBCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHh---hCCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 378999999999999999999998743 3456777777764 356899999998 555666666666665
No 215
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=75.65 E-value=12 Score=39.13 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCH-HHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGK-READACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGN 191 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~-~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGN 191 (706)
|.+..++-+++|.+++..+.=|-=|-. ++-+.+.+++++ +++|+.+|=.+ ++.-+..+++ +++-|.|.|..
T Consensus 199 ~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~ 273 (365)
T 3ik4_A 199 DVERALAFCAACKAESIPMVLFEQPLPREDWAGMAQVTAQ-----SGFAVAADESARSAHDVLRIAREGTASVINIKLMK 273 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHH-----SSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CHHHHHHHHHHHhhCCCCceEEECCCCcccHHHHHHHHhh-----CCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc
Confidence 345555555666444445544443321 345666667664 78999999554 4544555444 59999999999
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
|.-. ...++++.|+++|+++=+|...
T Consensus 274 -GGit----------------------~~~~i~~~A~~~gi~~~~~~~~ 299 (365)
T 3ik4_A 274 -AGVA----------------------EGLKMIAIAQAAGLGLMIGGMV 299 (365)
T ss_dssp -HCHH----------------------HHHHHHHHHHHHTCEEEECCSS
T ss_pred -cCHH----------------------HHHHHHHHHHHcCCeEEecCCc
Confidence 8733 5677999999999999877543
No 216
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=75.58 E-value=17 Score=34.84 Aligned_cols=136 Identities=17% Similarity=0.190 Sum_probs=76.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCHH-------HHHHHHHHHHhhccCCcCcc-ee--e--ccCC---CHHH----------H
Q 005248 121 VEEVMRIADQGADLVRITVQGKR-------EADACFEIKNSLVQKNYNIP-LV--A--DIHF---APSV----------A 175 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~~-------~A~al~~I~~~L~~~g~~iP-LV--A--DIHF---~~~~----------A 175 (706)
.+.+..++++|++-|-+...+.. ..+.+.++++.|.+.|+.+. +. + ++.+ ++.. +
T Consensus 15 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~ 94 (285)
T 1qtw_A 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDE 94 (285)
T ss_dssp HHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHH
Confidence 34566677889999999543322 23567778888888888742 21 1 1111 2221 1
Q ss_pred H-HHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CC-CCCchhHHHhh
Q 005248 176 L-RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NH-GSLSDRIMSYY 251 (706)
Q Consensus 176 l-~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~-GSL~~~il~ry 251 (706)
+ .|.+. +..|++.||..... + .+.+.++++.+.+.+++ ++++|+ +|++ |+ |.- ..+
T Consensus 95 i~~A~~lGa~~v~~~~g~~~~~--------~---~~~~~~~~~~~~l~~l~--a~~~gv--~l~lEn~~~~~-----~~~ 154 (285)
T 1qtw_A 95 MQRCEQLGLSLLNFHPGSHLMQ--------I---SEEDCLARIAESINIAL--DKTQGV--TAVIENTAGQG-----SNL 154 (285)
T ss_dssp HHHHHHTTCCEEEECCCBCTTT--------S---CHHHHHHHHHHHHHHHH--HHCSSC--EEEEECCCCCT-----TBC
T ss_pred HHHHHHcCCCEEEECcCCCCCC--------C---CHHHHHHHHHHHHHHHH--hccCCC--EEEEecCCCCC-----Ccc
Confidence 2 23333 78899999976431 1 13345566777777775 455665 5565 33 210 112
Q ss_pred CCChHHHHHHHHHHHHHHHHC-CCCcEEEEEec
Q 005248 252 GDSPRGMVESAFEFARICRKL-DFHNFLFSMKA 283 (706)
Q Consensus 252 gdt~eamVeSAle~~~i~e~~-~f~~iviS~Ka 283 (706)
+.|+ -+..+++++. +-.++-+-+=.
T Consensus 155 ~~~~-------~~~~~l~~~v~~~~~~g~~~D~ 180 (285)
T 1qtw_A 155 GFKF-------EHLAAIIDGVEDKSRVGVCIDT 180 (285)
T ss_dssp CSSH-------HHHHHHHHHCSCGGGEEEEEEH
T ss_pred cCCH-------HHHHHHHHhhcCccceEEEEEh
Confidence 3344 3445677777 66677666533
No 217
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=75.32 E-value=12 Score=39.35 Aligned_cols=87 Identities=11% Similarity=0.187 Sum_probs=58.3
Q ss_pred cCCCCceEEEeccC--C-CCCCHHHHHHHHHHHHHcCCCEEEEecC-------------------C-HHHHHHHHHHHHh
Q 005248 98 IGSEHPIRVQTMTT--N-DTKDVAGTVEEVMRIADQGADLVRITVQ-------------------G-KREADACFEIKNS 154 (706)
Q Consensus 98 IGG~~PI~VQSMt~--t-~T~Dv~atv~Qi~~L~~aGceiVRvtv~-------------------~-~~~A~al~~I~~~ 154 (706)
+||...=.|..+++ + ...|.+..++++.++.++|.+.|.+-+- + ..+.+.++.||+.
T Consensus 116 LGg~~~~~v~~y~~g~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a 195 (392)
T 2poz_A 116 FGGKIRDRVRAYANGWYGAADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDA 195 (392)
T ss_dssp TTCCSCSEEEEEECSCCTTCCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCccCceEEEEeccccCCCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHh
Confidence 45542224444442 2 2457899999999999999999998764 1 3355667777764
Q ss_pred hccCCcCcceeeccC--CCHHHHHHHhhhcCceee
Q 005248 155 LVQKNYNIPLVADIH--FAPSVALRVAECFDKIRV 187 (706)
Q Consensus 155 L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiRI 187 (706)
-|-++||..|.| |++.-|+..++.+++..|
T Consensus 196 ---~G~d~~l~vD~n~~~~~~~a~~~~~~l~~~~i 227 (392)
T 2poz_A 196 ---AGPEIELMVDLSGGLTTDETIRFCRKIGELDI 227 (392)
T ss_dssp ---HCTTSEEEEECTTCSCHHHHHHHHHHHGGGCE
T ss_pred ---cCCCCEEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 366899999998 555556555566666543
No 218
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=75.24 E-value=3.9 Score=43.36 Aligned_cols=106 Identities=13% Similarity=0.218 Sum_probs=77.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (706)
+|.+.+++|=- | ..-+.+.+++-+++|++.|.+.+===++. ++-+.+.+++++ +++|+.+|=. +++.-+.
T Consensus 216 ~G~~~~l~vDa--N-~~~~~~~A~~~~~~l~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 286 (390)
T 3ugv_A 216 VGRDTALMVDF--N-QGLDMAEAMHRTRQIDDLGLEWIEEPVVY-DNFDGYAQLRHD-----LKTPLMIGENFYGPREMH 286 (390)
T ss_dssp HCTTSEEEEEC--T-TCCCHHHHHHHHHHHTTSCCSEEECCSCT-TCHHHHHHHHHH-----CSSCEEECTTCCSHHHHH
T ss_pred hCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhhCCCEEECCCCc-ccHHHHHHHHHh-----cCCCEEeCCCcCCHHHHH
Confidence 57777888742 2 22356777788888888888877543442 245677788875 7899999955 4566666
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
.+++ +++-|.|.|+..|.-. ...++...|+++|+++
T Consensus 287 ~~i~~~a~d~v~ik~~~~GGit----------------------~~~~i~~~A~~~gi~~ 324 (390)
T 3ugv_A 287 QALQAGACDLVMPDFMRIGGVS----------------------GWMRAAGVAGAWGIPM 324 (390)
T ss_dssp HHHHTTCCSEECCBHHHHTHHH----------------------HHHHHHHHHHHHTCCB
T ss_pred HHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCEE
Confidence 6665 4999999999998733 5678999999999987
No 219
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=75.23 E-value=46 Score=33.10 Aligned_cols=174 Identities=11% Similarity=0.141 Sum_probs=98.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHH--HHHHHHHHHHhhccCCcCcceeeccC-------C--CHHHHHHHhhhcCc
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKR--EADACFEIKNSLVQKNYNIPLVADIH-------F--APSVALRVAECFDK 184 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~--~A~al~~I~~~L~~~g~~iPLVADIH-------F--~~~~Al~a~~~~~k 184 (706)
+.+..++|+.++.+.|||+|=+-+.-.+ +.+.+.+..+.|++.--++|++.-+- | +...-++..+.+
T Consensus 15 ~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~-- 92 (238)
T 1sfl_A 15 SIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDL-- 92 (238)
T ss_dssp ---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHHHG--
T ss_pred CHHHHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHHHH--
Confidence 4566678888889999999977764322 24445554455554333689997541 2 222222222211
Q ss_pred eee-CCCCCCcchhhccccccchHHHHHHHhh--HHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHH
Q 005248 185 IRV-NPGNFADRRAQFEQLEYTDDEYQKELQH--IEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261 (706)
Q Consensus 185 iRI-NPGNig~~~k~F~~~~YtdeeY~~El~~--I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeS 261 (706)
+|. +| .|.| .|++ . -++.+..+++.++++|+.| |+-+|= |..||. .+.
T Consensus 93 ~~~~~~-d~iD-------vEl~---------~~~~~~~~~~l~~~~~~~~~kv-I~S~Hd---------f~~tp~--~~e 143 (238)
T 1sfl_A 93 ANINGI-DMID-------IEWQ---------ADIDIEKHQRIITHLQQYNKEV-IISHHN---------FESTPP--LDE 143 (238)
T ss_dssp GGCTTC-CEEE-------EECC---------TTSCHHHHHHHHHHHHHTTCEE-EEEEEE---------SSCCCC--HHH
T ss_pred HHhCCC-CEEE-------EEcc---------CCCChHHHHHHHHHHHhcCCEE-EEEecC---------CCCCcC--HHH
Confidence 121 11 1222 2211 1 1345667899999988876 666661 223553 455
Q ss_pred HHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCcccccccccCCCCCCchhh
Q 005248 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKS 326 (706)
Q Consensus 262 Ale~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~g~~G~IKS 326 (706)
.++.++-++++|-+=++|-..+.+..+.....+...+. +.+.+.|+= ==.||+.|++--
T Consensus 144 l~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~~--~~~~~~P~I----~~~MG~~G~~SR 202 (238)
T 1sfl_A 144 LQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTF--SDTMDCKVV----GISMSKLGLISR 202 (238)
T ss_dssp HHHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHHHHH--HHHCSSEEE----EEECTGGGHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHH--hhcCCCCEE----EEECCCCchHHH
Confidence 56677888899999999999999988776655554332 122456641 135788887643
No 220
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=74.96 E-value=10 Score=39.73 Aligned_cols=85 Identities=13% Similarity=0.156 Sum_probs=56.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccC--CCHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPS 173 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~ 173 (706)
+||..+=.|....+..-.|.+..++++.++.++|.+.|.+-+-. ..+.+.+..||+. -| ++||..|.| |+..
T Consensus 129 lGg~~~~~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a---~g-d~~l~vD~n~~~~~~ 204 (384)
T 2pgw_A 129 LGGAHRKAVGYFYFLQGETAEELARDAAVGHAQGERVFYLKVGRGEKLDLEITAAVRGE---IG-DARLRLDANEGWSVH 204 (384)
T ss_dssp TTCCSSSEEEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHTT---ST-TCEEEEECTTCCCHH
T ss_pred cCCCCCCceEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCCCHHHHHHHHHHHHHH---cC-CcEEEEecCCCCCHH
Confidence 45532223333322233578889999999999999999998752 4456777777774 35 899999987 4555
Q ss_pred HHHHHhhhcCcee
Q 005248 174 VALRVAECFDKIR 186 (706)
Q Consensus 174 ~Al~a~~~~~kiR 186 (706)
-|++.++.+++..
T Consensus 205 ~a~~~~~~l~~~~ 217 (384)
T 2pgw_A 205 DAINMCRKLEKYD 217 (384)
T ss_dssp HHHHHHHHHGGGC
T ss_pred HHHHHHHHHHhcC
Confidence 5555555566543
No 221
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=74.87 E-value=51 Score=34.43 Aligned_cols=159 Identities=14% Similarity=0.189 Sum_probs=100.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCC-cCcceeeccC--CCHHHHHHHhhhcCceeeC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKN-YNIPLVADIH--FAPSVALRVAECFDKIRVN 188 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g-~~iPLVADIH--F~~~~Al~a~~~~~kiRIN 188 (706)
.|.+..++++.++.+.|..-+.+-+-+ .++.+.+..+++. .| -+++|..|.| |+..-|+..++.++++.|
T Consensus 161 ~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avr~~---~g~~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i- 236 (377)
T 2pge_A 161 GEAAFMQEQIEAKLAEGYGCLKLKIGAIDFDKECALLAGIRES---FSPQQLEIRVDANGAFSPANAPQRLKRLSQFHL- 236 (377)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEC---CHHHHHHHHHHHHHH---SCTTTCEEEEECTTBBCTTTHHHHHHHHHTTCC-
T ss_pred CCHHHHHHHHHHHHHHhhhhheeecCCCChHHHHHHHHHHHHH---cCCCCceEEEECCCCCCHHHHHHHHHHHhcCCC-
Confidence 357888999999999999999988753 5566777777775 36 5699999987 445555555555665432
Q ss_pred CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCch----hHHHhhC-C----Ch--HH
Q 005248 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD----RIMSYYG-D----SP--RG 257 (706)
Q Consensus 189 PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~----~il~ryg-d----t~--ea 257 (706)
-. +|+-.- .+.+..+.+.+++.++||=.|=+.-++.+ ++++.-. | .+ -|
T Consensus 237 ----~~----iEqP~~------------~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~G 296 (377)
T 2pge_A 237 ----HS----IEQPIR------------QHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLG 296 (377)
T ss_dssp ----SE----EECCBC------------SSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHT
T ss_pred ----cE----EEccCC------------cccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcC
Confidence 11 111110 01233455556667888877777666666 4444332 2 12 23
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHh
Q 005248 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 258 mVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~ 299 (706)
=+..+++.+++|++.|+. +++|.= ....+...|.-.|+..
T Consensus 297 Git~~~~i~~~A~~~g~~-~~~~~~-~es~i~~~a~~hlaa~ 336 (377)
T 2pge_A 297 GFHYAGQWIELARERGIG-FWITSA-LESNLGLAAIAQWTAL 336 (377)
T ss_dssp SHHHHHHHHHHHHHTTCE-EEEBCC-SCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCe-EEecCC-cccHHHHHHHHHHHHC
Confidence 367789999999999985 455542 2445566666666665
No 222
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=74.87 E-value=51 Score=35.07 Aligned_cols=156 Identities=10% Similarity=0.086 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccCCCHH---HHHHHhhh--cCceee
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHFAPS---VALRVAEC--FDKIRV 187 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~---~Al~a~~~--~~kiRI 187 (706)
..++.-++=+..|.++|.+.+=+..| ++.+.+.+..|++.+. +..+.+=.--+.+ .|++|+.. ++.|+|
T Consensus 31 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~----~~~i~~l~r~~~~di~~a~~al~~ag~~~v~i 106 (370)
T 3rmj_A 31 MTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTIT----KSTVCSLSRAIERDIRQAGEAVAPAPKKRIHT 106 (370)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCS----SSEEEEEEESSHHHHHHHHHHHTTSSSEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCC----CCeEEEEecCCHHHHHHHHHHHhhCCCCEEEE
Confidence 45677888888999999999999877 4678899999987532 2233222212333 34444332 444543
Q ss_pred -CCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHH
Q 005248 188 -NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFA 266 (706)
Q Consensus 188 -NPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~ 266 (706)
.|-+=...++.| ....+..-+.+.+.|+.||++|..+.++.-.++- .+| +-+++.+
T Consensus 107 f~~~Sd~h~~~~l----------~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r---------~~~----~~~~~~~ 163 (370)
T 3rmj_A 107 FIATSPIHMEYKL----------KMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALR---------SEI----DFLAEIC 163 (370)
T ss_dssp EEECSHHHHHHTT----------CCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGG---------SCH----HHHHHHH
T ss_pred EecCcHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCc---------cCH----HHHHHHH
Confidence 111111101111 1123445567778999999999988776432111 233 4566777
Q ss_pred HHHHHCCCCcEEEEEecCC----hhHHHHHHHHHHHh
Q 005248 267 RICRKLDFHNFLFSMKASN----PVVMVQAYRLLVAE 299 (706)
Q Consensus 267 ~i~e~~~f~~iviS~KaSn----v~~~i~ayrlla~~ 299 (706)
+.+++.|-+ .|+++-+. |..+-+-.+.|.++
T Consensus 164 ~~~~~~Ga~--~i~l~DT~G~~~P~~~~~lv~~l~~~ 198 (370)
T 3rmj_A 164 GAVIEAGAT--TINIPDTVGYSIPYKTEEFFRELIAK 198 (370)
T ss_dssp HHHHHHTCC--EEEEECSSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCC--EEEecCccCCcCHHHHHHHHHHHHHh
Confidence 888888987 57777665 54444444444444
No 223
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=74.77 E-value=3.5 Score=42.80 Aligned_cols=96 Identities=11% Similarity=0.144 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHHHHhh--hcCceeeCCCCCC
Q 005248 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAE--CFDKIRVNPGNFA 193 (706)
Q Consensus 117 v~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al~a~~--~~~kiRINPGNig 193 (706)
.+. ++-+++|.+.|.+.+===++ ..+.+.+..++++ +++|+++|=. +++.-+..+++ +++-|.|.|..+|
T Consensus 195 ~~~-~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G 267 (369)
T 2zc8_A 195 LAN-LAQLKRLDELRLDYIEQPLA-YDDLLDHAKLQRE-----LSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLG 267 (369)
T ss_dssp GGG-HHHHHGGGGGCCSCEECCSC-TTCSHHHHHHHHH-----CSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHT
T ss_pred HHH-HHHHHHHHhCCCcEEECCCC-cccHHHHHHHHhh-----CCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhC
Confidence 344 55566677777766543232 2445667777775 7899999965 45666667665 4999999999998
Q ss_pred cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC
Q 005248 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 194 ~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
.-. ...++++.|+++|+++=+|-+++
T Consensus 268 Git----------------------~~~~i~~~A~~~g~~~~~~~~~e 293 (369)
T 2zc8_A 268 GHG----------------------ESLRVHALAESAGIPLWMGGMLE 293 (369)
T ss_dssp SHH----------------------HHHHHHHHHHHTTCCEEECCCCC
T ss_pred CHH----------------------HHHHHHHHHHHcCCcEEecCccc
Confidence 733 45779999999999975555443
No 224
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=74.68 E-value=4.4 Score=43.09 Aligned_cols=97 Identities=14% Similarity=0.046 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHh--hhcCceeeCCCCCCcc
Q 005248 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA--ECFDKIRVNPGNFADR 195 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~--~~~~kiRINPGNig~~ 195 (706)
+.+++-+++|++.|-+.+===++ ++.+.+..+++++++.+.++|+.+|=++...-....+ .++|-|++.|.. |.-
T Consensus 215 ~~A~~~~~~L~~~~l~~iEeP~~--~d~~~~~~l~~~~~~~~~~ipIa~gE~~~~~~~~~li~~~a~dii~~d~~~-GGi 291 (392)
T 3v5c_A 215 NLTKEVLAALSDVNLYWLEAAFH--EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRVDVLQYDIIW-PGF 291 (392)
T ss_dssp HHHHHHHHHTTTSCCCEEECSSS--CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSCCEECCBTTT-BCH
T ss_pred HHHHHHHHhcccCCCeEEeCCCC--cCHHHHHHHHHhhccCCCCCcEECCCcccHHHHHHHHHcCCCcEEEeCCCC-CCH
Confidence 33333444444444333322233 2355677777766555688999998555433233444 359999999987 642
Q ss_pred hhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 196 ~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
. ....+...|+++|+++=++.+
T Consensus 292 t----------------------ea~kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 292 T----------------------HWMELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp H----------------------HHHHHHHHHHHTTCEECCBCC
T ss_pred H----------------------HHHHHHHHHHHcCCeEEecCC
Confidence 2 567899999999999976654
No 225
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=74.51 E-value=7.4 Score=44.03 Aligned_cols=95 Identities=18% Similarity=0.229 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC---CHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCcee--eCCCC
Q 005248 118 AGTVEEVMRIADQGADLVRITVQ---GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIR--VNPGN 191 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~---~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiR--INPGN 191 (706)
+.+.+.+..|.+||+|++=|-+- +..-.+.++.||+. --++|+||=-=-++..|..-+++ +|.|+ |-||-
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~----~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGS 355 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQT----YPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGS 355 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHH----CTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCST
T ss_pred ccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhh----CCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCc
Confidence 35678899999999999877643 45667778888875 33699999877888888887786 88777 78887
Q ss_pred CCc-------chhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 192 FAD-------RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 192 ig~-------~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
+-- +.-++ ..+.++.++|+++|+||
T Consensus 356 iCtTr~v~GvG~PQ~------------------tAi~~~a~~a~~~~vpv 387 (556)
T 4af0_A 356 ICITQEVMAVGRPQG------------------TAVYAVAEFASRFGIPC 387 (556)
T ss_dssp TBCCTTTCCSCCCHH------------------HHHHHHHHHHGGGTCCE
T ss_pred ccccccccCCCCcHH------------------HHHHHHHHHHHHcCCCE
Confidence 622 11111 14555677888999997
No 226
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=74.47 E-value=11 Score=39.53 Aligned_cols=70 Identities=9% Similarity=0.103 Sum_probs=52.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC-C--HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCcee
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQ-G--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~-~--~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiR 186 (706)
..|.+..++++.++.++|.+.|.|-+- + ..+.+.++.||+.+ |-++||..|.| |+..-|++.++.+++..
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~---G~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 221 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIV---GDELPLMLDLAVPEDLDQTKSFLKEVSSFN 221 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHH---CSSSCEEEECCCCSCHHHHHHHHHHHGGGC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHh---CCCCEEEEEcCCCCCHHHHHHHHHHHHhcC
Confidence 357899999999999999999998742 2 55677788888753 56899999988 55666666666566543
No 227
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=74.39 E-value=4 Score=39.64 Aligned_cols=154 Identities=12% Similarity=0.124 Sum_probs=81.7
Q ss_pred HHHHHHHHHHcCCCEEEEecCCH---H---HHHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHhhh-cCceeeCCCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGK---R---EADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~---~---~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~~~-~~kiRINPGN 191 (706)
.++.++++.++|++.+=+...+. . ..+.+++|++ .+++|+++.--++ +.-+..+++. +|+|=|.-..
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~-----~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~ 106 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAE-----QIDIPFTVGGGIHDFETASELILRGADKVSINTAA 106 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHT-----TCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHH-----hCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 45566888999999987775542 2 2344455554 4789999864443 6667777775 8887443222
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC-eEEEecCCCCCchh-HHHhhCCChHHHHHHHHHHHHHH
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR-AVRIGTNHGSLSDR-IMSYYGDSPRGMVESAFEFARIC 269 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~-~IRIGvN~GSL~~~-il~rygdt~eamVeSAle~~~i~ 269 (706)
+.++ ..+.+.++.+|. .+.+|++..+.+.. ...-+|-. +..-.+.+|+++.+
T Consensus 107 l~~p-------------------------~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~-~~~~~~~~e~~~~~ 160 (253)
T 1thf_D 107 VENP-------------------------SLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGK-KNTGILLRDWVVEV 160 (253)
T ss_dssp HHCT-------------------------HHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTT-EEEEEEHHHHHHHH
T ss_pred HhCh-------------------------HHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCc-cccCCCHHHHHHHH
Confidence 2111 123344445553 46677764210000 00111210 00011346778888
Q ss_pred HHCCCCcEEEEE-ecCCh--hHHHHHHHHHHHhhhcCCCCCcc
Q 005248 270 RKLDFHNFLFSM-KASNP--VVMVQAYRLLVAEMYVHGWDYPL 309 (706)
Q Consensus 270 e~~~f~~iviS~-KaSnv--~~~i~ayrlla~~~~~eg~~YPL 309 (706)
++.|++-|.+.- +.... ..-.+.++.+.+. .+.|+
T Consensus 161 ~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~-----~~ipv 198 (253)
T 1thf_D 161 EKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-----TTLPI 198 (253)
T ss_dssp HHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGG-----CCSCE
T ss_pred HHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHh-----cCCCE
Confidence 889999988852 21110 0114555555554 46665
No 228
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=74.25 E-value=11 Score=40.86 Aligned_cols=92 Identities=13% Similarity=0.103 Sum_probs=71.5
Q ss_pred HHHHHcCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhh--hcCceeeCCCCCCcchhhc
Q 005248 125 MRIADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAE--CFDKIRVNPGNFADRRAQF 199 (706)
Q Consensus 125 ~~L~~aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~--~~~kiRINPGNig~~~k~F 199 (706)
..|.+.+ |+=|-=| ..++-+.++.+++++ |.++||++|=. +|+.-....++ +++-|.|.|..+|.-.
T Consensus 283 ~~l~~y~--i~~iEdPl~~~D~~g~~~l~~~~---g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik~~~~GGit--- 354 (432)
T 2ptz_A 283 KWAHDYP--IVSIEDPYDQDDFAGFAGITEAL---KGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKINQIGTIS--- 354 (432)
T ss_dssp HHHHHSC--EEEEECCSCTTCHHHHHHHHHHT---TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHH---
T ss_pred HHHHhCC--ceEEECCCCcchHHHHHHHHHhc---CCCCeEEecCcccCCHHHHHHHHHcCCCCEEEecccccCCHH---
Confidence 4556664 7777766 446788899999863 34799999976 78888777776 4999999999998833
Q ss_pred cccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCC
Q 005248 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (706)
Q Consensus 200 ~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL 243 (706)
...++++.|+++|+++=+|-.+|.-
T Consensus 355 -------------------ea~~i~~lA~~~g~~v~~~h~~get 379 (432)
T 2ptz_A 355 -------------------EAIASSKLCMENGWSVMVSHRSGET 379 (432)
T ss_dssp -------------------HHHHHHHHHHHTTCEEEEECCSBCC
T ss_pred -------------------HHHHHHHHHHHcCCeEEecCCCCcc
Confidence 4567999999999999888776654
No 229
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=74.02 E-value=14 Score=35.64 Aligned_cols=97 Identities=11% Similarity=0.093 Sum_probs=59.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCHH-------HHHHHHHHHHhhccCCc-Ccceeec--cCC--CHH----------HHH-H
Q 005248 121 VEEVMRIADQGADLVRITVQGKR-------EADACFEIKNSLVQKNY-NIPLVAD--IHF--APS----------VAL-R 177 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~~-------~A~al~~I~~~L~~~g~-~iPLVAD--IHF--~~~----------~Al-~ 177 (706)
.+.+..++++|++-|-+-..+.. ..+.+.++++.+.+.|+ .+-+-+. +.+ ++. .++ .
T Consensus 17 ~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~i~~ 96 (270)
T 3aam_A 17 AGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVASLADDLEK 96 (270)
T ss_dssp HHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 34456667789999988653321 13456677777777777 4433332 111 221 122 2
Q ss_pred Hhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHH-HcCCeEEE
Q 005248 178 VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK-KYGRAVRI 236 (706)
Q Consensus 178 a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ak-e~~~~IRI 236 (706)
|.+. +..|.+.||.. + . +++.+.+.++.+.|+ ++|+.+-|
T Consensus 97 a~~lGa~~vv~h~g~~-~-~-----------------~~~~~~l~~l~~~a~~~~gv~l~l 138 (270)
T 3aam_A 97 AALLGVEYVVVHPGSG-R-P-----------------ERVKEGALKALRLAGVRSRPVLLV 138 (270)
T ss_dssp HHHHTCCEEEECCCBS-C-H-----------------HHHHHHHHHHHHHHTCCSSSEEEE
T ss_pred HHHcCCCEEEECCCCC-C-H-----------------HHHHHHHHHHHHhhcccCCCEEEE
Confidence 3333 78899999976 1 0 566778888999998 88875544
No 230
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=73.92 E-value=8.5 Score=36.24 Aligned_cols=96 Identities=14% Similarity=0.101 Sum_probs=65.4
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCc-CcceeeccCC-C-HHH-HHHHhhh-cC
Q 005248 111 TNDTKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNY-NIPLVADIHF-A-PSV-ALRVAEC-FD 183 (706)
Q Consensus 111 ~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~-~iPLVADIHF-~-~~~-Al~a~~~-~~ 183 (706)
.-|..|.+.+++-++++.+ |++++=|..+- ..-.+.++.|++. + +.|+++|.-+ | +.. +..|+++ +|
T Consensus 6 a~d~~~~~~~~~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~~-----~~~~~i~~~l~~~di~~~~~~~a~~~Gad 79 (207)
T 3ajx_A 6 AIDLLSTEAALELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKKA-----HPDKIVFADMKTMDAGELEADIAFKAGAD 79 (207)
T ss_dssp EECCSCHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHH-----STTSEEEEEEEECSCHHHHHHHHHHTTCS
T ss_pred EeCCCCHHHHHHHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHHh-----CCCCeEEEEEEecCccHHHHHHHHhCCCC
Confidence 3466788999999999988 99998887653 1223345555553 4 6899987542 4 444 6777776 88
Q ss_pred ceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 184 kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
-|=+.|+.- + +.+.++++.|+++|..+ |+
T Consensus 80 ~v~vh~~~~-~-----------------------~~~~~~~~~~~~~g~~~--gv 108 (207)
T 3ajx_A 80 LVTVLGSAD-D-----------------------STIAGAVKAAQAHNKGV--VV 108 (207)
T ss_dssp EEEEETTSC-H-----------------------HHHHHHHHHHHHHTCEE--EE
T ss_pred EEEEeccCC-h-----------------------HHHHHHHHHHHHcCCce--EE
Confidence 887666532 1 13456888999999884 77
No 231
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=73.82 E-value=6.8 Score=40.76 Aligned_cols=68 Identities=12% Similarity=0.167 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhc-Cce
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECF-DKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~-~ki 185 (706)
.|.+..++++.++.++|.+.+.+-+-. ..+.+.++.||+. -|-++||..|.| |+..-|++.++.+ ++.
T Consensus 145 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a---~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~ 217 (371)
T 2ps2_A 145 GEPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALAN---QQPDEFFIVDANGKLSVETALRLLRLLPHGL 217 (371)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEECCSCHHHHHHHHHHHTTT---CCTTCEEEEECTTBCCHHHHHHHHHHSCTTC
T ss_pred CCHHHHHHHHHHHHHhChheEEeecCCCHHHHHHHHHHHHHh---cCCCCEEEEECCCCcCHHHHHHHHHHHHhhc
Confidence 478999999999999999999998743 3445556666553 366899999988 5566666666666 765
No 232
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=73.71 E-value=27 Score=33.82 Aligned_cols=108 Identities=13% Similarity=0.128 Sum_probs=71.6
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC----CHH--------------------HHHHHHHHHHhhccC
Q 005248 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ----GKR--------------------EADACFEIKNSLVQK 158 (706)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~----~~~--------------------~A~al~~I~~~L~~~ 158 (706)
+..+=|++..|. |.+.++++++++.++ ++.+=+.+| .++ -.+.+++|++ .
T Consensus 5 ~~~~~~i~~~~~-~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~----~ 78 (248)
T 1geq_A 5 GSLIPYLTAGDP-DKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRR----H 78 (248)
T ss_dssp TEEEEEEETTSS-CHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHT----T
T ss_pred ccEEEEEeCCCC-CHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHh----h
Confidence 445667777765 568899999999999 999999966 221 1233344443 3
Q ss_pred CcCcceeeccCCCH-------HHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHc
Q 005248 159 NYNIPLVADIHFAP-------SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY 230 (706)
Q Consensus 159 g~~iPLVADIHF~~-------~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~ 230 (706)
+++|++.=.-+|+ +.+..|+++ ++-|.+. +.... ....+++.|+++
T Consensus 79 -~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~~~-----------------------~~~~~~~~~~~~ 132 (248)
T 1geq_A 79 -SSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVV--DLPVF-----------------------HAKEFTEIAREE 132 (248)
T ss_dssp -CCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TCCGG-----------------------GHHHHHHHHHHH
T ss_pred -CCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEEC--CCChh-----------------------hHHHHHHHHHHh
Confidence 5677554333354 556667776 9999993 33221 245689999999
Q ss_pred CCeEEEecCCCC
Q 005248 231 GRAVRIGTNHGS 242 (706)
Q Consensus 231 ~~~IRIGvN~GS 242 (706)
|..+=+++|..+
T Consensus 133 g~~~~~~i~~~t 144 (248)
T 1geq_A 133 GIKTVFLAAPNT 144 (248)
T ss_dssp TCEEEEEECTTC
T ss_pred CCCeEEEECCCC
Confidence 998888886543
No 233
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=73.57 E-value=10 Score=40.17 Aligned_cols=68 Identities=13% Similarity=0.324 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC---C----------------HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHH
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQ---G----------------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSV 174 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~---~----------------~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~ 174 (706)
+.+..++++.++.++|.+-|.+-+- + ..+.+.+..||+.+ |-+++|..|.| |+..-
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~---G~d~~l~vDan~~~~~~~ 225 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAV---GPEVEVAIDMHGRFDIPS 225 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHH---CSSSEEEEECTTCCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhc---CCCCEEEEECCCCCCHHH
Confidence 6788999999999999999999872 2 23566777777753 67899999998 45555
Q ss_pred HHHHhhhcCcee
Q 005248 175 ALRVAECFDKIR 186 (706)
Q Consensus 175 Al~a~~~~~kiR 186 (706)
|+..++.++++.
T Consensus 226 a~~~~~~l~~~~ 237 (410)
T 2qq6_A 226 SIRFARAMEPFG 237 (410)
T ss_dssp HHHHHHHHGGGC
T ss_pred HHHHHHHHhhcC
Confidence 555555566543
No 234
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=73.54 E-value=5.9 Score=42.09 Aligned_cols=62 Identities=11% Similarity=0.096 Sum_probs=48.5
Q ss_pred CcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 159 NYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 159 g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
.+++||.+|=.+ +..-+..+++ +++-|.|.|...|.-. ...++...|+++|+++=
T Consensus 256 ~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit----------------------~~~~ia~~A~~~gi~~~ 313 (391)
T 4e8g_A 256 RVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQ----------------------QMAAFRDICEARALPHS 313 (391)
T ss_dssp GCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHH----------------------HHHHHHHHHHHTTCCEE
T ss_pred hCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHH----------------------HHHHHHHHHHHcCCeEE
Confidence 478999999654 4555555554 4999999999998733 56779999999999999
Q ss_pred EecCCCC
Q 005248 236 IGTNHGS 242 (706)
Q Consensus 236 IGvN~GS 242 (706)
+|-+++|
T Consensus 314 ~~~~~es 320 (391)
T 4e8g_A 314 CDDAWGG 320 (391)
T ss_dssp EECSSCS
T ss_pred eCCcCCC
Confidence 9877654
No 235
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=73.43 E-value=11 Score=36.16 Aligned_cols=108 Identities=12% Similarity=0.132 Sum_probs=64.6
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEec------CCHHH-HHHHHHHHHhhccCCcCcceeeccCCCH--HHH
Q 005248 105 RVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV------QGKRE-ADACFEIKNSLVQKNYNIPLVADIHFAP--SVA 175 (706)
Q Consensus 105 ~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv------~~~~~-A~al~~I~~~L~~~g~~iPLVADIHF~~--~~A 175 (706)
.+-|++..|. ....+++..+.++|++++-+.+ |+... .+.+++|++. ++.|+..+.=+|. +.+
T Consensus 13 i~p~i~a~d~---~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~-----~~~~~~v~l~vnd~~~~v 84 (230)
T 1rpx_A 13 VSPSILSANF---SKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI-----TDLPLDVHLMIVEPDQRV 84 (230)
T ss_dssp EEEBGGGSCG---GGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGG-----CCSCEEEEEESSSHHHHH
T ss_pred EEEEeecCCH---HHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhc-----cCCcEEEEEEecCHHHHH
Confidence 5667777664 4556778888999999998863 54321 2444445543 4678887766664 345
Q ss_pred HHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCC
Q 005248 176 LRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (706)
Q Consensus 176 l~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL 243 (706)
..|+++ ++-|= =++..+... ...++++.++++|+.+=+-+|-++-
T Consensus 85 ~~~~~~Gad~v~-vh~~~~~~~----------------------~~~~~~~~~~~~g~~ig~~~~p~t~ 130 (230)
T 1rpx_A 85 PDFIKAGADIVS-VHCEQSSTI----------------------HLHRTINQIKSLGAKAGVVLNPGTP 130 (230)
T ss_dssp HHHHHTTCSEEE-EECSTTTCS----------------------CHHHHHHHHHHTTSEEEEEECTTCC
T ss_pred HHHHHcCCCEEE-EEecCccch----------------------hHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 556665 77663 233310101 2346788888888765444554443
No 236
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=73.32 E-value=7.2 Score=41.76 Aligned_cols=70 Identities=21% Similarity=0.319 Sum_probs=52.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC-----------------------------------HHHHHHHHHHHHhhccC
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQG-----------------------------------KREADACFEIKNSLVQK 158 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~-----------------------------------~~~A~al~~I~~~L~~~ 158 (706)
..|.+..++++++..+.|...+.+-+-. .++.+.++.||+.+
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~--- 217 (418)
T 3r4e_A 141 GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTY--- 217 (418)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHc---
Confidence 4578999999999999999999986531 24566677777753
Q ss_pred CcCcceeeccC--CCHHHHHHHhhhcCcee
Q 005248 159 NYNIPLVADIH--FAPSVALRVAECFDKIR 186 (706)
Q Consensus 159 g~~iPLVADIH--F~~~~Al~a~~~~~kiR 186 (706)
|-++||..|.| |+..-|+..++.+++..
T Consensus 218 G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~ 247 (418)
T 3r4e_A 218 GFDHHLLHDGHHRYTPQEAANLGKMLEPYQ 247 (418)
T ss_dssp CSSSEEEEECTTCSCHHHHHHHHHHHGGGC
T ss_pred CCCCeEEEeCCCCCCHHHHHHHHHHHHhhC
Confidence 56899999998 56666666666666643
No 237
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=73.20 E-value=8.7 Score=39.46 Aligned_cols=141 Identities=12% Similarity=0.157 Sum_probs=84.2
Q ss_pred HHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhc-----cCCc----------------------CcceeeccCCCHHHH
Q 005248 123 EVMRIADQGADLVRITVQGKREADACFEIKNSLV-----QKNY----------------------NIPLVADIHFAPSVA 175 (706)
Q Consensus 123 Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~-----~~g~----------------------~iPLVADIHF~~~~A 175 (706)
+|+++.++|++ .|-+|-.+.++.+..+.+.++ .+|+ ++++++=| -.+...
T Consensus 103 di~~~ld~ga~--~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mI-Et~~av 179 (287)
T 2v5j_A 103 QIKQLLDVGTQ--TLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQI-ETREAM 179 (287)
T ss_dssp HHHHHHHTTCC--EEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEE-CSHHHH
T ss_pred HHHHHHhCCCC--EEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEE-CcHHHH
Confidence 89999999999 566676666666666666543 2233 25555554 223322
Q ss_pred HHHhh------hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHH
Q 005248 176 LRVAE------CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249 (706)
Q Consensus 176 l~a~~------~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~ 249 (706)
. .++ .+|-+=|-|+.+.-.-. ..|+ .+-..+....+.++.+|+++|+++ |+..
T Consensus 180 ~-n~deIaa~~~vD~l~iG~~DLs~~lg----~~~~-----~~~p~v~~a~~~iv~aaraaG~~~--gv~~--------- 238 (287)
T 2v5j_A 180 K-NLPQILDVEGVDGVFIGPADLSADMG----YAGN-----PQHPEVQAAIEQAIVQIRESGKAP--GILI--------- 238 (287)
T ss_dssp H-THHHHHTSTTEEEEEECHHHHHHHTT----STTC-----CCSHHHHHHHHHHHHHHHHTTSEE--EEEC---------
T ss_pred H-HHHHHhCcCCCCEEEECHHHHHHHhC----CCCC-----CCCHHHHHHHHHHHHHHHHcCCee--EEec---------
Confidence 2 222 25556666654422110 0010 011223445567999999999997 6522
Q ss_pred hhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhh
Q 005248 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY 301 (706)
Q Consensus 250 rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~ 301 (706)
.+| +.++.+.++||+-+.++ +|+..+.++.+.+.+.+.
T Consensus 239 ---~d~--------~~a~~~~~~G~~~~s~~---~d~~~l~~~~~~~~~~~~ 276 (287)
T 2v5j_A 239 ---ANE--------QLAKRYLELGALFVAVG---VDTTLLARAAEALAARFG 276 (287)
T ss_dssp ---CCH--------HHHHHHHHTTCSEEEEE---EHHHHHHHHHHHHHHHHH
T ss_pred ---CCH--------HHHHHHHHhCCCEEEEC---cHHHHHHHHHHHHHHHhh
Confidence 233 36778889999977665 477778888887777643
No 238
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=73.05 E-value=9.8 Score=38.50 Aligned_cols=55 Identities=25% Similarity=0.420 Sum_probs=41.4
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEec--CCHHHHHHHHHHHHhhccCCcCcceee
Q 005248 112 NDTKDVAGTVEEVMRIADQGADLVRITV--QGKREADACFEIKNSLVQKNYNIPLVA 166 (706)
Q Consensus 112 t~T~Dv~atv~Qi~~L~~aGceiVRvtv--~~~~~A~al~~I~~~L~~~g~~iPLVA 166 (706)
..|-+.+.-.+.+.++.+.|||||.|++ ++.++.-.|-+...++++...+.|+|+
T Consensus 150 ~~TP~~~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~ 206 (258)
T 4h3d_A 150 NKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIIT 206 (258)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 3455667788889999999999999986 567777777666666655556778864
No 239
>1zj8_A Probable ferredoxin-dependent nitrite reductase N; NIRA, sulfite, siroheme, Fe4-S4, Cys-Tyr bond, structural proteomics in europe; HET: SRM; 2.80A {Mycobacterium tuberculosis} SCOP: d.58.36.1 d.58.36.1 d.134.1.1 d.134.1.1 PDB: 1zj9_A*
Probab=72.98 E-value=6.8 Score=43.77 Aligned_cols=54 Identities=22% Similarity=0.266 Sum_probs=41.6
Q ss_pred eEeccCCCCc---ccccHHHHHHHHHHHhCC------CC-CCeEEEEcccccCccccccCceeeecc
Q 005248 641 EYVSCPSCGR---TLFDLQEISAEIREKTSH------LP-GVSIAIMGCIVNGPGEMADADFGYVGG 697 (706)
Q Consensus 641 e~ISCPsCGR---TlfDLq~~~a~Ik~~t~h------Lk-glkIAIMGCIVNGPGEmadAD~GyvG~ 697 (706)
+.++||..|+ -++|...++.+|.+.+.. || -.||||=||. |.. ..-+|+|++|.
T Consensus 178 nv~~~p~~~~~~~~~~D~~~~~~~l~~~~~~~~~~~~LP~KfKiavsgc~-~~~--~~~~Dig~i~~ 241 (566)
T 1zj8_A 178 VVLGSPLAGESLDEVLDPTWAIEEIVRRYIGKPDFADLPRKYKTAISGLQ-DVA--HEINDVAFIGV 241 (566)
T ss_dssp EEEECTTTTTCTTCSCCTHHHHHHHHHHHTTSGGGSSCSSCEEEEEESSS-CSC--GGGSSEEEEEE
T ss_pred CeecCcccccCcccccCcHHHHHHHHHHHcCCcccccCCcceEEEEeccC-Ccc--cccCcEEEEEE
Confidence 6889998665 578888888888776643 77 6899999994 543 35689999885
No 240
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=72.88 E-value=30 Score=34.58 Aligned_cols=90 Identities=19% Similarity=0.289 Sum_probs=60.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCH---------HHH---------------HHHHHHHHhhccCCc-CcceeeccC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGK---------REA---------------DACFEIKNSLVQKNY-NIPLVADIH 169 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~---------~~A---------------~al~~I~~~L~~~g~-~iPLVADIH 169 (706)
-|.+.+++-++.|.++|+|++=+-+|-. ++| +.+++||+. + ++|++.=.-
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~-----~~~~Pi~~m~y 102 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKE-----FPDIPFLLMTY 102 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-----CTTSCEEEECC
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhh-----cCCCCEEEEec
Confidence 3668899999999999999999998652 222 335555553 6 799999445
Q ss_pred CCH-------HHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 170 FAP-------SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 170 F~~-------~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
+|+ +.+..|+++ ++.+=+ |. +. -+...++++.|+++|+.+
T Consensus 103 ~n~v~~~g~~~f~~~~~~aG~dgvii-~d-l~-----------------------~ee~~~~~~~~~~~gl~~ 150 (262)
T 2ekc_A 103 YNPIFRIGLEKFCRLSREKGIDGFIV-PD-LP-----------------------PEEAEELKAVMKKYVLSF 150 (262)
T ss_dssp HHHHHHHCHHHHHHHHHHTTCCEEEC-TT-CC-----------------------HHHHHHHHHHHHHTTCEE
T ss_pred CcHHHHhhHHHHHHHHHHcCCCEEEE-CC-CC-----------------------HHHHHHHHHHHHHcCCcE
Confidence 554 334456665 776655 31 10 024667889999999764
No 241
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=72.78 E-value=10 Score=40.44 Aligned_cols=68 Identities=12% Similarity=0.159 Sum_probs=51.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC------------HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHh
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQG------------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVA 179 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~------------~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~ 179 (706)
-.+.+..++++.++.+.|...+.+ +-. .++.+.++.||+. -|-++||..|.| |+..-|+..+
T Consensus 123 ~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~~~~~~~~~d~e~v~avR~a---vG~d~~L~vDaN~~~~~~~A~~~~ 198 (405)
T 3rr1_A 123 GDRPADVIAGMKALQAGGFDHFKL-NGCEEMGIIDTSRAVDAAVARVAEIRSA---FGNTVEFGLDFHGRVSAPMAKVLI 198 (405)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCBCSHHHHHHHHHHHHHHHHT---TGGGSEEEEECCSCBCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccccccchhHHHHHHHHHHHHHH---hCCCceEEEECCCCCCHHHHHHHH
Confidence 356799999999999999999999 533 2456677777764 356899999998 5566666666
Q ss_pred hhcCce
Q 005248 180 ECFDKI 185 (706)
Q Consensus 180 ~~~~ki 185 (706)
+.+++.
T Consensus 199 ~~L~~~ 204 (405)
T 3rr1_A 199 KELEPY 204 (405)
T ss_dssp HHHGGG
T ss_pred HHHHhc
Confidence 666665
No 242
>1xfc_A Alanine racemase; alpha-beta barrel, beta-structure for C-terminal domain, INT aldimine form, isomerase; HET: PLP; 1.90A {Mycobacterium tuberculosis}
Probab=72.64 E-value=11 Score=39.18 Aligned_cols=139 Identities=18% Similarity=0.209 Sum_probs=69.9
Q ss_pred HHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccc
Q 005248 126 RIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205 (706)
Q Consensus 126 ~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~Yt 205 (706)
.|.++|++ .+.|.+..||..+. +.|++-|++.=-|..+.-+..++++ .+.++ +-+
T Consensus 56 ~l~~~G~~--~~~vas~~Ea~~~~-------~~G~~~~Il~~g~~~~~~~~~~~~~--~i~~~---vds----------- 110 (384)
T 1xfc_A 56 TALGAGAA--ELGVATVDEALALR-------ADGITAPVLAWLHPPGIDFGPALLA--DVQVA---VSS----------- 110 (384)
T ss_dssp HHHHTTCC--EEEESCHHHHHHHH-------HTTCCSCEEECCCCTTCCCHHHHHT--TCEEE---ECS-----------
T ss_pred HHHHCCCC--EEEEeEHHHHHHHH-------hcCCCCCEEEEcCCCHHHHHHHHHc--CcEEE---ECC-----------
Confidence 35578874 57888888887654 2366655553122222222233321 12221 211
Q ss_pred hHHHHHHHhhHHhhHHHHHHHHHHcCC--eEEEecCCCCCchhHHHhhCCCh---HHHHHHHHHHHHHHHHCCCCcEEE-
Q 005248 206 DDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSP---RGMVESAFEFARICRKLDFHNFLF- 279 (706)
Q Consensus 206 deeY~~El~~I~~~f~~vv~~ake~~~--~IRIGvN~GSL~~~il~rygdt~---eamVeSAle~~~i~e~~~f~~ivi- 279 (706)
.+.++.+-+.|++.+. +|.|=||.| |+|+|-.+ +. +.+.++.+.++. ++.+
T Consensus 111 -----------~~~l~~l~~~a~~~~~~~~V~l~vdtG------~~R~G~~~~~~~~----~~~~~~~i~~~~--~l~l~ 167 (384)
T 1xfc_A 111 -----------LRQLDELLHAVRRTGRTATVTVKVDTG------LNRNGVGPAQFPA----MLTALRQAMAED--AVRLR 167 (384)
T ss_dssp -----------HHHHHHHHHHHHHHCCCEEEEEEBCSS------CCSSSBCTTTHHH----HHHHHHHHHHTT--SEEEE
T ss_pred -----------HHHHHHHHHHHHhcCCceEEEEEEECC------CCccCCCcCcHHH----HHHHHHHHHhCC--CCcEE
Confidence 1123334455666554 577788988 58899555 43 334445455432 1111
Q ss_pred -------EEecCC---hhHHHHHHHHHHHhhhcCCCCCc-cccc
Q 005248 280 -------SMKASN---PVVMVQAYRLLVAEMYVHGWDYP-LHLG 312 (706)
Q Consensus 280 -------S~KaSn---v~~~i~ayrlla~~~~~eg~~YP-LHLG 312 (706)
|--..+ ....++.++.+++++.+.|.+.+ +|+|
T Consensus 168 Gl~tH~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~g 211 (384)
T 1xfc_A 168 GLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLS 211 (384)
T ss_dssp EEECCC-----CCSHHHHHHHHHHHHHHHHHHHTTCCCSEEECB
T ss_pred EEEecCCCcCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCeEEEe
Confidence 111112 22345566667777777676655 6665
No 243
>2vd8_A Alanine racemase; pyridoxal 5'-phosphate, peptidoglycan synthesis, PLP, OPPF, L-alanine, isomerase, D- alanine, pyridoxal phosphate; HET: MLY LLP; 1.47A {Bacillus anthracis} PDB: 2vd9_A* 3ha1_A*
Probab=72.46 E-value=8.4 Score=40.42 Aligned_cols=139 Identities=14% Similarity=0.082 Sum_probs=74.1
Q ss_pred HHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccc
Q 005248 126 RIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205 (706)
Q Consensus 126 ~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~Yt 205 (706)
.|.++||+ .+.|.+.+||..+. +.|++-|++-=-|+.+.-+..++++ .+. + ++-+.
T Consensus 57 ~l~~~G~~--~f~vas~~Ea~~lr-------~~G~~~~il~~g~~~~~~~~~~~~~--~i~--~-~vds~---------- 112 (391)
T 2vd8_A 57 IALEAGAT--RLAVAFLDEALVLR-------RAGITAPILVLGPSPPRDINVAAEN--DVA--L-TVFQX---------- 112 (391)
T ss_dssp HHHHTTCC--EEEESSHHHHHHHH-------HTTCCSCEEECSCCCGGGHHHHHHT--TEE--E-ECCCH----------
T ss_pred HHHHcCCC--eEEeecHHHHHHHH-------hcCCCCceEEecCCChHHHHHHHHC--CeE--E-EEcCH----------
Confidence 36789985 57888988887653 3477766542134555444444442 233 3 44331
Q ss_pred hHHHHHHHhhHHhhHHHHHHHHHHcCC--eEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEE----
Q 005248 206 DDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF---- 279 (706)
Q Consensus 206 deeY~~El~~I~~~f~~vv~~ake~~~--~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~ivi---- 279 (706)
+.++.+-+ |++.+. +|.|=+|.| |+|+|-.++ +.+.+.++.+.++. ++.+
T Consensus 113 ------------~~l~~l~~-a~~~~~~~~V~lkvdtG------m~R~G~~~~---~e~~~~~~~i~~~~--~l~l~Gl~ 168 (391)
T 2vd8_A 113 ------------EWVDEAIX-LWDGSSTMXYHINFDSG------MGRIGIRER---XELXGFLXSLEGAP--FLELEGVY 168 (391)
T ss_dssp ------------HHHHHHHH-HCCSSCCEEEEEEBCSS------CCSSSBCCH---HHHHHHHHHHTTCT--TEEEEEEE
T ss_pred ------------HHHHHHHH-HHhcCCceEEEEEEeCC------CCCCCCCch---hhHHHHHHHHhhcC--CceEEEee
Confidence 13444555 666665 466778888 578995542 23445555555432 2222
Q ss_pred E-EecCC------hhHHHHHHHHHHHhhhcCCCCCc-cccc
Q 005248 280 S-MKASN------PVVMVQAYRLLVAEMYVHGWDYP-LHLG 312 (706)
Q Consensus 280 S-~KaSn------v~~~i~ayrlla~~~~~eg~~YP-LHLG 312 (706)
+ .=+++ ...-++.++.+++++.+.|.+.| +|+|
T Consensus 169 tH~~~~d~~~~~~~~~q~~~f~~~~~~l~~~g~~~~~~~~g 209 (391)
T 2vd8_A 169 THFATADEVETSYFDXQYNTFLEQLSWLXEFGVDPXFVHTA 209 (391)
T ss_dssp CCCSSTTSSSCHHHHHHHHHHHHHHHHHHHTTCCCCSEECC
T ss_pred eccccccCCCcHHHHHHHHHHHHHHHHHHhccCCcceEEec
Confidence 1 11111 22245566667777766665543 5654
No 244
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=72.42 E-value=6.5 Score=39.18 Aligned_cols=49 Identities=10% Similarity=0.163 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceee
Q 005248 118 AGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVA 166 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVA 166 (706)
+.-.+.+.++.+.|||||+|++. +.++.-.|-+...+....+.+.|+||
T Consensus 128 ~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~~~~~~~~~P~I~ 178 (231)
T 2ocz_A 128 ENLMEAFSEMTKLAPRVVKIAVMPQSEQDVLDLMNYTRGFKTLNPEQEFAT 178 (231)
T ss_dssp TTHHHHHHHHHHTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHHHHHHHhhccCCCCEEE
Confidence 55566677788899999999976 55777767666666544456789877
No 245
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=72.42 E-value=5.6 Score=41.27 Aligned_cols=103 Identities=15% Similarity=0.180 Sum_probs=69.3
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHhhhcCceeeC
Q 005248 110 TTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAECFDKIRVN 188 (706)
Q Consensus 110 t~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~~~~~kiRIN 188 (706)
.|..-.|.+..++-+++|.+.|.+.+===++ .++-+.+.+++++ +++||.+|=++. ..-+..++.+++-|.|.
T Consensus 180 aN~~~t~~~~A~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~~~a~d~i~~k 253 (338)
T 3ijl_A 180 ANQGWKDRQYALDMIHWLKEKGIVMIEQPMP-KEQLDDIAWVTQQ-----SPLPVFADESLQRLGDVAALKGAFTGINIK 253 (338)
T ss_dssp CTTCCCCHHHHHHHHHHHHHTTEEEEECCSC-TTCHHHHHHHHHT-----CSSCEEESTTCCSGGGTGGGBTTBSEEEEC
T ss_pred CcCCCCCHHHHHHHHHHHhhCCCCEEECCCC-CCcHHHHHHHHhc-----CCCCEEECCCCCCHHHHHHHHhhCCEEEec
Confidence 3444446777777788888876444321122 1245677777774 789999995443 22222334678889999
Q ss_pred CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 189 PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
|...|.-. ...++.+.|+++|+++=+|...
T Consensus 254 ~~~~GGit----------------------~~~~ia~~A~~~gi~~~~~~~~ 283 (338)
T 3ijl_A 254 LMKCTGMR----------------------EAWKMVTLAHALGMRVMVGCMT 283 (338)
T ss_dssp HHHHTSHH----------------------HHHHHHHHHHHTTCEEEECCCS
T ss_pred ccccCCHH----------------------HHHHHHHHHHHcCCEEEecCCc
Confidence 99998733 5678999999999999887543
No 246
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=72.34 E-value=15 Score=40.04 Aligned_cols=99 Identities=13% Similarity=0.084 Sum_probs=76.0
Q ss_pred CHHHHHHHHHHHH-HcCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhh--hcCceeeCC
Q 005248 116 DVAGTVEEVMRIA-DQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAE--CFDKIRVNP 189 (706)
Q Consensus 116 Dv~atv~Qi~~L~-~aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~--~~~kiRINP 189 (706)
+.+..++.+.++. +. .|+-|-=| ..++-+.+++++++ .++||++|=- +|++-+...++ +++-|.|.|
T Consensus 271 t~~e~~~~~~~ll~~y--~i~~IEdPl~~dD~~g~~~L~~~-----~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv 343 (439)
T 2akz_A 271 TGDQLGALYQDFVRDY--PVVSIEDPFDQDDWAAWSKFTAN-----VGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKV 343 (439)
T ss_dssp CHHHHHHHHHHHHHHS--CEEEEECCSCTTCHHHHHHHHHT-----CSSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH
T ss_pred CHHHHHHHHHHHHHhC--CCcEEECCCCcccHHHHHHHHhC-----CCCEEEeCCCccCCHHHHHHHHHhCCCCEEEech
Confidence 5566677766654 45 48888766 55678889999885 7899999965 48888888877 499999999
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCC
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL 243 (706)
..+|.-. ...++++.|+++|+.+=+|-.+|.-
T Consensus 344 ~qiGGit----------------------ea~~ia~lA~~~g~~~~~sh~~gEt 375 (439)
T 2akz_A 344 NQIGSVT----------------------EAIQACKLAQENGWGVMVSHRSGET 375 (439)
T ss_dssp HHHCCHH----------------------HHHHHHHHHHHTTCEEEEECCSBCC
T ss_pred hhcCCHH----------------------HHHHHHHHHHHCCCeEEeecCCCcc
Confidence 9998833 4567999999999988676555543
No 247
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=72.23 E-value=15 Score=39.85 Aligned_cols=105 Identities=12% Similarity=0.164 Sum_probs=79.0
Q ss_pred CHHHHHHHHHH-HHHcCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHHHHhh--hcCceeeCC
Q 005248 116 DVAGTVEEVMR-IADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAE--CFDKIRVNP 189 (706)
Q Consensus 116 Dv~atv~Qi~~-L~~aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al~a~~--~~~kiRINP 189 (706)
+.+..++-.++ |.+.+ |+=|-=| ..++-+.+..+++++ |.++||++|=.|. ++-+..+++ +++-|.|-+
T Consensus 262 t~~eai~~~~~ll~~y~--i~~IEdPl~~dD~e~~~~L~~~~---g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv 336 (417)
T 3qn3_A 262 SSEALIERYVELCAKYP--ICSIEDGLAENDFEGWIKLTEKL---GNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKP 336 (417)
T ss_dssp CHHHHHHHHHHHHHHSC--EEEEESSSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECH
T ss_pred CHHHHHHHHHHHHhhcc--eeEEecCCCcccHHHHHHHHHhh---CCCCceecCCcccCCHHHHHHHHHhCCCCEEEecC
Confidence 45666777777 56655 7777644 345678899999863 3469999996653 777777765 499999999
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhH
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~i 247 (706)
..+|.-. ...++++.|+++|+++=+|-.+|.-++..
T Consensus 337 ~qiGGiT----------------------ea~kia~lA~~~G~~v~vsh~sgEt~d~~ 372 (417)
T 3qn3_A 337 NQIGTIT----------------------QTMRTVRLAQRNNYKCVMSHRSGESEDAF 372 (417)
T ss_dssp HHHCSHH----------------------HHHHHHHHHHHTTCEEEEECCSSCCSCCH
T ss_pred CCCCCHH----------------------HHHHHHHHHHHcCCeEEEeCCCCCchHHH
Confidence 9999733 45779999999999998998888765543
No 248
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=71.85 E-value=14 Score=39.00 Aligned_cols=85 Identities=15% Similarity=0.299 Sum_probs=59.3
Q ss_pred cCCCCceEEEeccCC--C-CCCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccC--
Q 005248 98 IGSEHPIRVQTMTTN--D-TKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH-- 169 (706)
Q Consensus 98 IGG~~PI~VQSMt~t--~-T~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIH-- 169 (706)
+||. .-.|..+++. . ..|.+..++++.++.++|.+.|.+-+-. ..+.+.++.||+.+ |-++||..|.|
T Consensus 155 LGg~-~~~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~av---G~d~~l~vDan~~ 230 (398)
T 2pp0_A 155 LGAH-RDSVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREAL---GDEFPLMVDANQQ 230 (398)
T ss_dssp HCCS-CSEEEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHH---CSSSCEEEECTTC
T ss_pred hCCC-CCCeeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHc---CCCCeEEEECCCC
Confidence 3554 2345555442 1 1388999999999999999999998753 45667777777753 66899999988
Q ss_pred CCHHHHHHHhhhcCcee
Q 005248 170 FAPSVALRVAECFDKIR 186 (706)
Q Consensus 170 F~~~~Al~a~~~~~kiR 186 (706)
|+..-|+..++.+++..
T Consensus 231 ~~~~~ai~~~~~l~~~~ 247 (398)
T 2pp0_A 231 WDRETAIRMGRKMEQFN 247 (398)
T ss_dssp SCHHHHHHHHHHHGGGT
T ss_pred CCHHHHHHHHHHHHHcC
Confidence 55566666566566653
No 249
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=71.80 E-value=14 Score=38.43 Aligned_cols=69 Identities=20% Similarity=0.316 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCcee
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiR 186 (706)
.|.+..++++.++.++|.+.+.+-+-. ..+.+.+..||+.+ |-++||..|.| |++.-|+..++.+++..
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 218 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---GDSFPLMVDANMKWTVDGAIRAARALAPFD 218 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---CTTSCEEEECTTCSCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 378889999999999999999998743 35667888888763 56899999988 55666666666666543
No 250
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=71.68 E-value=10 Score=40.64 Aligned_cols=69 Identities=9% Similarity=0.090 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---------HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFD 183 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---------~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ 183 (706)
.|.+..++++.++.++|...+.+-+.. .++.+.++.||+. -|-++||..|.| |+..-|+..++.++
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avRea---vG~d~~L~vDaN~~~~~~~Ai~~~~~Le 254 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREV---IGYDNDLMLECYMGWNLDYAKRMLPKLA 254 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHH---HCSSSEEEEECTTCSCHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHH---cCCCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 478999999999999999999998743 4667777888875 356899999988 55666666666666
Q ss_pred cee
Q 005248 184 KIR 186 (706)
Q Consensus 184 kiR 186 (706)
+..
T Consensus 255 ~~~ 257 (412)
T 3stp_A 255 PYE 257 (412)
T ss_dssp GGC
T ss_pred hcC
Confidence 653
No 251
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=71.29 E-value=5.8 Score=43.80 Aligned_cols=106 Identities=7% Similarity=0.015 Sum_probs=79.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeecc--CCCHHHHHHHhh--hcCceeeCCC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADI--HFAPSVALRVAE--CFDKIRVNPG 190 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADI--HF~~~~Al~a~~--~~~kiRINPG 190 (706)
+.+..++-..+|.+. ..|+=|-=| +.++-+.+..+++++ +.++|||+|= ..|++.+..+++ +++.|.|-|.
T Consensus 282 t~~Elid~y~~lle~-ypIv~IEDPl~~dD~eg~a~Lt~~l---g~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvn 357 (452)
T 3otr_A 282 TGEKLKEVYEGWLKK-YPIISVEDPFDQDDFASFSAFTKDV---GEKTQVIGDDILVTNILRIEKALKDKACNCLLLKVN 357 (452)
T ss_dssp CHHHHHHHHHHHHHH-SCEEEEECCSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHH
T ss_pred cHHHHHHHHHHHHhh-hCceEEecCCChhhHHHHHHHHHhh---CCCeEEEeCccccCCHHHHHHHHhcCCCCEEEeecc
Confidence 456667767675432 347777544 456788899999874 3469999995 458999988887 4999999999
Q ss_pred CCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhH
Q 005248 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247 (706)
Q Consensus 191 Nig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~i 247 (706)
.+|.-. ...++++.|+++|.++=||--+|--++..
T Consensus 358 QIGgIT----------------------Ealka~~lA~~~G~~vmvshrSGETeD~~ 392 (452)
T 3otr_A 358 QIGSVT----------------------EAIEACLLAQKSGWGVQVSHRSGETEDSF 392 (452)
T ss_dssp HHCCHH----------------------HHHHHHHHHHHTTCEEEEECCSSCCSCCH
T ss_pred ccccHH----------------------HHHHHHHHHHHcCCeEEEeCCCCCCchhH
Confidence 999843 34678999999999988888777655543
No 252
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=71.19 E-value=16 Score=38.78 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCH-HHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCC
Q 005248 117 VAGTVEEVMRIADQGADLVRITVQGK-READACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNF 192 (706)
Q Consensus 117 v~atv~Qi~~L~~aGceiVRvtv~~~-~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNi 192 (706)
.+..++-+++|.+++.++.=|-=|-. ++-+.+.+++++ +++||.+|=.+ +..-+..+++ +++-|.|.|..
T Consensus 201 ~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~-----~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~- 274 (389)
T 3s5s_A 201 AGEALALVAHARRLGADVALLEQPVPRDDWDGMKEVTRR-----AGVDVAADESAASAEDVLRVAAERAATVVNIKLMK- 274 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCTTCHHHHHHHHHH-----SSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-
T ss_pred HHHHHHHHHHHhhCCCCeEEEECCCCcccHHHHHHHHhh-----CCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-
Confidence 44445555555444444444443321 245566666664 78999999554 4444444443 59999999999
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
|.-. ....+++.|+++|+++=+|...
T Consensus 275 GGit----------------------~~~~i~~~A~~~gi~~~~~~~~ 300 (389)
T 3s5s_A 275 GGIA----------------------EALDIAAVARAAGLGLMIGGMV 300 (389)
T ss_dssp HHHH----------------------HHHHHHHHHHHTTCEEEECCSS
T ss_pred CCHH----------------------HHHHHHHHHHHcCCeEEecCCc
Confidence 7733 5577999999999999887544
No 253
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=71.01 E-value=11 Score=39.75 Aligned_cols=107 Identities=14% Similarity=0.139 Sum_probs=72.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+++|=- |.. -|.+.+++-+++|++.+.+.+===++-.++.+.++.++++ +++||.+|=+. +..-+.
T Consensus 206 ~G~~~~l~vDa--N~~-~~~~~A~~~~~~l~~~~~~~iEeP~~~~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 277 (388)
T 4h83_A 206 AGDDFIICIDA--NQG-YKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQ-----GSVPVCAGQTEFSASGCR 277 (388)
T ss_dssp HCSSSEEEEEC--TTC-BCHHHHHHHHHHTTTSCCCCEESCBCSTTHHHHHHHHHHH-----SSSCEEECTTCSSHHHHH
T ss_pred cCCCeEEEEec--CcC-CCHHHHHHHHHHhhhcCcceeecCcccccchHHHHHHHhh-----cCCCccCCccccChHhHH
Confidence 45555665532 211 2566666667777777766654334444567778888885 88999999554 455555
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
..++ ++|-|.+.++..|.-. ....+...|..+|+++
T Consensus 278 ~~i~~~a~d~i~~d~~~~GGit----------------------~~~kia~~A~~~gv~v 315 (388)
T 4h83_A 278 DLMETGAIDVCNFDSSWSGGPT----------------------AWLRTAAIATSYDVQM 315 (388)
T ss_dssp HHHHHTCCSEECCCGGGTTCHH----------------------HHHHHHHHHHHTTCEE
T ss_pred HHHHcCCCCeEeecceeCCCHH----------------------HHHHHHHHHHHCCCEE
Confidence 5554 4899999999998733 4567889999999865
No 254
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=70.78 E-value=15 Score=39.82 Aligned_cols=100 Identities=13% Similarity=0.157 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeecc--CCCHHHHHHHhh--hcCceeeC
Q 005248 115 KDVAGTVEEVMRIAD-QGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADI--HFAPSVALRVAE--CFDKIRVN 188 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~-aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADI--HF~~~~Al~a~~--~~~kiRIN 188 (706)
-|.+..++-+.+|.+ .+ |.=|-=| ..++-+.+.++++++ |.++||++|= .+++.-....++ +++-|.|.
T Consensus 279 ~t~~eai~~~~~l~~~~~--i~~iEePl~~~d~~~~~~l~~~~---~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik 353 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNKYP--IITIEDGMDENDWDGWKALTERL---GKKVQLVGDDFFVTNTDYLARGIQEGAANSILIK 353 (444)
T ss_dssp ECHHHHHHHHHHHHHHSC--EEEEESCSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHhCC--cEEEECCCChhhHHHHHHHHHhh---CCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEc
Confidence 456777777778765 54 6666655 235678899999863 3389999995 567777766665 49999999
Q ss_pred CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC
Q 005248 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 189 PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
|..+|.-. ...++++.|+++|+++=+|-++|
T Consensus 354 ~~~~GGit----------------------ea~~ia~lA~~~g~~v~~~h~~g 384 (444)
T 1w6t_A 354 VNQIGTLT----------------------ETFEAIEMAKEAGYTAVVSHRSG 384 (444)
T ss_dssp HHHHCSHH----------------------HHHHHHHHHHHTTCEEEEECCSS
T ss_pred ccccCCHH----------------------HHHHHHHHHHHCCCeEEecCCCC
Confidence 99998733 45779999999999998876653
No 255
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=70.77 E-value=7 Score=42.00 Aligned_cols=69 Identities=16% Similarity=0.329 Sum_probs=53.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC-----------------------------------HHHHHHHHHHHHhhccC
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQG-----------------------------------KREADACFEIKNSLVQK 158 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~-----------------------------------~~~A~al~~I~~~L~~~ 158 (706)
..+.+..+++++++.+.|...+.+-+-. .++.+.++.||+.+
T Consensus 148 ~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~--- 224 (425)
T 3vcn_A 148 GETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVL--- 224 (425)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHH---
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHc---
Confidence 4578999999999999999999986531 23567788888753
Q ss_pred CcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 159 NYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 159 g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
|-++||..|.| |+..-|+..++.+++.
T Consensus 225 G~d~~l~vDaN~~~~~~~A~~~~~~L~~~ 253 (425)
T 3vcn_A 225 GWDVHLLHDVHHRLTPIEAARLGKDLEPY 253 (425)
T ss_dssp CSSSEEEEECTTCCCHHHHHHHHHHHGGG
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 56799999998 5666677666666664
No 256
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=70.71 E-value=8.8 Score=41.20 Aligned_cols=69 Identities=23% Similarity=0.427 Sum_probs=51.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC-------------------------C----------HHHHHHHHHHHHhhccC
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQ-------------------------G----------KREADACFEIKNSLVQK 158 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~-------------------------~----------~~~A~al~~I~~~L~~~ 158 (706)
..+.+..+++++++.+.|...+.+-+- + .++.+.++.||+.+
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~av--- 223 (424)
T 3v3w_A 147 GKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEF--- 223 (424)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHc---
Confidence 457899999999999999999998753 1 24566777777753
Q ss_pred CcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 159 NYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 159 g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
|-++||..|.| |+..-|+..++.+++.
T Consensus 224 G~d~~l~vDaN~~~~~~~A~~~~~~L~~~ 252 (424)
T 3v3w_A 224 GPDIHLLHDVHHRLTPIEAARLGKALEPY 252 (424)
T ss_dssp CSSSEEEEECTTCCCHHHHHHHHHHHGGG
T ss_pred CCCCcEEEeCCCCCCHHHHHHHHHHHHhc
Confidence 56899999988 5566666666666654
No 257
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=70.61 E-value=1.2e+02 Score=33.98 Aligned_cols=137 Identities=14% Similarity=0.079 Sum_probs=84.5
Q ss_pred HHHHHHHHHcCCCEEEEecC----------CHHHHHHHHHHHHhhccCCcCcceeecc---------CCC----HHHHHH
Q 005248 121 VEEVMRIADQGADLVRITVQ----------GKREADACFEIKNSLVQKNYNIPLVADI---------HFA----PSVALR 177 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~----------~~~~A~al~~I~~~L~~~g~~iPLVADI---------HF~----~~~Al~ 177 (706)
++=+..|.++|.+.+=+.-| +..+.+.+..|++.+. ++++.+=. |+. -+-...
T Consensus 50 l~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~----~~~l~~L~R~~N~~G~~~ypddv~~~~ve~ 125 (539)
T 1rqb_A 50 VGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMP----NSRLQMLLRGQNLLGYRHYNDEVVDRFVDK 125 (539)
T ss_dssp GGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCT----TSCEEEEECGGGTTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCC----CCEEEEEeccccccCcccCcccccHHHHHH
Confidence 34466778889999999865 5577888999988532 23333321 331 122234
Q ss_pred Hhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec--CCCCCchhHHHhhCCC
Q 005248 178 VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT--NHGSLSDRIMSYYGDS 254 (706)
Q Consensus 178 a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv--N~GSL~~~il~rygdt 254 (706)
|+++ ++-|||- ..-. + + +++.+.++.||++|..+|.-+ -.|+ +| +
T Consensus 126 a~~aGvd~vrIf----~s~s---d------------~----~ni~~~i~~ak~~G~~v~~~i~~~~~~-------~~--~ 173 (539)
T 1rqb_A 126 SAENGMDVFRVF----DAMN---D------------P----RNMAHAMAAVKKAGKHAQGTICYTISP-------VH--T 173 (539)
T ss_dssp HHHTTCCEEEEC----CTTC---C------------T----HHHHHHHHHHHHTTCEEEEEEECCCST-------TC--C
T ss_pred HHhCCCCEEEEE----Eehh---H------------H----HHHHHHHHHHHHCCCeEEEEEEeeeCC-------CC--C
Confidence 5555 8889973 1100 0 0 356789999999999987554 2232 22 3
Q ss_pred hHHHHHHHHHHHHHHHHCCCCcEEEEEecCC----hhHHHHHHHHHHHh
Q 005248 255 PRGMVESAFEFARICRKLDFHNFLFSMKASN----PVVMVQAYRLLVAE 299 (706)
Q Consensus 255 ~eamVeSAle~~~i~e~~~f~~iviS~KaSn----v~~~i~ayrlla~~ 299 (706)
+ +-+++.++.+.+.|-+ .|++|-+. |..+-+-.+.|.++
T Consensus 174 ~----e~~~~~a~~l~~~Gad--~I~L~DT~G~~~P~~v~~lv~~l~~~ 216 (539)
T 1rqb_A 174 V----EGYVKLAGQLLDMGAD--SIALKDMAALLKPQPAYDIIKAIKDT 216 (539)
T ss_dssp H----HHHHHHHHHHHHTTCS--EEEEEETTCCCCHHHHHHHHHHHHHH
T ss_pred H----HHHHHHHHHHHHcCCC--EEEeCCCCCCcCHHHHHHHHHHHHHh
Confidence 3 5667778888889987 67788544 54444444444444
No 258
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=70.17 E-value=12 Score=39.19 Aligned_cols=70 Identities=19% Similarity=0.331 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC-----C----------------HHHHHHHHHHHHhhccCCcCcceeeccCC--C
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQ-----G----------------KREADACFEIKNSLVQKNYNIPLVADIHF--A 171 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~-----~----------------~~~A~al~~I~~~L~~~g~~iPLVADIHF--~ 171 (706)
.|.+..++++.++.++|.+.|.+-+- + ..+.+.++.||+.+ |-++||..|.|- +
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~av---G~d~~l~vDan~~~~ 221 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAV---GPDVDIIVENHGHTD 221 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHH---CTTSEEEEECTTCSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHh---CCCCeEEEECCCCCC
Confidence 37899999999999999999999752 3 33566777777753 678999999984 4
Q ss_pred HHHHHHHhhhcCceee
Q 005248 172 PSVALRVAECFDKIRV 187 (706)
Q Consensus 172 ~~~Al~a~~~~~kiRI 187 (706)
+.-|+..++.+++..|
T Consensus 222 ~~~ai~~~~~l~~~~i 237 (403)
T 2ox4_A 222 LVSAIQFAKAIEEFNI 237 (403)
T ss_dssp HHHHHHHHHHHGGGCE
T ss_pred HHHHHHHHHHHHhhCC
Confidence 5555555555666543
No 259
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=70.15 E-value=25 Score=34.63 Aligned_cols=142 Identities=14% Similarity=0.100 Sum_probs=87.0
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHH----HHHHHHHHHhhccCCcCcceee---cc-CCCH-
Q 005248 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE----ADACFEIKNSLVQKNYNIPLVA---DI-HFAP- 172 (706)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~----A~al~~I~~~L~~~g~~iPLVA---DI-HF~~- 172 (706)
.++.+++++-.+..+.+.. +..++++|++-|=+..+.... ...+.++++.|++.|+.+..+. |+ +-++
T Consensus 23 ~klgi~~~~~~~~~~~~~~---l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~ 99 (296)
T 2g0w_A 23 CPITISSYTLGTEVSFPKR---VKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDR 99 (296)
T ss_dssp CCEEECGGGGTTTSCHHHH---HHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEECBCCCSSTTTC
T ss_pred CCceeechhcCCCCCHHHH---HHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeehhhhccccCChH
Confidence 3578888877665666655 455677899999888753321 2346778888888898876543 33 2222
Q ss_pred --------HHHHHHh-hh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CCC
Q 005248 173 --------SVALRVA-EC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHG 241 (706)
Q Consensus 173 --------~~Al~a~-~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~G 241 (706)
+.+++.+ +. +..|++.|+ +. +. .+++.+.+.++.+.| +|+ +|++ |+.
T Consensus 100 ~~~~~~~~~~~i~~A~~lGa~~v~~g~~--~~----~~------------~~~~~~~l~~l~~~a--~Gv--~l~lE~~~ 157 (296)
T 2g0w_A 100 TAEQQKKEQTTFHMARLFGVKHINCGLL--EK----IP------------EEQIIVALGELCDRA--EEL--IIGLEFMP 157 (296)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEECCC--SC----CC------------HHHHHHHHHHHHHHH--TTS--EEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCC--CC----CC------------HHHHHHHHHHHHHHh--cCC--EEEEEecC
Confidence 2233333 33 888999665 21 11 466777888899999 775 5566 331
Q ss_pred CCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEe
Q 005248 242 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMK 282 (706)
Q Consensus 242 SL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~K 282 (706)
+. .+.+.-+.++++++.|-.++-+-+=
T Consensus 158 ---------~~-----~~~~~~~~~~l~~~v~~~~vgl~~D 184 (296)
T 2g0w_A 158 ---------YS-----GVADLQAAWRVAEACGRDNAQLICD 184 (296)
T ss_dssp ---------TS-----SSCSHHHHHHHHHHHTCTTEEEEEE
T ss_pred ---------CC-----CCCCHHHHHHHHHHhCCCCeEEEEe
Confidence 00 0233344556777777777777653
No 260
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=70.07 E-value=9.9 Score=40.02 Aligned_cols=70 Identities=17% Similarity=0.341 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC-C-HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCceee
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQ-G-KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIRV 187 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~-~-~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiRI 187 (706)
.|.+..++++.++.++|.+.|.+-+- + ..+.+.++.||+.+ |-++||..|.| |+..-|+..++.+++..|
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avR~a~---g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 217 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMVAEVRRAV---GDDVDLFIDINGAWTYDQALTTIRALEKYNL 217 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHHHHHHHHH---CTTSCEEEECTTCCCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHHHHHHHhh---CCCCEEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 46788999999999999999999874 3 34567777777753 56899999987 556666666666666543
No 261
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=70.03 E-value=8.6 Score=40.66 Aligned_cols=71 Identities=10% Similarity=0.086 Sum_probs=52.8
Q ss_pred HHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHH
Q 005248 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFS 221 (706)
Q Consensus 145 A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~ 221 (706)
-+.+..+++ .+++|+.+|=.+ ++.-+..+++ +++-|.|.|+..|.-. ...
T Consensus 232 ~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit----------------------~~~ 284 (386)
T 3fv9_G 232 WAETKSLRA-----RCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGIT----------------------PML 284 (386)
T ss_dssp HHHHHHHHT-----TCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHH----------------------HHH
T ss_pred HHHHHHHHh-----hCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHH----------------------HHH
Confidence 344555554 478999999654 4555555554 5999999999998733 567
Q ss_pred HHHHHHHHcCCeEEEecCCCC
Q 005248 222 PLVEKCKKYGRAVRIGTNHGS 242 (706)
Q Consensus 222 ~vv~~ake~~~~IRIGvN~GS 242 (706)
++++.|+++|+++=+|-+++|
T Consensus 285 ~i~~~A~~~gi~~~~~~~~es 305 (386)
T 3fv9_G 285 RQRAIAAAAGMVMSVQDTVGS 305 (386)
T ss_dssp HHHHHHHHTTCEEEEECSSCC
T ss_pred HHHHHHHHcCCEEEeCCCCCC
Confidence 799999999999988877654
No 262
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=70.01 E-value=13 Score=38.55 Aligned_cols=67 Identities=15% Similarity=0.225 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCc
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~k 184 (706)
.|.+..++++.++.++|...+.+-+-. ..+.+.++.||+.+ |-++||..|.| |+..-|+..++.+++
T Consensus 139 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~---g~~~~l~vDan~~~~~~~a~~~~~~l~~ 210 (366)
T 1tkk_A 139 NSPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV---GSAVKLRLDANQGWRPKEAVTAIRKMED 210 (366)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH---CSSSEEEEECTTCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHHhh
Confidence 367888999999999999999998763 44667788888753 56899999987 555556655555655
No 263
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=69.67 E-value=12 Score=39.09 Aligned_cols=68 Identities=18% Similarity=0.279 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEEecCC--H-HHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 115 KDVAGTVEEVMRIADQ-GADLVRITVQG--K-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~a-GceiVRvtv~~--~-~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
.+.+..++++.++.+. |...+.+-+-. . ++.+.++.||+.+ |-+++|..|.| |+..-|+..++.+++.
T Consensus 138 ~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~---g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 211 (367)
T 3dg3_A 138 DDPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERF---GDAIELYVDGNRGWSAAESLRAMREMADL 211 (367)
T ss_dssp SCHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHH---GGGSEEEEECTTCSCHHHHHHHHHHTTTS
T ss_pred CCHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHh---CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 4679999999999999 99999998732 3 7888888888863 56799999988 4555555666666664
No 264
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=69.61 E-value=1.1e+02 Score=31.88 Aligned_cols=69 Identities=9% Similarity=0.113 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEEecC--C-HHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhhhcCcee
Q 005248 115 KDVAGTVEEVMRIADQ-GADLVRITVQ--G-KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDKIR 186 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~a-GceiVRvtv~--~-~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~~~~kiR 186 (706)
.|.+..++++.+..+. |...+.+-+- + .++.+.++.||+. -|-++||..|.|- +..-|+..++.++...
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~---~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~ 224 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER---VDSAVRIAIDGNGKWDLPTCQRFCAAAKDLD 224 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH---SCTTCEEEEECTTCCCHHHHHHHHHHTTTSC
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH---cCCCCcEEeeCCCCCCHHHHHHHHHHHhhcC
Confidence 3789999999999999 9999999875 3 4677778888875 3567999999884 5555555666666543
No 265
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=69.55 E-value=17 Score=38.05 Aligned_cols=65 Identities=14% Similarity=0.304 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhhhcCce
Q 005248 118 AGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDKI 185 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~~~~ki 185 (706)
+..++++.++.++|.+.|.+-+-. ..+.+.++.||+.+ |-++||..|.|- +..-|+..++.+++.
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G~d~~l~vDan~~~~~~~a~~~~~~l~~~ 210 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---GSSITMILDANQSYDAAAAFKWERYFSEW 210 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---CTTSEEEEECTTCCCHHHHHTTHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---CCCCEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 888999999999999999998754 55678888888864 568999999884 445455455556654
No 266
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=69.49 E-value=18 Score=38.59 Aligned_cols=96 Identities=9% Similarity=0.047 Sum_probs=71.5
Q ss_pred CHHHHHHHHH-HHHHcCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhh--hcCceeeCC
Q 005248 116 DVAGTVEEVM-RIADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAE--CFDKIRVNP 189 (706)
Q Consensus 116 Dv~atv~Qi~-~L~~aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~--~~~kiRINP 189 (706)
|.+..++-+. .|.+.+ |.=|-=| ..++-+.+.+++++ +++||++|=+ .++.-+..+++ +++-|.|.|
T Consensus 268 ~~~~ai~~~~~~l~~~~--i~~iEeP~~~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 340 (427)
T 2pa6_A 268 TREELLDYYKALVDEYP--IVSIEDPFHEEDFEGFAMITKE-----LDIQIVGDDLFVTNVERLRKGIEMKAANALLLKV 340 (427)
T ss_dssp CHHHHHHHHHHHHHHSC--EEEEECCSCTTCHHHHHHHHHH-----SSSEEEESTTTTTCHHHHHHHHHHTCCSEEEECH
T ss_pred CHHHHHHHHHHHHhhCC--CcEEEcCCChhhHHHHHHHHhh-----CCCeEEeCccccCCHHHHHHHHHhCCCCEEEEcc
Confidence 5566666655 566665 6666655 34567888899886 7899999965 44676666665 499999999
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
..+|.-. ...++++.|+++|+++=+|-++
T Consensus 341 ~~~GGit----------------------ea~~ia~lA~~~g~~~~~~h~~ 369 (427)
T 2pa6_A 341 NQIGTLS----------------------EAVDAAQLAFRNGYGVVVSHRS 369 (427)
T ss_dssp HHHCSHH----------------------HHHHHHHHHHTTTCEEEEECCS
T ss_pred cccCCHH----------------------HHHHHHHHHHHcCCeEEEeCCC
Confidence 9998733 4577999999999999886654
No 267
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=69.05 E-value=46 Score=34.69 Aligned_cols=207 Identities=14% Similarity=0.137 Sum_probs=126.1
Q ss_pred eeEEEceeecCCCCceEEEeccCCCCC--C---HHHHHHHHHHHHHcCCCEEEEe----------------cCCHHHHHH
Q 005248 89 RTVMVGNVAIGSEHPIRVQTMTTNDTK--D---VAGTVEEVMRIADQGADLVRIT----------------VQGKREADA 147 (706)
Q Consensus 89 r~V~VG~v~IGG~~PI~VQSMt~t~T~--D---v~atv~Qi~~L~~aGceiVRvt----------------v~~~~~A~a 147 (706)
..+++|++.+ -|-|+.-.||..... | .+..++--.+.++-|+-+|=.- .-+.+..+.
T Consensus 7 ~p~~ig~~~l--~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~ 84 (340)
T 3gr7_A 7 SPYTIRGLTL--KNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAG 84 (340)
T ss_dssp SCEEETTEEE--SSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHH
T ss_pred CCEeECCEEE--cCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHH
Confidence 4578888887 789999999875543 2 5677777778888787776321 124567889
Q ss_pred HHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHH
Q 005248 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKC 227 (706)
Q Consensus 148 l~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~a 227 (706)
++++.+...+.|.. +++=++--.+.+.. ..--+-|-.+......-...+.| .+|+++|-+.|..-.+.|
T Consensus 85 ~~~~~~~vh~~G~~--i~~QL~H~Gr~~~~-----~~~~~~pS~~~~~~~~~~p~~mt----~~eI~~ii~~f~~aA~~a 153 (340)
T 3gr7_A 85 LRELVGLVKEHGAA--IGIQLAHAGRKSQV-----PGEIIAPSAVPFDDSSPTPKEMT----KADIEETVQAFQNGARRA 153 (340)
T ss_dssp HHHHHHHHHHTTCE--EEEEEECCGGGCCS-----SSCCEESSSCCSSTTSCCCEECC----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCe--EEEEeccCCCccCC-----CCCccCCCCccccCCCCCCccCC----HHHHHHHHHHHHHHHHHH
Confidence 99999998888865 34444433443211 00012333332111001123444 357888889999999999
Q ss_pred HHcCC-eEEEecCCCCCchhHHH--------hhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChh-----HHHHHH
Q 005248 228 KKYGR-AVRIGTNHGSLSDRIMS--------YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV-----VMVQAY 293 (706)
Q Consensus 228 ke~~~-~IRIGvN~GSL~~~il~--------rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~-----~~i~ay 293 (706)
++.|- .|-|=.-||-|-+.+|+ +||.+.+.-..-++|-++-.++.= ++.|++|-|-.. ...+-+
T Consensus 154 ~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v--~~pv~vRls~~~~~~~g~~~~~~ 231 (340)
T 3gr7_A 154 KEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW--DGPLFVRISASDYHPDGLTAKDY 231 (340)
T ss_dssp HHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSCEEEEEESCCCSTTSCCGGGH
T ss_pred HHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc--CCceEEEeccccccCCCCCHHHH
Confidence 99885 46666667776555554 467665554455555555444321 557888887310 123345
Q ss_pred HHHHHhhhcCCCCCcccc
Q 005248 294 RLLVAEMYVHGWDYPLHL 311 (706)
Q Consensus 294 rlla~~~~~eg~~YPLHL 311 (706)
..+++++++.|.|| ||+
T Consensus 232 ~~la~~L~~~Gvd~-i~v 248 (340)
T 3gr7_A 232 VPYAKRMKEQGVDL-VDV 248 (340)
T ss_dssp HHHHHHHHHTTCCE-EEE
T ss_pred HHHHHHHHHcCCCE-EEE
Confidence 55777777778886 665
No 268
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=68.85 E-value=15 Score=38.38 Aligned_cols=66 Identities=14% Similarity=0.172 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFD 183 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ 183 (706)
.|.+..++++.++.++|.+.+.+-+-. ..+.+.++.||+. -|-++||..|.| |++.-|++.++.++
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDan~~~~~~~a~~~~~~l~ 214 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG---LPDGHRVTFDVNRAWTPAIAVEVLNSVR 214 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS---CCTTCEEEEECTTCCCHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH---hCCCCEEEEeCCCCCCHHHHHHHHHHhC
Confidence 467888999999999999999997653 3456777777774 356899999988 44554544444454
No 269
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=68.77 E-value=1.1 Score=45.02 Aligned_cols=17 Identities=35% Similarity=1.009 Sum_probs=14.5
Q ss_pred CceEeccCCCCcccccH
Q 005248 639 KTEYVSCPSCGRTLFDL 655 (706)
Q Consensus 639 kte~ISCPsCGRTlfDL 655 (706)
+-++|.||.|||-||.-
T Consensus 219 ~~~Iv~Cp~CgRIL~~~ 235 (256)
T 3na7_A 219 SGDMITCPYCGRILYAE 235 (256)
T ss_dssp SSSCEECTTTCCEEECS
T ss_pred CCCEEECCCCCeeEEeC
Confidence 45789999999999964
No 270
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=68.65 E-value=8.6 Score=37.03 Aligned_cols=125 Identities=10% Similarity=0.153 Sum_probs=74.5
Q ss_pred HHHHHHHHHHcCCCEEEEec------CCHHHHHHHHHHHHhhccCCcCcceeeccC-CCHHHHHHHhhh-cCceeeCCCC
Q 005248 120 TVEEVMRIADQGADLVRITV------QGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv------~~~~~A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al~a~~~-~~kiRINPGN 191 (706)
.++.++++.++|++.+=+.. +.... +.++.|++. +++|+++.-- .++.-+..+++. ++.|=+.-..
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~-----~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~ 106 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGK-----LDVQVELSGGIRDDESLAAALATGCARVNVGTAA 106 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHH-----CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHh-----cCCcEEEECCCCCHHHHHHHHHcCCCEEEECchH
Confidence 45667789999999998864 33333 777888875 7899987422 356667777776 8888664443
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC----CCchhHHHhhC-CChHHHHHHHHHHH
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG----SLSDRIMSYYG-DSPRGMVESAFEFA 266 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G----SL~~~il~ryg-dt~eamVeSAle~~ 266 (706)
+.++ ..+.+..+++|..+.+|++.- +. .+.-+ | .... ...++++
T Consensus 107 l~~p-------------------------~~~~~~~~~~g~~~~~~ld~~~~~~~~--~v~~~-g~~~~~---~~~~e~~ 155 (244)
T 2y88_A 107 LENP-------------------------QWCARVIGEHGDQVAVGLDVQIIDGEH--RLRGR-GWETDG---GDLWDVL 155 (244)
T ss_dssp HHCH-------------------------HHHHHHHHHHGGGEEEEEEEEEETTEE--EEEEG-GGTEEE---EEHHHHH
T ss_pred hhCh-------------------------HHHHHHHHHcCCCEEEEEeccccCCCC--EEEEC-CccCCC---CCHHHHH
Confidence 3221 123344445555566666531 11 11111 2 1000 0346778
Q ss_pred HHHHHCCCCcEEEEE
Q 005248 267 RICRKLDFHNFLFSM 281 (706)
Q Consensus 267 ~i~e~~~f~~iviS~ 281 (706)
+.+++.|++-|.+.-
T Consensus 156 ~~~~~~G~~~i~~~~ 170 (244)
T 2y88_A 156 ERLDSEGCSRFVVTD 170 (244)
T ss_dssp HHHHHTTCCCEEEEE
T ss_pred HHHHhCCCCEEEEEe
Confidence 888889999887753
No 271
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=68.53 E-value=5.3 Score=38.81 Aligned_cols=151 Identities=8% Similarity=0.065 Sum_probs=79.7
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHH---HHHHHHHHHhhccCCcCcceeeccC-CCHHHHHHHhhh-cCceeeCCCCCCc
Q 005248 120 TVEEVMRIADQGADLVRITVQGKRE---ADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAEC-FDKIRVNPGNFAD 194 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~~~---A~al~~I~~~L~~~g~~iPLVADIH-F~~~~Al~a~~~-~~kiRINPGNig~ 194 (706)
.++.++++.++|++.+=++-++... -.++..|++ +. .+++|+++.-- .++.-+..+++. +++|=+.-..+.+
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~-i~--~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~~ 108 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEK-LS--EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLED 108 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHH-GG--GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEecccccccCCchhHHHHHH-HH--hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhhC
Confidence 4667888899999988876332211 123444443 33 27899987433 345566666665 8887432222211
Q ss_pred chhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCC
Q 005248 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDF 274 (706)
Q Consensus 195 ~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f 274 (706)
++ .+-+. +++|-.+.+|+..- .....-.|-.. .--.+..|+++.+++.|+
T Consensus 109 p~-------------------------~~~~~-~~~g~~i~~~~d~~---~~~v~~~g~~~-~~~~~~~e~~~~~~~~G~ 158 (241)
T 1qo2_A 109 PS-------------------------FLKSL-REIDVEPVFSLDTR---GGRVAFKGWLA-EEEIDPVSLLKRLKEYGL 158 (241)
T ss_dssp TT-------------------------HHHHH-HTTTCEEEEEEEEE---TTEECCTTCSS-CSCCCHHHHHHHHHTTTC
T ss_pred hH-------------------------HHHHH-HHcCCcEEEEEEec---CCEEEECCcee-cCCCCHHHHHHHHHhCCC
Confidence 11 12233 55666677777431 00111122100 000135677888889999
Q ss_pred CcEEEEEecCChhH----HHHHHHHHHHhhhcCCCCCcc
Q 005248 275 HNFLFSMKASNPVV----MVQAYRLLVAEMYVHGWDYPL 309 (706)
Q Consensus 275 ~~iviS~KaSnv~~----~i~ayrlla~~~~~eg~~YPL 309 (706)
.-|.+.--..+ .. -.+.++.+++. .+.|+
T Consensus 159 ~~i~~t~~~~~-g~~~g~~~~~i~~l~~~-----~~iPv 191 (241)
T 1qo2_A 159 EEIVHTEIEKD-GTLQEHDFSLTKKIAIE-----AEVKV 191 (241)
T ss_dssp CEEEEEETTHH-HHTCCCCHHHHHHHHHH-----HTCEE
T ss_pred CEEEEEeeccc-ccCCcCCHHHHHHHHHh-----cCCcE
Confidence 98888532111 10 15666666666 45665
No 272
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=68.48 E-value=14 Score=38.84 Aligned_cols=69 Identities=12% Similarity=0.333 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC-----C----------------HHHHHHHHHHHHhhccCCcCcceeeccC--CCH
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQ-----G----------------KREADACFEIKNSLVQKNYNIPLVADIH--FAP 172 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~-----~----------------~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~ 172 (706)
|.+..++++.++.++|.+-|.+-+- + ..+.+.+..||+. -|-++||..|.| |++
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a---~G~d~~l~vDan~~~~~ 228 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDA---VGPDVDIIAEMHAFTDT 228 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHH---HCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHh---cCCCCEEEEECCCCCCH
Confidence 7899999999999999999999762 3 3356677777775 367899999988 455
Q ss_pred HHHHHHhhhcCceee
Q 005248 173 SVALRVAECFDKIRV 187 (706)
Q Consensus 173 ~~Al~a~~~~~kiRI 187 (706)
.-|++.++.++++.|
T Consensus 229 ~~a~~~~~~l~~~~i 243 (407)
T 2o56_A 229 TSAIQFGRMIEELGI 243 (407)
T ss_dssp HHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHhcCC
Confidence 555555666666543
No 273
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=68.27 E-value=14 Score=38.84 Aligned_cols=69 Identities=17% Similarity=0.326 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC-----C---------------------HHHHHHHHHHHHhhccCCcCcceeeccC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQ-----G---------------------KREADACFEIKNSLVQKNYNIPLVADIH 169 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~-----~---------------------~~~A~al~~I~~~L~~~g~~iPLVADIH 169 (706)
|.+..++++.+..++|.+-|.+-+- + ..+.+.+..||+. -|-++||..|.|
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a---~G~d~~l~vDan 226 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREA---MGDDADIIVEIH 226 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHH---HCSSSEEEEECT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHh---cCCCCEEEEECC
Confidence 7899999999999999999999751 2 2356667777764 367899999998
Q ss_pred --CCHHHHHHHhhhcCceee
Q 005248 170 --FAPSVALRVAECFDKIRV 187 (706)
Q Consensus 170 --F~~~~Al~a~~~~~kiRI 187 (706)
|++.-|+..++.+++..|
T Consensus 227 ~~~~~~~ai~~~~~l~~~~i 246 (410)
T 2gl5_A 227 SLLGTNSAIQFAKAIEKYRI 246 (410)
T ss_dssp TCSCHHHHHHHHHHHGGGCE
T ss_pred CCCCHHHHHHHHHHHHhcCC
Confidence 455556566666666544
No 274
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=67.97 E-value=16 Score=38.22 Aligned_cols=70 Identities=13% Similarity=0.179 Sum_probs=53.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecC--C-HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCc
Q 005248 113 DTKDVAGTVEEVMRIADQGADLVRITVQ--G-KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (706)
Q Consensus 113 ~T~Dv~atv~Qi~~L~~aGceiVRvtv~--~-~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~k 184 (706)
...+.+..++|+.+..+.|..-+.+-+- + .++.+.+..|++.+. |-+++|..|.| |++.-|+..++.++.
T Consensus 147 ~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~~~~~di~~v~~vr~a~~--g~~~~l~vDaN~~~~~~~A~~~~~~l~~ 221 (376)
T 4h2h_A 147 GVMEPDEAARQALEKQREGYSRLQVKLGARPIEIDIEAIRKVWEAVR--GTGIALAADGNRGWTTRDALRFSRECPD 221 (376)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCSSCHHHHHHHHHHHHHHHT--TSCCEEEEECTTCCCHHHHHHHHHHCTT
T ss_pred ccCCHHHHHHHHHHHHhcCceEEEEecCCCCHHHHHHHHHHHHhhcc--CCeeEEEEeeccCCCHHHHHHHHHHHhh
Confidence 4457789999999999999999988763 3 457788888887653 67899999988 566666666555543
No 275
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=67.94 E-value=18 Score=39.25 Aligned_cols=109 Identities=14% Similarity=0.171 Sum_probs=71.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (706)
+|.+.+++|= .|. .-+.+..++-+++|++.|.+.+===++ .++.+.+.+++++|. .+++||.+|=++ +..-+.
T Consensus 242 ~G~~~~l~vD--aN~-~~~~~~A~~~~~~L~~~~~~~iEeP~~-~~d~~~~~~l~~~l~--~~~iPIa~gE~~~~~~~~~ 315 (441)
T 4a35_A 242 IGPEKTLMMD--ANQ-RWDVPEAVEWMSKLAKFKPLWIEEPTS-PDDILGHATISKALV--PLGIGIATGEQCHNRVIFK 315 (441)
T ss_dssp HCTTSEEEEE--CTT-CCCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHHHG--GGTCEEEECTTCCSHHHHH
T ss_pred hCCCCeEEEE--CCC-CCCHHHHHHHHHhhcccCccEEeCCCC-cccHHHHHHHHHhcc--CCCCCEEeCCccccHHHHH
Confidence 3555555553 111 123455566666676666665542233 244566777777543 267999999654 455555
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
.+++ +++-|.+.|+..|.-. ....+...|+++|+++
T Consensus 316 ~~l~~~a~div~~d~~~~GGit----------------------~~~kia~lA~~~gv~v 353 (441)
T 4a35_A 316 QLLQAKALQFLQIDSCRLGSVN----------------------ENLSVLLMAKKFEIPV 353 (441)
T ss_dssp HHHHTTCCSEECCCTTTSSHHH----------------------HHHHHHHHHHHTTCCB
T ss_pred HHHHcCCCCEEEECccccCCHH----------------------HHHHHHHHHHHcCCEE
Confidence 5554 5999999999999733 5678999999999998
No 276
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=67.89 E-value=14 Score=38.30 Aligned_cols=69 Identities=13% Similarity=0.295 Sum_probs=51.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC-C-HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHH-HHhhhcCceee
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQ-G-KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVAL-RVAECFDKIRV 187 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~-~-~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al-~a~~~~~kiRI 187 (706)
|.+..++++.++.++|.+.+.+-+- + ..+.+.+..||+.+ |-++||..|.| |+..-|+ ..++.+++..|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~---g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i 214 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRIEAVRERV---GNDIAIRVDVNQGWKNSANTLTALRSLGHLNI 214 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH---CTTSEEEEECTTTTBSHHHHHHHHHTSTTSCC
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 6778899999999999999999774 2 45667788888753 56799999988 5556666 66666776543
No 277
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=67.83 E-value=82 Score=33.29 Aligned_cols=138 Identities=19% Similarity=0.194 Sum_probs=86.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHHHHhhhc--Cce
Q 005248 113 DTKDVAGTVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECF--DKI 185 (706)
Q Consensus 113 ~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~---~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al~a~~~~--~ki 185 (706)
...+.+..++|+.++.+.|...+.+-+-.. ++.+.++.||+.+ + +++|..|-|-. +.-|+..++.+ +.+
T Consensus 141 ~~~~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~~---~-~~~L~vDaN~~w~~~~A~~~~~~L~~~~~ 216 (389)
T 3s5s_A 141 TTGSPERAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAAA---P-GASLILDGNGGLTAGEALALVAHARRLGA 216 (389)
T ss_dssp CSSCSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHHHHHHHHC---T-TCEEEEECTTCSCHHHHHHHHHHHHHTTC
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHHHHHHHhC---C-CCeEEEECCCCCCHHHHHHHHHHHhhCCC
Confidence 345778999999999999999999988654 7888899999875 2 47999998755 45555555566 555
Q ss_pred eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCch--hHHHhhC-C--Ch---HH
Q 005248 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD--RIMSYYG-D--SP---RG 257 (706)
Q Consensus 186 RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~--~il~ryg-d--t~---ea 257 (706)
+| -- ||+-.- .+.+..+.+.++..++||=.|=+.-++.+ ++++.-. | .+ .|
T Consensus 217 ~i-----~~----iEeP~~------------~~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~G 275 (389)
T 3s5s_A 217 DV-----AL----LEQPVP------------RDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMKG 275 (389)
T ss_dssp EE-----EE----EECCSC------------TTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred Ce-----EE----EECCCC------------cccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCCC
Confidence 43 11 111110 01234455666677888876665555432 2222211 1 11 14
Q ss_pred HHHHHHHHHHHHHHCCCC
Q 005248 258 MVESAFEFARICRKLDFH 275 (706)
Q Consensus 258 mVeSAle~~~i~e~~~f~ 275 (706)
=+..+++.+++|+..|..
T Consensus 276 Git~~~~i~~~A~~~gi~ 293 (389)
T 3s5s_A 276 GIAEALDIAAVARAAGLG 293 (389)
T ss_dssp HHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHcCCe
Confidence 456677777777777764
No 278
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=67.69 E-value=13 Score=39.08 Aligned_cols=67 Identities=13% Similarity=0.211 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCc
Q 005248 115 KDVAGTVEEVMRIADQ-GADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~a-GceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~k 184 (706)
.|.+..++++.+..+. |...+.+-+-. .++.+.++.||+. -|-++||..|.| |+..-|+..++.+++
T Consensus 147 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a---~g~~~~l~vDan~~~~~~~A~~~~~~l~~ 219 (383)
T 3i4k_A 147 LPLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELARE---VGDRVSLRIDINARWDRRTALHYLPILAE 219 (383)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHT---TTTTSEEEEECTTCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHH---cCCCCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 4678999999998887 99999998854 5677777777774 356799999998 455555554554544
No 279
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=67.55 E-value=23 Score=37.29 Aligned_cols=69 Identities=13% Similarity=0.287 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCceee
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIRV 187 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiRI 187 (706)
|.+..++++.++.++|.+.|.+-+-. ..+.+.++.||+.+ |-++||..|.| |++.-|+..++.+++..|
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av---g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 235 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL---GDAVPLMVDANQQWDRPTAQRMCRIFEPFNL 235 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH---CTTSCEEEECTTCCCHHHHHHHHHHHGGGCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc---CCCCEEEEECCCCCCHHHHHHHHHHHHhhCC
Confidence 78999999999999999999998753 34567777777753 66899999988 555666665665665543
No 280
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=66.42 E-value=18 Score=38.07 Aligned_cols=67 Identities=18% Similarity=0.196 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCC-----------HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCc
Q 005248 118 AGTVEEVMRIADQGADLVRITVQG-----------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~~-----------~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~k 184 (706)
+..++++.+..++|.+-+.+-+-. ..+.+.+..||+.+ |-+++|..|.| |++.-|+..++.+++
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~---g~d~~l~vDan~~~~~~~ai~~~~~l~~ 226 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVA---GPAGKIMIDANNAYNLNLTKEVLAALSD 226 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHH---CTTCCEEEECTTCCCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 777899999999999999998765 34556666776643 67899999998 556666666666776
Q ss_pred eee
Q 005248 185 IRV 187 (706)
Q Consensus 185 iRI 187 (706)
.+|
T Consensus 227 ~~i 229 (392)
T 3p3b_A 227 VNL 229 (392)
T ss_dssp SCE
T ss_pred cCC
Confidence 544
No 281
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=66.36 E-value=24 Score=37.01 Aligned_cols=225 Identities=15% Similarity=0.232 Sum_probs=126.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHhhccCCcCccee----eccCCCHHHHHHHhh-h-cC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLV----ADIHFAPSVALRVAE-C-FD 183 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~------~A~al~~I~~~L~~~g~~iPLV----ADIHF~~~~Al~a~~-~-~~ 183 (706)
-.+..+++..++++||+-+|=+-+-+.+ +.+.+.++.+.+|+ .+++.+. +.+.+++.-=++.+. . -|
T Consensus 30 TpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~-~~d~iI~~TTgg~~~~~~eerla~~~~~~Pe 108 (311)
T 3e02_A 30 TPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKE-RTDAILNITTGGGLGMSLDERLAPARAARPE 108 (311)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHH-HCCCEEEECSSCSTTCCHHHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHH-hCCcEEEECCCCCCCCCHHHHHHHHHhcCCC
Confidence 3588899999999999999999988842 34444444444444 2665443 567777654344432 1 34
Q ss_pred ceeeCCCCCCcc----hhhccccccc-hHHHHHHH-hhH----HhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCC
Q 005248 184 KIRVNPGNFADR----RAQFEQLEYT-DDEYQKEL-QHI----EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253 (706)
Q Consensus 184 kiRINPGNig~~----~k~F~~~~Yt-deeY~~El-~~I----~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygd 253 (706)
-.=+|.|-+-.. .++|+...++ +..|.+.- +.+ .+.+..+.+.++++|+..=|.+ .+
T Consensus 109 ~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e~----fd--------- 175 (311)
T 3e02_A 109 VASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFEC----YD--------- 175 (311)
T ss_dssp EEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEE----CS---------
T ss_pred eeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEEE----Ec---------
Confidence 445788854221 1224433333 22344322 222 2357779999999999998887 22
Q ss_pred ChHHHHHHHHHHHHHHHHCCC------CcEEEEEec---CChhHHHHHHHHHHHhhhcCCCCCcccccccccCCCCCCch
Q 005248 254 SPRGMVESAFEFARICRKLDF------HNFLFSMKA---SNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324 (706)
Q Consensus 254 t~eamVeSAle~~~i~e~~~f------~~iviS~Ka---Snv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~g~~G~I 324 (706)
-+++..+..+ .+.|. -++|+-++. +++..+. ++...+.++-.. + .++.|+=.|-..--..
T Consensus 176 --~g~l~~~~~l----~~~Gl~~~p~~~~~vlGv~~g~~~~~~~L~-~~~~~~~~~~~~--~--~~wsv~~~Gr~~~p~~ 244 (311)
T 3e02_A 176 --VGHLYNLAHF----VDRKLVEPPFFLQCVFGILGGIGADPENLL-HMRTIADRLFGQ--D--YYLSVLAAGRHQMPFV 244 (311)
T ss_dssp --HHHHHHHHHH----HHTTSSCSCEEEEEEECCBTSCCSCHHHHH-HHHHHHHHHHTT--S--EEEEEEECGGGHHHHH
T ss_pred --HHHHHHHHHH----HHcCCCCCCeEEEEEecCCCCCCCCHHHHH-HHHHHHHhhCCC--C--CceEEEeeChhhHHHH
Confidence 2555554443 34444 567776665 5655443 343333332111 2 3555655554444445
Q ss_pred hhHHHHHHHhhcCCCceeEEecCC-CC--cccchHHHHHHH-hhh
Q 005248 325 KSAIGIGTLLQDGLGDTIRVSLTE-PP--EKEIDPCRRLAN-LGM 365 (706)
Q Consensus 325 KSavGiG~LL~dGIGDTIRVSLT~-dP--~~EV~va~~l~~-~~~ 365 (706)
.-|+.+|-=.-=|+.|++..+--. .| .+=|.-+.+|++ ++.
T Consensus 245 ~~A~~~GGhvRVGlEDnl~~~~G~lA~sNaelV~~~~~i~~~lgr 289 (311)
T 3e02_A 245 TMSAILGGNVRVGLEDSLYSGKGQLATSNAEQVRKIRRIIEELSL 289 (311)
T ss_dssp HHHHHTTCEEEESTTTCSEEETTEECSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCeEEccCcceecCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 556666655667888888876321 12 223444555555 443
No 282
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=66.23 E-value=14 Score=38.71 Aligned_cols=68 Identities=13% Similarity=0.300 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
.+.+..++|+.++.+.|...+.+-+-. .++.+.++.||+.+ |-++||..|.| |+..-|+..++.+++.
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~---g~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 210 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREAA---GDSITLRIDANQGWSVETAIETLTLLEPY 210 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH---CSSSEEEEECTTCBCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCChHHHHHHHHHHhhc
Confidence 577999999999999999999998743 57788888888753 56799999987 4455555555656654
No 283
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=66.22 E-value=25 Score=38.27 Aligned_cols=62 Identities=18% Similarity=0.374 Sum_probs=47.7
Q ss_pred HHHHHHHHHHcCCCEEEE-ecCC-H-HHHHHHHHHHHhhccCCc-Ccceee-ccCCCHHHHHHHhhh-cCceee
Q 005248 120 TVEEVMRIADQGADLVRI-TVQG-K-READACFEIKNSLVQKNY-NIPLVA-DIHFAPSVALRVAEC-FDKIRV 187 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRv-tv~~-~-~~A~al~~I~~~L~~~g~-~iPLVA-DIHF~~~~Al~a~~~-~~kiRI 187 (706)
..+++.++.++|++.|=| +..+ . ...+.++.|++. + ++|+++ ++ .++..|..+.++ +|.|.+
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~-----~~~~pvi~~~v-~t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK-----YPHLQVIGGNV-VTAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH-----CTTCEEEEEEE-CSHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh-----CCCCceEeccc-chHHHHHHHHHcCCCEEEE
Confidence 567888999999999988 2222 2 234778888885 4 689987 67 568888888887 999988
No 284
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=66.19 E-value=12 Score=39.46 Aligned_cols=69 Identities=13% Similarity=0.255 Sum_probs=52.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
-.+.+..++++.++.+.|...+.+-+-. .++.+.++.||+.+ |-++||..|.| |+..-|+..++.++..
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~---g~d~~l~vDan~~~~~~~A~~~~~~l~~~ 221 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRV---GADVEILVDANQSLGRHDALAMLRILDEA 221 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH---CTTSEEEEECTTCCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHc---CCCceEEEECCCCcCHHHHHHHHHHHHhc
Confidence 4567899999999999999999998753 56777888888753 56799999988 5555565555555543
No 285
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=66.16 E-value=11 Score=39.98 Aligned_cols=69 Identities=13% Similarity=0.254 Sum_probs=51.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC--------------------------HHHHHHHHHHHHhhccCCcCcceeec
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQG--------------------------KREADACFEIKNSLVQKNYNIPLVAD 167 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~--------------------------~~~A~al~~I~~~L~~~g~~iPLVAD 167 (706)
..+.+..+++++++.+.|...+.+-+-. .++.+.++.||+. -|-++||..|
T Consensus 131 ~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a---~G~d~~l~vD 207 (401)
T 3sbf_A 131 SDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREK---YGNQFHILHD 207 (401)
T ss_dssp ESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHH---HTTSSEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHH---cCCCCEEEEE
Confidence 4578999999999999999999987521 2456667777775 3567999999
Q ss_pred cC--CCHHHHHHHhhhcCce
Q 005248 168 IH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 168 IH--F~~~~Al~a~~~~~ki 185 (706)
.| |+..-|+..++.+++.
T Consensus 208 an~~~~~~~A~~~~~~L~~~ 227 (401)
T 3sbf_A 208 VHERLFPNQAIQFAKEVEQY 227 (401)
T ss_dssp CTTCSCHHHHHHHHHHHGGG
T ss_pred CCCCCCHHHHHHHHHHHHhc
Confidence 98 4566666666666654
No 286
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=66.14 E-value=13 Score=38.53 Aligned_cols=68 Identities=7% Similarity=0.189 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecCC--H-HHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 115 KDVAGTVEEVMRIAD-QGADLVRITVQG--K-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~-aGceiVRvtv~~--~-~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
.|.+..++++.+..+ +|.+.+.+-+-. . ++.+.++.||+.+ |-++||..|.| |+..-|+..++.+++.
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 214 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---GDRASVRVDVNQGWDEQTASIWIPRLEEA 214 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---GGGCEEEEECTTCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---CCCCEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 367888999999999 999999987653 3 4667888888753 45789999987 4555555555555554
No 287
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=66.03 E-value=58 Score=34.55 Aligned_cols=212 Identities=14% Similarity=0.157 Sum_probs=121.1
Q ss_pred eeEEEceeecCCCCceEEEeccCCCCCC---HHHHHHHHHHHHHcCCCE---EEEe-----c------CCHHHHHHHHHH
Q 005248 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKD---VAGTVEEVMRIADQGADL---VRIT-----V------QGKREADACFEI 151 (706)
Q Consensus 89 r~V~VG~v~IGG~~PI~VQSMt~t~T~D---v~atv~Qi~~L~~aGcei---VRvt-----v------~~~~~A~al~~I 151 (706)
..+++|++.+ .|.|+.-.||.....| ++..++-..+.+.+|-=| +-+. . -+.+..+.++.+
T Consensus 13 ~P~~ig~~~l--~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l 90 (377)
T 2r14_A 13 TPLQLGSLSL--PNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGV 90 (377)
T ss_dssp SCEEETTEEE--SCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHH
T ss_pred CCeeECCEEe--cCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHH
Confidence 3488898888 6899999999875544 566666666666555322 2221 0 145666789999
Q ss_pred HHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcch--------------hhc-cccccchHHHHHHHhhH
Q 005248 152 KNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRR--------------AQF-EQLEYTDDEYQKELQHI 216 (706)
Q Consensus 152 ~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~--------------k~F-~~~~YtdeeY~~El~~I 216 (706)
.+...+.|. ++++=++-..+.+......-..--+-|-.+-... ..| ...+.|.+ |++.+
T Consensus 91 ~~avh~~G~--~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~----eI~~~ 164 (377)
T 2r14_A 91 VEAVHAKGG--RIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETD----EIPGI 164 (377)
T ss_dssp HHHHHHTTC--CEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGG----GHHHH
T ss_pred HHHHhhcCC--eEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHH----HHHHH
Confidence 888888775 5555554333332110000000012222221100 001 22344544 66777
Q ss_pred HhhHHHHHHHHHHcCC-eEEEecCCCCCchhHH--------HhhCCChHHHHHHHHHHHHHHHH-CCCCcEEEEEecCCh
Q 005248 217 EEVFSPLVEKCKKYGR-AVRIGTNHGSLSDRIM--------SYYGDSPRGMVESAFEFARICRK-LDFHNFLFSMKASNP 286 (706)
Q Consensus 217 ~~~f~~vv~~ake~~~-~IRIGvN~GSL~~~il--------~rygdt~eamVeSAle~~~i~e~-~~f~~iviS~KaSnv 286 (706)
-+.|..-.+.|++.|. .|-|=.-||-|=+.+| .+||.+.+.=..-++|-++-+++ .|-+ .|++|-|-.
T Consensus 165 i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~--~v~vrls~~ 242 (377)
T 2r14_A 165 VEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE--RVGIRLTPF 242 (377)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG--GEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC--cEEEEeccc
Confidence 7888888888888885 4777666787755555 35775555444455555553333 4433 567775521
Q ss_pred --------hHHHHHHHHHHHhhhcCCCCCcccc
Q 005248 287 --------VVMVQAYRLLVAEMYVHGWDYPLHL 311 (706)
Q Consensus 287 --------~~~i~ayrlla~~~~~eg~~YPLHL 311 (706)
....+-+..|++++++.|.|| ||+
T Consensus 243 ~~~~~~~~~~~~~~~~~la~~le~~Gvd~-i~v 274 (377)
T 2r14_A 243 LELFGLTDDEPEAMAFYLAGELDRRGLAY-LHF 274 (377)
T ss_dssp CCCTTCCCSCHHHHHHHHHHHHHHTTCSE-EEE
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHcCCCE-EEE
Confidence 124456677888888889887 665
No 288
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=66.02 E-value=12 Score=40.21 Aligned_cols=85 Identities=12% Similarity=0.271 Sum_probs=57.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--------------------------HHHHHHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--------------------------KREADACFEI 151 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~--------------------------~~~A~al~~I 151 (706)
+||..+=+|...++..-.|.+..++++.++.+.|...+.+-+-. .++.+.++.|
T Consensus 136 LGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~av 215 (422)
T 3tji_A 136 FGGKSRDAIPAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHAL 215 (422)
T ss_dssp TTCCSSSCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCeEEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHH
Confidence 56643222222333334678999999999999999999987621 2456667777
Q ss_pred HHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 152 KNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 152 ~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
|+. -|-++||..|.| |++.-|+..++.+++.
T Consensus 216 R~a---vG~d~~L~vDaN~~~~~~~A~~~~~~Le~~ 248 (422)
T 3tji_A 216 REK---YGWKLHILHDVHERLFPQQAVQLAKQLEPF 248 (422)
T ss_dssp HHH---HCSSSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred HHH---cCCCCEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 774 356899999998 5566666666666654
No 289
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=65.72 E-value=22 Score=38.61 Aligned_cols=99 Identities=13% Similarity=0.074 Sum_probs=74.4
Q ss_pred CHHHHHHHHHHHH-HcCCCEEEEecC-CHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhh--hcCceeeCC
Q 005248 116 DVAGTVEEVMRIA-DQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAE--CFDKIRVNP 189 (706)
Q Consensus 116 Dv~atv~Qi~~L~-~aGceiVRvtv~-~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~--~~~kiRINP 189 (706)
+.+..++.+.++. +.+ |+=|-=| ..++-+.+++++++ .++||++|=- +|++-+..+++ +++-|.|.|
T Consensus 274 t~~eai~~~~~~l~~y~--i~~iEdPl~~dD~~g~~~l~~~-----~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv 346 (436)
T 2al1_A 274 TGPQLADLYHSLMKRYP--IVSIEDPFAEDDWEAWSHFFKT-----AGIQIVADDLTVTNPKRIATAIEKKAADALLLKV 346 (436)
T ss_dssp CHHHHHHHHHHHHHHSC--EEEEECCSCTTCHHHHHHHHTT-----CCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH
T ss_pred CHHHHHHHHHHHHHhCC--cEEEECCCCCcCHHHHHHHHhc-----CCCeEEECCcccCCHHHHHHHHHhCCCCEEEech
Confidence 4566666766654 454 6666655 45678888888875 7899999965 47888888877 499999999
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCC
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL 243 (706)
..+|.-. ...++++.|+++|+.+=+|-.+|.-
T Consensus 347 ~qiGGit----------------------ea~~ia~lA~~~g~~~~~sh~sgEt 378 (436)
T 2al1_A 347 NQIGTLS----------------------ESIKAAQDSFAAGWGVMVSHRSGET 378 (436)
T ss_dssp HHHCCHH----------------------HHHHHHHHHHHTTCEEEEECCSBCC
T ss_pred hhcCCHH----------------------HHHHHHHHHHHcCCeEEEecCCCch
Confidence 9998833 4567999999999998777655544
No 290
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=65.66 E-value=3.6 Score=39.86 Aligned_cols=96 Identities=16% Similarity=0.173 Sum_probs=61.1
Q ss_pred HHHHHHHHcCCCEEEEecCCHH-HHHHHHHHHHhhccCCcCcceee-------ccCC--CHHHHHHHhh-h-cCceeeCC
Q 005248 122 EEVMRIADQGADLVRITVQGKR-EADACFEIKNSLVQKNYNIPLVA-------DIHF--APSVALRVAE-C-FDKIRVNP 189 (706)
Q Consensus 122 ~Qi~~L~~aGceiVRvtv~~~~-~A~al~~I~~~L~~~g~~iPLVA-------DIHF--~~~~Al~a~~-~-~~kiRINP 189 (706)
+.+..++++|++-|=+...-.. .. .+.++++.|++.|..+..++ |-.+ ..+.+++.++ . +..|++.|
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCCEEEEec
Confidence 3566678889999877632110 01 56778888888888764332 1123 1234444444 3 89999999
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CCCC
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGS 242 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~GS 242 (706)
|.+... +.+..+.+.|+++|+ +|++ ||+.
T Consensus 106 g~~~~~----------------------~~l~~l~~~a~~~Gv--~l~lEn~~~ 135 (264)
T 1yx1_A 106 GLLPEQ----------------------PDLAALGRRLARHGL--QLLVENDQT 135 (264)
T ss_dssp ECCCSS----------------------CCHHHHHHHHTTSSC--EEEEECCSS
T ss_pred CCCCcH----------------------HHHHHHHHHHHhcCC--EEEEecCCC
Confidence 876431 167889999999986 5676 7754
No 291
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=65.47 E-value=10 Score=39.32 Aligned_cols=112 Identities=17% Similarity=0.212 Sum_probs=72.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (706)
+|.+..++|=- |.. -|.+..++-+++|.+.+-+.+===++ .++-+.+.+++++ +++|+.+|=++. ..-+.
T Consensus 185 ~g~~~~l~vDa--N~~-~~~~~A~~~~~~l~~~~~~~iEeP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 255 (370)
T 2chr_A 185 LGSKAYLRVDV--NQA-WDEQVASVYIPELEALGVELIEQPVG-RENTQALRRLSDN-----NRVAIMADESLSTLASAF 255 (370)
T ss_dssp TTTTSEEEEEC--TTC-CCTHHHHHHHHHHHTTTCCEEECCSC-SSCHHHHHHHHHH-----CSSEEEESSSCCSHHHHH
T ss_pred cCCCcEEEecC--CCC-CCHHHHHHHHHHHHhcCCceecCCCC-hhhhhhhhHHhhh-----ccCCccCCccCCCHHHHH
Confidence 45555555532 211 24555566666677766665432222 2345667778875 889999997654 44444
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
..++ ++|=+++.|...|.-. ...++...|+++|+++=+|-++
T Consensus 256 ~~~~~~a~d~i~~d~~~~GGit----------------------~~~~ia~~A~~~gi~~~~~~~~ 299 (370)
T 2chr_A 256 DLARDRSVDVFSLKLCNMGGVS----------------------ATQKIAAVAEASGIASYGGTML 299 (370)
T ss_dssp HHHTTTCCSEECCCHHHHTSHH----------------------HHHHHHHHHHHHTCEECCCCCS
T ss_pred HHHHcCCCcEEEeCCcccCCHH----------------------HHHHHHHHHHHcCCeEEeCCCc
Confidence 4544 4899999999998733 5678999999999987555433
No 292
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=65.37 E-value=15 Score=39.18 Aligned_cols=85 Identities=15% Similarity=0.261 Sum_probs=59.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--------------------------HHHHHHHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--------------------------KREADACFEI 151 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~--------------------------~~~A~al~~I 151 (706)
+||...=+|...++....+.+..++++.++.+.|...+++-+-. .++.+.++.|
T Consensus 135 LGG~~r~~v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~av 214 (421)
T 4hnl_A 135 LGGKARTAIPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAI 214 (421)
T ss_dssp TTCCSSSCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHH
T ss_pred cCCccCcccceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHH
Confidence 46654333333444444578899999999999999999987632 3566777778
Q ss_pred HHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 152 KNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 152 ~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
|+. -|-+++|..|.| |++.-|+..++.++++
T Consensus 215 R~a---~G~~~~l~vDan~~~~~~~A~~~~~~l~~~ 247 (421)
T 4hnl_A 215 KEK---YGNQFQMLHDVHERLHPNQAIQFAKAAEPY 247 (421)
T ss_dssp HHH---HTTSSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred HHH---hCCCceEeccccccCCHHHHHHHHHHhhhh
Confidence 775 367899999987 4566666666666665
No 293
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=65.32 E-value=20 Score=34.55 Aligned_cols=94 Identities=13% Similarity=0.115 Sum_probs=61.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCH--HHHHHHHHHHHhhccCCcCcceeeccCCC--H-HHHHHHhhh-cCce
Q 005248 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGK--READACFEIKNSLVQKNYNIPLVADIHFA--P-SVALRVAEC-FDKI 185 (706)
Q Consensus 112 t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~--~~A~al~~I~~~L~~~g~~iPLVADIHF~--~-~~Al~a~~~-~~ki 185 (706)
-|..|.+.+++.++++ +.|++++=+..+-. .--+.++.||+. -.+.|++.|.|+. | ..+..++++ ++-|
T Consensus 13 lD~~~~~~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~----~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i 87 (218)
T 3jr2_A 13 LDQTNLTDAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHN----HPNHILVCDMKTTDGGAILSRMAFEAGADWI 87 (218)
T ss_dssp ECCSSHHHHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHH----CTTSEEEEEEEECSCHHHHHHHHHHHTCSEE
T ss_pred eCCCCHHHHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHh----CCCCcEEEEEeecccHHHHHHHHHhcCCCEE
Confidence 4788999999999996 67999999985421 122344555542 2357999999985 3 345566665 6655
Q ss_pred eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 186 RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
=+-. .-+ ++.+.++++.|+++|+..
T Consensus 88 ~vh~-~~~-----------------------~~~~~~~~~~~~~~g~~~ 112 (218)
T 3jr2_A 88 TVSA-AAH-----------------------IATIAACKKVADELNGEI 112 (218)
T ss_dssp EEET-TSC-----------------------HHHHHHHHHHHHHHTCEE
T ss_pred EEec-CCC-----------------------HHHHHHHHHHHHHhCCcc
Confidence 4422 111 123567889999999865
No 294
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=65.18 E-value=13 Score=37.95 Aligned_cols=48 Identities=15% Similarity=0.196 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHcCCCEEEEec--CCHHHHHHHHHHHHhhccCCcCcceee
Q 005248 119 GTVEEVMRIADQGADLVRITV--QGKREADACFEIKNSLVQKNYNIPLVA 166 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRvtv--~~~~~A~al~~I~~~L~~~g~~iPLVA 166 (706)
...+...++.+.|||||+|++ ++.++.-.|-+...+.++...+.|+||
T Consensus 160 el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa 209 (259)
T 3l9c_A 160 NLMEVFSELTALAPRVVKIAVMPKNEQDVLDLMNYTRGFKTLNPNQEYVT 209 (259)
T ss_dssp THHHHHHHHHHTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHHHhccCCCCEEE
Confidence 355667778889999999986 556777777777766554445688875
No 295
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=65.16 E-value=22 Score=37.36 Aligned_cols=69 Identities=14% Similarity=0.241 Sum_probs=52.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCcee
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiR 186 (706)
.+.+..++++.++.++|.+.+.+-+-. ..+.+.++.||+.+ |-++||..|.| |+..-|+..++.+++..
T Consensus 164 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDan~~~~~~~a~~~~~~l~~~~ 237 (392)
T 1tzz_A 164 KGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI---GKDAQLAVDANGRFNLETGIAYAKMLRDYP 237 (392)
T ss_dssp -CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH---TTTCEEEEECTTCCCHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc---CCCCeEEEECCCCCCHHHHHHHHHHHHHcC
Confidence 378999999999999999999987654 35667888888753 56899999988 45555656666666653
No 296
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=64.41 E-value=17 Score=39.35 Aligned_cols=62 Identities=19% Similarity=0.337 Sum_probs=47.8
Q ss_pred HHHHHHHHHcCCCEEEE-ecC--CHHHHHHHHHHHHhhccCCcCcceee-ccCCCHHHHHHHhhh-cCceeeC
Q 005248 121 VEEVMRIADQGADLVRI-TVQ--GKREADACFEIKNSLVQKNYNIPLVA-DIHFAPSVALRVAEC-FDKIRVN 188 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRv-tv~--~~~~A~al~~I~~~L~~~g~~iPLVA-DIHF~~~~Al~a~~~-~~kiRIN 188 (706)
.+++..|.++|+++|=+ +.. +....+.++.|++. +++|+++ .+ -++..|..++++ +|-|-+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~-----~~i~Vi~g~V-~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-----MNIDVIVGNV-VTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTT-----CCCEEEEEEE-CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhc-----CCCeEEEeec-CCHHHHHHHHHcCCCEEEEe
Confidence 68899999999999966 222 23446777777774 5799986 66 468999999887 9999985
No 297
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=64.40 E-value=1.4e+02 Score=31.37 Aligned_cols=196 Identities=16% Similarity=0.122 Sum_probs=111.9
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcCCC-EEEEecCCH-HHHHHHHHHHHhhccCCcCcceeec--cC---CCHH-------
Q 005248 108 TMTTNDTKDVAGTVEEVMRIADQGAD-LVRITVQGK-READACFEIKNSLVQKNYNIPLVAD--IH---FAPS------- 173 (706)
Q Consensus 108 SMt~t~T~Dv~atv~Qi~~L~~aGce-iVRvtv~~~-~~A~al~~I~~~L~~~g~~iPLVAD--IH---F~~~------- 173 (706)
+..|..-.|.+.+++.+.++.++|.. ||=+++.+. +..+.+.+|.++ +.+.+++= +| |.|.
T Consensus 76 ~~~~~~l~~~~~~~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~-----~gv~i~~~tG~y~~~~~P~~~~~~~~ 150 (364)
T 3k2g_A 76 NKHNIALDDLDLAIAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAE-----TGVQVVMGAGYYLASSMPETAARLSA 150 (364)
T ss_dssp CTTTSEECCHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHH-----HCCEEEECCSBCCGGGCCGGGGTCCH
T ss_pred CccccccccHHHHHHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHH-----hCCcEEEEeCccCCCCCchhhccCCH
Confidence 33555678999999999999999986 555554333 677777777775 44444443 34 1122
Q ss_pred --HHHHHhh----hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC-CCCCchh
Q 005248 174 --VALRVAE----CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN-HGSLSDR 246 (706)
Q Consensus 174 --~Al~a~~----~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN-~GSL~~~ 246 (706)
++...++ .++.-++.+|-||.-.-.| .+|+ .=++.|+.-++.|++.|+||=|=+. .|
T Consensus 151 ~~L~~~~~~ei~~Gi~~~~vkag~IGEiGld~---~~t~--------~q~~~f~aq~~~A~~~glPV~iH~~gr~----- 214 (364)
T 3k2g_A 151 DDIADEIVAEALEGTDGTDARIGLIGEIGVSS---DFTA--------EEEKSLRGAARAQVRTGLPLMVHLPGWF----- 214 (364)
T ss_dssp HHHHHHHHHHHHTCBTTBSCCCSSEEEEECCT---TCCH--------HHHHHHHHHHHHHHHHCCCEEEECCTTS-----
T ss_pred HHHHHHHHHHHHhccccCCcceeEEEEEEcCC---CCCH--------HHHHHHHHHHHHHHHHCCeEEEecCCCC-----
Confidence 2211111 2344556688776311001 1121 1144678889999999999866542 11
Q ss_pred HHHhhCCChHHHHHHHHHHHHHHHHCCCC--cEEE-EEe-cC-ChhHHHHHHHHHHHhhhcCCCCCcccccccccCCC--
Q 005248 247 IMSYYGDSPRGMVESAFEFARICRKLDFH--NFLF-SMK-AS-NPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG-- 319 (706)
Q Consensus 247 il~rygdt~eamVeSAle~~~i~e~~~f~--~ivi-S~K-aS-nv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~g-- 319 (706)
+++.+.++++++.|.. .+++ =|= +. | .+..+.++++ | .+||+|=.|+-
T Consensus 215 -------------~a~~e~l~iL~e~g~~~~~vvi~H~~~s~~~----~e~a~~~l~~----G----~~I~f~g~gt~~~ 269 (364)
T 3k2g_A 215 -------------RLAHRVLDLVEEEGADLRHTVLCHMNPSHMD----PVYQATLAQR----G----AFLEFDMIGMDFF 269 (364)
T ss_dssp -------------CCHHHHHHHHHHTTCCGGGEEECCCGGGTTC----HHHHHHHHHH----T----CEEEECCTTCCCE
T ss_pred -------------ccHHHHHHHHHHcCCCCCceEEECCCCCCCC----HHHHHHHHhC----C----cEEEecCCccccc
Confidence 1246677889988875 4444 222 12 2 2223333433 2 45666622221
Q ss_pred -------CCCchhhHHHHHHHhhcCCCceeEEecCCCC
Q 005248 320 -------EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPP 350 (706)
Q Consensus 320 -------~~G~IKSavGiG~LL~dGIGDTIRVSLT~dP 350 (706)
...--|.+-.|-.++.+|-.|-|-+| |+-|
T Consensus 270 f~~~~~~~~~d~~ra~~l~~lv~~gp~drille-TD~p 306 (364)
T 3k2g_A 270 YADQGVQCPSDDEVARAILGLADHGYLDRILLS-HDVF 306 (364)
T ss_dssp ETTTTEECCCHHHHHHHHHHHHHTTCGGGEEEC-CCCC
T ss_pred ccccccccccHHHHHHHHHHHHHhCCcccEEEe-CCCC
Confidence 01123667778888888888887777 4444
No 298
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=64.33 E-value=45 Score=32.86 Aligned_cols=123 Identities=12% Similarity=0.102 Sum_probs=66.1
Q ss_pred HHHHHHHHcCCCEEEEecCCHH-------HHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCc
Q 005248 122 EEVMRIADQGADLVRITVQGKR-------EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194 (706)
Q Consensus 122 ~Qi~~L~~aGceiVRvtv~~~~-------~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~ 194 (706)
+.+..++++|++-|-+...+.. ..+.+.++++.|.+.|+. ++. +|-.+ .+|+++-
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~--~h~~~-------------~~nl~s~-- 83 (303)
T 3aal_A 22 AASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIE-EIV--VHAPY-------------IINIGNT-- 83 (303)
T ss_dssp HHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCC-EEE--EECCT-------------TCCTTCS--
T ss_pred HHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCc-eEE--Eeccc-------------cccCCCC--
Confidence 3455667889999999543321 123455666666666662 222 23211 2344331
Q ss_pred chhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCC
Q 005248 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDF 274 (706)
Q Consensus 195 ~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f 274 (706)
+ |.+..++-.+.++..++.|++.|.+. |-+..|+.. +...+.-.+.+.+.++.+-+.-
T Consensus 84 -d------------~~~~r~~~~~~~~~~i~~A~~lGa~~-vv~h~g~~~-------~~~~~~~~~~~~~~l~~l~~~a- 141 (303)
T 3aal_A 84 -T------------NLDTFSLGVDFLRAEIERTEAIGAKQ-LVLHPGAHV-------GAGVEAGLRQIIRGLNEVLTRE- 141 (303)
T ss_dssp -S------------CHHHHHHHHHHHHHHHHHHHHHTCSE-EEECCEECT-------TSCHHHHHHHHHHHHHHHCCSS-
T ss_pred -C------------cHHHHHHHHHHHHHHHHHHHHcCCCE-EEECCCcCC-------CCCHHHHHHHHHHHHHHHHHhC-
Confidence 1 11123344556777899999999874 445556542 2233444455555555444443
Q ss_pred CcEEEEEecC
Q 005248 275 HNFLFSMKAS 284 (706)
Q Consensus 275 ~~iviS~KaS 284 (706)
+.+.|.+-..
T Consensus 142 ~gv~l~lEn~ 151 (303)
T 3aal_A 142 QNVQIALETM 151 (303)
T ss_dssp CSCEEEEECC
T ss_pred CCCEEEEecC
Confidence 5677777654
No 299
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=64.03 E-value=16 Score=37.65 Aligned_cols=68 Identities=12% Similarity=0.244 Sum_probs=50.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC--C-HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQ--G-KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~--~-~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
.|.+..++++.++.++|.+.|.+-+- + ..+.+.+..||+.+ |-++||..|.| |+..-|+..++.+++.
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 215 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV---GDDFGIMVDYNQSLDVPAAIKRSQALQQE 215 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH---CSSSEEEEECTTCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh---CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 46788889999999999999999874 3 34567788888753 56899999988 5555555555555544
No 300
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=63.83 E-value=12 Score=37.57 Aligned_cols=62 Identities=18% Similarity=0.212 Sum_probs=43.2
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeC
Q 005248 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVN 188 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRIN 188 (706)
.+++..+.++|++.|=.+ .. ..++.+.+.+++.+..+|+++|+| ++.-+..+++. ++-|-+|
T Consensus 90 ~~~~~~~~~aGad~v~~~-~~----~~~~~~~~~~~~~~~~i~l~~~v~-~~~~~~~a~~~Gad~I~v~ 152 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDES-EV----LTPADEEHHIDKWKFKVPFVCGAR-NLGEALRRIAEGAAMIRTK 152 (297)
T ss_dssp HHHHHHHHHTTCSEEEEE-TT----SCCSCSSCCCCGGGCSSCEEEEES-SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEeee-CC----CChHHHHHHHHHhCCCceEEeecC-CHHHHHHHHHcCCCEEEEc
Confidence 678889999999999322 21 122344444555456899999988 66677777776 8888887
No 301
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=63.54 E-value=18 Score=37.69 Aligned_cols=104 Identities=12% Similarity=0.081 Sum_probs=56.5
Q ss_pred HHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccc
Q 005248 126 RIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205 (706)
Q Consensus 126 ~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~Yt 205 (706)
.|.++||+ .+.|.+.+||..+. +.|++-|++-=-|..+.-+..++++ .+. + ++-+.
T Consensus 52 ~l~~~G~~--~f~vas~~Ea~~~~-------~~G~~~~il~~~~~~~~~~~~~~~~--~i~--~-~vds~---------- 107 (386)
T 1vfs_A 52 AAQEAGAA--WLGTATPEEALELR-------AAGIQGRIMCWLWTPGGPWREAIET--DID--V-SVSGM---------- 107 (386)
T ss_dssp HHHHHTCC--EEEESSHHHHHHHH-------HTTCCSEEEECCCCTTCCHHHHHHT--TCE--E-EECSH----------
T ss_pred HHHHCCCC--EEEEeeHHHHHHHH-------hcCCCCCEEEECCCCHHHHHHHHHc--CCE--E-EECCH----------
Confidence 36688974 58888988887654 2377655552112222222233332 222 2 33221
Q ss_pred hHHHHHHHhhHHhhHHHHHHHHHHcCC--eEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHC
Q 005248 206 DDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272 (706)
Q Consensus 206 deeY~~El~~I~~~f~~vv~~ake~~~--~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~ 272 (706)
+.++.+-+.|++.+. +|.|=||.| |+|+|-.++.+ +.+++.++.+.++
T Consensus 108 ------------~~l~~l~~~a~~~~~~~~V~l~vdtG------~~R~G~~~~e~-~~~~~~~~~i~~~ 157 (386)
T 1vfs_A 108 ------------WALDEVRAAARAAGRTARIQLKADTG------LGRNGCQPADW-AELVGAAVAAQAE 157 (386)
T ss_dssp ------------HHHHHHHHHHHHHTSCEEEEEEBCSS------CCSSSBCHHHH-HHHHHHHHHHHHT
T ss_pred ------------HHHHHHHHHHHhcCCceEEEEEEcCC------CCCCCCCHhHH-HHHHHHHHHHHhC
Confidence 123344455665554 577788988 47899666543 3455556666654
No 302
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=63.54 E-value=18 Score=38.45 Aligned_cols=85 Identities=14% Similarity=0.162 Sum_probs=58.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCC-cCcceeeccCC--C
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKN-YNIPLVADIHF--A 171 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g-~~iPLVADIHF--~ 171 (706)
+||..+=.|..-.+..-.|.+..++++.++.+.|...+.+-+-. .++.+.++.||+.+ | -+++|..|.|- +
T Consensus 146 LGg~~r~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~---gg~~~~L~vDaN~~w~ 222 (391)
T 4e8g_A 146 LGGVAAERVPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERI---RGTGTRLAVDGNRSLP 222 (391)
T ss_dssp TTCCSCSEEECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHH---TTTTCEEEEECTTCCC
T ss_pred cCCCCCCcEEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHh---CCCCCeEEEeCCCCCC
Confidence 45543333333333334578999999999999999999998754 36677777777643 4 67999999885 4
Q ss_pred HHHHHHHhhhcCce
Q 005248 172 PSVALRVAECFDKI 185 (706)
Q Consensus 172 ~~~Al~a~~~~~ki 185 (706)
+.-|+..++.++.+
T Consensus 223 ~~~A~~~~~~L~~~ 236 (391)
T 4e8g_A 223 SRDALRLSRECPEI 236 (391)
T ss_dssp HHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHhhc
Confidence 55555556666654
No 303
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=63.43 E-value=11 Score=39.33 Aligned_cols=80 Identities=23% Similarity=0.236 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHH
Q 005248 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSP 222 (706)
Q Consensus 144 ~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~ 222 (706)
..+.|+.+.++|++.|+.+-|--| =++.....|.+. ++.|=+--|.|++. |++++-++||++|.+
T Consensus 140 ~~~~L~~~i~~L~~~GIrVSLFID--pd~~qI~aA~~~GAd~IELhTG~YA~a--------~~~~~~~~el~rl~~---- 205 (278)
T 3gk0_A 140 HFDAVRAACKQLADAGVRVSLFID--PDEAQIRAAHETGAPVIELHTGRYADA--------HDAAEQQREFERIAT---- 205 (278)
T ss_dssp THHHHHHHHHHHHHTTCEEEEEEC--SCHHHHHHHHHHTCSEEEECCHHHHTC--------SSHHHHHHHHHHHHH----
T ss_pred cHHHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHhCcCEEEEecchhhcc--------CCchhHHHHHHHHHH----
Confidence 467788888899999999999887 344444455565 99999999998762 345567778887776
Q ss_pred HHHHHHHcCCeEEEecCCC
Q 005248 223 LVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 223 vv~~ake~~~~IRIGvN~G 241 (706)
-.+.|.+.|. |||.|
T Consensus 206 aA~~A~~lGL----~VnAG 220 (278)
T 3gk0_A 206 GVDAGIALGL----KVNAG 220 (278)
T ss_dssp HHHHHHHTTC----EEEEC
T ss_pred HHHHHHHcCC----EEecC
Confidence 7788899886 66766
No 304
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=63.36 E-value=15 Score=38.87 Aligned_cols=66 Identities=18% Similarity=0.107 Sum_probs=47.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC-----C--HHHHHHHHHHHHhhccCCcCcceeeccCCCH--HHHHHHhhhc
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQ-----G--KREADACFEIKNSLVQKNYNIPLVADIHFAP--SVALRVAECF 182 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~-----~--~~~A~al~~I~~~L~~~g~~iPLVADIHF~~--~~Al~a~~~~ 182 (706)
..|.+..++++.++.+.|...+.+-+- . .++.+.++.||+. -|-+++|..|.|-.+ .-|+..++.+
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a---~G~~~~L~vDaN~~~~~~~A~~~~~~l 217 (386)
T 3fv9_G 143 GDTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLAD---RQPGEWYLADANNGLTVEHALRMLSLL 217 (386)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTT---CCTTCEEEEECTTCCCHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHH---cCCCCeEEEECCCCCCHHHHHHHHHHh
Confidence 457899999999999999999999875 1 3445555555542 367899999998554 4455555555
No 305
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=62.90 E-value=13 Score=38.96 Aligned_cols=68 Identities=9% Similarity=0.025 Sum_probs=48.4
Q ss_pred HHHHHHHHHhhccCCcCcceeeccCCC--HHH-HHHHh--hhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhh
Q 005248 145 ADACFEIKNSLVQKNYNIPLVADIHFA--PSV-ALRVA--ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEV 219 (706)
Q Consensus 145 A~al~~I~~~L~~~g~~iPLVADIHF~--~~~-Al~a~--~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~ 219 (706)
-+.+.+++++ +++||++|=.+. ... +..++ .+++-|.|.|..+|.-. .
T Consensus 248 ~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit----------------------~ 300 (377)
T 2pge_A 248 WSEMAALCAN-----SPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLGGFH----------------------Y 300 (377)
T ss_dssp HHHHHHHHHH-----CSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHTSHH----------------------H
T ss_pred HHHHHHHHhh-----CCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcCCHH----------------------H
Confidence 4455566654 689999995542 222 23444 35999999999998743 5
Q ss_pred HHHHHHHHHHcCCeEEEecC
Q 005248 220 FSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 220 f~~vv~~ake~~~~IRIGvN 239 (706)
..++++.|+++|+++=+|-.
T Consensus 301 ~~~i~~~A~~~g~~~~~~~~ 320 (377)
T 2pge_A 301 AGQWIELARERGIGFWITSA 320 (377)
T ss_dssp HHHHHHHHHHTTCEEEEBCC
T ss_pred HHHHHHHHHHCCCeEEecCC
Confidence 67799999999999977754
No 306
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=62.64 E-value=19 Score=39.40 Aligned_cols=48 Identities=27% Similarity=0.416 Sum_probs=37.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceee
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVA 166 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVA 166 (706)
|-+.+...+.+.++.+.||||||+++. +.++...|-+...+ .++|+||
T Consensus 130 tp~~~~~~~~~~~~~~~gaDivKia~~a~~~~D~~~l~~~~~~-----~~~p~i~ 179 (523)
T 2o7s_A 130 TPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSK-----AQVPTIG 179 (523)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEEECSSGGGHHHHHHHHHH-----CSSCEEE
T ss_pred CcCHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHHHHHhh-----cCCCEEE
Confidence 446678888889999999999999964 55677777776664 4689877
No 307
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=62.60 E-value=12 Score=39.73 Aligned_cols=95 Identities=9% Similarity=0.085 Sum_probs=62.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNF 192 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNi 192 (706)
|.+..++-+++|++.+...+===+| .++.+.++++++ .+++||.+|=++ ++.-+...++ ++|-|.|.+..+
T Consensus 233 ~~~~A~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~-----~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~ 306 (421)
T 4hnl_A 233 HPNQAIQFAKAAEPYQLFFLEDILP-PDQSHWLTQLRS-----QSATPIATGELFNNPMEWQELVKNRQIDFMRAHVSQI 306 (421)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSC-GGGGGGHHHHHT-----TCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGG
T ss_pred CHHHHHHHHHHhhhhhhcccccCCc-ccchHHHHHHHh-----cCCCCeecCcceehhHHHHHHHhcCCceEEEeCCCCC
Confidence 4455555555555555544321121 234555666666 478999999654 4444445554 489999999999
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
|.-. ...++++.|+++|+++=++.
T Consensus 307 GGit----------------------e~~~ia~~A~~~gi~v~~h~ 330 (421)
T 4hnl_A 307 GGIT----------------------PALKLAHFCDAMGVRIAWHT 330 (421)
T ss_dssp TSHH----------------------HHHHHHHHHHHTTCEECCCC
T ss_pred CCHH----------------------HHHHHHHHHHHCCCeEEEeC
Confidence 8733 56789999999999985554
No 308
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=62.36 E-value=19 Score=38.91 Aligned_cols=83 Identities=18% Similarity=0.338 Sum_probs=58.3
Q ss_pred cCCCC--ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC--C--------------------------------
Q 005248 98 IGSEH--PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ--G-------------------------------- 141 (706)
Q Consensus 98 IGG~~--PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~--~-------------------------------- 141 (706)
+||.. .|.+ -+++...+.+..++++.++.+.|...+.+-+- +
T Consensus 137 LGG~~r~~v~~--y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (440)
T 3t6c_A 137 LGGKCRDGIAL--YVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPG 214 (440)
T ss_dssp TTCCSCSSEEE--EEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSS
T ss_pred cCCCCCCeeEE--EEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccccccccccccccc
Confidence 56643 4444 32344567899999999999999999998752 1
Q ss_pred ---------HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 142 ---------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 142 ---------~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
.++.+.++.||+. -|-++||..|.| |++.-|+..++.++..
T Consensus 215 ~~~~~~~~~~~d~~~v~avR~a---~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~ 266 (440)
T 3t6c_A 215 IYFDPEAYAKSIPRLFDHLRNK---LGFSVELLHDAHERITPINAIHMAKALEPY 266 (440)
T ss_dssp EECCHHHHHHHHHHHHHHHHHH---HCSSSEEEEECTTCSCHHHHHHHHHHTGGG
T ss_pred ccccchhhHHHHHHHHHHHHHh---cCCCCeEEEECCCCCCHHHHHHHHHHhhhc
Confidence 2456667777774 356899999998 5566666666666654
No 309
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=62.16 E-value=1.3e+02 Score=30.36 Aligned_cols=134 Identities=13% Similarity=0.158 Sum_probs=75.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHHH-------HHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCcee
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQGKRE-------ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIR 186 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~-------A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiR 186 (706)
.++++..+++++.|.+.|..-|.++-++.-. ...+.++-+.|.+. | .+..+|
T Consensus 32 ~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~----~-----------------gi~~ir 90 (304)
T 2qgq_A 32 SRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSL----N-----------------GEFWIR 90 (304)
T ss_dssp BCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTS----S-----------------SSCEEE
T ss_pred eeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhc----C-----------------CCcEEE
Confidence 4578999999999999999988887654321 12233333322211 0 123455
Q ss_pred e---CCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC-eEEEecCCCCCchhHHHhhCC--ChHHHHH
Q 005248 187 V---NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR-AVRIGTNHGSLSDRIMSYYGD--SPRGMVE 260 (706)
Q Consensus 187 I---NPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~-~IRIGvN~GSL~~~il~rygd--t~eamVe 260 (706)
+ ||..+- .++++..++.|. .-+|-+.-=|.+++++++++. +. +
T Consensus 91 ~~~~~p~~l~---------------------------~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~----e 139 (304)
T 2qgq_A 91 VMYLHPDHLT---------------------------EEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSS----E 139 (304)
T ss_dssp ECCCCGGGCC---------------------------HHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCH----H
T ss_pred EeeeecccCC---------------------------HHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCCCCH----H
Confidence 3 666551 135666667772 234444444556889988763 43 4
Q ss_pred HHHHHHHHHHH--CCC---CcEEEEEecCChhHHHHHHHHHHHh
Q 005248 261 SAFEFARICRK--LDF---HNFLFSMKASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 261 SAle~~~i~e~--~~f---~~iviS~KaSnv~~~i~ayrlla~~ 299 (706)
..++.++.+.+ .|+ -++++-+---+..+..+..+++.+.
T Consensus 140 ~~~~~i~~l~~~~~gi~i~~~~IvG~PgEt~ed~~~t~~~l~~l 183 (304)
T 2qgq_A 140 ELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEI 183 (304)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHc
Confidence 45556666666 444 2444444344556666666665543
No 310
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=62.05 E-value=22 Score=37.23 Aligned_cols=69 Identities=16% Similarity=0.211 Sum_probs=50.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCcee
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiR 186 (706)
.|.+..++++.++.++|.+.|.+-+-. .+..+.+..||+.+ |-++||..|.| |+..-|++.++.+++..
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avr~a~---g~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 235 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPVADDGPAAEIANLRQVL---GPQAKIAADMHWNQTPERALELIAEMQPFD 235 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH---CTTSEEEEECCSCSCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCCCChHHHHHHHHHHHHh---CCCCEEEEECCCCCCHHHHHHHHHHHhhcC
Confidence 488999999999999999999987642 22267777777753 56899999988 55555555555566543
No 311
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=61.93 E-value=1.5e+02 Score=30.55 Aligned_cols=65 Identities=15% Similarity=0.283 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
|.+..++++.++.++|...+.+-+.-.++.+.++.||+.+ -+++|..|.| |+..- +..++.+++.
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v~avr~a~----~~~~l~vDan~~~~~~~-~~~~~~l~~~ 207 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKIKPGWDYEVLKAVREAF----PEATLTADANSAYSLAN-LAQLKRLDEL 207 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHHHHHHHHC----TTSCEEEECTTCCCGGG-HHHHHGGGGG
T ss_pred CHHHHHHHHHHHHHhhhheeeeecChhHHHHHHHHHHHHc----CCCeEEEecCCCCCHHH-HHHHHHHHhC
Confidence 7888899999999999999998874355677889998874 3688999987 45444 4445555554
No 312
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=61.80 E-value=1.4e+02 Score=30.06 Aligned_cols=138 Identities=14% Similarity=0.080 Sum_probs=70.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC-HHH-HHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG-KRE-ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~-~~~-A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGN 191 (706)
.+.+.-++++.++.+.|..-|-++--. ..- .+.+.+|.+.+++.++.+-+-.. ..++..+..-.++ ++.+-++.-.
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g-~l~~e~l~~L~~ag~~~v~i~let 162 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLG-EWPREYYEKWKEAGADRYLLRHET 162 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECC-CCCHHHHHHHHHHTCCEEECCCBC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecC-CCCHHHHHHHHHhCCCEEeeeeee
Confidence 467888999999999999988887433 111 14555555555555433322111 2344544444443 5444332211
Q ss_pred CCcchhhccccccchHHHHHHHhh--HHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHH
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQH--IEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARIC 269 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~--I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~ 269 (706)
. +++-| +.+.+ --+++.+.++.+++.|+.+.+++--|.- |+|.+.+. +.++.+
T Consensus 163 ~------------~~~~~-~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p--------~et~e~~~----~~~~~l 217 (348)
T 3iix_A 163 A------------NPVLH-RKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLP--------GQTIDDLV----DDLLFL 217 (348)
T ss_dssp S------------CHHHH-HHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCT--------TCCHHHHH----HHHHHH
T ss_pred C------------CHHHH-HHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCC--------CCCHHHHH----HHHHHH
Confidence 1 11112 12211 2234555667777778777666644431 34554443 344555
Q ss_pred HHCCCCcEE
Q 005248 270 RKLDFHNFL 278 (706)
Q Consensus 270 e~~~f~~iv 278 (706)
++++.+.+.
T Consensus 218 ~~l~~~~i~ 226 (348)
T 3iix_A 218 KEHDFDMVG 226 (348)
T ss_dssp HHHTCSEEC
T ss_pred HhcCCCEEe
Confidence 555655443
No 313
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=61.79 E-value=95 Score=28.27 Aligned_cols=89 Identities=16% Similarity=0.203 Sum_probs=55.0
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhh
Q 005248 221 SPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300 (706)
Q Consensus 221 ~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~ 300 (706)
.++++.||++|+.+.|=+| |+|+++.++ .+.+. .+.|.||+|+.|... |+.+.
T Consensus 22 ~~l~~~~~~~g~~~~l~TN-G~l~~~~~~------------------~l~~~-~d~v~isld~~~~~~----~~~~~--- 74 (182)
T 3can_A 22 IDILKRCGQQGIHRAVDTT-LLARKETVD------------------EVMRN-CELLLIDLKSMDSTV----HQTFC--- 74 (182)
T ss_dssp HHHHHHHHHTTCCEEEECT-TCCCHHHHH------------------HHHHT-CSEEEEECCCSCHHH----HHHHH---
T ss_pred HHHHHHHHHCCCcEEEECC-CCCCHHHHH------------------HHHhh-CCEEEEECCCCCHHH----HHHHh---
Confidence 6899999999999888887 567543222 12233 567999999988542 33321
Q ss_pred hcCCCCCcccccccccCCCCCCchhhHHHHHHHhhcCCCceeEEecCC---CCcccch
Q 005248 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE---PPEKEID 355 (706)
Q Consensus 301 ~~eg~~YPLHLGVTEAG~g~~G~IKSavGiG~LL~dGIGDTIRVSLT~---dP~~EV~ 355 (706)
| ... -.|. -+|-.|...|+-=.||+-++. +-.+|++
T Consensus 75 -----------g-----~~~-~~i~--~~i~~l~~~g~~v~i~~~v~~~~n~n~~~~~ 113 (182)
T 3can_A 75 -----------D-----VPN-ELIL--KNIRRVAEADFPYYIRIPLIEGVNADEKNIK 113 (182)
T ss_dssp -----------S-----SCS-HHHH--HHHHHHHHTTCCEEEEEEECBTTTCSHHHHH
T ss_pred -----------C-----CCH-HHHH--HHHHHHHhCCCeEEEEEEEECCCCCCHHHHH
Confidence 1 011 1232 345667777887777777776 3344554
No 314
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=61.42 E-value=33 Score=36.32 Aligned_cols=68 Identities=12% Similarity=0.156 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHHc---CCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhhhcCce
Q 005248 115 KDVAGTVEEVMRIADQ---GADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~a---GceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~~~~ki 185 (706)
.+.+..++|+.++.+. |...+.+-+-. .++.+.++.||+.+ |-+++|..|.|- ++.-|+..++.++..
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~---G~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 245 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAV---GRDTALMVDFNQGLDMAEAMHRTRQIDDL 245 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHH---CTTSEEEEECTTCCCHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHh---CCCCEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 5789999999999999 99999998854 56778888888753 567999999884 455555566666654
No 315
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=61.06 E-value=32 Score=36.34 Aligned_cols=68 Identities=15% Similarity=0.182 Sum_probs=53.2
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 115 KDVAGTVEEVMRIADQ-GADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~a-GceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
.|.+..++++.++.+. |...+.+-+-. .++.+.++.||+.+ |-+++|..|.| |++.-|+..++.++++
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~---G~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 239 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALL---GPDIALMLDFNQSLDPAEATRRIARLADY 239 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHH---CTTSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHh---CCCCeEEEeCCCCCCHHHHHHHHHHHHhh
Confidence 6889999999999999 99999998743 46778888888753 66799999988 4555555666666654
No 316
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=60.94 E-value=78 Score=33.38 Aligned_cols=57 Identities=12% Similarity=-0.054 Sum_probs=27.7
Q ss_pred HHHHHHHHHHc-CCeEE-EecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 220 FSPLVEKCKKY-GRAVR-IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 220 f~~vv~~ake~-~~~IR-IGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~ 281 (706)
+.++++.+++. ++.++ |-+.-||-..+. +.| ..-++...+.++.+++.|+.-=.+|+
T Consensus 184 ~~~l~~~~~~~~~l~l~Gl~~H~gs~~~~~-~~~----~~~~~~~~~~~~~l~~~g~~~~~l~~ 242 (425)
T 2qgh_A 184 ALEMFLWAKKSAFLEPVSVHFHIGSQLLDL-EPI----IEASQKVAKIAKSLIALGIDLRFFDV 242 (425)
T ss_dssp HHHHHHHHHHCSSEEEEEEECCCBSSBCCH-HHH----HHHHHHHHHHHHHHHHTTCCCCEEEC
T ss_pred HHHHHHHHHhCCCccEEEEEEECCCCCCCH-HHH----HHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 45677778776 54432 334447764211 111 22334445555555555654223454
No 317
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=60.81 E-value=45 Score=35.17 Aligned_cols=59 Identities=7% Similarity=0.035 Sum_probs=39.4
Q ss_pred HHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHH
Q 005248 216 IEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRL 295 (706)
Q Consensus 216 I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrl 295 (706)
+......++.+|+++|+++ |.-.++. +.++.+..+||+-+.++ +++..+.++|+.
T Consensus 232 v~~a~~~iv~aaraaGk~~--g~~~~d~--------------------~~a~~~~~~Gf~~l~~~---~di~~l~~~~~~ 286 (339)
T 1izc_A 232 FVEAMTKFSTAAQRNGVPI--FGGALSV--------------------DMVPSLIEQGYRAIAVQ---FDVWGLSRLVHG 286 (339)
T ss_dssp HHHHHHHHHHHHHHTTCCE--EEECSSG--------------------GGHHHHHHTTEEEEEEE---EHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCce--eEecCCH--------------------HHHHHHHHhCCCEEEec---HHHHHHHHHHHH
Confidence 4556678999999999998 5433222 46677889999875544 366666566644
Q ss_pred HHHh
Q 005248 296 LVAE 299 (706)
Q Consensus 296 la~~ 299 (706)
..+.
T Consensus 287 ~v~~ 290 (339)
T 1izc_A 287 SLAQ 290 (339)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 318
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=59.94 E-value=17 Score=37.74 Aligned_cols=67 Identities=15% Similarity=0.192 Sum_probs=50.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHHHHhhhcCc
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDK 184 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al~a~~~~~k 184 (706)
.+.+..++++.++.+.|...+.+-+-. .++.+.++.||+.+ |-+++|..|.|-. +.-|+..++.++.
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~~~~~d~~~v~avR~~~---g~~~~l~vDan~~~~~~~a~~~~~~l~~ 209 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCGDEEQDFERLRRLHETL---AGRAVVRVDPNQSYDRDGLLRLDRLVQE 209 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH---TTSSEEEEECTTCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHHh---CCCCEEEEeCCCCCCHHHHHHHHHHHHh
Confidence 578999999999999999999998743 46778888888753 5679999998854 4445544454544
No 319
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=59.12 E-value=26 Score=37.44 Aligned_cols=68 Identities=22% Similarity=0.257 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---------------HHHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHHH
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---------------KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALR 177 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---------------~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al~ 177 (706)
.+.+..+++++++.+.|...+.+-+-. .++.+.++.||+. -|-++||..|.|-. ..-|+.
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a---~G~d~~l~vDaN~~~~~~~A~~ 219 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREA---VGSKADLLFGTHGQMVPSSAIR 219 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHH---HTTSSEEEECCCSCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHH---hCCCCeEEEECCCCCCHHHHHH
Confidence 578999999999999999999997532 2456677777775 35679999999854 455555
Q ss_pred HhhhcCce
Q 005248 178 VAECFDKI 185 (706)
Q Consensus 178 a~~~~~ki 185 (706)
.++.+++.
T Consensus 220 ~~~~L~~~ 227 (412)
T 4e4u_A 220 LAKRLEKY 227 (412)
T ss_dssp HHHHHGGG
T ss_pred HHHHhhhc
Confidence 55556654
No 320
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=58.90 E-value=16 Score=38.66 Aligned_cols=66 Identities=17% Similarity=0.254 Sum_probs=40.6
Q ss_pred HHHHHHHHHHcCCCEEEEec------C-------CHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh-cCc
Q 005248 120 TVEEVMRIADQGADLVRITV------Q-------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDK 184 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv------~-------~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-~~k 184 (706)
|.+++++++++|+|.|-+.. . +.....++.++++... .+++|+|||-=. ++.-+.+|+.. ++.
T Consensus 155 t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~--~~~iPVIA~GGI~~~~di~kala~GAd~ 232 (361)
T 3khj_A 155 TEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVAS--KFGIPIIADGGIRYSGDIGKALAVGASS 232 (361)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHH--HHTCCEEEESCCCSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHh--hcCCeEEEECCCCCHHHHHHHHHcCCCE
Confidence 56788999999999999841 0 0123455666654322 257999998443 34444444444 666
Q ss_pred eee
Q 005248 185 IRV 187 (706)
Q Consensus 185 iRI 187 (706)
|=+
T Consensus 233 V~v 235 (361)
T 3khj_A 233 VMI 235 (361)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 321
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=58.68 E-value=31 Score=34.60 Aligned_cols=91 Identities=14% Similarity=0.184 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHhhccCCcCcc-eeeccCCCHHHHHHHhhh-cCceeeCCCCCC
Q 005248 119 GTVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIP-LVADIHFAPSVALRVAEC-FDKIRVNPGNFA 193 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRvtv~~~---~~A~al~~I~~~L~~~g~~iP-LVADIHF~~~~Al~a~~~-~~kiRINPGNig 193 (706)
.-+++.+..+++|+..+++-+... -..+.|..|++. +++| ++-|+=.|+.-..+|.++ +|.|=+.--.+
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~-----v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l- 139 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREA-----VDLPLLRKDFVVDPFMLEEARAFGASAALLIVALL- 139 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHH-----CCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH-
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHh-----cCCCEEECCcCCCHHHHHHHHHcCCCEEEECccch-
Confidence 346888899999999999943322 267789999985 7888 567877887555566665 77776532211
Q ss_pred cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 194 ~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
+ +.++++++.|+++|....+-|
T Consensus 140 --------------------~---~~l~~l~~~a~~lGl~~lvev 161 (254)
T 1vc4_A 140 --------------------G---ELTGAYLEEARRLGLEALVEV 161 (254)
T ss_dssp --------------------G---GGHHHHHHHHHHHTCEEEEEE
T ss_pred --------------------H---HHHHHHHHHHHHCCCeEEEEE
Confidence 1 367789999999998877666
No 322
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=58.52 E-value=16 Score=38.99 Aligned_cols=66 Identities=18% Similarity=0.236 Sum_probs=43.7
Q ss_pred HHHHHHHHHHcCCCEEEEe------cC-------CHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh-cCc
Q 005248 120 TVEEVMRIADQGADLVRIT------VQ-------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDK 184 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvt------v~-------~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-~~k 184 (706)
|.+++++++++|+|.|.+. +. +.....++.++++.++ ..++|+|||-=. ++.-+.+|+.. ++.
T Consensus 159 t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~--~~~iPVIA~GGI~~~~di~kala~GAd~ 236 (366)
T 4fo4_A 159 TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVAN--EYGIPVIADGGIRFSGDISKAIAAGASC 236 (366)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHG--GGTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHh--hcCCeEEEeCCCCCHHHHHHHHHcCCCE
Confidence 5788999999999999992 11 1234566777765433 367999997555 45445555554 676
Q ss_pred eee
Q 005248 185 IRV 187 (706)
Q Consensus 185 iRI 187 (706)
|=+
T Consensus 237 V~v 239 (366)
T 4fo4_A 237 VMV 239 (366)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 323
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=58.40 E-value=21 Score=37.60 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHHHHhhhcCc
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDK 184 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al~a~~~~~k 184 (706)
.|.+..++++.++.+.|...+.+-+-. .++.+.+..||+.+ -+++|..|.|-. +.-|+..++.++.
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~----~~~~l~vDan~~~~~~~A~~~~~~L~~ 217 (385)
T 3i6e_A 147 PDFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF----PEFRVRVDYNQGLEIDEAVPRVLDVAQ 217 (385)
T ss_dssp SSHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC----TTSEEEEECTTCCCGGGHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC----CCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 477888999999999999999998754 46888888888864 358999998754 4445555555544
No 324
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=58.33 E-value=76 Score=33.60 Aligned_cols=192 Identities=16% Similarity=0.198 Sum_probs=108.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCC-EEEEecCCH-HHHHHHHHHHHhhccCCcCcceeec--cCCCH---------------H
Q 005248 113 DTKDVAGTVEEVMRIADQGAD-LVRITVQGK-READACFEIKNSLVQKNYNIPLVAD--IHFAP---------------S 173 (706)
Q Consensus 113 ~T~Dv~atv~Qi~~L~~aGce-iVRvtv~~~-~~A~al~~I~~~L~~~g~~iPLVAD--IHF~~---------------~ 173 (706)
.-.|.++++++..++.++|.. +|-+|..+. ++...|.+|-+++...| +.+||= +|..+ .
T Consensus 44 ~l~d~~~~~~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~G--v~Iv~~TG~y~~~~~~~~~~~~~~~~~e~ 121 (363)
T 3ovg_A 44 LMLNVDASIKEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLG--GNVIMSTGFHKAKFYDKYSSWLAVVPTEE 121 (363)
T ss_dssp CBCCHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGT--CEEEEEEECCCGGGSCTTTSHHHHSCHHH
T ss_pred cccCHHHHHHHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCC--cEEEEeCCCCcCcccccCcHhhhcCCHHH
Confidence 346889999999999999986 566666655 88999999998743223 444543 33221 2
Q ss_pred HHHHHh-h---hcCc----------eeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 174 VALRVA-E---CFDK----------IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 174 ~Al~a~-~---~~~k----------iRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
++..-+ | .+++ =-|-||-|+-+-. |. ..|+ .=++.|+.-+++|++.|.||=|=+-
T Consensus 122 l~~~~~~ei~~Gi~~~~~~gp~~~~t~ikaG~ikig~s-~~--~~t~--------~Q~~~f~aq~~~A~e~glPViiH~r 190 (363)
T 3ovg_A 122 IVKMCVAEIEEGMDEYNYNGPVVKRSKAKAGIIKAGTG-YG--AIDR--------LELKALEVAARTSILTGCPILVHTQ 190 (363)
T ss_dssp HHHHHHHHHHTCCBTTTTSSSCCCBCSCCCCEEEEEEE-ET--BEEH--------HHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHHHHHhcccccccccccccCCCccCCEEEEEeC-CC--CCCH--------HHHHHHHHHHHHHHHhCCEEEEeCC
Confidence 332211 2 2444 1144776632110 10 0011 1145788899999999999865442
Q ss_pred CCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCC--cEEEE-Eec-CChhHHHHHHHHHH-HhhhcCCCCCccccccc
Q 005248 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFH--NFLFS-MKA-SNPVVMVQAYRLLV-AEMYVHGWDYPLHLGVT 314 (706)
Q Consensus 240 ~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~--~iviS-~Ka-Snv~~~i~ayrlla-~~~~~eg~~YPLHLGVT 314 (706)
.|. + |++.++++++.|.. .+++. |=. .+.. .+ +.+. ++ | .+||+|
T Consensus 191 ~gr-------------~-----a~d~l~iL~e~g~~~~~vvi~H~~~~~~~~---~a-~~~l~~~----G----~yI~f~ 240 (363)
T 3ovg_A 191 LGT-------------M-----ALEVAKHLIGFGANPDKIQISHLNKNPDKY---YY-EKVIKET----G----VTLCFD 240 (363)
T ss_dssp TTC-------------S-----HHHHHHHHHHHTCCGGGEEEECGGGSCCHH---HH-HHHHHHH----C----CEEEEC
T ss_pred CCC-------------C-----HHHHHHHHHhcCCCCCcEEEEcCCCCCCHH---HH-HHHHHHC----C----cEEEEC
Confidence 221 1 34677899888874 55552 222 2222 22 3333 32 3 467777
Q ss_pred ccCCCCCCc---hhhHHHHHHHhhcCCCceeEEecCCCC
Q 005248 315 EAGEGEDGR---MKSAIGIGTLLQDGLGDTIRVSLTEPP 350 (706)
Q Consensus 315 EAG~g~~G~---IKSavGiG~LL~dGIGDTIRVSLT~dP 350 (706)
|.+.... -+.+-.|-.|+..|-.|-|-+| |+.|
T Consensus 241 --g~~~~~~~~~~~ra~~l~~lv~~~p~drILle-TDap 276 (363)
T 3ovg_A 241 --GPDRVKYYPDSLLAENIKYLVDKGLQKHITLS-LDAG 276 (363)
T ss_dssp --CTTCTTTCCHHHHHHHHHHHHHTTCGGGEEEC-CCCC
T ss_pred --CeeccccCChhHHHHHHHHHHHhcCCCeEEEe-CCCC
Confidence 3221111 1245567777777877777777 4444
No 325
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=58.22 E-value=66 Score=33.39 Aligned_cols=143 Identities=13% Similarity=0.106 Sum_probs=0.0
Q ss_pred HHHHHcCCCEEEEe---------------cCCHHHHHHHHHHHHhhccCCcC-cceeeccCC-----CHHHHHHHhhhcC
Q 005248 125 MRIADQGADLVRIT---------------VQGKREADACFEIKNSLVQKNYN-IPLVADIHF-----APSVALRVAECFD 183 (706)
Q Consensus 125 ~~L~~aGceiVRvt---------------v~~~~~A~al~~I~~~L~~~g~~-iPLVADIHF-----~~~~Al~a~~~~~ 183 (706)
+-+.++|+|++=+. +.=.+-....+.|++ +.+ .|+|+|.=| ++.-|++.+.-+.
T Consensus 31 ~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r-----~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~ 105 (275)
T 1o66_A 31 ALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVAR-----GAKNAMIVSDLPFGAYQQSKEQAFAAAAELM 105 (275)
T ss_dssp HHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHH-----HCSSSEEEEECCTTSSSSCHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHh-----hCCCCeEEEECCCCCccCCHHHHHHHHHHHH
Q ss_pred ceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE--EEecCCCCCchhHHHhh---CCChHHH
Q 005248 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV--RIGTNHGSLSDRIMSYY---GDSPRGM 258 (706)
Q Consensus 184 kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I--RIGvN~GSL~~~il~ry---gdt~eam 258 (706)
|--.+==|+=++. .+.+.|+++.+.|+|+ -||.+-=|.... .-| |.| +..
T Consensus 106 kaGa~aVklEdg~----------------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~--ggf~v~grt-~~a 160 (275)
T 1o66_A 106 AAGAHMVKLEGGV----------------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAF--GGYKVQGRG-GKA 160 (275)
T ss_dssp HTTCSEEEEECSG----------------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC--------------CH
T ss_pred HcCCcEEEECCcH----------------------HHHHHHHHHHHcCCCeEeeeccCceeeccc--CCeEEEeCh-HHH
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCcc
Q 005248 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL 309 (706)
Q Consensus 259 VeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPL 309 (706)
+.+++-++.+++-|-+-|++-+ ++. +..+.++++ .+-|+
T Consensus 161 -~~~i~rA~a~~eAGA~~ivlE~----vp~--~~a~~it~~-----l~iP~ 199 (275)
T 1o66_A 161 -QALLNDAKAHDDAGAAVVLMEC----VLA--ELAKKVTET-----VSCPT 199 (275)
T ss_dssp -HHHHHHHHHHHHTTCSEEEEES----CCH--HHHHHHHHH-----CSSCE
T ss_pred -HHHHHHHHHHHHcCCcEEEEec----CCH--HHHHHHHHh-----CCCCE
No 326
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=58.21 E-value=38 Score=35.14 Aligned_cols=92 Identities=15% Similarity=0.179 Sum_probs=61.6
Q ss_pred CCCCceEE--EeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHH-----------------------HH
Q 005248 99 GSEHPIRV--QTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEI-----------------------KN 153 (706)
Q Consensus 99 GG~~PI~V--QSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I-----------------------~~ 153 (706)
+|.+=|-+ -|-..+-..|...|++-.++|.++|-+.+=++++|...|+.+.+. -+
T Consensus 101 ~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~ 180 (265)
T 1wv2_A 101 DGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLR 180 (265)
T ss_dssp TSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHH
T ss_pred CCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHH
Confidence 44443333 344556678999999998888777777776777777666655321 12
Q ss_pred hhccCCcCcceeeccCCC-HHHHHHHhhh-cCceeeCCCC
Q 005248 154 SLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 154 ~L~~~g~~iPLVADIHF~-~~~Al~a~~~-~~kiRINPGN 191 (706)
++++ ..++|+|+|-... |.-|-.|++. ++.|=+|=+=
T Consensus 181 ~I~e-~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI 219 (265)
T 1wv2_A 181 IILE-EAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAI 219 (265)
T ss_dssp HHHH-HCSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred HHHh-cCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 2222 3679999996654 7777888886 9988887543
No 327
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=58.21 E-value=23 Score=33.69 Aligned_cols=62 Identities=21% Similarity=0.229 Sum_probs=44.4
Q ss_pred HHHHHHHHHcCCCEEEEecC-----------CHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh-cCceee
Q 005248 121 VEEVMRIADQGADLVRITVQ-----------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDKIRV 187 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~-----------~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-~~kiRI 187 (706)
.+++.++.++|+++|-+..+ .....+.++++++. +++|++|+-=. ++.-+.++++. ++.+=+
T Consensus 129 ~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~-----~~ipvia~GGI~~~~~~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 129 VEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQS-----VDAKVIAEGNVITPDMYKRVMDLGVHCSVV 203 (223)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHH-----CCSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhh-----CCCCEEEecCCCCHHHHHHHHHcCCCEEEE
Confidence 56677899999999966432 22334566667664 57999999888 88888877765 666654
No 328
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=57.43 E-value=14 Score=34.66 Aligned_cols=62 Identities=13% Similarity=0.306 Sum_probs=44.2
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 005248 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNi 192 (706)
.+|+.+..++|+|+| +. |... .+.+...++ ..+|+++++| ++.-+..|.+. ++-|-++|.+.
T Consensus 73 ~~~~~~a~~~Gad~i-v~-~~~~-~~~~~~~~~------~g~~vi~g~~-t~~e~~~a~~~Gad~vk~~~~~~ 135 (205)
T 1wa3_A 73 VEQCRKAVESGAEFI-VS-PHLD-EEISQFCKE------KGVFYMPGVM-TPTELVKAMKLGHTILKLFPGEV 135 (205)
T ss_dssp HHHHHHHHHHTCSEE-EC-SSCC-HHHHHHHHH------HTCEEECEEC-SHHHHHHHHHTTCCEEEETTHHH
T ss_pred HHHHHHHHHcCCCEE-Ec-CCCC-HHHHHHHHH------cCCcEECCcC-CHHHHHHHHHcCCCEEEEcCccc
Confidence 457888889999999 64 4332 334444443 5789999997 56667778886 99998888543
No 329
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=57.02 E-value=35 Score=33.55 Aligned_cols=137 Identities=18% Similarity=0.220 Sum_probs=78.3
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeecc-C--------CC---HHHHHHHhhh-cCce--
Q 005248 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI-H--------FA---PSVALRVAEC-FDKI-- 185 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADI-H--------F~---~~~Al~a~~~-~~ki-- 185 (706)
.+.+..+.+.|+..|-++ + ..++.+++.+ .-++|++..+ | .+ ...+..|++. ++.|
T Consensus 48 ~~~~~~~~~~g~~~i~~~-~-----~~~~~~~~~~---~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~ 118 (273)
T 2qjg_A 48 RKTVNDVAEGGANAVLLH-K-----GIVRHGHRGY---GKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADAVSI 118 (273)
T ss_dssp HHHHHHHHHHTCSEEEEC-H-----HHHHSCCCSS---SCCCEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEeC-H-----HHHHHHHHhh---cCCCCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCEEEE
Confidence 356677788999999753 2 1222222221 2257877432 1 11 3455667776 9999
Q ss_pred eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC-CCCchhHHHhhCCChHHHHHHHHH
Q 005248 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH-GSLSDRIMSYYGDSPRGMVESAFE 264 (706)
Q Consensus 186 RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~-GSL~~~il~rygdt~eamVeSAle 264 (706)
.+|+|+.... ...+.++.+++.|+++|+++=+.+.. |- .+ +-|-++ ++..+
T Consensus 119 ~l~~~~~~~~-------------------~~~~~~~~v~~~~~~~g~~viv~~~~~G~---~l--~~~~~~----~~~~~ 170 (273)
T 2qjg_A 119 HVNVGSDEDW-------------------EAYRDLGMIAETCEYWGMPLIAMMYPRGK---HI--QNERDP----ELVAH 170 (273)
T ss_dssp EEEETSTTHH-------------------HHHHHHHHHHHHHHHHTCCEEEEEEECST---TC--SCTTCH----HHHHH
T ss_pred EEecCCCCHH-------------------HHHHHHHHHHHHHHHcCCCEEEEeCCCCc---cc--CCCCCH----hHHHH
Confidence 9998865221 12245777999999999998665421 11 11 011233 23333
Q ss_pred HHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHh
Q 005248 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 265 ~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~ 299 (706)
.++.+++.|-+-|.+|-. .+ ++..+.+++.
T Consensus 171 ~a~~a~~~Gad~i~~~~~-~~----~~~l~~i~~~ 200 (273)
T 2qjg_A 171 AARLGAELGADIVKTSYT-GD----IDSFRDVVKG 200 (273)
T ss_dssp HHHHHHHTTCSEEEECCC-SS----HHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCC-CC----HHHHHHHHHh
Confidence 448899999987777731 22 3445555555
No 330
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=56.86 E-value=50 Score=34.42 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=65.0
Q ss_pred cCCCCceEEEeccCC----CCCCHHHHHHHHHHHHHcCCCEEEEecCC-----------HHHHHHHHHHHHhhccCCcCc
Q 005248 98 IGSEHPIRVQTMTTN----DTKDVAGTVEEVMRIADQGADLVRITVQG-----------KREADACFEIKNSLVQKNYNI 162 (706)
Q Consensus 98 IGG~~PI~VQSMt~t----~T~Dv~atv~Qi~~L~~aGceiVRvtv~~-----------~~~A~al~~I~~~L~~~g~~i 162 (706)
+|.+-||.|- +... .-.|.+.+++-+++|+++|++++=++..+ .-..+.+..||+. +++
T Consensus 216 vG~d~pV~vR-ls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-----~~i 289 (349)
T 3hgj_A 216 VPRELPLFVR-VSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR-----VGL 289 (349)
T ss_dssp SCTTSCEEEE-EESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH-----HCC
T ss_pred hcCCceEEEE-eccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHH-----cCc
Confidence 4667777662 2111 23467888999999999999999988411 1234567778875 579
Q ss_pred ceeeccCC-CHHHHHHHhhh--cCceeeCCCCCCcch
Q 005248 163 PLVADIHF-APSVALRVAEC--FDKIRVNPGNFADRR 196 (706)
Q Consensus 163 PLVADIHF-~~~~Al~a~~~--~~kiRINPGNig~~~ 196 (706)
|+++.--+ ++..|.++++. +|-|=+-=+-+.+++
T Consensus 290 PVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPd 326 (349)
T 3hgj_A 290 RTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPY 326 (349)
T ss_dssp EEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTT
T ss_pred eEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCch
Confidence 99998775 79999988874 787776655555543
No 331
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=56.70 E-value=19 Score=37.49 Aligned_cols=62 Identities=16% Similarity=0.143 Sum_probs=42.9
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeC
Q 005248 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVN 188 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRIN 188 (706)
+..+..+.++|+|+| -+... ..++++.+.+++.+..+|+|+|+|=-.. |+.|++. ++-|++|
T Consensus 90 ide~qil~aaGAD~I-d~s~~----~~~~~li~~i~~~~~g~~vvv~v~~~~E-a~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 90 FVEAQILEELKVDML-DESEV----LTMADEYNHINKHKFKTPFVCGCTNLGE-ALRRISEGASMIRTK 152 (297)
T ss_dssp HHHHHHHHHTTCSEE-EEETT----SCCSCSSCCCCGGGCSSCEEEEESSHHH-HHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEE-EcCCC----CCHHHHHHHHHhcCCCCeEEEEeCCHHH-HHHHHhCCCCEEEEC
Confidence 677788889999999 32221 1233455555555678999999996544 5566654 8999999
No 332
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=56.43 E-value=8.3 Score=37.51 Aligned_cols=69 Identities=13% Similarity=0.075 Sum_probs=50.4
Q ss_pred HHHHHHHHcCCeEEEecCCCCCc-hhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHh
Q 005248 222 PLVEKCKKYGRAVRIGTNHGSLS-DRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 222 ~vv~~ake~~~~IRIGvN~GSL~-~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~ 299 (706)
+++++|+++|+++ -+|.+|+- ...-+ -.+..+.+.+.+++|++.|. .|+||==|..+.++ ..++...+.
T Consensus 115 ~~a~~A~e~gv~l--EIn~s~~~~~~~~~-----R~~~~~~~~~il~l~k~~g~-~ivisSDAh~~~~v-~~~~~~~~l 184 (212)
T 1v77_A 115 VLAKLMVKKNVAL--GFSLRPLLYSNPYE-----RANLLRFMMKAWKLVEKYKV-RRFLTSSAQEKWDV-RYPRDLISL 184 (212)
T ss_dssp HHHHHHHHHTCEE--EEESHHHHHSCHHH-----HHHHHHHHHHHHHHHHHHTC-CEEEECCCSSGGGC-CCHHHHHHH
T ss_pred HHHHHHHHCCeEE--EEECcHHhcCCcch-----HHHHHHHHHHHHHHHHhcCC-CEEEeCCCCChhhc-CCHHHHHHH
Confidence 6899999999998 55666641 11111 24778899999999999998 89999888887766 444444433
No 333
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=56.43 E-value=43 Score=31.23 Aligned_cols=49 Identities=20% Similarity=0.333 Sum_probs=34.9
Q ss_pred hHHHHHHHHHHcCCeEEEecCCCCC--chhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChh
Q 005248 219 VFSPLVEKCKKYGRAVRIGTNHGSL--SDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287 (706)
Q Consensus 219 ~f~~vv~~ake~~~~IRIGvN~GSL--~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~ 287 (706)
.+.++++.++++|+.+.|-+| |++ .++.+. +++ +. .+.|.||+++.|..
T Consensus 86 ~l~~l~~~~~~~~~~i~i~Tn-g~~~~~~~~~~-----------------~l~-~~-~~~v~isld~~~~~ 136 (245)
T 3c8f_A 86 FVRDWFRACKKEGIHTCLDTN-GFVRRYDPVID-----------------ELL-EV-TDLVMLDLKQMNDE 136 (245)
T ss_dssp HHHHHHHHHHTTTCCEEEEEC-CCCCCCCHHHH-----------------HHH-HT-CSEEEEECCCSSHH
T ss_pred HHHHHHHHHHHcCCcEEEEeC-CCcCcCHHHHH-----------------HHH-Hh-CCEEEEeCCCCCHH
Confidence 357899999999999999999 676 332211 122 23 56799999998754
No 334
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=56.36 E-value=32 Score=34.69 Aligned_cols=141 Identities=11% Similarity=0.192 Sum_probs=84.4
Q ss_pred HHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhcc---------------CCc------------CcceeeccCCCHHH
Q 005248 122 EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ---------------KNY------------NIPLVADIHFAPSV 174 (706)
Q Consensus 122 ~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~---------------~g~------------~iPLVADIHF~~~~ 174 (706)
.+|+++.++|++ .|-+|-.+.++.++.+.+.++. .++ ++++++=| -.+..
T Consensus 81 ~~i~~~l~~g~~--~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~I-Et~~a 157 (267)
T 2vws_A 81 PLIKQVLDIGAQ--TLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQV-ESKTA 157 (267)
T ss_dssp HHHHHHHHTTCC--EEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEEC-CSHHH
T ss_pred HHHHHHHHhCCC--EEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEE-CCHHH
Confidence 678889999999 4566666666666666665431 111 25566555 33333
Q ss_pred HHHHhh------hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHH
Q 005248 175 ALRVAE------CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248 (706)
Q Consensus 175 Al~a~~------~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il 248 (706)
.. .++ .+|.+=|-|+.+.-.-. ..|+ .+...+....+.++.+|+++|++. |+..+
T Consensus 158 v~-~~~eIa~~~gvd~l~iG~~DL~~~lg----~~~~-----~~~p~v~~a~~~iv~aa~aaG~~~--~v~~~------- 218 (267)
T 2vws_A 158 LD-NLDEILDVEGIDGVFIGPADLSASLG----YPDN-----AGHPEVQRIIETSIRRIRAAGKAA--GFLAV------- 218 (267)
T ss_dssp HH-THHHHHTSTTCCEEEECHHHHHHHTT----CSSS-----CCTHHHHHHHHHHHHHHHHTTCEE--EEECS-------
T ss_pred HH-HHHHHhCCCCCCEEEEChHHHHHHhC----CCCC-----CCCHHHHHHHHHHHHHHHHhCCeE--EEecC-------
Confidence 32 222 25666666654422110 0011 001123445667999999999997 66221
Q ss_pred HhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhh
Q 005248 249 SYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300 (706)
Q Consensus 249 ~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~ 300 (706)
+| +.++.+.++||+-+.++ +|+..+.++.+.+.+.+
T Consensus 219 -----d~--------~~a~~~~~~G~~~~s~~---~d~~~l~~~~~~~~~~~ 254 (267)
T 2vws_A 219 -----AP--------DMAQQCLAWGANFVAVG---VDTMLYSDALDQRLAMF 254 (267)
T ss_dssp -----SH--------HHHHHHHHTTCCEEEEE---EHHHHHHHHHHHHHHTT
T ss_pred -----CH--------HHHHHHHHCCCCEEEEc---hHHHHHHHHHHHHHHHH
Confidence 23 46778889999977665 57777888888888774
No 335
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=56.34 E-value=15 Score=35.79 Aligned_cols=65 Identities=15% Similarity=0.164 Sum_probs=45.3
Q ss_pred HHHHHHHHHHcCCCEEEEecCCH------HHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh-cCceeeCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGK------READACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDKIRVNP 189 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~------~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-~~kiRINP 189 (706)
.++.++++.++|++.+=++-.+. ...+.+++|++. +++|+++.-.. ++.-+..+.+. ++.|=|.=
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~-----~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~ 109 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-----TTLPIIASGGAGKMEHFLEAFLRGADKVSINT 109 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGG-----CCSCEEEESCCCSHHHHHHHHHTTCSEECCSH
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHh-----CCCCEEEeCCCCCHHHHHHHHHcCCCeeehhh
Confidence 46788889999999998874432 235667777764 78999888544 46666666665 88875543
No 336
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=56.27 E-value=97 Score=35.97 Aligned_cols=153 Identities=12% Similarity=0.047 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHHHcCCCE--EEEe----------cCCHHHHHHHHHHHHhhccCCcCc-----ceeeccCCCHHH---
Q 005248 115 KDVAGTVEEVMRIADQGADL--VRIT----------VQGKREADACFEIKNSLVQKNYNI-----PLVADIHFAPSV--- 174 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGcei--VRvt----------v~~~~~A~al~~I~~~L~~~g~~i-----PLVADIHF~~~~--- 174 (706)
..++.-++=+..|.++|.++ +=+. .++...-+.+..|++.+.+.-+.+ .+|+=-|+...+
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~ 201 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFK 201 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHcccchHHHHhcccccccccccCCcchHH
Confidence 34555566677788888777 7775 566667778888888753211110 112223444332
Q ss_pred -HHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhC
Q 005248 175 -ALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252 (706)
Q Consensus 175 -Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~ryg 252 (706)
...|+++ ++-+||.= .. . .+ ++++..++.||+.|..++..+.+.. ++.+-|.
T Consensus 202 ~i~~a~~~Gvd~irIf~-s~-------n--------------~l-~~l~~~i~~ak~~G~~v~~~i~~~~---d~~dp~r 255 (718)
T 3bg3_A 202 FCEVAKENGMDVFRVFD-SL-------N--------------YL-PNMLLGMEAAGSAGGVVEAAISYTG---DVADPSR 255 (718)
T ss_dssp HHHHHHHHTCCEEEEEC-SS-------C--------------CH-HHHHHHHHHHHTTTSEEEEEEECCS---CTTCTTC
T ss_pred HHHHHHhcCcCEEEEEe-cH-------H--------------HH-HHHHHHHHHHHHcCCeEEEEEEeec---cccCCCC
Confidence 2345565 99999851 11 0 11 2778899999999999887776652 1111121
Q ss_pred C--ChHHHHHHHHHHHHHHHHCCCCcEEEEEecCC----hhHHHHHHHHHHHh
Q 005248 253 D--SPRGMVESAFEFARICRKLDFHNFLFSMKASN----PVVMVQAYRLLVAE 299 (706)
Q Consensus 253 d--t~eamVeSAle~~~i~e~~~f~~iviS~KaSn----v~~~i~ayrlla~~ 299 (706)
. ++ +-.++.++.+++.|-+ .|++|-+. |..+-+-.+.|.++
T Consensus 256 ~~~~~----e~~~~~a~~l~~~Ga~--~I~l~DT~G~~~P~~v~~lV~~lk~~ 302 (718)
T 3bg3_A 256 TKYSL----QYYMGLAEELVRAGTH--ILCIKDMAGLLKPTACTMLVSSLRDR 302 (718)
T ss_dssp CTTCH----HHHHHHHHHHHHHTCS--EEEEECTTSCCCHHHHHHHHHHHHHH
T ss_pred CCCCH----HHHHHHHHHHHHcCCC--EEEEcCcCCCcCHHHHHHHHHHHHHh
Confidence 1 33 4456677777888887 67788654 44443444444444
No 337
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=56.26 E-value=16 Score=38.91 Aligned_cols=113 Identities=10% Similarity=0.100 Sum_probs=68.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHH
Q 005248 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (706)
+|.+..++|=- |. .-|.+.+++-+++|++.|.+.+===++ .++-+.+++++++ +++||.+|=++. ..-+.
T Consensus 229 ~g~~~~l~vDa--N~-~~~~~~A~~~~~~l~~~~l~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 299 (412)
T 4h1z_A 229 LGPAVRIACDM--HW-AHTASEAVALIKAMEPHGLWFAEAPVR-TEDIDGLARVAAS-----VSTAIAVGEEWRTVHDMV 299 (412)
T ss_dssp HCSSSEEEEEC--CS-CCCHHHHHHHHHHHGGGCEEEEECCSC-TTCHHHHHHHHHH-----CSSEEEECTTCCSHHHHH
T ss_pred cCCeEEEEecc--cc-CCCHHHHHHHHHhhcccccceecCCCC-ccchHHHHHHHhh-----cCCccccCCcccchHhHH
Confidence 35555555421 11 135666677777777777555431122 1345677788875 889999996654 44344
Q ss_pred HHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCC
Q 005248 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (706)
Q Consensus 177 ~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GS 242 (706)
..++ +++=+.+.++. |. +. ...++...|+.+|+++=+|.++||
T Consensus 300 ~~i~~~a~div~~d~~~-GG----it------------------~~~kia~~A~~~gi~v~~h~~~~~ 344 (412)
T 4h1z_A 300 PRVARRALAIVQPEMGH-KG----IT------------------QFMRIGAYAHVHHIKVIPHATIGA 344 (412)
T ss_dssp HHHHTTCCSEECCCHHH-HH----HH------------------HHHHHHHHHHHTTCEECCCCCSSC
T ss_pred HHHHcCCCCEEEecCCC-CC----hH------------------HHHHHHHHHHHCCCcEEecCCcch
Confidence 4443 47766666543 32 11 456789999999999977776665
No 338
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=56.12 E-value=36 Score=34.75 Aligned_cols=69 Identities=12% Similarity=-0.027 Sum_probs=49.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEe----cCCHHH-HHHHHHHHHhhccCCc-CcceeeccCCCHHHHH----HHhhh-c
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRIT----VQGKRE-ADACFEIKNSLVQKNY-NIPLVADIHFAPSVAL----RVAEC-F 182 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvt----v~~~~~-A~al~~I~~~L~~~g~-~iPLVADIHF~~~~Al----~a~~~-~ 182 (706)
-.|.+..++-++++.++||+.+++. +-++++ .+-++.|++. + ++||.-=.|=+.-+|. +|+++ +
T Consensus 155 ~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~-----~~~~~l~~H~Hn~~Gla~An~laAv~aGa 229 (302)
T 2ftp_A 155 DVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASE-----VPRERLAGHFHDTYGQALANIYASLLEGI 229 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTT-----SCGGGEEEEEBCTTSCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHh-----CCCCeEEEEeCCCccHHHHHHHHHHHhCC
Confidence 4688889999999999999999998 223333 4555666653 5 5899776666887776 56665 7
Q ss_pred Cceee
Q 005248 183 DKIRV 187 (706)
Q Consensus 183 ~kiRI 187 (706)
++|=.
T Consensus 230 ~~vd~ 234 (302)
T 2ftp_A 230 AVFDS 234 (302)
T ss_dssp CEEEE
T ss_pred CEEEe
Confidence 77763
No 339
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=55.91 E-value=30 Score=35.87 Aligned_cols=83 Identities=19% Similarity=0.153 Sum_probs=60.1
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHH-----------------------HHHhhccCCcC-ccee
Q 005248 110 TTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFE-----------------------IKNSLVQKNYN-IPLV 165 (706)
Q Consensus 110 t~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~-----------------------I~~~L~~~g~~-iPLV 165 (706)
..+-.-|+..|++..+.|.+.|-+.+=..++|...|+.+.+ .-+++++...+ +|+|
T Consensus 103 ~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI 182 (268)
T 2htm_A 103 PTYLLPDPLETLKAAERLIEEDFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVV 182 (268)
T ss_dssp TTTTCCCHHHHHHHHHHHHHTTCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBE
T ss_pred ccccCcCHHHHHHHHHHHHHCCCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEE
Confidence 34556789999999999988888877566788877666521 12233332466 9999
Q ss_pred eccCCC-HHHHHHHhhh-cCceeeCCCCC
Q 005248 166 ADIHFA-PSVALRVAEC-FDKIRVNPGNF 192 (706)
Q Consensus 166 ADIHF~-~~~Al~a~~~-~~kiRINPGNi 192 (706)
+|-... |.-|-.|++. ++.|=+|=+=.
T Consensus 183 ~~GGI~tpsDAa~AmeLGAdgVlVgSAI~ 211 (268)
T 2htm_A 183 VDAGLGLPSHAAEVMELGLDAVLVNTAIA 211 (268)
T ss_dssp EESCCCSHHHHHHHHHTTCCEEEESHHHH
T ss_pred EeCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 998875 7888888886 99998886654
No 340
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=55.88 E-value=29 Score=36.56 Aligned_cols=67 Identities=21% Similarity=0.339 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCCCH--HHHHHHhhhcCc
Q 005248 115 KDVAGTVEEVMRIAD-QGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHFAP--SVALRVAECFDK 184 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~-aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF~~--~~Al~a~~~~~k 184 (706)
.|.+..++|+.+..+ .|...+.+-+-. .++.+.++.||+.+ |-+++|..|.|-.+ .-|+..++.+++
T Consensus 147 ~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~---g~~~~l~vDaN~~~~~~~A~~~~~~l~~ 219 (382)
T 3dgb_A 147 GDTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKAL---GDSASVRVDVNQAWDEAVALRACRILGG 219 (382)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHH---GGGSEEEEECTTCBCHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHc---CCCCeEEEeCCCCCCHHHHHHHHHHHhh
Confidence 467888999988877 699999998753 56778888888753 56799999987554 444444454544
No 341
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=55.63 E-value=45 Score=34.67 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=51.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhhhcCce
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDKI 185 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~~~~ki 185 (706)
+.|.+..++++.++.+.|..-+.+-+- -.++.+.+..|++.+ |-+++|..|.|- ++.-|+..++.++++
T Consensus 142 ~~~~~~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avr~a~---g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 214 (372)
T 3cyj_A 142 SYPLRRLQEQLGGWAAAGIPRVKMKVGREPEKDPERVRAAREAI---GESVELMVDANGAYTRKQALYWAGAFARE 214 (372)
T ss_dssp TSCHHHHHHHHHHHHHTTCCEEEEECCSSGGGHHHHHHHHHHHH---CTTSEEEEECTTCSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHHHhh
Confidence 346788999999999999999999874 245678888888864 567999999874 445555555556654
No 342
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=55.63 E-value=48 Score=35.07 Aligned_cols=117 Identities=14% Similarity=0.162 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhhhcCcee-------
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDKIR------- 186 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~~~~kiR------- 186 (706)
+.+..++++.++.+.|...+.+-+...++.+.++.||+.+ -++.|..|-|- ++.-|.. ++.++.+.
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~~~~d~~~v~avR~~~----~~~~l~vDaN~~~~~~~A~~-~~~l~~~~i~~iEeP 223 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIAPGRDRAAIKAVRLRY----PDLAIAADANGSYRPEDAPV-LRQLDAYDLQFIEQP 223 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECBTTBSHHHHHHHHHHC----TTSEEEEECTTCCCGGGHHH-HHHGGGGCCSCEECC
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHC----CCCeEEEECCCCCChHHHHH-HHHHhhCCCcEEECC
Confidence 4899999999999999999999886667888999999875 24889999774 4454554 45566655
Q ss_pred eCCCCCCcchhhcc----------ccccchHHHHHHHhh-----H--H-------hhHHHHHHHHHHcCCeEEEec
Q 005248 187 VNPGNFADRRAQFE----------QLEYTDDEYQKELQH-----I--E-------EVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 187 INPGNig~~~k~F~----------~~~YtdeeY~~El~~-----I--~-------~~f~~vv~~ake~~~~IRIGv 238 (706)
+.|.|+..-+ .+. +..||-.+|.+-++. | + ....++...|+++|+++=+|-
T Consensus 224 ~~~~d~~~~~-~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 298 (388)
T 3qld_A 224 LPEDDWFDLA-KLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWVGG 298 (388)
T ss_dssp SCTTCHHHHH-HHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCcccHHHHH-HHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHCCCeEEecC
Confidence 3466653211 121 233444455443321 1 0 235678999999999985543
No 343
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=55.62 E-value=20 Score=35.69 Aligned_cols=150 Identities=15% Similarity=0.163 Sum_probs=82.0
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccCCC-H-HHHH
Q 005248 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIHFA-P-SVAL 176 (706)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~-~~Al 176 (706)
+.|+-+-=|++. . +. -+..+++|||++|=+-.-. ..-.+.+..||+ .|..+=+ +++-. | ....
T Consensus 57 ~~~~dvhLmv~d-p---~~---~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~----~G~k~gv--~lnp~tp~~~~~ 123 (231)
T 3ctl_A 57 TKPLDCHLMVTR-P---QD---YIAQLARAGADFITLHPETINGQAFRLIDEIRR----HDMKVGL--ILNPETPVEAMK 123 (231)
T ss_dssp CSCEEEEEESSC-G---GG---THHHHHHHTCSEEEECGGGCTTTHHHHHHHHHH----TTCEEEE--EECTTCCGGGGT
T ss_pred CCcEEEEEEecC-H---HH---HHHHHHHcCCCEEEECcccCCccHHHHHHHHHH----cCCeEEE--EEECCCcHHHHH
Confidence 467888888873 2 22 3677889999987544211 112345555555 4654322 33221 1 1222
Q ss_pred HHhhhcCcee---eCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCC
Q 005248 177 RVAECFDKIR---VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253 (706)
Q Consensus 177 ~a~~~~~kiR---INPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygd 253 (706)
.-++.+|-|= +|||- |.. +|.... -++++.+-+..+++|..+.|.|-.| ++.+
T Consensus 124 ~~l~~~D~VlvmsV~pGf-ggQ--~f~~~~-------------l~kI~~lr~~~~~~~~~~~I~VdGG-I~~~------- 179 (231)
T 3ctl_A 124 YYIHKADKITVMTVDPGF-AGQ--PFIPEM-------------LDKLAELKAWREREGLEYEIEVDGS-CNQA------- 179 (231)
T ss_dssp TTGGGCSEEEEESSCTTC-SSC--CCCTTH-------------HHHHHHHHHHHHHHTCCCEEEEESC-CSTT-------
T ss_pred HHHhcCCEEEEeeeccCc-CCc--cccHHH-------------HHHHHHHHHHHhccCCCceEEEECC-cCHH-------
Confidence 2223477664 89984 432 244222 2344556666777777788888544 4332
Q ss_pred ChHHHHHHHHHHHHHHHHCCCCcEEEE----EecCC-hhHHHHHHHHHHH
Q 005248 254 SPRGMVESAFEFARICRKLDFHNFLFS----MKASN-PVVMVQAYRLLVA 298 (706)
Q Consensus 254 t~eamVeSAle~~~i~e~~~f~~iviS----~KaSn-v~~~i~ayrlla~ 298 (706)
.+..|.+.|-+-+|+- .|+.| +...++..|...+
T Consensus 180 -----------~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~~~~ 218 (231)
T 3ctl_A 180 -----------TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQIL 218 (231)
T ss_dssp -----------THHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHHHHH
Confidence 2334455565555553 27767 7777777665433
No 344
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=55.49 E-value=37 Score=36.04 Aligned_cols=68 Identities=19% Similarity=0.322 Sum_probs=51.2
Q ss_pred CCHHHHHHHH-HHHHHcCCCEEEEecCC---------HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhc
Q 005248 115 KDVAGTVEEV-MRIADQGADLVRITVQG---------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECF 182 (706)
Q Consensus 115 ~Dv~atv~Qi-~~L~~aGceiVRvtv~~---------~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~ 182 (706)
.+.+..++++ .++.+.|...+.+-+-. .++.+.++.||+.+ |-++||..|.| |+..-|+..++.+
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~---g~~~~l~vDaN~~~~~~~A~~~~~~L 214 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELL---GPDAVIGFDANNGYSVGGAIRVGRAL 214 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHH---CTTCCEEEECTTCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHH
Confidence 4578899999 99999999999998853 56677777887753 56799999988 4555555555555
Q ss_pred Cce
Q 005248 183 DKI 185 (706)
Q Consensus 183 ~ki 185 (706)
++.
T Consensus 215 ~~~ 217 (393)
T 4dwd_A 215 EDL 217 (393)
T ss_dssp HHT
T ss_pred Hhh
Confidence 544
No 345
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=55.35 E-value=1.2e+02 Score=31.31 Aligned_cols=150 Identities=19% Similarity=0.267 Sum_probs=94.4
Q ss_pred HHHcCCCEEEEe------cCC---------HHHHHHHHHHHHhhccCCcC-cceeeccCC----CHHHHHHHh----hh-
Q 005248 127 IADQGADLVRIT------VQG---------KREADACFEIKNSLVQKNYN-IPLVADIHF----APSVALRVA----EC- 181 (706)
Q Consensus 127 L~~aGceiVRvt------v~~---------~~~A~al~~I~~~L~~~g~~-iPLVADIHF----~~~~Al~a~----~~- 181 (706)
+.++|+|++=+. +.+ .+-....+.|++ +.+ .|+|+|.-| ++.-|++.+ +.
T Consensus 33 ~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r-----~~~~~~vvaD~pfgsy~~~~~a~~~a~rl~kaG 107 (264)
T 1m3u_A 33 FADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRR-----GAPNCLLLADLPFMAYATPEQAFENAATVMRAG 107 (264)
T ss_dssp HHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHH-----HCTTSEEEEECCTTSSSSHHHHHHHHHHHHHTT
T ss_pred HHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHh-----hCCCCcEEEECCCCCcCCHHHHHHHHHHHHHcC
Confidence 457899999663 111 233344556665 566 578999999 566565422 22
Q ss_pred cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE--EEecCCCCCchhHHHhh---CCChH
Q 005248 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV--RIGTNHGSLSDRIMSYY---GDSPR 256 (706)
Q Consensus 182 ~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I--RIGvN~GSL~~~il~ry---gdt~e 256 (706)
++.|-|-=| . .+.+.|+++.+.|+|+ .||.+-=|.... .-| |.| +
T Consensus 108 a~aVklEgg-----~----------------------e~~~~I~al~~agipV~gHiGLtPq~v~~~--ggf~v~grt-~ 157 (264)
T 1m3u_A 108 ANMVKIEGG-----E----------------------WLVETVQMLTERAVPVCGHLGLTPQSVNIF--GGYKVQGRG-D 157 (264)
T ss_dssp CSEEECCCS-----G----------------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHH--TSSCCCCCS-H
T ss_pred CCEEEECCc-----H----------------------HHHHHHHHHHHCCCCeEeeecCCceeeccc--CCeEEEeCC-H
Confidence 555555543 1 3456778888999997 588754333211 112 233 3
Q ss_pred HHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCcccccccccCCCCCCch
Q 005248 257 GMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324 (706)
Q Consensus 257 amVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~g~~G~I 324 (706)
+-.+.+++-++.+++-|-+-|++-+-.+ +..+.++++ .+-|+ +| -=||.+-||-|
T Consensus 158 ~~a~~~i~rA~a~~eAGA~~ivlE~vp~------~~a~~it~~-----l~iP~-ig-IGag~~~dgQv 212 (264)
T 1m3u_A 158 EAGDQLLSDALALEAAGAQLLVLECVPV------ELAKRITEA-----LAIPV-IG-IGAGNVTDGQI 212 (264)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEESCCH------HHHHHHHHH-----CSSCE-EE-ESSCTTSSEEE
T ss_pred HHHHHHHHHHHHHHHCCCcEEEEecCCH------HHHHHHHHh-----CCCCE-EE-eCCCCCCCcce
Confidence 4469999999999999999999988432 335577777 56774 23 23666666654
No 346
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=55.13 E-value=18 Score=38.15 Aligned_cols=68 Identities=16% Similarity=0.164 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEe---cCC---HHHHHHHHHHHHhhccCCcCcceeeccCC----CHHHHHHHhhhcCc
Q 005248 115 KDVAGTVEEVMRIADQGADLVRIT---VQG---KREADACFEIKNSLVQKNYNIPLVADIHF----APSVALRVAECFDK 184 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvt---v~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF----~~~~Al~a~~~~~k 184 (706)
.|.+..++++.++.++|.+.|.+- +-+ ..+.+.+..||+.+ |-++||..|.|- +..-|+..++.+++
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~---G~d~~l~vDan~~~~~~~~~a~~~~~~l~~ 220 (401)
T 2hzg_A 144 DTPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGL---GPDGDLMVDVGQIFGEDVEAAAARLPTLDA 220 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHH---CSSSEEEEECTTTTTTCHHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCCCHHHHHHHHHHHHh
Confidence 478999999999999999999997 432 55677888888753 568999999984 44444444444544
Q ss_pred e
Q 005248 185 I 185 (706)
Q Consensus 185 i 185 (706)
.
T Consensus 221 ~ 221 (401)
T 2hzg_A 221 A 221 (401)
T ss_dssp T
T ss_pred c
Confidence 3
No 347
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=54.89 E-value=27 Score=33.69 Aligned_cols=153 Identities=18% Similarity=0.173 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCC------HHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHhhh-cCceeeCC
Q 005248 118 AGTVEEVMRIADQGADLVRITVQG------KREADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNP 189 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~~------~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~~~-~~kiRINP 189 (706)
...++.++.+.++|++.+-++-++ ...++.+++|++ .+++|+++.--++ +.-+.++++. +|.|=+.-
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~-----~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~ 105 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAE-----RVFIPLTVGGGVRSLEDARKLLLSGADKVSVNS 105 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHT-----TCCSCEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHH-----hCCCCEEEECCcCCHHHHHHHHHcCCCEEEECh
Confidence 345777888999999998887443 133455666665 3789999866655 6666677665 77775532
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcC-CeEEEecCC----CCCchhHHHhhCCChHHHHHHHHH
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG-RAVRIGTNH----GSLSDRIMSYYGDSPRGMVESAFE 264 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~-~~IRIGvN~----GSL~~~il~rygdt~eamVeSAle 264 (706)
.-+.++ +.+. +.++.++ -.|++|+.. |...-.+ .|-. +..-.+.+|
T Consensus 106 ~~l~~p----------------------~~~~---~~~~~~~~~~i~~~~~~~~~~g~~~v~~---~g~~-~~~~~~~~e 156 (252)
T 1ka9_F 106 AAVRRP----------------------ELIR---ELADHFGAQAVVLAIDARWRGDFPEVHV---AGGR-VPTGLHAVE 156 (252)
T ss_dssp HHHHCT----------------------HHHH---HHHHHHCGGGEEEEEEEEEETTEEEEEE---TTTT-EEEEEEHHH
T ss_pred HHHhCc----------------------HHHH---HHHHHcCCCcEEEEEEEecCCCCEEEEE---CCCc-cccCCcHHH
Confidence 222111 1122 3333344 246777753 2100000 1110 001123567
Q ss_pred HHHHHHHCCCCcEEEE-EecCChh--HHHHHHHHHHHhhhcCCCCCcc
Q 005248 265 FARICRKLDFHNFLFS-MKASNPV--VMVQAYRLLVAEMYVHGWDYPL 309 (706)
Q Consensus 265 ~~~i~e~~~f~~iviS-~KaSnv~--~~i~ayrlla~~~~~eg~~YPL 309 (706)
+++.+++.|+.-|++. .+..... .-.+.++.+.+. .+.|+
T Consensus 157 ~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~-----~~ipv 199 (252)
T 1ka9_F 157 WAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEA-----VGVPV 199 (252)
T ss_dssp HHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHH-----CSSCE
T ss_pred HHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHH-----cCCCE
Confidence 7888888999988875 2321110 014555666665 45665
No 348
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=54.86 E-value=73 Score=30.50 Aligned_cols=75 Identities=20% Similarity=0.289 Sum_probs=42.9
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC---CHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHH
Q 005248 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ---GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVAL 176 (706)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~---~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al 176 (706)
.|+.|--|.|. .+ +.+..+.++|++.|=+-.- +....+.++.+++ .| +.+...++ ..... +
T Consensus 69 ~~~~v~l~vnd----~~---~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~----~g--~~ig~~~~p~t~~e~-~ 134 (230)
T 1rpx_A 69 LPLDVHLMIVE----PD---QRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKS----LG--AKAGVVLNPGTPLTA-I 134 (230)
T ss_dssp SCEEEEEESSS----HH---HHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHH----TT--SEEEEEECTTCCGGG-G
T ss_pred CcEEEEEEecC----HH---HHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHH----cC--CcEEEEeCCCCCHHH-H
Confidence 46677777764 22 5777788899999954432 2233345555554 23 55666664 22222 2
Q ss_pred HHh-hhcCce---eeCCC
Q 005248 177 RVA-ECFDKI---RVNPG 190 (706)
Q Consensus 177 ~a~-~~~~ki---RINPG 190 (706)
.+. ..+|-| =++||
T Consensus 135 ~~~~~~~d~vl~~~~~pg 152 (230)
T 1rpx_A 135 EYVLDAVDLVLIMSVNPG 152 (230)
T ss_dssp TTTTTTCSEEEEESSCTT
T ss_pred HHHHhhCCEEEEEEEcCC
Confidence 222 236666 67888
No 349
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=54.76 E-value=27 Score=36.73 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=44.2
Q ss_pred CcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 159 NYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 159 g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
.+++||++|=.+ +..-+..+++ +++-|.|.|..+|.-. ...++++.|+++|+++=
T Consensus 250 ~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit----------------------~~~~ia~~A~~~gi~~~ 307 (393)
T 1wuf_A 250 QLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMS----------------------SALKIAEYCALNEILVW 307 (393)
T ss_dssp TCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHH----------------------HHHHHHHHHHHTTCEEE
T ss_pred hCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHH----------------------HHHHHHHHHHHcCCeEE
Confidence 468999999654 5555555554 4899999999998743 56779999999999985
Q ss_pred Ee
Q 005248 236 IG 237 (706)
Q Consensus 236 IG 237 (706)
+|
T Consensus 308 ~~ 309 (393)
T 1wuf_A 308 CG 309 (393)
T ss_dssp EC
T ss_pred ec
Confidence 54
No 350
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=54.63 E-value=44 Score=34.37 Aligned_cols=94 Identities=9% Similarity=0.052 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHHc-CCCEEEEecCC-HHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhh--hcCceeeCCC
Q 005248 116 DVAGTVEEVMRIADQ-GADLVRITVQG-KREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPG 190 (706)
Q Consensus 116 Dv~atv~Qi~~L~~a-GceiVRvtv~~-~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPG 190 (706)
|.+..++-+++|.+. +..+.=|-=|= .++-+.+..++++ +++||.+|=.+ +..-...+++ +++-+.|.|+
T Consensus 173 ~~~~A~~~~~~l~~~~~~~i~~iEqP~~~~d~~~~~~l~~~-----~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ik~~ 247 (332)
T 2ozt_A 173 DRATANRWFAWLDRHGNGKIEYVEQPLPPDQWQALLSLAQT-----VTTAIALDESVVSAAEVQRWVDRGWPGFFVIKTA 247 (332)
T ss_dssp CHHHHHHHHHHHHHHCCTTEEEEECCSCTTCHHHHHHHHHH-----CSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred CHHHHHHHHHHHHhhccCCcceeECCCCCCCHHHHHHHHHh-----CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEChh
Confidence 344445555555554 22233333221 2334555566654 78999999553 5555555555 3777899998
Q ss_pred CCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHc--CCeEEEecC
Q 005248 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY--GRAVRIGTN 239 (706)
Q Consensus 191 Nig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~--~~~IRIGvN 239 (706)
.+|.- .++.+.|+++ |+++-+|-.
T Consensus 248 ~~GGi-------------------------~~i~~~A~~~~~gi~~~~~~~ 273 (332)
T 2ozt_A 248 LFGDP-------------------------DSLSLLLRRGLEPQRLVFSSA 273 (332)
T ss_dssp HHSCH-------------------------HHHHHHHHTTCCGGGEEEBCC
T ss_pred hhCCH-------------------------HHHHHHHHHhCCCCcEEEeCC
Confidence 88762 2467899999 999988854
No 351
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=54.33 E-value=19 Score=37.64 Aligned_cols=67 Identities=16% Similarity=0.227 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHHHHhhhcCc
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDK 184 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al~a~~~~~k 184 (706)
.|.+..++++.++.+.|...+.+-+-. .++.+.++.||+.+ |-++||..|.|-. ..-|+..++.++.
T Consensus 145 ~~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~---g~~~~l~vDan~~~~~~~A~~~~~~l~~ 216 (377)
T 3my9_A 145 PDFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEF---GERIDLRLDFNQALTPFGAMKILRDVDA 216 (377)
T ss_dssp SSHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---GGGSEEEEECTTCCCTTTHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHh---CCCCeEEEeCCCCcCHHHHHHHHHHHhh
Confidence 467888999999999999999998754 46788888888753 5679999998744 4445544554544
No 352
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=54.14 E-value=1.6e+02 Score=32.00 Aligned_cols=131 Identities=11% Similarity=0.047 Sum_probs=72.5
Q ss_pred HHHHHcCCCEEEEecCCH----H----H----HHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCC
Q 005248 125 MRIADQGADLVRITVQGK----R----E----ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNF 192 (706)
Q Consensus 125 ~~L~~aGceiVRvtv~~~----~----~----A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNi 192 (706)
..++++|.+-|=+..|+. . . .+....+++.|.+.|+.+-+..---|++. .+. -||+
T Consensus 87 e~~a~lG~~~VE~~~~~~~p~~~~~~e~~~~l~~~~~~lk~~l~~~GL~~~~~t~nl~~h~------~y~------~G~~ 154 (438)
T 1a0c_A 87 EFFDKINAPYFCFHDRDIAPEGDTLRETNKNLDTIVAMIKDYLKTSKTKVLWGTANLFSNP------RFV------HGAS 154 (438)
T ss_dssp HHHHHHTCSEEEEEHHHHSCCCSSHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECCCSSSG------GGT------TCST
T ss_pred HHHHHcCCCEEEeccccccccccchhhhhccHHHHHHHHHHHHHHhCCceEeccccccCCC------ccc------cCCC
Confidence 338999999998864332 1 1 23356777777777765544332222211 111 1555
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCCh----HHHHHHHHHHHHH
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP----RGMVESAFEFARI 268 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~----eamVeSAle~~~i 268 (706)
.+.+. + ..++-.+.++.-|+.|++.|.+ .+-+-.|+-.... -++... +-++++--+-++.
T Consensus 155 ~spd~----------e---vR~~ai~~lk~aId~A~~LGa~-~vv~~~G~~G~~~--~~~~~~~~~~~~~~e~L~~~~~~ 218 (438)
T 1a0c_A 155 TSCNA----------D---VFAYSAAQVKKALEITKELGGE-NYVFWGGREGYET--LLNTDMEFELDNFARFLHMAVDY 218 (438)
T ss_dssp TCSCH----------H---HHHHHHHHHHHHHHHHHHTTCS-EEEECCTTSEESC--GGGCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCH----------H---HHHHHHHHHHHHHHHHHHcCCC-EEEEccCCCcccc--CCCCCHHHHHHHHHHHHHHHHHH
Confidence 44321 1 1233345667799999999998 4655556521000 011111 3456666666677
Q ss_pred HHHCCCC-cEEEEEec
Q 005248 269 CRKLDFH-NFLFSMKA 283 (706)
Q Consensus 269 ~e~~~f~-~iviS~Ka 283 (706)
+++.|+. .|.|--|.
T Consensus 219 A~~~Gv~v~l~IEp~p 234 (438)
T 1a0c_A 219 AKEIGFEGQFLIEPKP 234 (438)
T ss_dssp HHHTTCCSEEEECCCS
T ss_pred HHhcCCCcEEEEeeCC
Confidence 8888885 78887763
No 353
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=54.06 E-value=44 Score=35.26 Aligned_cols=68 Identities=15% Similarity=0.176 Sum_probs=51.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhhhcCc
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDK 184 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~~~~k 184 (706)
-.+.+..++++.+..+.|...+.+-+-. .++.+.++.||+. -|-+++|..|.|- +..-|+..++.++.
T Consensus 140 ~~~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a---~g~~~~L~vDaN~~w~~~~A~~~~~~l~~ 211 (379)
T 3r0u_A 140 CGNVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNE---FSKNIKFRFDANQGWNLAQTKQFIEEINK 211 (379)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHH---CCTTSEEEEECTTCCCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHh---cCCCCeEEEeCCCCcCHHHHHHHHHHHhh
Confidence 3567899999999999999999998753 4677788888875 3567999999874 45555555555555
No 354
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=53.92 E-value=27 Score=36.14 Aligned_cols=68 Identities=9% Similarity=0.140 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhhhcCcee
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDKIR 186 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~~~~kiR 186 (706)
.|.+..++++.++.++|.+.+.+-+.-..+.+.++.||+.+ |-++||..|.|- +..- +..++.+++..
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~e~v~avr~~~---g~~~~l~vDan~~~~~~~-~~~~~~l~~~~ 209 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKIEPGWDVEPVRAVRERF---GDDVLLQVDANTAYTLGD-APQLARLDPFG 209 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECBTTBSHHHHHHHHHHH---CTTSEEEEECTTCCCGGG-HHHHHTTGGGC
T ss_pred CCHHHHHHHHHHHHHhCccEEEEecCchhHHHHHHHHHHhc---CCCceEEEeccCCCCHHH-HHHHHHHHhcC
Confidence 37888999999999999999999874456778888888863 567899999873 3333 44444455543
No 355
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=53.58 E-value=41 Score=35.55 Aligned_cols=62 Identities=29% Similarity=0.457 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCEEEE-ecCC--HHHHHHHHHHHHhhccCCc-Ccceee-ccCCCHHHHHHHhhh-cCceee
Q 005248 120 TVEEVMRIADQGADLVRI-TVQG--KREADACFEIKNSLVQKNY-NIPLVA-DIHFAPSVALRVAEC-FDKIRV 187 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRv-tv~~--~~~A~al~~I~~~L~~~g~-~iPLVA-DIHF~~~~Al~a~~~-~~kiRI 187 (706)
+.+++.++.++|++.|=+ +.++ ....+.++.|++. + ++|+++ +++ ++..|..+.++ +|-|-+
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~-----~~~~pviv~~v~-~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK-----YPNLDLIAGNIV-TKEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-----CTTCEEEEEEEC-SHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH-----CCCCeEEEcCCC-cHHHHHHHHhcCCCEEEE
Confidence 467788899999999877 2233 2345667777775 4 689995 666 47888888887 999988
No 356
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=53.44 E-value=16 Score=37.45 Aligned_cols=81 Identities=23% Similarity=0.263 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHH
Q 005248 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFS 221 (706)
Q Consensus 143 ~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~ 221 (706)
...+.|+.+.++|.+.|+.+-|--| =++.....|.+. ++.|=+--|.|++. |++.+-++||++|.+
T Consensus 111 ~~~~~l~~~i~~L~~~GIrVSLFID--pd~~qi~aA~~~GA~~IELhTG~Ya~a--------~~~~~~~~el~~i~~--- 177 (243)
T 1m5w_A 111 GQRDKMRDACKRLADAGIQVSLFID--ADEEQIKAAAEVGAPFIEIHTGCYADA--------KTDAEQAQELARIAK--- 177 (243)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEEEEC--SCHHHHHHHHHTTCSEEEEECHHHHHC--------CSHHHHHHHHHHHHH---
T ss_pred hhHHHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHhCcCEEEEechhhhcC--------CCchhHHHHHHHHHH---
Confidence 4567788888888888999988887 345555556665 89999999999873 334455678887766
Q ss_pred HHHHHHHHcCCeEEEecCCC
Q 005248 222 PLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 222 ~vv~~ake~~~~IRIGvN~G 241 (706)
-.+.|.+.|. |||.|
T Consensus 178 -aa~~A~~lGL----~VnAG 192 (243)
T 1m5w_A 178 -AATFAASLGL----KVNAG 192 (243)
T ss_dssp -HHHHHHHTTC----EEEEE
T ss_pred -HHHHHHHcCC----EEecC
Confidence 7789999995 66766
No 357
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=53.20 E-value=39 Score=35.78 Aligned_cols=65 Identities=11% Similarity=0.107 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHcCCCEEEE-ecC-----CHHHHHHHHHHHHhhccCCcCcceeeccCC---CHHHHHHHhhhcCcee
Q 005248 119 GTVEEVMRIADQGADLVRI-TVQ-----GKREADACFEIKNSLVQKNYNIPLVADIHF---APSVALRVAECFDKIR 186 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRv-tv~-----~~~~A~al~~I~~~L~~~g~~iPLVADIHF---~~~~Al~a~~~~~kiR 186 (706)
...+++.++.+.|...+.+ -+- -.++.+.++.||+. -|-++||..|.|- +..-|+..++.+++..
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a---~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~ 233 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGI---LGHDTDMMVDYLYRFTDWYEVARLLNSIEDLE 233 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHH---HCSSSEEEEECTTCCCCHHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHH---hCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcC
Confidence 6667999999999999999 554 24567788888875 3567999999984 5566777777776653
No 358
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=52.58 E-value=42 Score=35.81 Aligned_cols=65 Identities=20% Similarity=0.255 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC---CHHHHHHHHHHHHhhccCCcCcceee-ccCCCHHHHHHHhhh-cCceee
Q 005248 118 AGTVEEVMRIADQGADLVRITVQ---GKREADACFEIKNSLVQKNYNIPLVA-DIHFAPSVALRVAEC-FDKIRV 187 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~---~~~~A~al~~I~~~L~~~g~~iPLVA-DIHF~~~~Al~a~~~-~~kiRI 187 (706)
+.+.+.+.++.++|+++|=+.++ .....+.++.||+.. -++|+++ .+ .++..|..++++ +|.|-+
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~----~~~~Vi~G~V-~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLL----GSRCIMAGNV-ATYAGADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHH----TTCEEEEEEE-CSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhc----CCCeEEEcCc-CCHHHHHHHHHcCCCEEEE
Confidence 56788899999999999877433 233345677777741 2689999 66 478889999987 999997
No 359
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=52.17 E-value=45 Score=34.38 Aligned_cols=151 Identities=12% Similarity=0.164 Sum_probs=72.0
Q ss_pred HHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCc-ceeeccCC-CHHHHHHHhhhcCceeeCCCCCCcchhhc
Q 005248 122 EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNI-PLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQF 199 (706)
Q Consensus 122 ~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~i-PLVADIHF-~~~~Al~a~~~~~kiRINPGNig~~~k~F 199 (706)
+=++.|.++|| .+.|-+..||..+.+ .|++- +++---.+ .+.-...|++. .+++ + ++-+.
T Consensus 54 ~v~~~l~~~G~---g~~vas~~E~~~~~~-------~G~~~~~I~~~~~~k~~~~l~~a~~~--~v~~-~-~vds~---- 115 (372)
T 2nva_A 54 VLLKTMCDKNV---NFDCASSSEIKKVIQ-------IGVSPSRIIFAHTMKTIDDLIFAKDQ--GVDI-A-TFDSS---- 115 (372)
T ss_dssp HHHHHHHHTTC---EEEECSHHHHHHHHH-------HTCCGGGEEECCSCCCHHHHHHHHHH--TCCE-E-EECSH----
T ss_pred HHHHHHHHcCC---cEEEcCHHHHHHHHH-------cCCCHHHEEECCCCCCHHHHHHHHHC--CCCE-E-EeCCH----
Confidence 44456778896 789999999887764 26654 34433332 33444444443 1221 1 33221
Q ss_pred cccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEE
Q 005248 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF 279 (706)
Q Consensus 200 ~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~ivi 279 (706)
+|+++|. +.+++.++.+||-+..+.-.-+..+|+|-+++.. .+.++.+.+.+++=.=|
T Consensus 116 -----------~~l~~l~-------~~~~~~~v~lrv~~~~~~~~~~~~~R~G~~~~~~----~~~~~~~~~~~l~~~Gl 173 (372)
T 2nva_A 116 -----------FELDKIH-------TYHPNCKMILRIRCDDPNATVQLGNKFGANEDEI----RHLLEYAKQLDIEVIGI 173 (372)
T ss_dssp -----------HHHHHHH-------HHCTTCEEEEEBCCCCTTCSBCCTTTSSBCGGGH----HHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHH-------HhCCCCeEEEEEecCCCCCcccCCCCCCCCHHHH----HHHHHHHHHcCCeEEEE
Confidence 2333333 3344455666665543110011238899656542 33445555555432222
Q ss_pred EEe--c--CChhHHH---HHHHHHHHhhhcCCCCCc-cccc
Q 005248 280 SMK--A--SNPVVMV---QAYRLLVAEMYVHGWDYP-LHLG 312 (706)
Q Consensus 280 S~K--a--Snv~~~i---~ayrlla~~~~~eg~~YP-LHLG 312 (706)
..= + .|+.... +..+.+.+++.+.|.+.+ +|+|
T Consensus 174 ~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~G 214 (372)
T 2nva_A 174 SFHVGSGSRNPEAYYRAIKSSKEAFNEAISVGHKPYILDIG 214 (372)
T ss_dssp ECCCCBSBCCHHHHHHHHHHHHHHHHHHHHHTCCCCEEECC
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeC
Confidence 221 1 2333333 333444455555565544 5553
No 360
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=52.07 E-value=88 Score=32.66 Aligned_cols=101 Identities=12% Similarity=0.074 Sum_probs=63.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCH-HH----------HHHHHHHHHhhccCCcCcceeecc--CC--CHHHHHHH
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQGK-RE----------ADACFEIKNSLVQKNYNIPLVADI--HF--APSVALRV 178 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~~-~~----------A~al~~I~~~L~~~g~~iPLVADI--HF--~~~~Al~a 178 (706)
...++.-++=+.+|.++|.+.+=+..+.. .+ .+.+..|++ + .+..+.....- ++ |-+-+..|
T Consensus 20 ~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~-~--~~~~~~~L~r~~~~~~~dv~~~~~a 96 (320)
T 3dxi_A 20 DFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRN-I--STKKIAIMLNEKNTTPEDLNHLLLP 96 (320)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHH-H--CCSEEEEEEEGGGCCGGGHHHHHGG
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhh-c--cCCeEEEEecCCCCChhhHHHHHHh
Confidence 35677778888899999999999996421 11 467777776 2 34444433221 11 22333444
Q ss_pred hhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCC
Q 005248 179 AEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (706)
Q Consensus 179 ~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~ 240 (706)
.+. ++-+||- +... + -+++.++++.||++|..++..+-.
T Consensus 97 ~~~Gvd~~ri~-----~~~~--------------n----le~~~~~v~~ak~~G~~v~~~~~~ 136 (320)
T 3dxi_A 97 IIGLVDMIRIA-----IDPQ--------------N----IDRAIVLAKAIKTMGFEVGFNVMY 136 (320)
T ss_dssp GTTTCSEEEEE-----ECGG--------------G----HHHHHHHHHHHHTTTCEEEEEECC
T ss_pred hhcCCCEEEEE-----ecHH--------------H----HHHHHHHHHHHHHCCCEEEEEEEe
Confidence 444 8888875 1110 0 235778999999999999877643
No 361
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=51.86 E-value=55 Score=32.17 Aligned_cols=137 Identities=16% Similarity=0.236 Sum_probs=78.6
Q ss_pred CCCCCHHHHHHHHHHHHHcC--CCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC--HH----HHHHHhhh-c
Q 005248 112 NDTKDVAGTVEEVMRIADQG--ADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PS----VALRVAEC-F 182 (706)
Q Consensus 112 t~T~Dv~atv~Qi~~L~~aG--ceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~----~Al~a~~~-~ 182 (706)
-|..|.+..++. +.++| ++.+-+-++=.. +.- +.+.+.|++. ..+++.|.||- |+ .+..++++ +
T Consensus 10 lD~~~l~~~~~~---~~~~~~~v~~~Kv~~d~~~-~~G-~~~v~~l~~~--~~~v~lD~kl~Dip~t~~~~~~~~~~~Ga 82 (239)
T 1dbt_A 10 LDFASAEETLAF---LAPFQQEPLFVKVGMELFY-QEG-PSIVKQLKER--NCELFLDLKLHDIPTTVNKAMKRLASLGV 82 (239)
T ss_dssp CCCSSHHHHHHH---TGGGTTSCCEEEECHHHHH-HHT-HHHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHHTTTC
T ss_pred eCCCCHHHHHHH---HHHhcccCcEEEECHHHHH-HhC-HHHHHHHHHC--CCcEEEEeccccchHHHHHHHHHHHhcCC
Confidence 355566554443 34445 366444433221 111 1223334444 46788899997 54 33355565 7
Q ss_pred CceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHc---CC--eEEEecCCC-CCchhHH-HhhC-CC
Q 005248 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY---GR--AVRIGTNHG-SLSDRIM-SYYG-DS 254 (706)
Q Consensus 183 ~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~---~~--~IRIGvN~G-SL~~~il-~ryg-dt 254 (706)
|-|=++|- .|. +-+.++++.++++ |. |.=+||+-- |.+..-+ +.++ +.
T Consensus 83 d~vtvH~~-~g~-----------------------~~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~~~~~l~~~~~~~~ 138 (239)
T 1dbt_A 83 DLVNVHAA-GGK-----------------------KMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEK 138 (239)
T ss_dssp SEEEEEGG-GCH-----------------------HHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBCS
T ss_pred CEEEEeCc-CCH-----------------------HHHHHHHHHHHhhhccCCCCccEEEEEEcCCCCHHHHHHHhccCC
Confidence 88877772 121 1345678888888 76 545787765 6665556 6554 21
Q ss_pred hHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 255 PRGMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 255 ~eamVeSAle~~~i~e~~~f~~iviS~ 281 (706)
.+++..+...+...+.|+.-+|.|.
T Consensus 139 --~~~d~Vl~ma~~~~~~G~~g~v~~~ 163 (239)
T 1dbt_A 139 --SLIDTVVHYSKQAEESGLDGVVCSV 163 (239)
T ss_dssp --CHHHHHHHHHHHHHHTTCSEEECCG
T ss_pred --CHHHHHHHHHHHHHHhCCCEEEECH
Confidence 2345556666667889998887775
No 362
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=51.81 E-value=35 Score=36.48 Aligned_cols=68 Identities=13% Similarity=0.281 Sum_probs=50.2
Q ss_pred CH-HHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCcee
Q 005248 116 DV-AGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (706)
Q Consensus 116 Dv-~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiR 186 (706)
+. +..++++.++.++|.+.|.+-+-. ..+.+.++.||+.+ |-++||..|.| |+..-|+..++.+++..
T Consensus 184 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v~avR~av---G~d~~l~vDan~~~~~~eai~~~~~L~~~~ 256 (428)
T 3bjs_A 184 QPKESLAEEAQEYIARGYKALKLRIGDAARVDIERVRHVRKVL---GDEVDILTDANTAYTMADARRVLPVLAEIQ 256 (428)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHHHHHHHHH---CTTSEEEEECTTCCCHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHhc---CCCCEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 44 888999999999999999997763 44567777777753 56899999987 45555555555565543
No 363
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=51.30 E-value=31 Score=36.54 Aligned_cols=210 Identities=17% Similarity=0.180 Sum_probs=118.9
Q ss_pred eEEEceeecCCCCceEEEeccCCCCCC---HHHHHHHHHHHHHcCCCEE-----EEe-----------cCCHHHHHHHHH
Q 005248 90 TVMVGNVAIGSEHPIRVQTMTTNDTKD---VAGTVEEVMRIADQGADLV-----RIT-----------VQGKREADACFE 150 (706)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~D---v~atv~Qi~~L~~aGceiV-----Rvt-----------v~~~~~A~al~~ 150 (706)
.+++|++.+ .|.|+.-.||.....| .+..++--.+.++ |+-+| -+. .-+.+..+.+++
T Consensus 19 P~~ig~~~l--~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~-g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~ 95 (376)
T 1icp_A 19 PCKMGKFEL--CHRVVLAPLTRQRSYGYIPQPHAILHYSQRST-NGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKP 95 (376)
T ss_dssp CEEETTEEE--SCSEEECCCCCCCCGGGSCCHHHHHHHHHTCC-TTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHH
T ss_pred CeeECCEEE--CCccEECCcCcCcCCCCCCCHHHHHHHHHhcC-CeeEEEECceeeccccccCcccCccCCHHHHHHHHH
Confidence 478888888 6899999998765333 2333333334333 55554 222 114566678888
Q ss_pred HHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcc---------hhhc-cccccchHHHHHHHhhHHhhH
Q 005248 151 IKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR---------RAQF-EQLEYTDDEYQKELQHIEEVF 220 (706)
Q Consensus 151 I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~---------~k~F-~~~~YtdeeY~~El~~I~~~f 220 (706)
+.+...+.|. ++++=++--.+.+......-..--+-|-.+-.. ...| ...+.|.+ |++.+.+.|
T Consensus 96 l~~avh~~G~--~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~----eI~~~i~~f 169 (376)
T 1icp_A 96 IVDAVHAKGG--IFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTD----EIPQIVNEF 169 (376)
T ss_dssp HHHHHHHTTC--EEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTT----THHHHHHHH
T ss_pred HHHHHHhcCC--eEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHH----HHHHHHHHH
Confidence 8877777775 555554433333211100000000112111110 0001 12344544 566777888
Q ss_pred HHHHHHHHHcCC-eEEEecCCCCCchhHH--------HhhCCChHHHHHHHHHHHHHHHH-CCCCcEEEEEecCC-----
Q 005248 221 SPLVEKCKKYGR-AVRIGTNHGSLSDRIM--------SYYGDSPRGMVESAFEFARICRK-LDFHNFLFSMKASN----- 285 (706)
Q Consensus 221 ~~vv~~ake~~~-~IRIGvN~GSL~~~il--------~rygdt~eamVeSAle~~~i~e~-~~f~~iviS~KaSn----- 285 (706)
..-.+.|++.|- .|-|=.-||-|=+.++ .+||.+.+.=..-++|-++-+++ .|- + .|++|-|-
T Consensus 170 ~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~-~-~V~vrls~~~~~~ 247 (376)
T 1icp_A 170 RVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGS-D-RVGIRISPFAHYN 247 (376)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCG-G-GEEEEECTTCCTT
T ss_pred HHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcC-C-ceEEEeccccccC
Confidence 888888999885 7888777888765555 56776655555556666654433 453 3 56777762
Q ss_pred ---hhHHHHHHHHHHHhhhcCCCCCcccc
Q 005248 286 ---PVVMVQAYRLLVAEMYVHGWDYPLHL 311 (706)
Q Consensus 286 ---v~~~i~ayrlla~~~~~eg~~YPLHL 311 (706)
-....+-+..|++++++.|.+| ||+
T Consensus 248 g~~~~~~~~~~~~la~~le~~Gvd~-i~v 275 (376)
T 1icp_A 248 EAGDTNPTALGLYMVESLNKYDLAY-CHV 275 (376)
T ss_dssp TCCCSCHHHHHHHHHHHHGGGCCSE-EEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCE-EEE
Confidence 1234556777888888888886 554
No 364
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=51.29 E-value=51 Score=34.26 Aligned_cols=55 Identities=9% Similarity=0.033 Sum_probs=40.9
Q ss_pred cceeeccCCC-HHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec
Q 005248 162 IPLVADIHFA-PSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (706)
Q Consensus 162 iPLVADIHF~-~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv 238 (706)
+||++|=.+. ..-+..+..+++-|.|.|..+|.-. ...++++.|+++|+++=+|.
T Consensus 243 ipIa~dE~~~~~~~~~~~~~a~d~i~ik~~~~GGit----------------------~~~~i~~~A~~~gi~~~~~~ 298 (372)
T 3cyj_A 243 VAIAAGEYEWTLPQLHDLAGCVDILQADVTRCGGIT----------------------GLLRVDGICRGHQIPFSAHC 298 (372)
T ss_dssp CEEEECTTCCSHHHHHHHHTTCSEEEECTTTTTHHH----------------------HHTTHHHHHHHHTCCEEECS
T ss_pred CCEECCCCccCHHHHHHHhCCCCEEecCchhhCCHH----------------------HHHHHHHHHHHcCCeecccc
Confidence 7999996654 2223333446999999999998733 44568999999999987764
No 365
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=51.08 E-value=83 Score=29.82 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=50.7
Q ss_pred EEEecCCHHHHHHHHHHHHhhccCCcCcceeecc-CCCHHHHH-HHhhhc-CceeeCCC----CCCcchhhccccccchH
Q 005248 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADI-HFAPSVAL-RVAECF-DKIRVNPG----NFADRRAQFEQLEYTDD 207 (706)
Q Consensus 135 VRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADI-HF~~~~Al-~a~~~~-~kiRINPG----Nig~~~k~F~~~~Ytde 207 (706)
||+.+|...-.+.++.+++. |+++=|..+. |+++...+ +..+.+ ..+-+..+ |+++. |+
T Consensus 3 ~~~~~p~~~l~~~l~~~~~~----G~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~~----------~~ 68 (254)
T 3ayv_A 3 VRLAFPLSRAEEALPRLQAL----GLGAEVYLDPALLEEDALFQSLRRRFSGKLSVHLPFWNLDLLSP----------DP 68 (254)
T ss_dssp EEEEEEGGGHHHHHHHHHHH----TCEEEEECCGGGTTCHHHHHHHHHHCCSCEEEECCCTTCCTTCS----------SH
T ss_pred ccccCCHHHHHHHHHHHHhc----CCCEEEeccccccCcHHHHHHHHHHhCCCeEEecCccCCCCCCC----------CH
Confidence 57788888777888888775 8876554442 45543122 222223 23433322 33331 11
Q ss_pred HHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCC
Q 005248 208 EYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (706)
Q Consensus 208 eY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL 243 (706)
+..++..+.++..++.|++.|.+. |-+..|..
T Consensus 69 ---~~r~~~~~~~~~~i~~A~~lGa~~-v~~~~g~~ 100 (254)
T 3ayv_A 69 ---EVRGLTLRRLLFGLDRAAELGADR-AVFHSGIP 100 (254)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHTTCSE-EEEECCCC
T ss_pred ---HHHHHHHHHHHHHHHHHHHhCCCE-EEECCCCC
Confidence 123334456777999999999873 44444544
No 366
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=50.74 E-value=21 Score=35.90 Aligned_cols=63 Identities=17% Similarity=0.296 Sum_probs=49.0
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNi 192 (706)
|.+|.+...+|||++|= .|+. ..+-++.+++ +.+|++.++. +|.=++.|.+. +|-|-+-|.+.
T Consensus 95 t~~~a~~Ai~AGA~fIv--sP~~-~~~vi~~~~~------~gi~~ipGv~-TptEi~~A~~~Gad~vK~FPa~~ 158 (232)
T 4e38_A 95 NGEQALAAKEAGATFVV--SPGF-NPNTVRACQE------IGIDIVPGVN-NPSTVEAALEMGLTTLKFFPAEA 158 (232)
T ss_dssp SHHHHHHHHHHTCSEEE--CSSC-CHHHHHHHHH------HTCEEECEEC-SHHHHHHHHHTTCCEEEECSTTT
T ss_pred CHHHHHHHHHcCCCEEE--eCCC-CHHHHHHHHH------cCCCEEcCCC-CHHHHHHHHHcCCCEEEECcCcc
Confidence 57899999999999993 3442 2334444454 5799999987 89999999997 99999999764
No 367
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=50.74 E-value=41 Score=31.91 Aligned_cols=54 Identities=15% Similarity=0.200 Sum_probs=41.0
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCC-EEEEecCCHHHHHHHHHHHHhhccCCc--CcceeeccC
Q 005248 110 TTNDTKDVAGTVEEVMRIADQGAD-LVRITVQGKREADACFEIKNSLVQKNY--NIPLVADIH 169 (706)
Q Consensus 110 t~t~T~Dv~atv~Qi~~L~~aGce-iVRvtv~~~~~A~al~~I~~~L~~~g~--~iPLVADIH 169 (706)
|.+-|..+.+-.+...++.+.|++ ++=|++++...-++..+=. +. ++||++|-+
T Consensus 55 Tp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~------~~~~~f~lLSD~~ 111 (171)
T 2xhf_A 55 VPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTV------DPEHKIRMLADMH 111 (171)
T ss_dssp CTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHH------CTTCCSEEEECTT
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhc------CCCCCeEEEEeCC
Confidence 344456666667888899999998 9999999998877765422 34 799999944
No 368
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=50.42 E-value=36 Score=36.00 Aligned_cols=64 Identities=13% Similarity=0.204 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHcCCCEEEE-ecC-----CHHHHHHHHHHHHhhccCCcCcceeeccCC---CHHHHHHHhhhcCce
Q 005248 119 GTVEEVMRIADQGADLVRI-TVQ-----GKREADACFEIKNSLVQKNYNIPLVADIHF---APSVALRVAECFDKI 185 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRv-tv~-----~~~~A~al~~I~~~L~~~g~~iPLVADIHF---~~~~Al~a~~~~~ki 185 (706)
...+++.+..+.|...+.+ -+. -.++.+.++.||+. -|-++||..|.|- +..-|+..++.+++.
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a---~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~ 227 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREV---IGWDMDMMVDCLYRWTDWQKARWTFRQLEDI 227 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHH---HCSSSEEEEECTTCCSCHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHH---hCCCCeEEEECCCCCCCHHHHHHHHHHHhhc
Confidence 6667999999999999999 554 24567778888875 3667999999984 556677777777665
No 369
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=50.38 E-value=52 Score=35.08 Aligned_cols=160 Identities=20% Similarity=0.294 Sum_probs=87.7
Q ss_pred HHHHHHHHHcCCCEEEEe-cCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCC----CCCCcc
Q 005248 121 VEEVMRIADQGADLVRIT-VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP----GNFADR 195 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvt-v~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINP----GNig~~ 195 (706)
+.....|+.+|+|+|=.+ +.++ ++.+..| .+..+++|+++|.|--...+....+.++-||.-. ||+..-
T Consensus 86 ~~e~qilea~GaD~Id~s~~l~p--~d~~~~i----~k~~~~~~~~~~a~~lgea~r~~~~Ga~~i~t~ge~g~~~~ve~ 159 (330)
T 2yzr_A 86 TTEALVLEAIGVDMIDESEVLTQ--ADPFFHI----YKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEA 159 (330)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCC--SCSSCCC----CGGGCSSCEEEECSSHHHHHHHHHHTCSEEEECCCTTSCCTHHH
T ss_pred hHHHHHHHHcCCCEEehhccCCH--HHHHHHh----hhhhcccchhhccccHHHHHHHHhcCcceeeccCCCCcccchhH
Confidence 455666777999999432 1222 2222233 2336899999999987777766655699999988 777542
Q ss_pred hh---h-----ccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCch-----------------hHHHh
Q 005248 196 RA---Q-----FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD-----------------RIMSY 250 (706)
Q Consensus 196 ~k---~-----F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~-----------------~il~r 250 (706)
-+ + -....|+++|..+.-++....+.+++...++ .||+|..-|.- +++.+
T Consensus 160 v~H~r~~~~~~~~~s~~~~~El~~~A~~~gadyv~~~~~vt~-----~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~ 234 (330)
T 2yzr_A 160 VRHMRLMNEAIAQLQRMTDEEVYGVAKFYANRYAELAKTVRE-----GMGLPATVLENEPIYEGFTLAEIIDGLYEVLLE 234 (330)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHGGGGHHHHHHHH-----HTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHcCCCEeecccchhh-----hccccccccccccccCCCcccCCCcchHHHHHH
Confidence 00 0 0112344555322222222222111111111 23443322211 11111
Q ss_pred h-------------C--CChHHHHHHHHHHHHHHHHCCCCcEEEE---EecCChhHHHHHHHHHHHh
Q 005248 251 Y-------------G--DSPRGMVESAFEFARICRKLDFHNFLFS---MKASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 251 y-------------g--dt~eamVeSAle~~~i~e~~~f~~iviS---~KaSnv~~~i~ayrlla~~ 299 (706)
. | .|| +.+..+.+.|.+-+.|. ||+.||..+.+++....+.
T Consensus 235 i~~~~~IPVV~VAeGGI~Tp--------eda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~ 293 (330)
T 2yzr_A 235 VKKLGRLPVVNFAAGGVATP--------ADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYN 293 (330)
T ss_dssp HHHHTSCSSEEEECSCCCSH--------HHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT
T ss_pred HHHhCCCCeEEEEECCCCCH--------HHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHh
Confidence 1 1 122 34555666799888775 8999999999998888776
No 370
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=50.13 E-value=52 Score=34.34 Aligned_cols=68 Identities=16% Similarity=0.248 Sum_probs=52.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhc--Cce
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECF--DKI 185 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~~---~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~--~ki 185 (706)
..+.+..++++.++.+.|...+.+-+-.. ++.+.++.||+.+ + +++|..|.| |++.-|+..++.+ +.+
T Consensus 141 ~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~---~-~~~l~vDaN~~~~~~~A~~~~~~L~~~~~ 215 (365)
T 3ik4_A 141 AGDEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAA---P-TAPLIVDGNCGYDVERALAFCAACKAESI 215 (365)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHS---S-SCCEEEECTTCCCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhC---C-CCeEEEECCCCCCHHHHHHHHHHHhhCCC
Confidence 45789999999999999999999988654 7888888888874 2 479999987 4555555555556 544
No 371
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=50.11 E-value=82 Score=32.95 Aligned_cols=136 Identities=13% Similarity=0.219 Sum_probs=80.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHH--HHHHHHHHHhhccCCcCcceeeccCCC--HHHHH----HHhhh-c
Q 005248 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGKRE--ADACFEIKNSLVQKNYNIPLVADIHFA--PSVAL----RVAEC-F 182 (706)
Q Consensus 112 t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~--A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al----~a~~~-~ 182 (706)
-|..|.+..++=+.++. -.+..+-+-++-... .+.++.|++ . ...++++|.||. |+-.. .+++. +
T Consensus 31 LD~~~~~eal~l~~~l~-~~v~~vKVG~~lf~~~G~~~V~~Lk~----~-~g~~IflDlKl~DIpnTv~~av~~~a~lGa 104 (303)
T 3ru6_A 31 LDLSTKEECLQLAKELK-NLDIWLKVGLRAYLRDGFKFIEELKK----V-DDFKIFLDLKFHDIPNTMADACEEVSKLGV 104 (303)
T ss_dssp CCCSSHHHHHHHHHHTT-TSSCEEEECHHHHHHHTHHHHHHHHH----H-CCCEEEEEEEECSCHHHHHHHHHHHHTTTC
T ss_pred eCCCCHHHHHHHHHHhC-CCccEEEeCHHHHHHhCHHHHHHHHH----h-hCCCEEEEeeeccCchhHHHHHHHHHhcCC
Confidence 45566666555554442 234455554333211 233444444 2 368999999997 54433 33343 7
Q ss_pred CceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC-eEEEec-CCCCCchhHHHh-hCCChHHHH
Q 005248 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR-AVRIGT-NHGSLSDRIMSY-YGDSPRGMV 259 (706)
Q Consensus 183 ~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~-~IRIGv-N~GSL~~~il~r-ygdt~eamV 259 (706)
|-+=++| ++.. +-++++++.+++++. |.=+|| -.-|.+..-+.. +. ..+-
T Consensus 105 D~vTVHa--~~G~----------------------~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~---~~~~ 157 (303)
T 3ru6_A 105 DMINIHA--SAGK----------------------IAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYR---QKIE 157 (303)
T ss_dssp SEEEEEG--GGCH----------------------HHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHS---SCHH
T ss_pred CEEEEec--cCCH----------------------HHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHc---CCHH
Confidence 7777777 3332 256788888888874 444675 344565443332 32 3456
Q ss_pred HHHHHHHHHHHHCCCCcEEEE
Q 005248 260 ESAFEFARICRKLDFHNFLFS 280 (706)
Q Consensus 260 eSAle~~~i~e~~~f~~iviS 280 (706)
+.+++.++.+.+.|.+-+|-|
T Consensus 158 e~V~~lA~~a~~~G~dGvV~s 178 (303)
T 3ru6_A 158 EAVINFSKISYENGLDGMVCS 178 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEC
Confidence 778889999999999887764
No 372
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=49.84 E-value=33 Score=33.15 Aligned_cols=90 Identities=17% Similarity=0.103 Sum_probs=55.8
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHhhh-cCceeeCCCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~~------~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~~~-~~kiRINPGN 191 (706)
+++.++++.++|++.|=++.-+.. .-+.+++|++. +++|+||+--.+ +.-+.++.+. ++.+=+-=+=
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~-----~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal 227 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-----TTLPIIASGGAGKMEHFLEAFLAGADAALAASVF 227 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGG-----CCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHh-----cCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHH
Confidence 456678888999998877642211 24566666653 589999987655 4555455454 5555332111
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
+..+ ..+.+.++.+++.|+++|.
T Consensus 228 ~~~~----------------------~~~~~~~~~l~~~g~~~~~ 250 (253)
T 1thf_D 228 HFRE----------------------IDVRELKEYLKKHGVNVRL 250 (253)
T ss_dssp HTTC----------------------SCHHHHHHHHHHTTCCCCC
T ss_pred HcCC----------------------CCHHHHHHHHHHcCCcccc
Confidence 1110 0356677888999999985
No 373
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=49.76 E-value=96 Score=31.42 Aligned_cols=152 Identities=11% Similarity=0.067 Sum_probs=88.0
Q ss_pred HHHcCCCEEEEec---------CC------HHHHHHHHHHHHhhccCCcCcceeeccCCCHHH-----HHHHhhh-cCce
Q 005248 127 IADQGADLVRITV---------QG------KREADACFEIKNSLVQKNYNIPLVADIHFAPSV-----ALRVAEC-FDKI 185 (706)
Q Consensus 127 L~~aGceiVRvtv---------~~------~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~-----Al~a~~~-~~ki 185 (706)
+.++|++.+=++- || .+-....+.|.+ +.++|||+|+-|-|.- +...++. ++.|
T Consensus 36 ~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r-----~~~~pviaD~~~Gyg~~~~~~~~~l~~aGa~gv 110 (255)
T 2qiw_A 36 VEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITS-----AVSIPVSVDVESGYGLSPADLIAQILEAGAVGI 110 (255)
T ss_dssp HHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHH-----HCSSCEEEECTTCTTCCHHHHHHHHHHTTCCEE
T ss_pred HHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHh-----cCCCCEEeccCCCcCcHHHHHHHHHHHcCCcEE
Confidence 4457777776651 11 133445556665 4779999999988632 2222333 6667
Q ss_pred eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHH
Q 005248 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265 (706)
Q Consensus 186 RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~ 265 (706)
-|-=|-... .| ..++-+|+ -++++.+++.+++.|+|++|=.-.+++ +.-.++..++ .+.+++-
T Consensus 111 ~iEd~~~~~-~k----~l~~~~e~-------~~~I~a~~~a~~~~g~~~~v~aRtd~~----~~g~~~~~~~-~~~ai~r 173 (255)
T 2qiw_A 111 NVEDVVHSE-GK----RVREAQEH-------ADYIAAARQAADVAGVDVVINGRTDAV----KLGADVFEDP-MVEAIKR 173 (255)
T ss_dssp EECSEEGGG-TT----EECCHHHH-------HHHHHHHHHHHHHHTCCCEEEEEECHH----HHCTTTSSSH-HHHHHHH
T ss_pred EECCCCCCC-CC----cccCHHHH-------HHHHHHHHHHHHhcCCCeEEEEEechh----hccCCcchHH-HHHHHHH
Confidence 666553111 11 12222233 345666777777779996554433332 1111222333 5889999
Q ss_pred HHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCccc
Q 005248 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLH 310 (706)
Q Consensus 266 ~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLH 310 (706)
++.+++-|-+-|++-+-.| .+-.+.++++ .+.|+-
T Consensus 174 a~a~~eAGAd~i~~e~~~~-----~~~~~~i~~~-----~~~P~n 208 (255)
T 2qiw_A 174 IKLMEQAGARSVYPVGLST-----AEQVERLVDA-----VSVPVN 208 (255)
T ss_dssp HHHHHHHTCSEEEECCCCS-----HHHHHHHHTT-----CSSCBE
T ss_pred HHHHHHcCCcEEEEcCCCC-----HHHHHHHHHh-----CCCCEE
Confidence 9999999999999966422 2334566666 678985
No 374
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=49.60 E-value=2.5e+02 Score=29.38 Aligned_cols=208 Identities=15% Similarity=0.119 Sum_probs=127.8
Q ss_pred eEEEceeecCCCCceEEEeccCCCCC-C---HHHHHHHHHHHHHcCCCEEEEe----------------cCCHHHHHHHH
Q 005248 90 TVMVGNVAIGSEHPIRVQTMTTNDTK-D---VAGTVEEVMRIADQGADLVRIT----------------VQGKREADACF 149 (706)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~-D---v~atv~Qi~~L~~aGceiVRvt----------------v~~~~~A~al~ 149 (706)
.+++|++.+ -|-|+.-.||+.... | .+..++--.+.++-|+-+|=.- .-+.+..+.++
T Consensus 7 P~~ig~~~l--~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~ 84 (343)
T 3kru_A 7 PLKIKDITI--KNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELK 84 (343)
T ss_dssp CEEETTEEE--SSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHH
T ss_pred cceeeeeee--eeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHH
Confidence 478888887 689999999876543 2 5667777778888777776321 12557788999
Q ss_pred HHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHH
Q 005248 150 EIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKK 229 (706)
Q Consensus 150 ~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake 229 (706)
+|.+...+.|..+ ++=++--.+.+.. .. .--+-|-.+......-...+.|. +|+++|-+.|..-.+.|++
T Consensus 85 ~~~~~vh~~G~~i--~~QL~H~Gr~~~~--~g--~~~~apS~i~~~~~~~~p~~mt~----~eI~~ii~~f~~AA~~a~~ 154 (343)
T 3kru_A 85 KIVDICKANGAVM--GIQLAHAGRKCNI--SY--EDVVGPSPIKAGDRYKLPRELSV----EEIKSIVKAFGEAAKRANL 154 (343)
T ss_dssp HHHHHHHHTTCEE--EEEEECCGGGCCC--TT--SCCEESSSCCSSTTSCCCEECCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCceE--eeehhhccCccCc--ch--hhccCCCcCCCCccccCchhcCH----HHHHHHHHHHHHHHhhccc
Confidence 9999999888653 4444333433211 00 00123333321111011234443 5778888999999999999
Q ss_pred cCC-eEEEecCCCCCchhHHH--------hhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChh-----HHHHHHHH
Q 005248 230 YGR-AVRIGTNHGSLSDRIMS--------YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV-----VMVQAYRL 295 (706)
Q Consensus 230 ~~~-~IRIGvN~GSL~~~il~--------rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~-----~~i~ayrl 295 (706)
.|. .|-|=.-||-|=+.+++ +||.+.+.-..-++|-++-.++.==.++.|++|-|-.. ..++-+..
T Consensus 155 aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~ 234 (343)
T 3kru_A 155 AGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVE 234 (343)
T ss_dssp HTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHH
T ss_pred cCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHH
Confidence 885 46666668887665554 46766665556666666665554214667788877310 12445556
Q ss_pred HHHhhhcCCCCCcccc
Q 005248 296 LVAEMYVHGWDYPLHL 311 (706)
Q Consensus 296 la~~~~~eg~~YPLHL 311 (706)
+++++++. .|| ||+
T Consensus 235 ~a~~l~~~-vd~-i~v 248 (343)
T 3kru_A 235 YINMIKDK-VDL-IDV 248 (343)
T ss_dssp HHHHHTTT-CSE-EEE
T ss_pred HHHHhhcc-ccE-Eec
Confidence 67777666 665 555
No 375
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=49.57 E-value=57 Score=33.51 Aligned_cols=70 Identities=9% Similarity=0.155 Sum_probs=45.6
Q ss_pred HHHHHhhHHhhHHHHHHHHHHcCCeEEEec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCCh
Q 005248 209 YQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286 (706)
Q Consensus 209 Y~~El~~I~~~f~~vv~~ake~~~~IRIGv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv 286 (706)
+++..+++.+.+.++.+.|+++|+ +|++ |+..-. ..+|. ..++.+.-+..+++++.+-.++-+-+=..+.
T Consensus 189 ~~~~~~~~~~~l~~l~~~A~~~Gv--~l~lE~~~~~~----~~~g~--~~~~~t~~~~~~l~~~v~~~~vgl~~D~~h~ 259 (367)
T 1tz9_A 189 EEDLVENLRYFLERVIPVCEEENI--KMGIHPDDPPW----EIFGL--PRITKNLADLKRILSLVDSPANGITFCTGSL 259 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC--EEEECCCSSSS----CBTTB--CCCTTSHHHHHHHHHHTCSTTEECCEETTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--EEEEEECCCcc----cccCC--CcccCCHHHHHHHHHhcCCCCEEEEEecCch
Confidence 345577888999999999999996 6676 442110 11121 0245566677888888887777766655544
No 376
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=49.53 E-value=38 Score=35.93 Aligned_cols=69 Identities=23% Similarity=0.278 Sum_probs=51.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC---------------HHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHH
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQG---------------KREADACFEIKNSLVQKNYNIPLVADIHF--APSVAL 176 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~~---------------~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al 176 (706)
-.+.+..++++++..+.|...+.+-+-. .++.+.++.||+. -|-++||..|.|- +..-|+
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a---~G~d~~l~vDan~~~~~~~A~ 225 (404)
T 4e5t_A 149 YNDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAA---VGTKADLLFGTHGQFTVSGAK 225 (404)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHH---HGGGSEEEECCCSCBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHH---cCCCCeEEEeCCCCcCHHHHH
Confidence 3578999999999999999999997532 3456677777775 2567999999884 556566
Q ss_pred HHhhhcCce
Q 005248 177 RVAECFDKI 185 (706)
Q Consensus 177 ~a~~~~~ki 185 (706)
..++.+++.
T Consensus 226 ~~~~~l~~~ 234 (404)
T 4e5t_A 226 RLARRLEAY 234 (404)
T ss_dssp HHHHHHGGG
T ss_pred HHHHHHhhc
Confidence 666666664
No 377
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=49.16 E-value=2.8e+02 Score=33.84 Aligned_cols=159 Identities=12% Similarity=0.069 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHcCCCE--EEE----ecC------CHHHHHHHHHHHHhhccCCcC-----cceeeccCCCHHH----H
Q 005248 117 VAGTVEEVMRIADQGADL--VRI----TVQ------GKREADACFEIKNSLVQKNYN-----IPLVADIHFAPSV----A 175 (706)
Q Consensus 117 v~atv~Qi~~L~~aGcei--VRv----tv~------~~~~A~al~~I~~~L~~~g~~-----iPLVADIHF~~~~----A 175 (706)
++.-++=+..|.++|.++ +=+ +.| +...-+.+..+++.+...-+. ..+|+=-|+-.+. .
T Consensus 572 ~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~~~i 651 (1165)
T 2qf7_A 572 TYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVKYFV 651 (1165)
T ss_dssp HHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHchhhHHHHHhccccccccccCCchhHHHHH
Confidence 333444567888998777 555 323 445667788888764321100 0122333444333 3
Q ss_pred HHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC-CCchhHHHhhCC
Q 005248 176 LRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG-SLSDRIMSYYGD 253 (706)
Q Consensus 176 l~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G-SL~~~il~rygd 253 (706)
..|+++ ++.+||- .. - .+ -++++..++.||++|..++..+... ++.+ -|
T Consensus 652 ~~a~~~g~d~irif----~s-l---~~---------------~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d----~~-- 702 (1165)
T 2qf7_A 652 RQAAKGGIDLFRVF----DC-L---NW---------------VENMRVSMDAIAEENKLCEAAICYTGDILN----SA-- 702 (1165)
T ss_dssp HHHHHHTCCEEEEE----CT-T---CC---------------GGGGHHHHHHHHHTTCEEEEEEECCSCTTC----TT--
T ss_pred HHHHhcCcCEEEEE----ee-H---HH---------------HHHHHHHHHHHHhccceEEEEEEEeccccC----CC--
Confidence 356665 9999982 11 0 10 1377889999999998888766432 2221 11
Q ss_pred ChHHHHHHHHHHHHHHHHCCCCcEEEEEecCC----hhHHHHHHHHHHHhhhcCCCCCcccc
Q 005248 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASN----PVVMVQAYRLLVAEMYVHGWDYPLHL 311 (706)
Q Consensus 254 t~eamVeSAle~~~i~e~~~f~~iviS~KaSn----v~~~i~ayrlla~~~~~eg~~YPLHL 311 (706)
.+..=.+-+++.++.+++.|-+ .|++|-+. |..+-+-.+.|.++ ++-|||+
T Consensus 703 r~~~~~~~~~~~~~~~~~~Ga~--~i~l~DT~G~~~P~~~~~lv~~l~~~-----~~~~i~~ 757 (1165)
T 2qf7_A 703 RPKYDLKYYTNLAVELEKAGAH--IIAVKDMAGLLKPAAAKVLFKALREA-----TGLPIHF 757 (1165)
T ss_dssp SGGGCHHHHHHHHHHHHHTTCS--EEEEEETTCCCCHHHHHHHHHHHHHH-----CSSCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCC--EEEEeCccCCcCHHHHHHHHHHHHHh-----cCCeEEE
Confidence 1112245677788888999987 57788554 44444444444444 3556554
No 378
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=49.10 E-value=1.2e+02 Score=31.51 Aligned_cols=159 Identities=13% Similarity=0.091 Sum_probs=0.0
Q ss_pred HHHHHcCCCEEEEe---------------cCCHHHHHHHHHHHHhhccCCcC-cceeeccCC-----CHHHHHH-Hhhhc
Q 005248 125 MRIADQGADLVRIT---------------VQGKREADACFEIKNSLVQKNYN-IPLVADIHF-----APSVALR-VAECF 182 (706)
Q Consensus 125 ~~L~~aGceiVRvt---------------v~~~~~A~al~~I~~~L~~~g~~-iPLVADIHF-----~~~~Al~-a~~~~ 182 (706)
+-+.++|+|++=+. +.=.+-....+.|++ +.+ .++|+|.-| ++.-|++ |.+.+
T Consensus 48 ~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r-----~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~ 122 (281)
T 1oy0_A 48 RIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVR-----GAPHALVVADLPFGSYEAGPTAALAAATRFL 122 (281)
T ss_dssp HHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHH-----HCTTSEEEEECCTTSSTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHh-----cCCCCeEEEECCCCcccCCHHHHHHHHHHHH
Q ss_pred CceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE--EEecCCCCCchhHHHhhCCChHHHHH
Q 005248 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV--RIGTNHGSLSDRIMSYYGDSPRGMVE 260 (706)
Q Consensus 183 ~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I--RIGvN~GSL~~~il~rygdt~eamVe 260 (706)
+.--.+==|+=++. .+.+.|+++.+.|+|+ -||.+-=|....==-+-....+ -.+
T Consensus 123 ~eaGa~aVklEdg~----------------------e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~-~a~ 179 (281)
T 1oy0_A 123 KDGGAHAVKLEGGE----------------------RVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGD-AAE 179 (281)
T ss_dssp HTTCCSEEEEEBSG----------------------GGHHHHHHHHHHTCCEEEEEECCC--------------CH-HHH
T ss_pred HHhCCeEEEECCcH----------------------HHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcH-HHH
Q ss_pred HHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHhhhcCCCCCcccccccccCCCCCCch
Q 005248 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324 (706)
Q Consensus 261 SAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~g~~G~I 324 (706)
.+++-++.+++-|-+-|++-+ ++. +..+.++++ .+-|+-- -=||.+-||-|
T Consensus 180 ~~i~rA~a~~eAGA~~ivlE~----vp~--~~a~~it~~-----l~iP~ig--IGaG~~~dgQv 230 (281)
T 1oy0_A 180 QTIADAIAVAEAGAFAVVMEM----VPA--ELATQITGK-----LTIPTVG--IGAGPNCDGQV 230 (281)
T ss_dssp HHHHHHHHHHHHTCSEEEEES----CCH--HHHHHHHHH-----CSSCEEE--ESSCSCSSEEE
T ss_pred HHHHHHHHHHHcCCcEEEEec----CCH--HHHHHHHHh-----CCCCEEE--eCCCCCCCcce
No 379
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=49.05 E-value=80 Score=30.50 Aligned_cols=111 Identities=15% Similarity=0.162 Sum_probs=60.5
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCE--EEEe----cCCHH-HHHHHHHHHHhhccCCcCcceeeccCC-CH
Q 005248 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL--VRIT----VQGKR-EADACFEIKNSLVQKNYNIPLVADIHF-AP 172 (706)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGcei--VRvt----v~~~~-~A~al~~I~~~L~~~g~~iPLVADIHF-~~ 172 (706)
.+|+.+=|++..|..+ ..++++++.++|+++ +|+. +|... ..+.++.|++. ++.|+.+++=- ||
T Consensus 5 ~~~~i~psi~a~d~~~---l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~-----~~~~~~v~lmv~d~ 76 (228)
T 1h1y_A 5 AAAKIAPSMLSSDFAN---LAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKH-----TKAYLDCHLMVTNP 76 (228)
T ss_dssp -CCEEEEBGGGSCGGG---HHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTT-----CCSEEEEEEESSCG
T ss_pred cCCeEEEEeeeCCHHH---HHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhh-----cCCcEEEEEEecCH
Confidence 4678888999887444 556788889999998 5652 44411 12444555553 23344333211 22
Q ss_pred -HHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCC
Q 005248 173 -SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (706)
Q Consensus 173 -~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL 243 (706)
+....++++ +|-|=+-.+-- ++.+.++++.++++|+.+=+-+|..+-
T Consensus 77 ~~~i~~~~~agad~v~vH~~~~------------------------~~~~~~~~~~i~~~g~~igv~~~p~t~ 125 (228)
T 1h1y_A 77 SDYVEPLAKAGASGFTFHIEVS------------------------RDNWQELIQSIKAKGMRPGVSLRPGTP 125 (228)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGC------------------------TTTHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred HHHHHHHHHcCCCEEEECCCCc------------------------ccHHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 234445554 66554332211 011146788888888766555554443
No 380
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=48.67 E-value=49 Score=35.38 Aligned_cols=68 Identities=10% Similarity=0.179 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
.+.+..++++.++.++|.+.|.|-+-+ ..+.+.+..||+.+ |-++||..|.| |+..-|+..++.+++.
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v~avR~a~---G~d~~l~vDan~~~~~~~a~~~~~~l~~~ 268 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRCRLARAAI---GPDIAMAVDANQRWDVGPAIDWMRQLAEF 268 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH---CSSSEEEEECTTCCCHHHHHHHHHTTGGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHHHHHHHhc---CCCCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 367889999999999999999998753 45567777887753 66799999987 4555556666666654
No 381
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=48.59 E-value=61 Score=32.47 Aligned_cols=101 Identities=18% Similarity=0.255 Sum_probs=69.5
Q ss_pred HhhccCCcCcceeeccCCC--HHHHH----HHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHH
Q 005248 153 NSLVQKNYNIPLVADIHFA--PSVAL----RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVE 225 (706)
Q Consensus 153 ~~L~~~g~~iPLVADIHF~--~~~Al----~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~ 225 (706)
+.|++. ..++++|.||. |+-.. .++++ +|-+=++| ++.. +-++++++
T Consensus 53 ~~L~~~--g~~iflDlK~~DI~nTv~~~~~~~~~~gad~vTvh~--~~G~----------------------~~~~~a~~ 106 (239)
T 3tr2_A 53 EELMQK--GYRIFLDLKFYDIPQTVAGACRAVAELGVWMMNIHI--SGGR----------------------TMMETVVN 106 (239)
T ss_dssp HHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEG--GGCH----------------------HHHHHHHH
T ss_pred HHHHhc--CCCEEEEecccccchHHHHHHHHHHhCCCCEEEEec--cCCH----------------------HHHHHHHH
Confidence 345544 57899999994 54432 34455 78888877 3332 25677888
Q ss_pred HHHHcC---CeEEEec-CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEE
Q 005248 226 KCKKYG---RAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFS 280 (706)
Q Consensus 226 ~ake~~---~~IRIGv-N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS 280 (706)
.+++++ .|.=+|| -.-|.+..-+...|-+ ..+-+.+++.++.+.+.|.+-+|.|
T Consensus 107 ~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~-~~~~~~v~~~A~~a~~~g~~GvV~s 164 (239)
T 3tr2_A 107 ALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQ-EKVPDIVCRMATLAKSAGLDGVVCS 164 (239)
T ss_dssp HHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCC-SCHHHHHHHHHHHHHHHTCCEEECC
T ss_pred HHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCC-CCHHHHHHHHHHHHHHcCCCEEEEC
Confidence 888764 4555675 6778888666655532 4567888999999999999888866
No 382
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=48.57 E-value=24 Score=40.09 Aligned_cols=210 Identities=15% Similarity=0.123 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEe-cCCHHHHHHHHHHHHhhccCCc-CcceeeccCCCHHHHHHH----hhhcCceeeCCCC
Q 005248 118 AGTVEEVMRIADQGADLVRIT-VQGKREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRV----AECFDKIRVNPGN 191 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvt-v~~~~~A~al~~I~~~L~~~g~-~iPLVADIHF~~~~Al~a----~~~~~kiRINPGN 191 (706)
+.-.+.|+...+.|+|.|=+. |++.++++. +++.|.+.|. +++++|=|-- .-|++. ++..|.|=|-||.
T Consensus 173 ekD~~di~~~l~~g~d~v~~sfV~~a~dv~~---~~~~l~~~~~~~~~iiakIE~--~eav~nldeIl~~~DgImVargD 247 (587)
T 2e28_A 173 EKDRADILFGIRQGIDFIAASFVRRASDVLE---IRELLEAHDALHIQIIAKIEN--EEGVANIDEILEAADGLMVARGD 247 (587)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSCCSHHHHHH---HHHHHHHTTCTTSEEEEEECS--HHHHHTHHHHHHHSSEEEEEHHH
T ss_pred cccHHHHHHHHHcCCCEEEECCCCCHHHHHH---HHHHHHHcCCCCceEEEEECC--HHHHHhHHHHHHhCCEEEEcCch
Confidence 455667788889999998666 455555554 4555666776 8999999854 333322 2347999999998
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHH
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK 271 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~ 271 (706)
+|-.-. ++++..-.+.++++|+++|+|+=+.+. =|+. +.+.--+|-...- -+.-+--
T Consensus 248 Lgvei~---------------~~~v~~~qk~ii~~~~~~gkpvi~ATQ--mLeS-Mi~~p~PTRAE~s-----Dvanav~ 304 (587)
T 2e28_A 248 LGVEIP---------------AEEVPLIQKLLIKKSNMLGKPVITATQ--MLDS-MQRNPRPTRAEAS-----DVANAIF 304 (587)
T ss_dssp HHHHSC---------------GGGHHHHHHHHHHHHHHHTCCEEEESS--SSGG-GGTCSSCCHHHHH-----HHHHHHH
T ss_pred hhhhcC---------------HHHHHHHHHHHHHHHHHcCCCeEEech--hhHh-hccCCCccHHHHh-----ccchhhh
Confidence 875221 134444557899999999999966553 2322 1111012211110 1111222
Q ss_pred CCCCcEEEE---EecCChhHHHHHHHHHHHhhhcCCCCCccccc-ccccCCCCCCchhhHHHHHH-HhhcCCCceeEEec
Q 005248 272 LDFHNFLFS---MKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG-VTEAGEGEDGRMKSAIGIGT-LLQDGLGDTIRVSL 346 (706)
Q Consensus 272 ~~f~~iviS---~KaSnv~~~i~ayrlla~~~~~eg~~YPLHLG-VTEAG~g~~G~IKSavGiG~-LL~dGIGDTIRVSL 346 (706)
-|-+-+-+| .+-.-|...|+....++.+.++. ++|-.++- ... .....+..+++.++ -+++-++-..-|.+
T Consensus 305 dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~-~~~~~~~~~~~~---~~~~~~~~aia~aa~~~a~~~~a~aIv~~ 380 (587)
T 2e28_A 305 DGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQA-LEHRDILSQRTK---ESQTTITDAIGQSVAHTALNLDVAAIVTP 380 (587)
T ss_dssp HTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred hCcceeeecccccCCCCHHHHHHHHHHHHHHHhhh-hhhhhHhhhhhc---ccccchHHHHHHHHHHHHHhCCCCEEEEE
Confidence 477888887 56677888999988888887753 23311111 001 00113455565554 23444555555666
Q ss_pred CCCCcccchHHHHHHHh
Q 005248 347 TEPPEKEIDPCRRLANL 363 (706)
Q Consensus 347 T~dP~~EV~va~~l~~~ 363 (706)
|..- ..|+.+.+|
T Consensus 381 T~sG----~ta~~isr~ 393 (587)
T 2e28_A 381 TVSG----KTPQMVAKY 393 (587)
T ss_dssp CSSS----HHHHHHHHT
T ss_pred CCCc----HHHHHHHhc
Confidence 6653 245555543
No 383
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=48.46 E-value=24 Score=37.05 Aligned_cols=57 Identities=9% Similarity=0.074 Sum_probs=43.7
Q ss_pred CcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 159 NYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 159 g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
.+++||++|=.+ +..-+..+++ +++-|.|.|..+|.-. ...++++.|+++|+++=
T Consensus 250 ~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit----------------------~~~~i~~~A~~~gi~~~ 307 (386)
T 1wue_A 250 ELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIH----------------------EALKIAAFCQENDLLVW 307 (386)
T ss_dssp TCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHH----------------------HHHHHHHHHHHTTCEEE
T ss_pred hcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHH----------------------HHHHHHHHHHHCCCeEE
Confidence 468999999654 4555555554 4999999999998733 45779999999999985
Q ss_pred Ee
Q 005248 236 IG 237 (706)
Q Consensus 236 IG 237 (706)
+|
T Consensus 308 ~~ 309 (386)
T 1wue_A 308 LG 309 (386)
T ss_dssp EC
T ss_pred EC
Confidence 55
No 384
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=48.19 E-value=51 Score=34.35 Aligned_cols=67 Identities=10% Similarity=0.095 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhhhcCc
Q 005248 115 KDVAGTVEEVMRIAD-QGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDK 184 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~-aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~~~~k 184 (706)
.|.+..++++.+..+ .|...+.+-+-. .++.+.+..||+. -|-++||..|.|- +..-|+..++.+++
T Consensus 141 ~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~---~g~~~~l~vDan~~~~~~~a~~~~~~l~~ 213 (370)
T 1chr_A 141 GDTKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNS---LGSKAYLRVDVNQAWDEQVASVYIPELEA 213 (370)
T ss_dssp SSHHHHHHHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHH---SSTTCCEEEECTTCCCTTHHHHHTHHHHT
T ss_pred CCcHHHHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHh---cCCCCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 356777888877776 899999988743 5778888888875 3567999999874 45555555555554
No 385
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=48.12 E-value=1.9e+02 Score=27.64 Aligned_cols=126 Identities=14% Similarity=0.161 Sum_probs=76.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh----cCcee-eCC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC----FDKIR-VNP 189 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~----~~kiR-INP 189 (706)
.+.+..+++++++ +.|||++ |+ .--+-..||+ ..++|+| +|..+.-=.+.|+.. -.||= |.-
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVI-IS-----RGgta~~lr~-----~~~iPVV-~I~~s~~Dil~al~~a~~~~~kIavvg~ 102 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAI-IS-----RGATSDYIKK-----SVSIPSI-SIKVTRFDTMRAVYNAKRFGNELALIAY 102 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEE-EE-----EHHHHHHHHT-----TCSSCEE-EECCCHHHHHHHHHHHGGGCSEEEEEEE
T ss_pred CCHHHHHHHHHHh-cCCCeEE-EE-----CChHHHHHHH-----hCCCCEE-EEcCCHhHHHHHHHHHHhhCCcEEEEeC
Confidence 4578888888888 8899965 33 1334445665 3789975 788776544544443 33332 444
Q ss_pred CCCCcchhhccccccchHHHHHHHhhH---------HhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhC-C-----C
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHI---------EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-D-----S 254 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I---------~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~ryg-d-----t 254 (706)
+|+-.+-+.| .++-.+ .+...+.++.+|+.|+-+=|| |.+.-++.++|| + +
T Consensus 103 ~~~~~~~~~~-----------~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG---~~~~~~~A~~~Gl~~vli~s 168 (196)
T 2q5c_A 103 KHSIVDKHEI-----------EAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVS---GKTVTDEAIKQGLYGETINS 168 (196)
T ss_dssp SSCSSCHHHH-----------HHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEE---CHHHHHHHHHTTCEEEECCC
T ss_pred cchhhHHHHH-----------HHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEEC---CHHHHHHHHHcCCcEEEEec
Confidence 4544332221 121111 145677999999999999787 778888888888 2 2
Q ss_pred hHHHHHHHHHHHH
Q 005248 255 PRGMVESAFEFAR 267 (706)
Q Consensus 255 ~eamVeSAle~~~ 267 (706)
.+.=|+.|++.+.
T Consensus 169 g~eSI~~Ai~eA~ 181 (196)
T 2q5c_A 169 GEESLRRAIEEAL 181 (196)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 2444455555443
No 386
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=47.67 E-value=76 Score=33.73 Aligned_cols=86 Identities=13% Similarity=0.190 Sum_probs=60.0
Q ss_pred cCCCCceEEEeccCCCCC-CHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccCC--CH
Q 005248 98 IGSEHPIRVQTMTTNDTK-DVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHF--AP 172 (706)
Q Consensus 98 IGG~~PI~VQSMt~t~T~-Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~ 172 (706)
+||...=+|..-++.-.. +.+...+++.++.+.|..-+.+-++ ..++.+.+..||+.+ |-++.|..|.|- ++
T Consensus 169 LGG~~~~~v~~y~s~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~~---g~~~~l~vDaN~~~~~ 245 (412)
T 4h1z_A 169 LGGQRRDRIAAYISGLPEDTRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRERL---GPAVRIACDMHWAHTA 245 (412)
T ss_dssp TTCCCCSEEEEEECCCCCSSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH---CSSSEEEEECCSCCCH
T ss_pred cCCCCCceEEEEeccCCCCcHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhcc---CCeEEEEeccccCCCH
Confidence 566654455555444333 4566677888999999999999854 445677788888753 567999999985 56
Q ss_pred HHHHHHhhhcCcee
Q 005248 173 SVALRVAECFDKIR 186 (706)
Q Consensus 173 ~~Al~a~~~~~kiR 186 (706)
.-|+..++.+++..
T Consensus 246 ~~A~~~~~~l~~~~ 259 (412)
T 4h1z_A 246 SEAVALIKAMEPHG 259 (412)
T ss_dssp HHHHHHHHHHGGGC
T ss_pred HHHHHHHHhhcccc
Confidence 66666666666554
No 387
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=47.66 E-value=72 Score=30.56 Aligned_cols=67 Identities=22% Similarity=0.225 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCEEEEec-----C-CHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCce-----ee
Q 005248 120 TVEEVMRIADQGADLVRITV-----Q-GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKI-----RV 187 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv-----~-~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~ki-----RI 187 (706)
+.+|+.++.++|++.|=+-. | +....+.++.+++.+ -.++++.++|- +.-|..+.+. +|-| -+
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~----~~~~v~~~~~t-~~ea~~a~~~Gad~i~~~v~g~ 164 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKY----PNQLLMADIST-FDEGLVAHQAGIDFVGTTLSGY 164 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHC----TTCEEEEECSS-HHHHHHHHHTTCSEEECTTTTS
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhC----CCCeEEEeCCC-HHHHHHHHHcCCCEEeeecccc
Confidence 57899999999999886543 2 123356677777742 26889999984 5557777665 7777 45
Q ss_pred CCCC
Q 005248 188 NPGN 191 (706)
Q Consensus 188 NPGN 191 (706)
|||.
T Consensus 165 ~~~~ 168 (234)
T 1yxy_A 165 TPYS 168 (234)
T ss_dssp STTS
T ss_pred CCCC
Confidence 5654
No 388
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=47.31 E-value=56 Score=32.53 Aligned_cols=138 Identities=15% Similarity=0.081 Sum_probs=81.3
Q ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhcc-----C---------------------CcCcceeeccCCCHHHHHH
Q 005248 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQ-----K---------------------NYNIPLVADIHFAPSVALR 177 (706)
Q Consensus 124 i~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~-----~---------------------g~~iPLVADIHF~~~~Al~ 177 (706)
|+++.++|++- |-+|-.+.++.+..+.+.++. + +-++++++=| -.+....
T Consensus 84 i~~~l~~g~~g--I~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~I-Et~~av~- 159 (256)
T 1dxe_A 84 IKRLLDIGFYN--FLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQI-ESQQGVD- 159 (256)
T ss_dssp HHHHHHTTCCE--EEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEE-CSHHHHH-
T ss_pred HHHHHhcCCce--eeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEE-CCHHHHH-
Confidence 78888899987 566777777777777776541 0 1235555544 2233222
Q ss_pred Hhh------hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhh
Q 005248 178 VAE------CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251 (706)
Q Consensus 178 a~~------~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~ry 251 (706)
.++ .+|.+=|-|+.+.-.-. ..| ..+...+......++.+|+++|++. |+-.+
T Consensus 160 ~~~eIa~~~~vd~l~iG~~DL~~~lg----~~~-----~~~~p~v~~a~~~iv~aa~a~G~~~--~v~~~---------- 218 (256)
T 1dxe_A 160 NVDAIAATEGVDGIFVGPSDLAAALG----HLG-----NASHPDVQKAIQHIFNRASAHGKPS--GILAP---------- 218 (256)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTT----CTT-----CTTSHHHHHHHHHHHHHHHHTTCCE--EEECC----------
T ss_pred hHHHHhCCCCCCEEEEChHHHHHHhC----CCC-----CCCCHHHHHHHHHHHHHHHHhCCce--EEecC----------
Confidence 222 35566666654422110 001 0111224445667999999999997 55222
Q ss_pred CCChHHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHh
Q 005248 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 252 gdt~eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~ 299 (706)
+| +.++.+.++||+-+.++ +|...+.++.+.+.+.
T Consensus 219 --d~--------~~~~~~~~~G~~~~s~~---~d~~~l~~~~~~~~~~ 253 (256)
T 1dxe_A 219 --VE--------ADARRYLEWGATFVAVG---SDLGVFRSATQKLADT 253 (256)
T ss_dssp --SH--------HHHHHHHHTTCCEEEEE---EHHHHHHHHHHHHHHH
T ss_pred --CH--------HHHHHHHHcCCCEEEec---hHHHHHHHHHHHHHHH
Confidence 22 36677789999987665 4667777777776665
No 389
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=47.19 E-value=37 Score=35.58 Aligned_cols=67 Identities=10% Similarity=0.156 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC----C-HHHHHHHHHHHHhhccCCcCcceeeccC--CC-HHHHHHHhhhcCce
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQ----G-KREADACFEIKNSLVQKNYNIPLVADIH--FA-PSVALRVAECFDKI 185 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~----~-~~~A~al~~I~~~L~~~g~~iPLVADIH--F~-~~~Al~a~~~~~ki 185 (706)
|.+..++++.++.++|...+.+-+- + .++.+.++.||+.+ |-++||..|.| |+ +.-|+..++.+++.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~---g~~~~l~vDan~~~~d~~~A~~~~~~l~~~ 220 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAA---GPEMEVQIDLASKWHTCGHSAMMAKRLEEF 220 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHH---CSSSEEEEECTTTTCSHHHHHHHHHHSGGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCCHHHHHHHHHHhhhc
Confidence 4478889999999999999999884 2 55667777777743 67899999998 45 55666666666664
No 390
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=46.78 E-value=30 Score=36.34 Aligned_cols=114 Identities=18% Similarity=0.248 Sum_probs=73.1
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHH----HhhccCCc-CcceeeccC--CCHHHHHHHhhhcCceeeCCCCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGKREADACFEIK----NSLVQKNY-NIPLVADIH--FAPSVALRVAECFDKIRVNPGNF 192 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~----~~L~~~g~-~iPLVADIH--F~~~~Al~a~~~~~kiRINPGNi 192 (706)
-++-.++=.+|||+. +-+|=.=+++.+.+.. ++.++.|+ ++|+|+=|= -+++-|.-. . +-.+.| |-.+
T Consensus 167 d~~~Lk~KvdAGAdf--~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s~k~~~f~-~-~~G~~I-P~~l 241 (315)
T 3ijd_A 167 EHLRIIDKINKGCKY--FITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEFM-K-WLGISI-PRWL 241 (315)
T ss_dssp HHHHHHHHHHTTCCE--EEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCSHHHHHHH-H-HHTCCC-CHHH
T ss_pred HHHHHHHHHHCCCCE--EEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCCHHHHHHH-h-cCCCCC-CHHH
Confidence 355666668999995 4455444444444444 67888999 999999874 256654321 1 222222 1111
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchh
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~ 246 (706)
- ++++ .+.| .-+..++-..+.++.+++.|...|+| ||.|-=|++-|
T Consensus 242 ~---~~l~--~~~d-~~~~Gi~~a~e~~~~L~~~~~g~~~p--~G~niesv~~r 287 (315)
T 3ijd_A 242 E---NDLM--NCED-ILNKSVSLSKSIFNELMEFCLEKGIP--IGCNIESVSVR 287 (315)
T ss_dssp H---HHHH--TTCC-CHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEECCSC
T ss_pred H---HHHH--hCCC-HHHHHHHHHHHHHHHHHHhcCcCCcC--CCccHHHHHhH
Confidence 1 1122 1223 24567888889999999999999988 59999999876
No 391
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=46.56 E-value=51 Score=31.59 Aligned_cols=97 Identities=16% Similarity=0.145 Sum_probs=59.0
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH--HHHHHHHHHHHhhccCCc-CcceeeccCCC--HH-HHHHHhhh
Q 005248 108 TMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK--READACFEIKNSLVQKNY-NIPLVADIHFA--PS-VALRVAEC 181 (706)
Q Consensus 108 SMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~--~~A~al~~I~~~L~~~g~-~iPLVADIHF~--~~-~Al~a~~~ 181 (706)
|+-.-|..|.+..++.+.++.+ ..+.+=|-.+-. .-.+.++.||+. + +.|++.|.|+. |. .+..++++
T Consensus 6 ~ilalD~~~~~~~~~~~~~~~~-~v~~~kv~~~~f~~~G~~~i~~l~~~-----~p~~~v~lD~kl~dip~t~~~~~~~~ 79 (216)
T 1q6o_A 6 LQVALDNQTMDSAYETTRLIAE-EVDIIEVGTILCVGEGVRAVRDLKAL-----YPHKIVLADAKIADAGKILSRMCFEA 79 (216)
T ss_dssp EEEEECCSSHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHH-----CTTSEEEEEEEECSCHHHHHHHHHHT
T ss_pred eEEEECCCCHHHHHHHHHHhcc-cCCEEEECHHHHHHhCHHHHHHHHHh-----CCCCeEEEEEEecccHHHHHHHHHhC
Confidence 4555677888887777777653 456665432211 112334445542 3 47888999995 33 34456666
Q ss_pred -cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 182 -FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 182 -~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
+|-|=+.+.- |. +.+.++++.++++|...
T Consensus 80 Gad~itvh~~~-g~-----------------------~~l~~~~~~~~~~g~~~ 109 (216)
T 1q6o_A 80 NADWVTVICCA-DI-----------------------NTAKGALDVAKEFNGDV 109 (216)
T ss_dssp TCSEEEEETTS-CH-----------------------HHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEeccC-CH-----------------------HHHHHHHHHHHHcCCCc
Confidence 8888777642 11 13567889999998875
No 392
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=46.46 E-value=2e+02 Score=29.87 Aligned_cols=146 Identities=17% Similarity=0.229 Sum_probs=87.9
Q ss_pred ccCCCCCCHHHHHHHHHHHHHc---CCCEEEEecCCH-----HHHHHHHHHHHhhccCCcC-cceeeccCCCHHHHHHHh
Q 005248 109 MTTNDTKDVAGTVEEVMRIADQ---GADLVRITVQGK-----READACFEIKNSLVQKNYN-IPLVADIHFAPSVALRVA 179 (706)
Q Consensus 109 Mt~t~T~Dv~atv~Qi~~L~~a---GceiVRvtv~~~-----~~A~al~~I~~~L~~~g~~-iPLVADIHF~~~~Al~a~ 179 (706)
+-||.-.-+..-.-.+.+|++. |.+.|-+-|-+. .+-...-+-.++|.+.|+. +|.+.| |+.+|....
T Consensus 77 lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~d---d~~~akrl~ 153 (265)
T 1wv2_A 77 LPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSD---DPIIARQLA 153 (265)
T ss_dssp EEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECS---CHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHH
Confidence 4466554444444456777777 999999987522 1122222233456677987 787766 588888777
Q ss_pred hh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHH-HcCCeEEEecCCCCCchhHHHhhCCChHH
Q 005248 180 EC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK-KYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257 (706)
Q Consensus 180 ~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ak-e~~~~IRIGvN~GSL~~~il~rygdt~ea 257 (706)
+. ++-|---|.-||.+.. . +| ..+|+..+ .-++|+=.+-+ + .||
T Consensus 154 ~~G~~aVmPlg~pIGsG~G-i-----~~--------------~~lI~~I~e~~~vPVI~eGG---I---------~TP-- 199 (265)
T 1wv2_A 154 EIGCIAVMPLAGLIGSGLG-I-----CN--------------PYNLRIILEEAKVPVLVDAG---V---------GTA-- 199 (265)
T ss_dssp HSCCSEEEECSSSTTCCCC-C-----SC--------------HHHHHHHHHHCSSCBEEESC---C---------CSH--
T ss_pred HhCCCEEEeCCccCCCCCC-c-----CC--------------HHHHHHHHhcCCCCEEEeCC---C---------CCH--
Confidence 76 7777222344777542 1 11 11233333 34788743221 1 355
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEE---EecCChhHHHHHHHHHH
Q 005248 258 MVESAFEFARICRKLDFHNFLFS---MKASNPVVMVQAYRLLV 297 (706)
Q Consensus 258 mVeSAle~~~i~e~~~f~~iviS---~KaSnv~~~i~ayrlla 297 (706)
+.+..+-++|.+-+++. .|+.|+..|.++|..-.
T Consensus 200 ------sDAa~AmeLGAdgVlVgSAI~~a~dP~~ma~af~~Av 236 (265)
T 1wv2_A 200 ------SDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAI 236 (265)
T ss_dssp ------HHHHHHHHHTCSEEEESHHHHTSSSHHHHHHHHHHHH
T ss_pred ------HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHH
Confidence 24566677899998875 68999999988887744
No 393
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=46.27 E-value=25 Score=38.94 Aligned_cols=156 Identities=18% Similarity=0.205 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccC-CcCcceeeccCCCHHHHHHHh----hhcCceeeCCCCC
Q 005248 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQK-NYNIPLVADIHFAPSVALRVA----ECFDKIRVNPGNF 192 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~-g~~iPLVADIHF~~~~Al~a~----~~~~kiRINPGNi 192 (706)
+.-.+-|....+.|+|.|-+. =.+.|+-+.++++.|.+. |.+++++|=|- -..|++.+ +..|.|=|-||.+
T Consensus 172 ekD~~Di~~~l~~gvD~I~ls--fV~saeDv~~~~~~l~~~~~~~i~IiakIE--t~eav~nldeI~~~sDgImVargDL 247 (470)
T 1e0t_A 172 EKDKQDLIFGCEQGVDFVAAS--FIRKRSDVIEIREHLKAHGGENIHIISKIE--NQEGLNNFDEILEASDGIMVARGDL 247 (470)
T ss_dssp HHHHHHHHHHHHHTCSEEEES--SCCSHHHHHHHHHHHHTTTCTTCEEEEEEC--SHHHHHTHHHHHHHSSEEEEEHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHHHHHHhcCCCceEEEEEC--CHHHHHhHHHHHHHCCEEEECchHh
Confidence 555666777888899998766 333455555555566666 67899999883 23333222 3478888888877
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHH--
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICR-- 270 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e-- 270 (706)
|-.-. .+++....+.++.+|+++|+|+=+.+ ==|+.= .+.--+|- | |--+++.
T Consensus 248 gveig---------------~e~v~~~qk~ii~~araaGkpvI~AT--QMLeSM-i~~p~PTR-A------EvsDVanAV 302 (470)
T 1e0t_A 248 GVEIP---------------VEEVIFAQKMMIEKCIRARKVVITAT--MMLDSM-IKNPRPTD-A------EAGDVANAI 302 (470)
T ss_dssp HHHSC---------------HHHHHHHHHHHHHHHHHHTCEEEEEC--C----------CCCH-H------HHHHHHHHH
T ss_pred hhhcC---------------HHHHHHHHHHHHHHHHHcCCCEEEec--hhhHhh-ccCCCccH-H------HHhhhhHhh
Confidence 64221 13355555789999999999973333 112110 00000221 1 1222222
Q ss_pred HCCCCcEEEE---EecCChhHHHHHHHHHHHhhhc
Q 005248 271 KLDFHNFLFS---MKASNPVVMVQAYRLLVAEMYV 302 (706)
Q Consensus 271 ~~~f~~iviS---~KaSnv~~~i~ayrlla~~~~~ 302 (706)
--|.+-+-+| .+-.-|...|+.-..++.+.++
T Consensus 303 ~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~ 337 (470)
T 1e0t_A 303 LDGTDAVMLSGESAKGKYPLEAVSIMATICERTDR 337 (470)
T ss_dssp HHTCSEEEECCC------CHHHHHHHHHHHHHHHT
T ss_pred hcCccEEEecccccCCCCHHHHHHHHHHHHHHHHh
Confidence 2488889997 4666688889998888888776
No 394
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=45.80 E-value=35 Score=35.44 Aligned_cols=66 Identities=17% Similarity=0.248 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
.|.+..++++.++.++|...+.+-+.-.++.+.++.||+.+ -+++|..|.| |+..- +..++.+++.
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v~avr~a~----~~~~l~vDan~~~~~~~-~~~~~~l~~~ 214 (375)
T 1r0m_A 147 ADEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPVRATREAF----PDIRLTVDANSAYTLAD-AGRLRQLDEY 214 (375)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHHHHHHHHC----TTSCEEEECTTCCCGGG-HHHHHTTGGG
T ss_pred CCHHHHHHHHHHHHHhcccEEEEecChHHHHHHHHHHHHHc----CCCeEEEeCCCCCCHHH-HHHHHHHHhC
Confidence 37888999999999999999999874455778889998874 3689999987 44444 4444445554
No 395
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=45.39 E-value=1.2e+02 Score=32.42 Aligned_cols=101 Identities=19% Similarity=0.276 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC---CHHHHHHHHHHHHhhccCCc-CcceeeccCCCHHHHHHHhhh-cCceeeC--CC
Q 005248 118 AGTVEEVMRIADQGADLVRITVQ---GKREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAEC-FDKIRVN--PG 190 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~---~~~~A~al~~I~~~L~~~g~-~iPLVADIHF~~~~Al~a~~~-~~kiRIN--PG 190 (706)
..+.+++.++.++|++.+=+... .....+.++.|++. + ++|+++----+...|..+++. ++.|.+. ||
T Consensus 232 ~~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~-----~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g 306 (491)
T 1zfj_A 232 SDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAH-----FPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPG 306 (491)
T ss_dssp TTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHH-----CSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCC
T ss_pred hhHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHH-----CCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCC
Confidence 34578899999999998877652 23344567777775 5 688886544567888888886 9999884 34
Q ss_pred CCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 191 Nig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
.+.... .+.... -..-+.+.++.+.|++.++||
T Consensus 307 ~~~~tr-~~~~~~----------~p~~~~l~~~~~~~~~~~ipv 339 (491)
T 1zfj_A 307 SICTTR-VVAGVG----------VPQVTAIYDAAAVAREYGKTI 339 (491)
T ss_dssp TTBCHH-HHTCCC----------CCHHHHHHHHHHHHHHTTCEE
T ss_pred cceEEe-eecCCC----------CCcHHHHHHHHHHHhhcCCCE
Confidence 333211 111100 001123455667777888888
No 396
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=45.10 E-value=2.7e+02 Score=30.12 Aligned_cols=51 Identities=18% Similarity=0.272 Sum_probs=37.8
Q ss_pred HHHHHHHHHHcCCCEEEEecC-------------CHHHHHHHHHHHHhhccCCcCcceeeccCCCH
Q 005248 120 TVEEVMRIADQGADLVRITVQ-------------GKREADACFEIKNSLVQKNYNIPLVADIHFAP 172 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~-------------~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~ 172 (706)
|-+.|..|+++|...|||.+. +.+.-+.+.++.+.+++.|+ =+|-|+|-.+
T Consensus 47 t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi--~vildlH~~~ 110 (515)
T 3icg_A 47 THAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDM--YVIINLHHEN 110 (515)
T ss_dssp CHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTC--EEEEECCSCT
T ss_pred CHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCC--EEEEecCCCC
Confidence 345666778899999999653 34556788888888888776 4566998665
No 397
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=45.05 E-value=2.7e+02 Score=28.68 Aligned_cols=78 Identities=14% Similarity=0.155 Sum_probs=55.0
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcC--CCEEEEec---CCHHHHHHHHHHHHhhccCCcC-cceeec-cCCCHHH
Q 005248 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQG--ADLVRITV---QGKREADACFEIKNSLVQKNYN-IPLVAD-IHFAPSV 174 (706)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aG--ceiVRvtv---~~~~~A~al~~I~~~L~~~g~~-iPLVAD-IHF~~~~ 174 (706)
.|+.+|-.. + +..++++..+.++| ++++=+.. ......+.++.|++. ++ +|+++. + -++..
T Consensus 95 ~~v~v~~g~--~----~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~-----~~~~~vi~G~v-~s~e~ 162 (336)
T 1ypf_A 95 LIASISVGV--K----EDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH-----LPESFVIAGNV-GTPEA 162 (336)
T ss_dssp CCCEEEECC--S----HHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH-----CTTSEEEEEEE-CSHHH
T ss_pred CeEEEeCCC--C----HHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh-----CCCCEEEECCc-CCHHH
Confidence 377777322 1 33567788999999 99987754 224556778888875 44 677776 4 46889
Q ss_pred HHHHhhh-cCceeeCCCCCC
Q 005248 175 ALRVAEC-FDKIRVNPGNFA 193 (706)
Q Consensus 175 Al~a~~~-~~kiRINPGNig 193 (706)
|..|.++ +|.|-+ +|-|
T Consensus 163 A~~a~~aGad~Ivv--s~hg 180 (336)
T 1ypf_A 163 VRELENAGADATKV--GIGP 180 (336)
T ss_dssp HHHHHHHTCSEEEE--CSSC
T ss_pred HHHHHHcCCCEEEE--ecCC
Confidence 9999987 999998 4444
No 398
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=44.50 E-value=8.3 Score=39.86 Aligned_cols=140 Identities=16% Similarity=0.224 Sum_probs=85.6
Q ss_pred cCCCCceEEEecc--CCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhcc--------CCcC-ccee-
Q 005248 98 IGSEHPIRVQTMT--TNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ--------KNYN-IPLV- 165 (706)
Q Consensus 98 IGG~~PI~VQSMt--~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~--------~g~~-iPLV- 165 (706)
|||+. +.|.+|. +.|..+.+.+-.|+.+|.+| |+|=..=.+.+ .-+.++.+.+.. .|+. +|+-
T Consensus 55 I~Gd~-v~V~~lv~~g~dPH~yeptp~d~~~l~~A--Dlvv~~G~~lE--~w~~~~~~~~~~~~~~v~~s~~i~~~~~~~ 129 (313)
T 1toa_A 55 IAQGD-VHLKGLMGPGVDPHLYTATAGDVEWLGNA--DLILYNGLHLE--TKMGEVFSKLRGSRLVVAVSETIPVSQRLS 129 (313)
T ss_dssp HHGGG-SEEEESCCTTCCTTTCCCCHHHHHHHHHC--SEEEECCTTCS--TTCHHHHHHHTTSSEEEEGGGGSCGGGSCB
T ss_pred HcCCc-eEEEEccCCCCCcccCCCCHHHHHHHHcC--CEEEEcCCCcH--HHHHHHHHhccCCCeEEEeecCcccccccc
Confidence 56665 8899994 56789999999999999876 56544333333 222333322211 1221 1221
Q ss_pred -----eccC--CCHHHHHHHhhh-cCc-eeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 166 -----ADIH--FAPSVALRVAEC-FDK-IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 166 -----ADIH--F~~~~Al~a~~~-~~k-iRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
.|=| ++|..+...++. .+. ..+.|.|=.. |+.. -+.|.++|+.++++++..+..+++.++++
T Consensus 130 ~~~~~~DPHvWldp~n~~~~a~~I~~~L~~~DP~~a~~----Y~~N---~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~-- 200 (313)
T 1toa_A 130 LEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTRE----FTQR---YQAYQQQLDKLDAYVRRKAQSLPAERRVL-- 200 (313)
T ss_dssp STTSCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHH----HHHH---HHHHHHHHHHHHHHHHHHHHTSCGGGCEE--
T ss_pred cCCCCCCCceeCCHHHHHHHHHHHHHHHHHHChhhHHH----HHHH---HHHHHHHHHHHHHHHHHHHhhCCccCCEE--
Confidence 1333 567777765554 222 2377866322 1111 25699999999999999988877666664
Q ss_pred ecCCCCCchhHHHhhC
Q 005248 237 GTNHGSLSDRIMSYYG 252 (706)
Q Consensus 237 GvN~GSL~~~il~ryg 252 (706)
=|.|.++ ..+.++||
T Consensus 201 v~~H~af-~Yfa~~yG 215 (313)
T 1toa_A 201 VTAHDAF-GYFSRAYG 215 (313)
T ss_dssp EEEESCC-HHHHHHHT
T ss_pred EEECCcH-HHHHHHCC
Confidence 6778876 55777777
No 399
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=44.48 E-value=57 Score=32.43 Aligned_cols=78 Identities=18% Similarity=0.246 Sum_probs=49.1
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHH-cCCCEEEEecCCHH----------H----HHHHHHHHHhhccCCcCccee
Q 005248 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIAD-QGADLVRITVQGKR----------E----ADACFEIKNSLVQKNYNIPLV 165 (706)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~-aGceiVRvtv~~~~----------~----A~al~~I~~~L~~~g~~iPLV 165 (706)
+.|+.+|=+.+ |.+...+-++++.+ +|+|.|-|.+.... . .+.++.+++. +++|++
T Consensus 98 ~~p~~v~l~~~----~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-----~~~pv~ 168 (311)
T 1ep3_A 98 ELPIIANVAGS----EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-----SKVPLY 168 (311)
T ss_dssp TSCEEEEECCS----SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-----CSSCEE
T ss_pred CCcEEEEEcCC----CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-----cCCCEE
Confidence 45777776644 46666666666666 99999988654211 1 4455555553 468888
Q ss_pred e----ccCCCHHHHHHHhhh-cCceee
Q 005248 166 A----DIHFAPSVALRVAEC-FDKIRV 187 (706)
Q Consensus 166 A----DIHF~~~~Al~a~~~-~~kiRI 187 (706)
. ++.--..+|..+.++ +|-|=+
T Consensus 169 vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 169 VKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp EEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred EEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 6 654335667666665 887776
No 400
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=44.25 E-value=1.8e+02 Score=29.53 Aligned_cols=86 Identities=15% Similarity=0.246 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHhhccCCcCcce-eeccCCCHHHHHHHhhh-cCceeeCCCCCCcc
Q 005248 121 VEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPL-VADIHFAPSVALRVAEC-FDKIRVNPGNFADR 195 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~---~~A~al~~I~~~L~~~g~~iPL-VADIHF~~~~Al~a~~~-~~kiRINPGNig~~ 195 (706)
+++.+..+++|+.-++|-+... -..+.+..|++. +++|+ .-|+-.|+.-..+|.++ +|.|=+.-.-+.+
T Consensus 75 ~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~-----v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~- 148 (272)
T 3qja_A 75 AKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRAS-----VSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQ- 148 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHH-----CSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCH-
T ss_pred HHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHh-----CCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCH-
Confidence 5677888999999999987665 246788888875 77886 46777788644556555 8888764222211
Q ss_pred hhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 196 ~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
+.+.++++.|+++|..+
T Consensus 149 ----------------------~~l~~l~~~a~~lGl~~ 165 (272)
T 3qja_A 149 ----------------------SVLVSMLDRTESLGMTA 165 (272)
T ss_dssp ----------------------HHHHHHHHHHHHTTCEE
T ss_pred ----------------------HHHHHHHHHHHHCCCcE
Confidence 24667888888888876
No 401
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=44.17 E-value=41 Score=34.36 Aligned_cols=123 Identities=8% Similarity=0.115 Sum_probs=71.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCceee---
Q 005248 113 DTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIRV--- 187 (706)
Q Consensus 113 ~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiRI--- 187 (706)
...+.+....++.+ ..|...+-+-+...++.+.++.+++. |-+++|..|-| |++.-|+..++.++.++|
T Consensus 129 ~~~~~~~~~~~~~~--~~~~~~~Kik~g~~~d~~~v~~vr~~----g~d~~l~vDaN~~w~~~~A~~~~~~l~~~~i~~i 202 (329)
T 4gfi_A 129 SLADPDTMAAKTAE--NAGRPLLKIKTGTADDEARLRAVRAA----APEARIIIDANEGWNDDNIEYYLKLAAELKISLI 202 (329)
T ss_dssp CCCCHHHHHHHHHH--TTTSSEEEEECCSSCCHHHHHHHHHH----CTTSEEEEECTTCCCTTTHHHHHHHHHHTTCCEE
T ss_pred cCCChHHHHHHHHh--hccccEEEecCCcccHHHHHHHHHHh----ccCCeEEEEcCCCCCHHHHHHHHHhhhhcCceEE
Confidence 34556666666543 56777777777766677777777653 67788998876 445555555555555443
Q ss_pred ----CCCCCCcchhh-c------cccccchHHHHHHHhhHH------------hhHHHHHHHHHHcCCeEEEecCCC
Q 005248 188 ----NPGNFADRRAQ-F------EQLEYTDDEYQKELQHIE------------EVFSPLVEKCKKYGRAVRIGTNHG 241 (706)
Q Consensus 188 ----NPGNig~~~k~-F------~~~~YtdeeY~~El~~I~------------~~f~~vv~~ake~~~~IRIGvN~G 241 (706)
.|+|.....+. - .+..||-+++.+.++..+ ....++.+.|+++|+++=+|-..+
T Consensus 203 EqP~~~~~~~~~~~~~~~ipia~dEs~~~~~d~~~~~~a~d~i~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~e 279 (329)
T 4gfi_A 203 EQPLPAGKDAMLARIEHPVLICADESVHSTEDLAGLRDRYDAINIKLDKTGGLTEALVMKAEAERLGFTIMVGCMLG 279 (329)
T ss_dssp ECCSCTTSCGGGGGSCCSSEEEESTTCCTGGGSGGGTTTCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSC
T ss_pred EecCCCccHHHHHHhcCCCCchhccCCCCHHHHHHHhhccCeEEecCceeCCHHHHHHHHHHHHHCCCEEEECCcch
Confidence 45554321110 0 122344334433222111 235678899999999997775443
No 402
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=44.15 E-value=51 Score=34.97 Aligned_cols=67 Identities=21% Similarity=0.174 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC-----------HHHHHHHHHHHHhhccCCcCcceeeccCCCH--HHHHHHhhhc
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQG-----------KREADACFEIKNSLVQKNYNIPLVADIHFAP--SVALRVAECF 182 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~-----------~~~A~al~~I~~~L~~~g~~iPLVADIHF~~--~~Al~a~~~~ 182 (706)
+.+..++++.+..+.|...+.+-+-. .++.+.++.||+. .|-+++|..|.|-.+ .-|+..++.+
T Consensus 148 ~~e~~~~~a~~~~~~Gf~~~KlKvg~~~~~~~~~~~~~~d~~~v~avR~a---~g~~~~l~vDaN~~w~~~~A~~~~~~L 224 (392)
T 3v5c_A 148 AVALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEV---AGPAGKIMIDANNAYNLNLTKEVLAAL 224 (392)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCTTTTTSCHHHHHHHHHHHHHHHHHH---HCTTCCEEEECTTCCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCccccccccHHHHHHHHHHHHHH---cCCCCcEEeeCCCCcCHHHHHHHHHhc
Confidence 46777889999999999999998764 4667777777773 367899999998654 4555556667
Q ss_pred Cce
Q 005248 183 DKI 185 (706)
Q Consensus 183 ~ki 185 (706)
+.+
T Consensus 225 ~~~ 227 (392)
T 3v5c_A 225 SDV 227 (392)
T ss_dssp TTS
T ss_pred ccC
Confidence 664
No 403
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=44.09 E-value=41 Score=35.31 Aligned_cols=67 Identities=9% Similarity=0.097 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHHHHhhhcCc
Q 005248 115 KDVAGTVEEVMRIAD-QGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDK 184 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~-aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al~a~~~~~k 184 (706)
.|.+..++++.+..+ .|...+.+-+-. .++.+.++.||+. -|-+++|..|.|-. +.-|+..++.++.
T Consensus 146 ~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a---~g~~~~l~vDaN~~~~~~~A~~~~~~l~~ 218 (381)
T 3fcp_A 146 GDTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEA---LGDRASIRVDVNQAWDAATGAKGCRELAA 218 (381)
T ss_dssp SCHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHH---TCTTCEEEEECTTCBCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHH---cCCCCeEEEECCCCCCHHHHHHHHHHHhh
Confidence 467888899988777 699999998753 5677888888875 35679999998865 4445554555554
No 404
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=43.98 E-value=81 Score=32.88 Aligned_cols=90 Identities=14% Similarity=0.242 Sum_probs=61.6
Q ss_pred CceEEEe-ccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH--------------HHHHHHHHHHHhhccCCc-Cccee
Q 005248 102 HPIRVQT-MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK--------------READACFEIKNSLVQKNY-NIPLV 165 (706)
Q Consensus 102 ~PI~VQS-Mt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~--------------~~A~al~~I~~~L~~~g~-~iPLV 165 (706)
-||.|-- +...+..+.+.+++-++.++++|++.|=|+.-+. -..+.++.|++. + ++|++
T Consensus 127 ~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~-----~~~iPVi 201 (350)
T 3b0p_A 127 VPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD-----FPQLTFV 201 (350)
T ss_dssp SCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH-----CTTSEEE
T ss_pred CceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh-----CCCCeEE
Confidence 5777642 3333334566788889999999999998775321 134567778775 5 79999
Q ss_pred eccCC-CHHHHHHHhhhcCceeeCCCCCCcch
Q 005248 166 ADIHF-APSVALRVAECFDKIRVNPGNFADRR 196 (706)
Q Consensus 166 ADIHF-~~~~Al~a~~~~~kiRINPGNig~~~ 196 (706)
|.-=. ++.-|.++++.+|.|=|-=+-+.+++
T Consensus 202 anGgI~s~eda~~~l~GaD~V~iGRa~l~~P~ 233 (350)
T 3b0p_A 202 TNGGIRSLEEALFHLKRVDGVMLGRAVYEDPF 233 (350)
T ss_dssp EESSCCSHHHHHHHHTTSSEEEECHHHHHCGG
T ss_pred EECCcCCHHHHHHHHhCCCEEEECHHHHhCcH
Confidence 87764 78888888777887776555555543
No 405
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=43.82 E-value=74 Score=32.32 Aligned_cols=138 Identities=15% Similarity=0.190 Sum_probs=82.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHH----HHhhh-cCce
Q 005248 113 DTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PSVAL----RVAEC-FDKI 185 (706)
Q Consensus 113 ~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al----~a~~~-~~ki 185 (706)
|..|.+...+-+.++.. .+..+-+-.+=..+ .- +++.+.|++. ..|+++|.+|. |+-.. .+++. +|-+
T Consensus 35 D~~~~~~al~l~~~l~~-~v~~~KvG~~l~~~-~G-~~~v~~Lk~~--g~~VflDlK~~DIpnTv~~a~~~~~~~gaD~v 109 (255)
T 3ldv_A 35 DYDNLADALAFVDKIDP-STCRLKVGKEMFTL-FG-PDFVRELHKR--GFSVFLDLKFHDIPNTCSKAVKAAAELGVWMV 109 (255)
T ss_dssp CCSSHHHHHHHHTTSCG-GGCEEEEEHHHHHH-HH-HHHHHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCHHHHHHHHHHhCC-cCcEEEeCHHHHHh-hC-HHHHHHHHhc--CCCEEEEEecccchhHHHHHHHHHHhcCCCEE
Confidence 44555555554444422 12344444333322 12 2233345544 57899999994 54422 34444 7778
Q ss_pred eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcC--CeEEEec-CCCCCchhHHHhhCCChHHHHHHH
Q 005248 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG--RAVRIGT-NHGSLSDRIMSYYGDSPRGMVESA 262 (706)
Q Consensus 186 RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~--~~IRIGv-N~GSL~~~il~rygdt~eamVeSA 262 (706)
=++| ++.. +-+++.++.++++| .|.=||| -.-|.|..-+...|- +..+-+.+
T Consensus 110 TVh~--~~G~----------------------~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~-~~~~~~~V 164 (255)
T 3ldv_A 110 NVHA--SGGE----------------------RMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGI-LSAPQDHV 164 (255)
T ss_dssp EEEG--GGCH----------------------HHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTC-CSCHHHHH
T ss_pred EEec--cCCH----------------------HHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCC-CCCHHHHH
Confidence 8887 4442 25677888887764 4555664 467888765655442 23455777
Q ss_pred HHHHHHHHHCCCCcEEEE
Q 005248 263 FEFARICRKLDFHNFLFS 280 (706)
Q Consensus 263 le~~~i~e~~~f~~iviS 280 (706)
++.++.+.+.|.+-+|.|
T Consensus 165 ~~~A~~a~~aG~~GvV~s 182 (255)
T 3ldv_A 165 LRLATLTKNAGLDGVVCS 182 (255)
T ss_dssp HHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 899999999999999977
No 406
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=43.81 E-value=1.5e+02 Score=30.63 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=75.5
Q ss_pred HHHHHHhhh-cCceeeCCCC-C-----CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCch
Q 005248 173 SVALRVAEC-FDKIRVNPGN-F-----ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245 (706)
Q Consensus 173 ~~Al~a~~~-~~kiRINPGN-i-----g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~ 245 (706)
+.|..|.++ +|.|-||.|| | -.+.-.-....|-- ......+.+.|-++.+.+.+ +.-+.+||..+.. .+
T Consensus 148 ~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGG-slenr~r~~~eiv~avr~~v-~~pv~vris~~~~-~~- 223 (338)
T 1z41_A 148 QAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGG-SPENRYRFLREIIDEVKQVW-DGPLFVRVSASDY-TD- 223 (338)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCC-ST-
T ss_pred HHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCc-chhhhHHHHHHHHHHHHHHc-CCcEEEEecCccc-CC-
Confidence 455566665 9999999886 1 00000000112211 12333344455555555555 4566777776421 00
Q ss_pred hHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEec-------CChhHHHHHHHHHHHhhhcCCCCCcccccccccCC
Q 005248 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKA-------SNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318 (706)
Q Consensus 246 ~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~Ka-------Snv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~ 318 (706)
-|.+. +.+.++++.+++.|.+-|.+|--. +.+.......+.+.+. ++-|+=
T Consensus 224 -----~g~~~----~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~-----~~iPVi-------- 281 (338)
T 1z41_A 224 -----KGLDI----ADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQ-----ADMATG-------- 281 (338)
T ss_dssp -----TSCCH----HHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-----HCCEEE--------
T ss_pred -----CCCCH----HHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHH-----CCCCEE--------
Confidence 13343 457889999999999999998531 1111122333334333 344542
Q ss_pred CCCCchhhHHHHHHHhhcCCCceeE
Q 005248 319 GEDGRMKSAIGIGTLLQDGLGDTIR 343 (706)
Q Consensus 319 g~~G~IKSavGiG~LL~dGIGDTIR 343 (706)
-.|.|.|.--.-.+|.+|--|-|=
T Consensus 282 -~~Ggi~s~~~a~~~l~~G~aD~V~ 305 (338)
T 1z41_A 282 -AVGMITDGSMAEEILQNGRADLIF 305 (338)
T ss_dssp -ECSSCCSHHHHHHHHHTTSCSEEE
T ss_pred -EECCCCCHHHHHHHHHcCCceEEe
Confidence 235666666666777777556543
No 407
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for struct genomics, riken spring-8 center; 1.99A {Aquifex aeolicus}
Probab=43.46 E-value=90 Score=32.61 Aligned_cols=22 Identities=14% Similarity=0.055 Sum_probs=17.7
Q ss_pred HHHHHcCCCEEEEecCCHHHHHHHH
Q 005248 125 MRIADQGADLVRITVQGKREADACF 149 (706)
Q Consensus 125 ~~L~~aGceiVRvtv~~~~~A~al~ 149 (706)
+.|.++|| .+.|-+..||..+.
T Consensus 74 ~~l~~~G~---~~~vas~~E~~~~~ 95 (420)
T 2p3e_A 74 KLLGELGA---GADIVSGGELYLAK 95 (420)
T ss_dssp HHHHHTTC---EEEESSHHHHHHHH
T ss_pred HHHHHcCC---eEEEeCHHHHHHHH
Confidence 56778997 69999999988664
No 408
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=43.35 E-value=77 Score=31.92 Aligned_cols=74 Identities=12% Similarity=0.011 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEe----cCCH-HHHHHHHHHHHhhccCCcC-cceeeccCCCHHHHH----HHhhh-cC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRIT----VQGK-READACFEIKNSLVQKNYN-IPLVADIHFAPSVAL----RVAEC-FD 183 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvt----v~~~-~~A~al~~I~~~L~~~g~~-iPLVADIHF~~~~Al----~a~~~-~~ 183 (706)
.|.+..++-++++.++||+.+++. +-++ +..+-++.|++. ++ +||.--.|-+.-+|. +|+++ ++
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~-----~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~ 226 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAI-----APAHSLAGHYHDTGGRALDNIRVSLEKGLR 226 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTT-----SCGGGEEEEEBCTTSCHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHh-----CCCCeEEEEECCCcchHHHHHHHHHHhCCC
Confidence 578888888999999999999998 2233 334555666664 55 899866666877764 67776 88
Q ss_pred ceeeCCCCCC
Q 005248 184 KIRVNPGNFA 193 (706)
Q Consensus 184 kiRINPGNig 193 (706)
+|=+.=+-+|
T Consensus 227 ~vd~sv~GlG 236 (295)
T 1ydn_A 227 VFDASVGGLG 236 (295)
T ss_dssp EEEEBTTCCS
T ss_pred EEEeccccCC
Confidence 7775433333
No 409
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=43.28 E-value=37 Score=37.22 Aligned_cols=68 Identities=21% Similarity=0.244 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHcCCCEEEEe------c-------CCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh-cC
Q 005248 119 GTVEEVMRIADQGADLVRIT------V-------QGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FD 183 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRvt------v-------~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-~~ 183 (706)
.|.++++++.++|+|.|.+. . .+.....++.++.+.+++ +++|+|||--. ++.=+.+|+.. ++
T Consensus 279 ~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~--~~iPVIa~GGI~~~~di~kal~~GAd 356 (490)
T 4avf_A 279 ATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEG--TGVPLIADGGIRFSGDLAKAMVAGAY 356 (490)
T ss_dssp CSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTT--TTCCEEEESCCCSHHHHHHHHHHTCS
T ss_pred CcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhcc--CCCcEEEeCCCCCHHHHHHHHHcCCC
Confidence 35677899999999999982 1 012356778888876543 57999997443 34444455554 77
Q ss_pred ceeeC
Q 005248 184 KIRVN 188 (706)
Q Consensus 184 kiRIN 188 (706)
.|=|-
T Consensus 357 ~V~vG 361 (490)
T 4avf_A 357 CVMMG 361 (490)
T ss_dssp EEEEC
T ss_pred eeeec
Confidence 76663
No 410
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=42.94 E-value=40 Score=35.51 Aligned_cols=67 Identities=15% Similarity=0.267 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhhhcCce
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDKI 185 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~~~~ki 185 (706)
+.+...+++.++.+.|..-+.+-+.+ .++.+.+..||+. -|-+++|..|.|- ++.-|+..++.++.+
T Consensus 164 ~~~~~~~~~~~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~---~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 235 (388)
T 4h83_A 164 PLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREA---AGDDFIICIDANQGYKPAVAVDLSRRIADL 235 (388)
T ss_dssp TTCSHHHHHHHHHHHTBSEEEEECSSSCHHHHHHHHHHHHHH---HCSSSEEEEECTTCBCHHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHHHHcCCceEeecCCCCCHHHHHHHHHHHHHh---cCCCeEEEEecCcCCCHHHHHHHHHHhhhc
Confidence 34567788999999999999998733 4667777888775 3678999999885 566666666667654
No 411
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=42.48 E-value=10 Score=39.36 Aligned_cols=139 Identities=17% Similarity=0.275 Sum_probs=85.3
Q ss_pred ecCCCCceEEEecc--CCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccC-----CcCccee----
Q 005248 97 AIGSEHPIRVQTMT--TNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQK-----NYNIPLV---- 165 (706)
Q Consensus 97 ~IGG~~PI~VQSMt--~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~-----g~~iPLV---- 165 (706)
.|||+. +.|.+|. +.|..+.+.+-.++++|.+| |+|=..=.+.+. -+.++.+.+... .-.+.+.
T Consensus 61 ~I~Gd~-v~V~~lvp~g~dPH~yeptp~d~~~l~~A--Dlvv~nG~~lE~--wl~k~~~~~~~~~~v~~s~gi~~~~~~~ 135 (321)
T 1xvl_A 61 NVAGDK-LVVESITRIGAEIHGYEPTPSDIVKAQDA--DLILYNGMNLER--WFEQFLGNVKDVPSVVLTEGIEPIPIAD 135 (321)
T ss_dssp HHHTTT-SEEEESSCSSCCCSSCCCCHHHHHHHHTC--SEEEECCTTSST--THHHHHHTSSSCCEEETTTTCCCCBCCS
T ss_pred HHhCCc-eEEEEecCCCCCcccccCCHHHHHHHhcC--CEEEECCCChHH--HHHHHHHhcCCCcEEEccCCcccccccc
Confidence 367776 8899995 46889999999999999865 666544444552 455555543210 0012222
Q ss_pred ------eccC--CCHHHHHHHhhh-cCc-eeeCCCCCCcchhhccccccc--hHHHHHHHhhHHhhHHHHHHHHHHcCCe
Q 005248 166 ------ADIH--FAPSVALRVAEC-FDK-IRVNPGNFADRRAQFEQLEYT--DDEYQKELQHIEEVFSPLVEKCKKYGRA 233 (706)
Q Consensus 166 ------ADIH--F~~~~Al~a~~~-~~k-iRINPGNig~~~k~F~~~~Yt--deeY~~El~~I~~~f~~vv~~ake~~~~ 233 (706)
.|=| ++|..+...++. .+. ..+.|.|=. .|. -+.|.++|+.++++++..+..++..+++
T Consensus 136 ~~~~~~~DPHvWldp~n~~~~a~~I~~~L~~~DP~~a~---------~Y~~Na~~~~~~L~~Ld~~~~~~l~~~~~~~r~ 206 (321)
T 1xvl_A 136 GPYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAK---------YYNANAAVYSEQLKAIDRQLGADLEQVPANQRF 206 (321)
T ss_dssp SSSTTSBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHH---------HHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCE
T ss_pred cCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHHCcccHH---------HHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCE
Confidence 1222 456666655553 222 237786632 232 2569999999999998888776555555
Q ss_pred EEEecCCCCCchhHHHhhC
Q 005248 234 VRIGTNHGSLSDRIMSYYG 252 (706)
Q Consensus 234 IRIGvN~GSL~~~il~ryg 252 (706)
+ =|.|.++ ..+.++||
T Consensus 207 ~--v~~H~af-~Yfa~~yG 222 (321)
T 1xvl_A 207 L--VSCEGAF-SYLARDYG 222 (321)
T ss_dssp E--EEEESTT-HHHHHHTT
T ss_pred E--EEECchH-HHHHHHCC
Confidence 4 5677776 44666666
No 412
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=42.42 E-value=44 Score=31.57 Aligned_cols=90 Identities=18% Similarity=0.162 Sum_probs=53.5
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHhhh-cCceeeCCCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~~------~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~~~-~~kiRINPGN 191 (706)
.++.++++.++|++.|=++.-+.. .-+.++++++. .++|++|+---+ +.=+.++++. ++.+=+
T Consensus 156 ~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~-----~~~pvia~GGi~~~~~~~~~~~~Ga~~v~v---- 226 (253)
T 1h5y_A 156 AVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS-----VRIPVIASGGAGRVEHFYEAAAAGADAVLA---- 226 (253)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH-----CSSCEEEESCCCSHHHHHHHHHTTCSEEEE----
T ss_pred HHHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh-----cCCCEEEeCCCCCHHHHHHHHHcCCcHHHH----
Confidence 356678888999999987643321 34566777764 579999986554 3444444443 555432
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
|. . -|.. ...+.++++..+++|.++|+
T Consensus 227 -gs-a-l~~~---------------~~~~~~~~~~l~~~g~~~~~ 253 (253)
T 1h5y_A 227 -AS-L-FHFR---------------VLSIAQVKRYLKERGVEVRI 253 (253)
T ss_dssp -SH-H-HHTT---------------SSCHHHHHHHHHHTTCBCCC
T ss_pred -HH-H-HHcC---------------CCCHHHHHHHHHHcCCCCCC
Confidence 11 0 0100 01245677778889998873
No 413
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=42.33 E-value=1e+02 Score=32.26 Aligned_cols=205 Identities=14% Similarity=0.188 Sum_probs=113.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHhhccCCcCccee----eccCCCHHHHHHHhhh--cC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLV----ADIHFAPSVALRVAEC--FD 183 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~------~A~al~~I~~~L~~~g~~iPLV----ADIHF~~~~Al~a~~~--~~ 183 (706)
-.+..+++..++++||+-+|=+-+-+.+ +.+.+.++.+.+|+ .+++.+. +.+.+++.-=++.+.. -|
T Consensus 30 TpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~-~~d~iI~~TTgg~~~~~~eerla~~~~~~Pe 108 (311)
T 3e49_A 30 TPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKS-NTDAVINLTTGGSPHMTVEERLRPATHYMPE 108 (311)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHH-HCCCEEEECSCSCTTSCHHHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHH-hCCcEEEECCCCCCCCCHHHHHHHHHhcCCC
Confidence 3588899999999999999999988843 34444444444444 2665443 5677776543443321 33
Q ss_pred ceeeCCCC--CCc--chhhccccccc-hHHHHHHHh-hH----HhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCC
Q 005248 184 KIRVNPGN--FAD--RRAQFEQLEYT-DDEYQKELQ-HI----EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253 (706)
Q Consensus 184 kiRINPGN--ig~--~~k~F~~~~Yt-deeY~~El~-~I----~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygd 253 (706)
-.=+|.|- |+. -.++|+...++ +..|.+.-. .+ .+.+..+.+.++++|+..=|.+ .+
T Consensus 109 ~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~n~~~~i~~~~~~~~e~Gi~pE~e~----fd--------- 175 (311)
T 3e49_A 109 LASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGTRFEFEC----YD--------- 175 (311)
T ss_dssp EEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTCEEEEEE----CS---------
T ss_pred eeeecCCCcccccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeeEEEE----EC---------
Confidence 44578885 441 11123322222 112332221 11 2356779999999999998887 22
Q ss_pred ChHHHHHHHHHHHHHHHHCCC------CcEEEEEec---CChhHHHHHHHHHHHhhhcCCCCCcccccccccCCCCCCch
Q 005248 254 SPRGMVESAFEFARICRKLDF------HNFLFSMKA---SNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324 (706)
Q Consensus 254 t~eamVeSAle~~~i~e~~~f------~~iviS~Ka---Snv~~~i~ayrlla~~~~~eg~~YPLHLGVTEAG~g~~G~I 324 (706)
-+++..+.. +.+.|. -++|+.++. +++..+. ++...+.++--. + .++.|+=.|-..--..
T Consensus 176 --~g~l~~~~~----l~~~Gl~~~p~~~~~vlGv~~g~~~~~~~L~-~~~~~~~~~~~~--~--~~wsv~~~Gr~~~p~~ 244 (311)
T 3e49_A 176 --TSHLYNLAH----FVDRKLATPPFFVQTVFGLLGGIGPHPEDLA-HMRRTADRLFGA--D--YVWSILGAGRHQIPLA 244 (311)
T ss_dssp --HHHHHHHHH----HHHTTCSCSSEEEEEEESCTTSCCCCHHHHH-HHHHHHHHHHGG--G--EEEEEEECGGGHHHHH
T ss_pred --HHHHHHHHH----HHHcCCCCCCeEEEEEecCCCCCCCCHHHHH-HHHHHHHhhCCC--C--CeEEEEeeChhhHHHH
Confidence 255555444 344454 456666654 5655443 443333332111 2 2455555554443344
Q ss_pred hhHHHHHHHhhcCCCceeEEe
Q 005248 325 KSAIGIGTLLQDGLGDTIRVS 345 (706)
Q Consensus 325 KSavGiG~LL~dGIGDTIRVS 345 (706)
.-|+.+|-=.-=|+.|++..+
T Consensus 245 ~~A~~~GGhvRVGlEDnl~~~ 265 (311)
T 3e49_A 245 SIGAAQGANVRVGLEDSLWIA 265 (311)
T ss_dssp HHHHTTTCEEEECTTTCSEEE
T ss_pred HHHHHcCCCeEEcCCcceecC
Confidence 445555544556777777776
No 414
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=42.29 E-value=75 Score=31.95 Aligned_cols=69 Identities=25% Similarity=0.388 Sum_probs=51.4
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh
Q 005248 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 181 (706)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~ 181 (706)
||++|-. ..|.+++++|.++|.+.+-. |-|-+|--.+ .++.+++ |.++|+++ =+=.=|...-|+.|+++
T Consensus 56 ~Vs~EV~----a~d~e~mi~eA~~L~~~~~n-v~IKIP~T~e--Gl~A~~~-L~~~GI~v--n~TlifS~~QA~~Aa~A 124 (223)
T 3s1x_A 56 PVSVEVV----STKYEGMVEEARKIHGLGDN-AVVKIPMTED--GLRAIKT-LSSEHINT--NCTLVFNPIQALLAAKA 124 (223)
T ss_dssp CEEEECC----CCSHHHHHHHHHHHHHTCTT-EEEEEESSHH--HHHHHHH-HHHTTCCE--EEEEECSHHHHHHHHHT
T ss_pred CEEEEEc----cCCHHHHHHHHHHHHHhCCC-EEEEeCCCHH--HHHHHHH-HHHCCCcE--EEEEeCCHHHHHHHHHc
Confidence 9999965 48999999999999999855 5588887654 4555543 45557653 33445899999999986
No 415
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=42.25 E-value=2.9e+02 Score=28.00 Aligned_cols=128 Identities=12% Similarity=0.155 Sum_probs=73.2
Q ss_pred HHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCcchh
Q 005248 121 VEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRA 197 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRINPGNig~~~k 197 (706)
-.|+.+..++|+|.|=+-+. +.++.+.+....+ + +.+.++.++|= ..-+..|.+. ++-|=|||-|...
T Consensus 125 ~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~---~--lGl~~lvev~t-~ee~~~A~~~Gad~IGv~~r~l~~--- 195 (272)
T 3qja_A 125 PYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTE---S--LGMTALVEVHT-EQEADRALKAGAKVIGVNARDLMT--- 195 (272)
T ss_dssp HHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHH---H--TTCEEEEEESS-HHHHHHHHHHTCSEEEEESBCTTT---
T ss_pred HHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHH---H--CCCcEEEEcCC-HHHHHHHHHCCCCEEEECCCcccc---
Confidence 34888888999999988433 3344443333333 2 45667889985 4445566665 8888899766432
Q ss_pred hccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcE
Q 005248 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277 (706)
Q Consensus 198 ~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~i 277 (706)
|.... +.+..+++...+ ++|+ | . .|-+ .|+ +.++.+.+.|++-+
T Consensus 196 -~~~dl--------------~~~~~l~~~v~~-~~pv-V-a-egGI---------~t~--------edv~~l~~~Gadgv 239 (272)
T 3qja_A 196 -LDVDR--------------DCFARIAPGLPS-SVIR-I-A-ESGV---------RGT--------ADLLAYAGAGADAV 239 (272)
T ss_dssp -CCBCT--------------THHHHHGGGSCT-TSEE-E-E-ESCC---------CSH--------HHHHHHHHTTCSEE
T ss_pred -cccCH--------------HHHHHHHHhCcc-cCEE-E-E-ECCC---------CCH--------HHHHHHHHcCCCEE
Confidence 33111 112222222111 4444 1 1 1111 234 45666778899888
Q ss_pred EEE---EecCChhHHHHHH
Q 005248 278 LFS---MKASNPVVMVQAY 293 (706)
Q Consensus 278 viS---~KaSnv~~~i~ay 293 (706)
+|- ||+.|+...++..
T Consensus 240 lVGsal~~a~dp~~~~~~l 258 (272)
T 3qja_A 240 LVGEGLVTSGDPRAAVADL 258 (272)
T ss_dssp EECHHHHTCSCHHHHHHHH
T ss_pred EEcHHHhCCCCHHHHHHHH
Confidence 885 7888988766553
No 416
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=42.20 E-value=1.1e+02 Score=32.44 Aligned_cols=69 Identities=7% Similarity=0.199 Sum_probs=50.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec--------------------CC--------HHHHHHHHHHHHhhccCCcCccee
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITV--------------------QG--------KREADACFEIKNSLVQKNYNIPLV 165 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv--------------------~~--------~~~A~al~~I~~~L~~~g~~iPLV 165 (706)
..+.+..++++.++.+.|...+.+-+ |+ ..+.+.++.||+. -|-++||.
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~a---vG~d~~l~ 217 (409)
T 3go2_A 141 VTDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDG---AGPDVEIL 217 (409)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHH---HCTTSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHH---hCCCCEEE
Confidence 35788999999999999999999987 11 1235667777764 36789999
Q ss_pred eccC--CCHHHHHHHhhhcCce
Q 005248 166 ADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 166 ADIH--F~~~~Al~a~~~~~ki 185 (706)
.|.| |+..-|+..++.+++.
T Consensus 218 vDaN~~~~~~~A~~~~~~L~~~ 239 (409)
T 3go2_A 218 LDLNFNAKPEGYLKILRELADF 239 (409)
T ss_dssp EECTTCSCHHHHHHHHHHTTTS
T ss_pred EECCCCCCHHHHHHHHHHHhhc
Confidence 9988 4555566666666654
No 417
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=42.18 E-value=40 Score=34.73 Aligned_cols=67 Identities=15% Similarity=0.101 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
+.+..++++.++.+.|...+.+-+-. .++.+.+..||+.+ |-+++|..|-| |++.-|+..++.++++
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~~---g~~~~L~vDaN~~~~~~~A~~~~~~l~~~ 187 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAAL---PPGAKLRLDANGSWDRATANRWFAWLDRH 187 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHHS---CTTCEEEEECTTCCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHHc---CCCCEEEEcccCCCCHHHHHHHHHHHHhh
Confidence 45678899999999999999998753 46677888888753 55689999987 4566666666666665
No 418
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=42.07 E-value=54 Score=32.81 Aligned_cols=63 Identities=14% Similarity=0.281 Sum_probs=48.9
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCc------ceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNI------PLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~i------PLVADIHF~~~~Al~a~~~-~~kiRINPGNi 192 (706)
|.+|.++..+||++++=- |+. ..+-++..++ +.+ |++.++ ++|.=++.|.++ +|-|-+-|+..
T Consensus 74 t~~~a~~ai~AGA~fivs--P~~-~~evi~~~~~------~~v~~~~~~~~~PG~-~TptE~~~A~~~Gad~vK~FPa~~ 143 (217)
T 3lab_A 74 TADDFQKAIDAGAQFIVS--PGL-TPELIEKAKQ------VKLDGQWQGVFLPGV-ATASEVMIAAQAGITQLKCFPASA 143 (217)
T ss_dssp SHHHHHHHHHHTCSEEEE--SSC-CHHHHHHHHH------HHHHCSCCCEEEEEE-CSHHHHHHHHHTTCCEEEETTTTT
T ss_pred CHHHHHHHHHcCCCEEEe--CCC-cHHHHHHHHH------cCCCccCCCeEeCCC-CCHHHHHHHHHcCCCEEEECcccc
Confidence 688999999999999943 443 2233333333 457 999999 999999999997 99999999874
No 419
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=41.97 E-value=3.4e+02 Score=28.74 Aligned_cols=155 Identities=13% Similarity=0.142 Sum_probs=99.0
Q ss_pred CHHHHHHHHHHHHHc-CCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHHHHhhhcCceeeCCC
Q 005248 116 DVAGTVEEVMRIADQ-GADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDKIRVNPG 190 (706)
Q Consensus 116 Dv~atv~Qi~~L~~a-GceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al~a~~~~~kiRINPG 190 (706)
+.+..++++.++.+. |...+.+-+- -.++.+.++.||+.+ -+++|..|.|-. +.-|+..++.++.+
T Consensus 168 ~~e~~~~~a~~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~----~~~~l~vDaN~~w~~~~A~~~~~~l~~~----- 238 (398)
T 4dye_A 168 LPKAMAEHAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREAL----PGVNLRVDPNAAWSVPDSVRAGIALEEL----- 238 (398)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEECCSCHHHHHHHHHHHHHHC----TTSEEEEECTTCSCHHHHHHHHHHHGGG-----
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhC----CCCeEEeeCCCCCCHHHHHHHHHHHhhc-----
Confidence 468899999999999 9999999883 357788888888864 358999998754 44455555555553
Q ss_pred CCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCch--hHHHhhC-C----Ch--HHHHHH
Q 005248 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD--RIMSYYG-D----SP--RGMVES 261 (706)
Q Consensus 191 Nig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~--~il~ryg-d----t~--eamVeS 261 (706)
|+-- ||+-. . .+..+-+.+++.++||=.|=+.-++.+ ++++.-. | .+ -|=+..
T Consensus 239 ~i~~----iEqP~-------------~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~ 300 (398)
T 4dye_A 239 DLEY----LEDPC-------------V-GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAA 300 (398)
T ss_dssp CCSE----EECCS-------------S-HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHH
T ss_pred CCCE----EcCCC-------------C-CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHH
Confidence 2211 22221 1 234455556677888877766666654 3343322 2 12 222678
Q ss_pred HHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHHh
Q 005248 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 262 Ale~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~~ 299 (706)
|++-+++|+..|.. +.++. .+.......|.-.|+..
T Consensus 301 ~~~ia~~A~~~gi~-~~~h~-~~e~~i~~aa~l~laaa 336 (398)
T 4dye_A 301 TKALAAHCETFGLG-MNLHS-GGELGIATAAHLAVVSS 336 (398)
T ss_dssp HHHHHHHHHHHTCE-EEECC-SCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCe-EEEcC-CcchHHHHHHHHHHHhc
Confidence 89999999999875 34444 44455555666556654
No 420
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=41.86 E-value=56 Score=33.85 Aligned_cols=59 Identities=10% Similarity=0.085 Sum_probs=42.2
Q ss_pred CceEEEeccCCC--CCCHHHHHHHHHHHHHcCCCEEEEe--cCCHHHHHHHHHHHHhhccCCcCcceee
Q 005248 102 HPIRVQTMTTND--TKDVAGTVEEVMRIADQGADLVRIT--VQGKREADACFEIKNSLVQKNYNIPLVA 166 (706)
Q Consensus 102 ~PI~VQSMt~t~--T~Dv~atv~Qi~~L~~aGceiVRvt--v~~~~~A~al~~I~~~L~~~g~~iPLVA 166 (706)
-+.+||-=|... ...++.+++..+.+++|||+.|=+- +|+.++++.+ .+.+. -++|+++
T Consensus 152 ~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i---~~~~~---~~~P~i~ 214 (295)
T 1s2w_A 152 PDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAF---MKAWN---NQGPVVI 214 (295)
T ss_dssp TTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHH---HHHHT---TCSCEEE
T ss_pred CCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHH---HHHcC---CCCCEEE
Confidence 357777766543 3568999999999999999999994 6777776554 44422 2378753
No 421
>4ecl_A Serine racemase, vantg; antibiotic resistance, vancomycin resistance, center for STR genomics of infectious diseases (csgid); HET: MSE; 2.02A {Enterococcus faecalis}
Probab=41.76 E-value=30 Score=36.42 Aligned_cols=47 Identities=13% Similarity=0.034 Sum_probs=29.4
Q ss_pred HHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhh
Q 005248 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180 (706)
Q Consensus 125 ~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~ 180 (706)
+.|.++||+ .+.|.+.+||..+. +.|++.|++-=-|+.+.-+..+++
T Consensus 51 ~~l~~~G~~--~f~va~~~Ea~~lr-------~~G~~~~ilvlg~~~~~~~~~~~~ 97 (374)
T 4ecl_A 51 TYLEQIGVS--SFAVATIDEGIRLR-------KYGISSEILILGYTSPSRAKELCK 97 (374)
T ss_dssp HHHHHTTCC--EEEESSHHHHHHHH-------HTTCCSEEEECSCCCGGGHHHHHH
T ss_pred HHHHHCCCC--EEEEEEHHHHHHHH-------hcCCCCCEEEEeCCCHHHHHHHHH
Confidence 456789987 57888888887643 347776654224555554444444
No 422
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=41.54 E-value=1.4e+02 Score=31.27 Aligned_cols=100 Identities=11% Similarity=0.199 Sum_probs=62.7
Q ss_pred HHHHHHHHHHc--CCCEEEEecC---CHHHHHHHHHHHHhhccCCc-Ccceee-ccCCCHHHHHHHhhh-cCceee-C-C
Q 005248 120 TVEEVMRIADQ--GADLVRITVQ---GKREADACFEIKNSLVQKNY-NIPLVA-DIHFAPSVALRVAEC-FDKIRV-N-P 189 (706)
Q Consensus 120 tv~Qi~~L~~a--GceiVRvtv~---~~~~A~al~~I~~~L~~~g~-~iPLVA-DIHF~~~~Al~a~~~-~~kiRI-N-P 189 (706)
..+++..+.++ |++++=+.+. .....+.+++||+. + ++|+++ ++ .++.-|..|+++ +|-|-+ | |
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~-----~~~~~vi~g~v-~t~e~A~~a~~aGaD~I~v~~g~ 192 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKR-----FPQHTIMAGNV-VTGEMVEELILSGADIIKVGIGP 192 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHH-----CTTSEEEEEEE-CSHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHh-----cCCCeEEEEeC-CCHHHHHHHHHhCCCEEEECCCC
Confidence 35678888887 9999888753 23455677888775 4 689874 54 678999999987 998877 2 4
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
|.+...+ .+...-. -.-..+.++.+.+++.++|+=.
T Consensus 193 G~~~~~r-~~~g~~~----------p~~~~l~~v~~~~~~~~ipvIa 228 (351)
T 2c6q_A 193 GSVCTTR-KKTGVGY----------PQLSAVMECADAAHGLKGHIIS 228 (351)
T ss_dssp STTBCHH-HHHCBCC----------CHHHHHHHHHHHHHHTTCEEEE
T ss_pred CcCcCcc-ccCCCCc----------cHHHHHHHHHHHHhhcCCcEEE
Confidence 4332111 0110000 0112345677778888899843
No 423
>4a3q_A Alanine racemase 1; isomerase, PLP-dependent enzymes; HET: PLP; 2.15A {Staphylococcus aureus} PDB: 3oo2_A
Probab=41.46 E-value=65 Score=34.24 Aligned_cols=103 Identities=13% Similarity=0.102 Sum_probs=60.1
Q ss_pred HHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhcccccc
Q 005248 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204 (706)
Q Consensus 125 ~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~Y 204 (706)
+.|.++||+ .++|.+.+||..+ ++.|++.|++.=-|+.+.-+..++++ +|-| .+.+
T Consensus 52 ~~l~~~G~~--~f~Va~~~Ea~~l-------r~aGi~~~ilvlg~~~~~~~~~~~~~----~i~~-~V~s---------- 107 (382)
T 4a3q_A 52 RHLMENGAT--FFAVATLDEAIEL-------RMHGITAKILVLGVLPAKDIDKAIQH----RVAL-TVPS---------- 107 (382)
T ss_dssp HHHHHTTCC--EEEESSHHHHHHH-------HTTTCCSEEEECSCCCGGGHHHHHHT----TCBE-EECC----------
T ss_pred HHHHHCCCC--EEEEeEHHHHHHH-------HhCCCCCCEEEEeCCCHHHHHHHHHc----CCEE-EECC----------
Confidence 567889987 4788888888764 34588777643245555544444442 2222 1212
Q ss_pred chHHHHHHHhhHHhhHHHHHHHHHHcCC-e--EEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHC
Q 005248 205 TDDEYQKELQHIEEVFSPLVEKCKKYGR-A--VRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272 (706)
Q Consensus 205 tdeeY~~El~~I~~~f~~vv~~ake~~~-~--IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~ 272 (706)
.+.++.+-+.|++.|. + +-|=+|.| |.|.|-.|+. .+.+.++.+.++
T Consensus 108 ------------~~~l~~l~~~a~~~~~~~~~V~lkvDtG------m~R~G~~~~e---~~~~~~~~i~~~ 157 (382)
T 4a3q_A 108 ------------KQWLKEAIKNISGEQEKKLWLHIKLDTG------MGRLGIKDTN---TYQEVIEIIQQY 157 (382)
T ss_dssp ------------HHHHHHHHHTCCTTCCSCEEEEEEBCSS------SSSSSBCCHH---HHHHHHHHHHHC
T ss_pred ------------HHHHHHHHHHHHHcCCCceeEEEEECCC------CCcCCCChHH---HHHHHHHHHHhC
Confidence 1134445566776666 4 55678988 5789966643 244455545443
No 424
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=41.31 E-value=51 Score=35.80 Aligned_cols=69 Identities=14% Similarity=0.204 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhH
Q 005248 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVF 220 (706)
Q Consensus 144 ~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f 220 (706)
+-+.++++++ .+++||.+|=+. +..-+..+++ +++-+.+.|...|.-. ..
T Consensus 272 d~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGit----------------------ea 324 (445)
T 3va8_A 272 EIEGMAAVAK-----EASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLR----------------------KS 324 (445)
T ss_dssp HHHHHHHHHT-----TCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHH----------------------HH
T ss_pred CHHHHHHHHH-----cCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHH----------------------HH
Confidence 4556666666 478999999654 3444444444 5899999999998733 45
Q ss_pred HHHHHHHHHcCCeEEEecC
Q 005248 221 SPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 221 ~~vv~~ake~~~~IRIGvN 239 (706)
..+...|+++|+++=++.+
T Consensus 325 ~kia~lA~~~gv~v~~h~~ 343 (445)
T 3va8_A 325 QTLASICATWGLRLSMHSN 343 (445)
T ss_dssp HHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHcCCEEEEeCC
Confidence 7799999999999766544
No 425
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=41.22 E-value=57 Score=31.94 Aligned_cols=77 Identities=17% Similarity=0.155 Sum_probs=50.5
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEec---CCHHHHHHHHHHHHhhccCCcCcceee--ccCCCHHHHHH
Q 005248 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV---QGKREADACFEIKNSLVQKNYNIPLVA--DIHFAPSVALR 177 (706)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv---~~~~~A~al~~I~~~L~~~g~~iPLVA--DIHF~~~~Al~ 177 (706)
|+.|.=+..+.-.|-+..++-++.+.++|+|.|+..+ ++-...+.++.+++.+ +.++|++| +|+ ++.-|++
T Consensus 117 pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v---~~~ipVia~GGI~-t~~da~~ 192 (225)
T 1mzh_A 117 SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSA---KGRIKVKASGGIR-DLETAIS 192 (225)
T ss_dssp TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHH---TTSSEEEEESSCC-SHHHHHH
T ss_pred CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHh---CCCCcEEEECCCC-CHHHHHH
Confidence 5555544444444555666777788999999997776 2223456777777753 34677766 466 6888888
Q ss_pred Hhhh-cC
Q 005248 178 VAEC-FD 183 (706)
Q Consensus 178 a~~~-~~ 183 (706)
.++. ++
T Consensus 193 ~l~aGA~ 199 (225)
T 1mzh_A 193 MIEAGAD 199 (225)
T ss_dssp HHHTTCS
T ss_pred HHHhCch
Confidence 7775 66
No 426
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=41.09 E-value=54 Score=36.06 Aligned_cols=77 Identities=16% Similarity=0.274 Sum_probs=54.7
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcCCCEEEEe----cCCHHH-HHHHHHHHHhhccCCcCcceeeccCCCHHHHH----HH
Q 005248 108 TMTTNDTKDVAGTVEEVMRIADQGADLVRIT----VQGKRE-ADACFEIKNSLVQKNYNIPLVADIHFAPSVAL----RV 178 (706)
Q Consensus 108 SMt~t~T~Dv~atv~Qi~~L~~aGceiVRvt----v~~~~~-A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al----~a 178 (706)
||+.....|.+..++-++++.++||+.|++. +-.+.+ .+-++.+++. +++||=.=.|-|.-+|+ +|
T Consensus 148 ~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~-----~~~~i~~H~Hnd~GlAvAN~laA 222 (464)
T 2nx9_A 148 CYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQ-----VDVELHLHCHSTAGLADMTLLKA 222 (464)
T ss_dssp ECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHH-----CCSCEEEEECCTTSCHHHHHHHH
T ss_pred EeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHh-----cCCeEEEEECCCCChHHHHHHHH
Confidence 5665566799999999999999999999996 333444 4455667665 46888777777777766 55
Q ss_pred hhh-cCcee--eCC
Q 005248 179 AEC-FDKIR--VNP 189 (706)
Q Consensus 179 ~~~-~~kiR--INP 189 (706)
+++ ++-|= |||
T Consensus 223 v~AGa~~VD~ti~g 236 (464)
T 2nx9_A 223 IEAGVDRVDTAISS 236 (464)
T ss_dssp HHTTCSEEEEBCGG
T ss_pred HHhCCCEEEEeccc
Confidence 565 65444 553
No 427
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=41.04 E-value=54 Score=35.61 Aligned_cols=69 Identities=12% Similarity=0.185 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhH
Q 005248 144 EADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVF 220 (706)
Q Consensus 144 ~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f 220 (706)
+-+.+.+++++ +++||.+|=+.. ..-+..+++ ++|-+.+.|...|.-. ..
T Consensus 274 ~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGit----------------------ea 326 (445)
T 3vdg_A 274 GLDGMAEVAAQ-----APMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQ----------------------RS 326 (445)
T ss_dssp SHHHHHHHHHH-----CSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHH----------------------HH
T ss_pred CHHHHHHHHhc-----CCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHH----------------------HH
Confidence 34566777774 789999996543 444444443 5888999999998733 46
Q ss_pred HHHHHHHHHcCCeEEEecC
Q 005248 221 SPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 221 ~~vv~~ake~~~~IRIGvN 239 (706)
..+...|+++|+++=++.+
T Consensus 327 ~kia~lA~~~gv~v~~h~~ 345 (445)
T 3vdg_A 327 RLLAGICDTFGLGLSMHSN 345 (445)
T ss_dssp HHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHcCCEEEEeCC
Confidence 7799999999998755543
No 428
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=40.92 E-value=56 Score=35.09 Aligned_cols=84 Identities=19% Similarity=0.346 Sum_probs=55.6
Q ss_pred cCCCC--ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC--CH-------------------------------
Q 005248 98 IGSEH--PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ--GK------------------------------- 142 (706)
Q Consensus 98 IGG~~--PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~--~~------------------------------- 142 (706)
+||.. .|.+=..+ ...|.+..++++.+..+.|...+.+-+- +.
T Consensus 131 LGG~~r~~v~~y~~~--~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (426)
T 4e4f_A 131 LGGASRTGVMVYCHT--TGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTE 208 (426)
T ss_dssp HTCCSSSSEEEEEEE--CCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHH
T ss_pred cCCCCCCceeEeEeC--CCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchh
Confidence 56642 35443322 3357899999999999999999998752 11
Q ss_pred ----HHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCcee
Q 005248 143 ----READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (706)
Q Consensus 143 ----~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~kiR 186 (706)
...+.++.||+. -|-++||..|.| |+..-|+..++.++++.
T Consensus 209 ~~~~~~~e~v~avR~a---~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~ 255 (426)
T 4e4f_A 209 KYLDFTPKLFEAVRDK---FGFNEHLLHDMHHRLTPIEAARFGKSVEDYR 255 (426)
T ss_dssp HHHHHHHHHHHHHHHH---HTTSSEEEEECTTCSCHHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHHHHHH---hCCCCEEEEECCCCCCHHHHHHHHHHHhhcC
Confidence 023566777765 356899999988 45556666666666653
No 429
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=40.80 E-value=2.3e+02 Score=26.42 Aligned_cols=63 Identities=21% Similarity=0.190 Sum_probs=40.1
Q ss_pred HHHHHHHcCCCEEEEecCCH-HH-HHHHHHHHHhhccCCcCcceeecc-CC-CH-HHHHHHhhh-cCceeeCCCC
Q 005248 123 EVMRIADQGADLVRITVQGK-RE-ADACFEIKNSLVQKNYNIPLVADI-HF-AP-SVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 123 Qi~~L~~aGceiVRvtv~~~-~~-A~al~~I~~~L~~~g~~iPLVADI-HF-~~-~~Al~a~~~-~~kiRINPGN 191 (706)
++.++.++|++.|=+-.-.. +. .+.++.+++ +.++++.|+ +- ++ ..+..+.+. ++-|=+|||-
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~------~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~ 137 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKE------AGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGT 137 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHH------HTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCH
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHH------cCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCC
Confidence 48889999999988865432 33 333444444 345666663 32 23 556677776 8888888873
No 430
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=40.64 E-value=2.2e+02 Score=29.15 Aligned_cols=79 Identities=13% Similarity=0.096 Sum_probs=53.0
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh
Q 005248 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 181 (706)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~ 181 (706)
.|+-|+-|...+ + ..+++..+.++|+++|-+..-.. .+-++.+++ ..+|++..++ +...|..+.+.
T Consensus 78 ~p~gVnl~~~~~--~---~~~~~~~~~~~g~d~V~l~~g~p--~~~~~~l~~------~g~~v~~~v~-s~~~a~~a~~~ 143 (326)
T 3bo9_A 78 KPFGVNIILVSP--W---ADDLVKVCIEEKVPVVTFGAGNP--TKYIRELKE------NGTKVIPVVA-SDSLARMVERA 143 (326)
T ss_dssp SCEEEEEETTST--T---HHHHHHHHHHTTCSEEEEESSCC--HHHHHHHHH------TTCEEEEEES-SHHHHHHHHHT
T ss_pred CCEEEEEeccCC--C---HHHHHHHHHHCCCCEEEECCCCc--HHHHHHHHH------cCCcEEEEcC-CHHHHHHHHHc
Confidence 466677665322 2 24566777889999999987654 344455554 3578888885 57778887776
Q ss_pred -cCceeeCCCCCCc
Q 005248 182 -FDKIRVNPGNFAD 194 (706)
Q Consensus 182 -~~kiRINPGNig~ 194 (706)
+|-|=+.....|.
T Consensus 144 GaD~i~v~g~~~GG 157 (326)
T 3bo9_A 144 GADAVIAEGMESGG 157 (326)
T ss_dssp TCSCEEEECTTSSE
T ss_pred CCCEEEEECCCCCc
Confidence 9999985434443
No 431
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=40.40 E-value=77 Score=29.90 Aligned_cols=61 Identities=15% Similarity=0.196 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcCCCEEEEecCCH--HH----HHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCceee
Q 005248 120 TVEEVMRIADQGADLVRITVQGK--RE----ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRV 187 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~--~~----A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~kiRI 187 (706)
.+++++++.++|+++|=+..++. ++ .+.+..+++... .+.+|++.+=+ ..+ |.+. ++.|.+
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~--~~~v~v~v~~~--~~~---a~~~gad~v~l 100 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACR--EAGVPFIVNDD--VEL---ALNLKADGIHI 100 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHH--HHTCCEEEESC--HHH---HHHHTCSEEEE
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHH--HcCCeEEEcCH--HHH---HHHcCCCEEEE
Confidence 78899999999999998886542 22 233333333222 36688887522 233 3343 777877
No 432
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=40.35 E-value=44 Score=36.08 Aligned_cols=67 Identities=16% Similarity=0.241 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHcCCCEEEEec--------C-----CHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh-cC
Q 005248 119 GTVEEVMRIADQGADLVRITV--------Q-----GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FD 183 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRvtv--------~-----~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-~~ 183 (706)
.|.+++++++++|+|.|-+-. . +.-...+++++++.++ ..++|+|||-=. ++.-+.+|+.. ++
T Consensus 193 ~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~--~~~IPVIA~GGI~~~~di~kalalGAd 270 (400)
T 3ffs_A 193 VTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVAS--KFGIPIIADGGIRYSGDIGKALAVGAS 270 (400)
T ss_dssp CSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHT--TTTCCEEEESCCCSHHHHHHHHTTTCS
T ss_pred CCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHH--hcCCCEEecCCCCCHHHHHHHHHcCCC
Confidence 367889999999999999821 0 1224567777776543 367999997443 34444455554 66
Q ss_pred ceee
Q 005248 184 KIRV 187 (706)
Q Consensus 184 kiRI 187 (706)
.|=|
T Consensus 271 ~V~v 274 (400)
T 3ffs_A 271 SVMI 274 (400)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6644
No 433
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=40.28 E-value=62 Score=30.28 Aligned_cols=142 Identities=14% Similarity=0.139 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceee--------ccCC----CHHHHHHHhhh-c
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA--------DIHF----APSVALRVAEC-F 182 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVA--------DIHF----~~~~Al~a~~~-~ 182 (706)
|.+.-.+++..+...+++-+=+...+....+.+..+++ ..+|+|. ++++ |+..+..|+++ +
T Consensus 43 ~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~------~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~ 116 (272)
T 3o74_A 43 QPDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQD------KGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLL 116 (272)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHH------TTCCEEEESSCCCTTTCEEEEECHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHH------cCCCEEEEccCCCccccCEEEEchHHHHHHHHHHHH
Q ss_pred CceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCc--------hhHHHhhCCC
Q 005248 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS--------DRIMSYYGDS 254 (706)
Q Consensus 183 ~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~--------~~il~rygdt 254 (706)
++ ..++|+--... ......+++..-+.+.++++|+++.+ +-.+..+ +++++++...
T Consensus 117 ~~---G~~~i~~i~~~------------~~~~~~~~R~~gf~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (272)
T 3o74_A 117 SS---APRSIALIGAR------------PELSVSQARAGGFDEALQGYTGEVRR-YQGEAFSRECGQRLMQQLIDDLGGL 180 (272)
T ss_dssp TT---CCSEEEEEEEC------------TTSHHHHHHHHHHHHHTTTCCSEEEE-EEESSSSHHHHHHHHHHHHHHHTSC
T ss_pred HC---CCcEEEEEecC------------CCCccHHHHHHHHHHHHHHcCCChhe-eecCCCCHHHHHHHHHHHHhcCCCC
Q ss_pred hHHHH----HHHHHHHHHHHHCCC--CcEEE
Q 005248 255 PRGMV----ESAFEFARICRKLDF--HNFLF 279 (706)
Q Consensus 255 ~eamV----eSAle~~~i~e~~~f--~~ivi 279 (706)
|.|++ ..|+..++.|++.|+ +||.|
T Consensus 181 ~~ai~~~~d~~a~g~~~al~~~g~vp~di~v 211 (272)
T 3o74_A 181 PDALVTTSYVLLQGVFDTLQARPVDSRQLQL 211 (272)
T ss_dssp CSEEEESSHHHHHHHHHHHHTSCGGGCCCEE
T ss_pred CcEEEEeCchHHHHHHHHHHHcCCCccceEE
No 434
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=40.16 E-value=55 Score=32.20 Aligned_cols=47 Identities=13% Similarity=-0.002 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceee
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVA 166 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVA 166 (706)
|-+.+.-.+...++.+.|| ||++++. +.++.-.|-+...+ .+.|+||
T Consensus 121 tp~~~el~~~~~~~~~~ga-ivKia~~a~~~~D~l~ll~~~~~-----~~~P~I~ 169 (219)
T 2egz_A 121 TPPNWIIREVLREGYRYGG-IPKIAVKANSYEDVARLLCISRQ-----VEGEKIL 169 (219)
T ss_dssp CCCHHHHHHHHHHHHHTTS-EEEEEEECSSHHHHHHHHHHHTT-----SCSCBEE
T ss_pred CcCHHHHHHHHHHHHHcCC-EEEEEEccCCHHHHHHHHHHHHh-----CCCCEEE
Confidence 4446778888899999999 9999965 55666666666553 4677765
No 435
>2dy3_A Alanine racemase; alpha/beta barrel, isomerase; HET: PLP; 2.10A {Corynebacterium glutamicum}
Probab=40.13 E-value=39 Score=34.69 Aligned_cols=70 Identities=16% Similarity=0.119 Sum_probs=37.7
Q ss_pred CCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEE---E--EecC---C---hhHHHHHHHHHHHh
Q 005248 231 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF---S--MKAS---N---PVVMVQAYRLLVAE 299 (706)
Q Consensus 231 ~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~ivi---S--~KaS---n---v~~~i~ayrlla~~ 299 (706)
...+.|=+|.| |+|+|-+++. +.+.++.+.++. ++.+ . +-+. + .....+..+.++++
T Consensus 116 ~~~v~l~vdtG------~~R~G~~~~~----~~~~~~~~~~~~--~l~~~Gl~tH~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (361)
T 2dy3_A 116 HIRVSIKIDSG------LHRSGVDEQE----WEGVFSALAAAP--HIEVTGMFTHLACADEPENPETDRQIIAFRRALAL 183 (361)
T ss_dssp CEEEEEEBCCS------SCSSSBCHHH----HHHHHHHHHTCT--TEEEEEEECCCC--------CHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCC------CCCCCCCHHH----HHHHHHHHHhCC--CCCEEEEEecCCCcCCCCcHHHHHHHHHHHHHHHH
Confidence 46788888988 5789966653 344555555532 2211 0 1111 1 22334555666666
Q ss_pred hhcCCCCCc-cccc
Q 005248 300 MYVHGWDYP-LHLG 312 (706)
Q Consensus 300 ~~~eg~~YP-LHLG 312 (706)
+.+.|.+.+ +|+|
T Consensus 184 l~~~g~~~~~~~~g 197 (361)
T 2dy3_A 184 ARKHGLECPVNHVC 197 (361)
T ss_dssp HHHTTCCCCSCBCC
T ss_pred HHhcCCCCCeEEEe
Confidence 666666555 5655
No 436
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=40.11 E-value=1.4e+02 Score=30.48 Aligned_cols=86 Identities=13% Similarity=0.166 Sum_probs=59.6
Q ss_pred HHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHhhccCCcCccee-eccCCCHHHHHHHhhh-cCceeeCCCCCCcc
Q 005248 121 VEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPLV-ADIHFAPSVALRVAEC-FDKIRVNPGNFADR 195 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~---~~A~al~~I~~~L~~~g~~iPLV-ADIHF~~~~Al~a~~~-~~kiRINPGNig~~ 195 (706)
+++.+..+++|+.-++|-+... -..+.|..|++. +++|++ -|+=.++--..+|..+ +|.|=++---+.+
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~-----v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~- 155 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQA-----CSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDD- 155 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHT-----SSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCH-
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHh-----cCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCH-
Confidence 5677888999999999865322 256788888874 789975 4766676666666665 8888876655522
Q ss_pred hhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 196 ~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
+.+..+++.|+++|.-+
T Consensus 156 ----------------------~~l~~l~~~a~~lGl~~ 172 (272)
T 3tsm_A 156 ----------------------DLAKELEDTAFALGMDA 172 (272)
T ss_dssp ----------------------HHHHHHHHHHHHTTCEE
T ss_pred ----------------------HHHHHHHHHHHHcCCeE
Confidence 24566777777776543
No 437
>3kw3_A Alanine racemase; niaid, ssgcid, seattle structural genomics center for infect disease, iodide SOAK, LLP, CAT-scratch DI isomerase; HET: LLP; 2.04A {Bartonella henselae}
Probab=40.09 E-value=64 Score=34.17 Aligned_cols=105 Identities=16% Similarity=0.116 Sum_probs=55.8
Q ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCC-cCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhcccc
Q 005248 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKN-YNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQL 202 (706)
Q Consensus 124 i~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g-~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~ 202 (706)
++.|.++||+ .++|.+.+||..+.+ .| ++.|++-=-|..+.-+..++++ +|-| .+.+
T Consensus 63 a~~l~~~G~~--~f~Va~~~Ea~~lr~-------ag~~~~~ilvl~~~~~~~~~~~~~~----~i~~-~V~s-------- 120 (376)
T 3kw3_A 63 APALYQAGCR--TFFVAQIEEALQLKA-------VLPENVMIALLNGFPHKAEEFVAQS----GIIP-LLNS-------- 120 (376)
T ss_dssp HHHHHHTTCC--EEEESSHHHHHHHHH-------HSCSSCEEEETTCCCTTCHHHHHHT----TCEE-EECS--------
T ss_pred HHHHHHcCCC--EEEEeEHHHHHHHHh-------cCCCCCCEEEEeCCCHHHHHHHHHC----CCEE-EECC--------
Confidence 4567889987 478888888876543 25 5556432122223322233332 2222 1211
Q ss_pred ccchHHHHHHHhhHHhhHHHHHHHHHHcCC--eEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHH
Q 005248 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK 271 (706)
Q Consensus 203 ~YtdeeY~~El~~I~~~f~~vv~~ake~~~--~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~ 271 (706)
.+.++.+-+.|++.+. ++-|=||.| |.|+|-.|+. +..+++.++-+..
T Consensus 121 --------------~~~l~~l~~~a~~~~~~~~V~lkVdtG------m~R~G~~~~e-~~~l~~~i~~~~~ 170 (376)
T 3kw3_A 121 --------------WSTIEDWQTLCQKKNKKFPAIIQVDTN------MSRLGLDKKE-LQKLIKNPTIFEK 170 (376)
T ss_dssp --------------HHHHHHHHHHHHHHTCCCEEEEEBCSS------CCSSSBCHHH-HHHHHHCCTHHHH
T ss_pred --------------HHHHHHHHHHHHHcCCCeEEEEEECCC------CCcccCCHHH-HHHHHHHHHhCCC
Confidence 1134445566666654 566778998 5789966654 2333343333333
No 438
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=40.08 E-value=1.2e+02 Score=31.87 Aligned_cols=206 Identities=14% Similarity=0.177 Sum_probs=116.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHhhccCCcCccee----eccCC--CHHHHHHHhh-h
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLV----ADIHF--APSVALRVAE-C 181 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~------~A~al~~I~~~L~~~g~~iPLV----ADIHF--~~~~Al~a~~-~ 181 (706)
--.+..+++..++++||+-||=+-+-+.+ +.+.+.++.+.+|+. +++-|- +...| ++.-=++++. .
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~-~d~iI~~TTgg~~~~~~~~eeR~~~~~~~ 107 (314)
T 3lot_A 29 VTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SDVVINVTTGGGGTLGIPVEERAKVVPAL 107 (314)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH-CCCEEEECSSTTGGGTCCHHHHTTHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhc-CCeEEEeCCCCcCCCCCCHHHHHHHHHhc
Confidence 34588899999999999999999998853 555666666666653 443221 23444 4432222221 1
Q ss_pred -cCceeeCCC--CCCcc--hhhccccccchH-HHHHHH-hhH----HhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHh
Q 005248 182 -FDKIRVNPG--NFADR--RAQFEQLEYTDD-EYQKEL-QHI----EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSY 250 (706)
Q Consensus 182 -~~kiRINPG--Nig~~--~k~F~~~~Ytde-eY~~El-~~I----~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~r 250 (706)
-|-.=+|.| ||+.. .++|+...|+.| +|.+.- +.+ .+.+..+.+.++++|+..=|-+ .+
T Consensus 108 ~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~N~~~~i~~~~~~~~e~Gi~pE~e~----fd------ 177 (314)
T 3lot_A 108 KPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKENDTKPELEC----YD------ 177 (314)
T ss_dssp CCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTCEEEEEE----CS------
T ss_pred CCceeeecCCCcccccccccccccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCEEEEEE----EC------
Confidence 344458898 66521 122444444422 244332 112 3457778999999999888776 21
Q ss_pred hCCChHHHHHHHHHHHHHHHHCCC------CcEEEEEecC---ChhHHHHHHHHHHHhhhc-CCCCCcccccccccCCCC
Q 005248 251 YGDSPRGMVESAFEFARICRKLDF------HNFLFSMKAS---NPVVMVQAYRLLVAEMYV-HGWDYPLHLGVTEAGEGE 320 (706)
Q Consensus 251 ygdt~eamVeSAle~~~i~e~~~f------~~iviS~KaS---nv~~~i~ayrlla~~~~~-eg~~YPLHLGVTEAG~g~ 320 (706)
-++++.+. .+.+.|. -++|+-++.. ++..+. .+...+.++-. . + .++.|+=+|-..
T Consensus 178 -----~g~l~~~~----~l~~~Gll~~p~~~~~VlGv~~G~~~~p~~L~-~~~~~~~~l~~~~--~--~~Wsv~g~Gr~q 243 (314)
T 3lot_A 178 -----IGQIYNTA----FMFHEGYLEPPLRLQFIHGILGGIGTAVEDVL-FMKQTADRLIGRE--N--YTWSLVGAGRFQ 243 (314)
T ss_dssp -----HHHHHHHH----HHHHTTCSCSSEEEEEEECCBTSCCCCHHHHH-HHHHHHHHHTCGG--G--EEEEEEECGGGH
T ss_pred -----HHHHHHHH----HHHHCCCCCCCceEEEEecCCCCCCCCHHHHH-HHHHHhhhccCCC--C--CeEEEEecChhh
Confidence 25555544 3445565 4566666533 555433 33222222211 1 2 366666666555
Q ss_pred CCchhhHHHHHHHhhcCCCceeEEe
Q 005248 321 DGRMKSAIGIGTLLQDGLGDTIRVS 345 (706)
Q Consensus 321 ~G~IKSavGiG~LL~dGIGDTIRVS 345 (706)
--...-|+.+|-=+-=|+.|++..+
T Consensus 244 ~p~~~~A~~~GGhvRVGlEDnl~~~ 268 (314)
T 3lot_A 244 MPLGTLAVIMGGDVRVGLEDSLYIE 268 (314)
T ss_dssp HHHHHHHHHTTCEEEESTTTCSEEE
T ss_pred HHHHHHHHHcCCceEEccCcccccC
Confidence 5555566666655666777777776
No 439
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=39.94 E-value=68 Score=31.21 Aligned_cols=68 Identities=13% Similarity=0.088 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHhhh-cCceeeCCCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~~------~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~~~-~~kiRINPGN 191 (706)
.++.++++.++|++.+-++-++.. ..+.+++|++. +++|+++.--++ +.-+..+.+. ++++=+.-.-
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~-----~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~ 106 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-----TTLPIIASGGAGKMEHFLEAFLAGADKALAASVF 106 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGG-----CCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHh-----cCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHH
Confidence 567788899999999999865532 25667777763 789999876555 3334455554 7877665444
Q ss_pred C
Q 005248 192 F 192 (706)
Q Consensus 192 i 192 (706)
+
T Consensus 107 ~ 107 (266)
T 2w6r_A 107 H 107 (266)
T ss_dssp -
T ss_pred H
Confidence 4
No 440
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=39.77 E-value=34 Score=36.26 Aligned_cols=66 Identities=20% Similarity=0.300 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHHHHhhhcCce
Q 005248 117 VAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (706)
Q Consensus 117 v~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al~a~~~~~ki 185 (706)
.+..++++.++.+.|...+.+-+- -.++.+.++.||+.+ |-++||..|.| |++.-|+..++.+++.
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~~~~~d~~~v~avR~a~---g~~~~l~vDaN~~~~~~~A~~~~~~L~~~ 225 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGFDDARDVRNALHVRELL---GAATPLMADANQGWDLPRARQMAQRLGPA 225 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSSCHHHHHHHHHHHHHHH---CSSSCEEEECTTCCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCHHHHHHHHHHHHHhc---CCCceEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 466788889999999999999875 356677777777753 56799999988 5555555555656654
No 441
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=39.32 E-value=70 Score=33.30 Aligned_cols=213 Identities=12% Similarity=0.117 Sum_probs=126.9
Q ss_pred eEEEceeecCCCCceEEEeccCCCCC-C---HHHHHHHHHHHHHcCCCEEEEe----------------cCCHHHHHHHH
Q 005248 90 TVMVGNVAIGSEHPIRVQTMTTNDTK-D---VAGTVEEVMRIADQGADLVRIT----------------VQGKREADACF 149 (706)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~-D---v~atv~Qi~~L~~aGceiVRvt----------------v~~~~~A~al~ 149 (706)
.+++|++.+ -|-|+.-.||+.... | .+..++--.+.++-|+-+|=.- .-+.+..+.++
T Consensus 7 p~~ig~~~l--~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~ 84 (349)
T 3hgj_A 7 PLELGGLRL--KNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLK 84 (349)
T ss_dssp CEEETTEEE--SSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHH
T ss_pred CeeECCEEe--cCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHHH
Confidence 477788877 688999999865432 2 5666666677787777666321 12457788999
Q ss_pred HHHHhhccCCcCcceeeccCCCHHHHHHHhhhc-----CceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHH
Q 005248 150 EIKNSLVQKNYNIPLVADIHFAPSVALRVAECF-----DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLV 224 (706)
Q Consensus 150 ~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~-----~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv 224 (706)
+|.+...+.|..+ ++=++--.+.+....... ..--+-|-.+......-...+.| .+|+++|-+.|..-.
T Consensus 85 ~~~~~vh~~G~~i--~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt----~~eI~~ii~~f~~aA 158 (349)
T 3hgj_A 85 ELARRIREAGAVP--GIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLD----EAGMERILQAFVEGA 158 (349)
T ss_dssp HHHHHHHHTTCEE--EEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECC----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCeE--EEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCC----HHHHHHHHHHHHHHH
Confidence 9999998888753 444443344331100000 00012233322111001223444 457888999999999
Q ss_pred HHHHHcCC-eEEEecCCCCCchhHHH--------hhCCChHHHHHHHHHHHHHHHH-CCCCcEEEEEecCCh-----hHH
Q 005248 225 EKCKKYGR-AVRIGTNHGSLSDRIMS--------YYGDSPRGMVESAFEFARICRK-LDFHNFLFSMKASNP-----VVM 289 (706)
Q Consensus 225 ~~ake~~~-~IRIGvN~GSL~~~il~--------rygdt~eamVeSAle~~~i~e~-~~f~~iviS~KaSnv-----~~~ 289 (706)
+.|++.|. .|-|=.-||-|-+.+++ +||.+.+.=..-++|-++-.++ .| .++.|++|-|-. -..
T Consensus 159 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG-~d~pV~vRls~~~~~~~g~~ 237 (349)
T 3hgj_A 159 RRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVP-RELPLFVRVSATDWGEGGWS 237 (349)
T ss_dssp HHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSC-TTSCEEEEEESCCCSTTSCC
T ss_pred HHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhc-CCceEEEEeccccccCCCCC
Confidence 99999885 46676678877555554 4776666555566666665544 44 456677887721 011
Q ss_pred HHHHHHHHHhhhcCCCCCccccc
Q 005248 290 VQAYRLLVAEMYVHGWDYPLHLG 312 (706)
Q Consensus 290 i~ayrlla~~~~~eg~~YPLHLG 312 (706)
.+-+..+++++++.|.|| ||+.
T Consensus 238 ~~~~~~la~~L~~~Gvd~-i~vs 259 (349)
T 3hgj_A 238 LEDTLAFARRLKELGVDL-LDCS 259 (349)
T ss_dssp HHHHHHHHHHHHHTTCCE-EEEE
T ss_pred HHHHHHHHHHHHHcCCCE-EEEe
Confidence 233456777777788887 6653
No 442
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=39.29 E-value=50 Score=35.42 Aligned_cols=67 Identities=15% Similarity=0.132 Sum_probs=45.4
Q ss_pred HHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHH
Q 005248 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSP 222 (706)
Q Consensus 145 A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~ 222 (706)
-+.+..+++++ +.++||++|=++ +..-+..+++. ++-|.|.|..+|.-. ...+
T Consensus 262 ~~~~~~l~~~~---~~~ipIa~dE~~~~~~~~~~~i~~~~d~i~ik~~~~GGit----------------------ea~~ 316 (415)
T 2p3z_A 262 YEGYRELKRNA---PAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGWCGGLT----------------------TLVE 316 (415)
T ss_dssp HHHHHHHHHHS---CTTCEEEECTTCCSHHHHHHHHHTTCSEECCCHHHHTCHH----------------------HHHH
T ss_pred HHHHHHHHHhc---CCCCcEEcCCCCCCHHHHHHHHHcCCCEEEeCccccCCHH----------------------HHHH
Confidence 44455555541 123899999665 44444444443 888999998888733 4577
Q ss_pred HHHHHHHcCCeEEE
Q 005248 223 LVEKCKKYGRAVRI 236 (706)
Q Consensus 223 vv~~ake~~~~IRI 236 (706)
+++.|+++|+++=+
T Consensus 317 ia~lA~~~gi~v~~ 330 (415)
T 2p3z_A 317 IAALAKSRGQLVVP 330 (415)
T ss_dssp HHHHHHHTTCCBCC
T ss_pred HHHHHHHcCCEEEe
Confidence 99999999998754
No 443
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=39.23 E-value=40 Score=37.01 Aligned_cols=65 Identities=20% Similarity=0.348 Sum_probs=42.6
Q ss_pred HHHHHHHHHHcCCCEEEEe------cCC-------HHHHHHHHHHHHhhccCCcCcceeec--cCCCHHHHHHHhhh-cC
Q 005248 120 TVEEVMRIADQGADLVRIT------VQG-------KREADACFEIKNSLVQKNYNIPLVAD--IHFAPSVALRVAEC-FD 183 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvt------v~~-------~~~A~al~~I~~~L~~~g~~iPLVAD--IHF~~~~Al~a~~~-~~ 183 (706)
|.+++++|+++|+|.|.+. +.+ .....++.++.+.+++ +.+|+||| |.....++ +|+.. ++
T Consensus 282 t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~--~~iPVIa~GGI~~~~di~-kala~GAd 358 (496)
T 4fxs_A 282 TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE--YGIPVIADGGIRFSGDIS-KAIAAGAS 358 (496)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGG--GTCCEEEESCCCSHHHHH-HHHHTTCS
T ss_pred cHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhcc--CCCeEEEeCCCCCHHHHH-HHHHcCCC
Confidence 4577889999999999984 111 2245677777775543 56999997 65544443 44443 66
Q ss_pred ceee
Q 005248 184 KIRV 187 (706)
Q Consensus 184 kiRI 187 (706)
.|=|
T Consensus 359 ~V~i 362 (496)
T 4fxs_A 359 CVMV 362 (496)
T ss_dssp EEEE
T ss_pred eEEe
Confidence 6654
No 444
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=39.16 E-value=1.8e+02 Score=30.58 Aligned_cols=57 Identities=11% Similarity=0.011 Sum_probs=28.7
Q ss_pred HHHHHHHHHHc-CCeEE-EecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 220 FSPLVEKCKKY-GRAVR-IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 220 f~~vv~~ake~-~~~IR-IGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~ 281 (706)
+.++++.+++. ++.++ |-+.-||-..+. +.| ..-++...+.++.+++.|+.-=.+|+
T Consensus 189 ~~~~~~~~~~~~~l~l~Gl~~H~gs~~~~~-~~~----~~~~~~~~~~~~~l~~~g~~~~~l~~ 247 (434)
T 1twi_A 189 AMKAIKMALEMEYVNVVGVHCHIGSQLTDI-SPF----IEETRKVMDFVVELKEEGIEIEDVNL 247 (434)
T ss_dssp HHHHHHHHHHCSSEEEEEEECCCCSSBCCS-HHH----HHHHHHHHHHHHHHHHTTCCCSEEEC
T ss_pred HHHHHHHHHhCCCCCEEEEEEECCCCCCCH-HHH----HHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 56678888876 55432 333347754211 001 22345555566666666664223443
No 445
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=39.05 E-value=27 Score=36.59 Aligned_cols=62 Identities=10% Similarity=0.076 Sum_probs=44.0
Q ss_pred CcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 159 NYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 159 g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
.+++|+.+|=+. +..-+...++ +++-+.+.|+..|.-. ....+.+.|+.+|+++=
T Consensus 242 ~~~~pia~dE~~~~~~~~~~~~~~~~~d~v~~d~~~~GGit----------------------~~~~ia~~a~~~gi~~~ 299 (376)
T 4h2h_A 242 LCHHALYMDEDGTSLNTVITAAATSLVDGFGMKVSRIGGLQ----------------------HMRAFRDFCAARNLPHT 299 (376)
T ss_dssp GCCSCEEESTTCCSHHHHHHHHHTTCCSEECCBHHHHTSHH----------------------HHHHHHHHHHHHTCCEE
T ss_pred cccCccccCcccCCHHHHHHHHHhhccCccccccceeCCcH----------------------HHHHHHHHHHHcCCCEE
Confidence 378999999654 3444444444 4888888888887632 46778999999999987
Q ss_pred EecCCCC
Q 005248 236 IGTNHGS 242 (706)
Q Consensus 236 IGvN~GS 242 (706)
+|-.+||
T Consensus 300 ~~~~~~~ 306 (376)
T 4h2h_A 300 CDDAWGG 306 (376)
T ss_dssp CBCSSCS
T ss_pred eCCCCcc
Confidence 7655543
No 446
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=38.95 E-value=2e+02 Score=27.63 Aligned_cols=103 Identities=17% Similarity=0.149 Sum_probs=63.2
Q ss_pred HHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEec------CCCCCchhHHH
Q 005248 177 RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT------NHGSLSDRIMS 249 (706)
Q Consensus 177 ~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGv------N~GSL~~~il~ 249 (706)
.+++. ++.|=|.+.++.+.. .+.+.++-+.++++|+.+-... |.+|.++..
T Consensus 25 ~~~~~G~~~vEl~~~~~~~~~--------------------~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~-- 82 (294)
T 3vni_A 25 KVAKLGFDILEIAASPLPFYS--------------------DIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDI-- 82 (294)
T ss_dssp HHHHHTCSEEEEESTTGGGCC--------------------HHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHH--
T ss_pred HHHHcCCCEEEecCcccCCcC--------------------HHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHH--
Confidence 33444 888888887652211 2356678889999999885421 222222221
Q ss_pred hhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEec------C---C----hhHHHHHHHHHHHhhhcCCCC
Q 005248 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKA------S---N----PVVMVQAYRLLVAEMYVHGWD 306 (706)
Q Consensus 250 rygdt~eamVeSAle~~~i~e~~~f~~iviS~Ka------S---n----v~~~i~ayrlla~~~~~eg~~ 306 (706)
-+..++...+.+++|.++|-..+++.+=+ + + ...+++..+.+++...+.|..
T Consensus 83 -----r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~ 147 (294)
T 3vni_A 83 -----RKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVD 147 (294)
T ss_dssp -----HHHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred -----HHHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 13567788889999999999988743211 1 1 244566677777766555544
No 447
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=38.58 E-value=44 Score=34.45 Aligned_cols=60 Identities=15% Similarity=0.139 Sum_probs=45.5
Q ss_pred CCcCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeE
Q 005248 158 KNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (706)
Q Consensus 158 ~g~~iPLVADIHF-~~~~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~I 234 (706)
+.+++|+.+|=.. +..-+...++ +++-|.|.|...|.-. ...++.+.|+++|+++
T Consensus 211 ~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~k~~~~GGit----------------------~~~~ia~~A~~~gi~~ 268 (342)
T 2okt_A 211 DGTIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGID----------------------KVQTAIDTLKSHGAKV 268 (342)
T ss_dssp TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEECHHHHTSGG----------------------GHHHHHHHHHHTTCEE
T ss_pred hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEEChhhcCCHH----------------------HHHHHHHHHHHCCCEE
Confidence 4568999999664 4444444443 5999999999998743 5678999999999999
Q ss_pred EEecC
Q 005248 235 RIGTN 239 (706)
Q Consensus 235 RIGvN 239 (706)
=+|..
T Consensus 269 ~~~~~ 273 (342)
T 2okt_A 269 VIGGM 273 (342)
T ss_dssp EEBCS
T ss_pred EEcCC
Confidence 77753
No 448
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=37.71 E-value=47 Score=34.37 Aligned_cols=90 Identities=17% Similarity=0.224 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHh--hhcCceeeCCCCCC
Q 005248 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVA--ECFDKIRVNPGNFA 193 (706)
Q Consensus 117 v~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~--~~~~kiRINPGNig 193 (706)
.+..++-+++|++.|.+.+===+++ -+.+..++++ +++||.+|=... ..-+...+ .+++-|.|.|...|
T Consensus 137 ~~~A~~~~~~L~~~~l~~iEqP~~~---~~~~~~l~~~-----~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~ik~~~~G 208 (327)
T 2opj_A 137 VDTAVRMIRLLDRFELEYVEQPCAT---VDELAEVRRR-----VSVPIAADESIRRAEDPLRVRDAEAADVVVLKVQPLG 208 (327)
T ss_dssp HHHHHHHHHHHGGGCEEEEECCSSS---HHHHHHHHHH-----CSSCEEC-----------CTTTTTCCSBEEECHHHHT
T ss_pred HHHHHHHHHHHHhcCCcEEeCCCCC---HHHHHHHHhh-----CCCCEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccC
Confidence 4444555555555543333222332 3456666664 789999996543 22233333 34888999999988
Q ss_pred cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecC
Q 005248 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 194 ~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN 239 (706)
.- .+..+.|+.+|+++=+|..
T Consensus 209 Gi-------------------------t~~~~ia~~~gi~~~~~~~ 229 (327)
T 2opj_A 209 GV-------------------------RAALRLAEECGLPVVVSSA 229 (327)
T ss_dssp SH-------------------------HHHHHHHHHTCSCEEEBCC
T ss_pred CH-------------------------HHHHHHHHHcCCcEEEcCC
Confidence 72 2344567778998866653
No 449
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=37.40 E-value=87 Score=32.94 Aligned_cols=76 Identities=8% Similarity=0.125 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCH-----HHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh--cCceeeC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGK-----READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC--FDKIRVN 188 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~-----~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~--~~kiRIN 188 (706)
+.+.+++-+++|+++|+++|=+...+. ...+.+..||+. +++|+++=--+++..|.++++. +|-|=+-
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~-----~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRER-----FHGVIIGAGAYTAEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-----CCSEEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHH-----CCCCEEEECCcCHHHHHHHHHCCCccEEEEC
Confidence 566677788999999999999876321 123456778875 6789988666699999988874 7777665
Q ss_pred CCCCCcch
Q 005248 189 PGNFADRR 196 (706)
Q Consensus 189 PGNig~~~ 196 (706)
=+.+++++
T Consensus 324 R~~l~~P~ 331 (364)
T 1vyr_A 324 RDYIANPD 331 (364)
T ss_dssp HHHHHCTT
T ss_pred HHHHhChh
Confidence 45555443
No 450
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=37.37 E-value=1.3e+02 Score=32.29 Aligned_cols=95 Identities=12% Similarity=0.042 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCH-HHHHHHhh--hcCceeeCCCCC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAP-SVALRVAE--CFDKIRVNPGNF 192 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~-~~Al~a~~--~~~kiRINPGNi 192 (706)
|.+.+++-+++|++.|.+.+===++ .++-+.+.++++++ .++||+.+|=++.- .-+...++ +++-|++.|...
T Consensus 222 ~~~~A~~~~~~Le~~~l~~iEeP~~-~~d~~~~a~l~~~~---~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~d~~~~ 297 (404)
T 3ekg_A 222 DLNYATRLARGAREYGLKWIEEALP-PDDYWGYAELRRNA---PTGMMVTTGEHEATRWGFRMLLEMGCCDIIQPDVGWC 297 (404)
T ss_dssp CHHHHHHHHHHHGGGTCCEEECCSC-TTCHHHHHHHHHHS---CTTCEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTT
T ss_pred CHHHHHHHHHHHhhcCCcEEecCCC-cccHHHHHHHHHhc---CCCeEEEecCccCCHHHHHHHHHcCCCCeEecChhhc
Confidence 4555555566666666555433232 13456677777752 23445888976543 32333433 599999999999
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
|.-. ....+...|+++|+++=+
T Consensus 298 GGit----------------------ea~kia~lA~a~gv~v~~ 319 (404)
T 3ekg_A 298 GGVT----------------------ELLKISALADAHNALVVP 319 (404)
T ss_dssp THHH----------------------HHHHHHHHHHHTTCEECC
T ss_pred CCcc----------------------HHHHHHHHHHHcCCEEEe
Confidence 8733 567799999999999843
No 451
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=37.35 E-value=70 Score=33.10 Aligned_cols=61 Identities=18% Similarity=0.108 Sum_probs=44.4
Q ss_pred CceEEEeccCCC--CCCHHHHHHHHHHHHHcCCCEEEEec--CCHHHHHHHHHHHHhhccCCcCcceeecc
Q 005248 102 HPIRVQTMTTND--TKDVAGTVEEVMRIADQGADLVRITV--QGKREADACFEIKNSLVQKNYNIPLVADI 168 (706)
Q Consensus 102 ~PI~VQSMt~t~--T~Dv~atv~Qi~~L~~aGceiVRvtv--~~~~~A~al~~I~~~L~~~g~~iPLVADI 168 (706)
-+.+||-=|... ....+.+++..+.+++|||+.|=+-. |+.+++ ++|.+.+. -++|+++-.
T Consensus 148 ~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~---~~i~~~~~---~~vP~i~n~ 212 (290)
T 2hjp_A 148 RDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQKTPDEI---LAFVKSWP---GKVPLVLVP 212 (290)
T ss_dssp TTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCCSSSHHH---HHHHHHCC---CSSCEEECG
T ss_pred CCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHH---HHHHHHcC---CCCCEEEec
Confidence 357777766543 34689999999999999999998854 665665 56666532 249999864
No 452
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=37.34 E-value=63 Score=34.99 Aligned_cols=68 Identities=12% Similarity=0.244 Sum_probs=47.9
Q ss_pred HHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHhh--hcCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHH
Q 005248 145 ADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFS 221 (706)
Q Consensus 145 A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~~--~~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~ 221 (706)
-+.+.++++ .+++||.+|=+.. ..-+..+++ ++|-+.+.|...|.-. ...
T Consensus 270 ~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGit----------------------ea~ 322 (441)
T 3vc5_A 270 IDGMARVAA-----EVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLV----------------------RSA 322 (441)
T ss_dssp HHHHHHHHT-----TSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHH----------------------HHH
T ss_pred HHHHHHHHh-----cCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHH----------------------HHH
Confidence 345556665 3789999996543 343434443 5888999999998733 457
Q ss_pred HHHHHHHHcCCeEEEecC
Q 005248 222 PLVEKCKKYGRAVRIGTN 239 (706)
Q Consensus 222 ~vv~~ake~~~~IRIGvN 239 (706)
.+...|+++|+++=++.+
T Consensus 323 kia~lA~~~gv~v~~h~~ 340 (441)
T 3vc5_A 323 HIATLCATFGIELSMHSN 340 (441)
T ss_dssp HHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHcCCEEEecCC
Confidence 799999999998766543
No 453
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=37.30 E-value=1.8e+02 Score=31.25 Aligned_cols=65 Identities=25% Similarity=0.405 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHcCCCEEEEecC---CHHHHHHHHHHHHhhccCCc-CcceeeccCCCHHHHHHHhhh-cCceeeC
Q 005248 119 GTVEEVMRIADQGADLVRITVQ---GKREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAEC-FDKIRVN 188 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRvtv~---~~~~A~al~~I~~~L~~~g~-~iPLVADIHF~~~~Al~a~~~-~~kiRIN 188 (706)
...+++.+|.++|++.|=+.+. .....+.++.|++. + ++|+++--=.++..|..+.++ +|-|-+.
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~-----~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD-----YPDLPVVAGNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-----CTTSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH-----CCCceEEeCCcCCHHHHHHHHHcCCCEEEEc
Confidence 3467999999999999888543 23466778888885 4 588765433557778777776 9999983
No 454
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=37.29 E-value=1.4e+02 Score=29.30 Aligned_cols=137 Identities=20% Similarity=0.231 Sum_probs=69.3
Q ss_pred HHHHHHHHHHcCCCEE--EEecCCHHHH---HHHHHHHHhhccCCcCcceeecc-----C----CCHHH----HHHHhhh
Q 005248 120 TVEEVMRIADQGADLV--RITVQGKREA---DACFEIKNSLVQKNYNIPLVADI-----H----FAPSV----ALRVAEC 181 (706)
Q Consensus 120 tv~Qi~~L~~aGceiV--Rvtv~~~~~A---~al~~I~~~L~~~g~~iPLVADI-----H----F~~~~----Al~a~~~ 181 (706)
.++|+.+..++|++.| .+...+.... +.++++++..++ +.+|++.-+ | ++++. +..|.+.
T Consensus 101 ~~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~--~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~ 178 (273)
T 2qjg_A 101 IVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEY--WGMPLIAMMYPRGKHIQNERDPELVAHAARLGAEL 178 (273)
T ss_dssp ECSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHH--HTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHH--cCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHc
Confidence 3678888999999988 5433333222 233334433332 456766533 3 33322 2444444
Q ss_pred -cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHH
Q 005248 182 -FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVE 260 (706)
Q Consensus 182 -~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVe 260 (706)
+|-|=++|+ .+ + +.++++. +..++|+ =+..|.=.+ ++ +
T Consensus 179 Gad~i~~~~~--~~----~------------------~~l~~i~---~~~~ipv--va~GGi~~~--------~~----~ 217 (273)
T 2qjg_A 179 GADIVKTSYT--GD----I------------------DSFRDVV---KGCPAPV--VVAGGPKTN--------TD----E 217 (273)
T ss_dssp TCSEEEECCC--SS----H------------------HHHHHHH---HHCSSCE--EEECCSCCS--------SH----H
T ss_pred CCCEEEECCC--CC----H------------------HHHHHHH---HhCCCCE--EEEeCCCCC--------CH----H
Confidence 776777752 11 0 1223333 3335665 223333211 11 3
Q ss_pred HHHHHHHHHHHCCCCcEEEE---EecCChhHHHHHHHHHHHh
Q 005248 261 SAFEFARICRKLDFHNFLFS---MKASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 261 SAle~~~i~e~~~f~~iviS---~KaSnv~~~i~ayrlla~~ 299 (706)
.+++.++-+.+.|.+-+.+. +++.|+..++++++....+
T Consensus 218 ~~~~~~~~~~~~Ga~gv~vg~~i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 218 EFLQMIKDAMEAGAAGVAVGRNIFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHHHHHHHHHHHTCSEEECCHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEeeHHhhCCCCHHHHHHHHHHHHhc
Confidence 34444555556677655543 5667777777776665544
No 455
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=36.94 E-value=87 Score=33.83 Aligned_cols=68 Identities=12% Similarity=0.115 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHHHHhhhcCce
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDKI 185 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~--~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al~a~~~~~ki 185 (706)
.+.+..+++++++.+.|...+.+-+-. .++.+.++.||+.+ |-+++|..|.|-. +.-|+..++.++.+
T Consensus 200 ~~~e~~~~~a~~~~~~Gf~~~KlKvG~~~~~d~~~v~avR~a~---G~~~~l~vDaN~~~~~~~A~~~~~~L~~~ 271 (441)
T 4a35_A 200 YSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMI---GPEKTLMMDANQRWDVPEAVEWMSKLAKF 271 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH---CTTSEEEEECTTCCCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHhhccc
Confidence 467889999999999999999998743 56777788888753 5679999999865 44555555556554
No 456
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=36.77 E-value=62 Score=34.91 Aligned_cols=66 Identities=23% Similarity=0.343 Sum_probs=44.2
Q ss_pred HHHHHHHHHHcCCCEEEEecC-------------CHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh-cCc
Q 005248 120 TVEEVMRIADQGADLVRITVQ-------------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDK 184 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~-------------~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-~~k 184 (706)
|.+++++|.++|++.|-++.- +.....++..+++.+. ++++|++||-=. ++.-+.+|+.. ++.
T Consensus 288 t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~--~~~ipvia~GGI~~~~di~kala~GAd~ 365 (494)
T 1vrd_A 288 TPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVAR--KYDVPIIADGGIRYSGDIVKALAAGAES 365 (494)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHH--TTTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHh--hcCCCEEEECCcCCHHHHHHHHHcCCCE
Confidence 355668899999999998431 1234667777776543 368999998665 56666666654 666
Q ss_pred eee
Q 005248 185 IRV 187 (706)
Q Consensus 185 iRI 187 (706)
|=+
T Consensus 366 V~i 368 (494)
T 1vrd_A 366 VMV 368 (494)
T ss_dssp EEE
T ss_pred EEE
Confidence 644
No 457
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A* 3uw6_A
Probab=36.42 E-value=1.3e+02 Score=31.51 Aligned_cols=101 Identities=17% Similarity=0.132 Sum_probs=54.5
Q ss_pred HHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCcchhhccccccc
Q 005248 126 RIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205 (706)
Q Consensus 126 ~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~~~kiRINPGNig~~~k~F~~~~Yt 205 (706)
.|.++||+ .+.|.+.+||..+. +.|++-|++-=-|+.+.-...++++ .+.++ +-+
T Consensus 53 ~l~~~G~~--~f~vas~~Ea~~lr-------~aG~~~~Il~~g~~~~~~~~~~~~~--~i~~~---vds----------- 107 (388)
T 1bd0_A 53 TALEAGAS--RLAVAFLDEALALR-------EKGIEAPILVLGASRPADAALAAQQ--RIALT---VFR----------- 107 (388)
T ss_dssp HHHHHTCC--EEEESSHHHHHHHH-------HTTCCSCEEECSCCCGGGHHHHHHT--TEEEE---ECC-----------
T ss_pred HHHHCCCC--EEEEeeHHHHHHHH-------hCCcCCCEEEECCCCHHHHHHHHHc--CCEEE---ECC-----------
Confidence 46688975 47888888887653 2367655542134444444444442 23322 211
Q ss_pred hHHHHHHHhhHHhhHHHHHHHHHHcCC--eEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHC
Q 005248 206 DDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272 (706)
Q Consensus 206 deeY~~El~~I~~~f~~vv~~ake~~~--~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~ 272 (706)
.+.++.+-+.| +.+. +|.|=+|.| |+|+|-.++ +.+.+.++.+.++
T Consensus 108 -----------~~~l~~l~~~a-~~~~~~~V~lkvdtG------m~R~G~~~~---~e~~~~~~~i~~~ 155 (388)
T 1bd0_A 108 -----------SDWLEEASALY-SGPFPIHFHLKMDTG------MGRLGVKDE---EETKRIVALIERH 155 (388)
T ss_dssp -----------HHHHHHHHHHC-CCSSCEEEEEEBCSS------SCSSSBCSH---HHHHHHHHHHHHS
T ss_pred -----------HHHHHHHHHHh-ccCCCeEEEEEEcCC------CCcCCCCCH---HHHHHHHHHHHhC
Confidence 01233344455 5554 577788988 478995542 2344555555553
No 458
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=36.35 E-value=1.3e+02 Score=31.52 Aligned_cols=112 Identities=18% Similarity=0.307 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHcCCCEEEEe---------------------------cCCHHH-----------HHHHHHHHHhhccCCc
Q 005248 119 GTVEEVMRIADQGADLVRIT---------------------------VQGKRE-----------ADACFEIKNSLVQKNY 160 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRvt---------------------------v~~~~~-----------A~al~~I~~~L~~~g~ 160 (706)
.++.+..|-+++|+++||.| .-+.++ -+.+++|++. .
T Consensus 123 ~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~-----~ 197 (291)
T 3o07_A 123 KDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEK-----G 197 (291)
T ss_dssp SSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHH-----T
T ss_pred CCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHc-----c
Confidence 35667777788899999987 102221 2345666654 5
Q ss_pred Cccee----eccCCCHHHHHHHhhh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEE
Q 005248 161 NIPLV----ADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (706)
Q Consensus 161 ~iPLV----ADIHF~~~~Al~a~~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IR 235 (706)
++|+| +||+ +|.-|..+++. +|.|=|.=|=+..++-. ..-..|.+.+++-++ -.-+.+..+..|-+|.
T Consensus 198 ~IPVV~IAnGGI~-TpedA~~~le~GaDGVmVGrAI~~s~DP~-----~~Akafv~Av~~~~~-~~~~~~~s~~l~~~m~ 270 (291)
T 3o07_A 198 KLPVVNFAAGGVA-TPADAALLMQLGCDGVFVGSGIFKSSNPV-----RLATAVVEATTHFDN-PSKLLEVSSDLGELMG 270 (291)
T ss_dssp SCSSCEEBCSSCC-SHHHHHHHHHTTCSCEEECGGGGGSSCHH-----HHHHHHHHHHHTTTC-HHHHHHHHSSCCCC--
T ss_pred CCCEEEecCCCCC-CHHHHHHHHHhCCCEEEEchHHhCCCCHH-----HHHHHHHHHHHhccC-HHHHHHHHhccccccc
Confidence 68886 4554 57777777775 99999988877643211 112345555555433 4567888888898885
Q ss_pred EecCCCCC
Q 005248 236 IGTNHGSL 243 (706)
Q Consensus 236 IGvN~GSL 243 (706)
|.|--+|
T Consensus 271 -g~~~~~~ 277 (291)
T 3o07_A 271 -GVSIESI 277 (291)
T ss_dssp --------
T ss_pred -Ccchhhh
Confidence 8888888
No 459
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=36.11 E-value=2.5e+02 Score=27.56 Aligned_cols=142 Identities=15% Similarity=0.170 Sum_probs=80.8
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcC--CCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC--HHH----HHHHh
Q 005248 108 TMTTNDTKDVAGTVEEVMRIADQG--ADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PSV----ALRVA 179 (706)
Q Consensus 108 SMt~t~T~Dv~atv~Qi~~L~~aG--ceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~----Al~a~ 179 (706)
|+-.-|..|.+..++-+ .++| ++.+-+-++=.. +.- +.+.+.|++. ..+++.|.||- |+- +..++
T Consensus 7 lilalD~~~l~~~~~~v---~~~~~~v~~~Kv~~d~~~-~~G-~~~v~~lr~~--~~~v~lD~kl~Dip~t~~~~~~~~~ 79 (246)
T 2yyu_A 7 FIVALDFPSKQEVERFL---RPFAGTPLFVKVGMELYY-QEG-PAIVAFLKEQ--GHAVFLDLKLHDIPNTVKQAMKGLA 79 (246)
T ss_dssp EEEECCCSSHHHHHHHH---GGGTTSCCEEEECHHHHH-HHT-HHHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHH
T ss_pred eEEEeCCCCHHHHHHHH---HHhcccccEEEeCHHHHH-HhC-HHHHHHHHHC--CCeEEEEeecccchHHHHHHHHHHH
Confidence 45566777777655444 3445 356444433221 111 1233334444 46788999997 443 22444
Q ss_pred hh-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHH---cCC--eEEEecCC-CCCchhHH-Hhh
Q 005248 180 EC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKK---YGR--AVRIGTNH-GSLSDRIM-SYY 251 (706)
Q Consensus 180 ~~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake---~~~--~IRIGvN~-GSL~~~il-~ry 251 (706)
++ +|-|=++|- .|. +-+.++++.+++ +|. +-=|+||- =|++..-+ +.+
T Consensus 80 ~~Gad~vTvH~~-~g~-----------------------~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~ 135 (246)
T 2yyu_A 80 RVGADLVNVHAA-GGR-----------------------RMMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEEL 135 (246)
T ss_dssp HTTCSEEEEEGG-GCH-----------------------HHHHHHHHHHHHHSCSSSCCCEEEEESSCTTCCHHHHHHTS
T ss_pred hcCCCEEEEECC-CCH-----------------------HHHHHHHHHHHhhcccCCcCCCEEEEEeCCCCCHHHHHHHh
Confidence 55 787877772 121 134578888888 773 43578884 45555666 777
Q ss_pred CCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 252 GDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 252 gdt~eamVeSAle~~~i~e~~~f~~iviS~ 281 (706)
|-+ ..+++..+...+...+.|+.-+|.|.
T Consensus 136 ~~~-~~~~d~Vl~ma~~~~~~G~~g~V~~~ 164 (246)
T 2yyu_A 136 WIS-RPLVETVAHYAALAKESGLDGVVCSA 164 (246)
T ss_dssp CCC-SCHHHHHHHHHHHHHHHTCCEEECCH
T ss_pred cCC-CCHHHHHHHHHHHHHHhCCCEEEeCH
Confidence 521 12345556666666788988877554
No 460
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=35.69 E-value=80 Score=30.36 Aligned_cols=90 Identities=13% Similarity=0.084 Sum_probs=54.5
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHhhh-cCceeeCCCC
Q 005248 120 TVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGN 191 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~~~------~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~~~-~~kiRINPGN 191 (706)
+.+.++++.++|++.+=+|.-+.. +-+.++++++. +++|+||-.-.. +.-+.++.+. ++.+=+-=+=
T Consensus 154 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~-----~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal 228 (252)
T 1ka9_F 154 AVEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEA-----VGVPVIASGGAGRMEHFLEAFQAGAEAALAASVF 228 (252)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHH-----CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHH-----cCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHH
Confidence 467778888899998877632211 25677777775 579999954333 3333334443 6655432111
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
+..+ ..+.+..+.+++.|+++|.
T Consensus 229 ~~~~----------------------~~~~~~~~~l~~~~~~~~~ 251 (252)
T 1ka9_F 229 HFGE----------------------IPIPKLKRYLAEKGVHVRL 251 (252)
T ss_dssp HTTS----------------------SCHHHHHHHHHHTTCCBCC
T ss_pred HcCC----------------------CCHHHHHHHHHHCCCCcCC
Confidence 1111 1356677888999999884
No 461
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=35.60 E-value=1.1e+02 Score=32.62 Aligned_cols=76 Identities=13% Similarity=0.063 Sum_probs=57.4
Q ss_pred HhhHHhhHHHHH--HHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCC--cEEEEEecCChhH
Q 005248 213 LQHIEEVFSPLV--EKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFH--NFLFSMKASNPVV 288 (706)
Q Consensus 213 l~~I~~~f~~vv--~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~--~iviS~KaSnv~~ 288 (706)
++..-++|.+.. +.|+- ..|-+|-.+..++..+.++||+.|.+.++++++.|.+ ||+|-+-++ ..
T Consensus 97 v~~a~D~l~v~~g~ei~~~---------v~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKIP~T--~e 165 (345)
T 3tkf_A 97 VKEIAIEILVSFGIKILDV---------IEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIMIAAT--WE 165 (345)
T ss_dssp HHHHHHHHHHHHHHHHHTT---------CSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECS--HH
T ss_pred HHHHHHHHHHHHHHHHhcC---------CCCCEEEEEcCCccCCHHHHHHHHHHHHHHhhhcCCCCCcEEEEeCCC--HH
Confidence 344455566555 44432 2577777777777788999999999999999999995 899888777 46
Q ss_pred HHHHHHHHHHh
Q 005248 289 MVQAYRLLVAE 299 (706)
Q Consensus 289 ~i~ayrlla~~ 299 (706)
=++|-+.|.++
T Consensus 166 Gi~A~~~L~~e 176 (345)
T 3tkf_A 166 GIKAAKLLQKE 176 (345)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 78888888765
No 462
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=35.49 E-value=18 Score=31.54 Aligned_cols=11 Identities=64% Similarity=1.434 Sum_probs=9.1
Q ss_pred ccCCCCccccc
Q 005248 644 SCPSCGRTLFD 654 (706)
Q Consensus 644 SCPsCGRTlfD 654 (706)
.||.||+++=+
T Consensus 49 ~CPvCgs~l~~ 59 (112)
T 1l8d_A 49 KCPVCGRELTD 59 (112)
T ss_dssp ECTTTCCEECH
T ss_pred CCCCCCCcCCH
Confidence 59999998654
No 463
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=35.35 E-value=73 Score=34.97 Aligned_cols=91 Identities=14% Similarity=0.058 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCc-CcceeeccCCCH-HHHHHHhh--hcCceeeCCCCCC
Q 005248 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNY-NIPLVADIHFAP-SVALRVAE--CFDKIRVNPGNFA 193 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~-~iPLVADIHF~~-~~Al~a~~--~~~kiRINPGNig 193 (706)
+.+++-+++|++.+.+.+==-++ .++.+.+.+++++ + .+||.+|=++.- .-+...++ ++|-|++.|...|
T Consensus 230 ~~Ai~~~~~Le~~~l~~iEEPl~-~dd~~~la~L~~~-----~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~d~~~~G 303 (455)
T 3fxg_A 230 SYTIELVKACLDLNINWWEECLS-PDDTDGFALIKRA-----HPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVMWLG 303 (455)
T ss_dssp HHHHHHHHHTGGGCCSEEECCSC-GGGGGGHHHHHHH-----CTTSEEEECTTCCHHHHHHHHHTTCCCSEECCCTTTSS
T ss_pred HHHHHHHHhcccCCcceecCCCC-cchHHHHHHHHHh-----CCCCeEECCCccCCHHHHHHHHHcCCCCEEEECccccC
Confidence 33344444444444433322121 2234455566554 4 489999977653 33334444 5999999999998
Q ss_pred cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 194 ~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
.-. ....+...|+++|+++=+
T Consensus 304 GIt----------------------ea~kIa~lA~a~Gv~v~~ 324 (455)
T 3fxg_A 304 GLT----------------------ELLKVAALAAAYDVPVVP 324 (455)
T ss_dssp CHH----------------------HHHHHHHHHHTTTCCBCC
T ss_pred CHH----------------------HHHHHHHHHHHcCCEEEe
Confidence 733 567799999999999843
No 464
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=35.18 E-value=34 Score=37.42 Aligned_cols=66 Identities=27% Similarity=0.390 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCEEEEecCC-------------HHHHHHHHHHHHhhccC----CcCcceeec--cCCCHHHHHHHhh
Q 005248 120 TVEEVMRIADQGADLVRITVQG-------------KREADACFEIKNSLVQK----NYNIPLVAD--IHFAPSVALRVAE 180 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv~~-------------~~~A~al~~I~~~L~~~----g~~iPLVAD--IHF~~~~Al~a~~ 180 (706)
+.++.++|+++|++.|.+..-. .-.+.++.++.+.+++. |..+|++|| |+.-..++.+=+-
T Consensus 294 t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlal 373 (503)
T 1me8_A 294 DGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAM 373 (503)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHc
Q ss_pred hcCce
Q 005248 181 CFDKI 185 (706)
Q Consensus 181 ~~~ki 185 (706)
.++.|
T Consensus 374 GA~~V 378 (503)
T 1me8_A 374 GADFI 378 (503)
T ss_dssp TCSEE
T ss_pred CCCEE
No 465
>3gwq_A D-serine deaminase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=35.10 E-value=2.2e+02 Score=30.33 Aligned_cols=104 Identities=18% Similarity=0.156 Sum_probs=57.4
Q ss_pred HHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhhcCceeeCCCC-C---Ccchhhc
Q 005248 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGN-F---ADRRAQF 199 (706)
Q Consensus 125 ~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~~~kiRINPGN-i---g~~~k~F 199 (706)
+.+.++|+. .++|.+..||+.+.+ .|++-++++ .|+ .+.-...+++.++ .||. + .|..
T Consensus 88 ~~l~~~G~~--g~~vas~~Ea~~l~~-------~Gi~~ill~-~~~~~~~~~~~~~~l~~----~~~~~l~~~Vds~--- 150 (426)
T 3gwq_A 88 RRQLETGAW--GITLATAHQVRAAYH-------GGVSRVLMA-NQLVGRRNMMMVAELLS----DPEFEFFCLVDSV--- 150 (426)
T ss_dssp HHHHHTTCC--CEEESSHHHHHHHHH-------TTCCEEEEC-SCCCSHHHHHHHHHHTT----CTTCEEEEEECCH---
T ss_pred HHHHHCCCC--eEEEeCHHHHHHHHH-------CCCCeEEEE-CCcCCHHHHHHHHHHhh----cCCccEEEEeCCH---
Confidence 456778965 578999999887643 366433444 333 3443333333332 1321 1 1211
Q ss_pred cccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE--ecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHC
Q 005248 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI--GTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272 (706)
Q Consensus 200 ~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI--GvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~ 272 (706)
+.++.+-+.|++.++++|| =||.| +.|.|-.+. +.+.+.++.+.++
T Consensus 151 ------------------~~l~~L~~~a~~~~~~~~V~l~VdtG------~~R~Gv~~~---~e~~~l~~~i~~~ 198 (426)
T 3gwq_A 151 ------------------EGVEQLGEFFKSVNKQLQVLLELGVP------GGRTGVRDA---AQRNAVLEAITRY 198 (426)
T ss_dssp ------------------HHHHHHHHHHHHTTCCEEEEEEECCT------TSSSSBCSH---HHHHHHHHHHHTS
T ss_pred ------------------HHHHHHHHHHHHCCCeeEEEEEeCCC------CCcCCCCCH---HHHHHHHHHHHcC
Confidence 2445566677777776654 57877 568885442 2345555555554
No 466
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=34.98 E-value=1.3e+02 Score=31.77 Aligned_cols=109 Identities=15% Similarity=0.114 Sum_probs=52.1
Q ss_pred HHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC-----HHHHHHHhhhcCce-eeCCCCCCcc
Q 005248 122 EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-----PSVALRVAECFDKI-RVNPGNFADR 195 (706)
Q Consensus 122 ~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~-----~~~Al~a~~~~~ki-RINPGNig~~ 195 (706)
+=++.|.++| ..+.|-+..||..+.+ .|++-|. |.|. +.-...|++. .+ +++=.|.
T Consensus 75 ~v~~~l~~~G---~g~~vas~~E~~~~~~-------~G~~~~~---iv~~g~~k~~~~l~~a~~~--gv~~~~vds~--- 136 (425)
T 1f3t_A 75 RVLGTLAALG---TGFDCASNTEIQRVRG-------IGVPPEK---IIYANPCKQISHIRYARDS--GVDVMTFDCV--- 136 (425)
T ss_dssp HHHHHHHHTT---CEEEECSHHHHHHHHH-------TTCCGGG---EEECCSSCCHHHHHHHHHT--TCCEEEECSH---
T ss_pred HHHHHHHHcC---CcEEEeCHHHHHHHHH-------cCCChhh---EEEcCCCCCHHHHHHHHHC--CCCEEEeCCH---
Confidence 3345667788 3888888888876643 3665443 3342 2222233332 12 1221111
Q ss_pred hhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCC
Q 005248 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDF 274 (706)
Q Consensus 196 ~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f 274 (706)
+||++|.+ .++...+.+||=+....-.-..++|+|-+++.+ .+.++.+.+.++
T Consensus 137 ---------------~el~~l~~-------~~~~~~v~lrid~g~~~~~~~~~~RfG~~~~~~----~~~~~~~~~~~l 189 (425)
T 1f3t_A 137 ---------------DELEKVAK-------THPKAKMVLRISTDDSLARCRLSVKFGAKVEDC----RFILEQAKKLNI 189 (425)
T ss_dssp ---------------HHHHHHHH-------HCTTCEEEEEBCC----------CCSCBCHHHH----HHHHHHHHHTTC
T ss_pred ---------------HHHHHHHH-------hCCCCcEEEEEcCCCCCccCCCCCcCCCCHHHH----HHHHHHHHhCCC
Confidence 23444433 344567888886652222335678888656432 344445555554
No 467
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=34.90 E-value=4.2e+02 Score=27.85 Aligned_cols=155 Identities=17% Similarity=0.234 Sum_probs=83.8
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHH-------
Q 005248 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS------- 173 (706)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~------- 173 (706)
+.||+|= |.+.+. +++..++|++||= .+...+.-+.++-+++ +.+|+|. .|....
T Consensus 105 ~vpISID------T~~~~V----a~aAl~aGa~iIN-DVsg~~~~~m~~v~a~------~g~~vVl-Mh~~G~P~tmq~~ 166 (314)
T 3tr9_A 105 PQLISVD------TSRPRV----MREAVNTGADMIN-DQRALQLDDALTTVSA------LKTPVCL-MHFPSETRKPGST 166 (314)
T ss_dssp CSEEEEE------CSCHHH----HHHHHHHTCCEEE-ETTTTCSTTHHHHHHH------HTCCEEE-ECCCCTTCCTTSS
T ss_pred CCeEEEe------CCCHHH----HHHHHHcCCCEEE-ECCCCCchHHHHHHHH------hCCeEEE-ECCCCCCcccccc
Confidence 4677764 444332 2333446999883 3333333345555555 6788886 676421
Q ss_pred ---------------HHHHHhhh-cC--ceeeCCCCCC---cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC
Q 005248 174 ---------------VALRVAEC-FD--KIRVNPGNFA---DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232 (706)
Q Consensus 174 ---------------~Al~a~~~-~~--kiRINPGNig---~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~ 232 (706)
....|.++ ++ +|=|-|| +| .++. -++..+=|+++++ -++.|.
T Consensus 167 ~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG-~G~~~F~Kt--------~~~n~~lL~~l~~--------l~~lg~ 229 (314)
T 3tr9_A 167 THFYFLQSVKKELQESIQRCKKAGISEDRIIIDPG-FGQGNYGKN--------VSENFYLLNKLPE--------FVAMGL 229 (314)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-CCSGGGCCC--------HHHHHHHHHTTHH--------HHTTSS
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeCC-CCchhhcCC--------HHHHHHHHHHHHH--------HhcCCC
Confidence 11133333 65 7889998 56 4331 1223333333332 256899
Q ss_pred eEEEecCCCCCchhHHHhhCCCh-HHHHHHHHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHHHHH
Q 005248 233 AVRIGTNHGSLSDRIMSYYGDSP-RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 298 (706)
Q Consensus 233 ~IRIGvN~GSL~~~il~rygdt~-eamVeSAle~~~i~e~~~f~~iviS~KaSnv~~~i~ayrlla~ 298 (706)
|+=+|+.-=|.=-.++ |..+ +.+-.++. ..-+|-..|-+= +-..||..+.+|.+...+
T Consensus 230 PvL~G~SRKsfig~~~---~~~~~~R~~~t~a-~~~~a~~~Ga~I----vRvHDV~e~~~a~~~~~a 288 (314)
T 3tr9_A 230 PVLSGWSRKSMIGDVL---NQPPENRLFGSIA-ADVLAVYHGASI----IRTHDVKATREAIKIATY 288 (314)
T ss_dssp CBEECCTTCHHHHHHH---TCCGGGCHHHHHH-HHHHHHHTTCSE----EEESCHHHHHHHHHHHHH
T ss_pred CEEEEechhhhhhhhc---CCChHHhHHHHHH-HHHHHHHcCCcE----EEeCChHHHHHHHHHHHH
Confidence 9999985433322222 3233 33333333 445666777643 346789888888876544
No 468
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=34.89 E-value=1.7e+02 Score=30.26 Aligned_cols=141 Identities=11% Similarity=0.100 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC-----CHHH-----HHHHHHHHHhhc-cC---Cc-CcceeeccCCCHHHHHHHhhh-
Q 005248 118 AGTVEEVMRIADQGADLVRITVQ-----GKRE-----ADACFEIKNSLV-QK---NY-NIPLVADIHFAPSVALRVAEC- 181 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~-----~~~~-----A~al~~I~~~L~-~~---g~-~iPLVADIHF~~~~Al~a~~~- 181 (706)
+.+++-++...++|++.|-+.-+ +.+. ...+++|.+.++ +. |. .+|++-=..=+..+...-++.
T Consensus 197 ~~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~~~~l~~l~~~g 276 (367)
T 1r3s_A 197 DALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAG 276 (367)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTCGGGHHHHTTSS
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCcHHHHHHHHhcC
Confidence 44566677788999999998755 3332 234556666665 43 32 366643211122222222333
Q ss_pred cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcC--CeEEEecCCCCCchhHHHhhCCChHHHH
Q 005248 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG--RAVRIGTNHGSLSDRIMSYYGDSPRGMV 259 (706)
Q Consensus 182 ~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~--~~IRIGvN~GSL~~~il~rygdt~eamV 259 (706)
++. ||+..-.| +-++.+..| +++ +|-|+..++ || |++.+.
T Consensus 277 ~d~--i~~d~~~d----------------------------l~~a~~~~g~~~~l-----~Gnldp~~L--~g-t~e~i~ 318 (367)
T 1r3s_A 277 YEV--VGLDWTVA----------------------------PKKARECVGKTVTL-----QGNLDPCAL--YA-SEEEIG 318 (367)
T ss_dssp CSE--EECCTTSC----------------------------HHHHHHHHCSSSEE-----EEEECGGGG--GS-CHHHHH
T ss_pred CCE--EEeCCCCC----------------------------HHHHHHHcCCCeEE-----EeCCChHHh--cC-CHHHHH
Confidence 543 34432222 223333333 233 555777666 53 777777
Q ss_pred HHHHHHHHHHHHCCCCcEEEEE--------ecCChhHHHHHHHHHHHh
Q 005248 260 ESAFEFARICRKLDFHNFLFSM--------KASNPVVMVQAYRLLVAE 299 (706)
Q Consensus 260 eSAle~~~i~e~~~f~~iviS~--------KaSnv~~~i~ayrlla~~ 299 (706)
+.+.+-++.+.. ..++++. .--|+..|+++.+.+.++
T Consensus 319 ~~v~~~l~~~g~---~g~I~~~ghgi~~~~p~env~a~v~~v~~~~~~ 363 (367)
T 1r3s_A 319 QLVKQMLDDFGP---HRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRL 363 (367)
T ss_dssp HHHHHHHHHHCS---SSEEEEESSCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC---CCeeecCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 777777666533 3557764 334555566666655544
No 469
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=34.69 E-value=2.9e+02 Score=28.04 Aligned_cols=75 Identities=15% Similarity=0.200 Sum_probs=50.0
Q ss_pred CceEEEeccCCC--CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHh
Q 005248 102 HPIRVQTMTTND--TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA 179 (706)
Q Consensus 102 ~PI~VQSMt~t~--T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~ 179 (706)
.|+.|+-|.+.. ..+. .+++..+.++|+++|-+..... .+-++.+++ ..+|++.+++ ++..|..+.
T Consensus 68 ~p~~v~l~v~~~~~~~~~---~~~~~~~~~~g~d~V~~~~g~p--~~~~~~l~~------~gi~vi~~v~-t~~~a~~~~ 135 (328)
T 2gjl_A 68 RPFGVNLTLLPTQKPVPY---AEYRAAIIEAGIRVVETAGNDP--GEHIAEFRR------HGVKVIHKCT-AVRHALKAE 135 (328)
T ss_dssp SCCEEEEEECCCSSCCCH---HHHHHHHHHTTCCEEEEEESCC--HHHHHHHHH------TTCEEEEEES-SHHHHHHHH
T ss_pred CCeEEEEeccccccCccH---HHHHHHHHhcCCCEEEEcCCCc--HHHHHHHHH------cCCCEEeeCC-CHHHHHHHH
Confidence 456666666521 2232 4567778889999999987654 344555554 3588888875 567777777
Q ss_pred hh-cCceeeC
Q 005248 180 EC-FDKIRVN 188 (706)
Q Consensus 180 ~~-~~kiRIN 188 (706)
+. +|-|=+.
T Consensus 136 ~~GaD~i~v~ 145 (328)
T 2gjl_A 136 RLGVDAVSID 145 (328)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEE
Confidence 75 8888883
No 470
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=34.53 E-value=1.1e+02 Score=29.77 Aligned_cols=95 Identities=18% Similarity=0.116 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCEEEEecCCH------HHHHHHHHHHHhhccCCcCcceeeccCCC-HHHHHHHhhh-cCceeeCCCCC
Q 005248 121 VEEVMRIADQGADLVRITVQGK------READACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGNF 192 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~------~~A~al~~I~~~L~~~g~~iPLVADIHF~-~~~Al~a~~~-~~kiRINPGNi 192 (706)
.+.++++.++|++.|=+|.-+. -+-+.++++++. +++|+||-.=.. +.-+.++.+. ++.+=|-=.=+
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~-----~~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~ 233 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-----TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFH 233 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGG-----CCSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHH-----cCCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHH
Confidence 4556788899999998864221 124556666653 689999964433 3444444454 77666654444
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCch
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~ 245 (706)
..+. .+.++.+.++++|+++| .|.||+.
T Consensus 234 ~~~~----------------------~~~~~~~~l~~~g~~~~---~~~~~~~ 261 (266)
T 2w6r_A 234 FREI----------------------DMRELKEYLKKHGVNVR---LEGLLEH 261 (266)
T ss_dssp -----------------------------------------------------
T ss_pred cCCC----------------------CHHHHHHHHHHCCCccc---ccchhhh
Confidence 3321 34557777888999998 4666653
No 471
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=34.47 E-value=73 Score=33.09 Aligned_cols=152 Identities=12% Similarity=0.099 Sum_probs=90.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHH------hhhcCceeeCC
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV------AECFDKIRVNP 189 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a------~~~~~kiRINP 189 (706)
|+....+++.++.++|.-+-.|-+|-.+.++.+..+.+.|...+-++++++=| -.+...+.+ .+.++.++|-|
T Consensus 112 ~t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~I-ET~~gv~~~~eIa~a~~~v~~l~~G~ 190 (316)
T 3qll_A 112 DTRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGII-ESVRGLNAVESIAAATPKLAGLIFGA 190 (316)
T ss_dssp TSHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEE-CSHHHHHTHHHHHTSCTTEEEEEECH
T ss_pred CCchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEE-cCHHHHHHHHHHHhcCCCceEEEECH
Confidence 44566678888889986334566777777777777777766544456766644 233333211 12356677777
Q ss_pred CCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHHHHHHH
Q 005248 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARIC 269 (706)
Q Consensus 190 GNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle~~~i~ 269 (706)
..+...-+ . .-++ .++. .....++.+|+.+|++. |+.=++.+.+ ++++- +.++..
T Consensus 191 ~DL~~~lG---~-~~~~----~~l~---~ar~~iv~AaraaGi~~-id~v~~~~~D---------~~gl~----~e~~~~ 245 (316)
T 3qll_A 191 ADMAADIG---A-ASTW----EPLA---LARARLVSACAMNGIPA-IDAPFFDVHD---------VSGLQ----SETLRA 245 (316)
T ss_dssp HHHHHHHT---C-CSSH----HHHH---HHHHHHHHHHHHHTCCE-EECCCSCSSC---------HHHHH----HHHHHH
T ss_pred HHHHHHhC---C-CCCc----HHHH---HHHHHHHHHHHHcCCce-eeccccCcCC---------HHHHH----HHHHHH
Confidence 65532110 0 0112 2232 34557899999999999 8876766643 45554 466777
Q ss_pred HHCCCCcEEEEEecCChhHHHHHHH
Q 005248 270 RKLDFHNFLFSMKASNPVVMVQAYR 294 (706)
Q Consensus 270 e~~~f~~iviS~KaSnv~~~i~ayr 294 (706)
..+||+- +.++=-+-+...-++|+
T Consensus 246 r~lGf~G-k~~IHP~QI~~vn~~f~ 269 (316)
T 3qll_A 246 SDFGFSA-KAAIHPAQISTINTLFT 269 (316)
T ss_dssp HHHTCCE-EEESSGGGHHHHHHHTS
T ss_pred HHCCCCe-EEeeCHHHHHHHHHHhC
Confidence 8899972 44555555665555553
No 472
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=34.35 E-value=58 Score=35.90 Aligned_cols=66 Identities=17% Similarity=0.300 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCCCEEEEec-------------CCHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh-cCc
Q 005248 120 TVEEVMRIADQGADLVRITV-------------QGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDK 184 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRvtv-------------~~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-~~k 184 (706)
|.++.++++++|+|.|.+-. -+.....++.++.+.+++ +.+|+|||--. ++.=+.+|+.. ++.
T Consensus 307 t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~--~~iPVIa~GGI~~~~di~kala~GA~~ 384 (511)
T 3usb_A 307 TAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARK--HGIPVIADGGIKYSGDMVKALAAGAHV 384 (511)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHT--TTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred cHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHh--CCCcEEEeCCCCCHHHHHHHHHhCchh
Confidence 56677889999999998721 012234566666554333 57999998554 34444445543 666
Q ss_pred eee
Q 005248 185 IRV 187 (706)
Q Consensus 185 iRI 187 (706)
|=+
T Consensus 385 V~v 387 (511)
T 3usb_A 385 VML 387 (511)
T ss_dssp EEE
T ss_pred hee
Confidence 644
No 473
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=34.32 E-value=49 Score=34.23 Aligned_cols=62 Identities=19% Similarity=0.157 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHhhh-cCce
Q 005248 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKI 185 (706)
Q Consensus 121 v~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~~~-~~ki 185 (706)
.+|+.+..++|+|+||+-..+.+. ++++++.++...-++|++|---.++.-+.+-++. +|-|
T Consensus 207 lee~~~A~~aGaD~I~ld~~~~~~---l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aGaD~i 269 (299)
T 2jbm_A 207 LQEAVQAAEAGADLVLLDNFKPEE---LHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVI 269 (299)
T ss_dssp HHHHHHHHHTTCSEEEEESCCHHH---HHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTTCCEE
T ss_pred HHHHHHHHHcCCCEEEECCCCHHH---HHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCCCCEE
Confidence 467777778999999999888644 4455555544233488888766676666555554 5533
No 474
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=34.17 E-value=1.4e+02 Score=29.40 Aligned_cols=147 Identities=13% Similarity=0.198 Sum_probs=77.9
Q ss_pred CCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH-HHHHHHHHHHHhhccCCcCcceeeccC--CCHHHHH
Q 005248 100 SEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK-READACFEIKNSLVQKNYNIPLVADIH--FAPSVAL 176 (706)
Q Consensus 100 G~~PI~VQSMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~-~~A~al~~I~~~L~~~g~~iPLVADIH--F~~~~Al 176 (706)
-+.|+-|.=|.+++ + .-+..++++||++|=+-.-.. .-.+.+..||+ .|..+ .-.++ .....+.
T Consensus 63 ~~~~~dvhLmv~~p----~---~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~----~G~k~--gval~p~t~~e~l~ 129 (228)
T 3ovp_A 63 QDPFFDMHMMVSKP----E---QWVKPMAVAGANQYTFHLEATENPGALIKDIRE----NGMKV--GLAIKPGTSVEYLA 129 (228)
T ss_dssp SSSCEEEEEECSCG----G---GGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHH----TTCEE--EEEECTTSCGGGTG
T ss_pred CCCcEEEEEEeCCH----H---HHHHHHHHcCCCEEEEccCCchhHHHHHHHHHH----cCCCE--EEEEcCCCCHHHHH
Confidence 35688888886544 3 245677889999987764321 23345666665 36543 22343 2222222
Q ss_pred HHhhhcCce---eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCC
Q 005248 177 RVAECFDKI---RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253 (706)
Q Consensus 177 ~a~~~~~ki---RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygd 253 (706)
.-++.+|-| -+|||- |.. +|.+.. +++|+ ..|++.-.+.|.|-.| ++.
T Consensus 130 ~~l~~~D~Vl~msv~pGf-~Gq--~f~~~~---------l~ki~--------~lr~~~~~~~I~VdGG-I~~-------- 180 (228)
T 3ovp_A 130 PWANQIDMALVMTVEPGF-GGQ--KFMEDM---------MPKVH--------WLRTQFPSLDIEVDGG-VGP-------- 180 (228)
T ss_dssp GGGGGCSEEEEESSCTTT-CSC--CCCGGG---------HHHHH--------HHHHHCTTCEEEEESS-CST--------
T ss_pred HHhccCCeEEEeeecCCC-CCc--ccCHHH---------HHHHH--------HHHHhcCCCCEEEeCC-cCH--------
Confidence 222335555 459985 432 254222 22222 2223332345666433 322
Q ss_pred ChHHHHHHHHHHHHHHHHCCCCcEEEE---EecCChhHHHHHHHHHHH
Q 005248 254 SPRGMVESAFEFARICRKLDFHNFLFS---MKASNPVVMVQAYRLLVA 298 (706)
Q Consensus 254 t~eamVeSAle~~~i~e~~~f~~iviS---~KaSnv~~~i~ayrlla~ 298 (706)
+.++.|.+.|-+-+|+- .|+.|+...++..|...+
T Consensus 181 ----------~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~ 218 (228)
T 3ovp_A 181 ----------DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS 218 (228)
T ss_dssp ----------TTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 45555666776665553 477788777776665443
No 475
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=34.02 E-value=11 Score=36.96 Aligned_cols=124 Identities=13% Similarity=0.136 Sum_probs=70.8
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH-HHHHHHHHHHhhccCCcCcceeeccCCC--HHHHH----HHhh
Q 005248 108 TMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR-EADACFEIKNSLVQKNYNIPLVADIHFA--PSVAL----RVAE 180 (706)
Q Consensus 108 SMt~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~-~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al----~a~~ 180 (706)
-||..|..|.+.+.+=+.++.+. ..+-+-.+=.. -.+.++. |++. ..++++|.||. ++-.. .+++
T Consensus 12 ~~~~~D~~~~~~a~~i~~~~~~~--~~~Kvg~~l~~~G~~~v~~----l~~~--~~~v~lD~K~~DI~nT~~~~v~~~~~ 83 (213)
T 1vqt_A 12 HMTPVLSLDMEDPIRFIDENGSF--EVVKVGHNLAIHGKKIFDE----LAKR--NLKIILDLKFCDIPSTVERSIKSWDH 83 (213)
T ss_dssp CCEEEEECCSSSHHHHHHHHCCC--SEEEECHHHHTTCTHHHHH----HHTT--TCEEEEEEEECSCHHHHHHHHHHHCC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCC--CEEEECHHHHhhCHHHHHH----HHHC--CCCEEEEeecccCchHHHHHHHHHHH
Confidence 48888888888777777777544 33444322111 0122333 4443 57999999884 54333 4445
Q ss_pred h-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCC-CCchhHHHhhCCChHHH
Q 005248 181 C-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG-SLSDRIMSYYGDSPRGM 258 (706)
Q Consensus 181 ~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~G-SL~~~il~rygdt~eam 258 (706)
+ +|-+=++| +.|. + -++++++.++ +.-+||.-= |++.. ++
T Consensus 84 ~GaD~vTvh~-~~G~-~----------------------~l~~~~~~~~----~~~~~V~~lts~~~~-l~--------- 125 (213)
T 1vqt_A 84 PAIIGFTVHS-CAGY-E----------------------SVERALSATD----KHVFVVVKLTSMEGS-LE--------- 125 (213)
T ss_dssp TTEEEEEEEG-GGCH-H----------------------HHHHHHHHCS----SEEEEECCCTTSCCC-HH---------
T ss_pred CCCCEEEEec-cCCH-H----------------------HHHHHHHhcC----CCeEEEEEeCCCCHH-HH---------
Confidence 5 77777776 2332 1 3344555543 556676321 44433 32
Q ss_pred HHHHHHHHHHHHHCCCCcEEEE
Q 005248 259 VESAFEFARICRKLDFHNFLFS 280 (706)
Q Consensus 259 VeSAle~~~i~e~~~f~~iviS 280 (706)
+...+.+++ .+.|++ +|.|
T Consensus 126 -~~v~~~a~~-~e~G~d-vV~~ 144 (213)
T 1vqt_A 126 -DYMDRIEKL-NKLGCD-FVLP 144 (213)
T ss_dssp -HHHHHHHHH-HHHTCE-EECC
T ss_pred -HHHHHHHHH-hcCCCE-EEEc
Confidence 566677888 889998 6553
No 476
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=34.00 E-value=73 Score=33.96 Aligned_cols=22 Identities=23% Similarity=0.394 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHc-CC-eEEEecCC
Q 005248 219 VFSPLVEKCKKY-GR-AVRIGTNH 240 (706)
Q Consensus 219 ~f~~vv~~ake~-~~-~IRIGvN~ 240 (706)
.+..+++.+++. ++ .|||++|.
T Consensus 180 ~L~~il~~l~~~~~v~~i~i~Tng 203 (416)
T 2a5h_A 180 TLEYIIAKLREIPHVEIVRIGSRT 203 (416)
T ss_dssp HHHHHHHHHHTSTTCCEEEEECSH
T ss_pred HHHHHHHHHHhcCCccEEEEEecc
Confidence 467788888886 34 69999986
No 477
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=33.89 E-value=1.2e+02 Score=31.54 Aligned_cols=70 Identities=10% Similarity=0.200 Sum_probs=51.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHhhccCCcCcceeeccCC--CHHHHHHHhhhcCcee
Q 005248 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDKIR 186 (706)
Q Consensus 114 T~Dv~atv~Qi~~L~~aGceiVRvtv~--~~~~A~al~~I~~~L~~~g~~iPLVADIHF--~~~~Al~a~~~~~kiR 186 (706)
...++..++++.+..+.|...+.+-+- -.++.+.++.||+.+ |-+++|..|-|- ++.-|+..++.++++.
T Consensus 142 ~~~~~~~~~~~~~~~~~Gf~~~K~k~g~~~~~di~~v~avr~~~---g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~ 215 (378)
T 4hpn_A 142 VDRVSDNASEMAERRAEGFHACKIKIGFGVEEDLRVIAAVREAI---GPDMRLMIDANHGYTVTEAITLGDRAAGFG 215 (378)
T ss_dssp CCHHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH---TTTSEEEEECTTCCCHHHHHHHHHHHGGGC
T ss_pred chhHHHHHHHHHHHHHhccceecccccCChHHHHHHHHHHHHhc---CCcEEEEEecCcccCHHHHHHHHhhhhhcc
Confidence 344678889999999999999888763 346677888888763 567999999875 5566666666666553
No 478
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=33.84 E-value=56 Score=37.34 Aligned_cols=158 Identities=16% Similarity=0.187 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHH----HhhhcCceeeCCCCCC
Q 005248 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR----VAECFDKIRVNPGNFA 193 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~----a~~~~~kiRINPGNig 193 (706)
+.-.+-|+--.+.|.|+|=++ =.+.|+-+.++|+.|.+.|.+++++|=|-- .-|++ -++..|.|=|-||.+|
T Consensus 193 ekD~~dl~f~~~~~vD~Ia~S--FVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~--~eav~nldeIl~~sDGImVARGDLg 268 (606)
T 3t05_A 193 EKDAEDIRFGIKENVDFIAAS--FVRRPSDVLEIREILEEQKANISVFPKIEN--QEGIDNIEEILEVSDGLMVARGDMG 268 (606)
T ss_dssp HHHHHHHHHHHHTTCSEEEET--TCCSHHHHHHHHHHHHHTTCCCEEEECCCS--HHHHHTHHHHHHHCSCEEEEHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHHHHHhcCCCCeEEEEeCC--HHHHHhHHHHHHhCCEEEEcccccc
Confidence 344445556667899997666 334566666667777778889999999954 33332 2335889999999886
Q ss_pred cchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCCh-HHHHHHHHHHHHHHHHC
Q 005248 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP-RGMVESAFEFARICRKL 272 (706)
Q Consensus 194 ~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~-eamVeSAle~~~i~e~~ 272 (706)
-.-. .+++-.--+.++++|+++|+|+=+.+ -=|+.- -+. +.| .|=|. -+.-+--.
T Consensus 269 vei~---------------~e~vp~~Qk~ii~~~~~~gkpvi~AT--QMLeSM--i~~-p~PTRAEvs----DVanAv~d 324 (606)
T 3t05_A 269 VEIP---------------PEKVPMVQKDLIRQCNKLGKPVITAT--QMLDSM--QRN-PRATRAEAS----DVANAIYD 324 (606)
T ss_dssp HHSC---------------GGGHHHHHHHHHHHHHHHTCCEEEES--SSSGGG--TTC-SSCCHHHHH----HHHHHHHH
T ss_pred CcCC---------------HHHHHHHHHHHHHHHHHcCCCeEEeh--HHHHHh--hcC-CCccHHHHH----HHHHHHHc
Confidence 5221 12444444789999999999984444 223321 111 222 11111 11222235
Q ss_pred CCCcEEEE---EecCChhHHHHHHHHHHHhhhcC
Q 005248 273 DFHNFLFS---MKASNPVVMVQAYRLLVAEMYVH 303 (706)
Q Consensus 273 ~f~~iviS---~KaSnv~~~i~ayrlla~~~~~e 303 (706)
|.+-+-+| .+-.-|.+.|+.-..++.++|+.
T Consensus 325 GaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~ 358 (606)
T 3t05_A 325 GTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAA 358 (606)
T ss_dssp TCSEEEECHHHHSCSCSHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEecccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 88889998 47778888999988888887654
No 479
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=33.79 E-value=36 Score=35.48 Aligned_cols=59 Identities=15% Similarity=0.356 Sum_probs=40.8
Q ss_pred ceEEEeccCCC-CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeecc
Q 005248 103 PIRVQTMTTND-TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168 (706)
Q Consensus 103 PI~VQSMt~t~-T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADI 168 (706)
+..|+-=|.+- ..+++.+++..+..++||+|.|=+-.+ ++.+-++.+.+. +++||++.+
T Consensus 155 ~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~--~~~ee~~~~~~~-----~~~Pl~~n~ 214 (298)
T 3eoo_A 155 TFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAM--KTLDDYRRFKEA-----VKVPILANL 214 (298)
T ss_dssp TSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC--CSHHHHHHHHHH-----HCSCBEEEC
T ss_pred CeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCC--CCHHHHHHHHHH-----cCCCeEEEe
Confidence 45555443332 236888999999999999999976433 455666677776 458887754
No 480
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=33.61 E-value=83 Score=32.97 Aligned_cols=93 Identities=16% Similarity=0.272 Sum_probs=61.1
Q ss_pred cCCCCceEEE-eccCC--CC-CCHHHHHHHHHHHHHcCCCEEEEecCC----------H-HHHHHHHHHHHhhccCCcCc
Q 005248 98 IGSEHPIRVQ-TMTTN--DT-KDVAGTVEEVMRIADQGADLVRITVQG----------K-READACFEIKNSLVQKNYNI 162 (706)
Q Consensus 98 IGG~~PI~VQ-SMt~t--~T-~Dv~atv~Qi~~L~~aGceiVRvtv~~----------~-~~A~al~~I~~~L~~~g~~i 162 (706)
+|.+-||.|= |-... .. .+.+.+++-+++|+++|++++=++..+ . -..+.++.||+. +++
T Consensus 222 vg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-----~~i 296 (363)
T 3l5l_A 222 WPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRRE-----AKL 296 (363)
T ss_dssp SCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-----HTC
T ss_pred cCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHH-----cCC
Confidence 4556677652 21111 11 346778888999999999999888521 1 134556777775 579
Q ss_pred ceeeccCC-CHHHHHHHhhh--cCceeeCCCCCCcc
Q 005248 163 PLVADIHF-APSVALRVAEC--FDKIRVNPGNFADR 195 (706)
Q Consensus 163 PLVADIHF-~~~~Al~a~~~--~~kiRINPGNig~~ 195 (706)
|+++---+ ++..|.++++. +|-|=+-=+-+.++
T Consensus 297 PVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanP 332 (363)
T 3l5l_A 297 PVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADP 332 (363)
T ss_dssp CEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCT
T ss_pred cEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCc
Confidence 99998776 69999888874 77776544444443
No 481
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=33.54 E-value=2.1e+02 Score=27.11 Aligned_cols=137 Identities=10% Similarity=0.090 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHH-HHHHHHHHhhccCCcCcceee--------c-cCC-----CHHHHHHHhh
Q 005248 116 DVAGTVEEVMRIADQGADLVRITVQGKREA-DACFEIKNSLVQKNYNIPLVA--------D-IHF-----APSVALRVAE 180 (706)
Q Consensus 116 Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A-~al~~I~~~L~~~g~~iPLVA--------D-IHF-----~~~~Al~a~~ 180 (706)
|.+...+++..|...+++-+=+...+..+. +.++.+++ ..+|+|. + ..+ |+..+..+++
T Consensus 43 ~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~------~~iPvV~~~~~~~~~~~~~~~V~~D~~~~~~~~~~ 116 (290)
T 2fn9_A 43 DTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKE------AGIPVFCVDRGINARGLAVAQIYSDNYYGGVLAGE 116 (290)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHHH------TTCCEEEESSCCSCSSSSSEEEEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHH------CCCeEEEEecCCCCCCceEEEEeCCHHHHHHHHHH
Q ss_pred h-cCc------------eeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHc-CCeEEEecCCCCCc--
Q 005248 181 C-FDK------------IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY-GRAVRIGTNHGSLS-- 244 (706)
Q Consensus 181 ~-~~k------------iRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~-~~~IRIGvN~GSL~-- 244 (706)
+ +++ |=+--|.-..... ++++.-+.+.++++ |+.+ +.+-.|..+
T Consensus 117 ~L~~~~g~~~~G~r~i~i~~l~g~~~~~~~-------------------~~R~~gf~~~l~~~~g~~~-~~~~~~~~~~~ 176 (290)
T 2fn9_A 117 YFVKFLKEKYPDAKEIPYAELLGILSAQPT-------------------WDRSNGFHSVVDQYPEFKM-VAQQSAEFDRD 176 (290)
T ss_dssp HHHHHHHHHCSSCSCEEEEEEECCTTCHHH-------------------HHHHHHHHHHHTTSTTEEE-EEEEECTTCHH
T ss_pred HHHHHhcccCCcccceeEEEEEcCCCCchH-------------------HHHHHHHHHHHHhCCCCEE-EEeccCCCCHH
Q ss_pred ------hhHHHhhCCChHHHH----HHHHHHHHHHHHCCCCcEEE
Q 005248 245 ------DRIMSYYGDSPRGMV----ESAFEFARICRKLDFHNFLF 279 (706)
Q Consensus 245 ------~~il~rygdt~eamV----eSAle~~~i~e~~~f~~ivi 279 (706)
+++++++ +.|.+++ ..|+..++.|++.|++||.|
T Consensus 177 ~~~~~~~~ll~~~-~~~~ai~~~~d~~a~g~~~al~~~g~~dv~v 220 (290)
T 2fn9_A 177 TAYKVTEQILQAH-PEIKAIWCGNDAMALGAMKACEAAGRTDIYI 220 (290)
T ss_dssp HHHHHHHHHHHHC-TTCCEEEESSHHHHHHHHHHHHHTTCTTCEE
T ss_pred HHHHHHHHHHHhC-CCCcEEEECCchHHHHHHHHHHHCCCCCeEE
No 482
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=33.15 E-value=66 Score=35.03 Aligned_cols=71 Identities=14% Similarity=0.163 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHcCCCEEEEec-C---------------CHHHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh
Q 005248 119 GTVEEVMRIADQGADLVRITV-Q---------------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC 181 (706)
Q Consensus 119 atv~Qi~~L~~aGceiVRvtv-~---------------~~~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~ 181 (706)
.|.++++++.++|++.|-+.. + .......++++++. +++|++||-=. ++.-+.+|+..
T Consensus 305 ~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~-----~~ipVia~GGI~~~~di~kala~ 379 (514)
T 1jcn_A 305 VTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARR-----FGVPIIADGGIQTVGHVVKALAL 379 (514)
T ss_dssp CSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGG-----GTCCEEEESCCCSHHHHHHHHHT
T ss_pred chHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhh-----CCCCEEEECCCCCHHHHHHHHHc
Confidence 356788999999999999854 1 12333444555543 67999998655 35666666664
Q ss_pred -cCceeeCCCCCCc
Q 005248 182 -FDKIRVNPGNFAD 194 (706)
Q Consensus 182 -~~kiRINPGNig~ 194 (706)
++.|=|-=.-+++
T Consensus 380 GAd~V~iG~~~l~~ 393 (514)
T 1jcn_A 380 GASTVMMGSLLAAT 393 (514)
T ss_dssp TCSEEEESTTTTTS
T ss_pred CCCeeeECHHHHcC
Confidence 7777665444444
No 483
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=33.13 E-value=22 Score=38.08 Aligned_cols=49 Identities=18% Similarity=0.209 Sum_probs=35.6
Q ss_pred CCHHHHHH----HHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCc--Ccceee
Q 005248 115 KDVAGTVE----EVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNY--NIPLVA 166 (706)
Q Consensus 115 ~Dv~atv~----Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~--~iPLVA 166 (706)
-|-++|++ |....++||||+|= --||=+ -.+..||+.|++.|+ ++|+++
T Consensus 152 V~ND~Tl~~Lak~Als~A~AGAdiVA--PSdMMD-GrV~aIR~aLd~~G~~~~v~Ims 206 (342)
T 1h7n_A 152 INRERSVSRLAAVAVNYAKAGAHCVA--PSDMID-GRIRDIKRGLINANLAHKTFVLS 206 (342)
T ss_dssp BCHHHHHHHHHHHHHHHHHHTCSEEE--ECCCCT-THHHHHHHHHHHTTCTTTCEEEE
T ss_pred CccHHHHHHHHHHHHHHHHcCCCeee--cccccc-cHHHHHHHHHHHCCCccCceEee
Confidence 46666665 45556999999983 223322 357889999999999 599987
No 484
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=32.89 E-value=46 Score=34.38 Aligned_cols=103 Identities=11% Similarity=0.085 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCCH---HHHHHHhhhcCceeeCCCC
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAP---SVALRVAECFDKIRVNPGN 191 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~---~~Al~a~~~~~kiRINPGN 191 (706)
.|.+..++++.++.+ |...+.+-+-..++.+.++.||+. .+++|..|-|-.+ .-|+..++.++.++|
T Consensus 133 ~~~e~~~~~a~~~~~-g~~~~K~Kvg~~~d~~~v~avR~~-----~~~~l~vDaN~~~t~~~~A~~~~~~l~~~~i---- 202 (338)
T 3ijl_A 133 DTPDVVRAKTKECAG-LFNILKVKLGRDNDKEMIETIRSV-----TDLPIAVDANQGWKDRQYALDMIHWLKEKGI---- 202 (338)
T ss_dssp CCHHHHHHHHHHHHT-TCSSEEEECSSSCHHHHHHHHHTT-----CCCCEEEECTTCCCCHHHHHHHHHHHHHTTE----
T ss_pred CCHHHHHHHHHHHHh-cccEEEEecCcHHHHHHHHHHHhh-----cCCcEEEECcCCCCCHHHHHHHHHHHhhCCC----
Confidence 478899999999876 899999988777788889999885 4579999988655 446666666665432
Q ss_pred CCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCc
Q 005248 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS 244 (706)
Q Consensus 192 ig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~ 244 (706)
-- ||+-.- .+.+..+-+.+++.++||=.|=+.-++.
T Consensus 203 -~~----iEeP~~------------~~d~~~~~~l~~~~~ipIa~dE~~~~~~ 238 (338)
T 3ijl_A 203 -VM----IEQPMP------------KEQLDDIAWVTQQSPLPVFADESLQRLG 238 (338)
T ss_dssp -EE----EECCSC------------TTCHHHHHHHHHTCSSCEEESTTCCSGG
T ss_pred -CE----EECCCC------------CCcHHHHHHHHhcCCCCEEECCCCCCHH
Confidence 11 222110 0123345556667788886665555543
No 485
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=32.84 E-value=30 Score=35.80 Aligned_cols=140 Identities=15% Similarity=0.240 Sum_probs=84.2
Q ss_pred cCCCCceEEEecc--CCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccC-----CcCcceee----
Q 005248 98 IGSEHPIRVQTMT--TNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQK-----NYNIPLVA---- 166 (706)
Q Consensus 98 IGG~~PI~VQSMt--~t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~-----g~~iPLVA---- 166 (706)
|||+ -+.|+||. +.|..+.+.+-.++++|.+| |+|=..=.+.+ .-+.++.+.+.+. .-.++++.
T Consensus 48 I~Gd-~v~V~~Lv~pg~dPH~yeptp~d~~~l~~A--Dlvv~nG~~lE--~wl~k~~~~~~~~~~v~~s~gi~~~~~~~~ 122 (307)
T 3ujp_A 48 VAGD-KLVVESITRIGAEIHGYEPTPSDIVKAQDA--DLILYNGMNLE--RWFEQFLGNVKDVPSVVLTEGIEPIPIADG 122 (307)
T ss_dssp HHTT-SSEEEESSCSSCCSSSCCCCHHHHHHHHHC--SEEEECCTTSS--TTHHHHHHTSCSCCEEETTTTCCCCBCCSS
T ss_pred HcCC-ceEEEEcCCCCCCCcccCCCHHHHHHHhcC--CEEEEcCCChH--HHHHHHHHhCCCCCEEEeeCCccccccccc
Confidence 5665 58899995 56889999999999999986 56544434444 3455555543110 00111111
Q ss_pred ------c--cCCCHHHHHHHhhh-cCce-eeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEE
Q 005248 167 ------D--IHFAPSVALRVAEC-FDKI-RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (706)
Q Consensus 167 ------D--IHF~~~~Al~a~~~-~~ki-RINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRI 236 (706)
| +.++|..+...++. .+.+ ++.|.|=.. |+.- -+.|.++|+.++++++..+..+...++.+
T Consensus 123 ~~~~~~DPHvWldp~n~~~~a~~I~~~L~~~DP~~a~~----Y~~N---a~~~~~~L~~Ld~~~~~~l~~~p~~~~~~-- 193 (307)
T 3ujp_A 123 PYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAKY----YNAN---AAVYSEQLKAIDRQLGADLEQVPANQRFL-- 193 (307)
T ss_dssp SSTTSBCCCCTTCHHHHHHHHHHHHHHHHHHCGGGHHH----HHHH---HHHHHHHHHHHHHHHHHHHSSSCGGGCEE--
T ss_pred cCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCchhHHH----HHHH---HHHHHHHHHHHHHHHHHHHhhccccCCEE--
Confidence 2 33567777766654 3322 478876322 1111 25699999999999888877664444433
Q ss_pred ecCCCCCchhHHHhhC
Q 005248 237 GTNHGSLSDRIMSYYG 252 (706)
Q Consensus 237 GvN~GSL~~~il~ryg 252 (706)
=+.|.++ ..+.++||
T Consensus 194 v~~H~af-~Yfa~~yG 208 (307)
T 3ujp_A 194 VSCEGAF-SYLARDYG 208 (307)
T ss_dssp EEEESTT-HHHHHHTT
T ss_pred EEECchH-HHHHHHCC
Confidence 4667766 44556665
No 486
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=32.78 E-value=89 Score=32.56 Aligned_cols=77 Identities=17% Similarity=0.091 Sum_probs=56.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--------H--HHHHHHHHHHHhhccCCcCcceeeccCC-CHHHHHHHhhh--
Q 005248 115 KDVAGTVEEVMRIADQGADLVRITVQG--------K--READACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-- 181 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~aGceiVRvtv~~--------~--~~A~al~~I~~~L~~~g~~iPLVADIHF-~~~~Al~a~~~-- 181 (706)
.+.+.+++-+++|+++|++++=|+... . -..+.+..||+. +++|+++---+ ++..|.++++.
T Consensus 226 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~-----~~iPVi~~GgI~s~e~a~~~L~~G~ 300 (340)
T 3gr7_A 226 LTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRRE-----ADIPTGAVGLITSGWQAEEILQNGR 300 (340)
T ss_dssp CCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-----TTCCEEEESSCCCHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHH-----cCCcEEeeCCCCCHHHHHHHHHCCC
Confidence 456778889999999999999887421 1 134566778875 57999886654 68899988874
Q ss_pred cCceeeCCCCCCcch
Q 005248 182 FDKIRVNPGNFADRR 196 (706)
Q Consensus 182 ~~kiRINPGNig~~~ 196 (706)
+|.|=|.=+.+.+++
T Consensus 301 aD~V~iGR~~lanPd 315 (340)
T 3gr7_A 301 ADLVFLGRELLRNPY 315 (340)
T ss_dssp CSEEEECHHHHHCTT
T ss_pred eeEEEecHHHHhCch
Confidence 888877666665544
No 487
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=32.76 E-value=43 Score=33.91 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCc-Ccceee
Q 005248 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNY-NIPLVA 166 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~-~iPLVA 166 (706)
+-+.+-+..|.++||+.+=|++++.-. -++..+++. + ++|+|.
T Consensus 56 ~~~~~~~~~L~~~g~~~iVIACNTa~~-~al~~lr~~-----~~~iPvig 99 (268)
T 3out_A 56 KFAAQTAKFLIDQEVKAIIIACNTISA-IAKDIVQEI-----AKAIPVID 99 (268)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCHHHHH-HHHHHHHHH-----HTTSCEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCChHH-HHHHHHHHh-----cCCCCEEe
Confidence 344566778999999999999999754 578889986 6 799983
No 488
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=32.76 E-value=1.1e+02 Score=33.12 Aligned_cols=47 Identities=13% Similarity=0.113 Sum_probs=36.7
Q ss_pred HHHHHHHHHHcCCCEEEE-ecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC
Q 005248 120 TVEEVMRIADQGADLVRI-TVQGKREADACFEIKNSLVQKNYNIPLVADIHFA 171 (706)
Q Consensus 120 tv~Qi~~L~~aGceiVRv-tv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~ 171 (706)
--+|+..|.++|+|++=+ |.++..+|+++-+..+ + ..+|+++=+-|+
T Consensus 141 ~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~---~--~~lPv~iS~T~~ 188 (406)
T 1lt8_A 141 FLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLI---A--SGKPVAATMAIG 188 (406)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHG---G--GTSCEEEEECCB
T ss_pred HHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHH---H--hCCcEEEEEEEC
Confidence 356899999999999988 5899999988854433 3 348998887775
No 489
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=32.75 E-value=1.1e+02 Score=30.30 Aligned_cols=141 Identities=12% Similarity=0.144 Sum_probs=81.6
Q ss_pred ccCCCCCCHHHHHHHHHHHHHcC--CCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC--HH----HHHHHhh
Q 005248 109 MTTNDTKDVAGTVEEVMRIADQG--ADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PS----VALRVAE 180 (706)
Q Consensus 109 Mt~t~T~Dv~atv~Qi~~L~~aG--ceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~----~Al~a~~ 180 (706)
+-.-|..+.+. ++..+.++| ++++-+-++=.. +.-. .+.+.|++. ..+++.|.|+- |+ .+..+++
T Consensus 18 ilalD~~~l~~---~~~~~~~~~~~v~~~Kv~~d~~~-~~G~-~~v~~lr~~--~~~v~lD~kl~Dip~t~~~~i~~~~~ 90 (245)
T 1eix_A 18 VVALDYHNRDD---ALAFVDKIDPRDCRLKVGKEMFT-LFGP-QFVRELQQR--GFDIFLDLKFHDIPNTAAHAVAAAAD 90 (245)
T ss_dssp EEEECCSSHHH---HHHHHTTSCTTTCEEEEEHHHHH-HHHH-HHHHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHH
T ss_pred EEEECCCCHHH---HHHHHHHhCccCcEEEEcHHHHH-HhCH-HHHHHHHHC--CCcEEEEeeccccHHHHHHHHHHHHh
Confidence 33445556654 344444566 678555544332 2222 223335544 46788899997 44 3335556
Q ss_pred h-cCceeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCC--eEEEecCC-CCCchhHHHhhCCChH
Q 005248 181 C-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNH-GSLSDRIMSYYGDSPR 256 (706)
Q Consensus 181 ~-~~kiRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~--~IRIGvN~-GSL~~~il~rygdt~e 256 (706)
+ +|-|=++|-- |. +-+.++++.++++|. +-=|||+- =|.+..-++.+|-+ .
T Consensus 91 ~Gad~vTvH~~~-g~-----------------------~~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~-~ 145 (245)
T 1eix_A 91 LGVWMVNVHASG-GA-----------------------RMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMT-L 145 (245)
T ss_dssp HTCSEEEEBGGG-CH-----------------------HHHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCC-S
T ss_pred CCCCEEEEeccC-CH-----------------------HHHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccC-C
Confidence 5 7888887731 11 135678889998886 42357764 24555667777521 1
Q ss_pred HHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 257 GMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 257 amVeSAle~~~i~e~~~f~~iviS~ 281 (706)
.+++..+...+...+.|+.-+|.|.
T Consensus 146 ~~~d~Vl~ma~~~~~~G~~g~V~~~ 170 (245)
T 1eix_A 146 SPADYAERLAALTQKCGLDGVVCSA 170 (245)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEECCG
T ss_pred CHHHHHHHHHHHHHHcCCCeEEeCH
Confidence 2345556666667889998877765
No 490
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=32.64 E-value=3.1e+02 Score=30.75 Aligned_cols=144 Identities=17% Similarity=0.247 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHcCCCEEEE-ecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC----------HHHHHHHhhh--cCc
Q 005248 118 AGTVEEVMRIADQGADLVRI-TVQGKREADACFEIKNSLVQKNYNIPLVADIHFA----------PSVALRVAEC--FDK 184 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRv-tv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~----------~~~Al~a~~~--~~k 184 (706)
+.--+|+..|.++|+|++=+ |.|+..+|++.-..-++. ..++|++.=+-|+ ..-+..+++. ++.
T Consensus 126 ~~~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~---~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~~~~~a 202 (566)
T 1q7z_A 126 ENFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREV---SRDVFLIAHMTFDEKGRSLTGTDPANFAITFDELDIDA 202 (566)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHH---CSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHTSSCSE
T ss_pred HHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHh---CCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhccCCCE
Confidence 34467999999999999988 588999998766554432 1368999887774 2223333332 444
Q ss_pred eeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHc-CCeEEEecCCCCCc--hhHHHhhCCChHHHHHH
Q 005248 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY-GRAVRIGTNHGSLS--DRIMSYYGDSPRGMVES 261 (706)
Q Consensus 185 iRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~-~~~IRIGvN~GSL~--~~il~rygdt~eamVeS 261 (706)
|=+|=+ .|. +.+.++++..++. ++|+=+=-|.|.-. +. ...|-.+|+.|.+.
T Consensus 203 vG~NC~-~gp-----------------------~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~-~~~~~~~p~~~a~~ 257 (566)
T 1q7z_A 203 LGINCS-LGP-----------------------EEILPIFQELSQYTDKFLVVEPNAGKPIVENG-KTVYPLKPHDFAVH 257 (566)
T ss_dssp EEEESS-SCH-----------------------HHHHHHHHHHHHTCCSEEEEECCSSSCEEETT-EEECCCCHHHHHTT
T ss_pred EEEeCC-CCH-----------------------HHHHHHHHHHHhcCCCEEEEEcCCCCCcccCC-ccccCCCHHHHHHH
Confidence 555443 111 1455566655553 67775566888431 21 12465688888766
Q ss_pred HHHHHHHHHHCCCCcEEEEEecCChhHHHHHHHH
Q 005248 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRL 295 (706)
Q Consensus 262 Ale~~~i~e~~~f~~iviS~KaSnv~~~i~ayrl 295 (706)
+.+++ +.| =+|+==|=-+++. =|++.+.
T Consensus 258 ~~~~~----~~G-~~iiGGCCGTtP~-hI~aia~ 285 (566)
T 1q7z_A 258 IDSYY----ELG-VNIFGGCCGTTPE-HVKLFRK 285 (566)
T ss_dssp HHHHH----HTT-CSEECCCTTCCHH-HHHHHHH
T ss_pred HHHHH----HcC-CcEEccccCCCHH-HHHHHHH
Confidence 66654 456 5555555456554 4555433
No 491
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=32.55 E-value=1.7e+02 Score=31.69 Aligned_cols=154 Identities=17% Similarity=0.203 Sum_probs=92.0
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEEecCC---HHHHHHHHHHHHhhccCCcCcceeeccCCC--HHHHHHHhhhcCceeeC
Q 005248 115 KDVAGTVEEVMRIADQ-GADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDKIRVN 188 (706)
Q Consensus 115 ~Dv~atv~Qi~~L~~a-GceiVRvtv~~---~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~Al~a~~~~~kiRIN 188 (706)
.+.+..++|++++.++ |...+.+-+-. .++.+.++.||+.+ -+++|..|.|-. +.-|+..++.++.+ |
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~----~~~~L~vDaN~~w~~~~Ai~~~~~L~~~-l- 263 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAF----PGVPLRLDPNAAWTVETSKWVAKELEGI-V- 263 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHS----TTCCEEEECTTCBCHHHHHHHHHHTTTT-C-
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC----CCCcEeeeCCCCCCHHHHHHHHHHHhhh-c-
Confidence 6789999999998875 99999998744 67788899999875 258999998865 45555555556654 2
Q ss_pred CCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCch--hHHHhhC-C--ChH----HHH
Q 005248 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD--RIMSYYG-D--SPR----GMV 259 (706)
Q Consensus 189 PGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~--~il~ryg-d--t~e----amV 259 (706)
-- ||+-. . .+..+.+.++..++||=.|=+.-++.+ ++++.-. | .++ |=+
T Consensus 264 ----~~----iEeP~-~-------------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGi 321 (445)
T 3va8_A 264 ----EY----LEDPA-G-------------EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGL 321 (445)
T ss_dssp ----SE----EESCB-S-------------HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSH
T ss_pred ----Ce----EeecC-c-------------CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCH
Confidence 11 23221 1 123344445556777755544444433 2333211 2 121 215
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEecC-ChhHHHHHHHHHHHh
Q 005248 260 ESAFEFARICRKLDFHNFLFSMKAS-NPVVMVQAYRLLVAE 299 (706)
Q Consensus 260 eSAle~~~i~e~~~f~~iviS~KaS-nv~~~i~ayrlla~~ 299 (706)
..+++-+++|+..|.. +++=+. ...+...|+-.|+.-
T Consensus 322 tea~kia~lA~~~gv~---v~~h~~~e~~I~~aa~~hlaaa 359 (445)
T 3va8_A 322 RKSQTLASICATWGLR---LSMHSNSHLGISLAAMTHLASA 359 (445)
T ss_dssp HHHHHHHHHHHHHTCE---EEECCCSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCE---EEEeCCcccHHHHHHHHHHHHh
Confidence 5568888888888874 343332 234455555555543
No 492
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=32.35 E-value=1.1e+02 Score=29.49 Aligned_cols=65 Identities=17% Similarity=0.162 Sum_probs=42.5
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHH-------HHHcCCCEEEEecCCHHHHHHH-HHHHHhhccCCcCcceeecc
Q 005248 101 EHPIRVQTMTTNDTKDVAGTVEEVMR-------IADQGADLVRITVQGKREADAC-FEIKNSLVQKNYNIPLVADI 168 (706)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~~-------L~~aGceiVRvtv~~~~~A~al-~~I~~~L~~~g~~iPLVADI 168 (706)
..++++=+-..+-|- -|..|+.+ +.+.|+++|=|++.+.+..++. +.|++.+.+.+++.|+++|-
T Consensus 31 k~~vvL~f~~a~~cp---~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~ 103 (220)
T 1xcc_A 31 NSWAILFSHPNDFTP---VCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDE 103 (220)
T ss_dssp TSEEEEECCSCTTCH---HHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECT
T ss_pred CCeEEEEEECCCCCC---CCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECc
Confidence 346666665444432 33333333 3456999999999988765553 45666555678999999995
No 493
>4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A
Probab=32.28 E-value=78 Score=34.92 Aligned_cols=52 Identities=19% Similarity=0.444 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCC-ChHHHHHHHHHHHHHHHH
Q 005248 220 FSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRK 271 (706)
Q Consensus 220 f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygd-t~eamVeSAle~~~i~e~ 271 (706)
...||+.|+++|+-.=|-..|-.|+..+..+||. ....+|+-=.++++.|-+
T Consensus 98 Y~~lid~l~~~gI~p~vtL~H~dlP~~L~~~yGGW~nr~~vd~F~~YA~~~f~ 150 (479)
T 4b3l_A 98 YNRVIDACLANGIRPVINLHHFDLPIALYQAYGGWESKHVVDLFVAFSKVCFE 150 (479)
T ss_dssp HHHHHHHHHHHTCEEEEESCSSCCBHHHHHHHCGGGCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEeeEEecCCCcCHHHHHhcCCcCCHHHHHHHHHHHHHHHH
Confidence 4569999999999999999999999999999985 667899988899987754
No 494
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=32.20 E-value=47 Score=34.49 Aligned_cols=60 Identities=13% Similarity=0.241 Sum_probs=41.9
Q ss_pred CceEEEeccCCC-CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeecc
Q 005248 102 HPIRVQTMTTND-TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168 (706)
Q Consensus 102 ~PI~VQSMt~t~-T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADI 168 (706)
-+.+||-=|... ..+++.+++..+++++|||+.|=+-.. .+.+.+++|.+. +++|+++.+
T Consensus 150 ~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~--~~~~~~~~i~~~-----~~iP~~~N~ 210 (295)
T 1xg4_A 150 PDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAI--TELAMYRQFADA-----VQVPILANI 210 (295)
T ss_dssp TTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEETTC--CSHHHHHHHHHH-----HCSCBEEEC
T ss_pred CCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCC--CCHHHHHHHHHH-----cCCCEEEEe
Confidence 467788655432 345689999999999999999877432 234445566665 458997754
No 495
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=32.19 E-value=2e+02 Score=27.48 Aligned_cols=56 Identities=14% Similarity=0.024 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHcCCeEEEec------CCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 005248 219 VFSPLVEKCKKYGRAVRIGT------NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (706)
Q Consensus 219 ~f~~vv~~ake~~~~IRIGv------N~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~ 281 (706)
.+.++.+.++++|+.+-... |.+|.++.. -+..++...+.+++|.++|-..|++++
T Consensus 48 ~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~-------r~~~~~~~~~~i~~a~~lG~~~v~~~~ 109 (290)
T 2qul_A 48 KKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSV-------RDAGTEYVKRLLDDCHLLGAPVFAGLT 109 (290)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHH-------HHHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred hHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHH-------HHHHHHHHHHHHHHHHHcCCCEEEeec
Confidence 45667788999999876521 222222211 145678888899999999999998765
No 496
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=32.08 E-value=1.6e+02 Score=28.95 Aligned_cols=133 Identities=17% Similarity=0.204 Sum_probs=71.2
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhhccCCcCcceeeccCCC--HHH----HHHHhhh-cCc
Q 005248 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PSV----ALRVAEC-FDK 184 (706)
Q Consensus 112 t~T~Dv~atv~Qi~~L~~aGceiVRvtv~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~--~~~----Al~a~~~-~~k 184 (706)
-|..|.+..++-+.++. -.++.+-+-.+-.. +.- +.+.+.|++. ...++++|.||. |+- +..+++. +|-
T Consensus 19 lD~~~~~~a~~~v~~~~-~~v~~~Kvg~~lf~-~~G-~~~v~~l~~~-~g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~ 94 (228)
T 3m47_A 19 MDLMNRDDALRVTGEVR-EYIDTVKIGYPLVL-SEG-MDIIAEFRKR-FGCRIIADFKVADIPETNEKICRATFKAGADA 94 (228)
T ss_dssp CCCCSHHHHHHHHHTTT-TTCSEEEEEHHHHH-HHC-THHHHHHHHH-HCCEEEEEEEECSCHHHHHHHHHHHHHTTCSE
T ss_pred eCCCCHHHHHHHHHHcC-CcccEEEEcHHHHH-hcC-HHHHHHHHhc-CCCeEEEEEeecccHhHHHHHHHHHHhCCCCE
Confidence 45666665555444431 11567776432221 111 1222234331 246889999997 653 3334454 777
Q ss_pred eeeCCCCCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhCCChHHHHHHHHH
Q 005248 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264 (706)
Q Consensus 185 iRINPGNig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~rygdt~eamVeSAle 264 (706)
+=++| ++.. +-++++++.++++|..+=+ ++.-|=.. ..+ . +-+-+.+
T Consensus 95 vtvh~--~~G~----------------------~~l~~~~~~~~~~g~~v~v-Lt~~s~~~-~~~----~---~~~~~~~ 141 (228)
T 3m47_A 95 IIVHG--FPGA----------------------DSVRACLNVAEEMGREVFL-LTEMSHPG-AEM----F---IQGAADE 141 (228)
T ss_dssp EEEES--TTCH----------------------HHHHHHHHHHHHHTCEEEE-ECCCCSGG-GGT----T---HHHHHHH
T ss_pred EEEec--cCCH----------------------HHHHHHHHHHHhcCCCeEE-EEeCCCcc-HHH----H---HHHHHHH
Confidence 77776 2221 2567788888888864311 22222111 000 0 1134567
Q ss_pred HHHHHHHCCCCcEEEEE
Q 005248 265 FARICRKLDFHNFLFSM 281 (706)
Q Consensus 265 ~~~i~e~~~f~~iviS~ 281 (706)
.++++.+.|++-+|.|.
T Consensus 142 ~a~~a~~~G~~GvV~~a 158 (228)
T 3m47_A 142 IARMGVDLGVKNYVGPS 158 (228)
T ss_dssp HHHHHHHTTCCEEECCS
T ss_pred HHHHHHHhCCcEEEECC
Confidence 78899999999888775
No 497
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=31.93 E-value=1.2e+02 Score=29.61 Aligned_cols=109 Identities=17% Similarity=0.133 Sum_probs=62.3
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCCCE--EEEe----cCCHHH-HHHHHHHHHhhccCCcCcceeeccC-CCH-HHH
Q 005248 105 RVQTMTTNDTKDVAGTVEEVMRIADQGADL--VRIT----VQGKRE-ADACFEIKNSLVQKNYNIPLVADIH-FAP-SVA 175 (706)
Q Consensus 105 ~VQSMt~t~T~Dv~atv~Qi~~L~~aGcei--VRvt----v~~~~~-A~al~~I~~~L~~~g~~iPLVADIH-F~~-~~A 175 (706)
..=|++..| .....++++++.++|+++ +|+. +|+... .+.++.||+. ++.|+.+++= .|| +..
T Consensus 7 i~psila~D---~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~-----~~~~~~vhlmv~dp~~~i 78 (230)
T 1tqj_A 7 VAPSILSAD---FSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL-----TKKTLDVHLMIVEPEKYV 78 (230)
T ss_dssp EEEBGGGSC---GGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGG-----CCSEEEEEEESSSGGGTH
T ss_pred EEEEeeecC---HhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhh-----cCCcEEEEEEccCHHHHH
Confidence 345777766 555567888899999998 5664 232211 1444555542 3456544421 233 233
Q ss_pred HHHhhh-cCceeeCCC--CCCcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchh
Q 005248 176 LRVAEC-FDKIRVNPG--NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246 (706)
Q Consensus 176 l~a~~~-~~kiRINPG--Nig~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~ 246 (706)
..|+++ +|-|=+-.. .. + ...++++.++++|+.+=+-+|-.+..++
T Consensus 79 ~~~~~aGadgv~vh~e~~~~-~------------------------~~~~~~~~i~~~g~~~gv~~~p~t~~e~ 127 (230)
T 1tqj_A 79 EDFAKAGADIISVHVEHNAS-P------------------------HLHRTLCQIRELGKKAGAVLNPSTPLDF 127 (230)
T ss_dssp HHHHHHTCSEEEEECSTTTC-T------------------------THHHHHHHHHHTTCEEEEEECTTCCGGG
T ss_pred HHHHHcCCCEEEECcccccc-h------------------------hHHHHHHHHHHcCCcEEEEEeCCCcHHH
Confidence 455555 776655443 21 1 2346889999999876555555554443
No 498
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=31.91 E-value=3.1e+02 Score=29.38 Aligned_cols=51 Identities=10% Similarity=-0.001 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHcC-CeEEEecC--CCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCC
Q 005248 219 VFSPLVEKCKKYG-RAVRIGTN--HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFH 275 (706)
Q Consensus 219 ~f~~vv~~ake~~-~~IRIGvN--~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~ 275 (706)
.+.++++.+++.+ +.+ .|+- -||-..+. +. -...++.+.+.++.+++.|+.
T Consensus 199 e~~~ll~~~~~~~~l~l-~Glh~H~gs~~~d~-~~----~~~a~~~~~~l~~~l~~~G~~ 252 (443)
T 3vab_A 199 KARAAYARAASLPGLNV-VGIDMHIGSQIIDL-EP----FDNAFALMAELVKELQADGHN 252 (443)
T ss_dssp GHHHHHHHHHHSTTEEE-EEEECCCCSSBCCS-HH----HHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhhCCCceE-EEEEEeccCCCCCH-HH----HHHHHHHHHHHHHHHHHcCCC
Confidence 4556777787764 332 3553 26532110 00 123445555666666666663
No 499
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=31.80 E-value=1.4e+02 Score=28.99 Aligned_cols=81 Identities=11% Similarity=-0.022 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHcCCeEE-Ee------cCCCCCchhHHHhhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEecC-------
Q 005248 219 VFSPLVEKCKKYGRAVR-IG------TNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKAS------- 284 (706)
Q Consensus 219 ~f~~vv~~ake~~~~IR-IG------vN~GSL~~~il~rygdt~eamVeSAle~~~i~e~~~f~~iviS~KaS------- 284 (706)
.+..+.+.++++|+.+- +. .|.+|.++.. -+..++...+.+++|.++|-..|++.--..
T Consensus 67 ~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~-------r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~ 139 (295)
T 3cqj_A 67 QRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAV-------RAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANN 139 (295)
T ss_dssp HHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHH-------HHHHHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCH
T ss_pred HHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHH-------HHHHHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHH
Confidence 45667888999999875 22 1233433322 245678888999999999999888752110
Q ss_pred -ChhHHHHHHHHHHHhhhcCCCC
Q 005248 285 -NPVVMVQAYRLLVAEMYVHGWD 306 (706)
Q Consensus 285 -nv~~~i~ayrlla~~~~~eg~~ 306 (706)
....+++.++.+++...+.|..
T Consensus 140 ~~~~~~~~~l~~l~~~a~~~Gv~ 162 (295)
T 3cqj_A 140 ETRRRFRDGLKESVEMASRAQVT 162 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCE
Confidence 1134566666666665444443
No 500
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=31.73 E-value=51 Score=36.80 Aligned_cols=160 Identities=14% Similarity=0.106 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEe-cCCHHHHHHHHHHHHhhccCCcCcceeeccCCCHHHHHHHh----hhcCceeeCCCCC
Q 005248 118 AGTVEEVMRIADQGADLVRIT-VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA----ECFDKIRVNPGNF 192 (706)
Q Consensus 118 ~atv~Qi~~L~~aGceiVRvt-v~~~~~A~al~~I~~~L~~~g~~iPLVADIHF~~~~Al~a~----~~~~kiRINPGNi 192 (706)
+.-.+.|+...++|.|.|-+. |.+.++++.+.+ .|.+.+-+++++|=|-= ..|++.+ +.+|.|=|-||.+
T Consensus 193 ~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~---~l~~~~~~i~IiakIEt--~eav~nldeI~~~~DgImvgrgDL 267 (500)
T 1a3w_A 193 EKDKEDLRFGVKNGVHMVFASFIRTANDVLTIRE---VLGEQGKDVKIIVKIEN--QQGVNNFDEILKVTDGVMVARGDL 267 (500)
T ss_dssp HHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHH---HHHHHHTTSEEEEEECS--SHHHHSHHHHHHHSSEEEECHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHH---HHHhcCCCcEEEEEECC--hHHHHhHHHHHHhCCEEEECchHh
Confidence 455566777788899998776 556666655554 44445567999998833 3333222 2368888888877
Q ss_pred CcchhhccccccchHHHHHHHhhHHhhHHHHHHHHHHcCCeEEEecCCCCCchhHHHhhC--CChH-HHHHHHHHHHHHH
Q 005248 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG--DSPR-GMVESAFEFARIC 269 (706)
Q Consensus 193 g~~~k~F~~~~YtdeeY~~El~~I~~~f~~vv~~ake~~~~IRIGvN~GSL~~~il~ryg--dt~e-amVeSAle~~~i~ 269 (706)
|-.-. .+++....+.++.+|+++|+|+=+.+. +|+..- ++|. +=|- .+.-+
T Consensus 268 gvelg---------------~~~v~~aqk~ii~aaraaGkpvi~ATQ-------MLeSMi~~~~ptraEvs----dva~a 321 (500)
T 1a3w_A 268 GIEIP---------------APEVLAVQKKLIAKSNLAGKPVICATQ-------MLESMTYNPRPTRAEVS----DVGNA 321 (500)
T ss_dssp HHHTT---------------GGGHHHHHHHHHHHHHHHTCCEEECSS-------TTGGGGSCSSCCHHHHH----HHHHH
T ss_pred hhhcC---------------cHHHHHHHHHHHHHHHhcCCCEEEEee-------hhhhhccCCCchHHHHH----HHHHH
Confidence 64221 123445557899999999999733331 222221 2232 1111 22223
Q ss_pred HHCCCCcEEEEE---ecCChhHHHHHHHHHHHhhhcCCCCCcc
Q 005248 270 RKLDFHNFLFSM---KASNPVVMVQAYRLLVAEMYVHGWDYPL 309 (706)
Q Consensus 270 e~~~f~~iviS~---KaSnv~~~i~ayrlla~~~~~eg~~YPL 309 (706)
-..|++-+.+|- +-.-|...|+.-..++.+.++. .+|..
T Consensus 322 v~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~-~~~~~ 363 (500)
T 1a3w_A 322 ILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQA-IAYLP 363 (500)
T ss_dssp HHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTS-CCHHH
T ss_pred HHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhh-hhhhh
Confidence 346888888874 4445778888888888887652 44443
Done!